TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 SMART SM00342 188 270 2.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 PANTHER PTHR11019 29 270 2.7E-28 T 22-04-2016 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 Gene3D G3DSA:1.10.10.60 169 226 4.9E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 SUPERFAMILY SSF46689 225 270 8.96E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 SUPERFAMILY SSF46689 171 221 1.43E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 Pfam PF12833 Helix-turn-helix domain 194 270 6.9E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 PANTHER PTHR11019:SF61 29 270 2.7E-28 T 22-04-2016 TMO_RS02000 faffca9e67023b53b1907df0d7c5dce3 270 Gene3D G3DSA:1.10.10.60 227 270 5.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 Pfam PF13458 Periplasmic binding protein 32 369 2.8E-91 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 PANTHER PTHR30483:SF17 6 406 1.6E-216 T 22-04-2016 TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 Gene3D G3DSA:3.40.50.2300 162 306 8.6E-18 T 22-04-2016 TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 PANTHER PTHR30483 6 406 1.6E-216 T 22-04-2016 TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 SUPERFAMILY SSF53822 32 404 3.26E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 Gene3D G3DSA:3.40.50.2300 307 354 2.4E-29 T 22-04-2016 TMO_RS10740 1bc3aea8a387a356016a9696788c3530 406 Gene3D G3DSA:3.40.50.2300 29 159 2.4E-29 T 22-04-2016 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 PANTHER PTHR24220 11 261 2.8E-109 T 22-04-2016 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 Pfam PF00005 ABC transporter 25 186 4.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 PANTHER PTHR24220:SF408 11 261 2.8E-109 T 22-04-2016 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 SMART SM00382 34 265 3.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 Gene3D G3DSA:3.40.50.300 8 248 1.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 10 255 8.9E-92 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 TMO_RS10525 22069f584a191aa8bc717ad6843a69b8 284 SUPERFAMILY SSF52540 8 248 5.92E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09320 7ae7ced77d182dd8c5fb45b4e3f0336e 329 PANTHER PTHR10846 18 315 4.6E-58 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 TMO_RS09320 7ae7ced77d182dd8c5fb45b4e3f0336e 329 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 313 1.5E-72 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 TMO_RS09320 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Pfam PF01699 Sodium/calcium exchanger protein 178 318 1.9E-30 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 TMO_RS09320 7ae7ced77d182dd8c5fb45b4e3f0336e 329 Pfam PF01699 Sodium/calcium exchanger protein 3 142 5.1E-22 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 TMO_RS11515 5f555f9d3aa82f677ac12a00a71b8374 263 SMART SM00382 30 211 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS11515 5f555f9d3aa82f677ac12a00a71b8374 263 SUPERFAMILY SSF52540 6 225 1.36E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11515 5f555f9d3aa82f677ac12a00a71b8374 263 PANTHER PTHR24220 7 233 1.2E-63 T 22-04-2016 TMO_RS11515 5f555f9d3aa82f677ac12a00a71b8374 263 Pfam PF00005 ABC transporter 21 163 1.0E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS11515 5f555f9d3aa82f677ac12a00a71b8374 263 Gene3D G3DSA:3.40.50.300 5 228 2.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 Gene3D G3DSA:3.40.190.10 183 259 6.9E-8 T 22-04-2016 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 6.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.2E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 Gene3D G3DSA:3.40.190.10 89 182 7.7E-21 T 22-04-2016 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 PANTHER PTHR30126 1 276 2.2E-98 T 22-04-2016 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 SUPERFAMILY SSF46785 1 111 1.65E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 PANTHER PTHR30126:SF10 1 276 2.2E-98 T 22-04-2016 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 SUPERFAMILY SSF53850 88 296 1.46E-37 T 22-04-2016 TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 Gene3D G3DSA:1.10.10.10 1 81 6.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06325 179352bb72c1f32d952e41ae2bebf86e 300 Pfam PF03466 LysR substrate binding domain 88 293 2.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 PANTHER PTHR12715 10 308 1.7E-77 T 22-04-2016 TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 SUPERFAMILY SSF103481 45 146 3.79E-11 T 22-04-2016 TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 PANTHER PTHR12715:SF17 10 308 1.7E-77 T 22-04-2016 TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 SUPERFAMILY SSF103481 194 293 1.44E-13 T 22-04-2016 TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 Pfam PF00892 EamA-like transporter family 14 143 4.8E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS03745 7d626e2d252c8782d171d26ad8c9037c 317 Pfam PF00892 EamA-like transporter family 158 293 4.0E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 SUPERFAMILY SSF53850 7 256 1.4E-68 T 22-04-2016 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 PANTHER PTHR18966:SF191 11 252 7.3E-49 T 22-04-2016 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 6.3E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 Gene3D G3DSA:3.40.190.10 32 112 1.3E-41 T 22-04-2016 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 Gene3D G3DSA:3.40.190.10 215 257 1.3E-41 T 22-04-2016 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 PANTHER PTHR18966 11 252 7.3E-49 T 22-04-2016 TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 SMART SM00062 35 256 2.3E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS14440 1c9d20cdb2d879b1802448e1e897b7dc 258 Gene3D G3DSA:3.40.190.10 113 208 1.3E-25 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.30.360.10 162 312 9.4E-56 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 PANTHER PTHR21499:SF2 16 332 1.2E-120 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF55021 353 431 4.25E-10 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 PIRSF PIRSF000098 13 441 1.2E-153 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF01842 ACT domain 362 427 7.8E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 PANTHER PTHR21499 16 332 1.2E-120 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF51735 15 153 8.41E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.30.70.260 362 431 1.2E-8 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 22 142 1.1E-12 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Pfam PF00742 Homoserine dehydrogenase 150 328 2.7E-64 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 SUPERFAMILY SSF55347 150 315 2.68E-53 T 22-04-2016 TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 Gene3D G3DSA:3.40.50.720 15 161 1.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09770 d6d5e707700867f2aaeadd2fa25b5197 442 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 196 218 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 PANTHER PTHR30460 403 787 1.2E-100 T 22-04-2016 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 Pfam PF00924 Mechanosensitive ion channel 578 778 1.0E-38 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 SUPERFAMILY SSF82861 534 619 9.42E-14 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 Gene3D G3DSA:2.30.30.60 637 677 4.6E-8 T 22-04-2016 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 Gene3D G3DSA:3.30.70.100 692 776 2.8E-8 T 22-04-2016 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 SUPERFAMILY SSF82689 686 787 6.54E-20 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 SUPERFAMILY SSF50182 621 683 1.37E-10 T 22-04-2016 IPR010920 LSM domain TMO_RS28940 28730b4f6fe90cd3a2207df20098ca26 867 PANTHER PTHR30460:SF0 403 787 1.2E-100 T 22-04-2016 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 SUPERFAMILY SSF53383 65 424 3.23E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 Gene3D G3DSA:3.90.1150.10 291 426 1.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 PIRSF PIRSF001434 28 426 5.1E-127 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 PANTHER PTHR11808 7 426 7.2E-208 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 Gene3D G3DSA:3.40.640.10 40 289 2.3E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 42 423 1.2E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 PANTHER PTHR11808:SF36 7 426 7.2E-208 T 22-04-2016 TMO_RS16795 dcd6a89f489cedb5203996bf38c1d41d 426 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 42 423 8.9E-176 T 22-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 PANTHER PTHR21000 3 576 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 PANTHER PTHR21000:SF2 3 576 0.0 T 22-04-2016 TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 SUPERFAMILY SSF52016 378 562 4.63E-58 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 SUPERFAMILY SSF143975 3 376 6.02E-125 T 22-04-2016 TMO_RS15475 8e16c1fac568bd25712b85c269abe9c7 576 Pfam PF00920 Dehydratase family 41 557 1.4E-177 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 187 8.1E-14 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 PANTHER PTHR21343:SF6 255 442 6.7E-121 T 22-04-2016 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 Gene3D G3DSA:3.40.50.300 6 199 2.9E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 4 443 39.771 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 PANTHER PTHR21343:SF6 5 238 6.7E-121 T 22-04-2016 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 Gene3D G3DSA:3.40.50.880 263 438 1.5E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 PANTHER PTHR21343 5 238 6.7E-121 T 22-04-2016 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 PANTHER PTHR21343 255 442 6.7E-121 T 22-04-2016 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 7 440 2.4E-89 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 441 3.0E-29 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 SUPERFAMILY SSF52540 6 200 1.51E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13950 d794fd512746bb3bdd8dcee36ab10cee 446 SUPERFAMILY SSF52317 252 440 1.05E-22 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 SMART SM00382 32 234 5.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 Pfam PF00005 ABC transporter 24 177 4.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 PANTHER PTHR24220:SF358 9 244 6.3E-82 T 22-04-2016 TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 SUPERFAMILY SSF52540 6 244 3.18E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 Gene3D G3DSA:3.40.50.300 4 244 3.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04065 ffa3077f3860f175e80545148be6eb83 249 PANTHER PTHR24220 9 244 6.3E-82 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Gene3D G3DSA:3.30.70.20 216 252 2.0E-10 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Gene3D G3DSA:3.30.70.20 319 345 2.0E-10 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF12801 4Fe-4S binding domain 109 147 1.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 SUPERFAMILY SSF54862 175 252 3.56E-23 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 SUPERFAMILY SSF54862 118 140 3.56E-23 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 SUPERFAMILY SSF54862 309 392 3.56E-23 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Gene3D G3DSA:2.60.40.10 399 524 7.1E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 PANTHER PTHR24960:SF45 8 256 6.3E-76 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 PANTHER PTHR24960:SF45 301 435 6.3E-76 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 398 523 1.3E-8 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF13746 4Fe-4S dicluster domain 303 361 5.2E-26 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Pfam PF13746 4Fe-4S dicluster domain 221 259 6.6E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 Gene3D G3DSA:3.30.70.20 277 318 6.2E-5 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 PANTHER PTHR24960 8 256 6.3E-76 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 PANTHER PTHR24960 301 435 6.3E-76 T 22-04-2016 TMO_RS11490 1492cd3307c32cd75b6abf6229733a84 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 309 320 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS09830 57846e96c54675ba389a121e99521a72 262 Gene3D G3DSA:2.60.120.10 13 88 1.5E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS09830 57846e96c54675ba389a121e99521a72 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 237 2.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 253 2.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 Pfam PF12833 Helix-turn-helix domain 177 255 1.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF51182 9 172 1.48E-20 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS09830 57846e96c54675ba389a121e99521a72 262 PANTHER PTHR11019 2 261 4.4E-85 T 22-04-2016 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 PANTHER PTHR11019:SF99 2 261 4.4E-85 T 22-04-2016 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 SMART SM00342 171 253 2.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 Gene3D G3DSA:1.10.10.60 209 253 6.8E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF46689 154 206 2.24E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 249 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 Gene3D G3DSA:1.10.10.60 150 208 1.8E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 SUPERFAMILY SSF46689 208 254 2.55E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09830 57846e96c54675ba389a121e99521a72 262 Pfam PF02311 AraC-like ligand binding domain 25 119 8.5E-9 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 SUPERFAMILY SSF48008 80 214 4.45E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 4.3E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 Gene3D G3DSA:1.20.120.530 78 217 1.2E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 Gene3D G3DSA:1.10.10.10 4 76 1.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 Pfam PF07729 FCD domain 85 204 2.6E-21 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 PANTHER PTHR11751 15 100 2.6E-20 T 22-04-2016 TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 SUPERFAMILY SSF46785 6 99 2.22E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 PANTHER PTHR11751:SF362 15 100 2.6E-20 T 22-04-2016 TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 SMART SM00345 17 74 4.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS03370 e483944f5734c2e27b8ebf3e91657d11 235 SMART SM00895 84 205 5.6E-16 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 SMART SM01008 18 139 7.1E-46 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 SUPERFAMILY SSF54665 3 159 2.88E-40 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 186 292 5.0E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 PANTHER PTHR11908:SF76 4 597 4.3E-276 T 22-04-2016 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 PANTHER PTHR11908:SF76 621 789 4.3E-276 T 22-04-2016 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 634 782 1.1E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 373 464 1.1E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 SUPERFAMILY SSF56003 131 782 8.77E-203 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 720 7.1E-174 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 139 3.3E-23 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 PANTHER PTHR11908 4 597 4.3E-276 T 22-04-2016 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 PANTHER PTHR11908 621 789 4.3E-276 T 22-04-2016 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 128 185 1.6E-44 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 294 370 1.6E-44 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.30.365.10 465 632 2.4E-48 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS10840 4256cbf0a724df4a5fce6b7e6a915455 790 Gene3D G3DSA:3.90.1170.50 3 127 1.4E-37 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 Pfam PF01472 PUA domain 293 366 1.4E-20 T 22-04-2016 IPR002478 PUA domain GO:0003723 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 ProSitePatterns PS00902 Glutamate 5-kinase signature. 224 241 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 Gene3D G3DSA:3.40.1160.10 20 271 2.1E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 Hamap MF_00456 Glutamate 5-kinase [proB]. 21 274 35.407 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 Gene3D G3DSA:2.30.130.10 290 381 8.6E-29 T 22-04-2016 IPR015947 PUA-like domain TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 SMART SM00359 293 375 1.3E-18 T 22-04-2016 IPR002478 PUA domain GO:0003723 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 226 246 9.7E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 9.7E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 93 121 9.7E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 165 192 9.7E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PRINTS PR00474 Glutamate 5-kinase family signature 133 154 9.7E-50 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 SUPERFAMILY SSF53633 21 271 5.89E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 SUPERFAMILY SSF88697 292 382 1.71E-24 T 22-04-2016 IPR015947 PUA-like domain TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PANTHER PTHR11063:SF12 20 385 5.1E-113 T 22-04-2016 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PIRSF PIRSF000729 17 383 7.9E-120 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 9.4E-119 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 PANTHER PTHR11063 20 385 5.1E-113 T 22-04-2016 TMO_RS14960 fbc298f6a4644e7bdce6f17e2a8c234b 401 Pfam PF00696 Amino acid kinase family 21 250 7.3E-40 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS29520 9c99e1d00872725fb7925136fd0e5969 155 Gene3D G3DSA:3.40.630.30 2 140 5.6E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS29520 9c99e1d00872725fb7925136fd0e5969 155 SUPERFAMILY SSF55729 3 144 4.75E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS29520 9c99e1d00872725fb7925136fd0e5969 155 Pfam PF13302 Acetyltransferase (GNAT) domain 2 126 2.1E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS29520 9c99e1d00872725fb7925136fd0e5969 155 PANTHER PTHR13256 2 147 2.5E-25 T 22-04-2016 TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 SUPERFAMILY SSF48498 95 221 1.69E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 PANTHER PTHR30055:SF73 3 196 1.7E-16 T 22-04-2016 TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 Gene3D G3DSA:1.10.357.10 8 219 4.9E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 64 3.9E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 SUPERFAMILY SSF46689 10 86 9.23E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29425 e669090266eea4da1005dda6f258a6cc 230 PANTHER PTHR30055 3 196 1.7E-16 T 22-04-2016 TMO_RS14460 65c648c64405d8325a540b536631a816 301 Gene3D G3DSA:1.10.10.60 216 256 6.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14460 65c648c64405d8325a540b536631a816 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 2.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS14460 65c648c64405d8325a540b536631a816 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 2.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS14460 65c648c64405d8325a540b536631a816 301 PANTHER PTHR11019 33 265 1.4E-79 T 22-04-2016 TMO_RS14460 65c648c64405d8325a540b536631a816 301 Gene3D G3DSA:2.60.120.10 29 83 3.4E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS14460 65c648c64405d8325a540b536631a816 301 SMART SM00342 175 257 2.8E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14460 65c648c64405d8325a540b536631a816 301 Pfam PF12833 Helix-turn-helix domain 183 257 4.1E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14460 65c648c64405d8325a540b536631a816 301 SUPERFAMILY SSF51182 22 184 3.45E-20 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS14460 65c648c64405d8325a540b536631a816 301 Gene3D G3DSA:1.10.10.60 156 211 2.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14460 65c648c64405d8325a540b536631a816 301 Pfam PF07883 Cupin domain 30 82 5.9E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS14460 65c648c64405d8325a540b536631a816 301 SUPERFAMILY SSF46689 214 256 4.39E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14460 65c648c64405d8325a540b536631a816 301 PANTHER PTHR11019:SF99 33 265 1.4E-79 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 529 3.9E-27 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PANTHER PTHR32089 278 557 4.3E-95 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PANTHER PTHR32089 186 245 4.3E-95 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 Gene3D G3DSA:1.10.287.950 316 517 1.2E-38 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 SMART SM00283 300 554 4.4E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PANTHER PTHR32089:SF40 278 557 4.3E-95 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PANTHER PTHR32089:SF40 186 245 4.3E-95 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF02203 Tar ligand binding domain homologue 1 170 5.5E-13 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 Pfam PF00672 HAMP domain 191 253 2.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 SMART SM00304 210 263 7.3E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 SUPERFAMILY SSF158472 210 256 4.71E-8 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 SUPERFAMILY SSF58104 275 553 3.58E-52 T 22-04-2016 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 6.4E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS02815 c7f5eca48c64d8c8926d7f9f59867044 560 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 6.4E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 PANTHER PTHR33175 5 93 1.3E-41 T 22-04-2016 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 SUPERFAMILY SSF47729 5 94 4.27E-27 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 4 95 5.5E-38 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 PANTHER PTHR33175:SF2 5 93 1.3E-41 T 22-04-2016 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 Pfam PF00216 Bacterial DNA-binding protein 5 93 4.4E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 44 59 1.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 78 92 1.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 PRINTS PR01727 Prokaryotic integration host factor signature 62 75 1.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 Gene3D G3DSA:4.10.520.10 4 95 1.2E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 SMART SM00411 5 94 7.0E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09100 f124001cf015cf554228c9fe08548358 114 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 3 99 26.908 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 SMART SM01193 4 134 9.1E-90 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 Gene3D G3DSA:3.20.20.120 129 424 9.6E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 SUPERFAMILY SSF54826 3 138 4.07E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 422 1.3E-207 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 Gene3D G3DSA:3.30.390.10 4 126 1.1E-53 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PANTHER PTHR11902 1 420 3.8E-254 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 Pfam PF03952 Enolase, N-terminal domain 4 134 5.1E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 SMART SM01192 139 425 5.4E-222 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 Hamap MF_00318 Enolase [eno]. 2 411 44.688 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PIRSF PIRSF001400 1 425 2.3E-187 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 334 348 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 363 380 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 161 174 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 311 322 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 37 51 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 PRINTS PR00148 Enolase signature 107 123 1.4E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 2.4E-134 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 SUPERFAMILY SSF51604 139 423 1.57E-129 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS08775 d02b154a39f7dea77d497cc991faa594 429 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 SUPERFAMILY SSF52540 4 191 1.27E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 SUPERFAMILY SSF90002 277 362 1.31E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 Gene3D G3DSA:3.30.1220.10 251 354 7.0E-12 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 Gene3D G3DSA:3.40.50.300 4 202 6.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 PANTHER PTHR13748 240 316 2.2E-60 T 22-04-2016 TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 PANTHER PTHR13748 4 215 2.2E-60 T 22-04-2016 TMO_RS05710 5549b83a3ee770410ac2eb47f21f67ab 367 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 189 2.1E-43 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 SUPERFAMILY SSF50090 1 224 1.88E-74 T 22-04-2016 IPR008990 Electron transport accessory protein-like domain TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 Gene3D G3DSA:1.10.472.20 1 140 9.9E-40 T 22-04-2016 TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 Pfam PF02211 Nitrile hydratase beta subunit 1 223 5.6E-79 T 22-04-2016 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 Gene3D G3DSA:2.30.30.50 141 224 1.8E-35 T 22-04-2016 TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 TIGRFAM TIGR03888 nitrile_beta: nitrile hydratase, beta subunit 1 224 2.0E-71 T 22-04-2016 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02325 9cf75b60861f75b869a1205a3fb0fd97 224 PIRSF PIRSF001427 1 224 1.9E-67 T 22-04-2016 IPR003168 Nitrile hydratase, beta subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00823 Phosphopantetheine attachment site 2465 2536 3.7E-14 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1866 1926 1.5E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF13602 Zinc-binding dehydrogenase 2020 2159 9.8E-22 T 22-04-2016 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2182 2362 1.5E-58 T 22-04-2016 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM01294 2466 2532 1.6E-4 T 22-04-2016 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 2438 2456 8.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 2181 2364 8.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.47.10 19 285 7.3E-103 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.90.180.10 1850 1927 4.8E-14 T 22-04-2016 IPR011032 GroES-like TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2491 2506 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 2177 2417 3.36E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 1586 1597 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 573 871 7.6E-109 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 1627 1819 2.73E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 186 202 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF14765 Polyketide synthase dehydratase 934 1216 1.2E-65 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08659 KR domain 2182 2359 1.2E-63 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF47336 2461 2535 5.37E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.30.70.250 696 754 2.4E-4 T 22-04-2016 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF52151 763 863 6.54E-68 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF52151 571 699 6.54E-68 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53335 1349 1582 6.81E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF55048 697 761 2.35E-9 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.720 1941 2133 4.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 21 273 4.5E-90 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 401 529 4.1E-20 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00550 Phosphopantetheine attachment site 2467 2532 6.3E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00829 1849 2159 6.7E-172 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 281 399 6.3E-40 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00826 934 1093 4.4E-39 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:1.10.1200.10 2464 2530 4.3E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF08242 Methyltransferase domain 1423 1522 6.6E-17 T 22-04-2016 IPR013217 Methyltransferase type 12 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SMART SM00825 Beta-ketoacyl synthase 23 451 4.5E-213 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.47.10 288 451 5.3E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Pfam PF00698 Acyl transferase domain 571 873 6.8E-63 T 22-04-2016 IPR014043 Acyl transferase TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53901 426 448 1.77E-102 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53901 169 394 1.77E-102 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF53901 20 142 1.77E-102 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF51735 1951 2109 1.11E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.366.10 761 872 1.5E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.366.10 571 693 1.5E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 PANTHER PTHR11712 21 2537 0.0 T 22-04-2016 TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 Gene3D G3DSA:3.40.50.150 1399 1574 7.8E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS02495 42059754a8fd8a83fcfe0c1b21b996a9 2538 SUPERFAMILY SSF50129 1845 1978 9.43E-31 T 22-04-2016 IPR011032 GroES-like TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 Gene3D G3DSA:3.40.50.980 332 442 1.1E-26 T 22-04-2016 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 SUPERFAMILY SSF56801 180 442 4.84E-58 T 22-04-2016 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 Pfam PF00501 AMP-binding enzyme 191 442 3.3E-44 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 PRINTS PR00154 AMP-binding signature 332 340 1.8E-5 T 22-04-2016 IPR020459 AMP-binding TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 PRINTS PR00154 AMP-binding signature 320 331 1.8E-5 T 22-04-2016 IPR020459 AMP-binding TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 ProSitePatterns PS00455 Putative AMP-binding domain signature. 325 336 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 PANTHER PTHR24095 128 443 1.7E-58 T 22-04-2016 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 SUPERFAMILY SSF52777 2 141 1.11E-14 T 22-04-2016 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 Gene3D G3DSA:3.40.50.980 182 331 3.2E-38 T 22-04-2016 TMO_RS29940 f7ede6302c5464d11af19563238043ea 443 PANTHER PTHR24095:SF137 128 443 1.7E-58 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 Gene3D G3DSA:3.90.10.10 117 170 1.5E-12 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 Gene3D G3DSA:3.90.10.10 210 221 1.5E-12 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 Pfam PF14522 Cytochrome c7 and related cytochrome c 126 221 3.7E-6 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 Gene3D G3DSA:3.90.10.10 48 93 3.6E-7 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 SUPERFAMILY SSF48695 39 186 1.5E-44 T 22-04-2016 IPR011031 Multihaem cytochrome TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 PANTHER PTHR39425:SF1 1 222 2.5E-62 T 22-04-2016 TMO_RS07390 1e829c37bfb670e753d620ad5108b459 222 PANTHER PTHR39425 1 222 2.5E-62 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 21 339 1.0E-94 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 SUPERFAMILY SSF53067 67 151 2.52E-29 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 SUPERFAMILY SSF53067 20 38 2.52E-29 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 170 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 21 34 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 296 305 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 125 144 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 181 202 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 104 124 9.1E-45 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PANTHER PTHR11735 1 369 3.5E-142 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 18 368 61.595 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 Gene3D G3DSA:3.30.420.40 20 186 2.9E-43 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 PANTHER PTHR11735:SF6 1 369 3.5E-142 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 Pfam PF00814 Glycoprotease family 52 340 9.6E-97 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 SUPERFAMILY SSF53067 131 342 7.92E-42 T 22-04-2016 TMO_RS00445 1f8b4e27497cbb3c28ced08d4d884fae 385 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 21 346 9.3E-120 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS05560 6212f4b488cead05994131528508ca6b 220 Gene3D G3DSA:1.10.287.500 124 165 1.9E-10 T 22-04-2016 TMO_RS05560 6212f4b488cead05994131528508ca6b 220 Gene3D G3DSA:1.10.287.500 77 123 7.9E-8 T 22-04-2016 TMO_RS05560 6212f4b488cead05994131528508ca6b 220 Pfam PF04344 Chemotaxis phosphatase, CheZ 123 219 1.3E-7 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- TMO_RS05560 6212f4b488cead05994131528508ca6b 220 SUPERFAMILY SSF75708 52 220 6.8E-36 T 22-04-2016 TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.970 371 558 3.9E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.1220 196 348 2.7E-19 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 PANTHER PTHR18968:SF133 1 558 1.2E-98 T 22-04-2016 TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 22 190 1.4E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 PANTHER PTHR18968 1 558 1.2E-98 T 22-04-2016 TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52518 16 197 2.5E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 342 1.3E-6 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52518 376 558 1.53E-32 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Gene3D G3DSA:3.40.50.970 21 195 5.2E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 SUPERFAMILY SSF52467 215 346 6.87E-17 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS10145 9d051ef1c9684ed1845916420f1599d6 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 429 556 2.8E-22 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 SUPERFAMILY SSF47413 16 80 2.09E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 Pfam PF01381 Helix-turn-helix 23 72 1.5E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 Pfam PF07883 Cupin domain 139 187 5.4E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 SUPERFAMILY SSF51182 104 189 2.89E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 PANTHER PTHR10245 15 187 1.3E-29 T 22-04-2016 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 Gene3D G3DSA:2.60.120.10 106 192 7.2E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 Gene3D G3DSA:1.10.260.40 16 84 5.5E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 SMART SM00530 22 77 2.8E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS13940 c96d15aa4cb7f372c60dd7ef0f35fd65 192 PANTHER PTHR10245:SF9 15 187 1.3E-29 T 22-04-2016 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 15 371 2.1E-99 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 PIRSF PIRSF006769 7 377 1.6E-124 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 Pfam PF01872 RibD C-terminal domain 156 356 1.3E-47 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 369 2.4E-54 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 PANTHER PTHR11079 6 230 1.7E-55 T 22-04-2016 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 SUPERFAMILY SSF53597 154 371 1.2E-58 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 Gene3D G3DSA:3.40.140.10 11 137 1.8E-27 T 22-04-2016 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 PANTHER PTHR11079:SF10 6 230 1.7E-55 T 22-04-2016 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 108 3.6E-14 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 Gene3D G3DSA:3.40.430.10 138 369 3.5E-71 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain TMO_RS09170 644940372cb0a9db37dfb4b5e9b645e9 383 SUPERFAMILY SSF53927 11 151 1.43E-41 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 SUPERFAMILY SSF55048 131 200 6.54E-15 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 PANTHER PTHR10982 4 311 8.7E-136 T 22-04-2016 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 Gene3D G3DSA:3.40.366.10 4 125 1.9E-67 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 Gene3D G3DSA:3.40.366.10 200 307 1.9E-67 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 PIRSF PIRSF000446 1 313 9.8E-92 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 Pfam PF00698 Acyl transferase domain 5 278 2.9E-36 T 22-04-2016 IPR014043 Acyl transferase TMO_RS09385 02e82c3684526acf193119eb37d88506 313 Gene3D G3DSA:3.30.70.250 128 199 2.7E-23 T 22-04-2016 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 293 5.7E-95 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 302 2.2E-38 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain TMO_RS09385 02e82c3684526acf193119eb37d88506 313 SUPERFAMILY SSF52151 193 311 1.91E-73 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS09385 02e82c3684526acf193119eb37d88506 313 SUPERFAMILY SSF52151 3 125 1.91E-73 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 PIRSF PIRSF006205 1 380 8.1E-141 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 SUPERFAMILY SSF69055 286 377 1.06E-29 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 SUPERFAMILY SSF51735 1 144 5.76E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Gene3D G3DSA:3.40.50.720 1 144 9.4E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Pfam PF13288 DXP reductoisomerase C-terminal domain 255 371 2.6E-40 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 140 223 7.0E-38 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 376 44.677 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 SUPERFAMILY SSF55347 120 258 3.6E-58 T 22-04-2016 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Gene3D G3DSA:1.10.1740.10 297 377 3.5E-28 T 22-04-2016 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 374 9.1E-137 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 PANTHER PTHR30525 1 380 3.5E-195 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08925 332ff67c59abe7ebddbe4c315050da14 380 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 126 4.6E-38 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 SUPERFAMILY SSF53474 9 274 8.11E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 Pfam PF12697 Alpha/beta hydrolase family 30 267 4.3E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 Gene3D G3DSA:3.40.50.1820 10 273 1.1E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.8E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.8E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 1.8E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15240 6d059baf0cbda1570986bcfe3ac1f5ef 276 PANTHER PTHR10992 17 275 5.7E-34 T 22-04-2016 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00789 Chorismate synthase signature 3. 323 339 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 Pfam PF01264 Chorismate synthase 10 349 5.2E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 Gene3D G3DSA:3.60.150.10 9 355 7.7E-158 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 PIRSF PIRSF001456 3 355 1.4E-139 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 SUPERFAMILY SSF103263 4 355 7.33E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 PANTHER PTHR21085 2 356 1.5E-203 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 TIGRFAM TIGR00033 aroC: chorismate synthase 10 353 4.9E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS04935 46f96d10bd0a4c018fd81ada66607d81 357 Hamap MF_00300 Chorismate synthase [aroC]. 10 356 36.763 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 SMART SM01358 33 277 1.2E-10 T 22-04-2016 IPR032255 Helical bimodular sensor domain TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 493 520 6.4E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 522 551 6.4E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 206 6.4E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 676 1.0E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 Gene3D G3DSA:1.10.287.950 414 619 2.9E-39 T 22-04-2016 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 SMART SM00283 395 677 1.0E-29 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 Pfam PF00672 HAMP domain 287 355 7.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 SMART SM00304 306 359 1.6E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 SUPERFAMILY SSF58104 408 648 4.05E-46 T 22-04-2016 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 SUPERFAMILY SSF58104 326 361 4.05E-46 T 22-04-2016 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PANTHER PTHR32089 117 260 1.4E-63 T 22-04-2016 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PANTHER PTHR32089 280 633 1.4E-63 T 22-04-2016 TMO_RS11850 3c783557797558b0b59c146d85eab9fa 748 PANTHER PTHR32089 662 680 1.4E-63 T 22-04-2016 TMO_RS11635 109302bbda4949d002159880850af930 608 Pfam PF13522 Glutamine amidotransferase domain 67 192 8.8E-22 T 22-04-2016 TMO_RS11635 109302bbda4949d002159880850af930 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 4.9E-236 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 TMO_RS11635 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.40.50.10490 441 608 8.4E-63 T 22-04-2016 TMO_RS11635 109302bbda4949d002159880850af930 608 Pfam PF01380 SIS domain 293 415 8.8E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 TMO_RS11635 109302bbda4949d002159880850af930 608 Pfam PF01380 SIS domain 466 590 6.0E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 TMO_RS11635 109302bbda4949d002159880850af930 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 39.243 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 TMO_RS11635 109302bbda4949d002159880850af930 608 PANTHER PTHR10937 1 608 2.1E-299 T 22-04-2016 TMO_RS11635 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.60.20.10 2 230 2.3E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS11635 109302bbda4949d002159880850af930 608 SUPERFAMILY SSF56235 2 232 1.46E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS11635 109302bbda4949d002159880850af930 608 PANTHER PTHR10937:SF0 1 608 2.1E-299 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 TMO_RS11635 109302bbda4949d002159880850af930 608 SUPERFAMILY SSF53697 246 608 1.84E-107 T 22-04-2016 TMO_RS11635 109302bbda4949d002159880850af930 608 Gene3D G3DSA:3.40.50.10490 244 440 4.0E-58 T 22-04-2016 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 Gene3D G3DSA:1.10.10.60 230 264 8.