locus-tag	class	description
EQM13_RS00010	COG0592	DNA-directed DNA polymerase activity
EQM13_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EQM13_RS00030	COG0187	DNA topoisomerase II activity
EQM13_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EQM13_RS00040	COG1366	Belongs to the anti-sigma-factor antagonist family
EQM13_RS00050	COG1191	sigma factor activity
EQM13_RS00080	COG4187	Peptidase family M20/M25/M40
EQM13_RS00085	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EQM13_RS00135	COG0668	transmembrane transport
EQM13_RS00140	COG4481	Protein conserved in bacteria
EQM13_RS00145	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EQM13_RS00150	COG0360	Binds together with S18 to 16S ribosomal RNA
EQM13_RS00155	COG0629	single-stranded DNA binding
EQM13_RS00180	COG0359	binds to the 23S rRNA
EQM13_RS00185	COG0305	Participates in initiation and elongation during chromosome replication
EQM13_RS00205	COG1827	regulation of RNA biosynthetic process
EQM13_RS00215	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS00235	COG1136	(ABC) transporter
EQM13_RS00250	COG0642	Histidine kinase
EQM13_RS00300	COG2088	sporulation resulting in formation of a cellular spore
EQM13_RS00310	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EQM13_RS00405	COG0739	heme binding
EQM13_RS00495	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM13_RS00600	COG1846	Transcriptional regulator
EQM13_RS00640	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM13_RS00640	COG1918	ferrous iron import across plasma membrane
EQM13_RS00660	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EQM13_RS00685	COG4232	protein-disulfide reductase activity
EQM13_RS00690	COG0640	Transcriptional regulator
EQM13_RS00700	COG3775	system Galactitol-specific IIC component
EQM13_RS00705	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS00710	COG1063	alcohol dehydrogenase
EQM13_RS00715	COG0235	Class ii aldolase
EQM13_RS00725	COG0697	spore germination
EQM13_RS00745	COG0693	protein deglycase activity
EQM13_RS00745	COG0753	catalase activity
EQM13_RS00750	COG0745	RESPONSE REGULATOR receiver
EQM13_RS00755	COG5002	protein histidine kinase activity
EQM13_RS00760	COG1136	(ABC) transporter
EQM13_RS00775	COG0456	acetyltransferase
EQM13_RS00790	COG1968	undecaprenyl-diphosphatase activity
EQM13_RS00795	COG2267	carboxylic ester hydrolase activity
EQM13_RS00805	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
EQM13_RS00810	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
EQM13_RS00895	COG1394	ATPase activity, coupled to movement of substances
EQM13_RS00900	COG0714	Associated with various cellular activities
EQM13_RS00905	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EQM13_RS00925	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM13_RS00925	COG1918	ferrous iron import across plasma membrane
EQM13_RS00950	COG2217	Heavy metal translocating P-type atpase
EQM13_RS00960	COG1937	Protein conserved in bacteria
EQM13_RS00965	COG0542	response to heat
EQM13_RS01000	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EQM13_RS01020	COG0641	radical SAM
EQM13_RS01045	COG1132	(ABC) transporter
EQM13_RS01050	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EQM13_RS01055	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EQM13_RS01060	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EQM13_RS01140	COG3344	reverse transcriptase
EQM13_RS01250	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
EQM13_RS01265	COG3843	relaxase mobilization nuclease domain protein
EQM13_RS01325	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EQM13_RS01375	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EQM13_RS01380	COG0210	DNA helicase
EQM13_RS01420	COG0305	Participates in initiation and elongation during chromosome replication
EQM13_RS01430	COG1476	TRANSCRIPTIONal
EQM13_RS01495	COG0500	methyltransferase
EQM13_RS01525	COG0798	PFAM Bile acid sodium symporter
EQM13_RS01600	COG1396	sequence-specific DNA binding
EQM13_RS01625	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EQM13_RS01640	COG4555	ABC transporter
EQM13_RS01655	COG0312	modulator of DNA gyrase
EQM13_RS01660	COG1396	sequence-specific DNA binding
EQM13_RS01665	COG1396	sequence-specific DNA binding
EQM13_RS01670	COG4166	transmembrane transport
EQM13_RS01675	COG0601	transmembrane transport
EQM13_RS01680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM13_RS01685	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS01690	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS01715	COG3037	sugar-specific permease SgaT UlaA
EQM13_RS01730	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
EQM13_RS01745	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EQM13_RS01750	COG0022	dehydrogenase e1 component
EQM13_RS01755	COG3199	ATP-NAD kinase
EQM13_RS01760	COG0508	dehydrogenase complex catalyzes the overall conversion of
EQM13_RS01765	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EQM13_RS01775	COG1797	cobyrinic acid a,c-diamide synthase activity
EQM13_RS01790	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
EQM13_RS01835	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
EQM13_RS01840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EQM13_RS01850	COG0006	proline dipeptidase activity
EQM13_RS01865	COG4120	Belongs to the binding-protein-dependent transport system permease family
EQM13_RS01890	COG0747	negative chemotaxis
EQM13_RS01905	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS01910	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS01915	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM13_RS01920	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EQM13_RS01925	COG1228	amidohydrolase
EQM13_RS01935	COG3579	cysteine-type endopeptidase activity
EQM13_RS01950	COG2721	sulfolactate sulfo-lyase activity
EQM13_RS01970	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EQM13_RS01980	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EQM13_RS01995	COG1136	(ABC) transporter
EQM13_RS02020	COG1136	(ABC) transporter
EQM13_RS02030	COG1132	(ABC) transporter
EQM13_RS02060	COG1132	(ABC) transporter
EQM13_RS02080	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EQM13_RS02100	COG1136	(ABC) transporter
EQM13_RS02120	COG0666	response to abiotic stimulus
EQM13_RS02125	COG3711	transcriptional antiterminator
EQM13_RS02130	COG3964	amidohydrolase
EQM13_RS02195	COG1131	(ABC) transporter
EQM13_RS02215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS02215	COG3711	transcriptional antiterminator
EQM13_RS02225	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EQM13_RS02235	COG2723	6-phospho-beta-galactosidase activity
EQM13_RS02240	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EQM13_RS02245	COG1609	Transcriptional regulator
EQM13_RS02255	COG0697	spore germination
EQM13_RS02275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS02290	COG3775	system Galactitol-specific IIC component
EQM13_RS02300	COG1070	Carbohydrate kinase
EQM13_RS02315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS02330	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS02335	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS02340	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
EQM13_RS02390	COG0151	Belongs to the GarS family
EQM13_RS02395	COG0138	bifunctional purine biosynthesis protein purh
EQM13_RS02400	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EQM13_RS02405	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
EQM13_RS02410	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EQM13_RS02420	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
EQM13_RS02425	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EQM13_RS02435	COG1929	Belongs to the glycerate kinase type-1 family
EQM13_RS02470	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EQM13_RS02480	COG0745	RESPONSE REGULATOR receiver
EQM13_RS02485	COG2770	Histidine kinase
EQM13_RS02485	COG2205	protein histidine kinase activity
EQM13_RS02500	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EQM13_RS02505	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EQM13_RS02510	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EQM13_RS02525	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
EQM13_RS02530	COG2078	PFAM AMMECR1 domain protein
EQM13_RS02530	COG3885	ferrous iron binding
EQM13_RS02540	COG1982	Orn Lys Arg decarboxylase major
EQM13_RS02545	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EQM13_RS02550	COG3870	Protein conserved in bacteria
EQM13_RS02555	COG3870	Protein conserved in bacteria
EQM13_RS02560	COG0470	DNA polymerase III
EQM13_RS02565	COG1774	PSP1 C-terminal conserved region
EQM13_RS02570	COG2221	Nitrite and sulphite reductase 4Fe-4S
EQM13_RS02575	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EQM13_RS02580	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
EQM13_RS02585	COG2002	toxin-antitoxin pair type II binding
EQM13_RS02600	COG2715	membrane protein required for spore maturation
EQM13_RS02605	COG0700	Nucleoside recognition
EQM13_RS02610	COG3584	3D domain protein
EQM13_RS02615	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM13_RS02615	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM13_RS02620	COG0084	hydrolase, TatD family'
EQM13_RS02625	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
EQM13_RS02630	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EQM13_RS02640	COG0640	Transcriptional regulator
EQM13_RS02675	COG0489	protein tyrosine kinase activity
EQM13_RS02680	COG1619	proteins homologs of microcin C7 resistance protein MccF
EQM13_RS02685	COG1063	alcohol dehydrogenase
EQM13_RS02690	COG2390	Transcriptional regulator
EQM13_RS02720	COG2385	sporulation resulting in formation of a cellular spore
EQM13_RS02725	COG4466	Protein conserved in bacteria
EQM13_RS02730	COG1376	ErfK ybiS ycfS ynhG family protein
EQM13_RS02740	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EQM13_RS02745	COG0697	spore germination
EQM13_RS02750	COG0814	amino acid
EQM13_RS02770	COG2959	enzyme of heme biosynthesis
EQM13_RS02775	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
EQM13_RS02780	COG3829	transcription factor binding
EQM13_RS02785	COG0604	alcohol dehydrogenase
EQM13_RS02800	COG1193	negative regulation of DNA recombination
EQM13_RS02805	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EQM13_RS02810	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM13_RS02840	COG3409	Peptidoglycan-binding domain 1 protein
EQM13_RS02840	COG0793	Belongs to the peptidase S41A family
EQM13_RS02890	COG1737	Transcriptional regulator
EQM13_RS02895	COG3715	PTS system
EQM13_RS02900	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS02910	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
EQM13_RS02930	COG4412	M6 family metalloprotease domain protein
EQM13_RS02930	COG4412	M6 family metalloprotease domain protein
EQM13_RS02930	COG1404	Belongs to the peptidase S8 family
EQM13_RS02930	COG1404	Belongs to the peptidase S8 family
EQM13_RS02935	COG1435	thymidine kinase activity
EQM13_RS02945	COG2235	arginine
