locus-tag class description EQM13_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix EQM13_RS00005 PF11638 DnaA N-terminal domain EQM13_RS00005 PF00308 Bacterial dnaA protein EQM13_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EQM13_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EQM13_RS00010 PF02767 DNA polymerase III beta subunit, central domain EQM13_RS00020 PF02463 RecF/RecN/SMC N terminal domain EQM13_RS00030 PF00204 DNA gyrase B EQM13_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus EQM13_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS00030 PF01751 Toprim domain EQM13_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller EQM13_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A EQM13_RS00040 PF01740 STAS domain EQM13_RS00045 PF13581 Histidine kinase-like ATPase domain EQM13_RS00050 PF04545 Sigma-70, region 4 EQM13_RS00050 PF04542 Sigma-70 region 2 EQM13_RS00050 PF04539 Sigma-70 region 3 EQM13_RS00075 PF00689 Cation transporting ATPase, C-terminus EQM13_RS00075 PF00690 Cation transporter/ATPase, N-terminus EQM13_RS00080 PF01546 Peptidase family M20/M25/M40 EQM13_RS00085 PF00155 Aminotransferase class I and II EQM13_RS00135 PF00924 Mechanosensitive ion channel EQM13_RS00140 PF06107 Bacterial protein of unknown function (DUF951) EQM13_RS00145 PF00155 Aminotransferase class I and II EQM13_RS00150 PF01250 Ribosomal protein S6 EQM13_RS00155 PF00436 Single-strand binding protein family EQM13_RS00160 PF01084 Ribosomal protein S18 EQM13_RS00175 PF01368 DHH family EQM13_RS00175 PF02272 DHHA1 domain EQM13_RS00180 PF03948 Ribosomal protein L9, C-terminal domain EQM13_RS00180 PF01281 Ribosomal protein L9, N-terminal domain EQM13_RS00185 PF03796 DnaB-like helicase C terminal domain EQM13_RS00185 PF00772 DnaB-like helicase N terminal domain EQM13_RS00205 PF08279 HTH domain EQM13_RS00205 PF02829 3H domain EQM13_RS00215 PF00106 short chain dehydrogenase EQM13_RS00225 PF14437 MafB19-like deaminase EQM13_RS00235 PF00005 ABC transporter EQM13_RS00245 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS00245 PF00072 Response regulator receiver domain EQM13_RS00250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS00295 PF00395 S-layer homology domain EQM13_RS00300 PF04026 SpoVG EQM13_RS00310 PF01478 Type IV leader peptidase family EQM13_RS00310 PF06750 Bacterial Peptidase A24 N-terminal domain EQM13_RS00325 PF00437 Type II/IV secretion system protein EQM13_RS00405 PF01551 Peptidase family M23 EQM13_RS00440 PF08275 DNA primase catalytic core, N-terminal domain EQM13_RS00440 PF01807 CHC2 zinc finger EQM13_RS00465 PF01381 Helix-turn-helix EQM13_RS00470 PF00005 ABC transporter EQM13_RS00480 PF02673 Bacitracin resistance protein BacA EQM13_RS00495 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EQM13_RS00580 PF07690 Major Facilitator Superfamily EQM13_RS00600 PF01047 MarR family EQM13_RS00640 PF04023 FeoA domain EQM13_RS00640 PF07664 Ferrous iron transport protein B C terminus EQM13_RS00640 PF17910 FeoB cytosolic helical domain EQM13_RS00640 PF07670 Nucleoside recognition EQM13_RS00640 PF02421 Ferrous iron transport protein B EQM13_RS00660 PF01066 CDP-alcohol phosphatidyltransferase EQM13_RS00670 PF10609 NUBPL iron-transfer P-loop NTPase EQM13_RS00675 PF02001 Protein of unknown function DUF134 EQM13_RS00680 PF00578 AhpC/TSA family EQM13_RS00685 PF02683 Cytochrome C biogenesis protein transmembrane region EQM13_RS00685 PF11412 Disulphide bond corrector protein DsbC EQM13_RS00690 PF01022 Bacterial regulatory protein, arsR family EQM13_RS00700 PF03611 PTS system sugar-specific permease component EQM13_RS00705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS00710 PF00107 Zinc-binding dehydrogenase EQM13_RS00710 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS00715 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS00725 PF03323 Bacillus/Clostridium GerA spore germination protein EQM13_RS00745 PF00199 Catalase EQM13_RS00745 PF06628 Catalase-related immune-responsive EQM13_RS00745 PF18011 C-terminal domain found in long catalases EQM13_RS00750 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS00750 PF00072 Response regulator receiver domain EQM13_RS00755 PF13426 PAS domain EQM13_RS00755 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS00755 PF00672 HAMP domain EQM13_RS00760 PF00005 ABC transporter EQM13_RS00775 PF00583 Acetyltransferase (GNAT) family EQM13_RS00775 PF13508 Acetyltransferase (GNAT) domain EQM13_RS00790 PF02673 Bacitracin resistance protein BacA EQM13_RS00795 PF00561 alpha/beta hydrolase fold EQM13_RS00795 PF08386 TAP-like protein EQM13_RS00800 PF02277 Phosphoribosyltransferase EQM13_RS00805 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EQM13_RS00810 PF02654 Cobalamin-5-phosphate synthase EQM13_RS00820 PF00749 tRNA synthetases class I (E and Q), catalytic domain EQM13_RS00885 PF16886 ATPsynthase alpha/beta subunit N-term extension EQM13_RS00885 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQM13_RS00885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS00890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS00890 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQM13_RS00895 PF01813 ATP synthase subunit D EQM13_RS00900 PF17863 AAA lid domain EQM13_RS00900 PF07726 ATPase family associated with various cellular activities (AAA) EQM13_RS00905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EQM13_RS00905 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EQM13_RS00905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EQM13_RS00920 PF07670 Nucleoside recognition EQM13_RS00920 PF07664 Ferrous iron transport protein B C terminus EQM13_RS00920 PF02421 Ferrous iron transport protein B EQM13_RS00920 PF17910 FeoB cytosolic helical domain EQM13_RS00925 PF07664 Ferrous iron transport protein B C terminus EQM13_RS00925 PF04023 FeoA domain EQM13_RS00925 PF17910 FeoB cytosolic helical domain EQM13_RS00925 PF02421 Ferrous iron transport protein B EQM13_RS00925 PF07670 Nucleoside recognition EQM13_RS00950 PF00403 Heavy-metal-associated domain EQM13_RS00960 PF02583 Metal-sensitive transcriptional repressor EQM13_RS00965 PF10431 C-terminal, D2-small domain, of ClpB protein EQM13_RS00965 PF17871 AAA lid domain EQM13_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS00965 PF02861 Clp amino terminal domain, pathogenicity island component EQM13_RS00965 PF07724 AAA domain (Cdc48 subfamily) EQM13_RS00970 PF01556 DnaJ C terminal domain EQM13_RS00970 PF00226 DnaJ domain EQM13_RS00975 PF03109 ABC1 family EQM13_RS01000 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS01000 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS01020 PF13186 Iron-sulfur cluster-binding domain EQM13_RS01020 PF04055 Radical SAM superfamily EQM13_RS01025 PF01695 IstB-like ATP binding protein EQM13_RS01040 PF02796 Helix-turn-helix domain of resolvase EQM13_RS01040 PF00665 Integrase core domain EQM13_RS01045 PF00005 ABC transporter EQM13_RS01045 PF00664 ABC transporter transmembrane region EQM13_RS01050 PF12169 DNA polymerase III subunits gamma and tau domain III EQM13_RS01055 PF02575 YbaB/EbfC DNA-binding family EQM13_RS01060 PF02132 RecR protein EQM13_RS01060 PF13662 Toprim domain EQM13_RS01095 PF01555 DNA methylase EQM13_RS01095 PF18273 Type III R-M EcoP15I C-terminal domain EQM13_RS01140 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EQM13_RS01195 PF01751 Toprim domain EQM13_RS01195 PF01131 DNA topoisomerase EQM13_RS01200 PF00145 C-5 cytosine-specific DNA methylase EQM13_RS01210 PF04002 RadC-like JAB domain EQM13_RS01250 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS01250 PF02190 ATP-dependent protease La (LON) substrate-binding domain EQM13_RS01250 PF05362 Lon protease (S16) C-terminal proteolytic domain EQM13_RS01265 PF03432 Relaxase/Mobilisation nuclease domain EQM13_RS01310 PF01695 IstB-like ATP binding protein EQM13_RS01325 PF00717 Peptidase S24-like EQM13_RS01325 PF01726 LexA DNA binding domain EQM13_RS01375 PF02463 RecF/RecN/SMC N terminal domain EQM13_RS01380 PF13361 UvrD-like helicase C-terminal domain EQM13_RS01380 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS01420 PF03796 DnaB-like helicase C terminal domain EQM13_RS01420 PF00772 DnaB-like helicase N terminal domain EQM13_RS01425 PF02899 Phage integrase, N-terminal SAM-like domain EQM13_RS01425 PF00589 Phage integrase family EQM13_RS01430 PF01381 Helix-turn-helix EQM13_RS01445 PF08721 TnsA endonuclease C terminal EQM13_RS01445 PF08722 TnsA endonuclease N terminal EQM13_RS01450 PF00665 Integrase core domain EQM13_RS01455 PF11426 Tn7 transposition regulator TnsC EQM13_RS01455 PF13401 AAA domain EQM13_RS01470 PF01548 Transposase EQM13_RS01470 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS01495 PF03848 Tellurite resistance protein TehB EQM13_RS01525 PF01758 Sodium Bile acid symporter family EQM13_RS01575 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EQM13_RS01600 PF01381 Helix-turn-helix EQM13_RS01625 PF13649 Methyltransferase domain EQM13_RS01640 PF00005 ABC transporter EQM13_RS01655 PF01523 Putative modulator of DNA gyrase EQM13_RS01660 PF01381 Helix-turn-helix EQM13_RS01670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS01675 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS01680 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS01680 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS01685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS01685 PF00005 ABC transporter EQM13_RS01690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS01690 PF00005 ABC transporter EQM13_RS01695 PF01554 MatE EQM13_RS01715 PF03611 PTS system sugar-specific permease component EQM13_RS01725 PF12822 ECF transporter, substrate-specific component EQM13_RS01730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EQM13_RS01730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EQM13_RS01735 PF02954 Bacterial regulatory protein, Fis family EQM13_RS01735 PF13426 PAS domain EQM13_RS01735 PF00158 Sigma-54 interaction domain EQM13_RS01745 PF00676 Dehydrogenase E1 component EQM13_RS01750 PF02779 Transketolase, pyrimidine binding domain EQM13_RS01750 PF02780 Transketolase, C-terminal domain EQM13_RS01755 PF01513 ATP-NAD kinase EQM13_RS01760 PF02817 e3 binding domain EQM13_RS01760 PF00364 Biotin-requiring enzyme EQM13_RS01760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQM13_RS01765 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS01765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQM13_RS01770 PF13607 Succinyl-CoA ligase like flavodoxin domain EQM13_RS01770 PF13380 CoA binding domain EQM13_RS01770 PF00583 Acetyltransferase (GNAT) family EQM13_RS01775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EQM13_RS01775 PF07685 CobB/CobQ-like glutamine amidotransferase domain EQM13_RS01780 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EQM13_RS01780 PF12557 Cob(I)alamin adenosyltransferase N terminal EQM13_RS01785 PF02570 Precorrin-8X methylmutase EQM13_RS01790 PF01888 CbiD EQM13_RS01795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS01800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS01805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS01810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS01815 PF11760 Cobalamin synthesis G N-terminal EQM13_RS01815 PF01890 Cobalamin synthesis G C-terminus EQM13_RS01815 PF11761 Cobalamin biosynthesis central region EQM13_RS01820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS01820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EQM13_RS01825 PF02571 Precorrin-6x reductase CbiJ/CobK EQM13_RS01830 PF06180 Cobalt chelatase (CbiK) EQM13_RS01835 PF01497 Periplasmic binding protein EQM13_RS01840 PF01032 FecCD transport family EQM13_RS01845 PF00005 ABC transporter EQM13_RS01850 PF00557 Metallopeptidase family M24 EQM13_RS01850 PF01321 Creatinase/Prolidase N-terminal domain EQM13_RS01865 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS01870 PF00005 ABC transporter EQM13_RS01880 PF01209 ubiE/COQ5 methyltransferase family EQM13_RS01890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS01900 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS01905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS01905 PF00005 ABC transporter EQM13_RS01910 PF00005 ABC transporter EQM13_RS01910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS01915 PF01546 Peptidase family M20/M25/M40 EQM13_RS01915 PF07687 Peptidase dimerisation domain EQM13_RS01920 PF01979 Amidohydrolase family EQM13_RS01925 PF01979 Amidohydrolase family EQM13_RS01935 PF03051 Peptidase C1-like family EQM13_RS01945 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EQM13_RS01950 PF08666 SAF domain EQM13_RS01950 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus EQM13_RS01970 PF04055 Radical SAM superfamily EQM13_RS01970 PF06463 Molybdenum Cofactor Synthesis C EQM13_RS01980 PF04055 Radical SAM superfamily EQM13_RS01980 PF06463 Molybdenum Cofactor Synthesis C EQM13_RS01990 PF02687 FtsX-like permease family EQM13_RS01995 PF00005 ABC transporter EQM13_RS02010 PF01695 IstB-like ATP binding protein EQM13_RS02020 PF00005 ABC transporter EQM13_RS02030 PF00005 ABC transporter EQM13_RS02030 PF00664 ABC transporter transmembrane region EQM13_RS02055 PF00665 Integrase core domain EQM13_RS02055 PF02796 Helix-turn-helix domain of resolvase EQM13_RS02060 PF00664 ABC transporter transmembrane region EQM13_RS02060 PF00005 ABC transporter EQM13_RS02080 PF04055 Radical SAM superfamily EQM13_RS02080 PF06463 Molybdenum Cofactor Synthesis C EQM13_RS02100 PF00005 ABC transporter EQM13_RS02120 PF12796 Ankyrin repeats (3 copies) EQM13_RS02120 PF13606 Ankyrin repeat EQM13_RS02125 PF00874 PRD domain EQM13_RS02125 PF03123 CAT RNA binding domain EQM13_RS02130 PF01979 Amidohydrolase family EQM13_RS02160 PF03841 L-seryl-tRNA selenium transferase EQM13_RS02165 PF07071 KDGP aldolase EQM13_RS02195 PF00005 ABC transporter EQM13_RS02195 PF13732 Domain of unknown function (DUF4162) EQM13_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS02200 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS02205 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS02205 PF00072 Response regulator receiver domain EQM13_RS02215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS02215 PF00874 PRD domain EQM13_RS02215 PF05043 Mga helix-turn-helix domain EQM13_RS02215 PF08279 HTH domain EQM13_RS02225 PF02378 Phosphotransferase system, EIIC EQM13_RS02235 PF00232 Glycosyl hydrolase family 1 EQM13_RS02240 PF00294 pfkB family carbohydrate kinase EQM13_RS02245 PF00356 Bacterial regulatory proteins, lacI family EQM13_RS02250 PF00795 Carbon-nitrogen hydrolase EQM13_RS02255 PF00892 EamA-like transporter family EQM13_RS02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS02290 PF03611 PTS system sugar-specific permease component EQM13_RS02300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EQM13_RS02300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EQM13_RS02315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS02325 PF03611 PTS system sugar-specific permease component EQM13_RS02330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS02335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS02335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS02340 PF02615 Malate/L-lactate dehydrogenase EQM13_RS02345 PF00701 Dihydrodipicolinate synthetase family EQM13_RS02350 PF04199 Putative cyclase EQM13_RS02355 PF04321 RmlD substrate binding domain EQM13_RS02365 PF01596 O-methyltransferase EQM13_RS02390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EQM13_RS02390 PF02844 Phosphoribosylglycinamide synthetase, N domain EQM13_RS02390 PF02843 Phosphoribosylglycinamide synthetase, C domain EQM13_RS02395 PF01808 AICARFT/IMPCHase bienzyme EQM13_RS02395 PF02142 MGS-like domain EQM13_RS02400 PF00551 Formyl transferase EQM13_RS02405 PF00586 AIR synthase related protein, N-terminal domain EQM13_RS02405 PF02769 AIR synthase related protein, C-terminal domain EQM13_RS02410 PF00156 Phosphoribosyl transferase domain EQM13_RS02415 PF01259 SAICAR synthetase EQM13_RS02420 PF00731 AIR carboxylase EQM13_RS02425 PF02769 AIR synthase related protein, C-terminal domain EQM13_RS02425 PF00586 AIR synthase related protein, N-terminal domain EQM13_RS02425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EQM13_RS02435 PF02595 Glycerate kinase family EQM13_RS02440 PF01244 Membrane dipeptidase (Peptidase family M19) EQM13_RS02465 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS02465 PF00171 Aldehyde dehydrogenase family EQM13_RS02470 PF13180 PDZ domain EQM13_RS02480 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS02480 PF00072 Response regulator receiver domain EQM13_RS02485 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS02485 PF00672 HAMP domain EQM13_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS02490 PF01571 Aminomethyltransferase folate-binding domain EQM13_RS02490 PF08669 Glycine cleavage T-protein C-terminal barrel domain EQM13_RS02495 PF01597 Glycine cleavage H-protein EQM13_RS02500 PF02347 Glycine cleavage system P-protein EQM13_RS02505 PF02347 Glycine cleavage system P-protein EQM13_RS02510 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS02510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQM13_RS02525 PF14693 Ribosomal protein TL5, C-terminal domain EQM13_RS02525 PF01386 Ribosomal L25p family EQM13_RS02530 PF01871 AMMECR1 EQM13_RS02530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EQM13_RS02540 PF01276 Orn/Lys/Arg decarboxylase, major domain EQM13_RS02540 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EQM13_RS02545 PF02223 Thymidylate kinase EQM13_RS02550 PF06153 Cyclic-di-AMP receptor EQM13_RS02555 PF06153 Cyclic-di-AMP receptor EQM13_RS02560 PF09115 DNA polymerase III, delta subunit, C terminal EQM13_RS02565 PF04468 PSP1 C-terminal conserved region EQM13_RS02570 PF12838 4Fe-4S dicluster domain EQM13_RS02575 PF05175 Methyltransferase small domain EQM13_RS02580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS02585 PF18277 AbrB C-terminal domain EQM13_RS02585 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQM13_RS02600 PF07670 Nucleoside recognition EQM13_RS02605 PF07670 Nucleoside recognition EQM13_RS02610 PF06725 3D domain EQM13_RS02615 PF01588 Putative tRNA binding domain EQM13_RS02615 PF09334 tRNA synthetases class I (M) EQM13_RS02615 PF08264 Anticodon-binding domain of tRNA EQM13_RS02620 PF01026 TatD related DNase EQM13_RS02625 PF01751 Toprim domain EQM13_RS02625 PF13331 Domain of unknown function (DUF4093) EQM13_RS02630 PF00398 Ribosomal RNA adenine dimethylase EQM13_RS02640 PF01022 Bacterial regulatory protein, arsR family EQM13_RS02650 PF00462 Glutaredoxin EQM13_RS02675 PF10609 NUBPL iron-transfer P-loop NTPase EQM13_RS02680 PF17676 LD-carboxypeptidase C-terminal domain EQM13_RS02680 PF02016 LD-carboxypeptidase N-terminal domain EQM13_RS02685 PF00107 Zinc-binding dehydrogenase EQM13_RS02685 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS02690 PF04198 Putative sugar-binding domain EQM13_RS02700 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS02705 PF03608 PTS system enzyme II sorbitol-specific factor EQM13_RS02720 PF08486 Stage II sporulation protein EQM13_RS02725 PF06257 Biofilm formation stimulator VEG EQM13_RS02730 PF03734 L,D-transpeptidase catalytic domain EQM13_RS02740 PF08544 GHMP kinases C terminal EQM13_RS02740 PF00288 GHMP kinases N terminal domain EQM13_RS02745 PF03323 Bacillus/Clostridium GerA spore germination protein EQM13_RS02750 PF03845 Spore germination protein EQM13_RS02760 PF09551 Stage II sporulation protein R (spore_II_R) EQM13_RS02765 PF01471 Putative peptidoglycan binding domain EQM13_RS02765 PF07486 Cell Wall Hydrolase EQM13_RS02770 PF14620 YpeB sporulation EQM13_RS02775 PF01177 Asp/Glu/Hydantoin racemase EQM13_RS02780 PF00158 Sigma-54 interaction domain EQM13_RS02780 PF13426 PAS domain EQM13_RS02780 PF02954 Bacterial regulatory protein, Fis family EQM13_RS02790 PF12544 Lysine-2,3-aminomutase EQM13_RS02790 PF04055 Radical SAM superfamily EQM13_RS02800 PF00488 MutS domain V EQM13_RS02800 PF01713 Smr domain EQM13_RS02805 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit EQM13_RS02810 PF02310 B12 binding domain EQM13_RS02810 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase EQM13_RS02835 PF02903 Alpha amylase, N-terminal ig-like domain EQM13_RS02835 PF00128 Alpha amylase, catalytic domain