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 PANTHER PTHR11019 10 271 1.4E-88 T 22-04-2016 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 PANTHER PTHR11019:SF66 10 271 1.4E-88 T 22-04-2016 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 SUPERFAMILY SSF46689 220 265 1.12E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 Gene3D G3DSA:1.10.10.60 163 217 4.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 Gene3D G3DSA:2.60.120.10 37 99 1.1E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 SMART SM00342 181 263 1.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 Pfam PF12833 Helix-turn-helix domain 187 264 3.4E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS10260 f1a43e17e443f46ba61977a0020e6c71 272 SUPERFAMILY SSF51182 39 220 4.09E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 SUPERFAMILY SSF52096 276 535 1.97E-87 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 Gene3D G3DSA:3.90.226.10 29 272 3.8E-83 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 Gene3D G3DSA:3.90.226.10 277 530 8.1E-95 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 PANTHER PTHR22855:SF35 1 535 0.0 T 22-04-2016 TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-152 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 SUPERFAMILY SSF52096 22 269 3.27E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12970 65f46f250b5d1d1eff99237c0f124855 535 PANTHER PTHR22855 1 535 0.0 T 22-04-2016 TMO_RS04170 06200b6a491558b77562af0f797a7e5f 313 Pfam PF02219 Methylenetetrahydrofolate reductase 26 298 1.0E-83 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 TMO_RS04170 06200b6a491558b77562af0f797a7e5f 313 Gene3D G3DSA:3.20.20.220 27 305 8.9E-95 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like TMO_RS04170 06200b6a491558b77562af0f797a7e5f 313 PANTHER PTHR21091 157 292 6.5E-32 T 22-04-2016 TMO_RS04170 06200b6a491558b77562af0f797a7e5f 313 SUPERFAMILY SSF51730 26 302 1.26E-91 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like TMO_RS04170 06200b6a491558b77562af0f797a7e5f 313 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 27 297 1.0E-91 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 TMO_RS17030 66d49d84f3e4f575bf34bc5c90ae3a96 137 SMART SM00530 7 63 2.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17030 66d49d84f3e4f575bf34bc5c90ae3a96 137 Gene3D G3DSA:1.10.260.40 4 62 2.2E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17030 66d49d84f3e4f575bf34bc5c90ae3a96 137 Pfam PF12844 Helix-turn-helix domain 5 58 3.8E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17030 66d49d84f3e4f575bf34bc5c90ae3a96 137 SUPERFAMILY SSF47413 3 58 1.45E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:1.20.140.10 215 375 2.3E-69 T 22-04-2016 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:2.40.110.10 119 214 4.3E-37 T 22-04-2016 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 SUPERFAMILY SSF47203 226 375 3.54E-58 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 PANTHER PTHR10909 1 377 4.6E-177 T 22-04-2016 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Gene3D G3DSA:1.10.540.10 3 118 4.8E-46 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 115 7.8E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 122 134 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 PANTHER PTHR10909:SF305 1 377 4.6E-177 T 22-04-2016 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 4.6E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 SUPERFAMILY SSF56645 2 240 7.33E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS12980 1512ea47f347e4085c95b1775c97456a 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 214 2.8E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 Pfam PF02911 Formyl transferase, C-terminal domain 215 312 6.6E-24 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 Pfam PF00551 Formyl transferase 14 191 6.0E-43 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 PANTHER PTHR11138 13 312 1.7E-113 T 22-04-2016 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 14 311 2.7E-86 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 Gene3D G3DSA:3.10.25.10 218 321 2.6E-25 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 Gene3D G3DSA:3.40.50.170 12 216 1.2E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 13 315 35.519 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 144 167 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 SUPERFAMILY SSF53328 12 215 9.42E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS13605 820004241d0991416a744f2155e7cf2b 322 SUPERFAMILY SSF50486 217 314 6.28E-25 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 SUPERFAMILY SSF58104 171 443 1.2E-54 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 Pfam PF11563 Protoglobin 11 165 1.2E-13 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 SUPERFAMILY SSF46458 10 158 3.02E-7 T 22-04-2016 IPR009050 Globin-like TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 SMART SM00283 190 444 2.7E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 PANTHER PTHR32089:SF56 168 447 2.9E-90 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 PANTHER PTHR32089:SF56 54 65 2.9E-90 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 Gene3D G3DSA:1.10.287.950 214 408 4.0E-42 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 PANTHER PTHR32089 168 447 2.9E-90 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 PANTHER PTHR32089 54 65 2.9E-90 T 22-04-2016 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 265 443 1.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS13660 c67590bed6347e62013e858e63fefce3 451 Gene3D G3DSA:1.10.490.10 9 158 2.0E-7 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS03320 a8720e718211e26d186532da84fa0a3d 196 Pfam PF02954 Bacterial regulatory protein, Fis family 156 189 1.2E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS03320 a8720e718211e26d186532da84fa0a3d 196 SUPERFAMILY SSF46689 144 189 1.33E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03320 a8720e718211e26d186532da84fa0a3d 196 SUPERFAMILY SSF52172 35 132 5.73E-7 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS03320 a8720e718211e26d186532da84fa0a3d 196 Gene3D G3DSA:1.10.10.60 146 186 1.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 PANTHER PTHR24221:SF161 238 1003 4.1E-133 T 22-04-2016 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 Pfam PF00005 ABC transporter 785 933 5.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 SUPERFAMILY SSF90123 446 756 1.57E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 TIGRFAM TIGR03797 NHLM_micro_ABC2: NHLM bacteriocin system ABC transporter, ATP-binding protein 310 1002 5.1E-254 T 22-04-2016 IPR022515 NHPM bacteriocin system ABC transporter, ATP-binding protein TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 Gene3D G3DSA:1.20.1560.10 448 756 3.6E-36 T 22-04-2016 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 SMART SM00382 794 983 2.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 Gene3D G3DSA:3.40.50.300 767 995 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 SUPERFAMILY SSF52540 759 1002 5.33E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 ProSitePatterns PS00211 ABC transporters family signature. 905 919 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 PANTHER PTHR24221 238 1003 4.1E-133 T 22-04-2016 TMO_RS07620 ad144f2f3ebeb5549d909df38b64c44f 1003 Pfam PF00664 ABC transporter transmembrane region 453 724 1.8E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS05740 d92e1cb61032b1027b8a2e16416ba946 132 PANTHER PTHR23022 3 116 4.5E-14 T 22-04-2016 TMO_RS05740 d92e1cb61032b1027b8a2e16416ba946 132 Gene3D G3DSA:1.10.10.10 3 54 0.001 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05740 d92e1cb61032b1027b8a2e16416ba946 132 Pfam PF13518 Helix-turn-helix domain 10 57 2.9E-9 T 22-04-2016 TMO_RS05740 d92e1cb61032b1027b8a2e16416ba946 132 SUPERFAMILY SSF46689 1 110 1.93E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13075 65301dc5948dd7f9446276747e8d45e2 88 PANTHER PTHR10029 5 88 4.9E-25 T 22-04-2016 TMO_RS13075 65301dc5948dd7f9446276747e8d45e2 88 Pfam PF00708 Acylphosphatase 3 82 1.5E-21 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_RS13075 65301dc5948dd7f9446276747e8d45e2 88 SUPERFAMILY SSF54975 3 84 1.2E-23 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_RS13075 65301dc5948dd7f9446276747e8d45e2 88 Gene3D G3DSA:3.30.70.100 3 82 1.0E-26 T 22-04-2016 TMO_RS13075 65301dc5948dd7f9446276747e8d45e2 88 ProSitePatterns PS00151 Acylphosphatase signature 2. 29 45 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 Gene3D G3DSA:3.40.50.300 10 251 4.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 SMART SM00382 33 243 5.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 Pfam PF00005 ABC transporter 26 180 4.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 PANTHER PTHR24220 10 254 1.2E-138 T 22-04-2016 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 PANTHER PTHR24220:SF585 10 254 1.2E-138 T 22-04-2016 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 9 256 1.2E-123 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 TMO_RS17660 4600ce02bc351d399b0bfeaca0ea6144 256 SUPERFAMILY SSF52540 9 243 2.28E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 150 20.547 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 148 1.5E-46 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 Gene3D G3DSA:3.100.10.10 32 149 1.9E-26 T 22-04-2016 TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 SUPERFAMILY SSF52080 4 149 4.32E-43 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 PANTHER PTHR12934 1 149 1.2E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13160 cae87c463fa8e68686b2dbf89001792e 160 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 148 8.3E-36 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 SMART SM00411 1 91 8.8E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 28.901 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 SUPERFAMILY SSF47729 1 92 7.51E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.57E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.57E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.57E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 PANTHER PTHR33175:SF5 1 91 3.6E-43 T 22-04-2016 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 PANTHER PTHR33175 1 91 3.6E-43 T 22-04-2016 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 Gene3D G3DSA:4.10.520.10 1 92 9.3E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.2E-45 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 TMO_RS16290 1980f5eb0f83d7eee233e084b70fcd8a 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.3E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 23 206 39.232 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 133 143 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 Pfam PF01227 GTP cyclohydrolase I 28 205 7.7E-75 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 Gene3D G3DSA:1.10.286.10 22 74 2.1E-23 T 22-04-2016 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 PANTHER PTHR11109 24 205 9.3E-95 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 SUPERFAMILY SSF55620 18 206 4.22E-75 T 22-04-2016 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 29 206 1.0E-63 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 85 101 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS16785 7f8e921dc5bbce9276ac4d889537ddb4 211 Gene3D G3DSA:3.30.1130.10 79 206 4.0E-56 T 22-04-2016 TMO_RS16745 03c84e6c53a7e43dedbf9724a651606d 275 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 16 248 2.3E-21 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TMO_RS16745 03c84e6c53a7e43dedbf9724a651606d 275 PANTHER PTHR23344 3 249 8.9E-31 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 TMO_RS16745 03c84e6c53a7e43dedbf9724a651606d 275 SUPERFAMILY SSF51695 12 251 4.19E-41 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 TMO_RS16745 03c84e6c53a7e43dedbf9724a651606d 275 Gene3D G3DSA:3.20.20.190 12 250 3.8E-45 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 PANTHER PTHR10459 201 523 4.6E-58 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Pfam PF04675 DNA ligase N terminus 3 160 5.2E-5 T 22-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:2.40.50.140 408 528 3.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 230 238 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:3.30.470.30 235 348 1.3E-23 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Pfam PF04679 ATP dependent DNA ligase C terminal region 424 514 2.0E-13 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 SUPERFAMILY SSF56091 203 403 2.04E-49 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:3.30.1490.70 202 234 7.2E-18 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Gene3D G3DSA:3.30.1490.70 360 404 7.2E-18 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 PANTHER PTHR10459:SF10 201 523 4.6E-58 T 22-04-2016 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 SUPERFAMILY SSF50249 408 528 3.6E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 Pfam PF01068 ATP dependent DNA ligase domain 219 403 3.0E-26 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 TMO_RS10395 5c7a0221308ba8326690f170769168d6 538 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 526 5.1E-228 T 22-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family TMO_RS10045 8cbbd40cb9d956d8c6745c1fa1f2d118 327 PANTHER PTHR22911 15 321 9.8E-37 T 22-04-2016 TMO_RS10045 8cbbd40cb9d956d8c6745c1fa1f2d118 327 SUPERFAMILY SSF103481 83 179 1.96E-11 T 22-04-2016 TMO_RS10045 8cbbd40cb9d956d8c6745c1fa1f2d118 327 SUPERFAMILY SSF103481 225 324 2.62E-13 T 22-04-2016 TMO_RS10045 8cbbd40cb9d956d8c6745c1fa1f2d118 327 Pfam PF00892 EamA-like transporter family 192 317 7.1E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS10045 8cbbd40cb9d956d8c6745c1fa1f2d118 327 Pfam PF00892 EamA-like transporter family 44 175 4.6E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 PANTHER PTHR13774 1 269 5.5E-85 T 22-04-2016 TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 PANTHER PTHR13774:SF17 1 269 5.5E-85 T 22-04-2016 TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 Gene3D G3DSA:3.10.310.10 1 124 6.1E-40 T 22-04-2016 TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 261 5.8E-30 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 Pfam PF02567 Phenazine biosynthesis-like protein 6 258 6.1E-56 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 PIRSF PIRSF016184 1 262 2.5E-50 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 Gene3D G3DSA:3.10.310.10 125 251 1.6E-34 T 22-04-2016 TMO_RS16610 2a7021da1bfba9b3af7d3d51771a8ac3 276 SUPERFAMILY SSF54506 2 260 1.03E-69 T 22-04-2016 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 SUPERFAMILY SSF47203 230 367 4.57E-6 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:2.40.110.10 151 216 9.1E-6 T 22-04-2016 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 PANTHER PTHR10909 44 377 4.0E-39 T 22-04-2016 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 SUPERFAMILY SSF56645 26 233 3.24E-17 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:1.20.140.10 247 390 3.1E-6 T 22-04-2016 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 PANTHER PTHR10909:SF284 44 377 4.0E-39 T 22-04-2016 TMO_RS15360 42edbcf5f704ebdc84951ec0ab3dec09 394 Gene3D G3DSA:1.10.540.10 27 125 2.2E-4 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.30.30 53 110 4.7E-31 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 PANTHER PTHR19375 2 638 0.0 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:2.60.34.10 385 526 8.4E-75 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain TMO_RS17495 8e25d961058140094194383146841efc 642 Pfam PF00012 Hsp70 protein 4 599 2.1E-277 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 38.024 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 TMO_RS17495 8e25d961058140094194383146841efc 642 PANTHER PTHR19375:SF173 2 638 0.0 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site TMO_RS17495 8e25d961058140094194383146841efc 642 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site TMO_RS17495 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF53067 186 377 2.07E-68 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF100934 502 599 4.32E-22 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain TMO_RS17495 8e25d961058140094194383146841efc 642 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site TMO_RS17495 8e25d961058140094194383146841efc 642 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 599 7.6E-302 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:1.20.1270.10 527 598 4.8E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 360 380 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 383 402 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 138 158 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 329 345 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 197 207 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 PRINTS PR00301 70kDa heat shock protein signature 464 480 5.4E-81 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS17495 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF100920 379 535 8.37E-64 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 4 52 6.7E-67 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 119 191 6.7E-67 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 314 356 1.4E-36 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.30.420.40 192 224 1.4E-36 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 SUPERFAMILY SSF53067 4 184 3.63E-68 T 22-04-2016 TMO_RS17495 8e25d961058140094194383146841efc 642 Gene3D G3DSA:3.90.640.10 225 310 6.2E-31 T 22-04-2016 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PANTHER PTHR12128 1 294 1.8E-126 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 1.8E-102 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 SUPERFAMILY SSF51569 5 292 2.41E-106 T 22-04-2016 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PIRSF PIRSF001365 1 300 3.9E-93 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 3.6E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 65.201 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 Gene3D G3DSA:3.20.20.70 3 293 2.2E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 SMART SM01130 5 292 1.8E-146 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.2E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.2E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 4.2E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 4.2E-34 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 TMO_RS07965 9645e4f2be7a8118305f4987776b0918 303 PANTHER PTHR12128:SF34 1 294 1.8E-126 T 22-04-2016 TMO_RS15155 df832327284e494a33ab8b0080328665 291 PANTHER PTHR11117 1 290 5.3E-205 T 22-04-2016 TMO_RS15155 df832327284e494a33ab8b0080328665 291 Pfam PF02629 CoA binding domain 7 99 2.8E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS15155 df832327284e494a33ab8b0080328665 291 Gene3D G3DSA:3.40.50.261 120 288 4.8E-76 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15155 df832327284e494a33ab8b0080328665 291 SUPERFAMILY SSF51735 1 122 1.58E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15155 df832327284e494a33ab8b0080328665 291 SUPERFAMILY SSF52210 123 290 1.22E-55 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15155 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.0E-41 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 4.0E-41 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 4.0E-41 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 4.0E-41 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 Pfam PF00549 CoA-ligase 151 272 9.8E-22 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15155 df832327284e494a33ab8b0080328665 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site TMO_RS15155 df832327284e494a33ab8b0080328665 291 PIRSF PIRSF001553 1 290 4.8E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS15155 df832327284e494a33ab8b0080328665 291 SMART SM00881 4 100 4.6E-36 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS15155 df832327284e494a33ab8b0080328665 291 Gene3D G3DSA:3.40.50.720 3 119 3.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15155 df832327284e494a33ab8b0080328665 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 4.2E-144 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 PANTHER PTHR10909 5 384 1.2E-148 T 22-04-2016 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 SUPERFAMILY SSF47203 229 381 1.01E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:2.40.110.10 121 218 4.9E-43 T 22-04-2016 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 8.6E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:1.10.540.10 5 119 4.6E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 9.4E-30 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Gene3D G3DSA:1.20.140.10 219 383 1.6E-64 T 22-04-2016 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 SUPERFAMILY SSF56645 6 243 9.95E-80 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS01160 4067741fc7975fcaea48a1178e1d0313 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 378 2.5E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS12720 69923115520385997ec216ae0e4e9482 248 Gene3D G3DSA:3.30.450.40 86 242 2.3E-34 T 22-04-2016 IPR029016 GAF domain-like TMO_RS12720 69923115520385997ec216ae0e4e9482 248 Gene3D G3DSA:1.10.10.10 4 74 1.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12720 69923115520385997ec216ae0e4e9482 248 SUPERFAMILY SSF46785 6 77 2.68E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12720 69923115520385997ec216ae0e4e9482 248 Pfam PF01614 Bacterial transcriptional regulator 127 241 2.0E-4 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS12720 69923115520385997ec216ae0e4e9482 248 Pfam PF09339 IclR helix-turn-helix domain 9 58 1.3E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS12720 69923115520385997ec216ae0e4e9482 248 PANTHER PTHR30136 6 241 4.7E-30 T 22-04-2016 TMO_RS12720 69923115520385997ec216ae0e4e9482 248 SUPERFAMILY SSF55781 87 242 3.2E-25 T 22-04-2016 IPR029016 GAF domain-like TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.50.50.60 146 280 3.0E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF00364 Biotin-requiring enzyme 5 77 4.3E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PIRSF PIRSF000350 36 605 2.1E-81 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 549 564 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 341 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 447 454 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 195 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 289 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 419 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 170 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 571 591 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 484 505 7.1E-65 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 404 420 2.5E-36 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 432 454 2.5E-36 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 2.5E-36 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 168 2.5E-36 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 277 295 2.5E-36 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF51905 144 476 2.29E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 181 191 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PANTHER PTHR22912 146 600 9.5E-200 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 PANTHER PTHR22912:SF125 146 600 9.5E-200 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF51230 1 97 7.59E-30 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:2.40.50.100 2 96 8.8E-35 T 22-04-2016 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.50.50.60 281 473 4.1E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Gene3D G3DSA:3.30.390.30 474 606 5.1E-46 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 488 596 1.9E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 147 607 2.3E-170 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 467 2.5E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS08615 a6af2f8a5981256a9587d1adb79785bb 607 SUPERFAMILY SSF55424 486 606 7.9E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 PANTHER PTHR19136:SF78 301 546 1.4E-43 T 22-04-2016 TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 Gene3D G3DSA:3.40.980.10 176 297 1.8E-12 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 SUPERFAMILY SSF53218 182 302 1.17E-15 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 PANTHER PTHR19136 301 546 1.4E-43 T 22-04-2016 TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 Gene3D G3DSA:3.90.550.10 349 546 9.1E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 PIRSF PIRSF036626 1 547 1.3E-162 T 22-04-2016 IPR012184 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 SUPERFAMILY SSF53448 351 538 1.43E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS05890 61f64cff510e2e5a704bf80aa8d8b2bd 563 Pfam PF12804 MobA-like NTP transferase domain 354 516 3.4E-40 T 22-04-2016 IPR025877 MobA-like NTP transferase TMO_RS27000 770a3881d54a0d470801539b3c11b434 264 Pfam PF02608 Basic membrane protein 39 247 6.4E-38 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 TMO_RS27000 770a3881d54a0d470801539b3c11b434 264 Gene3D G3DSA:3.40.50.2300 117 258 1.4E-43 T 22-04-2016 TMO_RS27000 770a3881d54a0d470801539b3c11b434 264 PANTHER PTHR34296 10 262 9.7E-48 T 22-04-2016 TMO_RS27000 770a3881d54a0d470801539b3c11b434 264 SUPERFAMILY SSF53822 24 212 4.94E-6 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 10 349 3.9E-118 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 Gene3D G3DSA:3.40.1690.10 220 355 4.4E-56 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PANTHER PTHR30531:SF0 5 359 1.3E-115 T 22-04-2016 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 230 247 4.9E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 210 228 4.9E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 274 289 4.9E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 304 325 4.9E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 12 34 4.9E-41 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 SUPERFAMILY SSF160544 247 353 2.49E-39 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 10 355 1.1E-117 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 TMO_RS05670 2dc9bf4cbc40cda923554caae0eeeefb 359 PANTHER PTHR30531 5 359 1.3E-115 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 1.4E-19 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 PANTHER PTHR11615 344 675 0.0 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 PANTHER PTHR11615 3 317 0.0 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF54292 1 74 7.27E-22 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 5.1E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 639 673 3.6E-15 T 22-04-2016 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Pfam PF00384 Molybdopterin oxidoreductase 271 598 1.5E-68 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.10.20.30 4 52 5.2E-6 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS09915 3d5029215de7402920e13cc288797432 692 PANTHER PTHR11615:SF115 344 675 0.0 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 PANTHER PTHR11615:SF115 3 317 0.0 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF54862 75 211 2.85E-39 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.40.50.740 495 628 2.7E-51 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 Gene3D G3DSA:3.40.50.740 271 407 2.7E-51 T 22-04-2016 TMO_RS09915 3d5029215de7402920e13cc288797432 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 597 3.6E-232 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 SMART SM00929 83 123 9.7E-21 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS09915 3d5029215de7402920e13cc288797432 692 SUPERFAMILY SSF53706 213 632 5.44E-101 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Pfam PF00501 AMP-binding enzyme 15 414 5.8E-103 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 SUPERFAMILY SSF56801 7 511 4.84E-154 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 PANTHER PTHR24096 1 508 1.7E-204 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 PANTHER PTHR24096:SF229 1 508 1.7E-204 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:3.40.50.980 173 333 3.6E-40 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:3.40.50.980 8 172 2.1E-37 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:3.30.300.30 409 507 8.2E-31 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Gene3D G3DSA:2.30.38.10 334 405 2.5E-26 T 22-04-2016 TMO_RS17640 0c409f44d68065fda6683b589ea199cc 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 498 9.4E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 PANTHER PTHR24220:SF470 9 222 4.7E-98 T 22-04-2016 TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 7 220 4.4E-81 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 SUPERFAMILY SSF52540 7 221 2.24E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 Pfam PF00005 ABC transporter 24 171 1.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 Gene3D G3DSA:3.40.50.300 7 222 3.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 PANTHER PTHR24220 9 222 4.7E-98 T 22-04-2016 TMO_RS00685 03f0eed968fd03cfa21a78f282a0cd12 223 SMART SM00382 33 220 5.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 SUPERFAMILY SSF54368 5 101 2.49E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 SMART SM01230 103 379 6.1E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 6 468 3.1E-197 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 SUPERFAMILY SSF55931 103 468 2.35E-132 T 22-04-2016 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.9E-132 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 Gene3D G3DSA:3.10.20.70 5 106 2.4E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 PANTHER PTHR20852:SF15 3 139 1.8E-248 T 22-04-2016 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 PANTHER PTHR20852:SF15 162 469 1.8E-248 T 22-04-2016 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 PANTHER PTHR20852 3 139 1.8E-248 T 22-04-2016 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 PANTHER PTHR20852 162 469 1.8E-248 T 22-04-2016 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 96 1.4E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 Gene3D G3DSA:3.30.590.10 107 456 2.1E-128 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 TMO_RS10040 37f8f9b7386a868956ae6315284265b4 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 Pfam PF01979 Amidohydrolase family 50 428 3.4E-36 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 SUPERFAMILY SSF51556 51 377 2.08E-70 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 PANTHER PTHR11271 15 455 2.5E-157 T 22-04-2016 TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 SUPERFAMILY SSF51338 360 453 1.22E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 PANTHER PTHR11271:SF4 15 455 2.5E-157 T 22-04-2016 IPR010252 Formiminoglutamate deiminase TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 1 454 1.5E-185 T 22-04-2016 IPR010252 Formiminoglutamate deiminase TMO_RS11805 2a31a77abe05dd4ddfa03c18f40c5628 455 Gene3D G3DSA:3.20.20.140 55 396 2.1E-72 T 22-04-2016 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 Gene3D G3DSA:3.40.1410.10 85 254 1.2E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 Gene3D G3DSA:1.10.10.10 19 84 3.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PANTHER PTHR11751 139 162 3.0E-17 T 22-04-2016 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PANTHER PTHR11751 26 92 3.0E-17 T 22-04-2016 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 SUPERFAMILY SSF64288 77 254 3.14E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 SMART SM00866 110 250 6.0E-25 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 19 252 4.5E-76 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 SUPERFAMILY SSF46785 19 91 2.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 6.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 6.5E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 Pfam PF07702 UTRA domain 111 249 3.8E-29 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 89 5.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PANTHER PTHR11751:SF292 139 162 3.0E-17 T 22-04-2016 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 PANTHER PTHR11751:SF292 26 92 3.0E-17 T 22-04-2016 TMO_RS10580 31ea9f72fea7a5b4b9411969d014bc9f 270 SMART SM00345 30 89 2.3E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS08150 c72f5773a4625f50c632bd4f8d3c0382 261 Pfam PF04367 Protein of unknown function (DUF502) 105 210 2.7E-37 T 22-04-2016 IPR007462 Protein of unknown function DUF502 TMO_RS08150 c72f5773a4625f50c632bd4f8d3c0382 261 PANTHER PTHR31876 24 253 5.4E-66 T 22-04-2016 TMO_RS08150 c72f5773a4625f50c632bd4f8d3c0382 261 PANTHER PTHR31876:SF1 24 253 5.4E-66 T 22-04-2016 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 Gene3D G3DSA:3.30.70.20 174 243 1.5E-7 T 22-04-2016 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 Pfam PF08331 Domain of unknown function (DUF1730) 47 123 1.2E-20 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 Pfam PF13484 4Fe-4S double cluster binding domain 175 239 7.0E-19 T 22-04-2016 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 PANTHER PTHR30002:SF4 1 280 6.0E-112 T 22-04-2016 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 2 280 6.6E-109 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 SUPERFAMILY SSF46548 122 239 1.62E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 176 187 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS18810 176e7eb28b08400c7ca0cca428fe3f32 280 PANTHER PTHR30002 1 280 6.0E-112 T 22-04-2016 TMO_RS05250 7a08e2edf221c8e06a4e8531be418348 320 Pfam PF04773 FecR protein 117 208 5.5E-20 T 22-04-2016 IPR006860 FecR protein TMO_RS05250 7a08e2edf221c8e06a4e8531be418348 320 Pfam PF16220 Domain of unknown function (DUF4880) 16 58 2.7E-8 T 22-04-2016 IPR032623 FecR, N-terminal TMO_RS05250 7a08e2edf221c8e06a4e8531be418348 320 PANTHER PTHR30273 11 320 7.5E-48 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS05250 7a08e2edf221c8e06a4e8531be418348 320 PIRSF PIRSF018266 6 320 2.7E-76 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS05250 7a08e2edf221c8e06a4e8531be418348 320 PANTHER PTHR30273:SF2 11 320 7.5E-48 T 22-04-2016 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PIRSF PIRSF004669 1 89 3.3E-31 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.0E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.0E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.0E-18 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PANTHER PTHR34040 1 88 5.4E-32 T 22-04-2016 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 2.9E-31 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 Pfam PF01313 Bacterial export proteins, family 3 6 78 1.7E-29 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 TMO_RS05660 6f59656dff44441ea3e5ce483a795582 91 PANTHER PTHR34040:SF2 1 88 5.4E-32 T 22-04-2016 TMO_RS07360 5d392313d0fddef21e2c61c1ba31ae87 245 PANTHER PTHR33835 14 244 2.6E-22 T 22-04-2016 TMO_RS07360 5d392313d0fddef21e2c61c1ba31ae87 245 SUPERFAMILY SSF56281 11 241 3.55E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 Gene3D G3DSA:2.60.120.10 22 141 4.8E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 Gene3D G3DSA:1.10.10.10 160 232 5.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 SUPERFAMILY SSF51206 19 157 5.11E-23 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 198 2.8E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 198 213 2.8E-5 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 SMART SM00100 26 143 2.2E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 SMART SM00419 175 230 0.0025 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 Pfam PF00027 Cyclic nucleotide-binding domain 45 127 3.8E-11 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 SUPERFAMILY SSF46785 161 232 7.21E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 Pfam PF13545 Crp-like helix-turn-helix domain 163 231 1.6E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 PANTHER PTHR24567 16 233 7.0E-34 T 22-04-2016 TMO_RS04865 ab8d196b7127b888479699ff7beeec6c 233 PANTHER PTHR24567:SF28 16 233 7.0E-34 T 22-04-2016 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 PANTHER PTHR30154:SF28 1 155 1.8E-53 T 22-04-2016 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 Gene3D G3DSA:3.30.70.920 59 155 5.9E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 SMART SM00344 6 115 8.6E-44 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 8.4E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 8.4E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 8.4E-16 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 SUPERFAMILY SSF46785 5 65 2.94E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 PANTHER PTHR30154 1 155 1.8E-53 T 22-04-2016 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 Gene3D G3DSA:1.10.10.10 4 56 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 2.2E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.4E-20 T 22-04-2016 TMO_RS10265 8df20cae3bc0bf59914e99af8446b2aa 165 SUPERFAMILY SSF54909 67 155 8.58E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 118 1.9E-25 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 Pfam PF00361 Proton-conducting membrane transporter 130 420 4.5E-93 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PANTHER PTHR22773 5 588 1.5E-275 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 424 443 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 4.1E-66 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 635 4.3E-265 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PANTHER PTHR22773:SF50 5 588 1.5E-275 T 22-04-2016 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 423 445 4.3E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 4.3E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_RS09890 861c1640f197713760f07baf80ca8ea3 643 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 269 291 4.3E-11 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 TMO_RS23330 4fb4f378991ed660354ff894042e726c 225 SUPERFAMILY SSF89796 93 224 3.01E-50 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS23330 4fb4f378991ed660354ff894042e726c 225 Gene3D G3DSA:3.40.50.10540 93 225 1.2E-49 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS23330 4fb4f378991ed660354ff894042e726c 225 Pfam PF02515 CoA-transferase family III 95 224 1.4E-47 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 Gene3D G3DSA:1.10.520.20 7 113 2.3E-24 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 144 163 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 142 157 9.6E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 157 175 9.6E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 92 106 9.6E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 11 30 9.6E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PRINTS PR00125 ATP synthase delta subunit signature 81 92 9.6E-27 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 Pfam PF00213 ATP synthase delta (OSCP) subunit 11 181 3.3E-51 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 Hamap MF_01416 ATP synthase subunit delta [atpD]. 7 184 20.063 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 12 179 2.5E-38 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 SUPERFAMILY SSF47928 8 112 3.66E-22 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain TMO_RS15060 09fe93378523c54e08442153fb7fdb9f 186 PANTHER PTHR11910 10 186 3.6E-59 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 467 1.8E-159 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF46548 4 157 2.51E-34 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:1.10.1060.10 6 138 3.6E-41 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PANTHER PTHR11938:SF93 22 471 3.3E-139 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.50.50.60 392 470 7.0E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 456 8.0E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 291 305 3.4E-33 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.4E-33 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.4E-33 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 325 338 3.4E-33 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.4E-33 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.50.50.60 244 391 6.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF51971 146 400 2.71E-67 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 1.7E-36 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 SUPERFAMILY SSF51971 374 468 6.36E-12 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.40.50.720 139 164 4.0E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.40.50.720 227 243 4.0E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 PANTHER PTHR11938 22 471 3.3E-139 T 22-04-2016 TMO_RS00950 99da0fd7e7bcb9ee192fb59b2ed6c7e8 481 Gene3D G3DSA:3.50.50.60 165 221 1.5E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 SUPERFAMILY SSF46785 10 68 1.