EQM13_RS02950	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EQM13_RS02975	COG0559	Belongs to the binding-protein-dependent transport system permease family
EQM13_RS02995	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03000	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS03000	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS03010	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03010	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS03015	COG3715	PTS system
EQM13_RS03020	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS03035	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
EQM13_RS03040	COG1063	alcohol dehydrogenase
EQM13_RS03050	COG1979	alcohol dehydrogenase
EQM13_RS03060	COG0728	peptidoglycan biosynthetic process
EQM13_RS03065	COG1045	serine acetyltransferase
EQM13_RS03070	COG1396	sequence-specific DNA binding
EQM13_RS03090	COG3266	domain, Protein
EQM13_RS03090	COG2911	Protein conserved in bacteria
EQM13_RS03090	COG1361	Conserved repeat domain
EQM13_RS03110	COG0656	L-ascorbic acid biosynthetic process
EQM13_RS03120	COG0504	CTP synthase activity
EQM13_RS03125	COG2911	Protein conserved in bacteria
EQM13_RS03125	COG1361	Conserved repeat domain
EQM13_RS03125	COG3266	domain, Protein
EQM13_RS03130	COG0577	efflux transmembrane transporter activity
EQM13_RS03130	COG1136	(ABC) transporter
EQM13_RS03140	COG1136	(ABC) transporter
EQM13_RS03145	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EQM13_RS03150	COG1607	acyl-coa hydrolase
EQM13_RS03155	COG3246	L-lysine catabolic process to acetate
EQM13_RS03160	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
EQM13_RS03165	COG1494	fructose-1,6-bisphosphatase
EQM13_RS03170	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EQM13_RS03175	COG0254	rRNA binding
EQM13_RS03180	COG3872	metal-dependent enzyme
EQM13_RS03185	COG2890	protein-(glutamine-N5) methyltransferase activity
EQM13_RS03190	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EQM13_RS03200	COG0009	L-threonylcarbamoyladenylate synthase
EQM13_RS03210	COG0698	ribose 5-phosphate isomerase
EQM13_RS03215	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EQM13_RS03225	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EQM13_RS03230	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
EQM13_RS03235	COG3829	transcription factor binding
EQM13_RS03235	COG3290	protein histidine kinase activity
EQM13_RS03240	COG0183	Belongs to the thiolase family
EQM13_RS03245	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EQM13_RS03255	COG0569	domain protein
EQM13_RS03260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EQM13_RS03270	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EQM13_RS03275	COG2385	sporulation resulting in formation of a cellular spore
EQM13_RS03280	COG0739	heme binding
EQM13_RS03285	COG1609	Transcriptional regulator
EQM13_RS03290	COG1077	Cell shape determining protein MreB Mrl
EQM13_RS03295	COG4786	Flagellar basal body rod
EQM13_RS03330	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EQM13_RS03340	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EQM13_RS03350	COG0383	alpha-mannosidase activity
EQM13_RS03355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03355	COG3711	transcriptional antiterminator
EQM13_RS03360	COG1482	cell wall glycoprotein biosynthetic process
EQM13_RS03365	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EQM13_RS03370	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EQM13_RS03390	COG1256	bacterial-type flagellum assembly
EQM13_RS03390	COG4786	Flagellar basal body rod
EQM13_RS03400	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EQM13_RS03405	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
EQM13_RS03410	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
EQM13_RS03420	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
EQM13_RS03430	COG2604	Protein of unknown function DUF115
EQM13_RS03445	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS03455	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EQM13_RS03455	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
EQM13_RS03465	COG1349	DNA-binding transcription factor activity
EQM13_RS03475	COG1882	Formate acetyltransferase
EQM13_RS03480	COG1447	Phosphotransferase system cellobiose-specific component IIA
EQM13_RS03490	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EQM13_RS03510	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EQM13_RS03515	COG1083	cytidylyl-transferase
EQM13_RS03520	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
EQM13_RS03525	COG2089	acid synthase
EQM13_RS03545	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EQM13_RS03560	COG3711	transcriptional antiterminator
EQM13_RS03560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03565	COG0235	Class ii aldolase
EQM13_RS03570	COG1063	alcohol dehydrogenase
EQM13_RS03580	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03580	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03580	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EQM13_RS03585	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS03590	COG3775	system Galactitol-specific IIC component
EQM13_RS03595	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS03605	COG3622	Belongs to the hyi family
EQM13_RS03610	COG2084	Dehydrogenase
EQM13_RS03615	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS03620	COG1063	alcohol dehydrogenase
EQM13_RS03625	COG1181	Belongs to the D-alanine--D-alanine ligase family
EQM13_RS03630	COG2723	6-phospho-beta-galactosidase activity
EQM13_RS03640	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EQM13_RS03650	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
EQM13_RS03655	COG1447	Phosphotransferase system cellobiose-specific component IIA
EQM13_RS03660	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS03660	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS03665	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EQM13_RS03670	COG0281	malic enzyme
EQM13_RS03690	COG1476	TRANSCRIPTIONal
EQM13_RS03695	COG1592	Rubrerythrin
EQM13_RS03735	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
EQM13_RS03740	COG1516	flagellar protein fliS
EQM13_RS03755	COG0653	protein targeting
EQM13_RS03760	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
EQM13_RS03765	COG0840	transmembrane signaling receptor activity
EQM13_RS03770	COG4191	Histidine kinase
EQM13_RS03775	COG1982	Orn Lys Arg decarboxylase major
EQM13_RS03780	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EQM13_RS03785	COG0802	atpase or kinase
EQM13_RS03790	COG1214	PFAM Peptidase M22, glycoprotease
EQM13_RS03795	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EQM13_RS03800	COG0488	(ABC) transporter
EQM13_RS03810	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
EQM13_RS03815	COG1960	acyl-CoA dehydrogenase activity
EQM13_RS03820	COG2086	electron transfer activity
EQM13_RS03825	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
EQM13_RS03835	COG1811	Na channel or pump
EQM13_RS03840	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EQM13_RS03845	COG0459	protein refolding
EQM13_RS03850	COG2390	Transcriptional regulator
EQM13_RS03860	COG1595	DNA-templated transcription, initiation
EQM13_RS03895	COG0516	GMP reductase activity
EQM13_RS03895	COG0517	IMP dehydrogenase activity
EQM13_RS03920	COG0813	purine-nucleoside phosphorylase activity
EQM13_RS03925	COG0519	Catalyzes the synthesis of GMP from XMP
EQM13_RS03940	COG3715	PTS system
EQM13_RS03945	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS03950	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EQM13_RS03960	COG1420	regulation of RNA biosynthetic process
EQM13_RS03975	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS03980	COG0517	IMP dehydrogenase activity
EQM13_RS03980	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
EQM13_RS03985	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS03995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS04000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EQM13_RS04005	COG1737	Transcriptional regulator
EQM13_RS04010	COG0531	amino acid
EQM13_RS04015	COG0686	Belongs to the AlaDH PNT family
EQM13_RS04020	COG3711	transcriptional antiterminator
EQM13_RS04020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS04045	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS04050	COG3775	system Galactitol-specific IIC component
EQM13_RS04065	COG3829	transcription factor binding
EQM13_RS04075	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
EQM13_RS04080	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
EQM13_RS04085	COG4496	protein, YerC YecD
EQM13_RS04105	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
EQM13_RS04120	COG0210	DNA helicase
EQM13_RS04125	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EQM13_RS04150	COG0601	transmembrane transport
EQM13_RS04155	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM13_RS04160	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS04165	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS04170	COG4166	transmembrane transport
EQM13_RS04185	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
EQM13_RS04190	COG0860	N-Acetylmuramoyl-L-alanine amidase
EQM13_RS04195	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
EQM13_RS04205	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
EQM13_RS04210	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
EQM13_RS04245	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
EQM13_RS04270	COG1846	Transcriptional regulator
EQM13_RS04290	COG0717	Belongs to the dCTP deaminase family
EQM13_RS04305	COG3620	sequence-specific DNA binding
EQM13_RS04315	COG3829	transcription factor binding
EQM13_RS04325	COG0010	Belongs to the arginase family
EQM13_RS04330	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM13_RS04345	COG1321	iron dependent repressor
EQM13_RS04360	COG1131	(ABC) transporter
EQM13_RS04365	COG1725	Transcriptional regulator
EQM13_RS04370	COG1131	(ABC) transporter
EQM13_RS04380	COG0501	Belongs to the peptidase M48B family
EQM13_RS04385	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EQM13_RS04390	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
EQM13_RS04395	COG1131	(ABC) transporter
EQM13_RS04415	COG0534	Mate efflux family protein
EQM13_RS04425	COG0534	Mate efflux family protein
EQM13_RS04440	COG1269	ATP hydrolysis coupled proton transport
EQM13_RS04445	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EQM13_RS04470	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
EQM13_RS04475	COG1394	ATPase activity, coupled to movement of substances
EQM13_RS04480	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
EQM13_RS04485	COG0174	glutamine synthetase
EQM13_RS04505	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EQM13_RS04505	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EQM13_RS04525	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM13_RS04545	COG0438	transferase activity, transferring glycosyl groups
EQM13_RS04545	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EQM13_RS04570	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