EQM13_RS02835 PF00395 S-layer homology domain EQM13_RS02840 PF17820 PDZ domain EQM13_RS02840 PF03572 Peptidase family S41 EQM13_RS02840 PF01471 Putative peptidoglycan binding domain EQM13_RS02845 PF00395 S-layer homology domain EQM13_RS02885 PF00395 S-layer homology domain EQM13_RS02885 PF02903 Alpha amylase, N-terminal ig-like domain EQM13_RS02885 PF00128 Alpha amylase, catalytic domain EQM13_RS02890 PF01418 Helix-turn-helix domain, rpiR family EQM13_RS02890 PF01380 SIS domain EQM13_RS02895 PF03609 PTS system sorbose-specific iic component EQM13_RS02900 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS02905 PF03830 PTS system sorbose subfamily IIB component EQM13_RS02910 PF00144 Beta-lactamase EQM13_RS02915 PF13580 SIS domain EQM13_RS02925 PF03186 CobD/Cbib protein EQM13_RS02930 PF00082 Subtilase family EQM13_RS02930 PF05922 Peptidase inhibitor I9 EQM13_RS02930 PF05922 Peptidase inhibitor I9 EQM13_RS02930 PF00082 Subtilase family EQM13_RS02935 PF00265 Thymidine kinase EQM13_RS02950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EQM13_RS02950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EQM13_RS02955 PF00696 Amino acid kinase family EQM13_RS02965 PF04227 Indigoidine synthase A like protein EQM13_RS02970 PF13458 Periplasmic binding protein EQM13_RS02975 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS02980 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS02980 PF11862 Domain of unknown function (DUF3382) EQM13_RS02985 PF12399 Branched-chain amino acid ATP-binding cassette transporter EQM13_RS02985 PF00005 ABC transporter EQM13_RS02990 PF00005 ABC transporter EQM13_RS02995 PF00381 PTS HPr component phosphorylation site EQM13_RS03000 PF00874 PRD domain EQM13_RS03000 PF03610 PTS system fructose IIA component EQM13_RS03000 PF00158 Sigma-54 interaction domain EQM13_RS03005 PF03610 PTS system fructose IIA component EQM13_RS03010 PF03830 PTS system sorbose subfamily IIB component EQM13_RS03010 PF03610 PTS system fructose IIA component EQM13_RS03015 PF03609 PTS system sorbose-specific iic component EQM13_RS03020 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS03035 PF13580 SIS domain EQM13_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS03040 PF00107 Zinc-binding dehydrogenase EQM13_RS03045 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS03050 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS03060 PF03023 Lipid II flippase MurJ EQM13_RS03065 PF06426 Serine acetyltransferase, N-terminal EQM13_RS03065 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS03070 PF01381 Helix-turn-helix EQM13_RS03080 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain EQM13_RS03080 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain EQM13_RS03090 PF00963 Cohesin domain EQM13_RS03090 PF00395 S-layer homology domain EQM13_RS03095 PF00746 LPXTG cell wall anchor motif EQM13_RS03095 PF06280 Fn3-like domain EQM13_RS03095 PF00082 Subtilase family EQM13_RS03095 PF02225 PA domain EQM13_RS03100 PF00684 DnaJ central domain EQM13_RS03100 PF01556 DnaJ C terminal domain EQM13_RS03100 PF00226 DnaJ domain EQM13_RS03110 PF00248 Aldo/keto reductase family EQM13_RS03120 PF00117 Glutamine amidotransferase class-I EQM13_RS03120 PF06418 CTP synthase N-terminus EQM13_RS03125 PF00395 S-layer homology domain EQM13_RS03125 PF00963 Cohesin domain EQM13_RS03130 PF00005 ABC transporter EQM13_RS03130 PF12704 MacB-like periplasmic core domain EQM13_RS03130 PF02687 FtsX-like permease family EQM13_RS03140 PF00005 ABC transporter EQM13_RS03145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EQM13_RS03145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EQM13_RS03150 PF03061 Thioesterase superfamily EQM13_RS03155 PF05853 beta-keto acid cleavage enzyme EQM13_RS03160 PF00923 Transaldolase/Fructose-6-phosphate aldolase EQM13_RS03165 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded EQM13_RS03170 PF07497 Rho termination factor, RNA-binding domain EQM13_RS03170 PF07498 Rho termination factor, N-terminal domain EQM13_RS03170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS03175 PF01197 Ribosomal protein L31 EQM13_RS03180 PF07136 Protein of unknown function (DUF1385) EQM13_RS03185 PF17827 PrmC N-terminal domain EQM13_RS03185 PF05175 Methyltransferase small domain EQM13_RS03190 PF00472 RF-1 domain EQM13_RS03190 PF03462 PCRF domain EQM13_RS03195 PF02535 ZIP Zinc transporter EQM13_RS03200 PF03481 Putative GTP-binding controlling metal-binding EQM13_RS03200 PF01300 Telomere recombination EQM13_RS03210 PF02502 Ribose/Galactose Isomerase EQM13_RS03220 PF17099 Tryptophan transporter TrpP EQM13_RS03225 PF00953 Glycosyl transferase family 4 EQM13_RS03230 PF02350 UDP-N-acetylglucosamine 2-epimerase EQM13_RS03235 PF00158 Sigma-54 interaction domain EQM13_RS03235 PF00989 PAS fold EQM13_RS03235 PF02954 Bacterial regulatory protein, Fis family EQM13_RS03240 PF02803 Thiolase, C-terminal domain EQM13_RS03240 PF00108 Thiolase, N-terminal domain EQM13_RS03245 PF01144 Coenzyme A transferase EQM13_RS03250 PF01144 Coenzyme A transferase EQM13_RS03255 PF02080 TrkA-C domain EQM13_RS03255 PF02254 TrkA-N domain EQM13_RS03260 PF02386 Cation transport protein EQM13_RS03270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQM13_RS03275 PF08486 Stage II sporulation protein EQM13_RS03280 PF01551 Peptidase family M23 EQM13_RS03285 PF12116 Stage III sporulation protein D EQM13_RS03295 PF00460 Flagella basal body rod protein EQM13_RS03295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQM13_RS03300 PF00460 Flagella basal body rod protein EQM13_RS03300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQM13_RS03330 PF02772 S-adenosylmethionine synthetase, central domain EQM13_RS03330 PF00438 S-adenosylmethionine synthetase, N-terminal domain EQM13_RS03330 PF02773 S-adenosylmethionine synthetase, C-terminal domain EQM13_RS03340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS03345 PF02378 Phosphotransferase system, EIIC EQM13_RS03350 PF01074 Glycosyl hydrolases family 38 N-terminal domain EQM13_RS03350 PF09261 Alpha mannosidase middle domain EQM13_RS03350 PF07748 Glycosyl hydrolases family 38 C-terminal domain EQM13_RS03355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS03355 PF08279 HTH domain EQM13_RS03355 PF05043 Mga helix-turn-helix domain EQM13_RS03355 PF00874 PRD domain EQM13_RS03360 PF01238 Phosphomannose isomerase type I EQM13_RS03365 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EQM13_RS03365 PF14490 Helix-hairpin-helix containing domain EQM13_RS03365 PF13538 UvrD-like helicase C-terminal domain EQM13_RS03370 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EQM13_RS03370 PF14572 Phosphoribosyl synthetase-associated domain EQM13_RS03390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQM13_RS03390 PF00460 Flagella basal body rod protein EQM13_RS03400 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS03400 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS03405 PF02623 FliW protein EQM13_RS03410 PF02599 Global regulator protein family EQM13_RS03415 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS03415 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS03420 PF02599 Global regulator protein family EQM13_RS03425 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS03425 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS03430 PF01973 Protein of unknown function DUF115 EQM13_RS03445 PF00005 ABC transporter EQM13_RS03445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS03455 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS03455 PF00700 Bacterial flagellin C-terminal helical region EQM13_RS03455 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS03455 PF00669 Bacterial flagellin N-terminal helical region EQM13_RS03465 PF00455 DeoR C terminal sensor domain EQM13_RS03465 PF08220 DeoR-like helix-turn-helix domain EQM13_RS03470 PF04055 Radical SAM superfamily EQM13_RS03475 PF01228 Glycine radical EQM13_RS03475 PF02901 Pyruvate formate lyase-like EQM13_RS03480 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQM13_RS03485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS03490 PF02378 Phosphotransferase system, EIIC EQM13_RS03510 PF00483 Nucleotidyl transferase EQM13_RS03515 PF02348 Cytidylyltransferase EQM13_RS03520 PF02350 UDP-N-acetylglucosamine 2-epimerase EQM13_RS03525 PF08666 SAF domain EQM13_RS03525 PF03102 NeuB family EQM13_RS03545 PF16363 GDP-mannose 4,6 dehydratase EQM13_RS03560 PF05043 Mga helix-turn-helix domain EQM13_RS03560 PF00874 PRD domain EQM13_RS03560 PF08279 HTH domain EQM13_RS03560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS03565 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS03570 PF00107 Zinc-binding dehydrogenase EQM13_RS03570 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS03580 PF00381 PTS HPr component phosphorylation site EQM13_RS03580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS03580 PF05524 PEP-utilising enzyme, N-terminal EQM13_RS03580 PF00391 PEP-utilising enzyme, mobile domain EQM13_RS03580 PF02896 PEP-utilising enzyme, TIM barrel domain EQM13_RS03585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS03590 PF03611 PTS system sugar-specific permease component EQM13_RS03605 PF01261 Xylose isomerase-like TIM barrel EQM13_RS03610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EQM13_RS03610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EQM13_RS03615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS03615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS03620 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS03620 PF00107 Zinc-binding dehydrogenase EQM13_RS03625 PF01820 D-ala D-ala ligase N-terminus EQM13_RS03625 PF07478 D-ala D-ala ligase C-terminus EQM13_RS03630 PF00232 Glycosyl hydrolase family 1 EQM13_RS03640 PF02378 Phosphotransferase system, EIIC EQM13_RS03645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS03650 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) EQM13_RS03655 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQM13_RS03660 PF00874 PRD domain EQM13_RS03660 PF03610 PTS system fructose IIA component EQM13_RS03660 PF00158 Sigma-54 interaction domain EQM13_RS03665 PF01979 Amidohydrolase family EQM13_RS03670 PF00390 Malic enzyme, N-terminal domain EQM13_RS03670 PF03949 Malic enzyme, NAD binding domain EQM13_RS03680 PF05683 Fumarase C-terminus EQM13_RS03680 PF05681 Fumarate hydratase (Fumerase) EQM13_RS03690 PF01381 Helix-turn-helix EQM13_RS03695 PF02915 Rubrerythrin EQM13_RS03705 PF00005 ABC transporter EQM13_RS03735 PF02465 Flagellar hook-associated protein 2 N-terminus EQM13_RS03735 PF07195 Flagellar hook-associated protein 2 C-terminus EQM13_RS03740 PF02561 Flagellar protein FliS EQM13_RS03750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EQM13_RS03750 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EQM13_RS03755 PF07516 SecA Wing and Scaffold domain EQM13_RS03755 PF01043 SecA preprotein cross-linking domain EQM13_RS03755 PF02810 SEC-C motif EQM13_RS03755 PF07517 SecA DEAD-like domain EQM13_RS03760 PF00472 RF-1 domain EQM13_RS03760 PF03462 PCRF domain EQM13_RS03765 PF02743 Cache domain EQM13_RS03765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS03765 PF00672 HAMP domain EQM13_RS03770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS03770 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS03770 PF08447 PAS fold EQM13_RS03770 PF00989 PAS fold EQM13_RS03775 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EQM13_RS03775 PF01276 Orn/Lys/Arg decarboxylase, major domain EQM13_RS03780 PF12822 ECF transporter, substrate-specific component EQM13_RS03785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EQM13_RS03790 PF00814 Glycoprotease family EQM13_RS03800 PF16326 ABC transporter C-terminal domain EQM13_RS03800 PF00005 ABC transporter EQM13_RS03800 PF12848 ABC transporter EQM13_RS03810 PF02629 CoA binding domain EQM13_RS03810 PF06971 Putative DNA-binding protein N-terminus EQM13_RS03815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQM13_RS03815 PF02770 Acyl-CoA dehydrogenase, middle domain EQM13_RS03815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQM13_RS03820 PF01012 Electron transfer flavoprotein domain EQM13_RS03825 PF00766 Electron transfer flavoprotein FAD-binding domain EQM13_RS03825 PF01012 Electron transfer flavoprotein domain EQM13_RS03835 PF04474 Protein of unknown function (DUF554) EQM13_RS03840 PF00166 Chaperonin 10 Kd subunit EQM13_RS03845 PF00118 TCP-1/cpn60 chaperonin family EQM13_RS03850 PF04198 Putative sugar-binding domain EQM13_RS03860 PF08281 Sigma-70, region 4 EQM13_RS03860 PF04542 Sigma-70 region 2 EQM13_RS03895 PF00478 IMP dehydrogenase / GMP reductase domain EQM13_RS03895 PF00571 CBS domain EQM13_RS03900 PF00958 GMP synthase C terminal domain EQM13_RS03900 PF00117 Glutamine amidotransferase class-I EQM13_RS03900 PF02540 NAD synthase EQM13_RS03915 PF06044 Dam-replacing family EQM13_RS03915 PF17726 Dam-replacing HTH domain EQM13_RS03920 PF01048 Phosphorylase superfamily EQM13_RS03925 PF13673 Acetyltransferase (GNAT) domain EQM13_RS03925 PF13302 Acetyltransferase (GNAT) domain EQM13_RS03925 PF00958 GMP synthase C terminal domain EQM13_RS03925 PF03352 Methyladenine glycosylase EQM13_RS03925 PF00117 Glutamine amidotransferase class-I EQM13_RS03935 PF03830 PTS system sorbose subfamily IIB component EQM13_RS03940 PF03609 PTS system sorbose-specific iic component EQM13_RS03945 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS03950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS03950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS03950 PF01842 ACT domain EQM13_RS03960 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EQM13_RS03960 PF01628 HrcA protein C terminal domain EQM13_RS03965 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS03975 PF03610 PTS system fructose IIA component EQM13_RS03980 PF01380 SIS domain EQM13_RS03980 PF00571 CBS domain EQM13_RS03985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS03985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS03995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS03995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS04000 PF00701 Dihydrodipicolinate synthetase family EQM13_RS04005 PF01418 Helix-turn-helix domain, rpiR family EQM13_RS04005 PF01380 SIS domain EQM13_RS04010 PF13520 Amino acid permease EQM13_RS04015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EQM13_RS04015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EQM13_RS04020 PF08279 HTH domain EQM13_RS04020 PF05043 Mga helix-turn-helix domain EQM13_RS04020 PF00874 PRD domain EQM13_RS04020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS04030 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS04045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS04050 PF03611 PTS system sugar-specific permease component EQM13_RS04060 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS04065 PF02954 Bacterial regulatory protein, Fis family EQM13_RS04065 PF13426 PAS domain EQM13_RS04065 PF00158 Sigma-54 interaction domain EQM13_RS04075 PF01008 Initiation factor 2 subunit family EQM13_RS04080 PF12706 Beta-lactamase superfamily domain EQM13_RS04085 PF01371 Trp repressor protein EQM13_RS04090 PF00221 Aromatic amino acid lyase EQM13_RS04095 PF07837 Formiminotransferase domain, N-terminal subdomain EQM13_RS04095 PF02971 Formiminotransferase domain EQM13_RS04105 PF17391 Urocanase N-terminal domain EQM13_RS04105 PF17392 Urocanase C-terminal domain EQM13_RS04105 PF01175 Urocanase Rossmann-like domain EQM13_RS04110 PF01979 Amidohydrolase family EQM13_RS04120 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS04120 PF13361 UvrD-like helicase C-terminal domain EQM13_RS04125 PF12826 Helix-hairpin-helix motif EQM13_RS04125 PF03120 NAD-dependent DNA ligase OB-fold domain EQM13_RS04125 PF01653 NAD-dependent DNA ligase adenylation domain EQM13_RS04125 PF00533 BRCA1 C Terminus (BRCT) domain EQM13_RS04135 PF02686 Glu-tRNAGln amidotransferase C subunit EQM13_RS04140 PF01425 Amidase EQM13_RS04145 PF02637 GatB domain EQM13_RS04145 PF02934 GatB/GatE catalytic domain EQM13_RS04150 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS04155 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS04160 PF00005 ABC transporter EQM13_RS04160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS04165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS04165 PF00005 ABC transporter EQM13_RS04170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS04175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS04185 PF02769 AIR synthase related protein, C-terminal domain EQM13_RS04185 PF00586 AIR synthase related protein, N-terminal domain EQM13_RS04190 PF01520 N-acetylmuramoyl-L-alanine amidase EQM13_RS04195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQM13_RS04205 PF01138 3' exoribonuclease family, domain 1 EQM13_RS04205 PF03725 3' exoribonuclease family, domain 2 EQM13_RS04210 PF01725 Ham1 family EQM13_RS04245 PF01964 Radical SAM ThiC family EQM13_RS04250 PF02110 Hydroxyethylthiazole kinase family EQM13_RS04260 PF02581 Thiamine monophosphate synthase EQM13_RS04260 PF01964 Radical SAM ThiC family EQM13_RS04260 PF13667 ThiC-associated domain EQM13_RS04270 PF01047 MarR family EQM13_RS04290 PF00692 dUTPase EQM13_RS04305 PF01381 Helix-turn-helix EQM13_RS04315 PF02954 Bacterial regulatory protein, Fis family EQM13_RS04315 PF13426 PAS domain EQM13_RS04315 PF00158 Sigma-54 interaction domain EQM13_RS04320 PF13520 Amino acid permease EQM13_RS04325 PF00491 Arginase family EQM13_RS04330 PF17910 FeoB cytosolic helical domain EQM13_RS04330 PF02421 Ferrous iron transport protein B EQM13_RS04330 PF07670 Nucleoside recognition EQM13_RS04330 PF07664 Ferrous iron transport protein B C terminus EQM13_RS04340 PF02742 Iron dependent repressor, metal binding and dimerisation domain EQM13_RS04340 PF01325 Iron dependent repressor, N-terminal DNA binding domain EQM13_RS04345 PF02742 Iron dependent repressor, metal binding and dimerisation domain EQM13_RS04345 PF01325 Iron dependent repressor, N-terminal DNA binding domain EQM13_RS04360 PF00005 ABC transporter EQM13_RS04365 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS04370 PF00005 ABC transporter EQM13_RS04380 PF16491 CAAX prenyl protease N-terminal, five membrane helices EQM13_RS04380 PF01435 Peptidase family M48 EQM13_RS04385 PF04545 Sigma-70, region 4 EQM13_RS04385 PF04539 Sigma-70 region 3 EQM13_RS04385 PF04542 Sigma-70 region 2 EQM13_RS04385 PF00140 Sigma-70 factor, region 1.2 EQM13_RS04390 PF16916 Dimerisation domain of Zinc Transporter EQM13_RS04390 PF01545 Cation efflux family EQM13_RS04395 PF00005 ABC transporter EQM13_RS04405 PF00719 Inorganic pyrophosphatase EQM13_RS04415 PF01554 MatE EQM13_RS04425 PF01554 MatE EQM13_RS04430 PF01979 Amidohydrolase family EQM13_RS04440 PF01496 V-type ATPase 116kDa subunit family EQM13_RS04445 PF00137 ATP synthase subunit C EQM13_RS04450 PF01991 ATP synthase (E/31 kDa) subunit EQM13_RS04460 PF01990 ATP synthase (F/14-kDa) subunit EQM13_RS04465 PF16886 ATPsynthase alpha/beta subunit N-term extension EQM13_RS04465 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQM13_RS04465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS04470 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQM13_RS04470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS04475 PF01813 ATP synthase subunit D EQM13_RS04480 PF01048 Phosphorylase superfamily EQM13_RS04485 PF03951 Glutamine synthetase, beta-Grasp domain EQM13_RS04485 PF00120 Glutamine synthetase, catalytic domain EQM13_RS04490 PF00588 SpoU rRNA Methylase family EQM13_RS04505 PF01256 Carbohydrate kinase EQM13_RS04505 PF03853 YjeF-related protein N-terminus EQM13_RS04515 PF00842 Alanine racemase, C-terminal domain EQM13_RS04515 PF01168 Alanine racemase, N-terminal domain EQM13_RS04525 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EQM13_RS04545 PF13439 Glycosyltransferase Family 4 EQM13_RS04545 PF00534 Glycosyl transferases group 1 EQM13_RS04570 PF03808 Glycosyl transferase WecB/TagA/CpsF family EQM13_RS04575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQM13_RS04575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQM13_RS04580 PF00456 Transketolase, thiamine diphosphate binding domain EQM13_RS04585 PF02779 Transketolase, pyrimidine binding domain EQM13_RS04585 PF02780 Transketolase, C-terminal domain EQM13_RS04595 PF00877 NlpC/P60 family EQM13_RS04595 PF01476 