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 PANTHER PTHR30154 2 160 9.4E-80 T 22-04-2016 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 Gene3D G3DSA:3.30.70.920 63 159 2.3E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 1.2E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 4.3E-20 T 22-04-2016 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 SMART SM00344 10 119 2.9E-47 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 9.26E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 9.26E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 9.26E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 SUPERFAMILY SSF54909 72 159 2.68E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 PANTHER PTHR30154:SF0 2 160 9.4E-80 T 22-04-2016 TMO_RS03090 ac117e38d99285cb731e221cbb89cf1f 160 Gene3D G3DSA:1.10.10.10 11 61 1.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12495 e309354fe0d35635d989123392a1593b 189 PANTHER PTHR34583 3 126 6.0E-40 T 22-04-2016 TMO_RS12495 e309354fe0d35635d989123392a1593b 189 PANTHER PTHR34583:SF2 3 126 6.0E-40 T 22-04-2016 TMO_RS12495 e309354fe0d35635d989123392a1593b 189 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 112 2.6E-23 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 Gene3D G3DSA:3.40.190.10 131 269 2.2E-35 T 22-04-2016 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 SUPERFAMILY SSF53850 40 332 5.93E-57 T 22-04-2016 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 Gene3D G3DSA:3.40.190.10 7 126 1.2E-27 T 22-04-2016 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 Gene3D G3DSA:3.40.190.10 270 325 1.2E-27 T 22-04-2016 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 Pfam PF13343 Bacterial extracellular solute-binding protein 79 307 1.6E-47 T 22-04-2016 TMO_RS17565 bfd59d3eaa83ef9de31402a07747edf0 340 PANTHER PTHR30006 40 339 7.7E-47 T 22-04-2016 TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 PANTHER PTHR10192 7 176 3.1E-74 T 22-04-2016 TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 SUPERFAMILY SSF53218 8 173 2.22E-45 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 153 2.1E-32 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 PANTHER PTHR10192:SF18 7 176 3.1E-74 T 22-04-2016 TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 PIRSF PIRSF006443 2 169 2.8E-57 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 11 172 4.3E-73 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 SMART SM00852 17 161 1.0E-33 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 Pfam PF00994 Probable molybdopterin binding domain 18 157 3.0E-34 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS13500 ea5919aa9fd16f4dbb5bdf85de2b4046 179 Gene3D G3DSA:3.40.980.10 8 167 6.4E-46 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 Gene3D G3DSA:3.40.190.10 281 354 3.9E-46 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 Gene3D G3DSA:3.40.190.10 8 138 3.9E-46 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 Gene3D G3DSA:3.40.190.10 139 280 6.1E-53 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 PANTHER PTHR30006:SF10 1 365 8.1E-52 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 PANTHER PTHR30006 1 365 8.1E-52 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 SUPERFAMILY SSF53850 41 307 6.85E-42 T 22-04-2016 TMO_RS01895 5d40c8e52baa1b167a37d7291eaeb8d5 366 Pfam PF13416 Bacterial extracellular solute-binding protein 56 297 1.9E-15 T 22-04-2016 TMO_RS15615 e6e02efe382c059db10e6dab192648c4 104 PANTHER PTHR33219:SF5 1 91 2.7E-18 T 22-04-2016 TMO_RS15615 e6e02efe382c059db10e6dab192648c4 104 Pfam PF02325 YGGT family 15 91 8.6E-23 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 TMO_RS15615 e6e02efe382c059db10e6dab192648c4 104 PANTHER PTHR33219 1 91 2.7E-18 T 22-04-2016 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 Gene3D G3DSA:3.40.640.10 6 257 8.1E-97 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 PIRSF PIRSF001434 1 394 9.6E-144 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 SUPERFAMILY SSF53383 27 391 1.11E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 5.1E-140 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 Gene3D G3DSA:3.90.1150.10 258 391 1.0E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 6 391 8.4E-186 T 22-04-2016 IPR006237 L-methionine gamma-lyase GO:0018826 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 PANTHER PTHR11808:SF14 1 396 4.6E-188 T 22-04-2016 TMO_RS14890 64d62e339e5bd8fb0d68790682473197 401 PANTHER PTHR11808 1 396 4.6E-188 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 Pfam PF13380 CoA binding domain 25 148 8.7E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 SUPERFAMILY SSF51735 19 150 3.94E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 SUPERFAMILY SSF52210 165 309 1.44E-34 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 Gene3D G3DSA:3.40.50.261 143 304 5.0E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 173 307 9.0E-44 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 Gene3D G3DSA:3.40.50.720 19 142 1.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 SMART SM00881 21 114 4.4E-30 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 PANTHER PTHR33303:SF3 14 315 6.3E-84 T 22-04-2016 TMO_RS29590 d2c862061c3be3f037245ca57ff1eb1c 413 PANTHER PTHR33303 14 315 6.3E-84 T 22-04-2016 TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 Pfam PF04055 Radical SAM superfamily 64 197 1.5E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 SMART SM00729 58 284 2.1E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 398 3.5E-169 T 22-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 Gene3D G3DSA:3.80.30.20 66 282 4.2E-13 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 PANTHER PTHR21180:SF9 136 381 7.4E-111 T 22-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 SUPERFAMILY SSF47781 308 381 2.56E-8 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 SUPERFAMILY SSF102114 47 195 3.79E-16 T 22-04-2016 TMO_RS09540 f532023db9aaadc54567dd42a0837244 409 PANTHER PTHR21180 136 381 7.4E-111 T 22-04-2016 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 247 5.6E-54 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 Pfam PF01311 Bacterial export proteins, family 1 10 241 1.1E-57 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PANTHER PTHR30065:SF1 1 235 1.8E-52 T 22-04-2016 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 3.4E-20 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 3.4E-20 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 3.4E-20 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 3.4E-20 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 TMO_RS05665 932fd2fc150685fa0734f0b35f0d77db 251 PANTHER PTHR30065 1 235 1.8E-52 T 22-04-2016 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 Pfam PF00589 Phage integrase family 142 303 1.5E-31 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 Gene3D G3DSA:1.10.443.10 130 311 1.2E-44 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 318 27.926 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 18 100 1.5E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 Gene3D G3DSA:1.10.150.130 15 106 5.7E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 PANTHER PTHR30349 1 332 4.8E-71 T 22-04-2016 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 SUPERFAMILY SSF47823 16 103 1.75E-13 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 SUPERFAMILY SSF56349 125 316 7.65E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_RS15080 5a4d4fa822603e8a4bf5b203b16713fe 336 PANTHER PTHR30349:SF5 1 332 4.8E-71 T 22-04-2016 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 SUPERFAMILY SSF51703 17 505 8.24E-159 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 Gene3D G3DSA:3.40.50.280 516 667 3.1E-50 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 PANTHER PTHR23408:SF15 18 648 5.8E-279 T 22-04-2016 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 SUPERFAMILY SSF52242 513 669 3.79E-47 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 Pfam PF01642 Methylmalonyl-CoA mutase 18 503 3.0E-130 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 19 509 2.7E-142 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 Pfam PF02310 B12 binding domain 544 646 3.6E-15 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 PANTHER PTHR23408 18 648 5.8E-279 T 22-04-2016 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 541 668 4.5E-36 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 TMO_RS00615 548f5ccf9761463acc8f38de238c41b9 676 Gene3D G3DSA:3.20.20.240 17 505 9.1E-175 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 Gene3D G3DSA:1.10.287.950 304 513 2.7E-44 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PANTHER PTHR32089 155 234 3.8E-98 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PANTHER PTHR32089 267 546 3.8E-98 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PANTHER PTHR32089:SF40 155 234 3.8E-98 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PANTHER PTHR32089:SF40 267 546 3.8E-98 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 SUPERFAMILY SSF58104 295 539 9.68E-55 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 SUPERFAMILY SSF58104 227 254 9.68E-55 T 22-04-2016 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 464 493 1.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 310 339 1.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 416 445 1.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 387 414 1.2E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00283 289 543 4.9E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 542 1.6E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00304 199 252 7.3E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS07830 59a91f2c2ebc5e2ffac4ded11e44815b 549 SMART SM00304 417 470 87.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS15495 d4809918d1360d3c937179250492953e 239 SMART SM00895 98 223 5.4E-13 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS15495 d4809918d1360d3c937179250492953e 239 Gene3D G3DSA:1.10.10.10 20 89 5.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15495 d4809918d1360d3c937179250492953e 239 SUPERFAMILY SSF48008 96 230 6.8E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS15495 d4809918d1360d3c937179250492953e 239 SMART SM00345 30 88 3.0E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS15495 d4809918d1360d3c937179250492953e 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 88 6.6E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS15495 d4809918d1360d3c937179250492953e 239 PANTHER PTHR11751 28 114 1.9E-24 T 22-04-2016 TMO_RS15495 d4809918d1360d3c937179250492953e 239 Pfam PF07729 FCD domain 102 221 2.8E-20 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS15495 d4809918d1360d3c937179250492953e 239 PANTHER PTHR11751:SF362 28 114 1.9E-24 T 22-04-2016 TMO_RS15495 d4809918d1360d3c937179250492953e 239 Gene3D G3DSA:1.20.120.530 92 237 5.0E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS15495 d4809918d1360d3c937179250492953e 239 SUPERFAMILY SSF46785 23 92 6.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 689 3.2E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 8.7E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 491 8.7E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 561 590 8.7E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:1.10.287.950 462 657 1.7E-40 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 SUPERFAMILY SSF58104 440 685 1.44E-50 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 SUPERFAMILY SSF58104 376 399 1.44E-50 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF00672 HAMP domain 326 392 1.9E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 SMART SM00283 434 688 2.4E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 Pfam PF02743 Cache domain 47 247 3.4E-16 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 Gene3D G3DSA:3.30.450.20 175 319 3.1E-13 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PANTHER PTHR32089:SF40 113 379 3.4E-102 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PANTHER PTHR32089:SF40 416 691 3.4E-102 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PANTHER PTHR32089 113 379 3.4E-102 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 PANTHER PTHR32089 416 691 3.4E-102 T 22-04-2016 TMO_RS01180 6eda6fa998bdfe4c5635ea45b8dffab5 694 SMART SM00304 344 397 2.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 SMART SM01230 109 365 2.1E-112 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 Gene3D G3DSA:3.10.20.70 3 112 1.9E-13 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 Pfam PF00120 Glutamine synthetase, catalytic domain 111 440 3.9E-105 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 SUPERFAMILY SSF54368 2 107 4.97E-17 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 PANTHER PTHR20852 1 446 9.4E-210 T 22-04-2016 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 PANTHER PTHR20852:SF63 1 446 9.4E-210 T 22-04-2016 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 245 260 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 Gene3D G3DSA:3.30.590.10 113 432 1.8E-96 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 TMO_RS01495 40e0da854deb43b295511f3b53822804 446 SUPERFAMILY SSF55931 110 442 5.59E-108 T 22-04-2016 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 601 634 4.1E-13 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:2.70.20.10 186 319 4.9E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:2.70.20.10 330 464 1.0E-34 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:3.30.65.10 604 635 3.6E-9 T 22-04-2016 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00437 248 518 6.3E-123 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:1.10.460.10 465 603 4.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:1.10.460.10 137 184 4.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01751 Toprim domain 3 115 4.7E-25 T 22-04-2016 IPR006171 Toprim domain TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 790 842 4.0E-17 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 725 777 1.8E-18 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF13368 Topoisomerase C-terminal repeat 663 722 3.1E-14 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 737 53.064 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00493 1 101 4.5E-29 T 22-04-2016 IPR006171 Toprim domain TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 9.7E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 9.7E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 376 392 9.7E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 9.7E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 298 307 9.7E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PANTHER PTHR11390 1 635 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Pfam PF01131 DNA topoisomerase 130 555 5.4E-129 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SUPERFAMILY SSF56712 1 569 3.01E-189 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SUPERFAMILY SSF56712 600 608 3.01E-189 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 PANTHER PTHR11390:SF27 1 635 0.0 T 22-04-2016 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 Gene3D G3DSA:3.40.50.140 1 136 5.8E-44 T 22-04-2016 IPR006171 Toprim domain TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SMART SM00436 106 194 1.4E-51 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 SUPERFAMILY SSF57783 600 635 2.89E-8 T 22-04-2016 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 285 307 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 TMO_RS12850 cb7bfc975806dc26d9d19ac5bfa83ed7 942 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 634 4.1E-241 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.565.10 323 489 5.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:1.10.287.130 274 322 8.7E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00388 268 336 4.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.7E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55874 325 490 6.02E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF47384 254 336 2.75E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 PANTHER PTHR24423 12 495 5.5E-104 T 22-04-2016 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55785 129 246 6.14E-20 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 136 3.1E-22 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 255 1.7E-16 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.450.20 13 126 9.4E-22 T 22-04-2016 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00091 12 78 9.9E-12 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00091 134 200 1.6E-5 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 2.0E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 490 3.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF08447 PAS fold 159 239 4.4E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00387 380 492 1.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Pfam PF00989 PAS fold 14 125 1.4E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SUPERFAMILY SSF55785 23 137 6.98E-25 T 22-04-2016 IPR000014 PAS domain TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 Gene3D G3DSA:3.30.450.20 140 273 2.7E-20 T 22-04-2016 TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00086 206 248 0.0011 T 22-04-2016 IPR001610 PAC motif TMO_RS02605 6d8e4e36b35d9840cd39f035b12ee9f5 498 SMART SM00086 88 129 0.052 T 22-04-2016 IPR001610 PAC motif TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 PANTHER PTHR23115 520 867 2.4E-203 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 PANTHER PTHR23115 893 1039 2.4E-203 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:2.40.30.10 708 801 4.5E-26 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:2.40.30.10 941 1036 8.4E-38 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF00009 Elongation factor Tu GTP binding domain 541 698 1.5E-32 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 540 696 2.1E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 19 56 2.7E-9 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF52156 825 946 6.41E-33 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 461 510 1.1E-15 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF52540 532 709 5.22E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF50447 941 1035 4.32E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 ProSitePatterns PS01176 Initiation factor 2 signature. 990 1012 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:3.40.50.300 536 697 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 SUPERFAMILY SSF50447 710 793 1.46E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 455 1036 2.6E-252 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Gene3D G3DSA:3.40.50.10050 840 918 7.5E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 PANTHER PTHR23115:SF184 520 867 2.4E-203 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 PANTHER PTHR23115:SF184 893 1039 2.4E-203 T 22-04-2016 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 11 1037 17.574 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 TMO_RS17840 d8929e580ac7026562ec8c1d00b2493c 1043 Pfam PF11987 Translation-initiation factor 2 825 929 4.4E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 TMO_RS10910 0e9b5d6e773ac70d8fd175dfd1779049 255 Pfam PF03749 Sugar fermentation stimulation protein 24 240 7.2E-62 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein TMO_RS10910 0e9b5d6e773ac70d8fd175dfd1779049 255 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 15 248 4.1E-49 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein TMO_RS10910 0e9b5d6e773ac70d8fd175dfd1779049 255 PANTHER PTHR30545:SF2 11 254 3.3E-67 T 22-04-2016 TMO_RS10910 0e9b5d6e773ac70d8fd175dfd1779049 255 PANTHER PTHR30545 11 254 3.3E-67 T 22-04-2016 TMO_RS10910 0e9b5d6e773ac70d8fd175dfd1779049 255 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 12 250 47.92 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 PANTHER PTHR13779 11 442 7.4E-179 T 22-04-2016 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:3.40.50.300 11 151 1.4E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 SMART SM00382 46 163 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 SUPERFAMILY SSF48019 240 424 7.48E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 157 1.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF16193 AAA C-terminal domain 181 254 2.7E-18 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 PANTHER PTHR13779:SF7 11 442 7.4E-179 T 22-04-2016 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:1.20.272.10 236 334 2.2E-44 T 22-04-2016 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 SUPERFAMILY SSF52540 11 233 5.18E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:1.10.8.60 152 217 1.6E-6 T 22-04-2016 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Gene3D G3DSA:1.10.3710.10 336 430 3.7E-31 T 22-04-2016 TMO_RS13120 d870e8869d0a1a4121885b4db790ed1c 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 255 420 1.9E-66 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 1.4E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 536 570 3.1E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 SMART SM00382 345 534 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 SMART SM00382 42 241 2.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 SUPERFAMILY SSF52540 13 263 1.63E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Pfam PF00005 ABC transporter 337 484 1.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Pfam PF00005 ABC transporter 34 191 2.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 PANTHER PTHR24220 336 443 8.2E-174 T 22-04-2016 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 PANTHER PTHR24220 15 306 8.2E-174 T 22-04-2016 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Gene3D G3DSA:3.40.50.300 6 270 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 Gene3D G3DSA:3.40.50.300 307 560 1.3E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 SUPERFAMILY SSF52540 311 556 6.48E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 PANTHER PTHR24220:SF442 336 443 8.2E-174 T 22-04-2016 TMO_RS05165 a986a9b506e324046bbee3234e909c95 606 PANTHER PTHR24220:SF442 15 306 8.2E-174 T 22-04-2016 TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 Gene3D G3DSA:1.10.10.10 43 118 3.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 Pfam PF01614 Bacterial transcriptional regulator 172 290 1.4E-23 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 SUPERFAMILY SSF46785 48 121 1.5E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 SMART SM00346 48 138 6.8E-23 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 PANTHER PTHR30136 45 293 1.7E-53 T 22-04-2016 TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 SUPERFAMILY SSF55781 121 292 2.75E-37 T 22-04-2016 IPR029016 GAF domain-like TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 Gene3D G3DSA:3.30.450.40 119 292 6.3E-41 T 22-04-2016 IPR029016 GAF domain-like TMO_RS08240 48448c1ebe8dddbafc6ad72257b38811 293 Pfam PF09339 IclR helix-turn-helix domain 50 100 6.7E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS05760 0411164dcc399a7a7a186b4f378435c9 305 SUPERFAMILY SSF103481 198 300 2.62E-7 T 22-04-2016 TMO_RS05760 0411164dcc399a7a7a186b4f378435c9 305 PANTHER PTHR12715 13 305 1.9E-35 T 22-04-2016 TMO_RS05760 0411164dcc399a7a7a186b4f378435c9 305 SUPERFAMILY SSF103481 53 153 1.83E-11 T 22-04-2016 TMO_RS05760 0411164dcc399a7a7a186b4f378435c9 305 Pfam PF00892 EamA-like transporter family 165 298 1.3E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS05760 0411164dcc399a7a7a186b4f378435c9 305 Pfam PF00892 EamA-like transporter family 19 149 5.0E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 Gene3D G3DSA:1.10.10.10 89 169 4.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 93 150 1.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 SUPERFAMILY SSF46785 89 196 1.58E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 PANTHER PTHR30579 84 197 6.0E-38 T 22-04-2016 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 PANTHER PTHR30579:SF0 84 197 6.0E-38 T 22-04-2016 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 127 138 3.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 106 117 3.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS29920 d785d24163e5984bfe78c1ee7d0ee388 197 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 117 127 3.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 PANTHER PTHR34137 1 69 2.5E-17 T 22-04-2016 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 Gene3D G3DSA:1.10.287.1040 11 74 5.5E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 15 75 15.512 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 SUPERFAMILY SSF116842 9 72 7.98E-20 T 22-04-2016 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 15 55 2.0E-9 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.0E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS04845 3501ea94d57a440d19e48cbaf3f6b971 85 Pfam PF02609 Exonuclease VII small subunit 16 66 1.8E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 381 2.0E-97 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 PANTHER PTHR11808:SF45 1 386 7.3E-157 T 22-04-2016 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 3 383 2.4E-129 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 Gene3D G3DSA:3.40.640.10 2 250 1.4E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 PIRSF PIRSF001434 1 385 6.2E-117 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 SUPERFAMILY SSF53383 17 382 6.33E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 PANTHER PTHR11808 1 386 7.3E-157 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 Gene3D G3DSA:3.90.1150.10 251 383 9.0E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS12670 2934cf19a07dd86fa06fe18e339a394f 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 194 208 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS04060 6302fd7a2ccb6ddce59a03e117081e83 341 PANTHER PTHR30482 4 338 5.6E-37 T 22-04-2016 TMO_RS04060 6302fd7a2ccb6ddce59a03e117081e83 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 297 7.7E-18 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS03450 aec9f10d59dbd01b64a1d8167fd4b377 295 Gene3D G3DSA:3.40.50.1820 49 277 5.5E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS03450 aec9f10d59dbd01b64a1d8167fd4b377 295 PANTHER PTHR23024 55 293 4.4E-34 T 22-04-2016 TMO_RS03450 aec9f10d59dbd01b64a1d8167fd4b377 295 PANTHER PTHR23024:SF163 55 293 4.4E-34 T 22-04-2016 TMO_RS03450 aec9f10d59dbd01b64a1d8167fd4b377 295 SUPERFAMILY SSF53474 13 276 7.97E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS03450 aec9f10d59dbd01b64a1d8167fd4b377 295 Pfam PF07859 alpha/beta hydrolase fold 80 195 8.9E-13 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 TMO_RS12460 eed4d3667f1f70e55c53f628870b314e 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 243 2.0E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12460 eed4d3667f1f70e55c53f628870b314e 259 PANTHER PTHR30151 11 239 1.2E-75 T 22-04-2016 TMO_RS12460 eed4d3667f1f70e55c53f628870b314e 259 PANTHER PTHR30151:SF21 11 239 1.2E-75 T 22-04-2016 TMO_RS12460 eed4d3667f1f70e55c53f628870b314e 259 SUPERFAMILY SSF161098 54 238 1.7E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12460 eed4d3667f1f70e55c53f628870b314e 259 Gene3D G3DSA:1.10.3720.10 54 243 3.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00780 03159374c81b515f116376b842585d31 201 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 4.0E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS00780 03159374c81b515f116376b842585d31 201 PANTHER PTHR11260 1 200 2.6E-31 T 22-04-2016 TMO_RS00780 03159374c81b515f116376b842585d31 201 Gene3D G3DSA:3.40.30.10 1 82 2.2E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00780 03159374c81b515f116376b842585d31 201 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 188 3.1E-7 T 22-04-2016 TMO_RS00780 03159374c81b515f116376b842585d31 201 PANTHER PTHR11260:SF256 1 200 2.6E-31 T 22-04-2016 TMO_RS00780 03159374c81b515f116376b842585d31 201 Gene3D G3DSA:1.20.1050.10 83 200 3.5E-12 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS00780 03159374c81b515f116376b842585d31 201 SUPERFAMILY SSF52833 1 87 1.17E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00780 03159374c81b515f116376b842585d31 201 SUPERFAMILY SSF47616 71 200 6.25E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 415 1.1E-197 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF142984 240 325 6.8E-25 T 22-04-2016 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF140490 326 417 3.66E-36 T 22-04-2016 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 SUPERFAMILY SSF142019 3 239 6.15E-88 T 22-04-2016 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 SMART SM00928 330 375 4.8E-26 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 414 1.3E-29 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 166 181 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 PANTHER PTHR11780 2 426 8.6E-284 T 22-04-2016 TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 216 3.3E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain TMO_RS09920 27a799d188a29ba7a99bcbf7af5db84d 426 Pfam PF10531 SLBB domain 242 291 7.7E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain TMO_RS06515 c0b17593e4a0deeec68700087a71222b 280 SMART SM01133 16 248 1.2E-6 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS06515 c0b17593e4a0deeec68700087a71222b 280 SUPERFAMILY SSF51569 4 264 1.76E-53 T 22-04-2016 TMO_RS06515 c0b17593e4a0deeec68700087a71222b 280 Gene3D G3DSA:3.20.20.70 4 272 1.3E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06515 c0b17593e4a0deeec68700087a71222b 280 Pfam PF01791 DeoC/LacD family aldolase 17 248 5.0E-39 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS06515 c0b17593e4a0deeec68700087a71222b 280 PIRSF PIRSF038992 1 278 3.9E-64 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS13965 b13e9678bbe0e72eaa9389fbd1035283 264 PANTHER PTHR36925 3 254 9.6E-50 T 22-04-2016 TMO_RS13965 b13e9678bbe0e72eaa9389fbd1035283 264 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 7 248 5.9E-58 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 PANTHER PTHR12778:SF11 12 406 9.9E-94 T 22-04-2016 TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 SUPERFAMILY SSF103473 8 406 6.28E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 Pfam PF13000 Acetyl-coenzyme A transporter 1 11 156 7.1E-21 T 22-04-2016 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 Gene3D G3DSA:1.20.1250.20 11 194 8.3E-9 T 22-04-2016 TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 PANTHER PTHR12778 12 406 9.9E-94 T 22-04-2016 TMO_RS02010 f8550e7726ffae7e9d8884b83dd49a0f 420 TIGRFAM TIGR02718 sider_RhtX_FptX: siderophore transporter, RhtX/FptX family 12 398 8.1E-120 T 22-04-2016 IPR014090 Siderophore transporter, RhtX/FptX family TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 SMART SM00304 126 179 4.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 468 1.0E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF08269 Cache domain 8 105 5.8E-29 T 22-04-2016 IPR004010 Double Cache domain 2 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 Pfam PF00672 HAMP domain 108 175 9.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PANTHER PTHR32089:SF56 56 161 3.2E-133 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PANTHER PTHR32089:SF56 193 472 3.2E-133 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 Gene3D G3DSA:3.30.450.20 8 96 1.9E-34 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 SMART SM00283 215 469 1.8E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 Gene3D G3DSA:1.10.287.950 231 437 2.4E-43 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 SUPERFAMILY SSF58104 221 468 1.28E-58 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 SUPERFAMILY SSF58104 154 181 1.28E-58 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PANTHER PTHR32089 56 161 3.2E-133 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PANTHER PTHR32089 193 472 3.2E-133 T 22-04-2016 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 313 340 2.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 342 371 2.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01105 47cf2edb1a65e2aad8a2e68ecd44051b 475 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 236 265 2.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 Pfam PF00719 Inorganic pyrophosphatase 18 171 5.9E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.522 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 PANTHER PTHR10286 12 168 2.7E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 SUPERFAMILY SSF50324 5 173 2.75E-66 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS17375 51aefa4e23b2ceebc840d94853f8d383 175 Gene3D G3DSA:3.90.80.10 5 172 1.1E-58 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 PANTHER PTHR24220:SF151 14 248 4.8E-122 T 22-04-2016 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 SUPERFAMILY SSF50331 251 353 1.87E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 PANTHER PTHR24220 14 248 4.8E-122 T 22-04-2016 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 Pfam PF00005 ABC transporter 28 170 1.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 SUPERFAMILY SSF52540 13 248 1.3E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 Pfam PF08402 TOBE domain 264 345 8.6E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 Gene3D G3DSA:2.40.50.140 282 337 3.6E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 SMART SM00382 37 220 8.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06645 cafe517b7d79beea87420b2d94e9989e 366 Gene3D G3DSA:3.40.50.300 4 245 4.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 303.677 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 177 8.0E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.5E-51 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF52540 1 227 1.47E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 2.0E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:2.40.30.10 196 292 1.3E-25 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.30.70.240 404 492 8.2E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF54980 402 496 3.02E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PANTHER PTHR23115:SF175 400 598 0.0 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PANTHER PTHR23115:SF175 1 376 0.0 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 SUPERFAMILY SSF54980 296 373 6.12E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 3.5E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Pfam PF00679 Elongation factor G C-terminus 402 487 3.3E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.30.70.870 296 372 4.5E-26 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PANTHER PTHR23115 400 598 0.0 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 PANTHER PTHR23115 1 376 0.0 T 22-04-2016 TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 SMART SM00838 401 488 6.4E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 Gene3D G3DSA:3.40.50.300 2 195 7.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01035 b145b27e6d445c109e35c63b45915b74 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 5.3E-295 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 TMO_RS10140 e12d931ccfef5d2185eed7ecf78f891e 319 SUPERFAMILY SSF53474 54 315 6.73E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10140 e12d931ccfef5d2185eed7ecf78f891e 319 PANTHER PTHR40841:SF2 57 319 5.6E-35 T 22-04-2016 TMO_RS10140 e12d931ccfef5d2185eed7ecf78f891e 319 Pfam PF00756 Putative esterase 69 271 1.4E-15 T 22-04-2016 IPR000801 Putative esterase TMO_RS10140 e12d931ccfef5d2185eed7ecf78f891e 319 Gene3D G3DSA:3.40.50.1820 58 315 5.1E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10140 e12d931ccfef5d2185eed7ecf78f891e 319 PANTHER PTHR40841 57 319 5.6E-35 T 22-04-2016 TMO_RS03805 b449a3600c4fc789de5a069425cd1c22 419 SUPERFAMILY SSF103473 4 401 5.89E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS03805 b449a3600c4fc789de5a069425cd1c22 419 Gene3D G3DSA:1.20.1250.20 7 193 1.3E-16 T 22-04-2016 TMO_RS03805 b449a3600c4fc789de5a069425cd1c22 419 PANTHER PTHR23517 5 408 2.4E-31 T 22-04-2016 TMO_RS03805 b449a3600c4fc789de5a069425cd1c22 419 Pfam PF07690 Major Facilitator Superfamily 11 233 1.2E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS03805 b449a3600c4fc789de5a069425cd1c22 419 Gene3D G3DSA:1.20.1250.20 276 402 9.1E-7 T 22-04-2016 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 176 7.1E-65 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 Gene3D G3DSA:3.30.230.40 92 197 9.5E-34 T 22-04-2016 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 PANTHER PTHR23133:SF2 1 197 1.1E-106 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 SUPERFAMILY SSF54211 4 88 2.53E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 Gene3D G3DSA:3.30.230.40 3 90 1.1E-37 T 22-04-2016 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 SUPERFAMILY SSF54211 90 180 8.85E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 PANTHER PTHR23133 1 197 1.1E-106 T 22-04-2016 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 43.664 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 TMO_RS16920 abab243bbc33f5d0458b2a81506446ce 201 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Gene3D G3DSA:3.40.190.10 176 251 9.3E-20 T 22-04-2016 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 SUPERFAMILY SSF53850 88 291 1.3E-44 T 22-04-2016 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Gene3D G3DSA:1.10.10.10 1 87 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 SUPERFAMILY SSF46785 1 110 1.06E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PANTHER PTHR30126 1 291 8.7E-92 T 22-04-2016 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Pfam PF03466 LysR substrate binding domain 87 291 6.5E-47 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 Gene3D G3DSA:3.40.190.10 90 175 8.2E-20 T 22-04-2016 TMO_RS09785 a3f0fd0f8cdbb2ad8a6bb842f7397d2a 292 PANTHER PTHR30126:SF11 1 291 8.7E-92 T 22-04-2016 TMO_RS08220 290d5e634565ceea451a39745926a161 370 SUPERFAMILY SSF53756 11 351 3.9E-56 T 22-04-2016 TMO_RS08220 290d5e634565ceea451a39745926a161 370 Pfam PF13439 Glycosyltransferase Family 4 23 174 5.6E-14 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain TMO_RS08220 290d5e634565ceea451a39745926a161 370 PANTHER PTHR12526:SF363 11 348 1.4E-70 T 22-04-2016 TMO_RS08220 290d5e634565ceea451a39745926a161 370 Gene3D G3DSA:3.40.50.2000 195 312 1.8E-17 T 22-04-2016 TMO_RS08220 290d5e634565ceea451a39745926a161 370 Pfam PF13692 Glycosyl transferases group 1 200 312 1.4E-15 T 22-04-2016 TMO_RS08220 290d5e634565ceea451a39745926a161 370 PANTHER PTHR12526 11 348 1.4E-70 T 22-04-2016 TMO_RS29610 e6b72283126ece750a8f76ee0b157cc3 316 Gene3D G3DSA:3.90.550.10 9 213 1.7E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS29610 e6b72283126ece750a8f76ee0b157cc3 316 PANTHER PTHR22916:SF28 9 227 5.9E-46 T 22-04-2016 TMO_RS29610 e6b72283126ece750a8f76ee0b157cc3 316 SUPERFAMILY SSF53448 9 225 1.22E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS29610 e6b72283126ece750a8f76ee0b157cc3 316 Pfam PF00535 Glycosyl transferase family 2 12 141 3.3E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like TMO_RS29610 e6b72283126ece750a8f76ee0b157cc3 316 PANTHER PTHR22916 9 227 5.9E-46 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 Pfam PF00593 TonB dependent receptor 578 815 3.7E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS05265 49375016db72af229dd01456df80c57b 816 Gene3D G3DSA:2.40.170.20 290 816 5.1E-147 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS05265 49375016db72af229dd01456df80c57b 816 SUPERFAMILY SSF56935 135 816 2.01E-131 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 176 814 3.4E-123 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS05265 49375016db72af229dd01456df80c57b 816 PANTHER PTHR32552:SF17 77 143 2.3E-168 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 PANTHER PTHR32552:SF17 165 816 2.3E-168 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 PANTHER PTHR32552 77 143 2.3E-168 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 PANTHER PTHR32552 165 816 2.3E-168 T 22-04-2016 TMO_RS05265 49375016db72af229dd01456df80c57b 816 Gene3D G3DSA:2.170.130.10 135 286 6.9E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS05265 49375016db72af229dd01456df80c57b 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 175 274 1.9E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS05265 49375016db72af229dd01456df80c57b 816 SMART SM00965 77 128 1.8E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 PANTHER PTHR24220:SF534 3 251 1.1E-109 T 22-04-2016 TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 PANTHER PTHR24220 3 251 1.1E-109 T 22-04-2016 TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 SMART SM00382 31 234 5.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 SUPERFAMILY SSF52540 2 234 8.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 Pfam PF00005 ABC transporter 22 177 6.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00840 ac6c3d46233448cd031ef4cd0a81c2e6 264 Gene3D G3DSA:3.40.50.300 1 234 3.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 PANTHER PTHR12526 155 290 1.9E-101 T 22-04-2016 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 PANTHER PTHR12526 353 471 1.9E-101 T 22-04-2016 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 Gene3D G3DSA:3.90.550.10 3 272 8.2E-89 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 469 4.2E-204 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 Pfam PF01050 Mannose-6-phosphate isomerase 316 466 8.0E-71 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 Gene3D G3DSA:2.60.120.10 360 470 7.1E-46 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 SUPERFAMILY SSF51182 186 470 2.15E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 SUPERFAMILY SSF53448 4 282 1.48E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 Pfam PF00483 Nucleotidyl transferase 6 287 1.4E-66 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 PANTHER PTHR12526:SF387 155 290 1.9E-101 T 22-04-2016 TMO_RS03620 9bc82fcaf6e1ba59952219d358359773 473 PANTHER PTHR12526:SF387 353 471 1.9E-101 T 22-04-2016 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 Pfam PF01047 MarR family 51 110 5.