EQM13_RS04575	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EQM13_RS04580	COG3959	Transketolase, thiamine diphosphate binding domain
EQM13_RS04585	COG3958	Transketolase
EQM13_RS04595	COG1388	LysM domain
EQM13_RS04595	COG0791	NLP P60 protein
EQM13_RS04600	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EQM13_RS04605	COG2884	Cell division ATP-binding protein ftsE
EQM13_RS04610	COG2177	Part of the ABC transporter FtsEX involved in
EQM13_RS04615	COG4942	peptidase
EQM13_RS04620	COG0793	Belongs to the peptidase S41A family
EQM13_RS04620	COG3409	Peptidoglycan-binding domain 1 protein
EQM13_RS04635	COG0556	nucleotide-excision repair
EQM13_RS04640	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EQM13_RS04660	COG0322	excinuclease ABC activity
EQM13_RS04670	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
EQM13_RS04680	COG1619	proteins homologs of microcin C7 resistance protein MccF
EQM13_RS04690	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EQM13_RS04695	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
EQM13_RS04700	COG1660	Displays ATPase and GTPase activities
EQM13_RS04705	COG0391	Required for morphogenesis under gluconeogenic growth conditions
EQM13_RS04720	COG1481	regulation of sporulation
EQM13_RS04725	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS04740	COG0205	6-phosphofructokinase activity
EQM13_RS04750	COG3030	protein affecting phage T7 exclusion by the F plasmid
EQM13_RS04825	COG1192	Involved in chromosome partitioning
EQM13_RS04830	COG1475	DNA binding
EQM13_RS04880	COG0741	lytic transglycosylase activity
EQM13_RS04880	COG0791	NLP P60 protein
EQM13_RS04950	COG3843	relaxase mobilization nuclease domain protein
EQM13_RS04990	COG1342	Belongs to the UPF0251 family
EQM13_RS04995	COG0822	iron-sulfur transferase activity
EQM13_RS05010	COG1144	Oxidoreductase
EQM13_RS05040	COG1309	transcriptional regulator
EQM13_RS05065	COG0840	transmembrane signaling receptor activity
EQM13_RS05085	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM13_RS05095	COG3620	sequence-specific DNA binding
EQM13_RS05105	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EQM13_RS05115	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EQM13_RS05120	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
EQM13_RS05130	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS05135	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EQM13_RS05140	COG0436	Aminotransferase
EQM13_RS05145	COG1288	antiporter activity
EQM13_RS05150	COG1574	metal-dependent hydrolase with the TIM-barrel fold
EQM13_RS05155	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
EQM13_RS05155	COG2755	lipolytic protein G-D-S-L family
EQM13_RS05160	COG1819	glycosyl
EQM13_RS05165	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
EQM13_RS05175	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
EQM13_RS05190	COG1429	ligase activity, forming nitrogen-metal bonds
EQM13_RS05195	COG1239	Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX
EQM13_RS05220	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
EQM13_RS05240	COG0693	protein deglycase activity
EQM13_RS05260	COG1132	(ABC) transporter
EQM13_RS05275	COG1309	transcriptional regulator
EQM13_RS05285	COG1132	(ABC) transporter
EQM13_RS05290	COG4545	Glutaredoxin-related protein
EQM13_RS05320	COG1131	(ABC) transporter
EQM13_RS05340	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
EQM13_RS05350	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS05365	COG3775	system Galactitol-specific IIC component
EQM13_RS05375	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS05375	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS05380	COG0586	Pfam SNARE associated Golgi protein
EQM13_RS05390	COG0667	Aldo Keto reductase
EQM13_RS05400	COG1307	EDD domain protein, DegV family
EQM13_RS05410	COG0039	L-malate dehydrogenase activity
EQM13_RS05415	COG0519	Catalyzes the synthesis of GMP from XMP
EQM13_RS05420	COG1683	Conserved Protein
EQM13_RS05425	COG1283	sodium-dependent phosphate transmembrane transporter activity
EQM13_RS05430	COG0351	phosphomethylpyrimidine kinase
EQM13_RS05430	COG0352	thiamine-phosphate diphosphorylase activity
EQM13_RS05435	COG0488	(ABC) transporter
EQM13_RS05450	COG2252	PERMEase
EQM13_RS05465	COG0674	pyruvate-flavodoxin oxidoreductase activity
EQM13_RS05470	COG1013	pyruvate-flavodoxin oxidoreductase activity
EQM13_RS05480	COG0183	Belongs to the thiolase family
EQM13_RS05485	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM13_RS05490	COG1024	Enoyl-CoA hydratase
EQM13_RS05495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EQM13_RS05500	COG1960	acyl-CoA dehydrogenase activity
EQM13_RS05505	COG2086	electron transfer activity
EQM13_RS05510	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
EQM13_RS05535	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS05540	COG1414	Transcriptional regulator
EQM13_RS05545	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EQM13_RS05550	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EQM13_RS05555	COG0473	3-isopropylmalate dehydrogenase activity
EQM13_RS05560	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
EQM13_RS05565	COG1361	Conserved repeat domain
EQM13_RS05575	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS05590	COG1735	metal-dependent hydrolase with the TIM-barrel fold
EQM13_RS05600	COG1414	Transcriptional regulator
EQM13_RS05620	COG4569	acetaldehyde dehydrogenase (acetylating) activity
EQM13_RS05625	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EQM13_RS05640	COG3135	benzoate transporter
EQM13_RS05675	COG1404	Belongs to the peptidase S8 family
EQM13_RS05680	COG1902	pentaerythritol trinitrate reductase activity
EQM13_RS05690	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
EQM13_RS05705	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
EQM13_RS05710	COG3328	transposase activity
EQM13_RS05715	COG3464	Transposase
EQM13_RS05760	COG1132	(ABC) transporter
EQM13_RS05765	COG1132	(ABC) transporter
EQM13_RS05770	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
EQM13_RS05780	COG0493	'glutamate synthase
EQM13_RS05805	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
EQM13_RS05825	COG1686	Belongs to the peptidase S11 family
EQM13_RS05885	COG2226	methyltransferase
EQM13_RS05905	COG2996	Protein conserved in bacteria
EQM13_RS06015	COG0823	Involved in the tonB-independent uptake of proteins
EQM13_RS06015	COG4946	Tricorn protease homolog
EQM13_RS06015	COG1506	peptidase
EQM13_RS06020	COG0800	Aldolase
EQM13_RS06050	COG1132	(ABC) transporter
EQM13_RS06055	COG1132	(ABC) transporter
EQM13_RS06075	COG1253	flavin adenine dinucleotide binding
EQM13_RS06095	COG0463	Glycosyl transferase, family 2
EQM13_RS06095	COG0457	Tetratricopeptide repeat
EQM13_RS06100	COG0803	Belongs to the bacterial solute-binding protein 9 family
EQM13_RS06105	COG1121	(ABC) transporter
EQM13_RS06110	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EQM13_RS06115	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EQM13_RS06140	COG1956	GAF domain-containing protein
EQM13_RS06160	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM13_RS06170	COG1362	aminopeptidase activity
EQM13_RS06175	COG0561	phosphatase activity
EQM13_RS06180	COG1242	4 iron, 4 sulfur cluster binding
EQM13_RS06215	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
EQM13_RS06260	COG4166	transmembrane transport
EQM13_RS06265	COG0601	transmembrane transport
EQM13_RS06270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM13_RS06275	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS06280	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS06290	COG1971	Probably functions as a manganese efflux pump
EQM13_RS06295	COG1472	Belongs to the glycosyl hydrolase 3 family
EQM13_RS06305	COG1074	ATP-dependent DNA helicase activity
EQM13_RS06325	COG0312	modulator of DNA gyrase
EQM13_RS06330	COG1132	(ABC) transporter
EQM13_RS06340	COG0396	ATPase activity
EQM13_RS06345	COG0719	Fe-S assembly protein
EQM13_RS06350	COG0719	Fe-S assembly protein
EQM13_RS06355	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EQM13_RS06370	COG1181	Belongs to the D-alanine--D-alanine ligase family
EQM13_RS06375	COG2720	vancomycin resistance protein
EQM13_RS06385	COG1132	(ABC) transporter
EQM13_RS06415	COG1132	(ABC) transporter
EQM13_RS06440	COG3842	ATPase activity
EQM13_RS06445	COG2032	superoxide dismutase activity
EQM13_RS06455	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
EQM13_RS06470	COG2190	(PTS) system
EQM13_RS06475	COG0420	3'-5' exonuclease activity
EQM13_RS06515	COG0840	transmembrane signaling receptor activity
EQM13_RS06520	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EQM13_RS06520	COG0574	Belongs to the PEP-utilizing enzyme family
EQM13_RS06540	COG1464	Belongs to the NlpA lipoprotein family
EQM13_RS06545	COG2011	ABC-type metal ion transport system permease component
EQM13_RS06565	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EQM13_RS06590	COG0284	orotidine-5'-phosphate decarboxylase activity
EQM13_RS06595	COG0543	2 iron, 2 sulfur cluster binding
EQM13_RS06600	COG0167	dihydroorotate dehydrogenase activity
EQM13_RS06610	COG0733	neurotransmitter:sodium symporter activity
EQM13_RS06615	COG0697	spore germination
EQM13_RS06630	COG1278	Cold shock
EQM13_RS06645	COG0800	Aldolase
EQM13_RS06660	COG1737	Transcriptional regulator
EQM13_RS06665	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS06670	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
EQM13_RS06680	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS06685	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS06685	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS06695	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EQM13_RS06700	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EQM13_RS06705	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS06705	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS06710	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS06715	COG3775	system Galactitol-specific IIC component
EQM13_RS06720	COG1063	alcohol dehydrogenase
EQM13_RS06725	COG0235	Class ii aldolase
EQM13_RS06730	COG1454	alcohol dehydrogenase
EQM13_RS06735	COG1063	alcohol dehydrogenase
EQM13_RS06745	COG0525	valine-tRNA ligase activity
EQM13_RS06775	COG0726	polysaccharide deacetylase
EQM13_RS06795	COG2171	N-acyltransferase activity
EQM13_RS06800	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EQM13_RS06805	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EQM13_RS06810	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EQM13_RS06825	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EQM13_RS06830	COG2226	methyltransferase
EQM13_RS06840	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EQM13_RS06870	COG0745	RESPONSE REGULATOR receiver
EQM13_RS06875	COG2205	protein histidine kinase activity
EQM13_RS06895	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EQM13_RS06900	COG0546	phosphoglycolate phosphatase activity
EQM13_RS06920	COG1132	(ABC) transporter