LysM domain EQM13_RS04600 PF01812 5-formyltetrahydrofolate cyclo-ligase family EQM13_RS04605 PF00005 ABC transporter EQM13_RS04610 PF02687 FtsX-like permease family EQM13_RS04610 PF18075 FtsX extracellular domain EQM13_RS04615 PF01551 Peptidase family M23 EQM13_RS04620 PF17820 PDZ domain EQM13_RS04620 PF03572 Peptidase family S41 EQM13_RS04620 PF01471 Putative peptidoglycan binding domain EQM13_RS04635 PF04851 Type III restriction enzyme, res subunit EQM13_RS04635 PF12344 Ultra-violet resistance protein B EQM13_RS04635 PF17757 UvrB interaction domain EQM13_RS04635 PF00271 Helicase conserved C-terminal domain EQM13_RS04635 PF02151 UvrB/uvrC motif EQM13_RS04640 PF17755 UvrA DNA-binding domain EQM13_RS04640 PF17760 UvrA interaction domain EQM13_RS04660 PF01541 GIY-YIG catalytic domain EQM13_RS04660 PF02151 UvrB/uvrC motif EQM13_RS04660 PF08459 UvrC Helix-hairpin-helix N-terminal EQM13_RS04660 PF12826 Helix-hairpin-helix motif EQM13_RS04670 PF07475 HPr Serine kinase C-terminal domain EQM13_RS04670 PF02603 HPr Serine kinase N terminus EQM13_RS04675 PF10371 Domain of unknown function EQM13_RS04675 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EQM13_RS04675 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EQM13_RS04675 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EQM13_RS04675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQM13_RS04680 PF17676 LD-carboxypeptidase C-terminal domain EQM13_RS04680 PF02016 LD-carboxypeptidase N-terminal domain EQM13_RS04690 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EQM13_RS04690 PF01565 FAD binding domain EQM13_RS04695 PF02811 PHP domain EQM13_RS04700 PF03668 P-loop ATPase protein family EQM13_RS04705 PF01933 Uncharacterised protein family UPF0052 EQM13_RS04715 PF00293 NUDIX domain EQM13_RS04720 PF02650 WhiA C-terminal HTH domain EQM13_RS04720 PF10298 WhiA N-terminal LAGLIDADG-like domain EQM13_RS04720 PF14527 WhiA LAGLIDADG-like domain EQM13_RS04725 PF00381 PTS HPr component phosphorylation site EQM13_RS04730 PF07733 Bacterial DNA polymerase III alpha NTPase domain EQM13_RS04730 PF01336 OB-fold nucleic acid binding domain EQM13_RS04730 PF14579 Helix-hairpin-helix motif EQM13_RS04730 PF02811 PHP domain EQM13_RS04730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EQM13_RS04740 PF00365 Phosphofructokinase EQM13_RS04745 PF00224 Pyruvate kinase, barrel domain EQM13_RS04745 PF02887 Pyruvate kinase, alpha/beta domain EQM13_RS04745 PF00391 PEP-utilising enzyme, mobile domain EQM13_RS04750 PF04186 FxsA cytoplasmic membrane protein EQM13_RS04755 PF05958 tRNA (Uracil-5-)-methyltransferase EQM13_RS04755 PF01938 TRAM domain EQM13_RS04825 PF13614 AAA domain EQM13_RS04830 PF17762 HTH domain found in ParB protein EQM13_RS04830 PF02195 ParB-like nuclease domain EQM13_RS04880 PF00877 NlpC/P60 family EQM13_RS04895 PF01751 Toprim domain EQM13_RS04895 PF01131 DNA topoisomerase EQM13_RS04915 PF04002 RadC-like JAB domain EQM13_RS04950 PF03432 Relaxase/Mobilisation nuclease domain EQM13_RS04975 PF01695 IstB-like ATP binding protein EQM13_RS04990 PF02001 Protein of unknown function DUF134 EQM13_RS04995 PF01592 NifU-like N terminal domain EQM13_RS05020 PF10609 NUBPL iron-transfer P-loop NTPase EQM13_RS05040 PF00440 Bacterial regulatory proteins, tetR family EQM13_RS05045 PF03176 MMPL family EQM13_RS05055 PF12838 4Fe-4S dicluster domain EQM13_RS05065 PF02743 Cache domain EQM13_RS05065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS05065 PF00672 HAMP domain EQM13_RS05085 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EQM13_RS05090 PF02796 Helix-turn-helix domain of resolvase EQM13_RS05090 PF00239 Resolvase, N terminal domain EQM13_RS05095 PF01381 Helix-turn-helix EQM13_RS05100 PF01520 N-acetylmuramoyl-L-alanine amidase EQM13_RS05100 PF11741 AMIN domain EQM13_RS05105 PF13302 Acetyltransferase (GNAT) domain EQM13_RS05115 PF02347 Glycine cleavage system P-protein EQM13_RS05120 PF02347 Glycine cleavage system P-protein EQM13_RS05135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS05135 PF01842 ACT domain EQM13_RS05135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS05140 PF00155 Aminotransferase class I and II EQM13_RS05145 PF03606 C4-dicarboxylate anaerobic carrier EQM13_RS05150 PF07969 Amidohydrolase family EQM13_RS05155 PF01757 Acyltransferase family EQM13_RS05160 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase EQM13_RS05165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EQM13_RS05165 PF04055 Radical SAM superfamily EQM13_RS05175 PF01497 Periplasmic binding protein EQM13_RS05180 PF01032 FecCD transport family EQM13_RS05190 PF02514 CobN/Magnesium Chelatase EQM13_RS05190 PF11965 Domain of unknown function (DUF3479) EQM13_RS05195 PF17863 AAA lid domain EQM13_RS05195 PF01078 Magnesium chelatase, subunit ChlI EQM13_RS05200 PF13519 von Willebrand factor type A domain EQM13_RS05200 PF07728 AAA domain (dynein-related subfamily) EQM13_RS05200 PF17863 AAA lid domain EQM13_RS05240 PF01965 DJ-1/PfpI family EQM13_RS05255 PF04954 Siderophore-interacting protein EQM13_RS05255 PF08021 Siderophore-interacting FAD-binding domain EQM13_RS05255 PF00005 ABC transporter EQM13_RS05255 PF00664 ABC transporter transmembrane region EQM13_RS05260 PF00664 ABC transporter transmembrane region EQM13_RS05260 PF00005 ABC transporter EQM13_RS05275 PF00440 Bacterial regulatory proteins, tetR family EQM13_RS05280 PF08021 Siderophore-interacting FAD-binding domain EQM13_RS05280 PF04954 Siderophore-interacting protein EQM13_RS05280 PF00664 ABC transporter transmembrane region EQM13_RS05280 PF00005 ABC transporter EQM13_RS05285 PF00005 ABC transporter EQM13_RS05285 PF00664 ABC transporter transmembrane region EQM13_RS05305 PF01869 BadF/BadG/BcrA/BcrD ATPase family EQM13_RS05320 PF00005 ABC transporter EQM13_RS05320 PF13732 Domain of unknown function (DUF4162) EQM13_RS05340 PF01725 Ham1 family EQM13_RS05350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS05365 PF03611 PTS system sugar-specific permease component EQM13_RS05370 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS05375 PF03610 PTS system fructose IIA component EQM13_RS05375 PF00158 Sigma-54 interaction domain EQM13_RS05375 PF00874 PRD domain EQM13_RS05380 PF09335 SNARE associated Golgi protein EQM13_RS05390 PF00248 Aldo/keto reductase family EQM13_RS05400 PF02645 Uncharacterised protein, DegV family COG1307 EQM13_RS05405 PF00860 Permease family EQM13_RS05410 PF00056 lactate/malate dehydrogenase, NAD binding domain EQM13_RS05410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EQM13_RS05415 PF00117 Glutamine amidotransferase class-I EQM13_RS05415 PF03352 Methyladenine glycosylase EQM13_RS05415 PF13302 Acetyltransferase (GNAT) domain EQM13_RS05415 PF13673 Acetyltransferase (GNAT) domain EQM13_RS05415 PF00958 GMP synthase C terminal domain EQM13_RS05420 PF04463 Protein of unknown function (DUF523) EQM13_RS05425 PF02690 Na+/Pi-cotransporter EQM13_RS05430 PF08543 Phosphomethylpyrimidine kinase EQM13_RS05430 PF02581 Thiamine monophosphate synthase EQM13_RS05435 PF00005 ABC transporter EQM13_RS05435 PF12848 ABC transporter EQM13_RS05435 PF16326 ABC transporter C-terminal domain EQM13_RS05440 PF02583 Metal-sensitive transcriptional repressor EQM13_RS05445 PF00403 Heavy-metal-associated domain EQM13_RS05450 PF00860 Permease family EQM13_RS05465 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EQM13_RS05465 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EQM13_RS05470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQM13_RS05475 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal EQM13_RS05475 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal EQM13_RS05480 PF02803 Thiolase, C-terminal domain EQM13_RS05480 PF00108 Thiolase, N-terminal domain EQM13_RS05485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EQM13_RS05485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EQM13_RS05490 PF00378 Enoyl-CoA hydratase/isomerase EQM13_RS05495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS05495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS05495 PF01842 ACT domain EQM13_RS05500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQM13_RS05500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQM13_RS05500 PF02770 Acyl-CoA dehydrogenase, middle domain EQM13_RS05505 PF01012 Electron transfer flavoprotein domain EQM13_RS05510 PF01012 Electron transfer flavoprotein domain EQM13_RS05510 PF00766 Electron transfer flavoprotein FAD-binding domain EQM13_RS05540 PF09339 IclR helix-turn-helix domain EQM13_RS05540 PF01614 Bacterial transcriptional regulator EQM13_RS05545 PF00682 HMGL-like EQM13_RS05550 PF00330 Aconitase family (aconitate hydratase) EQM13_RS05555 PF00180 Isocitrate/isopropylmalate dehydrogenase EQM13_RS05555 PF18324 Hypothetical protein TT1725 EQM13_RS05560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EQM13_RS05560 PF00364 Biotin-requiring enzyme EQM13_RS05560 PF00289 Biotin carboxylase, N-terminal domain EQM13_RS05560 PF00682 HMGL-like EQM13_RS05560 PF02436 Conserved carboxylase domain EQM13_RS05560 PF02785 Biotin carboxylase C-terminal domain EQM13_RS05565 PF00963 Cohesin domain EQM13_RS05565 PF00395 S-layer homology domain EQM13_RS05570 PF06280 Fn3-like domain EQM13_RS05570 PF00082 Subtilase family EQM13_RS05570 PF00746 LPXTG cell wall anchor motif EQM13_RS05570 PF02225 PA domain EQM13_RS05575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS05585 PF03611 PTS system sugar-specific permease component EQM13_RS05590 PF02126 Phosphotriesterase family EQM13_RS05600 PF01614 Bacterial transcriptional regulator EQM13_RS05600 PF09339 IclR helix-turn-helix domain EQM13_RS05620 PF01118 Semialdehyde dehydrogenase, NAD binding domain EQM13_RS05620 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation EQM13_RS05625 PF00682 HMGL-like EQM13_RS05625 PF07836 DmpG-like communication domain EQM13_RS05640 PF03594 Benzoate membrane transport protein EQM13_RS05645 PF01321 Creatinase/Prolidase N-terminal domain EQM13_RS05645 PF00557 Metallopeptidase family M24 EQM13_RS05675 PF00082 Subtilase family EQM13_RS05675 PF05922 Peptidase inhibitor I9 EQM13_RS05680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EQM13_RS05690 PF00271 Helicase conserved C-terminal domain EQM13_RS05690 PF00176 SNF2 family N-terminal domain EQM13_RS05690 PF12419 SNF2 Helicase protein EQM13_RS05700 PF00709 Adenylosuccinate synthetase EQM13_RS05710 PF00872 Transposase, Mutator family EQM13_RS05715 PF06782 Uncharacterised protein family (UPF0236) EQM13_RS05725 PF01555 DNA methylase EQM13_RS05760 PF00005 ABC transporter EQM13_RS05760 PF00664 ABC transporter transmembrane region EQM13_RS05765 PF00664 ABC transporter transmembrane region EQM13_RS05765 PF00005 ABC transporter EQM13_RS05770 PF06968 Biotin and Thiamin Synthesis associated domain EQM13_RS05770 PF04055 Radical SAM superfamily EQM13_RS05775 PF00156 Phosphoribosyl transferase domain EQM13_RS05780 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EQM13_RS05780 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS05785 PF01180 Dihydroorotate dehydrogenase EQM13_RS05805 PF01470 Pyroglutamyl peptidase EQM13_RS05825 PF00768 D-alanyl-D-alanine carboxypeptidase EQM13_RS05825 PF07943 Penicillin-binding protein 5, C-terminal domain EQM13_RS05885 PF13649 Methyltransferase domain EQM13_RS05895 PF01330 RuvA N terminal domain EQM13_RS05895 PF07499 RuvA, C-terminal domain EQM13_RS05905 PF17783 CvfB-like winged helix domain EQM13_RS05905 PF13509 S1 domain EQM13_RS06015 PF07676 WD40-like Beta Propeller Repeat EQM13_RS06015 PF00326 Prolyl oligopeptidase family EQM13_RS06020 PF01081 KDPG and KHG aldolase EQM13_RS06025 PF03611 PTS system sugar-specific permease component EQM13_RS06030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS06040 PF00072 Response regulator receiver domain EQM13_RS06040 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS06045 PF00672 HAMP domain EQM13_RS06045 PF13426 PAS domain EQM13_RS06045 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS06050 PF00005 ABC transporter EQM13_RS06050 PF00664 ABC transporter transmembrane region EQM13_RS06055 PF00664 ABC transporter transmembrane region EQM13_RS06055 PF00005 ABC transporter EQM13_RS06060 PF13687 Domain of unknown function (DUF4153) EQM13_RS06065 PF03193 RsgA GTPase EQM13_RS06075 PF00571 CBS domain EQM13_RS06075 PF03471 Transporter associated domain EQM13_RS06075 PF01595 Cyclin M transmembrane N-terminal domain EQM13_RS06095 PF00535 Glycosyl transferase family 2 EQM13_RS06095 PF13181 Tetratricopeptide repeat EQM13_RS06100 PF01297 Zinc-uptake complex component A periplasmic EQM13_RS06105 PF00005 ABC transporter EQM13_RS06110 PF00950 ABC 3 transport family EQM13_RS06115 PF00950 ABC 3 transport family EQM13_RS06135 PF01625 Peptide methionine sulfoxide reductase EQM13_RS06140 PF13185 GAF domain EQM13_RS06145 PF02631 RecX family EQM13_RS06155 PF01555 DNA methylase EQM13_RS06160 PF07687 Peptidase dimerisation domain EQM13_RS06160 PF01546 Peptidase family M20/M25/M40 EQM13_RS06170 PF02127 Aminopeptidase I zinc metalloprotease (M18) EQM13_RS06180 PF16199 Radical_SAM C-terminal domain EQM13_RS06180 PF04055 Radical SAM superfamily EQM13_RS06205 PF00849 RNA pseudouridylate synthase EQM13_RS06215 PF00571 CBS domain EQM13_RS06220 PF02743 Cache domain EQM13_RS06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS06220 PF00672 HAMP domain EQM13_RS06225 PF01061 ABC-2 type transporter EQM13_RS06230 PF00005 ABC transporter EQM13_RS06230 PF13732 Domain of unknown function (DUF4162) EQM13_RS06250 PF04960 Glutaminase EQM13_RS06255 PF02954 Bacterial regulatory protein, Fis family EQM13_RS06255 PF13426 PAS domain EQM13_RS06255 PF00158 Sigma-54 interaction domain EQM13_RS06260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS06270 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS06275 PF00005 ABC transporter EQM13_RS06275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS06280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS06280 PF00005 ABC transporter EQM13_RS06285 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain EQM13_RS06285 PF00877 NlpC/P60 family EQM13_RS06290 PF02659 Putative manganese efflux pump EQM13_RS06295 PF01915 Glycosyl hydrolase family 3 C-terminal domain EQM13_RS06295 PF00933 Glycosyl hydrolase family 3 N terminal domain EQM13_RS06305 PF13361 UvrD-like helicase C-terminal domain EQM13_RS06305 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS06305 PF12705 PD-(D/E)XK nuclease superfamily EQM13_RS06325 PF01523 Putative modulator of DNA gyrase EQM13_RS06330 PF00005 ABC transporter EQM13_RS06330 PF00664 ABC transporter transmembrane region EQM13_RS06340 PF00005 ABC transporter EQM13_RS06345 PF01458 Uncharacterized protein family (UPF0051) EQM13_RS06350 PF01458 Uncharacterized protein family (UPF0051) EQM13_RS06355 PF00266 Aminotransferase class-V EQM13_RS06360 PF01592 NifU-like N terminal domain EQM13_RS06370 PF07478 D-ala D-ala ligase C-terminus EQM13_RS06370 PF01820 D-ala D-ala ligase N-terminus EQM13_RS06375 PF04294 VanW like protein EQM13_RS06385 PF00005 ABC transporter EQM13_RS06385 PF00664 ABC transporter transmembrane region EQM13_RS06415 PF00005 ABC transporter EQM13_RS06415 PF00664 ABC transporter transmembrane region EQM13_RS06440 PF00005 ABC transporter EQM13_RS06440 PF17912 MalK OB fold domain EQM13_RS06440 PF03459 TOBE domain EQM13_RS06445 PF00080 Copper/zinc superoxide dismutase (SODC) EQM13_RS06455 PF04308 Ribonuclease H-like EQM13_RS06470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQM13_RS06475 PF00149 Calcineurin-like phosphoesterase EQM13_RS06500 PF00258 Flavodoxin EQM13_RS06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS06515 PF00672 HAMP domain EQM13_RS06515 PF02743 Cache domain EQM13_RS06520 PF02896 PEP-utilising enzyme, TIM barrel domain EQM13_RS06520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EQM13_RS06520 PF00391 PEP-utilising enzyme, mobile domain EQM13_RS06540 PF03180 NLPA lipoprotein EQM13_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS06550 PF00005 ABC transporter EQM13_RS06550 PF09383 NIL domain EQM13_RS06565 PF13419 Haloacid dehalogenase-like hydrolase EQM13_RS06575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EQM13_RS06575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EQM13_RS06580 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain EQM13_RS06580 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain EQM13_RS06585 PF01979 Amidohydrolase family EQM13_RS06590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EQM13_RS06595 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EQM13_RS06600 PF01180 Dihydroorotate dehydrogenase EQM13_RS06605 PF00156 Phosphoribosyl transferase domain EQM13_RS06610 PF00209 Sodium:neurotransmitter symporter family EQM13_RS06615 PF03323 Bacillus/Clostridium GerA spore germination protein EQM13_RS06630 PF00313 'Cold-shock' DNA-binding domain EQM13_RS06635 PF01541 GIY-YIG catalytic domain EQM13_RS06640 PF00579 tRNA synthetases class I (W and Y) EQM13_RS06645 PF01081 KDPG and KHG aldolase EQM13_RS06660 PF01380 SIS domain EQM13_RS06660 PF01418 Helix-turn-helix domain, rpiR family EQM13_RS06665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS06665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS06670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EQM13_RS06670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EQM13_RS06680 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS06685 PF03610 PTS system fructose IIA component EQM13_RS06685 PF03830 PTS system sorbose subfamily IIB component EQM13_RS06690 PF03830 PTS system sorbose subfamily IIB component EQM13_RS06700 PF01066 CDP-alcohol phosphatidyltransferase EQM13_RS06705 PF00158 Sigma-54 interaction domain EQM13_RS06705 PF00874 PRD domain EQM13_RS06705 PF03610 PTS system fructose IIA component EQM13_RS06710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS06715 PF03611 PTS system sugar-specific permease component EQM13_RS06720 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS06720 PF00107 Zinc-binding dehydrogenase EQM13_RS06725 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS06730 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS06735 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS06735 PF00107 Zinc-binding dehydrogenase EQM13_RS06745 PF00133 tRNA synthetases class I (I, L, M and V) EQM13_RS06745 PF10458 Valyl tRNA synthetase tRNA binding arm EQM13_RS06745 PF08264 Anticodon-binding domain of tRNA EQM13_RS06755 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS06755 PF08245 Mur ligase middle domain EQM13_RS06775 PF01522 Polysaccharide deacetylase EQM13_RS06780 PF01225 Mur ligase family, catalytic domain EQM13_RS06780 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS06780 PF08245 Mur ligase middle domain EQM13_RS06795 PF14602 Hexapeptide repeat of succinyl-transferase EQM13_RS06795 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS06795 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EQM13_RS06800 PF05173 Dihydrodipicolinate reductase, C-terminus EQM13_RS06800 PF01113 Dihydrodipicolinate reductase, N-terminus EQM13_RS06805 PF00701 Dihydrodipicolinate synthetase family EQM13_RS06810 PF01118 Semialdehyde dehydrogenase, NAD binding domain EQM13_RS06810 PF02774 Semialdehyde dehydrogenase, dimerisation domain EQM13_RS06825 PF02146 Sir2 family EQM13_RS06830 PF13649 Methyltransferase domain EQM13_RS06835 PF00313 'Cold-shock' DNA-binding domain EQM13_RS06840 PF01430 Hsp33 protein EQM13_RS06870 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS06870 PF00072 Response regulator receiver domain EQM13_RS06875 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS06880 PF00005 ABC transporter EQM13_RS06895 PF04101 Glycosyltransferase family 28 C-terminal domain EQM13_RS06895 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase EQM13_RS06900 PF13419 Haloacid dehalogenase-like hydrolase EQM13_RS06915 PF03129 Anticodon binding domain EQM13_RS06915 PF13393 Histidyl-tRNA synthetase EQM13_RS06920 PF00005 ABC transporter EQM13_RS06920 PF00664 ABC transporter transmembrane region EQM13_RS06925 PF02824 TGS domain EQM13_RS06925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EQM13_RS06925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQM13_RS06925 PF03129 Anticodon binding domain EQM13_RS06930 PF01434 Peptidase family M41 EQM13_RS06930 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS06930 