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 PANTHER PTHR33164 1 160 1.8E-38 T 22-04-2016 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 PANTHER PTHR33164:SF4 1 160 1.8E-38 T 22-04-2016 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 SUPERFAMILY SSF46785 8 160 5.12E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 5.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 5.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 5.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 SMART SM00347 42 145 7.5E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03730 52af93b426aa81c639089acdbbdb2c5b 163 Gene3D G3DSA:1.10.10.10 8 160 1.0E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 SUPERFAMILY SSF52172 15 137 5.41E-20 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 Pfam PF00072 Response regulator receiver domain 27 125 4.8E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 SMART SM00862 162 238 4.3E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 238 2.8E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 Gene3D G3DSA:3.40.50.2300 9 135 1.1E-18 T 22-04-2016 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 SUPERFAMILY SSF46894 139 239 4.25E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 Gene3D G3DSA:1.10.10.10 142 240 3.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 SMART SM00448 14 124 1.5E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 PANTHER PTHR26402 14 241 2.6E-43 T 22-04-2016 TMO_RS07645 49aab7924f488e85f01a8dfe11f8871f 241 PANTHER PTHR26402:SF596 14 241 2.6E-43 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 1.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 1.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 1.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 1.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 1.5E-18 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Hamap MF_01961 Catalase-peroxidase [katG]. 6 720 38.723 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PANTHER PTHR30555:SF0 1 719 0.0 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PANTHER PTHR30555 1 719 0.0 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.420.10 575 695 5.6E-40 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 10 720 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 SUPERFAMILY SSF48113 17 426 2.21E-146 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Pfam PF00141 Peroxidase 402 694 3.2E-35 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Pfam PF00141 Peroxidase 67 393 6.9E-49 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 430 574 1.6E-52 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 46 200 4.3E-71 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 235 247 4.3E-71 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.520.10 698 719 1.6E-52 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.420.10 306 405 1.0E-44 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 Gene3D G3DSA:1.10.420.10 248 270 1.0E-44 T 22-04-2016 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 1.9E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 1.9E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 1.9E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 1.9E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 474 500 1.9E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 TMO_RS02885 c75c5dce423e023b10b3f781b1840c8c 720 SUPERFAMILY SSF48113 428 719 2.5E-107 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Gene3D G3DSA:2.60.260.20 111 143 2.0E-21 T 22-04-2016 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Gene3D G3DSA:2.60.260.20 213 256 2.0E-21 T 22-04-2016 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SMART SM00271 4 62 1.2E-31 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PANTHER PTHR24078:SF231 1 372 2.4E-157 T 22-04-2016 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Pfam PF01556 DnaJ C terminal domain 124 338 3.8E-44 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Gene3D G3DSA:1.10.287.110 1 109 3.2E-36 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 354 6.1E-136 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SUPERFAMILY SSF46565 1 106 2.75E-35 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Pfam PF00684 DnaJ central domain 150 210 1.3E-13 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Gene3D G3DSA:2.60.260.20 259 338 2.5E-25 T 22-04-2016 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 42.042 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PRINTS PR00625 DnaJ domain signature 62 81 3.5E-31 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PRINTS PR00625 DnaJ domain signature 42 62 3.5E-31 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-31 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-31 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 PANTHER PTHR24078 1 372 2.4E-157 T 22-04-2016 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SUPERFAMILY SSF49493 119 172 1.96E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SUPERFAMILY SSF49493 216 268 1.96E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SUPERFAMILY SSF57938 137 214 1.26E-21 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Pfam PF00226 DnaJ domain 5 67 6.2E-28 T 22-04-2016 IPR001623 DnaJ domain TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 Gene3D G3DSA:2.10.230.10 144 212 5.3E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 TMO_RS17500 d42798d74092c1e9ae70becf2579b433 383 SUPERFAMILY SSF49493 261 349 9.03E-24 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:2.40.110.10 132 235 3.3E-39 T 22-04-2016 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:1.10.540.10 1 131 3.0E-35 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 246 394 1.5E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 234 1.4E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 128 1.9E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 SUPERFAMILY SSF47203 244 398 3.38E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 SUPERFAMILY SSF56645 2 259 2.75E-69 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 PANTHER PTHR10909 1 397 2.3E-242 T 22-04-2016 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 Gene3D G3DSA:1.20.140.10 236 400 1.4E-49 T 22-04-2016 TMO_RS03285 ddec0eef4f02652249bfd01b9b0a0ee7 403 PANTHER PTHR10909:SF282 1 397 2.3E-242 T 22-04-2016 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 Gene3D G3DSA:1.10.10.60 225 272 2.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF46689 219 269 3.07E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 SMART SM00342 235 318 3.3E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 PANTHER PTHR11019:SF68 76 326 6.9E-59 T 22-04-2016 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 Pfam PF01965 DJ-1/PfpI family 77 180 5.5E-9 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF52317 10 199 3.14E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 Gene3D G3DSA:1.10.10.60 273 320 8.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 Gene3D G3DSA:3.40.50.880 10 224 9.1E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 SUPERFAMILY SSF46689 271 321 1.79E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 Pfam PF12833 Helix-turn-helix domain 241 320 2.3E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14935 06d738f76a2e8122be8dc045e77fe464 328 PANTHER PTHR11019 76 326 6.9E-59 T 22-04-2016 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 PANTHER PTHR11748:SF76 1 479 6.6E-163 T 22-04-2016 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:1.10.45.10 438 477 7.1E-11 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 SUPERFAMILY SSF56176 13 224 3.6E-69 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.465.10 105 225 1.5E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 Gene3D G3DSA:3.30.43.10 4 103 4.7E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 476 2.3E-46 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 PANTHER PTHR11748 1 479 6.6E-163 T 22-04-2016 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 SUPERFAMILY SSF55103 228 479 4.09E-50 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_RS13080 afe16743a41cb0ba3b9691ec569c5abd 479 Pfam PF01565 FAD binding domain 51 186 2.1E-33 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_RS25560 55c3950783ea4134891141b859f7ec53 399 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 1 341 1.0E-110 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane TMO_RS25560 55c3950783ea4134891141b859f7ec53 399 PANTHER PTHR35342:SF4 1 397 2.1E-171 T 22-04-2016 TMO_RS25560 55c3950783ea4134891141b859f7ec53 399 PANTHER PTHR35342 1 397 2.1E-171 T 22-04-2016 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.5E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 Pfam PF16925 Bacterial transcriptional repressor C-terminal 91 193 4.4E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 SUPERFAMILY SSF46689 2 82 5.03E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 PANTHER PTHR30055:SF20 1 191 5.2E-36 T 22-04-2016 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 PANTHER PTHR30055 1 191 5.2E-36 T 22-04-2016 TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 SUPERFAMILY SSF48498 83 193 2.41E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS05595 5ffb45ce49bfd588c1976e31831d4e94 208 Gene3D G3DSA:1.10.357.10 1 192 7.9E-42 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF55124 529 651 3.76E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 8 806 1.1E-251 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 2.2E-9 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 2.2E-9 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.2E-9 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.2E-9 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.50.50.60 114 309 3.2E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.30.413.10 645 776 7.1E-35 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PIRSF PIRSF037149 1 818 8.6E-287 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.6E-19 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.6E-19 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.6E-19 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.6E-19 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.6E-19 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF51905 149 310 3.96E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 689 705 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Gene3D G3DSA:3.50.50.60 3 113 3.2E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF56014 644 806 7.59E-51 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF04324 BFD-like [2Fe-2S] binding domain 428 475 1.1E-12 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF04324 BFD-like [2Fe-2S] binding domain 494 543 1.1E-7 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PANTHER PTHR22912 7 416 1.2E-115 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 SUPERFAMILY SSF51905 7 195 2.21E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 283 6.9E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00397 Sirohaem Fe-binding site signature 689 707 3.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PRINTS PR00397 Sirohaem Fe-binding site signature 646 664 3.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 PANTHER PTHR22912:SF1 7 416 1.2E-115 T 22-04-2016 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 643 776 5.6E-28 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS10810 6dccb21cddb21b2dc87548db14e1a0b8 825 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 569 633 1.7E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 Pfam PF03922 OmpW family 41 221 8.0E-56 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 213 221 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 Gene3D G3DSA:2.40.160.20 41 221 3.5E-59 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 PANTHER PTHR36920:SF1 14 221 9.8E-59 T 22-04-2016 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 SUPERFAMILY SSF56925 40 221 6.02E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 TMO_RS02255 4a64f6a0043811ebbd197723793b8978 221 PANTHER PTHR36920 14 221 9.8E-59 T 22-04-2016 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 ProSitePatterns PS00674 AAA-protein family signature. 296 314 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 SMART SM00382 188 328 5.2E-24 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 SUPERFAMILY SSF140990 408 602 1.31E-64 T 22-04-2016 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 601 35.522 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 PANTHER PTHR23076 9 602 6.9E-280 T 22-04-2016 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Gene3D G3DSA:3.40.50.300 147 334 3.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 192 325 2.0E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 600 2.9E-210 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Gene3D G3DSA:1.10.8.60 335 401 4.1E-27 T 22-04-2016 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Pfam PF01434 Peptidase family M41 386 597 1.8E-70 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 SUPERFAMILY SSF52540 147 397 1.04E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07555 35136c61db99252a5bb155b498bde20c 604 Pfam PF06480 FtsH Extracellular 10 95 5.3E-7 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:1.20.140.10 222 386 1.3E-55 T 22-04-2016 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 SUPERFAMILY SSF47203 230 385 1.11E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 3.0E-23 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:1.10.540.10 6 117 2.8E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 SUPERFAMILY SSF56645 6 244 1.7E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 PANTHER PTHR10909 7 387 2.4E-261 T 22-04-2016 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 1.6E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Gene3D G3DSA:2.40.110.10 121 221 4.0E-31 T 22-04-2016 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 PANTHER PTHR10909:SF285 7 387 2.4E-261 T 22-04-2016 TMO_RS02670 e11f1237cff2c1456bc9a4bc57971285 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 2.1E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 PIRSF PIRSF000447 1 421 4.6E-157 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 PANTHER PTHR11712 1 421 2.0E-178 T 22-04-2016 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 2.5E-161 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 Gene3D G3DSA:3.40.47.10 272 420 8.1E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 376 4.5E-37 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 SUPERFAMILY SSF53901 1 260 1.23E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 SMART SM00825 Beta-ketoacyl synthase 4 421 1.4E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 162 178 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 255 1.2E-59 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 SUPERFAMILY SSF53901 223 420 4.74E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS07760 2d42ac0a4ff69d69f69de3edfb0c9773 421 Gene3D G3DSA:3.40.47.10 2 265 2.4E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 SUPERFAMILY SSF75217 84 245 1.15E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 Pfam PF04452 RNA methyltransferase 27 241 2.5E-49 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 PIRSF PIRSF015601 16 245 1.8E-49 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 PANTHER PTHR30027 5 249 4.2E-51 T 22-04-2016 TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 SUPERFAMILY SSF88697 17 77 1.02E-12 T 22-04-2016 IPR015947 PUA-like domain TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 PANTHER PTHR30027:SF3 5 249 4.2E-51 T 22-04-2016 TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 Gene3D G3DSA:3.40.1280.10 6 245 1.2E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS14225 77dc7d259450d42f6e8b7ac323ff06bc 257 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 25 242 7.9E-31 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF55186 68 243 2.75E-61 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.54.20 136 190 3.7E-20 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Pfam PF02824 TGS domain 6 65 1.7E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF81271 6 65 4.36E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.930.10 245 534 4.0E-111 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.40.50.800 535 634 4.8E-31 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Pfam PF03129 Anticodon binding domain 545 634 1.6E-18 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF55681 246 530 1.65E-91 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 533 9.8E-44 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 630 3.7E-205 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 222 2.2E-13 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.10.20.30 6 67 1.1E-19 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 638 32.713 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 SUPERFAMILY SSF52954 534 635 2.42E-28 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 4.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 4.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 4.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 4.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 4.1E-52 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PANTHER PTHR11451 6 635 0.0 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 PANTHER PTHR11451:SF31 6 635 0.0 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 SMART SM00863 173 222 3.0E-20 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.980.10 70 133 4.7E-38 T 22-04-2016 TMO_RS02700 4b372ca9022542b7b9911e210c01686d 662 Gene3D G3DSA:3.30.980.10 191 227 4.7E-38 T 22-04-2016 TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 262 5.4E-66 T 22-04-2016 TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 SUPERFAMILY SSF51735 13 263 4.24E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PANTHER PTHR24321:SF6 14 263 1.3E-52 T 22-04-2016 TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PANTHER PTHR24321 14 263 1.3E-52 T 22-04-2016 TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 4.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 4.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 3.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01125 e80d42be1e8aa5c9894953ab8ca94ff6 265 Gene3D G3DSA:3.40.50.720 7 263 2.7E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 SUPERFAMILY SSF50156 110 205 8.28E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 SMART SM00228 117 196 2.9E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 140 364 4.0E-51 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 PANTHER PTHR22939 140 366 2.7E-69 T 22-04-2016 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 Pfam PF02163 Peptidase family M50 14 352 9.1E-78 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 PANTHER PTHR22939:SF78 140 366 2.7E-69 T 22-04-2016 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 Pfam PF13180 PDZ domain 138 202 1.3E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS08920 ef5d565a28b950f2b5eb2093d7b75231 375 Gene3D G3DSA:2.30.42.10 107 206 2.2E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Gene3D G3DSA:3.30.420.40 268 511 1.6E-88 T 22-04-2016 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 SUPERFAMILY SSF53067 21 269 1.48E-88 T 22-04-2016 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 20 266 1.1E-70 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 SUPERFAMILY SSF53067 269 512 1.77E-74 T 22-04-2016 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Gene3D G3DSA:3.30.420.40 18 267 3.4E-95 T 22-04-2016 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 PANTHER PTHR10196:SF44 1 509 4.5E-268 T 22-04-2016 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 276 467 6.1E-52 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 20 511 1.6E-201 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 PIRSF PIRSF000538 18 513 5.7E-163 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 Hamap MF_00186 Glycerol kinase [glpK]. 18 514 52.933 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 376 396 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS02280 cb0b465b8541d8ac6d4d4dbc683fc4c8 514 PANTHER PTHR10196 1 509 4.5E-268 T 22-04-2016 TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 9 148 2.8E-31 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 11 149 5.0E-41 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 Pfam PF13242 HAD-hyrolase-like 104 171 2.2E-10 T 22-04-2016 TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 SUPERFAMILY SSF56784 5 176 4.13E-44 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 PIRSF PIRSF004682 1 177 1.2E-52 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 Gene3D G3DSA:3.40.50.1000 4 175 4.2E-52 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 PANTHER PTHR23133:SF3 7 178 6.0E-42 T 22-04-2016 TMO_RS02470 03472dd3ff2ed16dd07fa5506fe2dd6d 183 PANTHER PTHR23133 7 178 6.0E-42 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 SUPERFAMILY SSF52540 69 293 2.31E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 SUPERFAMILY SSF54211 305 456 1.21E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 SUPERFAMILY SSF54211 257 271 1.21E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 431 2.2E-9 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PANTHER PTHR32472:SF10 1 490 4.5E-192 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 123 140 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 250 276 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 81 109 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 215 243 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 176 200 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PRINTS PR01874 DNA repair protein radA signature 324 347 3.5E-87 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 441 4.8E-173 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 PANTHER PTHR32472 1 490 4.5E-192 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 SMART SM00382 89 246 1.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 Pfam PF13481 AAA domain 80 224 8.2E-13 T 22-04-2016 TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 Gene3D G3DSA:3.30.230.10 288 454 9.3E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS09435 84cd676c7c53578bed8d31c9b9de0f17 490 Gene3D G3DSA:3.40.50.300 69 279 3.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PANTHER PTHR10906:SF2 22 447 1.5E-205 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 SUPERFAMILY SSF103491 16 428 2.09E-129 T 22-04-2016 IPR023201 SecY subunit domain TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PANTHER PTHR10906 22 447 1.5E-205 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 437 29.502 T 22-04-2016 IPR026593 Protein translocase subunit SecY TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 Pfam PF00344 SecY translocase 80 421 8.3E-117 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 432 4.9E-129 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 185 208 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 406 424 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 319 341 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 159 184 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 374 392 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PRINTS PR00303 Preprotein translocase SecY subunit signature 277 296 8.8E-95 T 22-04-2016 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 ProSitePatterns PS00756 Protein secY signature 2. 178 195 - T 22-04-2016 IPR030659 SecY conserved site TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 PIRSF PIRSF004557 10 445 9.3E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 TMO_RS13155 1149edb3895cf1e52fe369cd1ddb3b7f 447 Gene3D G3DSA:1.10.3370.10 18 441 2.3E-162 T 22-04-2016 IPR023201 SecY subunit domain TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 PANTHER PTHR18901 1 210 1.6E-40 T 22-04-2016 TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 Gene3D G3DSA:1.10.150.240 24 78 5.2E-5 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 SUPERFAMILY SSF56784 8 211 1.12E-52 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 185 1.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 191 1.4E-29 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 Gene3D G3DSA:3.40.50.1000 79 215 4.8E-39 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13105 3cf9c65f977f76d02c7ce1cbe48043bf 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 191 5.2E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:1.10.10.60 104 157 3.5E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 297 375 9.7E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Pfam PF12833 Helix-turn-helix domain 126 201 1.4E-8 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:3.30.160.70 196 294 4.4E-16 T 22-04-2016 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 PANTHER PTHR10815 178 408 1.2E-45 T 22-04-2016 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF53155 210 293 2.16E-10 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 346 352 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 PANTHER PTHR10815:SF9 178 408 1.2E-45 T 22-04-2016 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF46767 297 377 2.35E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 297 376 6.9E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:3.40.10.10 30 103 2.0E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Pfam PF02805 Metal binding domain of Ada 33 96 1.1E-28 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 SUPERFAMILY SSF57884 29 104 2.22E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 TMO_RS16045 930df01d083bf8c157c6bb03211998da 412 Gene3D G3DSA:1.10.10.10 297 380 8.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PANTHER PTHR24321:SF6 3 253 7.3E-59 T 22-04-2016 TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PANTHER PTHR24321 3 253 7.3E-59 T 22-04-2016 TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 Gene3D G3DSA:3.40.50.720 1 252 1.1E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 1.4E-70 T 22-04-2016 TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 SUPERFAMILY SSF51735 1 253 2.54E-84 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05600 3f4ed2f5d841a4266a3d798082a964de 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.8E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SMART SM00866 91 230 4.3E-15 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Gene3D G3DSA:1.10.10.10 4 66 5.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PANTHER PTHR11751 198 220 2.4E-15 T 22-04-2016 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PANTHER PTHR11751 6 73 2.4E-15 T 22-04-2016 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PANTHER PTHR11751:SF333 198 220 2.4E-15 T 22-04-2016 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PANTHER PTHR11751:SF333 6 73 2.4E-15 T 22-04-2016 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SUPERFAMILY SSF64288 58 233 5.81E-28 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SUPERFAMILY SSF46785 5 79 7.18E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 SMART SM00345 11 70 1.8E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Pfam PF07702 UTRA domain 91 229 2.0E-21 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 Gene3D G3DSA:3.40.1410.10 67 233 1.7E-24 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 4.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS17415 1e3c775a7c1ea3cd4ae623c13b9948d2 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 4.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 Gene3D G3DSA:3.90.850.10 120 406 1.6E-98 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 123 410 2.9E-54 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 7 414 1.7E-140 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 SUPERFAMILY SSF56529 120 412 8.37E-87 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820:SF1 287 414 3.0E-145 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820:SF1 2 90 3.0E-145 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820:SF1 117 271 3.0E-145 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 Pfam PF09298 Fumarylacetoacetase N-terminal 22 117 1.5E-22 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 Gene3D G3DSA:2.30.30.230 7 119 1.2E-31 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820 287 414 3.0E-145 T 22-04-2016 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820 2 90 3.0E-145 T 22-04-2016 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 PANTHER PTHR11820 117 271 3.0E-145 T 22-04-2016 TMO_RS11600 31768f107351e6a45dc98473a813a04a 418 SUPERFAMILY SSF63433 6 117 9.81E-31 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 Pfam PF00743 Flavin-binding monooxygenase-like 18 437 1.9E-76 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 Gene3D G3DSA:3.50.50.60 316 442 1.2E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PIRSF PIRSF000332 16 443 5.3E-83 T 22-04-2016 IPR012143 Dimethylaniline monooxygenase, N-oxide-forming GO:0004499|GO:0050660|GO:0050661|GO:0055114 KEGG: 00982+1.14.13.8 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 SUPERFAMILY SSF51905 16 285 1.07E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 Gene3D G3DSA:3.50.50.60 158 223 1.2E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 Gene3D G3DSA:3.50.50.60 293 315 1.2E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PANTHER PTHR23023:SF55 17 441 1.0E-137 T 22-04-2016 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 Gene3D G3DSA:3.50.50.60 17 157 1.1E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 144 160 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 378 391 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 312 339 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 90 105 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 115 127 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 16 32 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 361 378 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 198 213 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PRINTS PR00370 Flavin-containing monooxygenase (FMO) signature 40 64 6.9E-41 T 22-04-2016 IPR000960 Flavin monooxygenase FMO GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 PANTHER PTHR23023 17 441 1.0E-137 T 22-04-2016 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 SUPERFAMILY SSF51905 186 216 3.88E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02655 ecdabbc3572dd95bca56399dae561091 448 SUPERFAMILY SSF51905 279 393 3.88E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 48 151 7.3E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 Pfam PF12770 CHAT domain 638 919 8.1E-58 T 22-04-2016 IPR024983 CHAT domain TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 199 324 1.08E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959 50 331 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959 647 698 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959 363 483 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959:SF135 50 331 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959:SF135 647 698 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 PANTHER PTHR19959:SF135 363 483 1.8E-23 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 Pfam PF13424 Tetratricopeptide repeat 159 227 4.9E-11 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 Pfam PF13424 Tetratricopeptide repeat 245 312 6.7E-12 T 22-04-2016 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 Gene3D G3DSA:1.25.40.10 53 326 1.8E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15655 d35e56faa0146cc34bf061622105898c 920 SUPERFAMILY SSF48452 118 229 6.25E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 326 389 9.42E-19 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 164 230 9.42E-19 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 267 293 9.42E-19 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 66 119 9.42E-19 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 SUPERFAMILY SSF52151 7 38 9.42E-19 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 5 547 5.7E-125 T 22-04-2016 IPR019894 Patatin-related protein TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 Pfam PF11856 Protein of unknown function (DUF3376) 560 724 6.2E-26 T 22-04-2016 IPR024282 Domain of unknown function DUF3376 TMO_RS10665 cd30849fbf7650b24882a67cf0afc798 774 Pfam PF01734 Patatin-like phospholipase 14 341 5.8E-14 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:3.30.300.30 522 641 2.7E-27 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 535 613 2.3E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 PANTHER PTHR24095:SF178 17 651 0.0 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:3.40.50.980 271 431 3.0E-27 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:2.30.38.10 444 519 1.6E-10 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF00501 AMP-binding enzyme 89 526 2.0E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 PANTHER PTHR24095 17 651 0.0 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 8 649 53.469 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 SUPERFAMILY SSF56801 19 645 2.22E-185 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Gene3D G3DSA:3.40.50.980 84 270 1.4E-43 T 22-04-2016 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 30 86 3.0E-22 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 TMO_RS00490 3ce8d6d933e0617d9f6a3bdeb99d2dd2 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 645 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 TMO_RS03425 4975783ae66dadffc25ae67716402193 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 336 1.3E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS03425 4975783ae66dadffc25ae67716402193 349 PANTHER PTHR32196:SF30 1 348 2.1E-73 T 22-04-2016 TMO_RS03425 4975783ae66dadffc25ae67716402193 349 PANTHER PTHR32196 1 348 2.1E-73 T 22-04-2016 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 Gene3D G3DSA:3.90.1150.10 302 438 1.6E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 435 4.1E-135 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 Gene3D G3DSA:3.40.640.10 18 300 5.4E-111 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 PANTHER PTHR11808:SF12 279 438 2.4E-209 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 PANTHER PTHR11808:SF12 18 249 2.4E-209 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 19 436 3.8E-176 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 PIRSF PIRSF001434 9 438 1.0E-122 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 SUPERFAMILY SSF53383 18 435 3.32E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 PANTHER PTHR11808 279 438 2.4E-209 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS09010 a9972b3fcf166b83ec8050a4f67de122 438 PANTHER PTHR11808 18 249 2.4E-209 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS00450 8b504e168efdf037044490d664b71953 348 Gene3D G3DSA:3.40.50.300 136 304 5.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00450 8b504e168efdf037044490d664b71953 348 Gene3D G3DSA:3.40.50.300 9 60 5.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00450 8b504e168efdf037044490d664b71953 348 Pfam PF13469 Sulfotransferase family 11 299 1.1E-13 T 22-04-2016 TMO_RS00450 8b504e168efdf037044490d664b71953 348 SUPERFAMILY SSF52540 9 62 3.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00450 8b504e168efdf037044490d664b71953 348 SUPERFAMILY SSF52540 141 197 3.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00450 8b504e168efdf037044490d664b71953 348 SUPERFAMILY SSF52540 240 347 3.8E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 PANTHER PTHR24220 286 327 6.9E-161 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 PANTHER PTHR24220 5 267 6.9E-161 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 PANTHER PTHR24220:SF151 286 327 6.9E-161 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 PANTHER PTHR24220:SF151 5 267 6.9E-161 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:2.40.50.100 370 376 1.5E-4 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:2.40.50.100 239 290 1.5E-4 T 22-04-2016 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:3.40.50.300 4 235 4.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 SMART SM00382 28 211 5.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 Pfam PF00005 ABC transporter 20 161 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 SUPERFAMILY SSF50331 236 383 1.73E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 SUPERFAMILY SSF52540 4 242 7.91E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16660 b68940385a67e3e5e49a0c2956f45407 385 Gene3D G3DSA:2.40.50.140 291 367 6.0E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.2E-46 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 243 2.6E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 PANTHER PTHR30435 1 261 1.5E-113 T 22-04-2016 TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 1.6E-25 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 PANTHER PTHR30435:SF19 1 261 1.5E-113 T 22-04-2016 TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 SUPERFAMILY SSF117143 92 222 1.96E-34 T 22-04-2016 TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 3 260 1.0E-106 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 TMO_RS05525 b11b8f2d338845b28f6be46a731a8b0b 261 Pfam PF00460 Flagella basal body rod protein 4 34 5.7E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:2.30.38.10 372 427 6.4E-11 T 22-04-2016 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 PANTHER PTHR24096 21 528 9.0E-105 T 22-04-2016 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 SUPERFAMILY SSF56801 21 527 1.11E-112 T 22-04-2016 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Pfam PF13193 AMP-binding enzyme C-terminal domain 443 518 2.7E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Pfam PF00501 AMP-binding enzyme 27 433 2.5E-73 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:3.40.50.980 200 362 7.7E-32 T 22-04-2016 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:3.40.50.980 24 199 2.4E-20 T 22-04-2016 TMO_RS12170 4065a61f58d36e8eda590ce4fc5f930a 586 Gene3D G3DSA:3.30.300.30 428 527 1.7E-24 T 22-04-2016 TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 PANTHER PTHR10072 1 109 1.0E-41 T 22-04-2016 TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 Gene3D G3DSA:2.60.300.12 3 98 6.2E-28 T 22-04-2016 IPR000361 FeS cluster biogenesis TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 SUPERFAMILY SSF89360 3 98 1.22E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 4 109 1.7E-32 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site TMO_RS07575 0f8f7205b32912c6ba1707c7dd4ceea7 110 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 104 2.7E-16 T 22-04-2016 IPR000361 FeS cluster biogenesis TMO_RS10055 7cfa74775e7bc8d2990ea1cc9d329954 138 Gene3D G3DSA:3.10.129.10 14 137 8.9E-38 T 22-04-2016 IPR029069 HotDog domain TMO_RS10055 7cfa74775e7bc8d2990ea1cc9d329954 138 PANTHER PTHR11049:SF5 14 137 2.9E-52 T 22-04-2016 TMO_RS10055 7cfa74775e7bc8d2990ea1cc9d329954 138 SUPERFAMILY SSF54637 14 138 2.82E-37 T 22-04-2016 IPR029069 HotDog domain TMO_RS10055 7cfa74775e7bc8d2990ea1cc9d329954 138 PANTHER PTHR11049 14 137 2.9E-52 T 22-04-2016 TMO_RS10055 7cfa74775e7bc8d2990ea1cc9d329954 138 Pfam PF03061 Thioesterase superfamily 33 101 3.3E-16 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 SMART SM00861 4 177 1.2E-55 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 SUPERFAMILY SSF52518 3 178 5.4E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 Gene3D G3DSA:3.40.50.970 2 192 2.0E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 PANTHER PTHR11624 4 324 3.8E-116 T 22-04-2016 IPR033247 Transketolase family TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 Pfam PF02780 Transketolase, C-terminal domain 195 313 6.6E-36 T 22-04-2016 IPR033248 Transketolase, C-terminal domain TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 SUPERFAMILY SSF52922 188 319 6.28E-37 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 Pfam PF02779 Transketolase, pyrimidine binding domain 4 175 9.0E-48 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS02830 a6ff75541d41bb092bfeb8a688c732a8 324 Gene3D G3DSA:3.40.50.920 193 321 8.3E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 SUPERFAMILY SSF53822 25 365 1.01E-96 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 328 343 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.8E-27 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PANTHER PTHR30483:SF20 10 364 1.8E-115 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 Gene3D G3DSA:3.40.50.2300 25 224 1.0E-71 T 22-04-2016 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 PANTHER PTHR30483 10 364 1.8E-115 T 22-04-2016 TMO_RS10290 b5922908391af1768dc7c887f827dc6e 366 Pfam PF13458 Periplasmic binding protein 26 362 3.4E-60 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 280 1.2E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF04545 Sigma-70, region 4 228 279 2.5E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF04542 Sigma-70 region 2 51 119 9.0E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Gene3D G3DSA:1.10.10.10 225 280 6.