EQM13_RS06925	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EQM13_RS06935	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EQM13_RS06940	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EQM13_RS06950	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EQM13_RS06955	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EQM13_RS06960	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM13_RS06960	COG0072	phenylalanine-tRNA ligase activity
EQM13_RS06975	COG1193	negative regulation of DNA recombination
EQM13_RS06980	COG0018	arginyl-trna synthetase
EQM13_RS06990	COG1032	radical SAM domain protein
EQM13_RS07005	COG0280	phosphate acetyltransferase
EQM13_RS07100	COG3858	chitin binding
EQM13_RS07105	COG1489	DNA binding
EQM13_RS07110	COG0840	transmembrane signaling receptor activity
EQM13_RS07125	COG3279	Response regulator of the LytR AlgR family
EQM13_RS07145	COG1136	(ABC) transporter
EQM13_RS07160	COG1132	(ABC) transporter
EQM13_RS07165	COG1695	Transcriptional regulator
EQM13_RS07190	COG0658	competence protein
EQM13_RS07190	COG2333	competence protein COMEC
EQM13_RS07200	COG2502	aspartate--ammonia ligase
EQM13_RS07230	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EQM13_RS07235	COG0632	four-way junction helicase activity
EQM13_RS07240	COG2255	four-way junction helicase activity
EQM13_RS07250	COG2385	sporulation resulting in formation of a cellular spore
EQM13_RS07250	COG2247	cell wall binding repeat
EQM13_RS07255	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
EQM13_RS07265	COG1862	Preprotein translocase
EQM13_RS07290	COG3279	Response regulator of the LytR AlgR family
EQM13_RS07310	COG1136	(ABC) transporter
EQM13_RS07310	COG0577	efflux transmembrane transporter activity
EQM13_RS07375	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
EQM13_RS07375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EQM13_RS07380	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EQM13_RS07385	COG1490	D-aminoacyl-tRNA deacylase activity
EQM13_RS07390	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EQM13_RS07395	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EQM13_RS07400	COG1247	-acetyltransferase
EQM13_RS07410	COG3711	transcriptional antiterminator
EQM13_RS07425	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
EQM13_RS07430	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM13_RS07435	COG1446	asparaginase
EQM13_RS07440	COG1447	Phosphotransferase system cellobiose-specific component IIA
EQM13_RS07445	COG1960	acyl-CoA dehydrogenase activity
EQM13_RS07465	COG1131	(ABC) transporter
EQM13_RS07575	COG1132	(ABC) transporter
EQM13_RS07580	COG1175	transmembrane transport
EQM13_RS07585	COG0395	ABC-type sugar transport system, permease component
EQM13_RS07595	COG3842	ATPase activity
EQM13_RS07600	COG3142	Participates in the control of copper homeostasis
EQM13_RS07620	COG3340	Belongs to the peptidase S51 family
EQM13_RS07695	COG0406	alpha-ribazole phosphatase activity
EQM13_RS07780	COG0436	Aminotransferase
EQM13_RS07785	COG1288	antiporter activity
EQM13_RS07795	COG0432	Pfam Uncharacterised protein family UPF0047
EQM13_RS07840	COG2890	protein-(glutamine-N5) methyltransferase activity
EQM13_RS07850	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS07855	COG4989	oxidoreductase activity
EQM13_RS07860	COG3775	system Galactitol-specific IIC component
EQM13_RS07875	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS07880	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
EQM13_RS07890	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS07890	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS07900	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS07905	COG3775	system Galactitol-specific IIC component
EQM13_RS07910	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS07920	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
EQM13_RS07940	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EQM13_RS07960	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EQM13_RS07980	COG1160	GTP binding
EQM13_RS07985	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
EQM13_RS07995	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
EQM13_RS08005	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
EQM13_RS08010	COG1131	(ABC) transporter
EQM13_RS08015	COG1846	Transcriptional regulator
EQM13_RS08040	COG2361	Protein of unknown function DUF86
EQM13_RS08055	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EQM13_RS08060	COG1799	cell septum assembly
EQM13_RS08070	COG2302	S4 RNA-binding domain
EQM13_RS08075	COG3599	regulation of cell shape
EQM13_RS08085	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
EQM13_RS08090	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EQM13_RS08095	COG0564	pseudouridine synthase activity
EQM13_RS08100	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
EQM13_RS08105	COG1293	RNA-binding protein homologous to eukaryotic snRNP
EQM13_RS08110	COG1561	YicC-like family, N-terminal region
EQM13_RS08115	COG2052	Domain of unknown function (DUF370)
EQM13_RS08120	COG0194	GDP metabolic process
EQM13_RS08125	COG1758	RNA polymerase activity
EQM13_RS08130	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EQM13_RS08135	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EQM13_RS08140	COG0242	peptide deformylase activity
EQM13_RS08145	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EQM13_RS08150	COG2738	Putative neutral zinc metallopeptidase
EQM13_RS08155	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EQM13_RS08155	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EQM13_RS08160	COG0820	rRNA (adenine-C2-)-methyltransferase activity
EQM13_RS08170	COG0515	serine threonine protein kinase
EQM13_RS08170	COG2815	serine threonine protein kinase
EQM13_RS08175	COG1162	GTPase activity
EQM13_RS08180	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EQM13_RS08200	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EQM13_RS08205	COG1302	Protein conserved in bacteria
EQM13_RS08210	COG1461	Dihydroxyacetone kinase
EQM13_RS08215	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EQM13_RS08220	COG0742	ribosomal rna small subunit methyltransferase
EQM13_RS08225	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EQM13_RS08235	COG3314	Sporulation integral membrane protein YlbJ
EQM13_RS08240	COG1752	Esterase of the alpha-beta hydrolase superfamily
EQM13_RS08250	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EQM13_RS08260	COG0333	Belongs to the bacterial ribosomal protein bL32 family
EQM13_RS08265	COG0416	fatty acid biosynthetic process
EQM13_RS08270	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EQM13_RS08290	COG0552	protein localization to endoplasmic reticulum
EQM13_RS08305	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EQM13_RS08310	COG0228	four-way junction DNA binding
EQM13_RS08315	COG1837	Belongs to the UPF0109 family
EQM13_RS08320	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EQM13_RS08330	COG1132	(ABC) transporter
EQM13_RS08335	COG0335	large ribosomal subunit rRNA binding
EQM13_RS08340	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
EQM13_RS08345	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EQM13_RS08355	COG2257	FlhB HrpN YscU SpaS Family
EQM13_RS08360	COG0792	nuclease activity
EQM13_RS08365	COG0606	chelatase, subunit chli
EQM13_RS08370	COG0758	DNA mediated transformation
EQM13_RS08375	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EQM13_RS08395	COG1815	bacterial-type flagellum-dependent cell motility
EQM13_RS08400	COG1558	bacterial-type flagellum-dependent cell motility
EQM13_RS08405	COG1677	Flagellar hook-basal body complex protein FliE
EQM13_RS08415	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM13_RS08425	COG1157	protein secretion by the type III secretion system
EQM13_RS08445	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
EQM13_RS08480	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM13_RS08485	COG1776	CheC inhibitor of MCP methylation
EQM13_RS08485	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM13_RS08490	COG2201	protein-glutamate methylesterase activity
EQM13_RS08500	COG1338	Plays a role in the flagellum-specific transport system
EQM13_RS08505	COG1987	bacterial-type flagellum assembly
EQM13_RS08510	COG1684	flagellar biosynthetic protein fliR
EQM13_RS08515	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EQM13_RS08520	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EQM13_RS08525	COG1419	protein localization to endoplasmic reticulum
EQM13_RS08530	COG0455	bacterial-type flagellum organization
EQM13_RS08540	COG2201	protein-glutamate methylesterase activity
EQM13_RS08545	COG2198	Histidine kinase
EQM13_RS08545	COG0643	Histidine kinase
EQM13_RS08550	COG0835	chemotaxis
EQM13_RS08555	COG1776	CheC inhibitor of MCP methylation
EQM13_RS08560	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
EQM13_RS08565	COG1191	sigma factor activity
EQM13_RS08590	COG1960	acyl-CoA dehydrogenase activity
EQM13_RS08600	COG1181	Belongs to the D-alanine--D-alanine ligase family
EQM13_RS08605	COG0052	Belongs to the universal ribosomal protein uS2 family
EQM13_RS08610	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EQM13_RS08615	COG0528	UMP kinase activity
EQM13_RS08620	COG0233	cytoplasmic translational termination
EQM13_RS08630	COG4589	Belongs to the CDS family
EQM13_RS08635	COG0750	zinc metalloprotease
EQM13_RS08650	COG0779	Required for maturation of 30S ribosomal subunits
EQM13_RS08655	COG0195	Participates in both transcription termination and antitermination
EQM13_RS08665	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EQM13_RS08670	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EQM13_RS08675	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
EQM13_RS08680	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EQM13_RS08685	COG0196	riboflavin kinase activity
EQM13_RS08690	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EQM13_RS08695	COG1185	polyribonucleotide nucleotidyltransferase activity
EQM13_RS08700	COG0726	polysaccharide deacetylase
EQM13_RS08705	COG0612	Peptidase, M16
EQM13_RS08710	COG0756	dUTP diphosphatase activity
EQM13_RS08720	COG0527	aspartate kinase activity
EQM13_RS08725	COG0740	serine-type endopeptidase activity
EQM13_RS08730	COG1674	ftsk spoiiie
EQM13_RS08735	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM13_RS08740	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EQM13_RS08745	COG1546	Belongs to the CinA family
EQM13_RS08745	COG1058	Belongs to the CinA family
EQM13_RS08750	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
EQM13_RS08760	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EQM13_RS08775	COG1418	mRNA catabolic process
EQM13_RS08780	COG2359	stage V sporulation protein S
EQM13_RS08785	COG0613	PHP domain protein
EQM13_RS08795	COG0436	Aminotransferase
EQM13_RS08805	COG1131	(ABC) transporter
EQM13_RS08820	COG1595	DNA-templated transcription, initiation
EQM13_RS08830	COG4555	ABC transporter
EQM13_RS08865	COG1126	abc transporter atp-binding protein
EQM13_RS08870	COG0765	amino acid transport
EQM13_RS08880	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EQM13_RS08885	COG1414	Transcriptional regulator