PF17862 AAA+ lid domain EQM13_RS06935 PF00707 Translation initiation factor IF-3, C-terminal domain EQM13_RS06935 PF05198 Translation initiation factor IF-3, N-terminal domain EQM13_RS06940 PF01632 Ribosomal protein L35 EQM13_RS06945 PF00453 Ribosomal protein L20 EQM13_RS06950 PF08032 RNA 2'-O ribose methyltransferase substrate binding EQM13_RS06950 PF00588 SpoU rRNA Methylase family EQM13_RS06955 PF01409 tRNA synthetases class II core domain (F) EQM13_RS06955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EQM13_RS06960 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EQM13_RS06960 PF03483 B3/4 domain EQM13_RS06960 PF03484 tRNA synthetase B5 domain EQM13_RS06960 PF03147 Ferredoxin-fold anticodon binding domain EQM13_RS06960 PF01588 Putative tRNA binding domain EQM13_RS06975 PF00488 MutS domain V EQM13_RS06975 PF01713 Smr domain EQM13_RS06980 PF00750 tRNA synthetases class I (R) EQM13_RS06980 PF03485 Arginyl tRNA synthetase N terminal domain EQM13_RS06980 PF05746 DALR anticodon binding domain EQM13_RS06990 PF02310 B12 binding domain EQM13_RS06990 PF04055 Radical SAM superfamily EQM13_RS07005 PF01515 Phosphate acetyl/butaryl transferase EQM13_RS07105 PF03749 Sugar fermentation stimulation protein RE domain EQM13_RS07105 PF17746 SfsA N-terminal OB domain EQM13_RS07110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS07110 PF00672 HAMP domain EQM13_RS07110 PF02743 Cache domain EQM13_RS07115 PF03062 MBOAT, membrane-bound O-acyltransferase family EQM13_RS07125 PF04397 LytTr DNA-binding domain EQM13_RS07125 PF00072 Response regulator receiver domain EQM13_RS07130 PF04055 Radical SAM superfamily EQM13_RS07130 PF13186 Iron-sulfur cluster-binding domain EQM13_RS07145 PF00005 ABC transporter EQM13_RS07150 PF13186 Iron-sulfur cluster-binding domain EQM13_RS07150 PF04055 Radical SAM superfamily EQM13_RS07160 PF00664 ABC transporter transmembrane region EQM13_RS07160 PF00005 ABC transporter EQM13_RS07165 PF03551 Transcriptional regulator PadR-like family EQM13_RS07170 PF01098 Cell cycle protein EQM13_RS07175 PF01661 Macro domain EQM13_RS07190 PF03772 Competence protein EQM13_RS07190 PF13567 Domain of unknown function (DUF4131) EQM13_RS07190 PF00753 Metallo-beta-lactamase superfamily EQM13_RS07200 PF03590 Aspartate-ammonia ligase EQM13_RS07230 PF02075 Crossover junction endodeoxyribonuclease RuvC EQM13_RS07235 PF01330 RuvA N terminal domain EQM13_RS07235 PF07499 RuvA, C-terminal domain EQM13_RS07240 PF05496 Holliday junction DNA helicase RuvB P-loop domain EQM13_RS07240 PF17864 RuvB AAA lid domain EQM13_RS07240 PF05491 RuvB C-terminal winged helix domain EQM13_RS07245 PF11146 Protein of unknown function (DUF2905) EQM13_RS07250 PF04122 Putative cell wall binding repeat 2 EQM13_RS07250 PF08486 Stage II sporulation protein EQM13_RS07255 PF02547 Queuosine biosynthesis protein EQM13_RS07260 PF01702 Queuine tRNA-ribosyltransferase EQM13_RS07265 PF02699 Preprotein translocase subunit EQM13_RS07290 PF00072 Response regulator receiver domain EQM13_RS07290 PF04397 LytTr DNA-binding domain EQM13_RS07310 PF00005 ABC transporter EQM13_RS07310 PF02687 FtsX-like permease family EQM13_RS07310 PF12704 MacB-like periplasmic core domain EQM13_RS07375 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EQM13_RS07375 PF01368 DHH family EQM13_RS07375 PF02272 DHHA1 domain EQM13_RS07375 PF17768 RecJ OB domain EQM13_RS07380 PF13291 ACT domain EQM13_RS07380 PF04607 Region found in RelA / SpoT proteins EQM13_RS07380 PF02824 TGS domain EQM13_RS07385 PF02580 D-Tyr-tRNA(Tyr) deacylase EQM13_RS07390 PF00753 Metallo-beta-lactamase superfamily EQM13_RS07395 PF04055 Radical SAM superfamily EQM13_RS07400 PF00583 Acetyltransferase (GNAT) family EQM13_RS07410 PF08279 HTH domain EQM13_RS07410 PF00874 PRD domain EQM13_RS07410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS07410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS07410 PF05043 Mga helix-turn-helix domain EQM13_RS07415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS07425 PF02378 Phosphotransferase system, EIIC EQM13_RS07430 PF01546 Peptidase family M20/M25/M40 EQM13_RS07435 PF01112 Asparaginase EQM13_RS07440 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EQM13_RS07445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQM13_RS07445 PF02770 Acyl-CoA dehydrogenase, middle domain EQM13_RS07445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQM13_RS07465 PF00005 ABC transporter EQM13_RS07480 PF00072 Response regulator receiver domain EQM13_RS07480 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS07485 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS07505 PF01695 IstB-like ATP binding protein EQM13_RS07510 PF13302 Acetyltransferase (GNAT) domain EQM13_RS07575 PF00005 ABC transporter EQM13_RS07575 PF00664 ABC transporter transmembrane region EQM13_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS07595 PF17912 MalK OB fold domain EQM13_RS07595 PF00005 ABC transporter EQM13_RS07595 PF03459 TOBE domain EQM13_RS07600 PF03932 CutC family EQM13_RS07620 PF03575 Peptidase family S51 EQM13_RS07625 PF13344 Haloacid dehalogenase-like hydrolase EQM13_RS07625 PF00293 NUDIX domain EQM13_RS07695 PF00300 Histidine phosphatase superfamily (branch 1) EQM13_RS07715 PF01648 4'-phosphopantetheinyl transferase superfamily EQM13_RS07720 PF00501 AMP-binding enzyme EQM13_RS07720 PF00550 Phosphopantetheine attachment site EQM13_RS07720 PF00668 Condensation domain EQM13_RS07720 PF13193 AMP-binding enzyme C-terminal domain EQM13_RS07735 PF00664 ABC transporter transmembrane region EQM13_RS07735 PF00005 ABC transporter EQM13_RS07775 PF02423 Ornithine cyclodeaminase/mu-crystallin family EQM13_RS07780 PF00155 Aminotransferase class I and II EQM13_RS07785 PF03606 C4-dicarboxylate anaerobic carrier EQM13_RS07790 PF00158 Sigma-54 interaction domain EQM13_RS07790 PF13426 PAS domain EQM13_RS07790 PF02954 Bacterial regulatory protein, Fis family EQM13_RS07795 PF01894 Uncharacterised protein family UPF0047 EQM13_RS07825 PF00550 Phosphopantetheine attachment site EQM13_RS07825 PF13193 AMP-binding enzyme C-terminal domain EQM13_RS07825 PF00501 AMP-binding enzyme EQM13_RS07825 PF00668 Condensation domain EQM13_RS07830 PF00501 AMP-binding enzyme EQM13_RS07830 PF00975 Thioesterase domain EQM13_RS07830 PF00668 Condensation domain EQM13_RS07830 PF00550 Phosphopantetheine attachment site EQM13_RS07830 PF13193 AMP-binding enzyme C-terminal domain EQM13_RS07840 PF13649 Methyltransferase domain EQM13_RS07845 PF04198 Putative sugar-binding domain EQM13_RS07845 PF13936 Helix-turn-helix domain EQM13_RS07850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS07855 PF00248 Aldo/keto reductase family EQM13_RS07860 PF03611 PTS system sugar-specific permease component EQM13_RS07865 PF01791 DeoC/LacD family aldolase EQM13_RS07875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS07880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EQM13_RS07880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EQM13_RS07880 PF06827 Zinc finger found in FPG and IleRS EQM13_RS07890 PF00158 Sigma-54 interaction domain EQM13_RS07890 PF00874 PRD domain EQM13_RS07890 PF03610 PTS system fructose IIA component EQM13_RS07900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS07905 PF03611 PTS system sugar-specific permease component EQM13_RS07910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS07910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS07915 PF13378 Enolase C-terminal domain-like EQM13_RS07915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EQM13_RS07920 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component EQM13_RS07930 PF01869 BadF/BadG/BcrA/BcrD ATPase family EQM13_RS07935 PF02645 Uncharacterised protein, DegV family COG1307 EQM13_RS07940 PF01336 OB-fold nucleic acid binding domain EQM13_RS07940 PF02938 GAD domain EQM13_RS07940 PF00152 tRNA synthetases class II (D, K and N) EQM13_RS07960 PF00464 Serine hydroxymethyltransferase EQM13_RS07965 PF14045 YIEGIA protein EQM13_RS07980 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EQM13_RS07980 PF01926 50S ribosome-binding GTPase EQM13_RS07985 PF02660 Glycerol-3-phosphate acyltransferase EQM13_RS07990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EQM13_RS07990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EQM13_RS07995 PF09547 Stage IV sporulation protein A (spore_IV_A) EQM13_RS08005 PF00149 Calcineurin-like phosphoesterase EQM13_RS08010 PF00005 ABC transporter EQM13_RS08015 PF01047 MarR family EQM13_RS08040 PF01934 Protein of unknown function DUF86 EQM13_RS08055 PF01168 Alanine racemase, N-terminal domain EQM13_RS08060 PF04472 Cell division protein SepF EQM13_RS08070 PF17774 Putative RNA-binding domain in YlmH EQM13_RS08070 PF01479 S4 domain EQM13_RS08075 PF05103 DivIVA protein EQM13_RS08085 PF01258 Prokaryotic dksA/traR C4-type zinc finger EQM13_RS08090 PF01252 Signal peptidase (SPase) II EQM13_RS08095 PF00849 RNA pseudouridylate synthase EQM13_RS08095 PF01479 S4 domain EQM13_RS08100 PF00156 Phosphoribosyl transferase domain EQM13_RS08105 PF05670 NFACT protein RNA binding domain EQM13_RS08110 PF03755 YicC-like family, N-terminal region EQM13_RS08110 PF08340 Domain of unknown function (DUF1732) EQM13_RS08115 PF04025 Domain of unknown function (DUF370) EQM13_RS08120 PF00625 Guanylate kinase EQM13_RS08125 PF01192 RNA polymerase Rpb6 EQM13_RS08130 PF04127 DNA / pantothenate metabolism flavoprotein EQM13_RS08130 PF02441 Flavoprotein EQM13_RS08135 PF04851 Type III restriction enzyme, res subunit EQM13_RS08135 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EQM13_RS08135 PF18074 Primosomal protein N C-terminal domain EQM13_RS08135 PF17764 3′ DNA-binding domain (3′BD) EQM13_RS08135 PF00271 Helicase conserved C-terminal domain EQM13_RS08140 PF01327 Polypeptide deformylase EQM13_RS08145 PF00551 Formyl transferase EQM13_RS08145 PF02911 Formyl transferase, C-terminal domain EQM13_RS08150 PF04298 Putative neutral zinc metallopeptidase EQM13_RS08155 PF01189 16S rRNA methyltransferase RsmB/F EQM13_RS08155 PF01029 NusB family EQM13_RS08160 PF04055 Radical SAM superfamily EQM13_RS08170 PF03793 PASTA domain EQM13_RS08170 PF00069 Protein kinase domain EQM13_RS08175 PF03193 RsgA GTPase EQM13_RS08175 PF16745 RsgA N-terminal domain EQM13_RS08180 PF00834 Ribulose-phosphate 3 epimerase family EQM13_RS08200 PF00830 Ribosomal L28 family EQM13_RS08205 PF03780 Asp23 family, cell envelope-related function EQM13_RS08210 PF02734 DAK2 domain EQM13_RS08210 PF13684 Dihydroxyacetone kinase family EQM13_RS08215 PF00270 DEAD/DEAH box helicase EQM13_RS08215 PF17191 RecG wedge domain EQM13_RS08215 PF00271 Helicase conserved C-terminal domain EQM13_RS08225 PF01467 Cytidylyltransferase-like EQM13_RS08235 PF07670 Nucleoside recognition EQM13_RS08240 PF01734 Patatin-like phospholipase EQM13_RS08245 PF05636 HIGH Nucleotidyl Transferase EQM13_RS08250 PF00871 Acetokinase family EQM13_RS08260 PF01783 Ribosomal L32p protein family EQM13_RS08265 PF02504 Fatty acid synthesis protein EQM13_RS08270 PF00550 Phosphopantetheine attachment site EQM13_RS08275 PF14622 Ribonuclease-III-like EQM13_RS08275 PF00035 Double-stranded RNA binding motif EQM13_RS08285 PF06470 SMC proteins Flexible Hinge Domain EQM13_RS08285 PF02463 RecF/RecN/SMC N terminal domain EQM13_RS08290 PF02881 SRP54-type protein, helical bundle domain EQM13_RS08290 PF00448 SRP54-type protein, GTPase domain EQM13_RS08300 PF04297 Putative helix-turn-helix protein, YlxM / p13 like EQM13_RS08305 PF02978 Signal peptide binding domain EQM13_RS08305 PF02881 SRP54-type protein, helical bundle domain EQM13_RS08305 PF00448 SRP54-type protein, GTPase domain EQM13_RS08310 PF00886 Ribosomal protein S16 EQM13_RS08320 PF01782 RimM N-terminal domain EQM13_RS08320 PF05239 PRC-barrel domain EQM13_RS08325 PF01746 tRNA (Guanine-1)-methyltransferase EQM13_RS08330 PF00005 ABC transporter EQM13_RS08330 PF00664 ABC transporter transmembrane region EQM13_RS08335 PF01245 Ribosomal protein L19 EQM13_RS08340 PF01926 50S ribosome-binding GTPase EQM13_RS08345 PF01351 Ribonuclease HII EQM13_RS08355 PF01312 FlhB HrpN YscU SpaS Family EQM13_RS08360 PF02021 Uncharacterised protein family UPF0102 EQM13_RS08365 PF13335 Magnesium chelatase, subunit ChlI C-terminal EQM13_RS08365 PF01078 Magnesium chelatase, subunit ChlI EQM13_RS08370 PF17782 DprA winged helix domain EQM13_RS08370 PF02481 DNA recombination-mediator protein A EQM13_RS08375 PF01751 Toprim domain EQM13_RS08375 PF01396 Topoisomerase DNA binding C4 zinc finger EQM13_RS08375 PF01131 DNA topoisomerase EQM13_RS08380 PF00227 Proteasome subunit EQM13_RS08385 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS08385 PF07724 AAA domain (Cdc48 subfamily) EQM13_RS08385 PF10431 C-terminal, D2-small domain, of ClpB protein EQM13_RS08390 PF06018 CodY GAF-like domain EQM13_RS08390 PF08222 CodY helix-turn-helix domain EQM13_RS08395 PF00460 Flagella basal body rod protein EQM13_RS08400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQM13_RS08400 PF00460 Flagella basal body rod protein EQM13_RS08405 PF02049 Flagellar hook-basal body complex protein FliE EQM13_RS08410 PF08345 Flagellar M-ring protein C-terminal EQM13_RS08410 PF01514 Secretory protein of YscJ/FliF family EQM13_RS08415 PF14841 FliG middle domain EQM13_RS08415 PF14842 FliG N-terminal domain EQM13_RS08415 PF01706 FliG C-terminal domain EQM13_RS08425 PF02874 ATP synthase alpha/beta family, beta-barrel domain EQM13_RS08425 PF18269 T3SS EscN ATPase C-terminal domain EQM13_RS08425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EQM13_RS08445 PF03963 Flagellar hook capping protein - N-terminal region EQM13_RS08455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EQM13_RS08455 PF00460 Flagella basal body rod protein EQM13_RS08455 PF07559 Flagellar basal body protein FlaE EQM13_RS08465 PF01618 MotA/TolQ/ExbB proton channel family EQM13_RS08470 PF00691 OmpA family EQM13_RS08470 PF13677 Membrane MotB of proton-channel complex MotA/MotB EQM13_RS08480 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EQM13_RS08480 PF02154 Flagellar motor switch protein FliM EQM13_RS08485 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EQM13_RS08485 PF04509 CheC-like family EQM13_RS08490 PF00072 Response regulator receiver domain EQM13_RS08500 PF00813 FliP family EQM13_RS08505 PF01313 Bacterial export proteins, family 3 EQM13_RS08510 PF01311 Bacterial export proteins, family 1 EQM13_RS08515 PF01312 FlhB HrpN YscU SpaS Family EQM13_RS08520 PF00771 FHIPEP family EQM13_RS08525 PF00448 SRP54-type protein, GTPase domain EQM13_RS08530 PF10609 NUBPL iron-transfer P-loop NTPase EQM13_RS08540 PF00072 Response regulator receiver domain EQM13_RS08540 PF01339 CheB methylesterase EQM13_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS08545 PF01584 CheW-like domain EQM13_RS08545 PF07194 P2 response regulator binding domain EQM13_RS08545 PF01627 Hpt domain EQM13_RS08545 PF02895 Signal transducing histidine kinase, homodimeric domain EQM13_RS08550 PF01584 CheW-like domain EQM13_RS08555 PF04509 CheC-like family EQM13_RS08560 PF03975 CheD chemotactic sensory transduction EQM13_RS08565 PF04542 Sigma-70 region 2 EQM13_RS08565 PF04539 Sigma-70 region 3 EQM13_RS08565 PF04545 Sigma-70, region 4 EQM13_RS08590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EQM13_RS08590 PF02770 Acyl-CoA dehydrogenase, middle domain EQM13_RS08590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EQM13_RS08595 PF00753 Metallo-beta-lactamase superfamily EQM13_RS08595 PF00258 Flavodoxin EQM13_RS08595 PF00301 Rubredoxin EQM13_RS08600 PF07478 D-ala D-ala ligase C-terminus EQM13_RS08600 PF01820 D-ala D-ala ligase N-terminus EQM13_RS08605 PF00318 Ribosomal protein S2 EQM13_RS08610 PF00889 Elongation factor TS EQM13_RS08615 PF00696 Amino acid kinase family EQM13_RS08620 PF01765 Ribosome recycling factor EQM13_RS08625 PF01255 Putative undecaprenyl diphosphate synthase EQM13_RS08635 PF17820 PDZ domain EQM13_RS08635 PF02163 Peptidase family M50 EQM13_RS08640 PF04551 GcpE protein EQM13_RS08645 PF11490 DNA polymerase III polC-type N-terminus II EQM13_RS08645 PF01336 OB-fold nucleic acid binding domain EQM13_RS08645 PF00929 Exonuclease EQM13_RS08645 PF02811 PHP domain EQM13_RS08645 PF14579 Helix-hairpin-helix motif EQM13_RS08645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EQM13_RS08645 PF07733 Bacterial DNA polymerase III alpha NTPase domain EQM13_RS08650 PF02576 RimP N-terminal domain EQM13_RS08650 PF17384 RimP C-terminal SH3 domain EQM13_RS08655 PF13184 NusA-like KH domain EQM13_RS08655 PF00575 S1 RNA binding domain EQM13_RS08655 PF08529 NusA N-terminal domain EQM13_RS08665 PF00009 Elongation factor Tu GTP binding domain EQM13_RS08665 PF11987 Translation-initiation factor 2 EQM13_RS08665 PF04760 Translation initiation factor IF-2, N-terminal region EQM13_RS08670 PF02033 Ribosome-binding factor A EQM13_RS08675 PF01368 DHH family EQM13_RS08675 PF02272 DHHA1 domain EQM13_RS08680 PF16198 tRNA pseudouridylate synthase B C-terminal domain EQM13_RS08680 PF01509 TruB family pseudouridylate synthase (N terminal domain) EQM13_RS08685 PF06574 FAD synthetase EQM13_RS08685 PF01687 Riboflavin kinase EQM13_RS08690 PF00312 Ribosomal protein S15 EQM13_RS08695 PF00013 KH domain EQM13_RS08695 PF00575 S1 RNA binding domain EQM13_RS08695 PF03725 3' exoribonuclease family, domain 2 EQM13_RS08695 PF01138 3' exoribonuclease family, domain 1 EQM13_RS08695 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EQM13_RS08700 PF01522 Polysaccharide deacetylase EQM13_RS08705 PF00675 Insulinase (Peptidase family M16) EQM13_RS08705 PF05193 Peptidase M16 inactive domain EQM13_RS08710 PF00692 dUTPase EQM13_RS08720 PF13840 ACT domain EQM13_RS08720 PF00696 Amino acid kinase family EQM13_RS08725 PF00574 Clp protease EQM13_RS08730 PF01580 FtsK/SpoIIIE family EQM13_RS08730 PF17854 FtsK alpha domain EQM13_RS08730 PF09397 Ftsk gamma domain EQM13_RS08735 PF18693 TRAM domain EQM13_RS08735 PF00919 Uncharacterized protein family UPF0004 EQM13_RS08735 PF04055 Radical SAM superfamily EQM13_RS08740 PF01066 CDP-alcohol phosphatidyltransferase EQM13_RS08745 PF02464 Competence-damaged protein EQM13_RS08745 PF00994 Probable molybdopterin binding domain EQM13_RS08745 PF18146 Damage-inducible protein CinA KH domain EQM13_RS08750 PF00154 recA bacterial DNA recombination protein EQM13_RS08760 PF02463 RecF/RecN/SMC N terminal domain EQM13_RS08775 PF12072 Domain of unknown function (DUF3552) EQM13_RS08775 PF00013 KH domain EQM13_RS08775 PF01966 HD domain EQM13_RS08780 PF04232 Stage V sporulation protein S (SpoVS) EQM13_RS08785 PF02811 PHP domain EQM13_RS08795 PF00155 Aminotransferase class I and II EQM13_RS08800 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS08805 PF00005 ABC transporter EQM13_RS08820 PF04542 Sigma-70 region 2 EQM13_RS08820 PF08281 Sigma-70, region 4 EQM13_RS08830 PF00005 ABC transporter EQM13_RS08865 PF00005 ABC transporter EQM13_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS08875 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQM13_RS08880 PF01641 SelR domain EQM13_RS08885 PF01614 Bacterial transcriptional regulator EQM13_RS08885 PF09339 IclR helix-turn-helix domain EQM13_RS08890 PF13673 Acetyltransferase (GNAT) domain EQM13_RS08905 PF02899 Phage integrase, N-terminal SAM-like domain EQM13_RS08905 PF00589 Phage integrase family EQM13_RS08910 PF01726 LexA DNA binding domain EQM13_RS08910 PF00717 Peptidase S24-like EQM13_RS08915 PF00834 Ribulose-phosphate 3 epimerase family EQM13_RS08920 PF00923 Transaldolase/Fructose-6-phosphate aldolase EQM13_RS08925 PF08220 DeoR-like helix-turn-helix domain EQM13_RS08925 PF00455 DeoR C terminal sensor domain EQM13_RS08930 PF06838 Methionine gamma-lyase EQM13_RS08935 PF17209 Hfq protein EQM13_RS08945 PF08676 MutL C terminal dimerisation domain EQM13_RS08945 PF01119 DNA mismatch repair protein, C-terminal domain EQM13_RS08950 PF01624 MutS domain I EQM13_RS08950 PF05188 MutS domain II EQM13_RS08950 PF00488 MutS domain V EQM13_RS08950 PF05190 MutS family domain IV EQM13_RS08950 PF05192 MutS domain III EQM13_RS08955 PF04055 Radical SAM superfamily EQM13_RS08955 PF01938 TRAM domain EQM13_RS08955 PF00919 Uncharacterized protein family UPF0004 EQM13_RS08965 PF00155 Aminotransferase class I and II EQM13_RS08975 PF05343 M42 glutamyl aminopeptidase EQM13_RS08980 PF05343 M42 glutamyl aminopeptidase EQM13_RS08985 PF05343 M42 glutamyl aminopeptidase EQM13_RS08990 PF01739 CheR