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Pfam PF00140 Sigma-70 factor, region 1.2 15 41 1.9E-8 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 13 280 9.4E-108 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 SUPERFAMILY SSF88946 10 119 1.73E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 266 277 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 75 88 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 232 244 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 251 266 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PRINTS PR00046 Major sigma-70 factor signature 99 107 2.7E-21 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 SUPERFAMILY SSF88659 188 281 1.33E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Gene3D G3DSA:1.10.601.10 14 117 1.7E-38 T 22-04-2016 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 PANTHER PTHR30376 1 290 7.2E-98 T 22-04-2016 TMO_RS03325 3d93fb391e407a3b8149672e30ef4580 315 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 283 48.345 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 TMO_RS17340 8e26ed97a179be72505d9784f5b40207 218 PANTHER PTHR11019 1 217 4.3E-30 T 22-04-2016 TMO_RS17340 8e26ed97a179be72505d9784f5b40207 218 Pfam PF01965 DJ-1/PfpI family 26 215 2.2E-13 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS17340 8e26ed97a179be72505d9784f5b40207 218 SUPERFAMILY SSF52317 2 218 7.98E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS17340 8e26ed97a179be72505d9784f5b40207 218 Gene3D G3DSA:3.40.50.880 1 218 5.6E-72 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS17340 8e26ed97a179be72505d9784f5b40207 218 PANTHER PTHR11019:SF97 1 217 4.3E-30 T 22-04-2016 TMO_RS12375 5da0584bd5374048d9655049f978f056 343 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 319 1.0E-99 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter TMO_RS12375 5da0584bd5374048d9655049f978f056 343 PANTHER PTHR18640 1 332 1.2E-95 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter TMO_RS12375 5da0584bd5374048d9655049f978f056 343 PIRSF PIRSF026166 1 335 3.8E-127 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 Pfam PF00005 ABC transporter 283 426 9.8E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 Pfam PF00005 ABC transporter 17 164 4.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 SUPERFAMILY SSF52540 265 486 2.66E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 PANTHER PTHR24220:SF388 3 386 9.3E-212 T 22-04-2016 TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 SUPERFAMILY SSF52540 5 228 2.35E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 PANTHER PTHR24220 3 386 9.3E-212 T 22-04-2016 TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 SMART SM00382 291 482 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 SMART SM00382 26 247 5.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 Gene3D G3DSA:3.40.50.300 6 230 7.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 Gene3D G3DSA:3.40.50.300 260 487 1.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17525 910457dcae9995cb1113e888f894ac01 912 Pfam PF12698 ABC-2 family transporter protein 564 903 3.5E-45 T 22-04-2016 TMO_RS15565 906c6b757eb35ac0ea15db56a07f6e34 240 PANTHER PTHR30133 3 231 1.0E-92 T 22-04-2016 TMO_RS15565 906c6b757eb35ac0ea15db56a07f6e34 240 Gene3D G3DSA:1.10.3720.10 11 222 4.9E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15565 906c6b757eb35ac0ea15db56a07f6e34 240 SUPERFAMILY SSF161098 9 208 3.53E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15565 906c6b757eb35ac0ea15db56a07f6e34 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 1.6E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS15565 906c6b757eb35ac0ea15db56a07f6e34 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 218 4.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 PANTHER PTHR10909 15 386 4.6E-154 T 22-04-2016 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:1.20.140.10 225 386 1.2E-53 T 22-04-2016 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 PANTHER PTHR10909:SF190 15 386 4.6E-154 T 22-04-2016 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:1.10.540.10 8 128 3.8E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 SUPERFAMILY SSF47203 237 386 6.44E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Gene3D G3DSA:2.40.110.10 129 224 2.6E-35 T 22-04-2016 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 126 9.2E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 SUPERFAMILY SSF56645 9 250 8.77E-77 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 2.5E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 3.8E-24 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS04920 213b6f47a2c7e6370e0dee86cf08295c 386 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS09350 572263ccaaa032ea1c01eba4f69cda7d 331 Pfam PF01032 FecCD transport family 16 325 1.4E-74 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS09350 572263ccaaa032ea1c01eba4f69cda7d 331 SUPERFAMILY SSF81345 7 325 1.07E-66 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS09350 572263ccaaa032ea1c01eba4f69cda7d 331 Gene3D G3DSA:1.10.3470.10 8 329 5.3E-87 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS09350 572263ccaaa032ea1c01eba4f69cda7d 331 PANTHER PTHR30472:SF3 12 331 2.4E-78 T 22-04-2016 TMO_RS09350 572263ccaaa032ea1c01eba4f69cda7d 331 PANTHER PTHR30472 12 331 2.4E-78 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 SMART SM01403 7 101 1.0E-60 T 22-04-2016 IPR027486 Ribosomal protein S10 domain TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 8.451479E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 8.451479E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 8.451479E-20 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.0E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 PANTHER PTHR11700 1 102 2.4E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 SUPERFAMILY SSF54999 6 102 1.05E-40 T 22-04-2016 IPR027486 Ribosomal protein S10 domain TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 Gene3D G3DSA:3.30.70.600 4 102 1.4E-46 T 22-04-2016 IPR027486 Ribosomal protein S10 domain TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 6.1E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain TMO_RS13260 b6642ac12a1c608d1adceb72b3b7996c 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.085 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 PANTHER PTHR39323 11 236 6.7E-35 T 22-04-2016 TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 Gene3D G3DSA:3.60.21.10 36 133 3.6E-6 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 PANTHER PTHR39323:SF1 11 236 6.7E-35 T 22-04-2016 TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 PIRSF PIRSF000887 12 236 2.0E-44 T 22-04-2016 IPR024173 Phosphoesterase, MJ0037 TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 SUPERFAMILY SSF56300 35 171 1.12E-11 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS10380 e17766b80cc8ca16bcc6f09a9f090462 239 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 13 215 2.4E-61 T 22-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 299 3.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 SUPERFAMILY SSF161098 94 281 2.09E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 Gene3D G3DSA:1.10.3720.10 91 297 1.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 PANTHER PTHR30465:SF10 16 301 1.4E-114 T 22-04-2016 TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 76 2.3E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS07140 fb7a49445ff6a199133fde766f177ffe 305 PANTHER PTHR30465 16 301 1.4E-114 T 22-04-2016 TMO_RS16645 fc4dd793998f9ffd73aefb0b9b024d88 442 PANTHER PTHR30061:SF7 1 438 2.0E-139 T 22-04-2016 TMO_RS16645 fc4dd793998f9ffd73aefb0b9b024d88 442 Gene3D G3DSA:3.40.190.10 148 359 4.3E-33 T 22-04-2016 TMO_RS16645 fc4dd793998f9ffd73aefb0b9b024d88 442 Pfam PF13416 Bacterial extracellular solute-binding protein 46 361 4.7E-35 T 22-04-2016 TMO_RS16645 fc4dd793998f9ffd73aefb0b9b024d88 442 SUPERFAMILY SSF53850 29 428 4.35E-66 T 22-04-2016 TMO_RS16645 fc4dd793998f9ffd73aefb0b9b024d88 442 PANTHER PTHR30061 1 438 2.0E-139 T 22-04-2016 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 SUPERFAMILY SSF46785 10 93 1.39E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 Pfam PF03466 LysR substrate binding domain 102 302 2.2E-29 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 PANTHER PTHR30537:SF26 7 303 1.7E-81 T 22-04-2016 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 SUPERFAMILY SSF53850 102 300 5.25E-29 T 22-04-2016 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:1.10.10.10 8 93 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:3.40.190.10 102 183 2.1E-26 T 22-04-2016 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 5.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 Gene3D G3DSA:3.40.190.10 184 271 4.8E-18 T 22-04-2016 TMO_RS13865 0229d0fdc16f8dffab5ac569c769de46 316 PANTHER PTHR30537 7 303 1.7E-81 T 22-04-2016 TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 SMART SM00855 21 165 2.8E-18 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 SUPERFAMILY SSF53254 21 197 2.57E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 PANTHER PTHR23029 21 173 8.0E-33 T 22-04-2016 TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 22 171 3.2E-31 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 Gene3D G3DSA:3.40.50.1240 21 196 1.5E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS09015 d13e085604cafa031a964fbbfc5803da 201 PANTHER PTHR23029:SF1 21 173 8.0E-33 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF47807 174 288 1.0E-28 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF56672 533 938 7.67E-148 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00475 10 265 6.1E-122 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.30.70.370 828 938 4.3E-63 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.30.70.370 673 721 4.3E-63 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PANTHER PTHR10133 9 285 0.0 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PANTHER PTHR10133 307 937 0.0 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00279 176 211 1.5E-14 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF88723 9 173 4.25E-53 T 22-04-2016 IPR029060 PIN domain-like TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.10.150.20 189 250 4.8E-26 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 ProSitePatterns PS00447 DNA polymerase family A signature. 764 783 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PANTHER PTHR10133:SF27 9 285 0.0 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PANTHER PTHR10133:SF27 307 937 0.0 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.40.50.1010 11 188 1.5E-68 T 22-04-2016 IPR029060 PIN domain-like TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 12 173 3.5E-56 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SUPERFAMILY SSF53098 319 526 5.22E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 268 3.5E-29 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:3.30.420.10 320 551 3.2E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF00476 DNA polymerase family A 560 935 2.0E-146 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Pfam PF01612 3'-5' exonuclease 321 526 2.2E-30 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.20.1060.10 552 672 8.3E-35 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 TIGRFAM TIGR00593 pola: DNA polymerase I 12 938 2.4E-282 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 Gene3D G3DSA:1.10.150.20 722 827 7.5E-32 T 22-04-2016 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00482 696 902 1.4E-115 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 753 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 665 687 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 688 703 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 710 733 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 885 898 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 855 871 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 801 812 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 823 834 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 789 2.6E-74 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS16185 c8ba3335655464aaaa76c8c4294158fc 938 SMART SM00474 321 527 4.1E-22 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF56059 102 319 4.24E-62 T 22-04-2016 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.30.470.20 188 322 1.7E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 SMART SM01209 101 292 2.4E-137 T 22-04-2016 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.90.600.10 327 422 2.1E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.0E-31 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.40.50.20 2 93 7.9E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 4.4E-81 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 PANTHER PTHR10520 1 422 1.5E-260 T 22-04-2016 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 4.8E-162 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 420 3.1E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF52440 1 101 9.78E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.756 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 SMART SM01210 326 422 3.6E-51 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 SUPERFAMILY SSF51246 325 422 3.71E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif TMO_RS14485 aa5905a320dc184b886612a8cff8dab2 423 Gene3D G3DSA:3.30.1490.20 119 187 8.4E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS15520 99d33b482588b62f53ca42b3954eb928 87 Pfam PF04995 Heme exporter protein D (CcmD) 14 55 4.0E-12 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 TMO_RS15520 99d33b482588b62f53ca42b3954eb928 87 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 11 54 3.1E-11 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 PANTHER PTHR13779 14 196 3.0E-77 T 22-04-2016 TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 PANTHER PTHR13779 219 295 3.0E-77 T 22-04-2016 TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 SUPERFAMILY SSF52540 48 201 3.9E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 Gene3D G3DSA:3.40.50.300 54 224 1.7E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 PANTHER PTHR13779:SF28 14 196 3.0E-77 T 22-04-2016 TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 PANTHER PTHR13779:SF28 219 295 3.0E-77 T 22-04-2016 TMO_RS07770 3e0c4dc779b572328fbb445e2461a587 297 Pfam PF05673 Protein of unknown function (DUF815) 37 287 1.1E-100 T 22-04-2016 IPR008533 Domain of unknown function DUF815 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 248 415 9.3E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 124 4.2E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 SUPERFAMILY SSF52540 2 161 3.87E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 251 271 1.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 321 339 1.1E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.30.300.20 431 508 3.8E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Hamap MF_00195 GTPase Der [der]. 1 509 36.841 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Pfam PF01926 50S ribosome-binding GTPase 4 120 2.7E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Pfam PF01926 50S ribosome-binding GTPase 250 368 8.1E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 SUPERFAMILY SSF52540 138 166 1.01E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09470 38ab511f632f1f934b05f53669197404 519 SUPERFAMILY SSF52540 246 513 1.01E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09470 38ab511f632f1f934b05f53669197404 519 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 505 5.9E-162 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.40.50.300 247 430 2.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Gene3D G3DSA:3.40.50.300 2 160 2.7E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PANTHER PTHR11649 1 168 1.5E-175 T 22-04-2016 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PANTHER PTHR11649 224 510 1.5E-175 T 22-04-2016 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PANTHER PTHR11649:SF68 1 168 1.5E-175 T 22-04-2016 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PANTHER PTHR11649:SF68 224 510 1.5E-175 T 22-04-2016 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 PIRSF PIRSF006485 1 514 3.0E-158 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 TMO_RS09470 38ab511f632f1f934b05f53669197404 519 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 426 506 5.1E-30 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 25 34 1.8E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 PRINTS PR00050 Cold shock protein signature 40 58 1.8E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.2E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 SMART SM00357 3 67 1.1E-23 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 PIRSF PIRSF002599 1 68 3.9E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 SUPERFAMILY SSF50249 1 66 5.57E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 Gene3D G3DSA:2.40.50.140 1 65 1.6E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08235 f40eb40d025b948b034b7ab6b1d5bd5f 68 PANTHER PTHR11544 1 68 1.1E-24 T 22-04-2016 TMO_RS04925 eb08824e00836359396c1d37a281e012 319 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 245 9.5E-31 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS04925 eb08824e00836359396c1d37a281e012 319 PIRSF PIRSF016184 1 287 4.6E-47 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS04925 eb08824e00836359396c1d37a281e012 319 Pfam PF02567 Phenazine biosynthesis-like protein 9 247 8.0E-46 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS04925 eb08824e00836359396c1d37a281e012 319 Gene3D G3DSA:3.10.310.10 4 129 1.0E-39 T 22-04-2016 TMO_RS04925 eb08824e00836359396c1d37a281e012 319 PANTHER PTHR13774:SF17 1 293 1.6E-76 T 22-04-2016 TMO_RS04925 eb08824e00836359396c1d37a281e012 319 SUPERFAMILY SSF54506 4 286 2.09E-64 T 22-04-2016 TMO_RS04925 eb08824e00836359396c1d37a281e012 319 PANTHER PTHR13774 1 293 1.6E-76 T 22-04-2016 TMO_RS04925 eb08824e00836359396c1d37a281e012 319 Gene3D G3DSA:3.10.310.10 144 275 2.4E-29 T 22-04-2016 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 PANTHER PTHR11680 21 429 4.4E-252 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 Pfam PF00464 Serine hydroxymethyltransferase 20 394 1.1E-178 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 Gene3D G3DSA:3.90.1150.10 293 430 7.7E-57 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 Gene3D G3DSA:3.40.640.10 46 292 1.9E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 PIRSF PIRSF000412 2 432 1.7E-171 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 17 430 53.306 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 231 247 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS09180 411cbb5b3c04ce509ce1b5d859a9aaee 432 SUPERFAMILY SSF53383 14 430 4.13E-183 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 SUPERFAMILY SSF102405 86 295 3.2E-35 T 22-04-2016 TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 PANTHER PTHR32039 18 374 5.3E-92 T 22-04-2016 TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 Gene3D G3DSA:3.40.50.450 118 264 1.3E-7 T 22-04-2016 TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 Pfam PF02481 DNA recombination-mediator protein A 76 285 3.3E-67 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 PANTHER PTHR32039:SF8 18 374 5.3E-92 T 22-04-2016 TMO_RS12845 3b57df53c65483a28f828cddb0dd053c 381 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 293 7.9E-61 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00990 Diguanylate cyclase, GGDEF domain 292 450 1.2E-50 T 22-04-2016 IPR000160 GGDEF domain TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Gene3D G3DSA:3.40.50.2300 4 130 5.6E-43 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Gene3D G3DSA:3.40.50.2300 152 284 1.5E-27 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Gene3D G3DSA:3.30.70.270 294 454 2.1E-58 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF55073 297 454 4.16E-52 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 451 2.3E-53 T 22-04-2016 IPR000160 GGDEF domain TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00072 Response regulator receiver domain 158 268 5.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 PANTHER PTHR26402 3 137 3.2E-40 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 PANTHER PTHR26402 400 414 3.2E-40 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 PANTHER PTHR26402:SF50 3 137 3.2E-40 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 PANTHER PTHR26402:SF50 400 414 3.2E-40 T 22-04-2016 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SMART SM00448 156 268 1.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SMART SM00448 3 116 1.4E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF52172 2 134 2.85E-41 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SUPERFAMILY SSF52172 152 287 3.42E-29 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS12885 a3a7c2be0026dd814645e3649a334635 458 SMART SM00267 282 455 3.2E-59 T 22-04-2016 IPR000160 GGDEF domain TMO_RS15030 3f3817a3d9fb4d722590ce1bc8199aac 128 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 32 91 6.3E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15030 3f3817a3d9fb4d722590ce1bc8199aac 128 PANTHER PTHR30432 16 120 4.3E-20 T 22-04-2016 TMO_RS15030 3f3817a3d9fb4d722590ce1bc8199aac 128 SUPERFAMILY SSF46785 14 112 6.22E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15030 3f3817a3d9fb4d722590ce1bc8199aac 128 Gene3D G3DSA:1.10.10.10 14 118 1.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 Gene3D G3DSA:3.40.30.10 12 82 1.3E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 PRINTS PR00160 Glutaredoxin signature 54 67 1.0E-5 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 PRINTS PR00160 Glutaredoxin signature 13 31 1.0E-5 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 PRINTS PR00160 Glutaredoxin signature 68 81 1.0E-5 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 Pfam PF07291 Methylamine utilisation protein MauE 123 241 6.3E-5 T 22-04-2016 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 UniPathway: UPA00895 TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 SUPERFAMILY SSF52833 6 82 1.09E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10965 1ff13badee1dd2c959abb268a3b95044 249 Pfam PF00462 Glutaredoxin 21 71 5.9E-7 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 SMART SM00382 46 232 8.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 SUPERFAMILY SSF52540 21 247 1.38E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 PANTHER PTHR24220 22 293 3.4E-132 T 22-04-2016 TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 PANTHER PTHR24220:SF533 22 293 3.4E-132 T 22-04-2016 TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 Gene3D G3DSA:3.40.50.300 19 251 7.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13790 14fed4709bd3bb487cecf46a29fa84bf 302 Pfam PF00005 ABC transporter 38 184 5.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 Gene3D G3DSA:1.20.1600.10 130 514 2.0E-42 T 22-04-2016 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 SUPERFAMILY SSF56954 118 516 2.75E-53 T 22-04-2016 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 PANTHER PTHR30026:SF3 133 516 8.5E-34 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 PANTHER PTHR30026 133 516 8.5E-34 T 22-04-2016 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 Pfam PF02321 Outer membrane efflux protein 343 505 1.4E-14 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS05360 69cbbf8d8c965913dab9e3c4046e4ec2 532 Pfam PF02321 Outer membrane efflux protein 129 311 9.1E-15 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 Gene3D G3DSA:3.90.1150.10 292 408 8.9E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 14 413 7.8E-177 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 SUPERFAMILY SSF53383 10 411 8.94E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 Gene3D G3DSA:3.40.640.10 43 291 4.6E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 Pfam PF00266 Aminotransferase class-V 32 402 9.4E-146 T 22-04-2016 IPR000192 Aminotransferase class V domain TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 PANTHER PTHR11601 13 413 1.3E-191 T 22-04-2016 TMO_RS00565 b93b54e60396e9bd7ad5505e2befa912 414 PANTHER PTHR11601:SF17 13 413 1.3E-191 T 22-04-2016 TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 432 4.2E-90 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 SUPERFAMILY SSF53850 28 511 6.38E-132 T 22-04-2016 TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 Gene3D G3DSA:3.10.105.10 287 482 2.7E-44 T 22-04-2016 TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 PIRSF PIRSF002741 3 508 1.8E-101 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 Gene3D G3DSA:3.40.190.10 137 286 4.0E-44 T 22-04-2016 TMO_RS13735 c6b5e938ac5b93ab1ec4980bea4a486a 512 PANTHER PTHR30290 1 504 1.6E-124 T 22-04-2016 TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 PANTHER PTHR22777 7 274 1.1E-76 T 22-04-2016 TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 SMART SM00116 64 113 4.0E-4 T 22-04-2016 IPR000644 CBS domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 SMART SM00116 126 174 8.7 T 22-04-2016 IPR000644 CBS domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 Gene3D G3DSA:3.10.580.10 41 181 2.6E-21 T 22-04-2016 TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 Pfam PF03471 Transporter associated domain 191 269 1.1E-18 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 SUPERFAMILY SSF56176 190 273 5.73E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 Pfam PF00571 CBS domain 132 173 1.7E-4 T 22-04-2016 IPR000644 CBS domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 Pfam PF00571 CBS domain 55 112 1.5E-7 T 22-04-2016 IPR000644 CBS domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 SMART SM01091 190 271 1.1E-22 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 SUPERFAMILY SSF54631 50 186 1.18E-32 T 22-04-2016 TMO_RS17800 d728721c1774bdf1829fb78c3d883899 278 Gene3D G3DSA:3.30.465.10 182 269 1.3E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 Gene3D G3DSA:1.10.287.130 239 304 1.6E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 SUPERFAMILY SSF47384 232 306 4.71E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PANTHER PTHR24423:SF474 1 10 4.7E-45 T 22-04-2016 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PANTHER PTHR24423:SF474 188 462 4.7E-45 T 22-04-2016 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 Gene3D G3DSA:3.30.565.10 316 461 3.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 4.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 4.0E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 461 9.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 Pfam PF08521 Two-component sensor kinase N-terminal 27 170 1.6E-32 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PANTHER PTHR24423 1 10 4.7E-45 T 22-04-2016 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 PANTHER PTHR24423 188 462 4.7E-45 T 22-04-2016 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 SUPERFAMILY SSF55874 300 462 8.12E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 303 1.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 SMART SM00388 246 311 2.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS01890 7e316ae4716922632fc1d5ddb4b1750a 470 SMART SM00387 357 464 6.3E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 PANTHER PTHR11360 13 406 8.6E-57 T 22-04-2016 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 PANTHER PTHR11360:SF115 13 406 8.6E-57 T 22-04-2016 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 ProSitePatterns PS00216 Sugar transport proteins signature 1. 209 225 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 Gene3D G3DSA:1.20.1250.20 18 203 2.6E-22 T 22-04-2016 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 Gene3D G3DSA:1.20.1250.20 226 410 6.0E-21 T 22-04-2016 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 Pfam PF07690 Major Facilitator Superfamily 25 328 3.0E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS04285 ef361e6463c632af44703ae025da6cdb 421 SUPERFAMILY SSF103473 9 412 7.46E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS16980 b40f68fe8cf080d7a4e4f678569a0972 268 SUPERFAMILY SSF51658 104 227 9.27E-7 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS16980 b40f68fe8cf080d7a4e4f678569a0972 268 Gene3D G3DSA:3.20.20.150 9 263 2.4E-32 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS16980 b40f68fe8cf080d7a4e4f678569a0972 268 TIGRFAM TIGR04159 methbact_MbnB: methanobactin biosynthesis cassette protein MbnB 19 109 8.6E-41 T 22-04-2016 IPR026431 Methanobactin biosynthesis cassette protein MbnB TMO_RS16980 b40f68fe8cf080d7a4e4f678569a0972 268 Pfam PF05114 Protein of unknown function (DUF692) 9 259 3.3E-27 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 PANTHER PTHR10434:SF8 41 194 1.0E-27 T 22-04-2016 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 SUPERFAMILY SSF69593 40 252 1.44E-29 T 22-04-2016 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 Gene3D G3DSA:3.40.1130.10 65 179 9.5E-9 T 22-04-2016 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 PANTHER PTHR10434 41 194 1.0E-27 T 22-04-2016 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 SMART SM00563 67 182 4.4E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 TMO_RS17780 363ced42d86e9636e73a47c68ea8d425 262 Pfam PF01553 Acyltransferase 62 177 1.4E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:3.40.50.980 200 362 8.7E-23 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Pfam PF00501 AMP-binding enzyme 30 451 1.5E-61 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Pfam PF00550 Phosphopantetheine attachment site 574 634 1.7E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 SUPERFAMILY SSF47336 569 642 4.71E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 534 4.2E-10 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:1.10.1200.10 569 637 1.9E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 SUPERFAMILY SSF53474 645 902 4.61E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 SUPERFAMILY SSF56801 21 547 1.57E-109 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:2.30.38.10 363 444 2.4E-18 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:3.30.300.30 445 545 3.8E-24 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:3.40.50.1820 840 906 2.9E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:3.40.50.1820 646 758 2.9E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 Gene3D G3DSA:3.40.50.980 25 199 1.8E-26 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 PANTHER PTHR24095 87 534 4.5E-98 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 PANTHER PTHR24095 27 68 4.5E-98 T 22-04-2016 TMO_RS29495 436ddd022abc0fe8144a84c6b34ae41a 914 SMART SM00823 Phosphopantetheine attachment site 571 640 0.0032 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 3.2E-39 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 SUPERFAMILY SSF53901 221 418 2.98E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 Gene3D G3DSA:3.40.47.10 269 417 5.6E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 415 3.8E-199 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 SMART SM00825 Beta-ketoacyl synthase 4 419 5.5E-17 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 PANTHER PTHR11712 1 415 7.3E-229 T 22-04-2016 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 SUPERFAMILY SSF53901 1 260 1.22E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 Gene3D G3DSA:3.40.47.10 1 266 4.2E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 1.3E-63 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 PIRSF PIRSF000447 1 419 8.5E-193 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 TMO_RS09370 778ac83a3f5bb8d9a8f678edfc576af8 419 PANTHER PTHR11712:SF273 1 415 7.3E-229 T 22-04-2016 TMO_RS00285 2fb81f42cb7848a175abd6f7b1fa936a 368 Pfam PF13362 Toprim domain 270 357 5.7E-11 T 22-04-2016 IPR006171 Toprim domain TMO_RS00285 2fb81f42cb7848a175abd6f7b1fa936a 368 Gene3D G3DSA:3.90.580.10 12 100 5.7E-4 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 TMO_RS00285 2fb81f42cb7848a175abd6f7b1fa936a 368 Gene3D G3DSA:3.40.1360.10 268 361 1.4E-5 T 22-04-2016 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF52540 143 386 3.17E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 PANTHER PTHR32071:SF33 4 482 7.8E-175 T 22-04-2016 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF46689 436 482 2.33E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:1.10.8.60 316 390 1.8E-21 T 22-04-2016 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:1.10.10.60 437 478 4.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 SMART SM00382 163 306 5.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF00072 Response regulator receiver domain 10 118 8.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 SUPERFAMILY SSF52172 10 187 1.07E-37 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:3.40.50.300 142 315 3.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Gene3D G3DSA:3.40.50.2300 9 124 4.1E-29 T 22-04-2016 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 PANTHER PTHR32071 4 482 7.8E-175 T 22-04-2016 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 SMART SM00448 8 118 8.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF00158 Sigma-54 interaction domain 143 310 5.4E-64 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS12685 9de0f3e9e176b14403e0a731f153f7f8 489 Pfam PF02954 Bacterial regulatory protein, Fis family 442 482 1.7E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS15020 362898a2d8c023bcc78a1dc83d3f87e0 244 SUPERFAMILY SSF161098 7 221 9.42E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15020 362898a2d8c023bcc78a1dc83d3f87e0 244 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 223 4.6E-60 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 TMO_RS15020 362898a2d8c023bcc78a1dc83d3f87e0 244 PANTHER PTHR30183 1 230 1.8E-70 T 22-04-2016 TMO_RS15020 362898a2d8c023bcc78a1dc83d3f87e0 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 227 6.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15020 362898a2d8c023bcc78a1dc83d3f87e0 244 Gene3D G3DSA:1.10.3720.10 12 229 2.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 SUPERFAMILY SSF54980 392 465 6.12E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Gene3D G3DSA:3.30.70.870 394 463 4.1E-11 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 146 9.8E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 526 4.0E-203 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Pfam PF00009 Elongation factor Tu GTP binding domain 11 276 1.1E-52 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 SUPERFAMILY SSF52540 7 277 1.22E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 513 4.4E-41 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PANTHER PTHR23115:SF69 1 182 2.0E-208 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 526 49.778 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PANTHER PTHR23115 1 182 2.0E-208 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Pfam PF03144 Elongation factor Tu domain 2 313 379 7.7E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Gene3D G3DSA:2.40.30.10 291 393 1.1E-20 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PANTHER PTHR23115:SF69 250 466 2.0E-208 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 Gene3D G3DSA:3.40.50.300 8 281 3.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 PANTHER PTHR23115 250 466 2.0E-208 T 22-04-2016 TMO_RS02860 2e16a732af8e563ee352aa7fd613174b 530 SUPERFAMILY SSF50447 260 392 5.42E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 Pfam PF09360 Iron-binding zinc finger CDGSH type 61 84 2.2E-5 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 Pfam PF09360 Iron-binding zinc finger CDGSH type 22 49 2.5E-10 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 SMART SM00704 17 54 4.4E-10 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 SMART SM00704 55 86 0.1 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 PANTHER PTHR13680:SF22 8 87 5.2E-30 T 22-04-2016 TMO_RS14075 20085cd4da4371ef3e831cda710d55f3 87 PANTHER PTHR13680 8 87 5.2E-30 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PANTHER PTHR30222 26 376 2.1E-154 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 Gene3D G3DSA:3.40.190.10 158 326 4.1E-70 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PANTHER PTHR30222:SF11 26 376 2.1E-154 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 SUPERFAMILY SSF53850 36 376 4.94E-100 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 Gene3D G3DSA:3.40.190.10 38 157 3.9E-19 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 Pfam PF13416 Bacterial extracellular solute-binding protein 54 342 1.0E-28 T 22-04-2016 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 135 151 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 226 245 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 321 347 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 79 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 180 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 102 115 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 189 208 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 58 6.3E-55 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS01490 dc5708a9114ef0dbd4011c9bde7a808d 379 PIRSF PIRSF019574 7 377 1.6E-133 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 64 1608 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 Gene3D G3DSA:3.40.50.720 954 1065 4.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 Gene3D G3DSA:3.40.50.720 1120 1192 4.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 Gene3D G3DSA:3.40.50.720 1540 1579 4.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606:SF1 211 568 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606:SF1 680 1109 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606:SF1 1 136 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606:SF1 1134 1379 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 SUPERFAMILY SSF51735 957 1059 1.61E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 SUPERFAMILY SSF51735 1095 1296 1.61E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 SUPERFAMILY SSF53223 780 968 2.88E-24 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PIRSF PIRSF036761 5 1613 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606 211 568 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606 680 1109 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606 1 136 0.0 T 22-04-2016 TMO_RS15735 6fb0b1b7fb9d3d1f1459b5658dd24e95 1613 PANTHER PTHR11606 1134 1379 0.0 T 22-04-2016 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 PANTHER PTHR11699:SF109 10 479 2.4E-255 T 22-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 Gene3D G3DSA:3.40.309.10 265 443 3.2E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 Gene3D G3DSA:3.40.605.10 7 264 3.4E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 PANTHER PTHR11699 10 479 2.4E-255 T 22-04-2016 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 Pfam PF00171 Aldehyde dehydrogenase family 25 476 6.3E-159 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS12775 efb275b9cc9746668c2bc8801727da1a 481 SUPERFAMILY SSF53720 6 478 1.44E-149 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS11285 c5aae7fff974bae843e33a2ecdb04327 88 Gene3D G3DSA:3.40.30.10 8 78 2.2E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS11285 c5aae7fff974bae843e33a2ecdb04327 88 SUPERFAMILY SSF52833 6 69 7.66E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS11285 c5aae7fff974bae843e33a2ecdb04327 88 PANTHER PTHR34386:SF3 1 87 4.0E-14 T 22-04-2016 TMO_RS11285 c5aae7fff974bae843e33a2ecdb04327 88 PANTHER PTHR34386 1 87 4.0E-14 T 22-04-2016 TMO_RS11285 c5aae7fff974bae843e33a2ecdb04327 88 Pfam PF00462 Glutaredoxin 9 66 2.0E-13 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Pfam PF01568 Molydopterin dinucleotide binding domain 646 753 5.8E-9 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 PANTHER PTHR11615 52 252 3.0E-201 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 PANTHER PTHR11615 271 776 3.0E-201 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:3.40.50.740 395 627 1.0E-48 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:3.40.50.740 110 182 1.0E-48 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 759 7.0E-282 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 PIRSF PIRSF000144 2 763 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:3.40.228.10 183 394 1.6E-49 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Pfam PF00384 Molybdopterin oxidoreductase 110 413 1.4E-27 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 Gene3D G3DSA:2.40.40.20 638 758 2.8E-8 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 SUPERFAMILY SSF53706 49 639 9.95E-125 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 PANTHER PTHR11615:SF114 52 252 3.0E-201 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 PANTHER PTHR11615:SF114 271 776 3.0E-201 T 22-04-2016 TMO_RS02210 b77cf014865c0f0e1e916aeb3a9bc206 776 SUPERFAMILY SSF50692 638 759 7.23E-18 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 Gene3D G3DSA:1.20.200.10 202 508 5.9E-125 T 22-04-2016 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 SUPERFAMILY SSF48557 3 504 8.63E-183 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 PANTHER PTHR10362 1 513 1.4E-225 T 22-04-2016 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 7 509 43.043 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 Gene3D G3DSA:1.10.275.10 3 201 2.3E-65 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 9 509 2.5E-202 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 Pfam PF00221 Aromatic amino acid lyase 17 475 2.6E-179 T 22-04-2016 IPR001106 Aromatic amino acid lyase TMO_RS11800 f77600623d0c8829ab3d4c36a2b54192 518 PANTHER PTHR10362:SF7 1 513 1.4E-225 T 22-04-2016 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 SUPERFAMILY SSF90123 23 335 2.22E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 PANTHER PTHR24221:SF248 19 595 6.9E-190 T 22-04-2016 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 Gene3D G3DSA:3.40.50.300 350 575 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 Pfam PF00664 ABC transporter transmembrane region 39 294 3.0E-21 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 18 578 2.7E-230 T 22-04-2016 IPR017750 ATPase, type I secretion system TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 Pfam PF00005 ABC transporter 370 516 2.