EQM13_RS08890	COG2153	protein acetylation
EQM13_RS08905	COG4974	Belongs to the 'phage' integrase family
EQM13_RS08910	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EQM13_RS08915	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EQM13_RS08925	COG1349	DNA-binding transcription factor activity
EQM13_RS08930	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
EQM13_RS08935	COG1923	regulation of RNA biosynthetic process
EQM13_RS08945	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
EQM13_RS08950	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EQM13_RS08955	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM13_RS08965	COG0436	Aminotransferase
EQM13_RS08990	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
EQM13_RS08995	COG0539	negative regulation of cytoplasmic translation
EQM13_RS08995	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
EQM13_RS09000	COG0204	Acyl-transferase
EQM13_RS09005	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EQM13_RS09020	COG2081	HI0933 family
EQM13_RS09025	COG0406	alpha-ribazole phosphatase activity
EQM13_RS09040	COG1013	pyruvate-flavodoxin oxidoreductase activity
EQM13_RS09045	COG0674	pyruvate-flavodoxin oxidoreductase activity
EQM13_RS09045	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EQM13_RS09060	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
EQM13_RS09070	COG1187	pseudouridine synthase activity
EQM13_RS09080	COG0543	2 iron, 2 sulfur cluster binding
EQM13_RS09085	COG1686	Belongs to the peptidase S11 family
EQM13_RS09090	COG3874	Sporulation protein YtfJ
EQM13_RS09100	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EQM13_RS09105	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EQM13_RS09110	COG1994	Peptidase M50
EQM13_RS09115	COG1686	Belongs to the peptidase S11 family
EQM13_RS09130	COG4974	Belongs to the 'phage' integrase family
EQM13_RS09155	COG0463	Glycosyl transferase, family 2
EQM13_RS09205	COG0601	transmembrane transport
EQM13_RS09210	COG4166	transmembrane transport
EQM13_RS09215	COG0750	zinc metalloprotease
EQM13_RS09220	COG0497	DNA recombination
EQM13_RS09225	COG1438	arginine binding
EQM13_RS09230	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
EQM13_RS09250	COG1722	exodeoxyribonuclease VII activity
EQM13_RS09255	COG1570	exodeoxyribonuclease VII activity
EQM13_RS09265	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EQM13_RS09280	COG1302	Protein conserved in bacteria
EQM13_RS09320	COG3854	ATPases associated with a variety of cellular activities
EQM13_RS09330	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EQM13_RS09360	COG1361	Conserved repeat domain
EQM13_RS09380	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EQM13_RS09385	COG4969	Belongs to the N-Me-Phe pilin family
EQM13_RS09400	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EQM13_RS09405	COG3464	Transposase
EQM13_RS09420	COG1802	Transcriptional regulator
EQM13_RS09425	COG2081	HI0933 family
EQM13_RS09430	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
EQM13_RS09460	COG3706	GGDEF domain
EQM13_RS09480	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
EQM13_RS09495	COG3829	transcription factor binding
EQM13_RS09510	COG1132	(ABC) transporter
EQM13_RS09520	COG4948	Mandelate Racemase Muconate Lactonizing
EQM13_RS09550	COG1609	Transcriptional regulator
EQM13_RS09555	COG0454	-acetyltransferase
EQM13_RS09580	COG4656	Part of a membrane complex involved in electron transport
EQM13_RS09585	COG4658	electron transport chain
EQM13_RS09590	COG4659	FMN binding
EQM13_RS09595	COG4660	Part of a membrane complex involved in electron transport
EQM13_RS09600	COG4657	Part of a membrane complex involved in electron transport
EQM13_RS09605	COG1245	4Fe-4S binding domain
EQM13_RS09605	COG2878	Part of a membrane complex involved in electron transport
EQM13_RS09630	COG0191	fructose-bisphosphate aldolase activity
EQM13_RS09640	COG1063	alcohol dehydrogenase
EQM13_RS09655	COG3775	system Galactitol-specific IIC component
EQM13_RS09665	COG1063	alcohol dehydrogenase
EQM13_RS09675	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EQM13_RS09730	COG4120	Belongs to the binding-protein-dependent transport system permease family
EQM13_RS09745	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
EQM13_RS09770	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EQM13_RS09780	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EQM13_RS09785	COG1518	maintenance of DNA repeat elements
EQM13_RS09835	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EQM13_RS09840	COG1518	maintenance of DNA repeat elements
EQM13_RS09880	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS09885	COG1454	alcohol dehydrogenase
EQM13_RS09905	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS09920	COG0191	fructose-bisphosphate aldolase activity
EQM13_RS09925	COG1063	alcohol dehydrogenase
EQM13_RS09930	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS09930	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS09945	COG1131	(ABC) transporter
EQM13_RS09970	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EQM13_RS09975	COG1288	antiporter activity
EQM13_RS09990	COG0438	transferase activity, transferring glycosyl groups
EQM13_RS10010	COG1131	(ABC) transporter
EQM13_RS10015	COG4585	Histidine kinase
EQM13_RS10020	COG2197	response regulator
EQM13_RS10030	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
EQM13_RS10060	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS10060	COG2213	PTS system mannitol-specific
EQM13_RS10065	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EQM13_RS10070	COG0434	BtpA family
EQM13_RS10075	COG3775	system Galactitol-specific IIC component
EQM13_RS10080	COG3414	Phosphotransferase system galactitol-specific IIB component
EQM13_RS10085	COG1363	Peptidase, m42
EQM13_RS10100	COG0410	ABC transporter
EQM13_RS10155	COG1201	RNA secondary structure unwinding
EQM13_RS10190	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM13_RS10200	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
EQM13_RS10220	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
EQM13_RS10230	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM13_RS10235	COG1288	antiporter activity
EQM13_RS10310	COG1598	PFAM Uncharacterised protein family UPF0150
EQM13_RS10370	COG0456	acetyltransferase
EQM13_RS10375	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EQM13_RS10510	COG3464	Transposase
EQM13_RS10515	COG0210	DNA helicase
EQM13_RS10610	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
EQM13_RS10640	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EQM13_RS10660	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
EQM13_RS10670	COG1210	Utp--glucose-1-phosphate uridylyltransferase
EQM13_RS10690	COG4464	protein tyrosine phosphatase activity
EQM13_RS10695	COG0489	protein tyrosine kinase activity
EQM13_RS10700	COG3944	biosynthesis protein
EQM13_RS10710	COG0406	alpha-ribazole phosphatase activity
EQM13_RS10740	COG5002	protein histidine kinase activity
EQM13_RS10745	COG0745	RESPONSE REGULATOR receiver
EQM13_RS10765	COG0768	penicillin binding
EQM13_RS10770	COG0572	uridine kinase
EQM13_RS10780	COG4122	O-methyltransferase activity
EQM13_RS10785	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EQM13_RS10795	COG3679	Belongs to the UPF0342 family
EQM13_RS10800	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EQM13_RS10805	COG0735	belongs to the Fur family
EQM13_RS10815	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EQM13_RS10825	COG4472	Bacterial protein of unknown function (DUF965)
EQM13_RS10830	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EQM13_RS10835	COG0628	permease
EQM13_RS10850	COG0732	type I restriction modification DNA specificity domain
EQM13_RS10885	COG0822	iron-sulfur transferase activity
EQM13_RS10895	COG1959	2 iron, 2 sulfur cluster binding
EQM13_RS10915	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
EQM13_RS10920	COG0495	leucyl-tRNA aminoacylation
EQM13_RS10925	COG0017	Asparaginyl-tRNA synthetase
EQM13_RS10930	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EQM13_RS10935	COG3457	Alanine racemase
EQM13_RS10945	COG5012	cobalamin binding
EQM13_RS10955	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EQM13_RS10965	COG3804	dihydrodipicolinate reductase
EQM13_RS10970	COG3829	transcription factor binding
EQM13_RS10975	COG5002	protein histidine kinase activity
EQM13_RS10980	COG0745	RESPONSE REGULATOR receiver
EQM13_RS10990	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EQM13_RS10995	COG1873	PFAM PRC-barrel domain
EQM13_RS11000	COG1191	sigma factor activity
EQM13_RS11005	COG1191	sigma factor activity
EQM13_RS11015	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EQM13_RS11020	COG0849	cell division
EQM13_RS11025	COG3856	small basic protein
EQM13_RS11045	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EQM13_RS11050	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EQM13_RS11055	COG0772	Belongs to the SEDS family
EQM13_RS11060	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EQM13_RS11065	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EQM13_RS11070	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EQM13_RS11075	COG0768	penicillin binding
EQM13_RS11085	COG0275	rRNA processing
EQM13_RS11090	COG2001	Belongs to the MraZ family
EQM13_RS11095	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EQM13_RS11100	COG0612	Peptidase, M16
EQM13_RS11105	COG0612	Peptidase, M16
EQM13_RS11115	COG0012	GTP binding
EQM13_RS11130	COG4869	propanediol catabolic process
EQM13_RS11145	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EQM13_RS11160	COG0217	transcriptional regulatory protein
EQM13_RS11165	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EQM13_RS11170	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM13_RS11175	COG0730	response to heat
EQM13_RS11180	COG0730	response to heat
EQM13_RS11190	COG1739	Uncharacterized protein family UPF0029
EQM13_RS11200	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EQM13_RS11220	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EQM13_RS11240	COG1191	sigma factor activity
EQM13_RS11245	COG2172	sigma factor antagonist activity
EQM13_RS11250	COG1366	Belongs to the anti-sigma-factor antagonist family
EQM13_RS11260	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EQM13_RS11260	COG0392	lysyltransferase activity
EQM13_RS11265	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EQM13_RS11305	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EQM13_RS11310	COG2890	protein-(glutamine-N5) methyltransferase activity
EQM13_RS11315	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EQM13_RS11320	COG0358	DNA primase activity
EQM13_RS11325	COG0232	Belongs to the dGTPase family. Type 2 subfamily
EQM13_RS11330	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
EQM13_RS11335	COG0517	IMP dehydrogenase activity
EQM13_RS11340	COG0751	glycine-tRNA ligase activity
EQM13_RS11345	COG0752	glycyl-tRNA synthetase alpha subunit
EQM13_RS11355	COG1381	Involved in DNA repair and RecF pathway recombination
EQM13_RS11360	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EQM13_RS11365	COG0295	cytidine deaminase activity