methyltransferase, SAM binding domain EQM13_RS08990 PF03705 CheR methyltransferase, all-alpha domain EQM13_RS08995 PF00575 S1 RNA binding domain EQM13_RS08995 PF02401 LytB protein EQM13_RS09000 PF01553 Acyltransferase EQM13_RS09005 PF02224 Cytidylate kinase EQM13_RS09010 PF07736 Chorismate mutase type I EQM13_RS09025 PF00300 Histidine phosphatase superfamily (branch 1) EQM13_RS09030 PF01380 SIS domain EQM13_RS09030 PF01418 Helix-turn-helix domain, rpiR family EQM13_RS09040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EQM13_RS09045 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg EQM13_RS09045 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase EQM13_RS09045 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II EQM13_RS09055 PF00682 HMGL-like EQM13_RS09055 PF02436 Conserved carboxylase domain EQM13_RS09055 PF00364 Biotin-requiring enzyme EQM13_RS09060 PF06962 Putative rRNA methylase EQM13_RS09070 PF01479 S4 domain EQM13_RS09070 PF00849 RNA pseudouridylate synthase EQM13_RS09080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B EQM13_RS09085 PF00768 D-alanyl-D-alanine carboxypeptidase EQM13_RS09085 PF07943 Penicillin-binding protein 5, C-terminal domain EQM13_RS09090 PF09579 Sporulation protein YtfJ (Spore_YtfJ) EQM13_RS09100 PF04079 Segregation and condensation complex subunit ScpB EQM13_RS09105 PF02616 Segregation and condensation protein ScpA EQM13_RS09110 PF02163 Peptidase family M50 EQM13_RS09115 PF07943 Penicillin-binding protein 5, C-terminal domain EQM13_RS09115 PF00768 D-alanyl-D-alanine carboxypeptidase EQM13_RS09120 PF02885 Glycosyl transferase family, helical bundle domain EQM13_RS09120 PF00591 Glycosyl transferase family, a/b domain EQM13_RS09120 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EQM13_RS09125 PF01048 Phosphorylase superfamily EQM13_RS09130 PF00589 Phage integrase family EQM13_RS09130 PF02899 Phage integrase, N-terminal SAM-like domain EQM13_RS09140 PF00293 NUDIX domain EQM13_RS09155 PF00535 Glycosyl transferase family 2 EQM13_RS09170 PF00072 Response regulator receiver domain EQM13_RS09170 PF08769 Sporulation initiation factor Spo0A C terminal EQM13_RS09195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS09195 PF00005 ABC transporter EQM13_RS09205 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS09210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS09215 PF05580 SpoIVB peptidase S55 EQM13_RS09215 PF17820 PDZ domain EQM13_RS09220 PF13476 AAA domain EQM13_RS09225 PF01316 Arginine repressor, DNA binding domain EQM13_RS09225 PF02863 Arginine repressor, C-terminal domain EQM13_RS09230 PF01479 S4 domain EQM13_RS09230 PF01728 FtsJ-like methyltransferase EQM13_RS09245 PF00348 Polyprenyl synthetase EQM13_RS09250 PF02609 Exonuclease VII small subunit EQM13_RS09255 PF02601 Exonuclease VII, large subunit EQM13_RS09255 PF13742 OB-fold nucleic acid binding domain EQM13_RS09260 PF00814 Glycoprotease family EQM13_RS09265 PF01029 NusB family EQM13_RS09280 PF03780 Asp23 family, cell envelope-related function EQM13_RS09300 PF09546 Stage III sporulation protein AE (spore_III_AE) EQM13_RS09305 PF06686 Stage III sporulation protein AC/AD protein family EQM13_RS09330 PF09285 Elongation factor P, C-terminal EQM13_RS09330 PF08207 Elongation factor P (EF-P) KOW-like domain EQM13_RS09330 PF01132 Elongation factor P (EF-P) OB domain EQM13_RS09360 PF00395 S-layer homology domain EQM13_RS09360 PF00963 Cohesin domain EQM13_RS09380 PF01478 Type IV leader peptidase family EQM13_RS09380 PF06750 Bacterial Peptidase A24 N-terminal domain EQM13_RS09385 PF07963 Prokaryotic N-terminal methylation motif EQM13_RS09385 PF00114 Pilin (bacterial filament) EQM13_RS09390 PF00482 Type II secretion system (T2SS), protein F EQM13_RS09395 PF00437 Type II/IV secretion system protein EQM13_RS09400 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EQM13_RS09400 PF00437 Type II/IV secretion system protein EQM13_RS09405 PF06782 Uncharacterised protein family (UPF0236) EQM13_RS09415 PF08239 Bacterial SH3 domain EQM13_RS09415 PF00877 NlpC/P60 family EQM13_RS09415 PF01476 LysM domain EQM13_RS09420 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS09420 PF07729 FCD domain EQM13_RS09430 PF12838 4Fe-4S dicluster domain EQM13_RS09435 PF05343 M42 glutamyl aminopeptidase EQM13_RS09460 PF05230 MASE2 domain EQM13_RS09460 PF00990 Diguanylate cyclase, GGDEF domain EQM13_RS09475 PF12787 EcsC protein family EQM13_RS09480 PF00155 Aminotransferase class I and II EQM13_RS09495 PF00158 Sigma-54 interaction domain EQM13_RS09495 PF13426 PAS domain EQM13_RS09495 PF02954 Bacterial regulatory protein, Fis family EQM13_RS09505 PF00664 ABC transporter transmembrane region EQM13_RS09505 PF00005 ABC transporter EQM13_RS09510 PF00005 ABC transporter EQM13_RS09510 PF00664 ABC transporter transmembrane region EQM13_RS09520 PF13378 Enolase C-terminal domain-like EQM13_RS09520 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EQM13_RS09545 PF00005 ABC transporter EQM13_RS09550 PF12683 Protein of unknown function (DUF3798) EQM13_RS09555 PF00583 Acetyltransferase (GNAT) family EQM13_RS09570 PF02424 ApbE family EQM13_RS09580 PF13375 RnfC Barrel sandwich hybrid domain EQM13_RS09580 PF13237 4Fe-4S dicluster domain EQM13_RS09580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EQM13_RS09580 PF10531 SLBB domain EQM13_RS09585 PF03116 NQR2, RnfD, RnfE family EQM13_RS09590 PF04205 FMN-binding domain EQM13_RS09595 PF02508 Rnf-Nqr subunit, membrane protein EQM13_RS09600 PF02508 Rnf-Nqr subunit, membrane protein EQM13_RS09605 PF04060 Putative Fe-S cluster EQM13_RS09605 PF13187 4Fe-4S dicluster domain EQM13_RS09605 PF00037 4Fe-4S binding domain EQM13_RS09625 PF03577 Peptidase family C69 EQM13_RS09630 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS09640 PF00107 Zinc-binding dehydrogenase EQM13_RS09640 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS09655 PF03611 PTS system sugar-specific permease component EQM13_RS09665 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS09665 PF00107 Zinc-binding dehydrogenase EQM13_RS09675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQM13_RS09675 PF02403 Seryl-tRNA synthetase N-terminal domain EQM13_RS09715 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS09715 PF01548 Transposase EQM13_RS09720 PF00270 DEAD/DEAH box helicase EQM13_RS09720 PF13749 Putative ATP-dependent DNA helicase recG C-terminal EQM13_RS09720 PF17191 RecG wedge domain EQM13_RS09725 PF00005 ABC transporter EQM13_RS09730 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS09740 PF03051 Peptidase C1-like family EQM13_RS09745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EQM13_RS09745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EQM13_RS09770 PF00266 Aminotransferase class-V EQM13_RS09780 PF09827 CRISPR associated protein Cas2 EQM13_RS09785 PF01867 CRISPR associated protein Cas1 EQM13_RS09795 PF18395 Cas3 C-terminal domain EQM13_RS09795 PF00270 DEAD/DEAH box helicase EQM13_RS09795 PF18019 HD domain EQM13_RS09825 PF01695 IstB-like ATP binding protein EQM13_RS09835 PF09827 CRISPR associated protein Cas2 EQM13_RS09840 PF01867 CRISPR associated protein Cas1 EQM13_RS09850 PF00270 DEAD/DEAH box helicase EQM13_RS09850 PF18395 Cas3 C-terminal domain EQM13_RS09850 PF18019 HD domain EQM13_RS09885 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS09890 PF00107 Zinc-binding dehydrogenase EQM13_RS09890 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS09895 PF00596 Class II Aldolase and Adducin N-terminal domain EQM13_RS09900 PF03830 PTS system sorbose subfamily IIB component EQM13_RS09905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS09905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS09910 PF03609 PTS system sorbose-specific iic component EQM13_RS09915 PF03610 PTS system fructose IIA component EQM13_RS09915 PF03830 PTS system sorbose subfamily IIB component EQM13_RS09920 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS09925 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS09925 PF00107 Zinc-binding dehydrogenase EQM13_RS09930 PF03610 PTS system fructose IIA component EQM13_RS09930 PF00874 PRD domain EQM13_RS09930 PF00158 Sigma-54 interaction domain EQM13_RS09945 PF00005 ABC transporter EQM13_RS09945 PF13732 Domain of unknown function (DUF4162) EQM13_RS09970 PF01979 Amidohydrolase family EQM13_RS09975 PF03606 C4-dicarboxylate anaerobic carrier EQM13_RS09980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EQM13_RS09980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EQM13_RS09980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EQM13_RS09990 PF00534 Glycosyl transferases group 1 EQM13_RS09990 PF13439 Glycosyltransferase Family 4 EQM13_RS10010 PF00005 ABC transporter EQM13_RS10015 PF07730 Histidine kinase EQM13_RS10020 PF00072 Response regulator receiver domain EQM13_RS10020 PF00196 Bacterial regulatory proteins, luxR family EQM13_RS10025 PF02633 Creatinine amidohydrolase EQM13_RS10030 PF04229 GrpB protein EQM13_RS10040 PF01548 Transposase EQM13_RS10040 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS10045 PF00313 'Cold-shock' DNA-binding domain EQM13_RS10060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS10060 PF02378 Phosphotransferase system, EIIC EQM13_RS10060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS10065 PF00834 Ribulose-phosphate 3 epimerase family EQM13_RS10070 PF03437 BtpA family EQM13_RS10075 PF03611 PTS system sugar-specific permease component EQM13_RS10080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS10085 PF05343 M42 glutamyl aminopeptidase EQM13_RS10090 PF08220 DeoR-like helix-turn-helix domain EQM13_RS10090 PF00455 DeoR C terminal sensor domain EQM13_RS10095 PF02633 Creatinine amidohydrolase EQM13_RS10100 PF00005 ABC transporter EQM13_RS10105 PF00005 ABC transporter EQM13_RS10105 PF12399 Branched-chain amino acid ATP-binding cassette transporter EQM13_RS10115 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS10120 PF13458 Periplasmic binding protein EQM13_RS10145 PF03979 Sigma-70 factor, region 1.1 EQM13_RS10145 PF00140 Sigma-70 factor, region 1.2 EQM13_RS10145 PF04542 Sigma-70 region 2 EQM13_RS10145 PF04539 Sigma-70 region 3 EQM13_RS10145 PF04545 Sigma-70, region 4 EQM13_RS10155 PF00270 DEAD/DEAH box helicase EQM13_RS10155 PF08494 DEAD/H associated EQM13_RS10155 PF00271 Helicase conserved C-terminal domain EQM13_RS10190 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EQM13_RS10200 PF18766 SWI2/SNF2 ATPase EQM13_RS10200 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EQM13_RS10200 PF11867 Domain of unknown function (DUF3387) EQM13_RS10220 PF02384 N-6 DNA Methylase EQM13_RS10230 PF07687 Peptidase dimerisation domain EQM13_RS10230 PF01546 Peptidase family M20/M25/M40 EQM13_RS10235 PF03606 C4-dicarboxylate anaerobic carrier EQM13_RS10270 PF03023 Lipid II flippase MurJ EQM13_RS10310 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system EQM13_RS10330 PF00144 Beta-lactamase EQM13_RS10370 PF13508 Acetyltransferase (GNAT) domain EQM13_RS10370 PF00583 Acetyltransferase (GNAT) family EQM13_RS10375 PF02146 Sir2 family EQM13_RS10510 PF06782 Uncharacterised protein family (UPF0236) EQM13_RS10515 PF13361 UvrD-like helicase C-terminal domain EQM13_RS10515 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS10565 PF01695 IstB-like ATP binding protein EQM13_RS10605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQM13_RS10605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EQM13_RS10610 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EQM13_RS10610 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS10620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EQM13_RS10620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EQM13_RS10620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EQM13_RS10625 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS10630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EQM13_RS10640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EQM13_RS10660 PF02397 Bacterial sugar transferase EQM13_RS10670 PF00483 Nucleotidyl transferase EQM13_RS10680 PF02018 Carbohydrate binding domain EQM13_RS10680 PF00395 S-layer homology domain EQM13_RS10680 PF00331 Glycosyl hydrolase family 10 EQM13_RS10680 PF06452 Carbohydrate family 9 binding domain-like EQM13_RS10685 PF00331 Glycosyl hydrolase family 10 EQM13_RS10685 PF06452 Carbohydrate family 9 binding domain-like EQM13_RS10685 PF02018 Carbohydrate binding domain EQM13_RS10685 PF00395 S-layer homology domain EQM13_RS10695 PF13614 AAA domain EQM13_RS10700 PF02706 Chain length determinant protein EQM13_RS10700 PF13807 G-rich domain on putative tyrosine kinase EQM13_RS10705 PF02719 Polysaccharide biosynthesis protein EQM13_RS10710 PF00300 Histidine phosphatase superfamily (branch 1) EQM13_RS10745 PF00072 Response regulator receiver domain EQM13_RS10745 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS10750 PF01522 Polysaccharide deacetylase EQM13_RS10760 PF04542 Sigma-70 region 2 EQM13_RS10760 PF04545 Sigma-70, region 4 EQM13_RS10765 PF03717 Penicillin-binding Protein dimerisation domain EQM13_RS10765 PF00905 Penicillin binding protein transpeptidase domain EQM13_RS10770 PF00485 Phosphoribulokinase / Uridine kinase family EQM13_RS10780 PF01596 O-methyltransferase EQM13_RS10785 PF02618 YceG-like family EQM13_RS10795 PF06133 Control of competence regulator ComK, YlbF/YmcA EQM13_RS10800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EQM13_RS10800 PF00753 Metallo-beta-lactamase superfamily EQM13_RS10800 PF17770 Ribonuclease J C-terminal domain EQM13_RS10805 PF01475 Ferric uptake regulator family EQM13_RS10815 PF03652 Holliday junction resolvase EQM13_RS10825 PF06135 IreB regulatory phosphoprotein EQM13_RS10830 PF02272 DHHA1 domain EQM13_RS10830 PF01411 tRNA synthetases class II (A) EQM13_RS10830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EQM13_RS10835 PF01594 AI-2E family transporter EQM13_RS10845 PF12008 Type I restriction and modification enzyme - subunit R C terminal EQM13_RS10845 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EQM13_RS10845 PF18766 SWI2/SNF2 ATPase EQM13_RS10850 PF01420 Type I restriction modification DNA specificity domain EQM13_RS10855 PF12161 HsdM N-terminal domain EQM13_RS10855 PF02384 N-6 DNA Methylase EQM13_RS10885 PF01592 NifU-like N terminal domain EQM13_RS10890 PF00266 Aminotransferase class-V EQM13_RS10895 PF02082 Transcriptional regulator EQM13_RS10915 PF01370 NAD dependent epimerase/dehydratase family EQM13_RS10920 PF13603 Leucyl-tRNA synthetase, Domain 2 EQM13_RS10920 PF00133 tRNA synthetases class I (I, L, M and V) EQM13_RS10920 PF08264 Anticodon-binding domain of tRNA EQM13_RS10920 PF09334 tRNA synthetases class I (M) EQM13_RS10925 PF01336 OB-fold nucleic acid binding domain EQM13_RS10925 PF00152 tRNA synthetases class II (D, K and N) EQM13_RS10930 PF16193 AAA C-terminal domain EQM13_RS10930 PF05496 Holliday junction DNA helicase RuvB P-loop domain EQM13_RS10930 PF12002 MgsA AAA+ ATPase C terminal EQM13_RS10935 PF01168 Alanine racemase, N-terminal domain EQM13_RS10940 PF13941 MutL protein EQM13_RS10945 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit EQM13_RS10945 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase EQM13_RS10945 PF02310 B12 binding domain EQM13_RS10950 PF16552 D-ornithine 4,5-aminomutase alpha-subunit EQM13_RS10955 PF00291 Pyridoxal-phosphate dependent enzyme EQM13_RS10970 PF02954 Bacterial regulatory protein, Fis family EQM13_RS10970 PF00158 Sigma-54 interaction domain EQM13_RS10970 PF13426 PAS domain EQM13_RS10975 PF16736 Single Cache-like EQM13_RS10975 PF00989 PAS fold EQM13_RS10975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS10975 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS10980 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS10980 PF00072 Response regulator receiver domain EQM13_RS10990 PF03477 ATP cone domain EQM13_RS10995 PF05239 PRC-barrel domain EQM13_RS11000 PF04542 Sigma-70 region 2 EQM13_RS11000 PF04539 Sigma-70 region 3 EQM13_RS11000 PF04545 Sigma-70, region 4 EQM13_RS11005 PF04542 Sigma-70 region 2 EQM13_RS11005 PF04545 Sigma-70, region 4 EQM13_RS11010 PF03419 Sporulation factor SpoIIGA EQM13_RS11015 PF00091 Tubulin/FtsZ family, GTPase domain EQM13_RS11015 PF12327 FtsZ family, C-terminal domain EQM13_RS11020 PF02491 SHS2 domain inserted in FTSA EQM13_RS11025 PF06947 Protein of unknown function (DUF1290) EQM13_RS11040 PF03799 Cell division protein FtsQ EQM13_RS11040 PF08478 POTRA domain, FtsQ-type EQM13_RS11045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQM13_RS11050 PF03033 Glycosyltransferase family 28 N-terminal domain EQM13_RS11050 PF04101 Glycosyltransferase family 28 C-terminal domain EQM13_RS11055 PF01098 Cell cycle protein EQM13_RS11060 PF08245 Mur ligase middle domain EQM13_RS11060 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS11065 PF00953 Glycosyl transferase family 4 EQM13_RS11070 PF01225 Mur ligase family, catalytic domain EQM13_RS11070 PF08245 Mur ligase middle domain EQM13_RS11070 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS11075 PF03793 PASTA domain EQM13_RS11075 PF03717 Penicillin-binding Protein dimerisation domain EQM13_RS11075 PF00905 Penicillin binding protein transpeptidase domain EQM13_RS11085 PF01795 MraW methylase family EQM13_RS11090 PF02381 MraZ protein, putative antitoxin-like EQM13_RS11095 PF01790 Prolipoprotein diacylglyceryl transferase EQM13_RS11100 PF05193 Peptidase M16 inactive domain EQM13_RS11100 PF00675 Insulinase (Peptidase family M16) EQM13_RS11105 PF05193 Peptidase M16 inactive domain EQM13_RS11115 PF06071 Protein of unknown function (DUF933) EQM13_RS11115 PF01926 50S ribosome-binding GTPase EQM13_RS11125 PF01791 DeoC/LacD family aldolase EQM13_RS11130 PF06130 Phosphate propanoyltransferase EQM13_RS11145 PF12822 ECF transporter, substrate-specific component EQM13_RS11160 PF01709 Transcriptional regulator EQM13_RS11165 PF02540 NAD synthase EQM13_RS11170 PF01546 Peptidase family M20/M25/M40 EQM13_RS11175 PF01925 Sulfite exporter TauE/SafE EQM13_RS11180 PF01925 Sulfite exporter TauE/SafE EQM13_RS11190 PF09186 Domain of unknown function (DUF1949) EQM13_RS11190 PF01205 Uncharacterized protein family UPF0029 EQM13_RS11200 PF01926 50S ribosome-binding GTPase EQM13_RS11200 PF13167 GTP-binding GTPase N-terminal EQM13_RS11200 PF16360 GTP-binding GTPase Middle Region EQM13_RS11210 PF00912 Transglycosylase EQM13_RS11210 PF00905 Penicillin binding protein transpeptidase domain EQM13_RS11215 PF03862 SpoVAC/SpoVAEB sporulation membrane protein EQM13_RS11220 PF07451 Stage V sporulation protein AD (SpoVAD) EQM13_RS11225 PF03862 SpoVAC/SpoVAEB sporulation membrane protein EQM13_RS11235 PF12164 Stage V sporulation protein AA EQM13_RS11240 PF04545 Sigma-70, region 4 EQM13_RS11240 PF04539 Sigma-70 region 3 EQM13_RS11240 PF04542 Sigma-70 region 2 EQM13_RS11245 PF13581 Histidine kinase-like ATPase domain EQM13_RS11250 PF01740 STAS domain EQM13_RS11255 PF00877 NlpC/P60 family EQM13_RS11255 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain EQM13_RS11260 PF03706 Lysylphosphatidylglycerol synthase TM region EQM13_RS11260 PF09924 Uncharacterised conserved protein (DUF2156) EQM13_RS11265 PF00899 ThiF family EQM13_RS11305 PF01784 NIF3 (NGG1p interacting factor 3) EQM13_RS11310 PF17827 PrmC N-terminal domain EQM13_RS11310 PF05175 Methyltransferase small domain EQM13_RS11315 PF03979 Sigma-70 factor, region 1.1 EQM13_RS11315 PF00140 Sigma-70 factor, region 1.2 EQM13_RS11315 PF04542 Sigma-70 region 2 EQM13_RS11315 PF04539 Sigma-70 region 3 EQM13_RS11315 PF04545 Sigma-70, region 4 EQM13_RS11320 PF10410 DnaB-helicase binding domain of primase EQM13_RS11320 PF08275 DNA primase catalytic core, N-terminal domain EQM13_RS11320 PF01807 CHC2 zinc finger EQM13_RS11325 PF01966 HD domain EQM13_RS11325 PF13286 Phosphohydrolase-associated domain EQM13_RS11330 PF03618 Kinase/pyrophosphorylase EQM13_RS11335 PF08279 HTH domain EQM13_RS11335 PF00571 CBS domain EQM13_RS11340 PF05746 DALR anticodon binding domain EQM13_RS11340 PF02092 Glycyl-tRNA synthetase beta subunit EQM13_RS11345 PF02091 Glycyl-tRNA synthetase alpha subunit EQM13_RS11355 PF02565 Recombination protein O C terminal EQM13_RS11355 PF11967 Recombination protein O N terminal EQM13_RS11360 PF07650 KH domain EQM13_RS11360 PF01926 50S ribosome-binding GTPase EQM13_RS11365 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EQM13_RS11370 PF17479 