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 SUPERFAMILY SSF52540 341 574 3.97E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 SMART SM00382 376 562 4.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 Gene3D G3DSA:1.20.1560.10 23 331 5.1E-46 T 22-04-2016 TMO_RS05365 d49e6abf051183086ea6471ab8fb8b96 603 PANTHER PTHR24221 19 595 6.9E-190 T 22-04-2016 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 Gene3D G3DSA:3.30.70.1230 248 427 9.0E-24 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 SUPERFAMILY SSF55073 239 427 2.67E-38 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 248 420 2.2E-11 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 PANTHER PTHR11920:SF348 238 451 3.7E-41 T 22-04-2016 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 PANTHER PTHR11920:SF348 99 112 3.7E-41 T 22-04-2016 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 PANTHER PTHR11920 238 451 3.7E-41 T 22-04-2016 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 PANTHER PTHR11920 99 112 3.7E-41 T 22-04-2016 TMO_RS29575 d99f4eb5a3fbb80da323b149311e47b7 781 SMART SM00044 211 417 0.0068 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.25.40.80 234 317 1.1E-12 T 22-04-2016 TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.25.40.80 153 164 1.1E-12 T 22-04-2016 TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 6 234 1.5E-72 T 22-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 Gene3D G3DSA:1.10.579.10 318 418 2.4E-5 T 22-04-2016 TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 PANTHER PTHR38657:SF1 1 518 1.2E-208 T 22-04-2016 TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 SUPERFAMILY SSF48173 235 500 3.79E-59 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain TMO_RS13425 790820a28259fb521a4adb643597fdcc 538 PANTHER PTHR38657 1 518 1.2E-208 T 22-04-2016 TMO_RS16535 6166d52dbad3c46370fc40e918dc1ae9 391 Pfam PF07690 Major Facilitator Superfamily 20 358 4.8E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS16535 6166d52dbad3c46370fc40e918dc1ae9 391 Gene3D G3DSA:1.20.1250.20 198 385 5.6E-9 T 22-04-2016 TMO_RS16535 6166d52dbad3c46370fc40e918dc1ae9 391 Gene3D G3DSA:1.20.1250.20 2 183 5.0E-6 T 22-04-2016 TMO_RS16535 6166d52dbad3c46370fc40e918dc1ae9 391 PANTHER PTHR12778 1 323 1.1E-35 T 22-04-2016 TMO_RS16535 6166d52dbad3c46370fc40e918dc1ae9 391 SUPERFAMILY SSF103473 2 385 2.75E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 SUPERFAMILY SSF56645 4 242 3.14E-91 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:1.10.540.10 6 120 8.3E-41 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 SUPERFAMILY SSF47203 229 381 2.09E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 8.3E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:2.40.110.10 122 220 2.1E-42 T 22-04-2016 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 6.1E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 PANTHER PTHR10909:SF190 1 383 2.1E-193 T 22-04-2016 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 PANTHER PTHR10909 1 383 2.1E-193 T 22-04-2016 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 3.9E-39 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03535 4515ca249e96193caca5a84dc79f59e2 383 Gene3D G3DSA:1.20.140.10 221 381 2.3E-57 T 22-04-2016 TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 SMART SM00382 35 227 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 PANTHER PTHR24220 8 237 8.4E-76 T 22-04-2016 TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 Pfam PF00005 ABC transporter 26 179 2.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 SUPERFAMILY SSF52540 6 236 2.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15105 8ba48c4bad14ea906735a59ac0c8dd00 244 Gene3D G3DSA:3.40.50.300 5 237 2.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 SUPERFAMILY SSF48498 101 213 2.87E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 2.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 2.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 PANTHER PTHR30328 1 184 1.9E-23 T 22-04-2016 TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 SUPERFAMILY SSF46689 17 95 3.13E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29540 0cf4bb3bf31a706b946bcac28cfc448d 233 Gene3D G3DSA:1.10.357.10 16 195 9.2E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 PANTHER PTHR33797 1 143 2.2E-55 T 22-04-2016 TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 Pfam PF02566 OsmC-like protein 43 138 2.6E-21 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 Gene3D G3DSA:3.30.300.20 3 141 7.6E-52 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 SUPERFAMILY SSF82784 1 141 7.46E-40 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 4.8E-61 T 22-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 TMO_RS12185 a402af56f6d417718c525fcf2bde8aaf 143 PANTHER PTHR33797:SF1 1 143 2.2E-55 T 22-04-2016 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 SUPERFAMILY SSF56176 11 225 1.59E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.465.10 104 225 1.5E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 Pfam PF01565 FAD binding domain 49 185 2.1E-35 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 PANTHER PTHR11748:SF76 1 477 1.7E-186 T 22-04-2016 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 473 1.2E-52 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 PANTHER PTHR11748 1 477 1.7E-186 T 22-04-2016 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 SUPERFAMILY SSF55103 228 475 2.45E-59 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:1.10.45.10 434 473 3.7E-11 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 TMO_RS11790 dfa60d3754e510481ba77c3f88a1df4b 477 Gene3D G3DSA:3.30.43.10 9 103 2.9E-22 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 TMO_RS13720 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 PANTHER PTHR10509 44 211 9.1E-57 T 22-04-2016 TMO_RS13720 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 SUPERFAMILY SSF53335 37 225 9.82E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13720 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 Pfam PF01596 O-methyltransferase 37 224 4.6E-38 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 TMO_RS13720 3b7ba45517e6bc3e02f4cd6cb5c10af2 229 Gene3D G3DSA:3.40.50.150 9 226 6.6E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 SUPERFAMILY SSF52540 447 696 2.22E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 SUPERFAMILY SSF53335 120 309 7.19E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 Gene3D G3DSA:3.40.50.150 106 258 5.3E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 Pfam PF13871 C-terminal domain on Strawberry notch homologue 911 1168 1.3E-86 T 22-04-2016 IPR026937 Strawberry notch, helicase C domain TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 Pfam PF13872 P-loop containing NTP hydrolase pore-1 415 740 2.5E-120 T 22-04-2016 TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 PANTHER PTHR12706 218 471 2.8E-286 T 22-04-2016 IPR026741 Protein strawberry notch GO:0006355 TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 PANTHER PTHR12706 494 1357 2.8E-286 T 22-04-2016 IPR026741 Protein strawberry notch GO:0006355 TMO_RS11190 670330c2dbf277d19877dc152aaadb62 1447 Gene3D G3DSA:3.40.50.300 496 657 1.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Pfam PF00122 E1-E2 ATPase 94 327 3.3E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:1.20.1110.10 616 906 9.8E-103 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:1.20.1110.10 68 120 9.8E-103 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:2.70.150.10 32 67 3.6E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:2.70.150.10 121 236 3.6E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Pfam PF00690 Cation transporter/ATPase, N-terminus 16 83 3.4E-15 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SMART SM00831 15 88 5.2E-27 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 679 704 5.2E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 504 522 5.2E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 619 635 5.2E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 647 663 5.2E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Gene3D G3DSA:3.40.1110.10 326 553 8.4E-50 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81660 343 550 1.01E-43 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 683 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 173 187 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 647 666 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 557 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 568 578 5.8E-43 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PANTHER PTHR24093 800 911 4.7E-289 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 PANTHER PTHR24093 16 783 4.7E-289 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 737 1.3E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 357 5.4E-43 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81665 236 330 2.09E-115 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81665 15 126 2.09E-115 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81665 697 908 2.09E-115 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF56784 501 750 1.93E-63 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF56784 334 354 1.93E-63 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Pfam PF00689 Cation transporting ATPase, C-terminus 732 904 1.3E-35 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal TMO_RS13700 12592f6a6e275af892e327d45950067f 912 SUPERFAMILY SSF81653 126 235 1.83E-29 T 22-04-2016 TMO_RS13700 12592f6a6e275af892e327d45950067f 912 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 661 2.1E-21 T 22-04-2016 TMO_RS13760 1bba424869be1525188a43021dfc38cf 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 241 6.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13760 1bba424869be1525188a43021dfc38cf 269 PANTHER PTHR30151:SF8 1 241 2.5E-61 T 22-04-2016 TMO_RS13760 1bba424869be1525188a43021dfc38cf 269 SUPERFAMILY SSF161098 45 233 1.57E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13760 1bba424869be1525188a43021dfc38cf 269 Gene3D G3DSA:1.10.3720.10 46 239 4.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13760 1bba424869be1525188a43021dfc38cf 269 PANTHER PTHR30151 1 241 2.5E-61 T 22-04-2016 TMO_RS29410 cceacb3dfa6c09b57d44ca5dab9091e1 116 Pfam PF11804 Protein of unknown function (DUF3325) 5 103 1.0E-20 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 PANTHER PTHR11082 10 319 2.1E-107 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 SUPERFAMILY SSF51395 13 319 5.49E-81 T 22-04-2016 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 14 319 1.7E-97 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 Gene3D G3DSA:3.20.20.70 13 248 8.5E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 Pfam PF01207 Dihydrouridine synthase (Dus) 17 317 1.4E-91 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 PIRSF PIRSF006621 4 327 2.8E-94 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 PANTHER PTHR11082:SF25 10 319 2.1E-107 T 22-04-2016 TMO_RS08575 9003fcfcd88480b50ab02b790264799a 332 Gene3D G3DSA:1.10.1200.80 260 319 2.3E-10 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922 33 76 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 Pfam PF07722 Peptidase C26 12 230 1.9E-70 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922:SF18 163 251 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922:SF18 33 76 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922:SF18 92 147 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922 92 147 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 PANTHER PTHR11922 163 251 1.8E-50 T 22-04-2016 TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 SUPERFAMILY SSF52317 36 251 1.25E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS15840 5d269a8778fa5bbf20abe05d60935b46 261 Gene3D G3DSA:3.40.50.880 10 253 1.6E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 PANTHER PTHR24220 9 264 1.4E-96 T 22-04-2016 TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 Pfam PF00005 ABC transporter 28 186 2.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 PANTHER PTHR24220:SF442 9 264 1.4E-96 T 22-04-2016 TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 SUPERFAMILY SSF52540 7 243 5.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 Gene3D G3DSA:3.40.50.300 7 257 3.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07145 79bd7b019580ad73f4988cb296f741e6 282 SMART SM00382 36 235 8.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 PANTHER PTHR11986:SF87 23 438 3.1E-218 T 22-04-2016 TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 Gene3D G3DSA:3.40.640.10 67 318 4.1E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 Pfam PF00202 Aminotransferase class-III 32 433 2.2E-92 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 SUPERFAMILY SSF53383 14 436 4.34E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 Gene3D G3DSA:3.90.1150.10 319 437 9.2E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS09040 0d4f622f1112e410d12c5d64fa433420 440 PANTHER PTHR11986 23 438 3.1E-218 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 Pfam PF13452 N-terminal half of MaoC dehydratase 5 139 2.4E-38 T 22-04-2016 TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 PIRSF PIRSF018072 1 151 8.5E-40 T 22-04-2016 IPR016709 Uncharacterised protein family UPF0336 TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 Gene3D G3DSA:3.10.129.10 2 148 4.8E-30 T 22-04-2016 IPR029069 HotDog domain TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 SUPERFAMILY SSF54637 6 148 1.37E-33 T 22-04-2016 IPR029069 HotDog domain TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 PANTHER PTHR13078:SF52 4 148 4.0E-15 T 22-04-2016 TMO_RS04905 c65fb9f58bc47210a3e50a74dae4f41a 155 PANTHER PTHR13078 4 148 4.0E-15 T 22-04-2016 TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 Pfam PF00381 PTS HPr component phosphorylation site 13 91 4.6E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 SUPERFAMILY SSF55594 13 98 5.23E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 PANTHER PTHR33705:SF2 11 99 8.7E-39 T 22-04-2016 TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 Gene3D G3DSA:3.30.1340.10 13 97 3.0E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 12 91 6.3E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 23 39 2.0E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 63 80 2.0E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 PRINTS PR00107 Phosphocarrier protein signature 48 63 2.0E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 23 30 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 PANTHER PTHR33705 11 99 8.7E-39 T 22-04-2016 TMO_RS00885 e7e624a83119e3bdb122ad428a162a19 99 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 49 64 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site TMO_RS09535 94fc41ae284dd56eec84f9a1e91812cc 324 PANTHER PTHR33693 144 265 1.7E-35 T 22-04-2016 TMO_RS09535 94fc41ae284dd56eec84f9a1e91812cc 324 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 7 238 4.2E-61 T 22-04-2016 IPR023875 DNA metabolism protein, putative TMO_RS09535 94fc41ae284dd56eec84f9a1e91812cc 324 PANTHER PTHR33693:SF3 144 265 1.7E-35 T 22-04-2016 TMO_RS09535 94fc41ae284dd56eec84f9a1e91812cc 324 Pfam PF13566 Domain of unknown function (DUF4130 79 237 1.5E-40 T 22-04-2016 IPR025404 Domain of unknown function DUF4130 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 Gene3D G3DSA:1.10.10.60 275 313 1.4E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 SMART SM00342 226 311 5.0E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 PANTHER PTHR11019 70 319 5.6E-20 T 22-04-2016 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 SUPERFAMILY SSF46689 262 314 1.39E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 307 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 Gene3D G3DSA:1.10.10.60 212 249 2.4E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 Pfam PF14525 AraC-binding-like domain 19 192 4.4E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS28950 3fc38c14388f551d8f8b26c263c42177 321 Pfam PF12833 Helix-turn-helix domain 232 312 2.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF52374 4 192 1.21E-134 T 22-04-2016 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF52374 344 580 1.21E-134 T 22-04-2016 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 569 1.3E-205 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF46589 819 882 1.41E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF47323 583 834 9.16E-56 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PANTHER PTHR11946:SF5 2 797 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PANTHER PTHR11946:SF5 815 876 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 349 362 8.0E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 8.0E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 8.0E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 482 500 8.0E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PRINTS PR00986 Valyl-tRNA synthetase signature 451 472 8.0E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 865 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:1.10.287.380 825 884 2.9E-7 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PANTHER PTHR11946 2 797 0.0 T 22-04-2016 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 PANTHER PTHR11946 815 876 0.0 T 22-04-2016 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 819 882 1.9E-16 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 SUPERFAMILY SSF50677 191 345 2.62E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:3.40.50.620 5 193 5.4E-143 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:3.40.50.620 344 568 5.4E-143 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Pfam PF08264 Anticodon-binding domain of tRNA 612 761 5.2E-38 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:3.90.740.10 194 339 4.9E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Hamap MF_02004 Valine--tRNA ligase [valS]. 2 884 15.749 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 TMO_RS09585 a07bdc6fa72a80654d2323abbc818795 889 Gene3D G3DSA:1.10.730.10 571 752 1.5E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 SUPERFAMILY SSF46689 7 85 6.16E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 Gene3D G3DSA:1.10.10.60 9 58 4.0E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 SUPERFAMILY SSF48498 80 192 2.55E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 PANTHER PTHR30055 2 192 3.0E-28 T 22-04-2016 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 6.8E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03895 167bec39e4f74b723506574bdc4da15e 195 Gene3D G3DSA:1.10.357.10 59 194 6.3E-38 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 PANTHER PTHR11908:SF2 41 738 1.7E-145 T 22-04-2016 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 PIRSF PIRSF036389 3 736 4.6E-236 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 536 738 1.2E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 449 477 3.0E-4 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 327 342 3.0E-4 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 52 186 1.1E-10 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 325 562 4.1E-33 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 601 681 5.4E-12 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 52 184 5.3E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.30.365.10 343 447 7.8E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 SMART SM01008 221 299 4.2E-12 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 SUPERFAMILY SSF56003 24 250 5.93E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 SUPERFAMILY SSF56003 326 738 6.98E-107 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 Gene3D G3DSA:3.90.1170.50 193 268 3.8E-15 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS02415 4be5acd37de72334a61635ea48592b46 739 PANTHER PTHR11908 41 738 1.7E-145 T 22-04-2016 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 PIRSF PIRSF006603 24 465 7.3E-60 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 PANTHER PTHR11206 21 458 1.3E-97 T 22-04-2016 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 PANTHER PTHR11206:SF153 21 458 1.3E-97 T 22-04-2016 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 441 5.6E-71 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 Pfam PF01554 MatE 262 423 2.9E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS03820 8524c87b0deb5477aae79abe33b93c71 488 Pfam PF01554 MatE 34 193 1.7E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SUPERFAMILY SSF47384 196 276 4.32E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SMART SM00304 157 212 6.2E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 Pfam PF00672 HAMP domain 141 209 2.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SMART SM00388 213 276 3.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 Gene3D G3DSA:1.10.287.130 203 272 4.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 Gene3D G3DSA:3.30.565.10 282 438 1.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 436 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SMART SM00387 327 439 2.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SUPERFAMILY SSF55874 266 437 3.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 436 3.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PANTHER PTHR24423 26 80 2.5E-63 T 22-04-2016 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PANTHER PTHR24423 151 436 2.5E-63 T 22-04-2016 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 SUPERFAMILY SSF158472 157 210 1.07E-8 T 22-04-2016 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PANTHER PTHR24423:SF564 151 436 2.5E-63 T 22-04-2016 TMO_RS11855 925df3ab9d5ad5c6531c0d2cf0daec64 441 PANTHER PTHR24423:SF564 26 80 2.5E-63 T 22-04-2016 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF51730 188 535 3.92E-109 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF01619 Proline dehydrogenase 199 492 9.2E-92 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 PANTHER PTHR11699 544 1037 2.0E-155 T 22-04-2016 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 528 1033 2.1E-194 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF53720 572 1037 8.25E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 71 185 9.2E-44 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.40.605.10 572 824 1.3E-65 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 PANTHER PTHR11699:SF18 544 1037 2.0E-155 T 22-04-2016 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:1.10.2060.10 67 186 1.7E-47 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 SUPERFAMILY SSF81935 17 186 1.44E-57 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Pfam PF00171 Aldehyde dehydrogenase family 578 1033 2.0E-108 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 837 848 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 PIRSF PIRSF000197 3 1055 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.20.20.220 188 533 7.5E-103 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:3.40.309.10 825 1013 3.0E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS03095 67ada77703120cf46a17dd279659c1a3 1060 Gene3D G3DSA:1.20.5.550 18 63 1.0E-4 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 Gene3D G3DSA:1.10.10.10 249 307 1.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 PANTHER PTHR26402 250 307 1.0E-12 T 22-04-2016 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 Pfam PF00196 Bacterial regulatory proteins, luxR family 253 307 2.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 254 268 2.58E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 284 296 2.58E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 268 284 2.58E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 SMART SM00421 251 308 2.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 PANTHER PTHR26402:SF458 250 307 1.0E-12 T 22-04-2016 TMO_RS08985 e3f9b95e98ced88a5c246f9ade9faf04 311 SUPERFAMILY SSF46894 242 307 3.74E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 PANTHER PTHR24096 1 452 3.5E-69 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Pfam PF13193 AMP-binding enzyme C-terminal domain 370 449 3.7E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:2.30.38.10 306 355 5.6E-12 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:3.40.50.980 13 142 3.0E-9 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:3.40.50.980 143 289 3.2E-26 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 SUPERFAMILY SSF56801 6 451 3.4E-86 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Pfam PF00501 AMP-binding enzyme 125 361 3.9E-37 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 Gene3D G3DSA:3.30.300.30 356 450 2.1E-16 T 22-04-2016 TMO_RS03050 30b085a76b912b085d3c0e3b46086ab0 458 ProSitePatterns PS00455 Putative AMP-binding domain signature. 135 146 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 267 382 4.4E-29 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 Gene3D G3DSA:3.30.1220.10 256 382 1.6E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 Gene3D G3DSA:3.40.50.300 14 240 8.8E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 SMART SM00833 267 382 1.5E-49 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 SUPERFAMILY SSF52540 11 318 2.02E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 PANTHER PTHR13748 356 396 2.9E-196 T 22-04-2016 TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 PANTHER PTHR13748 10 340 2.9E-196 T 22-04-2016 TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 PANTHER PTHR13748:SF4 356 396 2.9E-196 T 22-04-2016 TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 PANTHER PTHR13748:SF4 10 340 2.9E-196 T 22-04-2016 TMO_RS02685 d47d102dcc9f97857b1714a3e195f7f8 406 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 16 220 1.7E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 3 159 36.551 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 5 153 5.3E-61 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 Gene3D G3DSA:3.30.70.640 5 158 2.9E-66 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 PANTHER PTHR22960 3 159 1.5E-91 T 22-04-2016 TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 SUPERFAMILY SSF55040 12 156 5.62E-59 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 TMO_RS08850 549c547ffa1bc691c6e5f016731c5b6f 165 Pfam PF01967 MoaC family 16 151 2.7E-53 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 520 8.1E-203 T 22-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF51735 97 281 1.3E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.30.1330.90 317 444 2.6E-43 T 22-04-2016 IPR029009 Allosteric substrate binding domain TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 PANTHER PTHR10996:SF20 1 356 7.8E-172 T 22-04-2016 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF55021 445 520 1.25E-14 T 22-04-2016 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.40.50.720 107 282 3.0E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.30.70.260 445 520 5.4E-17 T 22-04-2016 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF01842 ACT domain 453 515 5.5E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF143548 318 446 5.75E-36 T 22-04-2016 IPR029009 Allosteric substrate binding domain TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 1.2E-61 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 SUPERFAMILY SSF52283 1 135 6.05E-37 T 22-04-2016 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 312 1.2E-34 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 Gene3D G3DSA:3.40.50.720 1 106 3.7E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04625 c457f7355a8b450fc9d829a13d9a6a82 525 PANTHER PTHR10996 1 356 7.8E-172 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 16 468 43.203 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PANTHER PTHR11444 16 470 2.0E-225 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 17 469 9.0E-182 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.20.200.10 121 388 3.4E-107 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Pfam PF00206 Lyase 21 314 2.2E-79 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 1.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 289 305 1.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 245 272 1.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 1.6E-31 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.10.40.30 389 446 6.5E-26 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Gene3D G3DSA:1.10.275.10 16 120 1.6E-40 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 324 343 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 156 176 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 207 223 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 289 305 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 245 269 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PRINTS PR00145 Argininosuccinate lyase family signature 115 137 2.4E-68 T 22-04-2016 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 SUPERFAMILY SSF48557 17 468 6.44E-150 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 ProSitePatterns PS00163 Fumarate lyases signature. 289 298 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 PANTHER PTHR11444:SF3 16 470 2.0E-225 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS00660 5d1c8746b0ad9cf9db1992913598b3e9 471 Pfam PF14698 Argininosuccinate lyase C-terminal 377 445 4.7E-21 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.388 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 Pfam PF00468 Ribosomal protein L34 2 44 2.5E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.0E-21 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 3.0E-13 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 PANTHER PTHR14503 2 44 1.1E-18 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13690 8e1d76ddf0438214081cf02f4cecdb76 44 PANTHER PTHR14503:SF0 2 44 1.1E-18 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 SUPERFAMILY SSF56801 24 537 9.55E-148 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:3.30.300.30 436 536 3.2E-27 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 PANTHER PTHR24096 32 532 6.4E-146 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:3.40.50.980 32 197 2.3E-37 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Pfam PF00501 AMP-binding enzyme 39 441 4.9E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:2.30.38.10 356 435 1.6E-22 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Gene3D G3DSA:3.40.50.980 198 348 2.0E-37 T 22-04-2016 TMO_RS02625 ce5a55b32a71daf6114669d048cfcb6f 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 2.5E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS05475 21e200233bec7364cd0117768ef39125 300 Pfam PF00700 Bacterial flagellin C-terminal helical region 217 299 1.8E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05475 21e200233bec7364cd0117768ef39125 300 PANTHER PTHR30244 1 295 3.2E-27 T 22-04-2016 TMO_RS05475 21e200233bec7364cd0117768ef39125 300 Gene3D G3DSA:1.20.1330.10 53 251 2.7E-15 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05475 21e200233bec7364cd0117768ef39125 300 SUPERFAMILY SSF64518 1 300 1.96E-39 T 22-04-2016 TMO_RS05475 21e200233bec7364cd0117768ef39125 300 PANTHER PTHR30244:SF5 1 295 3.2E-27 T 22-04-2016 TMO_RS05475 21e200233bec7364cd0117768ef39125 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 139 2.7E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 Pfam PF02110 Hydroxyethylthiazole kinase family 15 256 6.9E-73 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PANTHER PTHR20857 5 269 2.2E-76 T 22-04-2016 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 Gene3D G3DSA:3.40.1190.20 5 265 3.6E-78 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 SUPERFAMILY SSF53613 11 258 8.94E-52 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 15 261 30.629 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 65 73 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 91 108 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 121 135 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 165 182 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 21 28 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 34 55 8.4E-35 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PIRSF PIRSF000513 7 267 9.6E-84 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16015 dd7a3f882b861b8a89aee4a93efbf413 269 PANTHER PTHR20857:SF19 5 269 2.2E-76 T 22-04-2016 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF56425 228 339 5.53E-31 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:1.20.58.100 424 492 1.5E-5 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF51905 13 225 1.62E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF51905 338 400 1.62E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:3.90.700.10 234 335 2.4E-26 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 Pfam PF00890 FAD binding domain 16 379 3.3E-74 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 4.2E-9 T 22-04-2016 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 364 4.2E-9 T 22-04-2016 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 PANTHER PTHR11632:SF27 8 491 1.5E-141 T 22-04-2016 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 PANTHER PTHR11632 8 491 1.5E-141 T 22-04-2016 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 SUPERFAMILY SSF46977 424 491 1.96E-8 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:3.50.50.60 336 395 3.6E-80 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09560 4e7375bc65571678d4b5d8c5efb7150e 505 Gene3D G3DSA:3.50.50.60 8 233 3.6E-80 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 PANTHER PTHR22769 5 148 9.2E-12 T 22-04-2016 TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 Pfam PF00293 NUDIX domain 5 136 4.0E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 Gene3D G3DSA:3.90.79.10 3 148 8.5E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 PRINTS PR00502 NUDIX hydrolase family signature 38 52 9.7E-9 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 PRINTS PR00502 NUDIX hydrolase family signature 52 67 9.7E-9 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS15305 ef4d1819e3bb54676e8dcddd328df25d 153 SUPERFAMILY SSF55811 3 146 2.44E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS06375 a570eaf63f5fbac36d631d1ab314f845 548 Gene3D G3DSA:3.30.750.60 74 117 4.6E-13 T 22-04-2016 IPR024429 Endosialidase, N-terminal extension domain TMO_RS06375 a570eaf63f5fbac36d631d1ab314f845 548 Pfam PF12708 Pectate lyase superfamily protein 72 287 9.4E-12 T 22-04-2016 IPR024535 Pectate lyase superfamily protein TMO_RS06375 a570eaf63f5fbac36d631d1ab314f845 548 SUPERFAMILY SSF51126 66 190 3.14E-26 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS06375 a570eaf63f5fbac36d631d1ab314f845 548 SUPERFAMILY SSF51126 218 407 3.14E-26 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS06375 a570eaf63f5fbac36d631d1ab314f845 548 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 280 318 1.2E-4 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SMART SM00388 152 216 1.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF55785 29 125 1.48E-8 T 22-04-2016 IPR000014 PAS domain TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Pfam PF00989 PAS fold 28 119 6.8E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:1.10.287.130 152 208 1.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 375 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF55874 219 374 9.56E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SUPERFAMILY SSF47384 148 211 5.69E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PANTHER PTHR24423 309 376 5.9E-75 T 22-04-2016 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PANTHER PTHR24423 28 289 5.9E-75 T 22-04-2016 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 1.7E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SMART SM00387 257 377 1.3E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 211 2.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 SMART SM00091 25 92 0.0076 T 22-04-2016 IPR000014 PAS domain TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:3.30.450.20 28 129 1.3E-14 T 22-04-2016 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PANTHER PTHR24423:SF520 309 376 5.9E-75 T 22-04-2016 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 PANTHER PTHR24423:SF520 28 289 5.9E-75 T 22-04-2016 TMO_RS08570 189c307af316e64c42703b40b274bcd1 380 Gene3D G3DSA:3.30.565.10 216 375 6.8E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Pfam PF13185 GAF domain 33 163 4.2E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF47831 206 324 4.18E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF52009 306 421 2.22E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.20.20.60 438 740 3.1E-84 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 189 736 2.8E-122 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:1.10.274.10 204 313 1.6E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 628 643 2.2E-16 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 681 693 2.2E-16 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 474 493 2.2E-16 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 645 660 2.2E-16 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.50.30.10 314 437 1.1E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 SMART SM00065 27 173 2.9E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PANTHER PTHR22931 209 731 2.2E-171 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 434 722 1.8E-84 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 PANTHER PTHR22931:SF23 209 731 2.2E-171 T 22-04-2016 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Pfam PF05524 PEP-utilising enzyme, N-terminal 189 307 2.3E-24 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF55781 13 163 1.33E-23 T 22-04-2016 IPR029016 GAF domain-like TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Pfam PF00391 PEP-utilising enzyme, mobile domain 333 404 4.9E-15 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 SUPERFAMILY SSF51621 431 723 1.07E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS01910 f6af606f800e70f476eda1a07e861445 756 Gene3D G3DSA:3.30.450.40 13 163 4.7E-40 T 22-04-2016 IPR029016 GAF domain-like TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 PANTHER PTHR23076 7 626 0.0 T 22-04-2016 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SUPERFAMILY SSF140990 409 606 2.75E-76 T 22-04-2016 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SMART SM00382 190 329 1.4E-25 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 5 627 37.939 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF06480 FtsH Extracellular 8 98 1.4E-12 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF01434 Peptidase family M41 388 598 5.0E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:3.40.50.300 149 337 3.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 5.5E-45 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 SUPERFAMILY SSF52540 148 397 1.99E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 599 3.6E-240 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 TMO_RS04585 df3cc12fba61c7d1bcd9aac50f2fd59f 647 Gene3D G3DSA:1.10.8.60 338 411 3.7E-28 T 22-04-2016 TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 PANTHER PTHR24220 8 238 4.7E-106 T 22-04-2016 TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 Pfam PF00005 ABC transporter 22 166 6.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 Gene3D G3DSA:3.40.50.300 2 234 1.