EQM13_RS11370	COG1470	cell adhesion involved in biofilm formation
EQM13_RS11375	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
EQM13_RS11380	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
EQM13_RS11385	COG1480	7TM receptor with intracellular HD hydrolase
EQM13_RS11390	COG1702	phosphate starvation-inducible protein PhoH
EQM13_RS11410	COG4864	UPF0365 protein
EQM13_RS11415	COG1030	water channel activity
EQM13_RS11420	COG1610	YqeY-like protein
EQM13_RS11430	COG0537	adenosine 5'-monophosphoramidase activity
EQM13_RS11435	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM13_RS11440	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EQM13_RS11445	COG2264	protein methyltransferase activity
EQM13_RS11450	COG0484	heat shock protein binding
EQM13_RS11455	COG0443	Heat shock 70 kDa protein
EQM13_RS11460	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
EQM13_RS11465	COG1420	regulation of RNA biosynthetic process
EQM13_RS11470	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EQM13_RS11475	COG0481	GTPase activity
EQM13_RS11500	COG0268	Binds directly to 16S ribosomal RNA
EQM13_RS11505	COG1466	dna polymerase III delta subunit
EQM13_RS11510	COG0658	competence protein
EQM13_RS11510	COG2333	competence protein COMEC
EQM13_RS11515	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EQM13_RS11525	COG0778	Nitroreductase
EQM13_RS11535	COG0436	Aminotransferase
EQM13_RS11540	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
EQM13_RS11550	COG1115	amino acid carrier protein
EQM13_RS11565	COG1132	(ABC) transporter
EQM13_RS11580	COG0860	N-Acetylmuramoyl-L-alanine amidase
EQM13_RS11610	COG5002	protein histidine kinase activity
EQM13_RS11625	COG1921	L-seryl-tRNASec selenium transferase activity
EQM13_RS11635	COG1555	photosystem II stabilization
EQM13_RS11640	COG1686	Belongs to the peptidase S11 family
EQM13_RS11645	COG0251	oxidation-reduction process
EQM13_RS11650	COG0799	negative regulation of ribosome biogenesis
EQM13_RS11660	COG1713	HD superfamily hydrolase involved in NAD metabolism
EQM13_RS11680	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EQM13_RS11685	COG0211	Belongs to the bacterial ribosomal protein bL27 family
EQM13_RS11695	COG0261	This protein binds to 23S rRNA in the presence of protein L20
EQM13_RS11700	COG1530	ribonuclease E activity
EQM13_RS11720	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
EQM13_RS11725	COG2894	cell division
EQM13_RS11730	COG0850	regulation of cytokinetic process
EQM13_RS11750	COG1077	Cell shape determining protein MreB Mrl
EQM13_RS11755	COG2003	Belongs to the UPF0758 family
EQM13_RS11760	COG0424	maF-like protein
EQM13_RS11795	COG2172	sigma factor antagonist activity
EQM13_RS11810	COG1136	(ABC) transporter
EQM13_RS11815	COG5002	protein histidine kinase activity
EQM13_RS11820	COG0745	RESPONSE REGULATOR receiver
EQM13_RS11840	COG0745	RESPONSE REGULATOR receiver
EQM13_RS11900	COG0237	dephospho-CoA kinase activity
EQM13_RS11905	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM13_RS11905	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM13_RS11925	COG1132	(ABC) transporter
EQM13_RS11945	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS11945	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS11950	COG0800	Aldolase
EQM13_RS11965	COG0598	Magnesium transport protein CorA
EQM13_RS12005	COG1131	(ABC) transporter
EQM13_RS12020	COG1132	(ABC) transporter
EQM13_RS12025	COG1132	(ABC) transporter
EQM13_RS12030	COG0367	asparagine synthase
EQM13_RS12035	COG0671	phosphoesterase, PA-phosphatase related
EQM13_RS12040	COG1136	(ABC) transporter
EQM13_RS12040	COG0577	efflux transmembrane transporter activity
EQM13_RS12050	COG0095	Lipoate-protein ligase
EQM13_RS12055	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
EQM13_RS12060	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EQM13_RS12065	COG1177	transmembrane transport
EQM13_RS12070	COG1176	ABC-type spermidine putrescine transport system, permease component I
EQM13_RS12075	COG3842	ATPase activity
EQM13_RS12080	COG1396	sequence-specific DNA binding
EQM13_RS12090	COG1704	LemA family
EQM13_RS12105	COG0301	tRNA thio-modification
EQM13_RS12110	COG1104	cysteine desulfurase activity
EQM13_RS12135	COG0427	acetyl-CoA hydrolase
EQM13_RS12140	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM13_RS12145	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM13_RS12150	COG1361	Conserved repeat domain
EQM13_RS12160	COG1924	4 iron, 4 sulfur cluster binding
EQM13_RS12180	COG2176	DNA-directed DNA polymerase activity
EQM13_RS12325	COG0583	DNA-binding transcription factor activity
EQM13_RS12330	COG1362	aminopeptidase activity
EQM13_RS12335	COG2197	response regulator
EQM13_RS12345	COG0835	chemotaxis
EQM13_RS12360	COG3706	GGDEF domain
EQM13_RS12365	COG1846	Transcriptional regulator
EQM13_RS12370	COG1597	lipid kinase activity
EQM13_RS12380	COG1132	(ABC) transporter
EQM13_RS12385	COG1132	(ABC) transporter
EQM13_RS12390	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
EQM13_RS12395	COG1378	Sugar-specific transcriptional regulator TrmB
EQM13_RS12420	COG0626	cystathionine gamma-synthase activity
EQM13_RS12430	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
EQM13_RS12435	COG0577	efflux transmembrane transporter activity
EQM13_RS12435	COG1136	(ABC) transporter
EQM13_RS12450	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EQM13_RS12465	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EQM13_RS12470	COG1966	Carbon starvation protein
EQM13_RS12485	COG0564	pseudouridine synthase activity
EQM13_RS12490	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EQM13_RS12495	COG1164	Oligoendopeptidase f
EQM13_RS12500	COG0768	penicillin binding
EQM13_RS12510	COG1716	ATPase activity
EQM13_RS12520	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EQM13_RS12565	COG1518	maintenance of DNA repeat elements
EQM13_RS12605	COG1335	isochorismatase
EQM13_RS12610	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EQM13_RS12620	COG0488	(ABC) transporter
EQM13_RS12630	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
EQM13_RS12655	COG4555	ABC transporter
EQM13_RS12670	COG1131	(ABC) transporter
EQM13_RS12690	COG1266	CAAX protease self-immunity
EQM13_RS12735	COG2814	Major facilitator Superfamily
EQM13_RS12750	COG1132	(ABC) transporter
EQM13_RS12810	COG3279	Response regulator of the LytR AlgR family
EQM13_RS12830	COG3464	Transposase
EQM13_RS12835	COG3459	Glycosyltransferase 36 associated
EQM13_RS12840	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EQM13_RS12845	COG1132	(ABC) transporter
EQM13_RS12850	COG1132	(ABC) transporter
EQM13_RS12865	COG0612	Peptidase, M16
EQM13_RS12880	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EQM13_RS12885	COG1473	amidohydrolase
EQM13_RS12890	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS12900	COG0494	nUDIX hydrolase
EQM13_RS12910	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EQM13_RS12920	COG0569	domain protein
EQM13_RS12925	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EQM13_RS12935	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EQM13_RS12940	COG0557	exoribonuclease II activity
EQM13_RS12945	COG1181	Belongs to the D-alanine--D-alanine ligase family
EQM13_RS12950	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EQM13_RS12975	COG0149	triose-phosphate isomerase activity
EQM13_RS12980	COG0126	phosphoglycerate kinase activity
EQM13_RS12990	COG2390	Transcriptional regulator
EQM13_RS12995	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
EQM13_RS13020	COG0693	protein deglycase activity
EQM13_RS13070	COG3118	belongs to the thioredoxin family
EQM13_RS13085	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
EQM13_RS13090	COG0561	phosphatase activity
EQM13_RS13095	COG1120	ATPase activity
EQM13_RS13100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EQM13_RS13105	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
EQM13_RS13120	COG2720	vancomycin resistance protein
EQM13_RS13130	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EQM13_RS13140	COG0156	8-amino-7-oxononanoate synthase activity
EQM13_RS13145	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EQM13_RS13150	COG0772	Belongs to the SEDS family
EQM13_RS13155	COG1116	anion transmembrane transporter activity
EQM13_RS13160	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS13185	COG1695	Transcriptional regulator
EQM13_RS13195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EQM13_RS13210	COG2116	formate transmembrane transporter activity
EQM13_RS13215	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EQM13_RS13220	COG3404	Formiminotransferase-cyclodeaminase
EQM13_RS13225	COG2759	Belongs to the formate--tetrahydrofolate ligase family
EQM13_RS13230	COG1917	Cupin 2, conserved barrel domain protein
EQM13_RS13230	COG2207	Transcriptional regulator
EQM13_RS13235	COG3275	phosphorelay sensor kinase activity
EQM13_RS13240	COG1115	amino acid carrier protein
EQM13_RS13245	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EQM13_RS13255	COG0626	cystathionine gamma-synthase activity
EQM13_RS13260	COG2217	Heavy metal translocating P-type atpase
EQM13_RS13265	COG0671	phosphoesterase, PA-phosphatase related
EQM13_RS13270	COG0210	DNA helicase
EQM13_RS13285	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
EQM13_RS13310	COG1307	EDD domain protein, DegV family
EQM13_RS13320	COG3858	chitin binding
EQM13_RS13325	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM13_RS13335	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EQM13_RS13345	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EQM13_RS13360	COG1132	(ABC) transporter
EQM13_RS13385	COG0641	radical SAM
EQM13_RS13390	COG1136	(ABC) transporter
EQM13_RS13425	COG1737	Transcriptional regulator
EQM13_RS13435	COG1482	cell wall glycoprotein biosynthetic process
EQM13_RS13440	COG1482	cell wall glycoprotein biosynthetic process
EQM13_RS13445	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS13450	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS13455	COG0784	Response regulator, receiver
EQM13_RS13460	COG3290	protein histidine kinase activity
EQM13_RS13480	COG0218	Necessary for normal cell division and for the maintenance of normal septation
EQM13_RS13485	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
EQM13_RS13490	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EQM13_RS13495	COG0740	serine-type endopeptidase activity
EQM13_RS13500	COG0544	peptidyl-prolyl cis-trans isomerase activity
EQM13_RS13515	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS13520	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS13530	COG0601	transmembrane transport
EQM13_RS13535	COG0747	negative chemotaxis
EQM13_RS13555	COG1592	Rubrerythrin
EQM13_RS13560	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
EQM13_RS13560	COG2199	diguanylate cyclase activity
EQM13_RS13575	COG1051	belongs to the nudix hydrolase family
EQM13_RS13580	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EQM13_RS13595	COG0628	permease
EQM13_RS13600	COG5278	phosphoserine phosphatase activity