Protein of unknown function (DUF3048) C-terminal domain EQM13_RS11370 PF11258 Protein of unknown function (DUF3048) N-terminal domain EQM13_RS11375 PF01219 Prokaryotic diacylglycerol kinase EQM13_RS11380 PF02130 Uncharacterized protein family UPF0054 EQM13_RS11385 PF07698 7TM receptor with intracellular HD hydrolase EQM13_RS11385 PF07697 7TM-HD extracellular EQM13_RS11385 PF01966 HD domain EQM13_RS11390 PF02562 PhoH-like protein EQM13_RS11395 PF06898 Putative stage IV sporulation protein YqfD EQM13_RS11400 PF07873 YabP family EQM13_RS11410 PF12127 SigmaW regulon antibacterial EQM13_RS11415 PF01972 Serine dehydrogenase proteinase EQM13_RS11415 PF01957 NfeD-like C-terminal, partner-binding EQM13_RS11420 PF09424 Yqey-like protein EQM13_RS11425 PF01165 Ribosomal protein S21 EQM13_RS11430 PF01230 HIT domain EQM13_RS11435 PF01938 TRAM domain EQM13_RS11435 PF00919 Uncharacterized protein family UPF0004 EQM13_RS11435 PF04055 Radical SAM superfamily EQM13_RS11440 PF04452 RNA methyltransferase EQM13_RS11450 PF01556 DnaJ C terminal domain EQM13_RS11450 PF00684 DnaJ central domain EQM13_RS11450 PF00226 DnaJ domain EQM13_RS11455 PF00012 Hsp70 protein EQM13_RS11460 PF01025 GrpE EQM13_RS11465 PF01628 HrcA protein C terminal domain EQM13_RS11470 PF06969 HemN C-terminal domain EQM13_RS11470 PF04055 Radical SAM superfamily EQM13_RS11475 PF00009 Elongation factor Tu GTP binding domain EQM13_RS11475 PF14492 Elongation Factor G, domain II EQM13_RS11475 PF00679 Elongation factor G C-terminus EQM13_RS11475 PF03144 Elongation factor Tu domain 2 EQM13_RS11475 PF06421 GTP-binding protein LepA C-terminus EQM13_RS11485 PF10502 Signal peptidase, peptidase S26 EQM13_RS11495 PF03418 Germination protease EQM13_RS11500 PF01649 Ribosomal protein S20 EQM13_RS11505 PF06144 DNA polymerase III, delta subunit EQM13_RS11510 PF03772 Competence protein EQM13_RS11510 PF00753 Metallo-beta-lactamase superfamily EQM13_RS11510 PF13567 Domain of unknown function (DUF4131) EQM13_RS11515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EQM13_RS11515 PF01411 tRNA synthetases class II (A) EQM13_RS11515 PF02272 DHHA1 domain EQM13_RS11525 PF00881 Nitroreductase family EQM13_RS11535 PF00155 Aminotransferase class I and II EQM13_RS11540 PF02548 Ketopantoate hydroxymethyltransferase EQM13_RS11550 PF01235 Sodium:alanine symporter family EQM13_RS11565 PF00005 ABC transporter EQM13_RS11565 PF00664 ABC transporter transmembrane region EQM13_RS11570 PF00005 ABC transporter EQM13_RS11570 PF00664 ABC transporter transmembrane region EQM13_RS11580 PF05036 Sporulation related domain EQM13_RS11580 PF01520 N-acetylmuramoyl-L-alanine amidase EQM13_RS11585 PF01548 Transposase EQM13_RS11585 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS11610 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS11610 PF16736 Single Cache-like EQM13_RS11610 PF00989 PAS fold EQM13_RS11615 PF00072 Response regulator receiver domain EQM13_RS11615 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS11620 PF00009 Elongation factor Tu GTP binding domain EQM13_RS11620 PF09106 Elongation factor SelB, winged helix EQM13_RS11620 PF09105 Elongation factor SelB, winged helix EQM13_RS11620 PF03144 Elongation factor Tu domain 2 EQM13_RS11620 PF09107 Elongation factor SelB, winged helix EQM13_RS11625 PF12390 Selenocysteine synthase N terminal EQM13_RS11625 PF03841 L-seryl-tRNA selenium transferase EQM13_RS11640 PF00768 D-alanyl-D-alanine carboxypeptidase EQM13_RS11640 PF07943 Penicillin-binding protein 5, C-terminal domain EQM13_RS11645 PF01042 Endoribonuclease L-PSP EQM13_RS11655 PF03816 Cell envelope-related transcriptional attenuator domain EQM13_RS11660 PF01966 HD domain EQM13_RS11665 PF01467 Cytidylyltransferase-like EQM13_RS11680 PF09269 Domain of unknown function (DUF1967) EQM13_RS11680 PF01018 GTP1/OBG EQM13_RS11680 PF01926 50S ribosome-binding GTPase EQM13_RS11685 PF01016 Ribosomal L27 protein EQM13_RS11695 PF00829 Ribosomal prokaryotic L21 protein EQM13_RS11700 PF00575 S1 RNA binding domain EQM13_RS11700 PF10150 Ribonuclease E/G family EQM13_RS11710 PF00919 Uncharacterized protein family UPF0004 EQM13_RS11710 PF18693 TRAM domain EQM13_RS11710 PF04055 Radical SAM superfamily EQM13_RS11720 PF03776 Septum formation topological specificity factor MinE EQM13_RS11725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EQM13_RS11730 PF03775 Septum formation inhibitor MinC, C-terminal domain EQM13_RS11755 PF04002 RadC-like JAB domain EQM13_RS11760 PF02545 Maf-like protein EQM13_RS11795 PF13581 Histidine kinase-like ATPase domain EQM13_RS11810 PF00005 ABC transporter EQM13_RS11815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS11820 PF00072 Response regulator receiver domain EQM13_RS11820 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS11835 PF00005 ABC transporter EQM13_RS11840 PF00072 Response regulator receiver domain EQM13_RS11840 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS11845 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS11845 PF08448 PAS fold EQM13_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS11845 PF13426 PAS domain EQM13_RS11845 PF00072 Response regulator receiver domain EQM13_RS11890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS11900 PF01121 Dephospho-CoA kinase EQM13_RS11905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EQM13_RS11905 PF00476 DNA polymerase family A EQM13_RS11905 PF01367 5'-3' exonuclease, C-terminal SAM fold EQM13_RS11925 PF00664 ABC transporter transmembrane region EQM13_RS11925 PF00005 ABC transporter EQM13_RS11945 PF03610 PTS system fructose IIA component EQM13_RS11945 PF03830 PTS system sorbose subfamily IIB component EQM13_RS11950 PF01081 KDPG and KHG aldolase EQM13_RS11965 PF01544 CorA-like Mg2+ transporter protein EQM13_RS11995 PF00654 Voltage gated chloride channel EQM13_RS12005 PF00005 ABC transporter EQM13_RS12020 PF00664 ABC transporter transmembrane region EQM13_RS12020 PF00005 ABC transporter EQM13_RS12025 PF00664 ABC transporter transmembrane region EQM13_RS12025 PF00005 ABC transporter EQM13_RS12030 PF00733 Asparagine synthase EQM13_RS12030 PF13537 Glutamine amidotransferase domain EQM13_RS12035 PF01569 PAP2 superfamily EQM13_RS12040 PF02687 FtsX-like permease family EQM13_RS12040 PF00005 ABC transporter EQM13_RS12040 PF12704 MacB-like periplasmic core domain EQM13_RS12050 PF03099 Biotin/lipoate A/B protein ligase family EQM13_RS12050 PF10437 Bacterial lipoate protein ligase C-terminus EQM13_RS12055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EQM13_RS12055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EQM13_RS12055 PF18267 Rubredoxin NAD+ reductase C-terminal domain EQM13_RS12055 PF04324 BFD-like [2Fe-2S] binding domain EQM13_RS12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS12060 PF13416 Bacterial extracellular solute-binding protein EQM13_RS12065 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS12070 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS12075 PF08402 TOBE domain EQM13_RS12075 PF00005 ABC transporter EQM13_RS12080 PF07883 Cupin domain EQM13_RS12080 PF01381 Helix-turn-helix EQM13_RS12090 PF04011 LemA family EQM13_RS12105 PF02926 THUMP domain EQM13_RS12105 PF02568 Thiamine biosynthesis protein (ThiI) EQM13_RS12110 PF00266 Aminotransferase class-V EQM13_RS12115 PF00710 Asparaginase, N-terminal EQM13_RS12115 PF17763 Glutaminase/Asparaginase C-terminal domain EQM13_RS12135 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EQM13_RS12135 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EQM13_RS12140 PF07670 Nucleoside recognition EQM13_RS12145 PF07670 Nucleoside recognition EQM13_RS12150 PF00963 Cohesin domain EQM13_RS12150 PF00395 S-layer homology domain EQM13_RS12155 PF07581 The GLUG motif EQM13_RS12155 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) EQM13_RS12160 PF01869 BadF/BadG/BcrA/BcrD ATPase family EQM13_RS12180 PF02811 PHP domain EQM13_RS12180 PF00929 Exonuclease EQM13_RS12180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EQM13_RS12180 PF07733 Bacterial DNA polymerase III alpha NTPase domain EQM13_RS12180 PF14579 Helix-hairpin-helix motif EQM13_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EQM13_RS12325 PF03466 LysR substrate binding domain EQM13_RS12330 PF02127 Aminopeptidase I zinc metalloprotease (M18) EQM13_RS12335 PF00196 Bacterial regulatory proteins, luxR family EQM13_RS12335 PF00072 Response regulator receiver domain EQM13_RS12340 PF05384 Sensor protein DegS EQM13_RS12340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS12340 PF07730 Histidine kinase EQM13_RS12345 PF01584 CheW-like domain EQM13_RS12355 PF00356 Bacterial regulatory proteins, lacI family EQM13_RS12360 PF00990 Diguanylate cyclase, GGDEF domain EQM13_RS12365 PF01047 MarR family EQM13_RS12370 PF00781 Diacylglycerol kinase catalytic domain EQM13_RS12380 PF00664 ABC transporter transmembrane region EQM13_RS12380 PF00005 ABC transporter EQM13_RS12385 PF00664 ABC transporter transmembrane region EQM13_RS12385 PF00005 ABC transporter EQM13_RS12395 PF01978 Sugar-specific transcriptional regulator TrmB EQM13_RS12395 PF11495 Archaeal transcriptional regulator TrmB EQM13_RS12405 PF02423 Ornithine cyclodeaminase/mu-crystallin family EQM13_RS12420 PF01053 Cys/Met metabolism PLP-dependent enzyme EQM13_RS12430 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EQM13_RS12430 PF05221 S-adenosyl-L-homocysteine hydrolase EQM13_RS12435 PF02687 FtsX-like permease family EQM13_RS12435 PF12704 MacB-like periplasmic core domain EQM13_RS12435 PF00005 ABC transporter EQM13_RS12440 PF13426 PAS domain EQM13_RS12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS12440 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS12440 PF00672 HAMP domain EQM13_RS12445 PF00072 Response regulator receiver domain EQM13_RS12445 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS12450 PF03853 YjeF-related protein N-terminus EQM13_RS12455 PF01212 Beta-eliminating lyase EQM13_RS12465 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS12465 PF17862 AAA+ lid domain EQM13_RS12465 PF01434 Peptidase family M41 EQM13_RS12470 PF02554 Carbon starvation protein CstA EQM13_RS12470 PF13722 5TM C-terminal transporter carbon starvation CstA EQM13_RS12485 PF00849 RNA pseudouridylate synthase EQM13_RS12490 PF01513 ATP-NAD kinase EQM13_RS12495 PF08439 Oligopeptidase F EQM13_RS12495 PF01432 Peptidase family M3 EQM13_RS12500 PF00905 Penicillin binding protein transpeptidase domain EQM13_RS12505 PF01098 Cell cycle protein EQM13_RS12510 PF16697 Inner membrane component of T3SS, cytoplasmic domain EQM13_RS12520 PF01255 Putative undecaprenyl diphosphate synthase EQM13_RS12525 PF03315 Serine dehydratase beta chain EQM13_RS12530 PF03313 Serine dehydratase alpha chain EQM13_RS12535 PF01467 Cytidylyltransferase-like EQM13_RS12565 PF01867 CRISPR associated protein Cas1 EQM13_RS12605 PF00857 Isochorismatase family EQM13_RS12610 PF00578 AhpC/TSA family EQM13_RS12620 PF16326 ABC transporter C-terminal domain EQM13_RS12620 PF12848 ABC transporter EQM13_RS12620 PF00005 ABC transporter EQM13_RS12630 PF00293 NUDIX domain EQM13_RS12635 PF00665 Integrase core domain EQM13_RS12635 PF02796 Helix-turn-helix domain of resolvase EQM13_RS12655 PF00005 ABC transporter EQM13_RS12670 PF00005 ABC transporter EQM13_RS12675 PF01209 ubiE/COQ5 methyltransferase family EQM13_RS12685 PF00005 ABC transporter EQM13_RS12690 PF02517 CPBP intramembrane metalloprotease EQM13_RS12710 PF01695 IstB-like ATP binding protein EQM13_RS12735 PF07690 Major Facilitator Superfamily EQM13_RS12750 PF00005 ABC transporter EQM13_RS12750 PF00664 ABC transporter transmembrane region EQM13_RS12765 PF00005 ABC transporter EQM13_RS12810 PF04397 LytTr DNA-binding domain EQM13_RS12810 PF00072 Response regulator receiver domain EQM13_RS12815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EQM13_RS12815 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EQM13_RS12815 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS12820 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EQM13_RS12820 PF00037 4Fe-4S binding domain EQM13_RS12820 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EQM13_RS12830 PF06782 Uncharacterised protein family (UPF0236) EQM13_RS12835 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain EQM13_RS12835 PF06165 Glycosyltransferase family 36 EQM13_RS12835 PF10091 Putative glucoamylase EQM13_RS12840 PF00483 Nucleotidyl transferase EQM13_RS12845 PF00664 ABC transporter transmembrane region EQM13_RS12845 PF00005 ABC transporter EQM13_RS12850 PF00664 ABC transporter transmembrane region EQM13_RS12850 PF00005 ABC transporter EQM13_RS12855 PF02310 B12 binding domain EQM13_RS12855 PF04055 Radical SAM superfamily EQM13_RS12865 PF05193 Peptidase M16 inactive domain EQM13_RS12865 PF00675 Insulinase (Peptidase family M16) EQM13_RS12870 PF01695 IstB-like ATP binding protein EQM13_RS12880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EQM13_RS12880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EQM13_RS12880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EQM13_RS12880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EQM13_RS12885 PF01546 Peptidase family M20/M25/M40 EQM13_RS12885 PF07687 Peptidase dimerisation domain EQM13_RS12900 PF00293 NUDIX domain EQM13_RS12910 PF12849 PBP superfamily domain EQM13_RS12915 PF02080 TrkA-C domain EQM13_RS12915 PF02254 TrkA-N domain EQM13_RS12920 PF02080 TrkA-C domain EQM13_RS12920 PF02254 TrkA-N domain EQM13_RS12925 PF00690 Cation transporter/ATPase, N-terminus EQM13_RS12925 PF00689 Cation transporting ATPase, C-terminus EQM13_RS12935 PF01668 SmpB protein EQM13_RS12940 PF08206 Ribonuclease B OB domain EQM13_RS12940 PF00575 S1 RNA binding domain EQM13_RS12940 PF00773 RNB domain EQM13_RS12940 PF17876 Cold shock domain EQM13_RS12945 PF01820 D-ala D-ala ligase N-terminus EQM13_RS12945 PF07478 D-ala D-ala ligase C-terminus EQM13_RS12950 PF01225 Mur ligase family, catalytic domain EQM13_RS12950 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS12950 PF08245 Mur ligase middle domain EQM13_RS12955 PF12146 Serine aminopeptidase, S33 EQM13_RS12965 PF03952 Enolase, N-terminal domain EQM13_RS12965 PF00113 Enolase, C-terminal TIM barrel domain EQM13_RS12970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EQM13_RS12970 PF01676 Metalloenzyme superfamily EQM13_RS12975 PF00121 Triosephosphate isomerase EQM13_RS12980 PF00162 Phosphoglycerate kinase EQM13_RS12985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EQM13_RS12985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EQM13_RS12990 PF04198 Putative sugar-binding domain EQM13_RS12995 PF00309 Sigma-54 factor, Activator interacting domain (AID) EQM13_RS12995 PF04963 Sigma-54 factor, core binding domain EQM13_RS12995 PF04552 Sigma-54, DNA binding domain EQM13_RS13015 PF00301 Rubredoxin EQM13_RS13015 PF00753 Metallo-beta-lactamase superfamily EQM13_RS13015 PF00258 Flavodoxin EQM13_RS13020 PF01965 DJ-1/PfpI family EQM13_RS13040 PF02608 ABC transporter substrate-binding protein PnrA-like EQM13_RS13045 PF02504 Fatty acid synthesis protein EQM13_RS13050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EQM13_RS13065 PF09338 Glycine/sarcosine/betaine reductase component B subunits EQM13_RS13070 PF00085 Thioredoxin EQM13_RS13075 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS13085 PF00588 SpoU rRNA Methylase family EQM13_RS13095 PF00005 ABC transporter EQM13_RS13100 PF01032 FecCD transport family EQM13_RS13105 PF01497 Periplasmic binding protein EQM13_RS13120 PF04294 VanW like protein EQM13_RS13125 PF02491 SHS2 domain inserted in FTSA EQM13_RS13130 PF10576 Iron-sulfur binding domain of endonuclease III EQM13_RS13130 PF00633 Helix-hairpin-helix motif EQM13_RS13130 PF00730 HhH-GPD superfamily base excision DNA repair protein EQM13_RS13140 PF00155 Aminotransferase class I and II EQM13_RS13145 PF08331 Domain of unknown function (DUF1730) EQM13_RS13150 PF01098 Cell cycle protein EQM13_RS13155 PF00005 ABC transporter EQM13_RS13160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS13160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS13165 PF09297 NADH pyrophosphatase zinc ribbon domain EQM13_RS13165 PF00293 NUDIX domain EQM13_RS13185 PF03551 Transcriptional regulator PadR-like family EQM13_RS13195 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS13200 PF00557 Metallopeptidase family M24 EQM13_RS13210 PF01226 Formate/nitrite transporter EQM13_RS13215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EQM13_RS13215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EQM13_RS13220 PF04961 Formiminotransferase-cyclodeaminase EQM13_RS13225 PF01268 Formate--tetrahydrofolate ligase EQM13_RS13230 PF12833 Helix-turn-helix domain EQM13_RS13230 PF02311 AraC-like ligand binding domain EQM13_RS13235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS13235 PF06580 Histidine kinase EQM13_RS13235 PF07694 5TMR of 5TMR-LYT EQM13_RS13240 PF01235 Sodium:alanine symporter family EQM13_RS13245 PF00464 Serine hydroxymethyltransferase EQM13_RS13255 PF01053 Cys/Met metabolism PLP-dependent enzyme EQM13_RS13260 PF00403 Heavy-metal-associated domain EQM13_RS13265 PF01569 PAP2 superfamily EQM13_RS13270 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS13270 PF13361 UvrD-like helicase C-terminal domain EQM13_RS13285 PF13419 Haloacid dehalogenase-like hydrolase EQM13_RS13310 PF02645 Uncharacterised protein, DegV family COG1307 EQM13_RS13320 PF00704 Glycosyl hydrolases family 18 EQM13_RS13325 PF07687 Peptidase dimerisation domain EQM13_RS13325 PF01546 Peptidase family M20/M25/M40 EQM13_RS13335 PF01063 Amino-transferase class IV EQM13_RS13345 PF13396 Phospholipase_D-nuclease N-terminal EQM13_RS13345 PF13091 PLD-like domain EQM13_RS13360 PF00005 ABC transporter EQM13_RS13360 PF00664 ABC transporter transmembrane region EQM13_RS13385 PF13186 Iron-sulfur cluster-binding domain EQM13_RS13385 PF04055 Radical SAM superfamily EQM13_RS13390 PF00005 ABC transporter EQM13_RS13400 PF00005 ABC transporter EQM13_RS13405 PF12399 Branched-chain amino acid ATP-binding cassette transporter EQM13_RS13405 PF00005 ABC transporter EQM13_RS13410 PF11862 Domain of unknown function (DUF3382) EQM13_RS13410 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS13415 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS13420 PF13458 Periplasmic binding protein EQM13_RS13425 PF01380 SIS domain EQM13_RS13425 PF01418 Helix-turn-helix domain, rpiR family EQM13_RS13430 PF03610 PTS system fructose IIA component EQM13_RS13430 PF03830 PTS system sorbose subfamily IIB component EQM13_RS13435 PF01238 Phosphomannose isomerase type I EQM13_RS13440 PF01238 Phosphomannose isomerase type I EQM13_RS13445 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS13450 PF03830 PTS system sorbose subfamily IIB component EQM13_RS13455 PF08664 YcbB domain EQM13_RS13455 PF00072 Response regulator receiver domain EQM13_RS13460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS13460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain EQM13_RS13460 PF00989 PAS fold EQM13_RS13460 PF17203 Single cache domain 3 EQM13_RS13475 PF00301 Rubredoxin EQM13_RS13480 PF01926 50S ribosome-binding GTPase EQM13_RS13485 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS13485 PF05362 Lon protease (S16) C-terminal proteolytic domain EQM13_RS13485 PF02190 ATP-dependent protease La (LON) substrate-binding domain EQM13_RS13490 PF06689 ClpX C4-type zinc finger EQM13_RS13490 PF10431 C-terminal, D2-small domain, of ClpB protein EQM13_RS13490 PF07724 AAA domain (Cdc48 subfamily) EQM13_RS13495 PF00574 Clp protease EQM13_RS13500 PF05698 Bacterial trigger factor protein (TF) C-terminus EQM13_RS13500 PF05697 Bacterial trigger factor protein (TF) EQM13_RS13500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EQM13_RS13515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS13515 PF00005 ABC transporter EQM13_RS13520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS13520 PF00005 ABC transporter EQM13_RS13530 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS13535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS13550 PF02645 Uncharacterised protein, DegV family COG1307 EQM13_RS13555 PF02915 Rubrerythrin EQM13_RS13560 PF01966 HD domain EQM13_RS13575 PF00293 NUDIX domain EQM13_RS13580 PF13302 Acetyltransferase (GNAT) domain EQM13_RS13595 PF01594 AI-2E family transporter EQM13_RS13600 PF05227 CHASE3 domain EQM13_RS13600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS13600 