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 SUPERFAMILY SSF52540 5 229 4.26E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 SMART SM00382 31 205 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS08255 d5428e16ff641d0f782a810edd5b07fc 239 PANTHER PTHR24220:SF568 8 238 4.7E-106 T 22-04-2016 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 Pfam PF01144 Coenzyme A transferase 7 199 7.1E-40 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 5.3E-97 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 SMART SM00882 6 201 7.0E-77 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 PANTHER PTHR13707 2 212 7.4E-131 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 Gene3D G3DSA:3.40.810.20 3 211 1.2E-91 T 22-04-2016 TMO_RS15915 9a9ea1ee5b1f014cd359e741410b709a 213 SUPERFAMILY SSF100950 3 210 7.07E-73 T 22-04-2016 TMO_RS17160 efd261dced315064f0361201334a5ea7 148 PANTHER PTHR40255 7 148 1.5E-56 T 22-04-2016 TMO_RS17160 efd261dced315064f0361201334a5ea7 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 148 1.1E-62 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 TMO_RS17160 efd261dced315064f0361201334a5ea7 148 PIRSF PIRSF004638 2 148 5.7E-62 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 TMO_RS17160 efd261dced315064f0361201334a5ea7 148 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 8 148 1.7E-52 T 22-04-2016 IPR014351 Conserved hypothetical protein CHP00701 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 Gene3D G3DSA:3.40.190.80 187 271 1.0E-25 T 22-04-2016 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 145 168 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 74 90 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 52 72 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PRINTS PR00377 Inositol monophosphatase superfamily signature 96 112 2.2E-23 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 Pfam PF00459 Inositol monophosphatase family 27 269 4.8E-47 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 SUPERFAMILY SSF56655 19 271 1.31E-66 T 22-04-2016 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 Gene3D G3DSA:3.30.540.10 23 166 5.3E-37 T 22-04-2016 TMO_RS14265 f967049c4aaf6e2963af53e4790ee8f7 288 PANTHER PTHR20854 14 287 2.0E-55 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS25960 4ecb9ac3c06276f6291c479e76c9cd49 198 SUPERFAMILY SSF53383 136 198 4.3E-8 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS25960 4ecb9ac3c06276f6291c479e76c9cd49 198 Gene3D G3DSA:3.90.1150.10 149 198 6.2E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS25960 4ecb9ac3c06276f6291c479e76c9cd49 198 PANTHER PTHR13693:SF53 129 198 5.9E-13 T 22-04-2016 TMO_RS25960 4ecb9ac3c06276f6291c479e76c9cd49 198 PANTHER PTHR13693 129 198 5.9E-13 T 22-04-2016 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 136 1.6E-27 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 255 6.2E-17 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.450.20 126 245 6.5E-20 T 22-04-2016 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00086 88 129 0.87 T 22-04-2016 IPR001610 PAC motif TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00086 206 248 0.0019 T 22-04-2016 IPR001610 PAC motif TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.565.10 322 493 2.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 495 3.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF00989 PAS fold 14 125 3.8E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55874 325 493 4.58E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:1.10.287.130 261 321 3.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF47384 254 336 9.81E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 335 8.1E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55785 23 137 2.75E-27 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Pfam PF13426 PAS domain 151 246 1.2E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00388 268 336 8.8E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 PANTHER PTHR24423 13 496 8.4E-105 T 22-04-2016 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00091 12 78 8.9E-12 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00091 134 200 2.2E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 Gene3D G3DSA:3.30.450.20 14 125 2.0E-22 T 22-04-2016 TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SMART SM00387 380 496 9.2E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02590 cc88b1ea3c34f32f76107a0005105ca9 502 SUPERFAMILY SSF55785 128 246 3.01E-20 T 22-04-2016 IPR000014 PAS domain TMO_RS10310 20da1b2db1d33e4162aa0695e8cb268d 441 PANTHER PTHR30482:SF9 108 427 1.8E-158 T 22-04-2016 TMO_RS10310 20da1b2db1d33e4162aa0695e8cb268d 441 Pfam PF02653 Branched-chain amino acid transport system / permease component 126 410 8.4E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS10310 20da1b2db1d33e4162aa0695e8cb268d 441 Pfam PF11862 Domain of unknown function (DUF3382) 19 113 8.4E-19 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal TMO_RS10310 20da1b2db1d33e4162aa0695e8cb268d 441 PANTHER PTHR30482 108 427 1.8E-158 T 22-04-2016 TMO_RS22275 68c8f1d400ab9ede5f230b9ca6d77d3f 107 PANTHER PTHR11645 4 107 1.2E-29 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS22275 68c8f1d400ab9ede5f230b9ca6d77d3f 107 SUPERFAMILY SSF51735 2 99 4.38E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS22275 68c8f1d400ab9ede5f230b9ca6d77d3f 107 Gene3D G3DSA:3.40.50.720 3 99 1.1E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS22275 68c8f1d400ab9ede5f230b9ca6d77d3f 107 PANTHER PTHR11645:SF0 4 107 1.2E-29 T 22-04-2016 TMO_RS01065 eccbceec0b339fcbc5b45e1241c7375b 93 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 23 89 4.8E-16 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 252 1.6E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 SUPERFAMILY SSF52096 10 254 1.36E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 PANTHER PTHR11941:SF45 1 240 4.8E-52 T 22-04-2016 TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 Gene3D G3DSA:3.90.226.10 4 250 1.4E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 117 137 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS12175 7ea53af1ab8da168ba51aa77758a4947 300 PANTHER PTHR11941 1 240 4.8E-52 T 22-04-2016 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 SUPERFAMILY SSF48498 80 174 5.56E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PANTHER PTHR30328 2 172 5.6E-28 T 22-04-2016 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PANTHER PTHR30328:SF4 2 172 5.6E-28 T 22-04-2016 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 8.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 8.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 Gene3D G3DSA:1.10.357.10 4 171 1.7E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 SUPERFAMILY SSF46689 3 76 4.44E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 8.2E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06215 a8b67c7ff36a23cfc541ed3aece5e0cc 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS14240 263c480d407b09d05780bfac512d9760 506 SUPERFAMILY SSF50475 3 328 3.1E-109 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 SUPERFAMILY SSF143968 329 493 4.58E-68 T 22-04-2016 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 PANTHER PTHR30108:SF1 1 500 2.8E-234 T 22-04-2016 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 Gene3D G3DSA:3.40.1670.10 343 460 3.7E-53 T 22-04-2016 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 Gene3D G3DSA:1.20.5.570 461 503 2.6E-16 T 22-04-2016 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 437 6.6E-161 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 PANTHER PTHR30108 1 500 2.8E-234 T 22-04-2016 TMO_RS14240 263c480d407b09d05780bfac512d9760 506 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 461 2.0E-151 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 SUPERFAMILY SSF55811 28 145 5.68E-12 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 Gene3D G3DSA:3.90.79.10 238 271 3.5E-13 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 Gene3D G3DSA:3.90.79.10 32 138 3.5E-13 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 SUPERFAMILY SSF46785 267 336 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 Gene3D G3DSA:1.10.10.10 272 337 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10345 4afb1c5c745c8f4891b1304b2875ea42 348 PIRSF PIRSF019423 12 348 7.2E-125 T 22-04-2016 IPR011213 Nicotinic acid mononucleotide biosynthesis protein TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 Gene3D G3DSA:2.40.33.20 182 254 5.7E-5 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 PANTHER PTHR14237 132 256 3.4E-13 T 22-04-2016 TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 SUPERFAMILY SSF50800 141 254 3.66E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 SUPERFAMILY SSF50800 4 60 3.66E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 PANTHER PTHR14237:SF3 132 256 3.4E-13 T 22-04-2016 TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 Pfam PF03473 MOSC domain 138 253 3.4E-12 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 TMO_RS01945 18f21e0b4376159cd3d19f140d6000b1 256 Pfam PF03476 MOSC N-terminal beta barrel domain 6 103 2.1E-8 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.930.10 204 498 7.3E-91 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 132 181 3.9E-16 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PANTHER PTHR11451:SF5 12 104 3.1E-219 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PANTHER PTHR11451:SF5 127 615 3.1E-219 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.980.10 11 70 5.3E-32 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.980.10 150 186 5.3E-32 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF55681 205 494 8.6E-81 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.30.54.20 71 149 3.9E-17 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PANTHER PTHR11451 12 104 3.1E-219 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PANTHER PTHR11451 127 615 3.1E-219 T 22-04-2016 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Gene3D G3DSA:3.40.50.800 499 610 1.2E-33 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 1.2E-38 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 326 349 1.2E-38 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 1.2E-38 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 293 321 1.2E-38 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 1.2E-38 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 287 497 5.1E-32 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF55186 11 202 2.35E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 SUPERFAMILY SSF52954 495 607 2.72E-30 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 7 609 30.658 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 Pfam PF03129 Anticodon binding domain 509 604 5.7E-21 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 SMART SM00863 132 181 1.3E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS03950 f019ef64d6d7f20eca9b9c3401882fd1 627 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 13 606 8.1E-183 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 386 44.1 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 Gene3D G3DSA:3.40.640.10 48 277 6.9E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 Gene3D G3DSA:3.90.1150.10 278 388 5.8E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 PANTHER PTHR11986:SF79 9 393 2.1E-171 T 22-04-2016 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 Pfam PF00202 Aminotransferase class-III 12 384 3.0E-117 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 PANTHER PTHR11986 9 393 2.1E-171 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 4.7E-140 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_RS00135 b79f0045edc4d7c323cd499ee003fe21 399 SUPERFAMILY SSF53383 4 386 2.82E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 SUPERFAMILY SSF52009 393 518 1.57E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:1.20.80.30 121 204 3.5E-16 T 22-04-2016 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:3.30.470.20 250 347 7.1E-29 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 PANTHER PTHR22931:SF9 36 522 2.0E-165 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Pfam PF00391 PEP-utilising enzyme, mobile domain 430 509 1.4E-19 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 310 361 1.7E-8 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 35 66 1.2E-4 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 78 293 2.4E-24 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:3.30.1490.20 206 249 6.2E-40 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:3.30.1490.20 30 120 6.2E-40 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:3.50.30.10 407 512 1.1E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 Gene3D G3DSA:1.10.189.10 348 406 7.6E-6 T 22-04-2016 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 456 467 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 PANTHER PTHR22931 36 522 2.0E-165 T 22-04-2016 TMO_RS08350 7ecb4fa5719d16a49b5b303dd7e959e8 537 SUPERFAMILY SSF56059 32 376 4.71E-105 T 22-04-2016 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 2.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 2.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 2.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 Pfam PF13463 Winged helix DNA-binding domain 60 119 2.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 SUPERFAMILY SSF46785 25 163 1.85E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 PANTHER PTHR33164 1 170 4.6E-24 T 22-04-2016 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 SMART SM00347 45 146 4.0E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14830 0b4f2d5130f0690922a1936ee79ad182 171 Gene3D G3DSA:1.10.10.10 24 163 4.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 PANTHER PTHR11473 26 238 2.1E-68 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 Gene3D G3DSA:1.10.800.10 11 270 4.5E-94 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 15 262 2.4E-104 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 123 134 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 217 236 1.1E-8 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 80 102 1.1E-8 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 185 203 1.1E-8 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 24 242 6.3E-44 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_RS03335 e8ace010917449fb5fc31b55266a4404 282 SUPERFAMILY SSF56534 11 270 6.15E-97 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SMART SM00863 166 208 9.8E-7 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SUPERFAMILY SSF55186 84 209 6.93E-24 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 PANTHER PTHR11777:SF17 6 207 5.8E-25 T 22-04-2016 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 SUPERFAMILY SSF50447 1 83 1.48E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Pfam PF01411 tRNA synthetases class II (A) 16 59 3.3E-5 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 PANTHER PTHR11777 6 207 5.8E-25 T 22-04-2016 TMO_RS02725 3b6e63ef9d79d5fe1d18d70a235fab8b 214 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 208 1.5E-6 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 Gene3D G3DSA:3.30.1370.70 1 90 2.5E-29 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 SUPERFAMILY SSF110836 1 90 1.18E-27 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 PIRSF PIRSF036773 1 181 5.1E-70 T 22-04-2016 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 PANTHER PTHR11178 1 181 5.0E-90 T 22-04-2016 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 88 2.0E-26 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 117 181 7.0E-25 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 PANTHER PTHR11178:SF1 1 181 5.0E-90 T 22-04-2016 IPR017065 NFU1 iron-sulfur cluster scaffold homologue GO:0016226 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 SMART SM00932 3 88 8.1E-40 T 22-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 SUPERFAMILY SSF117916 101 181 4.36E-28 T 22-04-2016 TMO_RS17725 7724dfb55fefc446fd4d4606dafdfabd 181 Pfam PF01106 NifU-like domain 113 178 4.2E-30 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 SUPERFAMILY SSF51419 22 252 1.01E-74 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 PIRSF PIRSF004848 20 260 1.3E-69 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 27 254 2.0E-58 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 Pfam PF01168 Alanine racemase, N-terminal domain 31 254 1.7E-22 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 Gene3D G3DSA:3.20.20.10 17 258 8.6E-89 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS16560 6ae31792a63c0e382cf17df44a92ae15 268 PANTHER PTHR10146 11 254 2.1E-87 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS12770 3f26516d708d7a0d205b9a8402a25490 270 PANTHER PTHR30193 12 270 1.4E-63 T 22-04-2016 TMO_RS12770 3f26516d708d7a0d205b9a8402a25490 270 Gene3D G3DSA:1.10.3720.10 14 260 1.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12770 3f26516d708d7a0d205b9a8402a25490 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 255 8.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12770 3f26516d708d7a0d205b9a8402a25490 270 SUPERFAMILY SSF161098 12 259 1.83E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12770 3f26516d708d7a0d205b9a8402a25490 270 PANTHER PTHR30193:SF20 12 270 1.4E-63 T 22-04-2016 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.9E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 1.9E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PRINTS PR01703 Manganese superoxide dismutase signature 70 83 1.9E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 194 1.6E-38 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PANTHER PTHR11404:SF8 1 199 1.9E-113 T 22-04-2016 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PIRSF PIRSF000349 1 199 1.8E-83 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 SUPERFAMILY SSF46609 1 88 3.27E-37 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 87 2.2E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 PANTHER PTHR11404 1 199 1.9E-113 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 Gene3D G3DSA:1.10.287.990 20 87 5.9E-25 T 22-04-2016 TMO_RS07795 0a9e311b1904ecf02ac5a19f3e6eafdc 199 SUPERFAMILY SSF54719 89 198 8.77E-46 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 Pfam PF00005 ABC transporter 24 183 1.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 SUPERFAMILY SSF52540 7 255 7.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 Gene3D G3DSA:3.40.50.300 6 253 2.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 255 4.1E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 PANTHER PTHR24220:SF358 9 107 2.5E-102 T 22-04-2016 TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 PANTHER PTHR24220:SF358 123 256 2.5E-102 T 22-04-2016 TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 SMART SM00382 32 233 2.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 PANTHER PTHR24220 9 107 2.5E-102 T 22-04-2016 TMO_RS08260 3e69278a99a061a47e8ecc9a9b21bbdd 279 PANTHER PTHR24220 123 256 2.5E-102 T 22-04-2016 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 SUPERFAMILY SSF48179 185 277 2.13E-14 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 PIRSF PIRSF000105 1 301 1.6E-63 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 Gene3D G3DSA:3.40.50.720 4 186 1.8E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 PANTHER PTHR23309 1 300 7.4E-88 T 22-04-2016 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 Gene3D G3DSA:1.10.1040.10 187 238 8.8E-10 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 251 2.0E-14 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 SUPERFAMILY SSF51735 1 182 8.58E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 31 2.3E-5 T 22-04-2016 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 275 2.3E-5 T 22-04-2016 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 181 3.4E-43 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS05715 b7a347356f1df4ae6f802177cc891ad1 313 PANTHER PTHR23309:SF17 1 300 7.4E-88 T 22-04-2016 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 Gene3D G3DSA:3.30.160.110 115 149 4.3E-11 T 22-04-2016 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 Pfam PF14824 Sirohaem biosynthesis protein central 121 147 1.2E-6 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 PANTHER PTHR35330 2 191 3.4E-18 T 22-04-2016 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 Gene3D G3DSA:3.40.50.720 3 112 1.4E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 SUPERFAMILY SSF51735 4 112 3.25E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 Pfam PF13241 Putative NAD(P)-binding 9 117 4.0E-8 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 5 168 1.7E-21 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS11745 1f91bfce088012c72c884bf2b531de5b 219 SUPERFAMILY SSF75615 116 175 6.41E-12 T 22-04-2016 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 Gene3D G3DSA:3.30.2110.10 22 201 9.0E-55 T 22-04-2016 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 PANTHER PTHR35863 9 383 6.1E-92 T 22-04-2016 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 SUPERFAMILY SSF111342 18 304 1.01E-77 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 27 337 7.2E-50 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 PIRSF PIRSF026782 16 381 3.4E-116 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 PANTHER PTHR35863:SF1 9 383 6.1E-92 T 22-04-2016 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 20 378 27.37 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13960 0349c63af4f624a07219b2759922f24e 383 Pfam PF01888 CbiD 20 287 9.7E-84 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 ProSitePatterns PS01218 TatC family signature. 168 187 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PANTHER PTHR30371:SF0 7 273 6.8E-99 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 235 1.1E-68 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PANTHER PTHR30371 7 273 6.8E-99 T 22-04-2016 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 254 18.991 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 240 2.4E-68 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 16 43 4.6E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 93 111 4.6E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 111 137 4.6E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS07735 7b17fb99687716844b32c606568e9bcc 277 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 168 196 4.6E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 TMO_RS02615 f4ea860669acdff71c4ef1e3413b0ab6 193 Gene3D G3DSA:3.40.109.10 8 191 1.5E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS02615 f4ea860669acdff71c4ef1e3413b0ab6 193 SUPERFAMILY SSF55469 9 192 6.41E-39 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS02615 f4ea860669acdff71c4ef1e3413b0ab6 193 Pfam PF00881 Nitroreductase family 15 157 7.4E-15 T 22-04-2016 IPR029479 Nitroreductase TMO_RS02615 f4ea860669acdff71c4ef1e3413b0ab6 193 PANTHER PTHR23026 9 192 7.4E-18 T 22-04-2016 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF55785 145 277 6.98E-25 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF13188 PAS domain 18 57 9.9E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 533 542 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 286 3.0E-19 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00091 16 82 0.033 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00091 160 227 4.1E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 406 421 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF55785 12 124 2.09E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.40.50.300 317 492 2.6E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 344 357 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 PANTHER PTHR32071 260 647 8.0E-147 T 22-04-2016 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF00989 PAS fold 163 276 1.8E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SMART SM00382 340 484 2.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:1.10.10.60 546 638 6.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 SUPERFAMILY SSF52540 319 557 2.56E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:1.10.8.60 493 545 2.4E-23 T 22-04-2016 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Pfam PF00158 Sigma-54 interaction domain 320 487 2.1E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.30.450.20 159 277 7.1E-28 T 22-04-2016 TMO_RS01645 a1825d6fd0393382cd2a83a81fae8d3f 647 Gene3D G3DSA:3.30.450.20 12 124 2.0E-10 T 22-04-2016 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 20 645 39.109 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 Gene3D G3DSA:3.50.50.60 22 240 1.1E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 386 409 - T 22-04-2016 IPR020595 MnmG-related, conserved site TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 Pfam PF13932 GidA associated domain 428 636 1.6E-53 T 22-04-2016 IPR026904 GidA associated domain 3 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 23 637 1.4E-227 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 SMART SM01228 567 638 1.2E-28 T 22-04-2016 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 PANTHER PTHR11806 23 642 0.0 T 22-04-2016 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 PANTHER PTHR11806:SF0 23 642 0.0 T 22-04-2016 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 Pfam PF01134 Glucose inhibited division protein A 23 413 3.1E-158 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 SUPERFAMILY SSF51905 112 278 7.73E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 SUPERFAMILY SSF51905 22 81 7.73E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 291 305 - T 22-04-2016 IPR020595 MnmG-related, conserved site TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 157 166 1.6E-6 T 22-04-2016 TMO_RS17205 bc2b2faa90a1b7d6df6ddad2011663fa 649 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 23 45 1.6E-6 T 22-04-2016 TMO_RS14040 7552fe8b485433c52d39f69c439ae9d6 524 SUPERFAMILY SSF55931 312 324 2.06E-19 T 22-04-2016 TMO_RS14040 7552fe8b485433c52d39f69c439ae9d6 524 SUPERFAMILY SSF55931 356 486 2.06E-19 T 22-04-2016 TMO_RS14040 7552fe8b485433c52d39f69c439ae9d6 524 SUPERFAMILY SSF55931 11 251 2.06E-19 T 22-04-2016 TMO_RS14040 7552fe8b485433c52d39f69c439ae9d6 524 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 77 214 3.9E-13 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 32 84 6.4E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 PANTHER PTHR30465 159 384 5.7E-160 T 22-04-2016 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 PANTHER PTHR30465 25 138 5.7E-160 T 22-04-2016 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 194 381 1.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 SUPERFAMILY SSF161098 171 370 4.41E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 Gene3D G3DSA:1.10.3720.10 167 380 1.8E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 PANTHER PTHR30465:SF33 159 384 5.7E-160 T 22-04-2016 TMO_RS10205 862252d86bc453bbf5c20cf1bebc59c9 384 PANTHER PTHR30465:SF33 25 138 5.7E-160 T 22-04-2016 TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 SUPERFAMILY SSF52283 1 170 9.35E-57 T 22-04-2016 TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 SMART SM01002 148 315 3.4E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 Gene3D G3DSA:3.40.50.1770 2 177 5.0E-69 T 22-04-2016 TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 139 3.3E-48 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 Gene3D G3DSA:3.50.50.60 178 196 2.6E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 PANTHER PTHR10160 1 378 5.5E-173 T 22-04-2016 TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 SUPERFAMILY SSF51735 139 306 1.76E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 372 4.4E-71 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 SMART SM01003 4 139 1.0E-72 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_RS04180 53e7933c8cefc295d3eb3355d778fcf1 379 Gene3D G3DSA:3.40.50.1770 197 372 7.4E-39 T 22-04-2016 TMO_RS16025 a3453026910a4ae25f9f8ce26d78dca4 181 PIRSF PIRSF033913 16 178 2.8E-27 T 22-04-2016 IPR024199 Uncharacterised conserved protein, DsbB-like TMO_RS16025 a3453026910a4ae25f9f8ce26d78dca4 181 Gene3D G3DSA:1.20.1550.10 24 171 2.5E-19 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain TMO_RS16025 a3453026910a4ae25f9f8ce26d78dca4 181 SUPERFAMILY SSF158442 26 170 2.75E-27 T 22-04-2016 TMO_RS16025 a3453026910a4ae25f9f8ce26d78dca4 181 Pfam PF02600 Disulfide bond formation protein DsbB 24 170 7.8E-28 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 Gene3D G3DSA:3.30.300.20 12 125 4.0E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 PANTHER PTHR33515 8 149 7.8E-33 T 22-04-2016 TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 ProSitePatterns PS01319 Ribosome-binding factor A signature. 87 108 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 SUPERFAMILY SSF89919 10 123 1.57E-29 T 22-04-2016 IPR023799 Ribosome-binding factor A domain TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 17 108 6.0E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 128 18.729 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 TMO_RS17845 9e94814f11db9fdaff8a2e48c8842a3d 149 Pfam PF02033 Ribosome-binding factor A 14 121 1.7E-23 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 TMO_RS12060 58403fa6cc6a97366dcdef70ce9ee452 83 Hamap MF_00797 UPF0335 protein . 3 80 20.204 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 TMO_RS12060 58403fa6cc6a97366dcdef70ce9ee452 83 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 9 79 3.4E-33 T 22-04-2016 IPR018753 Azospirillum phage Cd, Gp10 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 75 3.9E-11 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:3.40.50.300 79 346 9.0E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF47917 349 462 2.01E-40 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 459 3.3E-179 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 2.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:2.40.10.170 5 77 3.3E-21 T 22-04-2016 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 SMART SM00382 145 375 0.0039 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF52540 80 352 8.88E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 PANTHER PTHR15184:SF8 5 475 5.9E-222 T 22-04-2016 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 PANTHER PTHR15184 5 475 5.9E-222 T 22-04-2016 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 SUPERFAMILY SSF50615 5 77 5.49E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 464 46.593 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08285 f90eb5c260b2adc1593c54a8df751f67 475 Gene3D G3DSA:1.10.1140.10 349 462 3.5E-36 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 Pfam PF00005 ABC transporter 21 162 1.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 Gene3D G3DSA:3.40.50.300 3 226 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 PANTHER PTHR24220 6 232 3.0E-84 T 22-04-2016 TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 SMART SM00382 29 232 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 PANTHER PTHR24220:SF568 6 232 3.0E-84 T 22-04-2016 TMO_RS01695 a1356b19cc11dbcdac4159000664a848 234 SUPERFAMILY SSF52540 4 231 3.04E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03140 78781814279d8a5aeab6ceeefe36794b 340 SUPERFAMILY SSF53590 8 330 3.66E-65 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain TMO_RS03140 78781814279d8a5aeab6ceeefe36794b 340 Gene3D G3DSA:3.90.245.10 9 330 4.6E-69 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain TMO_RS03140 78781814279d8a5aeab6ceeefe36794b 340 PANTHER PTHR12304 10 274 3.7E-61 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase TMO_RS03140 78781814279d8a5aeab6ceeefe36794b 340 PANTHER PTHR12304:SF19 10 274 3.7E-61 T 22-04-2016 TMO_RS03140 78781814279d8a5aeab6ceeefe36794b 340 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 8 311 3.9E-53 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain TMO_RS01095 14b1474e72b88d95df355db6c19ab514 235 SUPERFAMILY SSF81342 19 196 1.73E-32 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 TMO_RS01095 14b1474e72b88d95df355db6c19ab514 235 Pfam PF01292 Prokaryotic cytochrome b561 20 193 6.0E-20 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TMO_RS01095 14b1474e72b88d95df355db6c19ab514 235 Gene3D G3DSA:1.20.950.20 45 196 4.8E-7 T 22-04-2016 TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 Gene3D G3DSA:3.40.50.2300 171 325 6.5E-9 T 22-04-2016 TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 Gene3D G3DSA:3.40.50.2300 326 379 1.8E-31 T 22-04-2016 TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 Gene3D G3DSA:3.40.50.2300 31 168 1.8E-31 T 22-04-2016 TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 SUPERFAMILY SSF53822 34 426 4.71E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 PANTHER PTHR30483 1 429 1.2E-34 T 22-04-2016 TMO_RS04050 90e450c3efabdd4a1329084dedf39013 437 Pfam PF13458 Periplasmic binding protein 35 393 4.7E-38 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS09965 d20962b942e7253382129a45a745ea67 91 SUPERFAMILY SSF47729 1 90 5.0E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.1E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 PANTHER PTHR33175 1 91 5.0E-41 T 22-04-2016 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 SMART SM00411 1 90 2.5E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.2E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.2E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.2E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 TMO_RS09965 d20962b942e7253382129a45a745ea67 91 Gene3D G3DSA:4.10.520.10 1 91 5.7E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 PIRSF PIRSF001549 7 328 3.3E-39 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 Gene3D G3DSA:3.30.930.10 26 319 1.1E-49 T 22-04-2016 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 Pfam PF13393 Histidyl-tRNA synthetase 13 318 2.0E-86 T 22-04-2016 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 PANTHER PTHR11476 11 322 3.4E-44 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 20 366 22.727 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 PANTHER PTHR11476:SF5 11 322 3.4E-44 T 22-04-2016 TMO_RS04630 46edf8a174f00ad3ef5abc199a363a77 391 SUPERFAMILY SSF55681 10 321 6.16E-47 T 22-04-2016 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 PANTHER PTHR21000 4 557 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.583 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 SUPERFAMILY SSF143975 4 378 4.58E-131 T 22-04-2016 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 PANTHER PTHR21000:SF5 4 557 0.0 T 22-04-2016 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 Pfam PF00920 Dehydratase family 35 554 2.0E-203 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 SUPERFAMILY SSF52016 380 557 2.04E-57 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS07565 71df6ae5fcf3c3a16e7247b69d9fa5b0 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 4.1E-220 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 TMO_RS08355 43912e9e2ae5c2b9f05ca2ba950700b4 255 PANTHER PTHR30177:SF11 18 249 2.1E-88 T 22-04-2016 TMO_RS08355 43912e9e2ae5c2b9f05ca2ba950700b4 255 Gene3D G3DSA:1.10.3720.10 55 245 1.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08355 43912e9e2ae5c2b9f05ca2ba950700b4 255 PANTHER PTHR30177 18 249 2.1E-88 T 22-04-2016 TMO_RS08355 43912e9e2ae5c2b9f05ca2ba950700b4 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 248 6.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08355 43912e9e2ae5c2b9f05ca2ba950700b4 255 SUPERFAMILY SSF161098 59 245 1.19E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 SUPERFAMILY SSF51735 12 256 1.9E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PANTHER PTHR24322 161 193 1.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 253 9.3E-55 T 22-04-2016 TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PANTHER PTHR24322:SF427 161 193 1.7E-50 T 22-04-2016 TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 Gene3D G3DSA:3.40.50.720 5 257 1.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PANTHER PTHR24322:SF427 18 145 1.7E-50 T 22-04-2016 TMO_RS03500 99705ebfdb347880849a4b2a26ef5770 269 PANTHER PTHR24322 18 145 1.7E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 226 347 1.3E-14 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 221 3.9E-10 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00086 300 341 21.0 T 22-04-2016 IPR001610 PAC motif TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00086 172 215 0.97 T 22-04-2016 IPR001610 PAC motif TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SUPERFAMILY SSF47384 345 430 7.46E-25 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00388 361 429 4.2E-26 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 4.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 4.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 4.1E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Gene3D G3DSA:1.10.287.130 366 414 1.2E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Pfam PF08448 PAS fold 106 216 6.7E-9 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SUPERFAMILY SSF55874 418 586 4.32E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Gene3D G3DSA:3.30.565.10 415 587 9.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Gene3D G3DSA:3.30.450.20 106 215 3.3E-15 T 22-04-2016 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SUPERFAMILY SSF55785 111 221 2.09E-15 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 429 1.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00091 93 166 0.76 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00091 227 293 1.6E-8 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SMART SM00387 475 588 2.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 586 1.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 PANTHER PTHR24423 105 588 5.4E-119 T 22-04-2016 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 SUPERFAMILY SSF55785 212 339 4.84E-20 T 22-04-2016 IPR000014 PAS domain TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Gene3D G3DSA:3.30.450.20 227 365 5.1E-27 T 22-04-2016 TMO_RS29340 9e7ec32e1eec56ad602f517e23ae685f 612 Pfam PF08447 PAS fold 250 322 1.1E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.30.300.10 391 515 3.9E-52 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF52402 187 408 3.09E-59 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF00117 Glutamine amidotransferase class-I 7 188 2.3E-35 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF52317 2 227 8.75E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF02540 NAD synthase 213 244 9.6E-6 T 22-04-2016 IPR022310 NAD/GMP synthase TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.5E-8 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.5E-8 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.5E-8 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 515 53.474 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.40.50.620 213 385 8.4E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Gene3D G3DSA:3.40.50.880 2 212 3.9E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 515 2.3E-145 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 Pfam PF00958 GMP synthase C terminal domain 423 514 8.8E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 76 87 3.0E-7 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 49 58 3.0E-7 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PRINTS PR00097 Anthranilate synthase component II signature 167 180 3.0E-7 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 194 3.6E-69 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 SUPERFAMILY SSF54810 395 515 1.83E-50 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PANTHER PTHR11922:SF2 1 512 7.3E-277 T 22-04-2016 TMO_RS07275 a5b5ffb5763e380c9a65acdc6f6a50b3 515 PANTHER PTHR11922 1 512 7.3E-277 T 22-04-2016 TMO_RS09160 234775ad526f3876f647ff833775e539 383 PANTHER PTHR21327:SF6 1 382 8.2E-147 T 22-04-2016 TMO_RS09160 234775ad526f3876f647ff833775e539 383 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 15 217 39.469 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09160 234775ad526f3876f647ff833775e539 383 PANTHER PTHR21327 1 382 8.2E-147 T 22-04-2016 TMO_RS09160 234775ad526f3876f647ff833775e539 383 SUPERFAMILY SSF55821 15 217 6.18E-88 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS09160 234775ad526f3876f647ff833775e539 383 SUPERFAMILY SSF142695 218 380 1.44E-39 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS09160 234775ad526f3876f647ff833775e539 383 Pfam PF00925 GTP cyclohydrolase II 229 375 5.5E-32 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS09160 234775ad526f3876f647ff833775e539 383 PIRSF PIRSF001259 16 383 6.6E-124 T 22-04-2016 TMO_RS09160 234775ad526f3876f647ff833775e539 383 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 213 6.0E-74 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09160 234775ad526f3876f647ff833775e539 383 Gene3D G3DSA:3.90.870.10 17 224 1.0E-98 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS09160 234775ad526f3876f647ff833775e539 383 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 5.7E-84 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 SUPERFAMILY SSF51735 1 152 6.32E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15180 cf455733c93997da003c821711b1c23d 330 PIRSF PIRSF000148 1 330 6.5E-119 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 SMART SM00859 2 118 4.6E-36 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 Gene3D G3DSA:3.30.360.10 139 312 4.3E-76 T 22-04-2016 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 113 2.6E-31 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 316 1.0E-48 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 330 2.0E-112 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 330 34.028 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 SUPERFAMILY SSF55347 125 317 2.37E-70 T 22-04-2016 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 PANTHER PTHR10174:SF2 63 330 6.1E-66 T 22-04-2016 TMO_RS15180 cf455733c93997da003c821711b1c23d 330 Gene3D G3DSA:3.40.50.720 1 138 5.