EQM13_RS13600	COG0840	transmembrane signaling receptor activity
EQM13_RS13610	COG1819	glycosyl
EQM13_RS13720	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EQM13_RS13815	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EQM13_RS13820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EQM13_RS13825	COG0617	tRNA 3'-terminal CCA addition
EQM13_RS13830	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EQM13_RS13835	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EQM13_RS13840	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS13845	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EQM13_RS13850	COG2070	2-Nitropropane dioxygenase
EQM13_RS13855	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EQM13_RS13875	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS13880	COG3715	PTS system
EQM13_RS13885	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS13890	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS13890	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS13900	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EQM13_RS13915	COG3681	Belongs to the UPF0597 family
EQM13_RS13940	COG0489	protein tyrosine kinase activity
EQM13_RS13950	COG0280	phosphate acetyltransferase
EQM13_RS13955	COG3426	butyrate kinase activity
EQM13_RS13965	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
EQM13_RS13975	COG2339	peptidase activity
EQM13_RS13985	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EQM13_RS13990	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS14010	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
EQM13_RS14015	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
EQM13_RS14035	COG3732	PTS system glucitol sorbitol-specific
EQM13_RS14115	COG1063	alcohol dehydrogenase
EQM13_RS14120	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EQM13_RS14125	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS14130	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS14150	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS14150	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS14165	COG3384	dioxygenase
EQM13_RS14170	COG1132	(ABC) transporter
EQM13_RS14175	COG1132	(ABC) transporter
EQM13_RS14200	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
EQM13_RS14205	COG0860	N-Acetylmuramoyl-L-alanine amidase
EQM13_RS14210	COG0523	cobalamin synthesis protein
EQM13_RS14230	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EQM13_RS14235	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EQM13_RS14240	COG0101	tRNA pseudouridine synthase activity
EQM13_RS14245	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
EQM13_RS14255	COG1122	ATPase activity
EQM13_RS14260	COG0203	ribosomal protein L17
EQM13_RS14265	COG0202	RNA polymerase activity
EQM13_RS14270	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EQM13_RS14275	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EQM13_RS14280	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EQM13_RS14285	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EQM13_RS14290	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EQM13_RS14300	COG0563	adenylate kinase activity
EQM13_RS14305	COG0201	protein transport
EQM13_RS14315	COG1841	ribosomal large subunit assembly
EQM13_RS14320	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EQM13_RS14325	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EQM13_RS14330	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EQM13_RS14335	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EQM13_RS14340	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EQM13_RS14350	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EQM13_RS14355	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EQM13_RS14360	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EQM13_RS14365	COG0255	Belongs to the universal ribosomal protein uL29 family
EQM13_RS14370	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EQM13_RS14375	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EQM13_RS14380	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EQM13_RS14385	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
EQM13_RS14395	COG0089	rRNA binding
EQM13_RS14400	COG0088	Forms part of the polypeptide exit tunnel
EQM13_RS14405	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EQM13_RS14410	COG0051	transcription antitermination factor activity, RNA binding
EQM13_RS14415	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EQM13_RS14425	COG0049	tRNA binding
EQM13_RS14430	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EQM13_RS14435	COG1358	cellular component organization or biogenesis
EQM13_RS14440	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EQM13_RS14445	COG0085	RNA polymerase activity
EQM13_RS14455	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EQM13_RS14465	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EQM13_RS14470	COG0250	Participates in transcription elongation, termination and antitermination
EQM13_RS14475	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EQM13_RS14480	COG0267	Belongs to the bacterial ribosomal protein bL33 family
EQM13_RS14485	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EQM13_RS14500	COG3688	RNA-binding protein containing a PIN domain
EQM13_RS14505	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EQM13_RS14520	COG0215	cysteine-tRNA ligase activity
EQM13_RS14525	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EQM13_RS14535	COG0442	prolyl-tRNA aminoacylation
EQM13_RS14540	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
EQM13_RS14545	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
EQM13_RS14550	COG4956	integral membrane protein (PIN domain superfamily)
EQM13_RS14555	COG1329	Transcriptional regulator
EQM13_RS14570	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
EQM13_RS14575	COG0542	response to heat
EQM13_RS14580	COG3869	Catalyzes the specific phosphorylation of arginine residues in
EQM13_RS14585	COG3880	PFAM UvrB UvrC protein
EQM13_RS14590	COG4463	regulation of RNA biosynthetic process
EQM13_RS14595	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EQM13_RS14600	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EQM13_RS14620	COG0559	Belongs to the binding-protein-dependent transport system permease family
EQM13_RS14630	COG1316	TRANSCRIPTIONal
EQM13_RS14645	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EQM13_RS14655	COG0508	dehydrogenase complex catalyzes the overall conversion of
EQM13_RS14660	COG0508	dehydrogenase complex catalyzes the overall conversion of
EQM13_RS14660	COG0022	dehydrogenase e1 component
EQM13_RS14665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
EQM13_RS14680	COG3732	PTS system glucitol sorbitol-specific
EQM13_RS14690	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS14695	COG2390	Transcriptional regulator
EQM13_RS14700	COG0561	phosphatase activity
EQM13_RS14705	COG2081	HI0933 family
EQM13_RS14710	COG3804	dihydrodipicolinate reductase
EQM13_RS14715	COG4978	Transcriptional regulator
EQM13_RS14715	COG0789	Transcriptional regulator
EQM13_RS14755	COG1573	uracil-dna glycosylase
EQM13_RS14760	COG1573	uracil-dna glycosylase
EQM13_RS14765	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
EQM13_RS14770	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EQM13_RS14780	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EQM13_RS14785	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
EQM13_RS14795	COG3191	aminopeptidase activity
EQM13_RS14800	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
EQM13_RS14805	COG0511	ligase activity, forming carbon-carbon bonds
EQM13_RS14815	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EQM13_RS14820	COG0346	lactoylglutathione lyase activity
EQM13_RS14830	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM13_RS14830	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM13_RS14835	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM13_RS14835	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM13_RS14840	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EQM13_RS14850	COG0037	tRNA processing
EQM13_RS14855	COG2815	serine threonine protein kinase
EQM13_RS14855	COG0515	serine threonine protein kinase
EQM13_RS14880	COG5002	protein histidine kinase activity
EQM13_RS14885	COG0745	RESPONSE REGULATOR receiver
EQM13_RS14895	COG1098	S1 RNA binding domain
EQM13_RS14915	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
EQM13_RS14920	COG0776	regulation of translation
EQM13_RS14925	COG3956	TIGRFAM MazG family protein
EQM13_RS14930	COG2244	polysaccharide biosynthetic process
EQM13_RS14935	COG2002	toxin-antitoxin pair type II binding
EQM13_RS14940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
EQM13_RS14945	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EQM13_RS14950	COG0193	aminoacyl-tRNA hydrolase activity
EQM13_RS14955	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EQM13_RS14960	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EQM13_RS14970	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EQM13_RS14975	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EQM13_RS14985	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM13_RS14990	COG1024	Enoyl-CoA hydratase
EQM13_RS15000	COG0166	Belongs to the GPI family
EQM13_RS15020	COG0840	transmembrane signaling receptor activity
EQM13_RS15020	COG3290	protein histidine kinase activity
EQM13_RS15030	COG0116	Belongs to the methyltransferase superfamily
EQM13_RS15035	COG2033	superoxide reductase activity
EQM13_RS15040	COG0427	acetyl-CoA hydrolase
EQM13_RS15045	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EQM13_RS15050	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EQM13_RS15055	COG2340	Cysteine-rich secretory protein family
EQM13_RS15060	COG0494	nUDIX hydrolase
EQM13_RS15085	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EQM13_RS15095	COG1752	Esterase of the alpha-beta hydrolase superfamily
EQM13_RS15120	COG0328	RNA-DNA hybrid ribonuclease activity
EQM13_RS15130	COG4221	oxidoreductase activity
EQM13_RS15135	COG0800	Aldolase
EQM13_RS15140	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM13_RS15150	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
EQM13_RS15160	COG2188	Transcriptional regulator
EQM13_RS15165	COG0673	inositol 2-dehydrogenase activity
EQM13_RS15170	COG4821	SIS domain
EQM13_RS15175	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS15175	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS15180	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS15195	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS15195	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS15200	COG2188	Transcriptional regulator
EQM13_RS15215	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EQM13_RS15220	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS15225	COG3715	PTS system
EQM13_RS15230	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS15235	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EQM13_RS15240	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EQM13_RS15245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EQM13_RS15255	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