PF00672 HAMP domain EQM13_RS13610 PF03033 Glycosyltransferase family 28 N-terminal domain EQM13_RS13610 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase EQM13_RS13625 PF00005 ABC transporter EQM13_RS13630 PF00293 NUDIX domain EQM13_RS13660 PF13401 AAA domain EQM13_RS13660 PF11426 Tn7 transposition regulator TnsC EQM13_RS13665 PF00665 Integrase core domain EQM13_RS13670 PF08722 TnsA endonuclease N terminal EQM13_RS13670 PF08721 TnsA endonuclease C terminal EQM13_RS13705 PF02796 Helix-turn-helix domain of resolvase EQM13_RS13705 PF00665 Integrase core domain EQM13_RS13715 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS13715 PF13361 UvrD-like helicase C-terminal domain EQM13_RS13720 PF02463 RecF/RecN/SMC N terminal domain EQM13_RS13730 PF02796 Helix-turn-helix domain of resolvase EQM13_RS13730 PF00239 Resolvase, N terminal domain EQM13_RS13760 PF01695 IstB-like ATP binding protein EQM13_RS13795 PF08003 Protein of unknown function (DUF1698) EQM13_RS13815 PF01380 SIS domain EQM13_RS13820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EQM13_RS13820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EQM13_RS13820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EQM13_RS13820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EQM13_RS13825 PF13735 tRNA nucleotidyltransferase domain 2 putative EQM13_RS13825 PF12627 Probable RNA and SrmB- binding site of polymerase A EQM13_RS13825 PF01743 Poly A polymerase head domain EQM13_RS13830 PF00109 Beta-ketoacyl synthase, N-terminal domain EQM13_RS13830 PF02801 Beta-ketoacyl synthase, C-terminal domain EQM13_RS13835 PF00550 Phosphopantetheine attachment site EQM13_RS13845 PF00698 Acyl transferase domain EQM13_RS13850 PF03060 Nitronate monooxygenase EQM13_RS13855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EQM13_RS13855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EQM13_RS13860 PF07977 FabA-like domain EQM13_RS13865 PF01979 Amidohydrolase family EQM13_RS13875 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS13880 PF03609 PTS system sorbose-specific iic component EQM13_RS13885 PF03830 PTS system sorbose subfamily IIB component EQM13_RS13890 PF03610 PTS system fructose IIA component EQM13_RS13890 PF00874 PRD domain EQM13_RS13890 PF00158 Sigma-54 interaction domain EQM13_RS13900 PF00291 Pyridoxal-phosphate dependent enzyme EQM13_RS13910 PF02558 Ketopantoate reductase PanE/ApbA EQM13_RS13910 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain EQM13_RS13915 PF03313 Serine dehydratase alpha chain EQM13_RS13940 PF10609 NUBPL iron-transfer P-loop NTPase EQM13_RS13945 PF00871 Acetokinase family EQM13_RS13950 PF01515 Phosphate acetyl/butaryl transferase EQM13_RS13955 PF00871 Acetokinase family EQM13_RS13965 PF02457 DisA bacterial checkpoint controller nucleotide-binding EQM13_RS13975 PF13367 PrsW family intramembrane metalloprotease EQM13_RS13980 PF13520 Amino acid permease EQM13_RS13985 PF05524 PEP-utilising enzyme, N-terminal EQM13_RS13985 PF02896 PEP-utilising enzyme, TIM barrel domain EQM13_RS13985 PF00391 PEP-utilising enzyme, mobile domain EQM13_RS13990 PF00381 PTS HPr component phosphorylation site EQM13_RS13995 PF17248 Family of unknown function (DUF5317) EQM13_RS14010 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EQM13_RS14015 PF01678 Diaminopimelate epimerase EQM13_RS14020 PF04198 Putative sugar-binding domain EQM13_RS14030 PF03608 PTS system enzyme II sorbitol-specific factor EQM13_RS14035 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EQM13_RS14035 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EQM13_RS14050 PF01116 Fructose-bisphosphate aldolase class-II EQM13_RS14065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EQM13_RS14065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EQM13_RS14070 PF00269 Small, acid-soluble spore proteins, alpha/beta type EQM13_RS14110 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS14115 PF00107 Zinc-binding dehydrogenase EQM13_RS14115 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS14120 PF00701 Dihydrodipicolinate synthetase family EQM13_RS14125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS14125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS14130 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS14140 PF03830 PTS system sorbose subfamily IIB component EQM13_RS14150 PF00874 PRD domain EQM13_RS14150 PF03610 PTS system fructose IIA component EQM13_RS14150 PF00158 Sigma-54 interaction domain EQM13_RS14165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EQM13_RS14170 PF00005 ABC transporter EQM13_RS14170 PF00664 ABC transporter transmembrane region EQM13_RS14175 PF00005 ABC transporter EQM13_RS14175 PF00664 ABC transporter transmembrane region EQM13_RS14205 PF01520 N-acetylmuramoyl-L-alanine amidase EQM13_RS14210 PF07683 Cobalamin synthesis protein cobW C-terminal domain EQM13_RS14210 PF02492 CobW/HypB/UreG, nucleotide-binding domain EQM13_RS14225 PF03358 NADPH-dependent FMN reductase EQM13_RS14230 PF00380 Ribosomal protein S9/S16 EQM13_RS14235 PF00572 Ribosomal protein L13 EQM13_RS14240 PF01416 tRNA pseudouridine synthase EQM13_RS14245 PF02361 Cobalt transport protein EQM13_RS14250 PF00005 ABC transporter EQM13_RS14255 PF00005 ABC transporter EQM13_RS14260 PF01196 Ribosomal protein L17 EQM13_RS14265 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EQM13_RS14265 PF01000 RNA polymerase Rpb3/RpoA insert domain EQM13_RS14265 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EQM13_RS14270 PF01479 S4 domain EQM13_RS14270 PF00163 Ribosomal protein S4/S9 N-terminal domain EQM13_RS14275 PF00411 Ribosomal protein S11 EQM13_RS14280 PF00416 Ribosomal protein S13/S18 EQM13_RS14285 PF00444 Ribosomal protein L36 EQM13_RS14290 PF01176 Translation initiation factor 1A / IF-1 EQM13_RS14300 PF05191 Adenylate kinase, active site lid EQM13_RS14305 PF00344 SecY translocase EQM13_RS14310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EQM13_RS14315 PF00327 Ribosomal protein L30p/L7e EQM13_RS14320 PF00333 Ribosomal protein S5, N-terminal domain EQM13_RS14320 PF03719 Ribosomal protein S5, C-terminal domain EQM13_RS14325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EQM13_RS14330 PF00347 Ribosomal protein L6 EQM13_RS14335 PF00410 Ribosomal protein S8 EQM13_RS14340 PF00253 Ribosomal protein S14p/S29e EQM13_RS14345 PF00281 Ribosomal protein L5 EQM13_RS14345 PF00673 ribosomal L5P family C-terminus EQM13_RS14350 PF00467 KOW motif EQM13_RS14350 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EQM13_RS14355 PF00238 Ribosomal protein L14p/L23e EQM13_RS14360 PF00366 Ribosomal protein S17 EQM13_RS14365 PF00831 Ribosomal L29 protein EQM13_RS14370 PF00252 Ribosomal protein L16p/L10e EQM13_RS14375 PF00189 Ribosomal protein S3, C-terminal domain EQM13_RS14375 PF07650 KH domain EQM13_RS14380 PF00237 Ribosomal protein L22p/L17e EQM13_RS14385 PF00203 Ribosomal protein S19 EQM13_RS14390 PF00181 Ribosomal Proteins L2, RNA binding domain EQM13_RS14390 PF03947 Ribosomal Proteins L2, C-terminal domain EQM13_RS14395 PF00276 Ribosomal protein L23 EQM13_RS14400 PF00573 Ribosomal protein L4/L1 family EQM13_RS14405 PF00297 Ribosomal protein L3 EQM13_RS14410 PF00338 Ribosomal protein S10p/S20e EQM13_RS14415 PF03144 Elongation factor Tu domain 2 EQM13_RS14415 PF00009 Elongation factor Tu GTP binding domain EQM13_RS14415 PF03143 Elongation factor Tu C-terminal domain EQM13_RS14420 PF03144 Elongation factor Tu domain 2 EQM13_RS14420 PF14492 Elongation Factor G, domain II EQM13_RS14420 PF03764 Elongation factor G, domain IV EQM13_RS14420 PF00009 Elongation factor Tu GTP binding domain EQM13_RS14420 PF00679 Elongation factor G C-terminus EQM13_RS14425 PF00177 Ribosomal protein S7p/S5e EQM13_RS14430 PF00164 Ribosomal protein S12/S23 EQM13_RS14435 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EQM13_RS14440 PF05000 RNA polymerase Rpb1, domain 4 EQM13_RS14440 PF04997 RNA polymerase Rpb1, domain 1 EQM13_RS14440 PF04983 RNA polymerase Rpb1, domain 3 EQM13_RS14440 PF04998 RNA polymerase Rpb1, domain 5 EQM13_RS14440 PF00623 RNA polymerase Rpb1, domain 2 EQM13_RS14445 PF04565 RNA polymerase Rpb2, domain 3 EQM13_RS14445 PF04561 RNA polymerase Rpb2, domain 2 EQM13_RS14445 PF04563 RNA polymerase beta subunit EQM13_RS14445 PF00562 RNA polymerase Rpb2, domain 6 EQM13_RS14445 PF04560 RNA polymerase Rpb2, domain 7 EQM13_RS14445 PF10385 RNA polymerase beta subunit external 1 domain EQM13_RS14450 PF16320 Ribosomal protein L7/L12 dimerisation domain EQM13_RS14450 PF00542 Ribosomal protein L7/L12 C-terminal domain EQM13_RS14455 PF00466 Ribosomal protein L10 EQM13_RS14460 PF00687 Ribosomal protein L1p/L10e family EQM13_RS14465 PF03946 Ribosomal protein L11, N-terminal domain EQM13_RS14465 PF00298 Ribosomal protein L11, RNA binding domain EQM13_RS14470 PF02357 Transcription termination factor nusG EQM13_RS14470 PF00467 KOW motif EQM13_RS14475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EQM13_RS14480 PF00471 Ribosomal protein L33 EQM13_RS14485 PF03144 Elongation factor Tu domain 2 EQM13_RS14485 PF03143 Elongation factor Tu C-terminal domain EQM13_RS14485 PF00009 Elongation factor Tu GTP binding domain EQM13_RS14495 PF08281 Sigma-70, region 4 EQM13_RS14495 PF04542 Sigma-70 region 2 EQM13_RS14500 PF05991 YacP-like NYN domain EQM13_RS14505 PF08032 RNA 2'-O ribose methyltransferase substrate binding EQM13_RS14505 PF00588 SpoU rRNA Methylase family EQM13_RS14510 PF02511 Thymidylate synthase complementing protein EQM13_RS14515 PF00636 Ribonuclease III domain EQM13_RS14520 PF09190 DALR domain EQM13_RS14520 PF01406 tRNA synthetases class I (C) catalytic domain EQM13_RS14525 PF00749 tRNA synthetases class I (E and Q), catalytic domain EQM13_RS14535 PF03129 Anticodon binding domain EQM13_RS14535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EQM13_RS14535 PF04073 Aminoacyl-tRNA editing domain EQM13_RS14540 PF02542 YgbB family EQM13_RS14545 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EQM13_RS14555 PF02559 CarD-like/TRCF domain EQM13_RS14565 PF10635 DisA bacterial checkpoint controller linker region EQM13_RS14565 PF02457 DisA bacterial checkpoint controller nucleotide-binding EQM13_RS14570 PF18073 Rubredoxin metal binding domain EQM13_RS14575 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS14575 PF07724 AAA domain (Cdc48 subfamily) EQM13_RS14575 PF17871 AAA lid domain EQM13_RS14575 PF10431 C-terminal, D2-small domain, of ClpB protein EQM13_RS14575 PF02861 Clp amino terminal domain, pathogenicity island component EQM13_RS14580 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain EQM13_RS14585 PF02151 UvrB/uvrC motif EQM13_RS14590 PF17727 CtsR C-terminal dimerization domain EQM13_RS14590 PF05848 CtsR N-terminal HTH domain EQM13_RS14595 PF03764 Elongation factor G, domain IV EQM13_RS14595 PF14492 Elongation Factor G, domain II EQM13_RS14595 PF00679 Elongation factor G C-terminus EQM13_RS14595 PF00009 Elongation factor Tu GTP binding domain EQM13_RS14595 PF03144 Elongation factor Tu domain 2 EQM13_RS14600 PF00155 Aminotransferase class I and II EQM13_RS14605 PF00005 ABC transporter EQM13_RS14610 PF00005 ABC transporter EQM13_RS14610 PF12399 Branched-chain amino acid ATP-binding cassette transporter EQM13_RS14615 PF11862 Domain of unknown function (DUF3382) EQM13_RS14615 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS14620 PF02653 Branched-chain amino acid transport system / permease component EQM13_RS14625 PF13458 Periplasmic binding protein EQM13_RS14630 PF03816 Cell envelope-related transcriptional attenuator domain EQM13_RS14645 PF08264 Anticodon-binding domain of tRNA EQM13_RS14645 PF00133 tRNA synthetases class I (I, L, M and V) EQM13_RS14650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EQM13_RS14650 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS14655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EQM13_RS14655 PF00364 Biotin-requiring enzyme EQM13_RS14655 PF02817 e3 binding domain EQM13_RS14660 PF00364 Biotin-requiring enzyme EQM13_RS14660 PF02779 Transketolase, pyrimidine binding domain EQM13_RS14660 PF02780 Transketolase, C-terminal domain EQM13_RS14665 PF00676 Dehydrogenase E1 component EQM13_RS14680 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EQM13_RS14680 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EQM13_RS14685 PF03608 PTS system enzyme II sorbitol-specific factor EQM13_RS14690 PF06923 Glucitol operon activator protein (GutM) EQM13_RS14695 PF04198 Putative sugar-binding domain EQM13_RS14715 PF13411 MerR HTH family regulatory protein EQM13_RS14715 PF06445 GyrI-like small molecule binding domain EQM13_RS14725 PF00317 Ribonucleotide reductase, all-alpha domain EQM13_RS14725 PF02867 Ribonucleotide reductase, barrel domain EQM13_RS14725 PF03477 ATP cone domain EQM13_RS14755 PF03167 Uracil DNA glycosylase superfamily EQM13_RS14760 PF03167 Uracil DNA glycosylase superfamily EQM13_RS14765 PF00152 tRNA synthetases class II (D, K and N) EQM13_RS14765 PF01336 OB-fold nucleic acid binding domain EQM13_RS14770 PF01272 Transcription elongation factor, GreA/GreB, C-term EQM13_RS14770 PF03449 Transcription elongation factor, N-terminal EQM13_RS14780 PF01207 Dihydrouridine synthase (Dus) EQM13_RS14785 PF03309 Type III pantothenate kinase EQM13_RS14795 PF03576 Peptidase family S58 EQM13_RS14800 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EQM13_RS14805 PF00364 Biotin-requiring enzyme EQM13_RS14815 PF01039 Carboxyl transferase domain EQM13_RS14830 PF01642 Methylmalonyl-CoA mutase EQM13_RS14830 PF02310 B12 binding domain EQM13_RS14835 PF01642 Methylmalonyl-CoA mutase EQM13_RS14835 PF02310 B12 binding domain EQM13_RS14840 PF01434 Peptidase family M41 EQM13_RS14840 PF17862 AAA+ lid domain EQM13_RS14840 PF00004 ATPase family associated with various cellular activities (AAA) EQM13_RS14845 PF11734 TilS substrate C-terminal domain EQM13_RS14845 PF00156 Phosphoribosyl transferase domain EQM13_RS14845 PF01171 PP-loop family EQM13_RS14850 PF01171 PP-loop family EQM13_RS14850 PF11734 TilS substrate C-terminal domain EQM13_RS14855 PF00069 Protein kinase domain EQM13_RS14855 PF03793 PASTA domain EQM13_RS14880 PF00989 PAS fold EQM13_RS14880 PF18698 Histidine kinase sensor domain EQM13_RS14880 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS14880 PF00672 HAMP domain EQM13_RS14885 PF00072 Response regulator receiver domain EQM13_RS14885 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS14890 PF07228 Stage II sporulation protein E (SpoIIE) EQM13_RS14895 PF00575 S1 RNA binding domain EQM13_RS14910 PF07873 YabP family EQM13_RS14915 PF01479 S4 domain EQM13_RS14920 PF00216 Bacterial DNA-binding protein EQM13_RS14925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS14925 PF03819 MazG nucleotide pyrophosphohydrolase domain EQM13_RS14930 PF01943 Polysaccharide biosynthesis protein EQM13_RS14930 PF14667 Polysaccharide biosynthesis C-terminal domain EQM13_RS14935 PF15714 Stage V sporulation protein T C-terminal, transcription factor EQM13_RS14935 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin EQM13_RS14945 PF03461 TRCF domain EQM13_RS14945 PF17757 UvrB interaction domain EQM13_RS14945 PF00270 DEAD/DEAH box helicase EQM13_RS14945 PF02559 CarD-like/TRCF domain EQM13_RS14945 PF00271 Helicase conserved C-terminal domain EQM13_RS14950 PF01195 Peptidyl-tRNA hydrolase EQM13_RS14955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EQM13_RS14955 PF14572 Phosphoribosyl synthetase-associated domain EQM13_RS14960 PF00483 Nucleotidyl transferase EQM13_RS14960 PF14602 Hexapeptide repeat of succinyl-transferase EQM13_RS14960 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS14965 PF04026 SpoVG EQM13_RS14970 PF09182 Bacterial purine repressor, N-terminal EQM13_RS14970 PF00156 Phosphoribosyl transferase domain EQM13_RS14975 PF01225 Mur ligase family, catalytic domain EQM13_RS14975 PF02875 Mur ligase family, glutamate ligase domain EQM13_RS14975 PF08245 Mur ligase middle domain EQM13_RS14980 PF03816 Cell envelope-related transcriptional attenuator domain EQM13_RS14985 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EQM13_RS14985 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EQM13_RS14990 PF00378 Enoyl-CoA hydratase/isomerase EQM13_RS15000 PF00342 Phosphoglucose isomerase EQM13_RS15020 PF17202 Single cache domain 3 EQM13_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EQM13_RS15020 PF00672 HAMP domain EQM13_RS15025 PF01923 Cobalamin adenosyltransferase EQM13_RS15030 PF01170 Putative RNA methylase family UPF0020 EQM13_RS15030 PF02926 THUMP domain EQM13_RS15035 PF01880 Desulfoferrodoxin EQM13_RS15040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EQM13_RS15040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EQM13_RS15045 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EQM13_RS15045 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EQM13_RS15050 PF01479 S4 domain EQM13_RS15050 PF00579 tRNA synthetases class I (W and Y) EQM13_RS15055 PF00188 Cysteine-rich secretory protein family EQM13_RS15060 PF00293 NUDIX domain EQM13_RS15065 PF00578 AhpC/TSA family EQM13_RS15080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EQM13_RS15080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EQM13_RS15085 PF00155 Aminotransferase class I and II EQM13_RS15090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EQM13_RS15095 PF01734 Patatin-like phospholipase EQM13_RS15100 PF09587 Bacterial capsule synthesis protein PGA_cap EQM13_RS15105 PF01244 Membrane dipeptidase (Peptidase family M19) EQM13_RS15120 PF00075 RNase H EQM13_RS15130 PF00106 short chain dehydrogenase EQM13_RS15135 PF01081 KDPG and KHG aldolase EQM13_RS15140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS15140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EQM13_RS15150 PF01979 Amidohydrolase family EQM13_RS15160 PF07702 UTRA domain EQM13_RS15160 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS15165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EQM13_RS15165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EQM13_RS15170 PF13580 SIS domain EQM13_RS15175 PF03830 PTS system sorbose subfamily IIB component EQM13_RS15175 PF03610 PTS system fructose IIA component EQM13_RS15180 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS15190 PF03830 PTS system sorbose subfamily IIB component EQM13_RS15190 PF03610 PTS system fructose IIA component EQM13_RS15195 PF00874 PRD domain EQM13_RS15195 PF00158 Sigma-54 interaction domain EQM13_RS15195 PF03610 PTS system fructose IIA component EQM13_RS15200 PF07702 UTRA domain EQM13_RS15200 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS15215 PF01380 SIS domain EQM13_RS15220 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS15225 PF03609 PTS system sorbose-specific iic component EQM13_RS15230 PF03830 PTS system sorbose subfamily IIB component EQM13_RS15235 PF01791 DeoC/LacD family aldolase EQM13_RS15240 PF00834 Ribulose-phosphate 3 epimerase family EQM13_RS15245 PF01380 SIS domain EQM13_RS15255 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EQM13_RS15260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS15260 PF02378 Phosphotransferase system, EIIC EQM13_RS15260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS15270 PF00455 DeoR C terminal sensor domain EQM13_RS15270 PF08220 DeoR-like helix-turn-helix domain EQM13_RS15275 PF04055 Radical SAM superfamily EQM13_RS15280 PF01228 Glycine radical EQM13_RS15280 PF02901 Pyruvate formate lyase-like EQM13_RS15305 PF02796 Helix-turn-helix domain of resolvase EQM13_RS15305 PF00239 Resolvase, N terminal domain EQM13_RS15320 PF01555 DNA methylase EQM13_RS15320 PF18273 Type III R-M EcoP15I C-terminal domain EQM13_RS15340 PF03190 Protein of unknown function, DUF255 EQM13_RS15345 PF03190 Protein of unknown function, DUF255 EQM13_RS15365 PF00005 ABC transporter EQM13_RS15370 PF00072 Response regulator receiver domain EQM13_RS15370 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS15375 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS15375 PF00989 PAS fold EQM13_RS15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS15375 PF00672 HAMP domain EQM13_RS15375 PF18698 Histidine kinase sensor domain EQM13_RS15380 PF07685 CobB/CobQ-like glutamine amidotransferase domain EQM13_RS15390 PF02417 Chromate transporter EQM13_RS15395 PF01501 Glycosyl transferase family 8 EQM13_RS15395 PF08437 Glycosyl transferase family 8 C-terminal EQM13_RS15410 