EQM13_RS15260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS15260	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EQM13_RS15260	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
EQM13_RS15265	COG0561	phosphatase activity
EQM13_RS15275	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EQM13_RS15280	COG1882	Formate acetyltransferase
EQM13_RS15340	COG1331	Highly conserved protein containing a thioredoxin domain
EQM13_RS15345	COG1331	Highly conserved protein containing a thioredoxin domain
EQM13_RS15370	COG0745	RESPONSE REGULATOR receiver
EQM13_RS15375	COG5002	protein histidine kinase activity
EQM13_RS15390	COG2059	Chromate
EQM13_RS15395	COG1442	glycosyl transferase family 8
EQM13_RS15420	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
EQM13_RS15425	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EQM13_RS15445	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
EQM13_RS15475	COG1132	(ABC) transporter
EQM13_RS15480	COG1132	(ABC) transporter
EQM13_RS15500	COG2270	Major facilitator Superfamily
EQM13_RS15505	COG4584	PFAM Integrase catalytic
EQM13_RS15510	COG1484	DNA-dependent DNA replication
EQM13_RS15535	COG1132	(ABC) transporter
EQM13_RS15545	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM13_RS15555	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS15560	COG1126	abc transporter atp-binding protein
EQM13_RS15565	COG0765	amino acid transport
EQM13_RS15570	COG0765	amino acid transport
EQM13_RS15575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EQM13_RS15595	COG1132	(ABC) transporter
EQM13_RS15625	COG5012	cobalamin binding
EQM13_RS15630	COG0577	efflux transmembrane transporter activity
EQM13_RS15635	COG1136	(ABC) transporter
EQM13_RS15640	COG5002	protein histidine kinase activity
EQM13_RS15675	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EQM13_RS15680	COG0006	proline dipeptidase activity
EQM13_RS15690	COG1595	DNA-templated transcription, initiation
EQM13_RS15695	COG1522	sequence-specific DNA binding
EQM13_RS15710	COG1136	(ABC) transporter
EQM13_RS15720	COG2813	Specifically methylates the guanine in position
EQM13_RS15740	COG1309	transcriptional regulator
EQM13_RS15795	COG3142	Participates in the control of copper homeostasis
EQM13_RS15805	COG1263	PTS System
EQM13_RS15805	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS15805	COG2190	(PTS) system
EQM13_RS15820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS15820	COG1263	PTS System
EQM13_RS15825	COG3711	transcriptional antiterminator
EQM13_RS15830	COG1263	PTS System
EQM13_RS15830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS15830	COG2190	(PTS) system
EQM13_RS15840	COG1131	(ABC) transporter
EQM13_RS15900	COG3620	sequence-specific DNA binding
EQM13_RS15955	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EQM13_RS15960	COG3620	sequence-specific DNA binding
EQM13_RS16040	COG5504	Zn-dependent protease
EQM13_RS16045	COG0789	Transcriptional regulator
EQM13_RS16055	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EQM13_RS16080	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
EQM13_RS16090	COG0732	type I restriction modification DNA specificity domain
EQM13_RS16095	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
EQM13_RS16210	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EQM13_RS16255	COG4626	Terminase
EQM13_RS16255	COG1802	Transcriptional regulator
EQM13_RS16265	COG4695	Portal protein
EQM13_RS16270	COG0740	serine-type endopeptidase activity
EQM13_RS16355	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EQM13_RS16370	COG2801	Transposase and inactivated derivatives
EQM13_RS16375	COG3344	reverse transcriptase
EQM13_RS16405	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
EQM13_RS16415	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EQM13_RS16425	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EQM13_RS16435	COG4268	DNA restriction-modification system
EQM13_RS16440	COG1401	restriction endodeoxyribonuclease activity
EQM13_RS16455	COG1199	ATP-dependent helicase activity
EQM13_RS16465	COG1032	radical SAM domain protein
EQM13_RS16475	COG4821	SIS domain
EQM13_RS16490	COG3716	PTS system mannose fructose sorbose family IID component
EQM13_RS16495	COG3715	PTS system
EQM13_RS16500	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS16500	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
EQM13_RS16515	COG3933	PFAM sigma-54 factor interaction domain-containing protein
EQM13_RS16515	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
EQM13_RS16520	COG4720	Psort location CytoplasmicMembrane, score
EQM13_RS16525	COG5001	Diguanylate cyclase
EQM13_RS16525	COG1716	ATPase activity
EQM13_RS16545	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EQM13_RS16550	COG2210	Belongs to the sulfur carrier protein TusA family
EQM13_RS16555	COG3048	D-serine ammonia-lyase activity
EQM13_RS16560	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS16565	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS16570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM13_RS16575	COG0601	transmembrane transport
EQM13_RS16585	COG4166	transmembrane transport
EQM13_RS16605	COG1131	(ABC) transporter
EQM13_RS16610	COG1725	Transcriptional regulator
EQM13_RS16620	COG0516	GMP reductase activity
EQM13_RS16620	COG0517	IMP dehydrogenase activity
EQM13_RS16670	COG1361	Conserved repeat domain
EQM13_RS16695	COG0714	Associated with various cellular activities
EQM13_RS16720	COG1328	CTP reductase activity
EQM13_RS16760	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EQM13_RS16765	COG0740	serine-type endopeptidase activity
EQM13_RS16795	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EQM13_RS16830	COG1131	(ABC) transporter
EQM13_RS16845	COG1132	(ABC) transporter
EQM13_RS16860	COG1131	(ABC) transporter
EQM13_RS16875	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM13_RS16895	COG1304	FMN binding
EQM13_RS16900	COG2094	Belongs to the DNA glycosylase MPG family
EQM13_RS16920	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EQM13_RS16920	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
EQM13_RS16930	COG1012	belongs to the aldehyde dehydrogenase family
EQM13_RS16950	COG3732	PTS system glucitol sorbitol-specific
EQM13_RS16960	COG3730	PTS system glucitol sorbitol-specific
EQM13_RS17000	COG3942	CHAP domain
EQM13_RS17000	COG1388	LysM domain
EQM13_RS17015	COG1242	4 iron, 4 sulfur cluster binding
EQM13_RS17025	COG1063	alcohol dehydrogenase
EQM13_RS17030	COG1979	alcohol dehydrogenase
EQM13_RS17045	COG0701	Predicted permease
EQM13_RS17060	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EQM13_RS17065	COG1121	(ABC) transporter
EQM13_RS17070	COG0803	Belongs to the bacterial solute-binding protein 9 family
EQM13_RS17090	COG0513	Belongs to the DEAD box helicase family
EQM13_RS17095	COG2861	carbohydrate metabolic process
EQM13_RS17125	COG1595	DNA-templated transcription, initiation
EQM13_RS17145	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EQM13_RS17165	COG3464	Transposase
EQM13_RS17200	COG1131	(ABC) transporter
EQM13_RS17235	COG1595	DNA-templated transcription, initiation
EQM13_RS17245	COG0671	phosphoesterase, PA-phosphatase related
EQM13_RS17250	COG0586	Pfam SNARE associated Golgi protein
EQM13_RS17255	COG0745	RESPONSE REGULATOR receiver
EQM13_RS17320	COG1136	(ABC) transporter
EQM13_RS17325	COG5002	protein histidine kinase activity
EQM13_RS17330	COG0745	RESPONSE REGULATOR receiver
EQM13_RS17350	COG2205	protein histidine kinase activity
EQM13_RS17355	COG0745	RESPONSE REGULATOR receiver
EQM13_RS17360	COG0210	DNA helicase
EQM13_RS17430	COG0519	Catalyzes the synthesis of GMP from XMP
EQM13_RS17440	COG1151	hydroxylamine reductase activity
EQM13_RS17460	COG0778	Nitroreductase
EQM13_RS17470	COG0488	(ABC) transporter
EQM13_RS17475	COG1360	Flagellar Motor Protein
EQM13_RS17480	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EQM13_RS17485	COG0488	(ABC) transporter
EQM13_RS17495	COG1063	alcohol dehydrogenase
EQM13_RS17510	COG3711	transcriptional antiterminator
EQM13_RS17515	COG2213	PTS system mannitol-specific
EQM13_RS17530	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
EQM13_RS17545	COG4821	SIS domain
EQM13_RS17550	COG1671	Belongs to the UPF0178 family
EQM13_RS17555	COG0514	ATP-dependent DNA helicase (RecQ)
EQM13_RS17585	COG0745	RESPONSE REGULATOR receiver
EQM13_RS17590	COG5002	protein histidine kinase activity
EQM13_RS17595	COG0704	Plays a role in the regulation of phosphate uptake
EQM13_RS17600	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EQM13_RS17610	COG0573	inorganic phosphate transmembrane transporter activity
EQM13_RS17615	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EQM13_RS17620	COG3842	ATPase activity
EQM13_RS17630	COG1668	transmembrane transport
EQM13_RS17635	COG4555	ABC transporter
EQM13_RS17655	COG0708	Exodeoxyribonuclease III
EQM13_RS17660	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EQM13_RS17665	COG1028	Short-chain dehydrogenase reductase Sdr
EQM13_RS17670	COG0037	tRNA processing
EQM13_RS17675	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
EQM13_RS17685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EQM13_RS17690	COG1234	tRNA 3'-trailer cleavage
EQM13_RS17725	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
EQM13_RS17735	COG0006	proline dipeptidase activity
EQM13_RS17740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM13_RS17745	COG0601	transmembrane transport
EQM13_RS17750	COG4608	Belongs to the ABC transporter superfamily
EQM13_RS17755	COG0444	Belongs to the ABC transporter superfamily
EQM13_RS17780	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EQM13_RS17795	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EQM13_RS17800	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
EQM13_RS17825	COG5002	protein histidine kinase activity
EQM13_RS17845	COG1404	Belongs to the peptidase S8 family
EQM13_RS17850	COG0739	heme binding
EQM13_RS17880	COG1597	lipid kinase activity
EQM13_RS17890	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EQM13_RS17895	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
EQM13_RS17920	COG3385	transposase activity
EQM13_RS17925	COG2801	Transposase and inactivated derivatives
EQM13_RS17990	COG1131	(ABC) transporter
EQM13_RS18015	COG0384	phenazine biosynthesis protein PhzF
EQM13_RS18020	COG1475	DNA binding
EQM13_RS18025	COG1192	Involved in chromosome partitioning
EQM13_RS18030	COG1475	DNA binding
EQM13_RS18035	COG0357	Ribosomal RNA small subunit methyltransferase G
EQM13_RS18040	COG0445	tRNA wobble uridine modification
EQM13_RS18045	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EQM13_RS18050	COG1847	R3H domain protein
EQM13_RS18055	COG0706	membrane insertase activity
EQM13_RS18060	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
EQM13_RS18065	COG0594	ribonuclease P activity
EQM13_RS18070	COG0230	Belongs to the bacterial ribosomal protein bL34 family
EQM13_RS18330	COG1132	(ABC) transporter
EQM13_RS18385	COG0456	acetyltransferase
EQM13_RS18405	COG0791	NLP P60 protein