PF02645 Uncharacterised protein, DegV family COG1307 EQM13_RS15420 PF01261 Xylose isomerase-like TIM barrel EQM13_RS15425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EQM13_RS15425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EQM13_RS15430 PF03551 Transcriptional regulator PadR-like family EQM13_RS15430 PF13847 Methyltransferase domain EQM13_RS15445 PF02525 Flavodoxin-like fold EQM13_RS15475 PF00005 ABC transporter EQM13_RS15475 PF00664 ABC transporter transmembrane region EQM13_RS15480 PF00664 ABC transporter transmembrane region EQM13_RS15480 PF00005 ABC transporter EQM13_RS15500 PF11700 Vacuole effluxer Atg22 like EQM13_RS15505 PF00665 Integrase core domain EQM13_RS15510 PF01695 IstB-like ATP binding protein EQM13_RS15520 PF00665 Integrase core domain EQM13_RS15520 PF02796 Helix-turn-helix domain of resolvase EQM13_RS15535 PF00005 ABC transporter EQM13_RS15535 PF00664 ABC transporter transmembrane region EQM13_RS15540 PF00664 ABC transporter transmembrane region EQM13_RS15540 PF00005 ABC transporter EQM13_RS15545 PF09334 tRNA synthetases class I (M) EQM13_RS15560 PF00005 ABC transporter EQM13_RS15565 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS15570 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS15575 PF00497 Bacterial extracellular solute-binding proteins, family 3 EQM13_RS15595 PF00005 ABC transporter EQM13_RS15595 PF00664 ABC transporter transmembrane region EQM13_RS15620 PF01208 Uroporphyrinogen decarboxylase (URO-D) EQM13_RS15625 PF02310 B12 binding domain EQM13_RS15625 PF02607 B12 binding domain EQM13_RS15630 PF12704 MacB-like periplasmic core domain EQM13_RS15630 PF02687 FtsX-like permease family EQM13_RS15635 PF00005 ABC transporter EQM13_RS15640 PF18698 Histidine kinase sensor domain EQM13_RS15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS15640 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS15640 PF00672 HAMP domain EQM13_RS15640 PF00989 PAS fold EQM13_RS15645 PF00072 Response regulator receiver domain EQM13_RS15645 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS15655 PF01209 ubiE/COQ5 methyltransferase family EQM13_RS15675 PF14748 Pyrroline-5-carboxylate reductase dimerisation EQM13_RS15675 PF03807 NADP oxidoreductase coenzyme F420-dependent EQM13_RS15680 PF01321 Creatinase/Prolidase N-terminal domain EQM13_RS15680 PF00557 Metallopeptidase family M24 EQM13_RS15690 PF04542 Sigma-70 region 2 EQM13_RS15690 PF08281 Sigma-70, region 4 EQM13_RS15695 PF01037 Lrp/AsnC ligand binding domain EQM13_RS15710 PF00005 ABC transporter EQM13_RS15720 PF05175 Methyltransferase small domain EQM13_RS15720 PF08468 Methyltransferase small domain N-terminal EQM13_RS15740 PF00440 Bacterial regulatory proteins, tetR family EQM13_RS15795 PF03932 CutC family EQM13_RS15805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQM13_RS15805 PF02378 Phosphotransferase system, EIIC EQM13_RS15805 PF00367 phosphotransferase system, EIIB EQM13_RS15815 PF01695 IstB-like ATP binding protein EQM13_RS15820 PF02378 Phosphotransferase system, EIIC EQM13_RS15820 PF00367 phosphotransferase system, EIIB EQM13_RS15825 PF00874 PRD domain EQM13_RS15825 PF03123 CAT RNA binding domain EQM13_RS15830 PF00367 phosphotransferase system, EIIB EQM13_RS15830 PF02378 Phosphotransferase system, EIIC EQM13_RS15830 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EQM13_RS15840 PF00005 ABC transporter EQM13_RS15850 PF00583 Acetyltransferase (GNAT) family EQM13_RS15860 PF12697 Alpha/beta hydrolase family EQM13_RS15885 PF00132 Bacterial transferase hexapeptide (six repeats) EQM13_RS15895 PF07690 Major Facilitator Superfamily EQM13_RS15900 PF01381 Helix-turn-helix EQM13_RS15955 PF01479 S4 domain EQM13_RS15955 PF00579 tRNA synthetases class I (W and Y) EQM13_RS15960 PF01381 Helix-turn-helix EQM13_RS15965 PF00005 ABC transporter EQM13_RS15965 PF13732 Domain of unknown function (DUF4162) EQM13_RS15980 PF00005 ABC transporter EQM13_RS16000 PF00239 Resolvase, N terminal domain EQM13_RS16000 PF02796 Helix-turn-helix domain of resolvase EQM13_RS16040 PF10026 Predicted Zn-dependent protease (DUF2268) EQM13_RS16045 PF13411 MerR HTH family regulatory protein EQM13_RS16045 PF07739 TipAS antibiotic-recognition domain EQM13_RS16055 PF08299 Bacterial dnaA protein helix-turn-helix EQM13_RS16055 PF00308 Bacterial dnaA protein EQM13_RS16060 PF00665 Integrase core domain EQM13_RS16080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EQM13_RS16080 PF18766 SWI2/SNF2 ATPase EQM13_RS16080 PF11867 Domain of unknown function (DUF3387) EQM13_RS16090 PF01420 Type I restriction modification DNA specificity domain EQM13_RS16095 PF02384 N-6 DNA Methylase EQM13_RS16105 PF00145 C-5 cytosine-specific DNA methylase EQM13_RS16110 PF09564 NgoBV restriction endonuclease EQM13_RS16155 PF01367 5'-3' exonuclease, C-terminal SAM fold EQM13_RS16155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EQM13_RS16155 PF00476 DNA polymerase family A EQM13_RS16155 PF01612 3'-5' exonuclease EQM13_RS16210 PF02773 S-adenosylmethionine synthetase, C-terminal domain EQM13_RS16210 PF02772 S-adenosylmethionine synthetase, central domain EQM13_RS16210 PF00438 S-adenosylmethionine synthetase, N-terminal domain EQM13_RS16215 PF01555 DNA methylase EQM13_RS16220 PF00145 C-5 cytosine-specific DNA methylase EQM13_RS16255 PF03354 Phage Terminase EQM13_RS16265 PF04860 Phage portal protein EQM13_RS16270 PF00574 Clp protease EQM13_RS16340 PF05105 Bacteriophage holin family EQM13_RS16355 PF07508 Recombinase EQM13_RS16355 PF00239 Resolvase, N terminal domain EQM13_RS16360 PF02796 Helix-turn-helix domain of resolvase EQM13_RS16360 PF00239 Resolvase, N terminal domain EQM13_RS16370 PF00665 Integrase core domain EQM13_RS16370 PF13333 Integrase core domain EQM13_RS16375 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EQM13_RS16405 PF02384 N-6 DNA Methylase EQM13_RS16415 PF01938 TRAM domain EQM13_RS16415 PF05958 tRNA (Uracil-5-)-methyltransferase EQM13_RS16425 PF02824 TGS domain EQM13_RS16425 PF04607 Region found in RelA / SpoT proteins EQM13_RS16425 PF13291 ACT domain EQM13_RS16435 PF10117 McrBC 5-methylcytosine restriction system component EQM13_RS16440 PF12102 Domain of unknown function (DUF3578) EQM13_RS16440 PF07728 AAA domain (dynein-related subfamily) EQM13_RS16445 PF02086 D12 class N6 adenine-specific DNA methyltransferase EQM13_RS16455 PF04851 Type III restriction enzyme, res subunit EQM13_RS16455 PF13307 Helicase C-terminal domain EQM13_RS16460 PF02073 Thermophilic metalloprotease (M29) EQM13_RS16465 PF04055 Radical SAM superfamily EQM13_RS16465 PF02310 B12 binding domain EQM13_RS16475 PF13580 SIS domain EQM13_RS16490 PF03613 PTS system mannose/fructose/sorbose family IID component EQM13_RS16495 PF03609 PTS system sorbose-specific iic component EQM13_RS16500 PF03610 PTS system fructose IIA component EQM13_RS16500 PF03830 PTS system sorbose subfamily IIB component EQM13_RS16515 PF00158 Sigma-54 interaction domain EQM13_RS16515 PF03610 PTS system fructose IIA component EQM13_RS16515 PF00874 PRD domain EQM13_RS16520 PF07155 ECF-type riboflavin transporter, S component EQM13_RS16525 PF00563 EAL domain EQM13_RS16525 PF00498 FHA domain EQM13_RS16525 PF00990 Diguanylate cyclase, GGDEF domain EQM13_RS16530 PF05857 TraX protein EQM13_RS16545 PF00266 Aminotransferase class-V EQM13_RS16550 PF13686 DsrE/DsrF/DrsH-like family EQM13_RS16555 PF00291 Pyridoxal-phosphate dependent enzyme EQM13_RS16560 PF00005 ABC transporter EQM13_RS16560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS16565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS16565 PF00005 ABC transporter EQM13_RS16570 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS16585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS16605 PF00005 ABC transporter EQM13_RS16610 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS16615 PF02632 BioY family EQM13_RS16620 PF00478 IMP dehydrogenase / GMP reductase domain EQM13_RS16620 PF00571 CBS domain EQM13_RS16630 PF03099 Biotin/lipoate A/B protein ligase family EQM13_RS16630 PF02237 Biotin protein ligase C terminal domain EQM13_RS16630 PF08279 HTH domain EQM13_RS16640 PF00395 S-layer homology domain EQM13_RS16640 PF03424 Carbohydrate binding domain (family 17/28) EQM13_RS16640 PF00150 Cellulase (glycosyl hydrolase family 5) EQM13_RS16660 PF00005 ABC transporter EQM13_RS16670 PF00395 S-layer homology domain EQM13_RS16670 PF00963 Cohesin domain EQM13_RS16695 PF07726 ATPase family associated with various cellular activities (AAA) EQM13_RS16695 PF17863 AAA lid domain EQM13_RS16715 PF04055 Radical SAM superfamily EQM13_RS16720 PF13597 Anaerobic ribonucleoside-triphosphate reductase EQM13_RS16720 PF03477 ATP cone domain EQM13_RS16760 PF10396 GTP-binding protein TrmE N-terminus EQM13_RS16760 PF12631 MnmE helical domain EQM13_RS16760 PF01926 50S ribosome-binding GTPase EQM13_RS16765 PF00574 Clp protease EQM13_RS16770 PF07729 FCD domain EQM13_RS16770 PF00392 Bacterial regulatory proteins, gntR family EQM13_RS16780 PF13520 Amino acid permease EQM13_RS16795 PF00005 ABC transporter EQM13_RS16795 PF09383 NIL domain EQM13_RS16805 PF00005 ABC transporter EQM13_RS16830 PF00005 ABC transporter EQM13_RS16835 PF00664 ABC transporter transmembrane region EQM13_RS16835 PF00005 ABC transporter EQM13_RS16845 PF00664 ABC transporter transmembrane region EQM13_RS16845 PF00005 ABC transporter EQM13_RS16855 PF00005 ABC transporter EQM13_RS16860 PF00005 ABC transporter EQM13_RS16875 PF01938 TRAM domain EQM13_RS16875 PF00919 Uncharacterized protein family UPF0004 EQM13_RS16875 PF04055 Radical SAM superfamily EQM13_RS16895 PF01070 FMN-dependent dehydrogenase EQM13_RS16900 PF02245 Methylpurine-DNA glycosylase (MPG) EQM13_RS16915 PF01965 DJ-1/PfpI family EQM13_RS16920 PF01189 16S rRNA methyltransferase RsmB/F EQM13_RS16920 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EQM13_RS16920 PF17126 RsmF rRNA methyltransferase first C-terminal domain EQM13_RS16930 PF00171 Aldehyde dehydrogenase family EQM13_RS16950 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EQM13_RS16950 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EQM13_RS16955 PF01548 Transposase EQM13_RS16955 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS16960 PF03608 PTS system enzyme II sorbitol-specific factor EQM13_RS16975 PF00106 short chain dehydrogenase EQM13_RS16985 PF00005 ABC transporter EQM13_RS16995 PF01869 BadF/BadG/BcrA/BcrD ATPase family EQM13_RS17000 PF01476 LysM domain EQM13_RS17000 PF05257 CHAP domain EQM13_RS17015 PF04055 Radical SAM superfamily EQM13_RS17015 PF16199 Radical_SAM C-terminal domain EQM13_RS17025 PF00107 Zinc-binding dehydrogenase EQM13_RS17025 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS17030 PF00465 Iron-containing alcohol dehydrogenase EQM13_RS17045 PF03773 Predicted permease EQM13_RS17050 PF02492 CobW/HypB/UreG, nucleotide-binding domain EQM13_RS17050 PF07683 Cobalamin synthesis protein cobW C-terminal domain EQM13_RS17060 PF00950 ABC 3 transport family EQM13_RS17065 PF00005 ABC transporter EQM13_RS17070 PF01297 Zinc-uptake complex component A periplasmic EQM13_RS17075 PF00005 ABC transporter EQM13_RS17090 PF00271 Helicase conserved C-terminal domain EQM13_RS17090 PF00270 DEAD/DEAH box helicase EQM13_RS17095 PF04748 Divergent polysaccharide deacetylase EQM13_RS17125 PF04542 Sigma-70 region 2 EQM13_RS17125 PF08281 Sigma-70, region 4 EQM13_RS17135 PF00665 Integrase core domain EQM13_RS17135 PF02796 Helix-turn-helix domain of resolvase EQM13_RS17145 PF04073 Aminoacyl-tRNA editing domain EQM13_RS17150 PF01131 DNA topoisomerase EQM13_RS17150 PF01751 Toprim domain EQM13_RS17165 PF06782 Uncharacterised protein family (UPF0236) EQM13_RS17205 PF00150 Cellulase (glycosyl hydrolase family 5) EQM13_RS17205 PF03424 Carbohydrate binding domain (family 17/28) EQM13_RS17205 PF00395 S-layer homology domain EQM13_RS17235 PF04542 Sigma-70 region 2 EQM13_RS17235 PF08281 Sigma-70, region 4 EQM13_RS17245 PF01569 PAP2 superfamily EQM13_RS17250 PF09335 SNARE associated Golgi protein EQM13_RS17255 PF00072 Response regulator receiver domain EQM13_RS17255 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS17270 PF03814 Potassium-transporting ATPase A subunit EQM13_RS17270 PF03814 Potassium-transporting ATPase A subunit EQM13_RS17300 PF07690 Major Facilitator Superfamily EQM13_RS17320 PF00005 ABC transporter EQM13_RS17325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS17325 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS17325 PF00989 PAS fold EQM13_RS17325 PF16736 Single Cache-like EQM13_RS17330 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS17330 PF00072 Response regulator receiver domain EQM13_RS17350 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS17350 PF00672 HAMP domain EQM13_RS17350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS17355 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS17355 PF00072 Response regulator receiver domain EQM13_RS17360 PF00580 UvrD/REP helicase N-terminal domain EQM13_RS17360 PF13361 UvrD-like helicase C-terminal domain EQM13_RS17385 PF02590 Predicted SPOUT methyltransferase EQM13_RS17425 PF07992 Pyridine nucleotide-disulphide oxidoreductase EQM13_RS17425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EQM13_RS17430 PF00958 GMP synthase C terminal domain EQM13_RS17430 PF00117 Glutamine amidotransferase class-I EQM13_RS17430 PF03352 Methyladenine glycosylase EQM13_RS17430 PF13302 Acetyltransferase (GNAT) domain EQM13_RS17430 PF13673 Acetyltransferase (GNAT) domain EQM13_RS17440 PF03063 Prismane/CO dehydrogenase family EQM13_RS17460 PF00881 Nitroreductase family EQM13_RS17470 PF12848 ABC transporter EQM13_RS17470 PF00005 ABC transporter EQM13_RS17475 PF13677 Membrane MotB of proton-channel complex MotA/MotB EQM13_RS17475 PF00691 OmpA family EQM13_RS17480 PF01618 MotA/TolQ/ExbB proton channel family EQM13_RS17485 PF12848 ABC transporter EQM13_RS17485 PF00005 ABC transporter EQM13_RS17490 PF03576 Peptidase family S58 EQM13_RS17495 PF00107 Zinc-binding dehydrogenase EQM13_RS17495 PF08240 Alcohol dehydrogenase GroES-like domain EQM13_RS17500 PF00294 pfkB family carbohydrate kinase EQM13_RS17505 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS17510 PF05043 Mga helix-turn-helix domain EQM13_RS17510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS17510 PF00874 PRD domain EQM13_RS17510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS17510 PF08279 HTH domain EQM13_RS17515 PF02378 Phosphotransferase system, EIIC EQM13_RS17515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS17520 PF01548 Transposase EQM13_RS17520 PF02371 Transposase IS116/IS110/IS902 family EQM13_RS17530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EQM13_RS17535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EQM13_RS17540 PF03611 PTS system sugar-specific permease component EQM13_RS17545 PF13580 SIS domain EQM13_RS17550 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EQM13_RS17555 PF16124 RecQ zinc-binding EQM13_RS17555 PF00570 HRDC domain EQM13_RS17555 PF00271 Helicase conserved C-terminal domain EQM13_RS17555 PF00270 DEAD/DEAH box helicase EQM13_RS17555 PF09382 RQC domain EQM13_RS17570 PF00293 NUDIX domain EQM13_RS17570 PF03099 Biotin/lipoate A/B protein ligase family EQM13_RS17585 PF00072 Response regulator receiver domain EQM13_RS17585 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS17590 PF18719 ArlS sensor domain EQM13_RS17590 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS17590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS17595 PF01895 PhoU domain EQM13_RS17600 PF00005 ABC transporter EQM13_RS17605 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS17610 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS17615 PF12849 PBP superfamily domain EQM13_RS17620 PF00005 ABC transporter EQM13_RS17620 PF03459 TOBE domain EQM13_RS17620 PF17912 MalK OB fold domain EQM13_RS17625 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS17630 PF12679 ABC-2 family transporter protein EQM13_RS17635 PF00005 ABC transporter EQM13_RS17645 PF03006 Haemolysin-III related EQM13_RS17655 PF03372 Endonuclease/Exonuclease/phosphatase family EQM13_RS17660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EQM13_RS17670 PF01171 PP-loop family EQM13_RS17675 PF14489 QueF-like protein EQM13_RS17685 PF08032 RNA 2'-O ribose methyltransferase substrate binding EQM13_RS17685 PF00588 SpoU rRNA Methylase family EQM13_RS17690 PF00753 Metallo-beta-lactamase superfamily EQM13_RS17705 PF01979 Amidohydrolase family EQM13_RS17720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EQM13_RS17725 PF07969 Amidohydrolase family EQM13_RS17730 PF01177 Asp/Glu/Hydantoin racemase EQM13_RS17735 PF01321 Creatinase/Prolidase N-terminal domain EQM13_RS17735 PF00557 Metallopeptidase family M24 EQM13_RS17740 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS17740 PF12911 N-terminal TM domain of oligopeptide transport permease C EQM13_RS17745 PF00528 Binding-protein-dependent transport system inner membrane component EQM13_RS17750 PF00005 ABC transporter EQM13_RS17750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS17755 PF00005 ABC transporter EQM13_RS17755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EQM13_RS17760 PF02954 Bacterial regulatory protein, Fis family EQM13_RS17760 PF13426 PAS domain EQM13_RS17760 PF00158 Sigma-54 interaction domain EQM13_RS17780 PF02590 Predicted SPOUT methyltransferase EQM13_RS17785 PF01975 Survival protein SurE EQM13_RS17795 PF13180 PDZ domain EQM13_RS17800 PF00753 Metallo-beta-lactamase superfamily EQM13_RS17805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EQM13_RS17825 PF13426 PAS domain EQM13_RS17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EQM13_RS17825 PF00672 HAMP domain EQM13_RS17825 PF00512 His Kinase A (phospho-acceptor) domain EQM13_RS17830 PF00486 Transcriptional regulatory protein, C terminal EQM13_RS17830 PF00072 Response regulator receiver domain EQM13_RS17840 PF00690 Cation transporter/ATPase, N-terminus EQM13_RS17840 PF00689 Cation transporting ATPase, C-terminus EQM13_RS17845 PF00082 Subtilase family EQM13_RS17850 PF01476 LysM domain EQM13_RS17850 PF08525 Opacity-associated protein A N-terminal motif EQM13_RS17850 PF01551 Peptidase family M23 EQM13_RS17870 PF06866 Protein of unknown function (DUF1256) EQM13_RS17880 PF00781 Diacylglycerol kinase catalytic domain EQM13_RS17890 PF00266 Aminotransferase class-V EQM13_RS17895 PF01979 Amidohydrolase family EQM13_RS17895 PF13382 Adenine deaminase C-terminal domain EQM13_RS17920 PF01609 Transposase DDE domain EQM13_RS17925 PF13276 HTH-like domain EQM13_RS17925 PF00665 Integrase core domain EQM13_RS17925 PF13333 Integrase core domain EQM13_RS17930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EQM13_RS17930 PF01348 Type II intron maturase EQM13_RS17950 PF01695 IstB-like ATP binding protein EQM13_RS17975 PF00005 ABC transporter EQM13_RS17990 PF00005 ABC transporter EQM13_RS17990 PF13732 Domain of unknown function (DUF4162) EQM13_RS17995 PF02906 Iron only hydrogenase large subunit, C-terminal domain EQM13_RS17995 PF00037 4Fe-4S binding domain EQM13_RS17995 PF02256 Iron hydrogenase small subunit EQM13_RS17995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EQM13_RS18000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EQM13_RS18000 PF00037 4Fe-4S binding domain EQM13_RS18000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EQM13_RS18015 PF02567 Phenazine biosynthesis-like protein EQM13_RS18020 PF17762 HTH domain found in ParB protein EQM13_RS18020 PF02195 ParB-like nuclease domain EQM13_RS18025 PF13614 AAA domain EQM13_RS18030 PF17762 HTH domain found in ParB protein EQM13_RS18030 PF02195 ParB-like nuclease domain EQM13_RS18035 PF02527 rRNA small subunit methyltransferase G EQM13_RS18040 PF01134 Glucose inhibited division protein A EQM13_RS18040 PF13932 GidA associated domain EQM13_RS18045 PF12631 MnmE helical domain EQM13_RS18045 PF01926 50S ribosome-binding GTPase EQM13_RS18045 PF10396 GTP-binding protein TrmE N-terminus EQM13_RS18050 PF01424 R3H domain EQM13_RS18050 PF14804 Jag N-terminus EQM13_RS18055 PF14849 YidC periplasmic domain EQM13_RS18055 PF02096 60Kd inner membrane protein EQM13_RS18060 PF01809 Putative membrane protein insertion efficiency factor EQM13_RS18065 PF00825 Ribonuclease P EQM13_RS18070 PF00468 Ribosomal protein L34 EQM13_RS18330 PF00005 ABC transporter EQM13_RS18330 PF00664 ABC transporter transmembrane region