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15180 cf455733c93997da003c821711b1c23d 330 PANTHER PTHR10174 63 330 6.1E-66 T 22-04-2016 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 SMART SM00903 19 173 1.2E-16 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 SUPERFAMILY SSF50475 3 197 3.93E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 Pfam PF01613 Flavin reductase like domain 22 163 4.6E-17 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 PANTHER PTHR33798 1 223 9.3E-90 T 22-04-2016 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 Gene3D G3DSA:2.30.110.10 12 188 1.3E-55 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS14985 b4f8615dc88d178e9874ad5332ba5717 227 PANTHER PTHR33798:SF1 1 223 9.3E-90 T 22-04-2016 TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 Pfam PF13458 Periplasmic binding protein 45 407 1.3E-67 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 PANTHER PTHR30483 97 442 8.0E-52 T 22-04-2016 TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 PANTHER PTHR30483 3 80 8.0E-52 T 22-04-2016 TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 Gene3D G3DSA:3.40.50.2300 41 186 8.5E-37 T 22-04-2016 TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 Gene3D G3DSA:3.40.50.2300 345 397 8.5E-37 T 22-04-2016 TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 SUPERFAMILY SSF53822 45 426 4.71E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS04670 c8952f642520d43dc2e8979a40baef0e 446 Gene3D G3DSA:3.40.50.2300 199 344 7.5E-20 T 22-04-2016 TMO_RS17900 f00cab667ca461a92d4d0c8a75a6f4ac 271 Gene3D G3DSA:3.40.50.720 6 258 2.3E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17900 f00cab667ca461a92d4d0c8a75a6f4ac 271 Pfam PF00899 ThiF family 14 254 6.8E-62 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TMO_RS17900 f00cab667ca461a92d4d0c8a75a6f4ac 271 SUPERFAMILY SSF69572 4 263 1.01E-90 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 TMO_RS17900 f00cab667ca461a92d4d0c8a75a6f4ac 271 PANTHER PTHR10953:SF153 1 265 2.5E-103 T 22-04-2016 TMO_RS17900 f00cab667ca461a92d4d0c8a75a6f4ac 271 PANTHER PTHR10953 1 265 2.5E-103 T 22-04-2016 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 15 329 4.1E-70 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 SUPERFAMILY SSF54826 1 125 1.47E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 360 32.94 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 SMART SM00922 142 234 3.9E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 123 1.3E-13 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 PANTHER PTHR13794:SF8 1 367 1.4E-78 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 Gene3D G3DSA:3.30.390.10 1 127 3.0E-36 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 Pfam PF13378 Enolase C-terminal domain-like 147 354 9.7E-32 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 Gene3D G3DSA:3.20.20.120 128 361 8.2E-50 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 SUPERFAMILY SSF51604 114 361 2.88E-48 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS00160 f0e7e0c3ddee53c0ac858faf9320ae46 369 PANTHER PTHR13794 1 367 1.4E-78 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 Pfam PF13452 N-terminal half of MaoC dehydratase 49 137 3.5E-9 T 22-04-2016 TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 PANTHER PTHR13078 1 297 1.1E-107 T 22-04-2016 TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 SUPERFAMILY SSF54637 8 160 2.28E-39 T 22-04-2016 IPR029069 HotDog domain TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 Pfam PF01575 MaoC like domain 163 270 1.3E-27 T 22-04-2016 IPR002539 MaoC-like domain TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 SUPERFAMILY SSF54637 164 280 1.92E-28 T 22-04-2016 IPR029069 HotDog domain TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 PANTHER PTHR13078:SF55 1 297 1.1E-107 T 22-04-2016 TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 Gene3D G3DSA:3.10.129.10 1 145 9.7E-45 T 22-04-2016 IPR029069 HotDog domain TMO_RS03515 13a45d0dd651ba2410f665ef6b09e949 304 Gene3D G3DSA:3.10.129.10 146 283 4.4E-39 T 22-04-2016 IPR029069 HotDog domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 SUPERFAMILY SSF52540 4 61 6.11E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21750 17db6464e411a5866936778a014244e4 465 Pfam PF00679 Elongation factor G C-terminus 277 362 2.3E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 SUPERFAMILY SSF54980 171 248 3.96E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 Hamap MF_00071 Elongation factor 4 [lepA]. 1 465 229.945 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 TMO_RS21750 17db6464e411a5866936778a014244e4 465 Gene3D G3DSA:3.40.50.300 4 70 4.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21750 17db6464e411a5866936778a014244e4 465 Gene3D G3DSA:2.40.30.10 71 167 8.6E-26 T 22-04-2016 TMO_RS21750 17db6464e411a5866936778a014244e4 465 Pfam PF06421 GTP-binding protein LepA C-terminus 365 465 7.1E-47 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal TMO_RS21750 17db6464e411a5866936778a014244e4 465 PANTHER PTHR23115 275 465 1.8E-229 T 22-04-2016 TMO_RS21750 17db6464e411a5866936778a014244e4 465 PANTHER PTHR23115:SF175 275 465 1.8E-229 T 22-04-2016 TMO_RS21750 17db6464e411a5866936778a014244e4 465 SUPERFAMILY SSF50447 43 166 4.86E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 SMART SM00838 276 363 6.4E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 Pfam PF03144 Elongation factor Tu domain 2 83 153 2.4E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS21750 17db6464e411a5866936778a014244e4 465 PANTHER PTHR23115 1 251 1.8E-229 T 22-04-2016 TMO_RS21750 17db6464e411a5866936778a014244e4 465 TIGRFAM TIGR01393 lepA: elongation factor 4 2 465 2.7E-216 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 TMO_RS21750 17db6464e411a5866936778a014244e4 465 SUPERFAMILY SSF54980 277 371 2.01E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 Gene3D G3DSA:3.30.70.240 279 367 5.5E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS21750 17db6464e411a5866936778a014244e4 465 Gene3D G3DSA:3.30.70.870 171 247 3.1E-26 T 22-04-2016 TMO_RS21750 17db6464e411a5866936778a014244e4 465 PANTHER PTHR23115:SF175 1 251 1.8E-229 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 3.1E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 3.1E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 Pfam PF13437 HlyD family secretion protein 214 318 1.3E-12 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 PANTHER PTHR30438:SF1 7 355 2.4E-115 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 SUPERFAMILY SSF111369 41 124 4.32E-10 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 PANTHER PTHR30438 7 355 2.4E-115 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 SUPERFAMILY SSF111369 190 292 7.32E-7 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 Gene3D G3DSA:2.40.50.100 49 80 8.8E-14 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 Gene3D G3DSA:2.40.50.100 211 243 8.8E-14 T 22-04-2016 TMO_RS10860 78bb11e80123b812aeab02f943dea8b0 355 Pfam PF13533 Biotin-lipoyl like 49 94 4.8E-13 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00086 208 250 1.7E-4 T 22-04-2016 IPR001610 PAC motif TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00086 86 128 3.5E-5 T 22-04-2016 IPR001610 PAC motif TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00283 246 493 4.9E-25 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:3.30.450.20 147 248 3.7E-24 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:3.30.450.20 23 127 3.1E-25 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 5.7E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 281 310 5.7E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF58104 259 492 8.11E-51 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF55785 21 125 1.74E-26 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 147 249 4.7E-15 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 134 1.1E-18 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00091 13 84 0.21 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SMART SM00091 137 203 0.57 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 337 487 5.2E-31 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 SUPERFAMILY SSF55785 146 247 1.13E-25 T 22-04-2016 IPR000014 PAS domain TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF08447 PAS fold 158 243 1.5E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Pfam PF08447 PAS fold 36 121 5.9E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 PANTHER PTHR24422:SF12 1 464 1.6E-156 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 PANTHER PTHR24422 1 464 1.6E-156 T 22-04-2016 TMO_RS06400 a9a674dd5bf5217feb4db47a9d4af351 494 Gene3D G3DSA:1.10.287.950 269 477 2.4E-40 T 22-04-2016 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 Gene3D G3DSA:1.20.120.220 75 216 1.4E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PANTHER PTHR11410 22 222 1.5E-53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 23 214 4.3E-31 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 Pfam PF00119 ATP synthase A chain 23 212 1.6E-44 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PRINTS PR00123 ATP synthase A subunit signature 139 154 4.6E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PRINTS PR00123 ATP synthase A subunit signature 199 214 4.6E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PRINTS PR00123 ATP synthase A subunit signature 79 95 4.6E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PRINTS PR00123 ATP synthase A subunit signature 155 177 4.6E-14 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 SUPERFAMILY SSF81336 76 212 2.09E-33 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 219 13.356 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS08305 f402e5f15b9302c71988bd8491f707de 243 PANTHER PTHR11410:SF7 22 222 1.5E-53 T 22-04-2016 TMO_RS01320 8aff0dae08799f36cbfa9862b9eef962 416 Pfam PF07690 Major Facilitator Superfamily 50 344 3.6E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS01320 8aff0dae08799f36cbfa9862b9eef962 416 Gene3D G3DSA:1.20.1250.20 16 199 8.0E-10 T 22-04-2016 TMO_RS01320 8aff0dae08799f36cbfa9862b9eef962 416 SUPERFAMILY SSF103473 32 408 1.57E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS01320 8aff0dae08799f36cbfa9862b9eef962 416 Gene3D G3DSA:1.20.1250.20 225 408 6.9E-6 T 22-04-2016 TMO_RS01320 8aff0dae08799f36cbfa9862b9eef962 416 PANTHER PTHR12778 16 400 2.6E-39 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 373 419 1.4E-15 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:1.10.150.20 437 504 1.2E-21 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:1.10.150.20 362 422 1.3E-16 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF69705 12 134 2.88E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 13 350 1.7E-137 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SMART SM00322 238 301 12.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SMART SM00322 309 378 3.2E-5 T 22-04-2016 IPR004087 K Homology domain GO:0003676 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.300.20 207 285 1.5E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SMART SM00316 142 208 7.9E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 PANTHER PTHR22648 10 456 1.3E-178 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.1480.10 12 134 4.7E-48 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF54814 208 285 2.03E-31 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Pfam PF08529 NusA N-terminal domain 13 133 2.1E-38 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 PANTHER PTHR22648:SF0 10 456 1.3E-178 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Pfam PF14520 Helix-hairpin-helix domain 442 497 1.5E-4 T 22-04-2016 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Pfam PF13184 NusA-like KH domain 238 304 3.9E-29 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF47794 438 502 2.35E-9 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:3.30.300.20 287 354 1.0E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF50249 140 207 2.94E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Gene3D G3DSA:2.40.50.140 137 206 9.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF54814 287 350 2.09E-17 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 SUPERFAMILY SSF47794 357 419 1.27E-13 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 TMO_RS17830 1c7ef32102bea82b6714044e7636407b 519 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 11 418 31.376 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 Gene3D G3DSA:1.20.1050.10 93 217 3.4E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 PANTHER PTHR11260 1 211 3.6E-67 T 22-04-2016 TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 SUPERFAMILY SSF47616 70 212 1.53E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 198 3.5E-6 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 PANTHER PTHR11260:SF286 1 211 3.6E-67 T 22-04-2016 TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 SUPERFAMILY SSF52833 1 102 7.33E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 Gene3D G3DSA:3.40.30.10 3 92 1.2E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00970 d6156017bb8c919ac646bc517dee2cdc 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 1.4E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS02100 71be0b9d253c8e1395bdb13bd820bf5e 96 Pfam PF13670 Peptidase propeptide and YPEB domain 11 94 2.4E-30 T 22-04-2016 IPR025711 PepSY domain TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 Pfam PF08281 Sigma-70, region 4 121 173 1.4E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 PANTHER PTHR30173 196 318 1.1E-51 T 22-04-2016 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 PANTHER PTHR30173 30 179 1.1E-51 T 22-04-2016 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 PANTHER PTHR30173:SF11 196 318 1.1E-51 T 22-04-2016 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 PANTHER PTHR30173:SF11 30 179 1.1E-51 T 22-04-2016 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 Gene3D G3DSA:3.10.450.50 198 308 7.4E-7 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF88659 119 174 1.18E-9 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF88946 6 92 2.83E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 SUPERFAMILY SSF54427 198 313 9.05E-9 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 Gene3D G3DSA:1.10.1740.10 7 88 6.9E-14 T 22-04-2016 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 Gene3D G3DSA:1.10.10.10 119 175 2.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 Pfam PF04542 Sigma-70 region 2 20 87 3.3E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08595 a33ae7678c7c5f35a959e916eccb77e9 324 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 174 1.5E-16 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 SUPERFAMILY SSF52540 11 232 6.89E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 PANTHER PTHR24220 14 388 2.1E-132 T 22-04-2016 TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 Pfam PF00005 ABC transporter 276 433 2.7E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 Pfam PF00005 ABC transporter 28 177 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 Gene3D G3DSA:3.40.50.300 275 491 2.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 Gene3D G3DSA:3.40.50.300 10 230 2.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 SUPERFAMILY SSF52540 273 492 3.34E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 SMART SM00382 37 225 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 SMART SM00382 284 482 4.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05780 7d80c71cc9175d652dcce7e9ae6b9235 509 PANTHER PTHR24220:SF308 14 388 2.1E-132 T 22-04-2016 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 PANTHER PTHR11986 15 431 1.3E-157 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 423 1.1E-152 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 Pfam PF00202 Aminotransferase class-III 27 422 3.9E-97 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 PANTHER PTHR11986:SF8 15 431 1.3E-157 T 22-04-2016 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 Gene3D G3DSA:3.90.1150.10 14 63 1.7E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 Gene3D G3DSA:3.90.1150.10 328 424 1.7E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 SUPERFAMILY SSF53383 14 423 3.35E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS02185 32ec92c9f3d1ccc29f593184cf93b688 444 Gene3D G3DSA:3.40.640.10 64 326 2.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 Gene3D G3DSA:3.20.20.140 65 366 7.3E-111 T 22-04-2016 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 Gene3D G3DSA:2.30.40.10 2 64 3.2E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 PANTHER PTHR32027 1 419 4.0E-138 T 22-04-2016 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 Pfam PF07969 Amidohydrolase family 44 404 9.9E-48 T 22-04-2016 IPR013108 Amidohydrolase 3 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 SUPERFAMILY SSF51338 1 56 2.16E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 SUPERFAMILY SSF51338 366 407 2.16E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 PANTHER PTHR32027:SF0 1 419 4.0E-138 T 22-04-2016 TMO_RS03415 16353b7042c324e4a9d3a6de1db1900f 430 SUPERFAMILY SSF51556 56 375 4.4E-106 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 Pfam PF03583 Secretory lipase 145 329 4.1E-19 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 PANTHER PTHR34853 6 307 3.4E-16 T 22-04-2016 TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 Gene3D G3DSA:3.40.50.1820 98 259 1.1E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 Gene3D G3DSA:3.40.50.1820 308 393 1.1E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 SUPERFAMILY SSF53474 314 393 6.05E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 SUPERFAMILY SSF53474 97 257 6.05E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16040 bedf3cdf62d4a0cec24062d4755ba87d 418 PIRSF PIRSF029171 3 415 4.3E-124 T 22-04-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 42 235 24.071 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 Pfam PF02527 rRNA small subunit methyltransferase G 51 220 5.9E-39 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 Gene3D G3DSA:3.40.50.150 34 221 7.1E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 PANTHER PTHR31760 14 206 3.4E-40 T 22-04-2016 TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 PANTHER PTHR31760:SF0 14 206 3.4E-40 T 22-04-2016 TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 SUPERFAMILY SSF53335 39 211 3.87E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17210 544fb2d37a14fa74f99cd56213b0e0a0 242 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 53 211 6.3E-34 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 SUPERFAMILY SSF46767 99 180 2.49E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 100 179 1.1E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 SUPERFAMILY SSF53155 27 104 3.14E-16 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 29 96 2.4E-7 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 101 180 7.1E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 148 154 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 PANTHER PTHR10815:SF5 30 185 1.2E-49 T 22-04-2016 TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 Gene3D G3DSA:1.10.10.10 99 183 9.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17180 8d4dbef631cbdbc409ce55df595d7c17 191 PANTHER PTHR10815 30 185 1.2E-49 T 22-04-2016 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 370 2.9E-192 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 SMART SM00829 12 368 1.4E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 Pfam PF00107 Zinc-binding dehydrogenase 197 321 1.4E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF50129 320 370 4.05E-12 T 22-04-2016 IPR011032 GroES-like TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF50129 1 185 1.11E-69 T 22-04-2016 IPR011032 GroES-like TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 112 9.5E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 Gene3D G3DSA:3.90.180.10 1 190 1.6E-62 T 22-04-2016 IPR011032 GroES-like TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 PANTHER PTHR11695 128 370 5.2E-196 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 PANTHER PTHR11695 15 108 5.2E-196 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 SUPERFAMILY SSF51735 160 335 5.22E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 Gene3D G3DSA:3.40.50.720 191 310 1.5E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 PANTHER PTHR11695:SF560 128 370 5.2E-196 T 22-04-2016 TMO_RS17420 f7a70534f1c0dd477014d498fe5ac7d5 370 PANTHER PTHR11695:SF560 15 108 5.2E-196 T 22-04-2016 TMO_RS12155 a3a9e160bb6cc0ef68abf3761781c248 383 Pfam PF01757 Acyltransferase family 29 339 1.0E-28 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 TMO_RS12155 a3a9e160bb6cc0ef68abf3761781c248 383 PANTHER PTHR23028 3 352 3.2E-79 T 22-04-2016 TMO_RS12155 a3a9e160bb6cc0ef68abf3761781c248 383 PANTHER PTHR23028:SF53 3 352 3.2E-79 T 22-04-2016 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 4.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 4.7E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 Gene3D G3DSA:1.10.10.60 252 298 3.1E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 PANTHER PTHR11019 152 300 3.7E-35 T 22-04-2016 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 250 292 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 SMART SM00342 213 296 7.3E-32 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 SUPERFAMILY SSF46689 249 299 2.69E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 SUPERFAMILY SSF46689 198 247 9.41E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 Pfam PF12833 Helix-turn-helix domain 219 298 1.1E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 PANTHER PTHR11019:SF105 152 300 3.7E-35 T 22-04-2016 TMO_RS10980 257ba65f55f2966a4e817a999876448c 301 Gene3D G3DSA:1.10.10.60 197 251 1.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 58 66 3.7E-20 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 6 21 3.7E-20 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 76 85 3.7E-20 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 30 43 3.7E-20 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PRINTS PR01100 Shikimate kinase family signature 97 114 3.7E-20 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PANTHER PTHR21087:SF0 3 179 7.7E-54 T 22-04-2016 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Pfam PF01202 Shikimate kinase 12 168 2.0E-45 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 SUPERFAMILY SSF52540 4 168 7.54E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Gene3D G3DSA:3.40.50.300 3 169 6.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 Hamap MF_00109 Shikimate kinase [aroK]. 3 169 27.765 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 ProSitePatterns PS01128 Shikimate kinase signature. 59 84 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS01765 3db1406e1f3da9b8e22fb3c9e5ddb049 184 PANTHER PTHR21087 3 179 7.7E-54 T 22-04-2016 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PANTHER PTHR11702:SF3 2 322 6.9E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 Gene3D G3DSA:2.70.210.12 2 155 1.8E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 Gene3D G3DSA:3.40.50.300 160 319 3.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 Pfam PF01926 50S ribosome-binding GTPase 162 279 4.3E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PANTHER PTHR11702 2 322 6.9E-143 T 22-04-2016 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 SUPERFAMILY SSF82051 2 158 1.57E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 SUPERFAMILY SSF52540 150 327 8.99E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.0E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 Pfam PF01018 GTP1/OBG 3 158 3.1E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 324 1.5E-134 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 Hamap MF_01454 GTPase Obg [obg]. 2 327 45.774 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_RS14955 d7cbb0e302191b4997e3f3e0a0b8f487 331 PIRSF PIRSF002401 1 330 1.1E-124 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF81653 319 415 3.92E-31 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF55008 86 154 1.7E-21 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 825 6.8E-195 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:3.40.50.1000 644 784 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:3.40.50.1000 488 531 1.2E-59 T 22-04-2016 IPR023214 HAD-like domain TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF56784 515 535 4.95E-64 T 22-04-2016 IPR023214 HAD-like domain TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF56784 574 823 4.95E-64 T 22-04-2016 IPR023214 HAD-like domain TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 ProSitePatterns PS01047 Heavy-metal-associated domain. 25 54 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 ProSitePatterns PS01047 Heavy-metal-associated domain. 92 121 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PANTHER PTHR24093 23 831 1.0E-285 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:3.30.70.100 21 83 1.1E-24 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 365 379 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 751 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 735 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 673 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 531 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 652 7.1E-29 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:3.30.70.100 86 168 1.7E-24 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 285 304 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 438 452 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 233 252 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 693 710 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 750 764 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 PRINTS PR00943 Copper-transporting ATPase signature 305 323 5.8E-9 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:2.70.150.10 248 416 5.2E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 287 794 6.2E-92 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 826 1.7E-184 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF55008 20 83 1.22E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 519 525 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF81665 416 511 2.35E-13 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF81665 765 805 2.35E-13 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 SUPERFAMILY SSF81665 263 319 2.35E-13 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 23 83 1.9E-10 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 89 151 2.4E-11 T 22-04-2016 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Pfam PF00702 haloacid dehalogenase-like hydrolase 514 730 8.3E-47 T 22-04-2016 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Pfam PF00403 Heavy-metal-associated domain 23 81 3.4E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Pfam PF00403 Heavy-metal-associated domain 90 150 1.1E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Gene3D G3DSA:3.40.1110.10 532 643 1.3E-26 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS11280 490f7f525463bf719dde5732420c4eb8 852 Pfam PF00122 E1-E2 ATPase 286 508 3.5E-70 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS04250 f8559405a15b22b10bacd1ba5ace0c43 325 Pfam PF03060 Nitronate monooxygenase 3 309 4.2E-60 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_RS04250 f8559405a15b22b10bacd1ba5ace0c43 325 PANTHER PTHR32332:SF22 1 324 7.6E-195 T 22-04-2016 TMO_RS04250 f8559405a15b22b10bacd1ba5ace0c43 325 SUPERFAMILY SSF51412 1 315 7.2E-68 T 22-04-2016 TMO_RS04250 f8559405a15b22b10bacd1ba5ace0c43 325 Gene3D G3DSA:3.20.20.70 1 304 3.7E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS04250 f8559405a15b22b10bacd1ba5ace0c43 325 PANTHER PTHR32332 1 324 7.6E-195 T 22-04-2016 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 SUPERFAMILY SSF56047 2 132 1.57E-43 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 Pfam PF00410 Ribosomal protein S8 5 132 5.5E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 Gene3D G3DSA:3.30.1370.30 2 72 3.2E-22 T 22-04-2016 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 Gene3D G3DSA:3.30.1490.10 76 132 2.3E-25 T 22-04-2016 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 PANTHER PTHR11758 1 132 4.3E-43 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.239 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 TMO_RS13185 a289a6a8d597af264a6682813a3acaa4 132 PANTHER PTHR11758:SF4 1 132 4.3E-43 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PANTHER PTHR30050 185 499 6.1E-190 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 SMART SM00760 430 499 1.1E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 252 266 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 318 345 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 480 499 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 220 240 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 284 298 4.8E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 SUPERFAMILY SSF52540 187 399 3.02E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 SMART SM00382 219 350 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Gene3D G3DSA:1.10.8.60 354 420 7.6E-27 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 25 499 29.672 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PANTHER PTHR30050 23 125 6.1E-190 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 28 499 7.2E-165 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 ProSitePatterns PS01008 DnaA protein signature. 480 499 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 431 499 7.6E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Gene3D G3DSA:1.10.1750.10 421 499 2.1E-35 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PANTHER PTHR30050:SF2 185 499 6.1E-190 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Pfam PF00308 Bacterial dnaA protein 187 403 1.9E-89 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 SUPERFAMILY SSF48295 417 499 2.62E-32 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 PANTHER PTHR30050:SF2 23 125 6.1E-190 T 22-04-2016 TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Pfam PF11638 DnaA N-terminal domain 26 87 3.5E-21 T 22-04-2016 IPR024633 DnaA N-terminal domain TMO_RS23775 eb08ff334a21e006b60ee62e7995f2a0 499 Gene3D G3DSA:3.40.50.300 183 351 3.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 SUPERFAMILY SSF53335 14 210 8.02E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 207 7.7E-61 T 22-04-2016 TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 212 36.934 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 PANTHER PTHR11579 11 206 5.5E-72 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 209 3.2E-64 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS07750 7a10f07495c3bac1a88523531dfab68e 221 Gene3D G3DSA:3.40.50.150 14 212 8.4E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.720 161 448 2.0E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 PIRSF PIRSF036684 1 757 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.10380 10 160 1.5E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 748 9.3E-90 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 1.3E-27 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 PANTHER PTHR23406 32 439 1.8E-163 T 22-04-2016 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Pfam PF03949 Malic enzyme, NAD binding domain 165 357 3.6E-20 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 PANTHER PTHR23406:SF23 32 439 1.8E-163 T 22-04-2016 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 SMART SM01274 18 151 3.9E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 Gene3D G3DSA:3.40.50.10750 568 725 5.7E-48 T 22-04-2016 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF53659 429 752 4.52E-85 T 22-04-2016 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF51735 163 452 1.04E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 SUPERFAMILY SSF53223 10 161 2.37E-52 T 22-04-2016 TMO_RS13055 0a7c6ad9cb37b4069583b20e20befdc2 769 SMART SM00919 163 400 5.1E-132 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 PANTHER PTHR11695 21 327 2.6E-85 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 SUPERFAMILY SSF51735 121 259 1.32E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 SMART SM00829 16 326 9.5E-14 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 SUPERFAMILY SSF50129 6 155 1.51E-36 T 22-04-2016 IPR011032 GroES-like TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 93 1.3E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 Gene3D G3DSA:3.40.50.720 149 273 3.7E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 PANTHER PTHR11695:SF605 21 327 2.6E-85 T 22-04-2016 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 Pfam PF00107 Zinc-binding dehydrogenase 157 257 3.6E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS02760 1a583e8528934fe4e0d730adabef1bcf 330 Gene3D G3DSA:3.90.180.10 6 148 1.3E-41 T 22-04-2016 IPR011032 GroES-like TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 PANTHER PTHR30483:SF17 21 408 4.1E-168 T 22-04-2016 TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 Gene3D G3DSA:3.40.50.2300 158 309 8.1E-14 T 22-04-2016 TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 PANTHER PTHR30483 21 408 4.1E-168 T 22-04-2016 TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 Gene3D G3DSA:3.40.50.2300 310 360 9.7E-25 T 22-04-2016 TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 Gene3D G3DSA:3.40.50.2300 32 154 9.7E-25 T 22-04-2016 TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 SUPERFAMILY SSF53822 35 394 3.1E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS02620 3d0fdd951b41499d8cbcc330cdf45063 408 Pfam PF13458 Periplasmic binding protein 35 372 4.0E-82 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 Gene3D G3DSA:3.20.20.70 9 333 8.5E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PIRSF PIRSF001415 3 334 4.4E-144 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 6.0E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 329 2.9E-137 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 SUPERFAMILY SSF51569 8 333 6.72E-139 T 22-04-2016 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 SMART SM01004 9 332 3.2E-229 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08120 5b8866c2f6c8edbbf70bf20b3dc1e140 334 PANTHER PTHR11458 9 332 5.8E-173 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.70.270 570 729 4.1E-51 T 22-04-2016 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 PANTHER PTHR10799:SF750 522 729 4.0E-27 T 22-04-2016 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 PANTHER PTHR10799 522 729 4.0E-27 T 22-04-2016 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.450.20 77 178 1.2E-13 T 22-04-2016 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 Gene3D G3DSA:3.30.450.40 405 557 2.9E-5 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 SMART SM00304 312 365 3.7E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 SMART SM00267 557 730 2.4E-53 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF158472 314 362 9.29E-5 T 22-04-2016 TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 566 729 1.8E-50 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 Pfam PF00990 Diguanylate cyclase, GGDEF domain 570 726 5.2E-43 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF55073 573 729 5.49E-46 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 SUPERFAMILY SSF55781 428 565 2.44E-7 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29150 33d7b0bcf53c27981f3ff7209cd7e735 741 Pfam PF01590 GAF domain 429 556 1.2E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 PANTHER PTHR30309 5 201 1.9E-66 T 22-04-2016 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 SMART SM01207 15 190 2.7E-81 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 PANTHER PTHR30309:SF0 5 201 1.9E-66 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 189 1.4E-48 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 12 198 20.38 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 TMO_RS12830 c99edd40cdb12bd2a38c2073a9c36af4 211 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 9 199 3.4E-55 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 285 402 7.8E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 157 201 7.8E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 PANTHER PTHR18919 2 403 1.4E-192 T 22-04-2016 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 SUPERFAMILY SSF53901 6 278 2.23E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 9 401 2.3E-128 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 SUPERFAMILY SSF53901 279 401 1.29E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00099 Thiolases active site. 384 397 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00737 Thiolases signature 2. 349 365 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Pfam PF00108 Thiolase, N-terminal domain 8 270 6.6E-63 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 PANTHER PTHR18919:SF91 2 403 1.4E-192 T 22-04-2016 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Pfam PF02803 Thiolase, C-terminal domain 278 402 5.1E-47 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 6 127 1.2E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 Gene3D G3DSA:3.40.47.10 202 284 1.2E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS10490 7e101bcca402e35b47fb7870bb43d4a7 403 PIRSF PIRSF000429 1 403 1.2E-124 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 SUPERFAMILY SSF56059 1 238 3.16E-88 T 22-04-2016 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 6.4E-170 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Pfam PF00549 CoA-ligase 262 381 1.2E-28 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.782 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Pfam PF08442 ATP-grasp domain 2 203 1.9E-84 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.40.50.261 241 383 1.0E-68 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 PANTHER PTHR11815 1 389 1.1E-246 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.30.470.20 96 239 6.9E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 Gene3D G3DSA:3.30.1490.20 22 95 5.0E-37 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 PIRSF PIRSF001554 1 388 7.1E-160 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 TMO_RS15160 3af239ddc20377e4a1877b2a1e868ec2 389 SUPERFAMILY SSF52210 239 385 5.63E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS29615 95a8e40385ca0611d8086616fdc4f2d4 292 SUPERFAMILY SSF53795 94 160 3.02E-13 T 22-04-2016 TMO_RS29615 95a8e40385ca0611d8086616fdc4f2d4 292 Gene3D G3DSA:3.40.50.300 92 216 9.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 SMART SM00490 168 257 6.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 SUPERFAMILY SSF52540 135 372 8.05E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 PANTHER PTHR12131:SF4 2 281 6.6E-103 T 22-04-2016 TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 PANTHER PTHR12131 2 281 6.6E-103 T 22-04-2016 TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 SUPERFAMILY SSF52540 2 106 2.94E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 Pfam PF00271 Helicase conserved C-terminal domain 156 255 1.4E-8 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS15415 46a3424b76c314f0a5bd174fe7256701 834 Gene3D G3DSA:3.40.50.300 154 260 3.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 Gene3D G3DSA:3.90.25.10 188 304 5.1E-28 T 22-04-2016 TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 321 7.8E-114 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 PANTHER PTHR10366:SF469 1 321 5.7E-85 T 22-04-2016 TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 249 7.7E-39 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 SUPERFAMILY SSF51735 2 321 4.88E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 PANTHER PTHR10366 1 321 5.7E-85 T 22-04-2016 TMO_RS03470 d04dc574f24b43054cff4167e9a5a74a 328 Gene3D G3DSA:3.40.50.720 2 187 1.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 PANTHER PTHR10992 98 373 3.2E-35 T 22-04-2016 TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 Pfam PF12697 Alpha/beta hydrolase family 125 369 6.4E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 208 9.4E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 222 9.4E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 164 9.4E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 SUPERFAMILY SSF53474 95 372 3.82E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS22000 04e50b135ea7e823c50c45cd3bf0eb5e 373 Gene3D G3DSA:3.40.50.1820 96 372 2.0E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 PANTHER PTHR33823 1 136 1.2E-39 T 22-04-2016 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 14 136 27.742 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 95 130 5.0E-9 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 18 127 2.6E-42 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 SUPERFAMILY SSF57716 97 136 1.14E-8 T 22-04-2016 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 PANTHER PTHR33823:SF2 1 136 1.2E-39 T 22-04-2016 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 SUPERFAMILY SSF109635 3 96 8.76E-34 T 22-04-2016 TMO_RS05505 a74197ca89cd795a48e21a52d4ccce3c 138 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 100 124 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site TMO_RS13855 bf89798caa3776073d6fe7d49b96d4e2 463 Gene3D G3DSA:1.25.40.10 136 223 8.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS13855 bf89798caa3776073d6fe7d49b96d4e2 463 Gene3D G3DSA:1.25.40.10 424 454 8.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS13855 bf89798caa3776073d6fe7d49b96d4e2 463 PANTHER PTHR16263 22 463 4.4E-84 T 22-04-2016 TMO_RS13855 bf89798caa3776073d6fe7d49b96d4e2 463 SUPERFAMILY SSF48452 88 223 4.41E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS13855 bf89798caa3776073d6fe7d49b96d4e2 463 PANTHER PTHR16263:SF4 22 463 4.4E-84 T 22-04-2016 TMO_RS08970 41332874b9116afbc435f54f539dfc31 94 SUPERFAMILY SSF54909 1 77 5.09E-11 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS08970 41332874b9116afbc435f54f539dfc31 94 Pfam PF03795 YCII-related domain 12 78 1.7E-5 T 22-04-2016 IPR005545 YCII-related TMO_RS08970 41332874b9116afbc435f54f539dfc31 94 Gene3D G3DSA:3.30.70.1060 14 82 5.8E-8 T 22-04-2016 TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 Pfam PF00005 ABC transporter 23 163 3.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 SMART SM00382 30 220 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 Gene3D G3DSA:3.40.50.300 2 228 3.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 PANTHER PTHR24220 7 243 2.1E-74 T 22-04-2016 TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 SUPERFAMILY SSF52540 3 227 7.52E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00105 a982a9c66edc5ad5c8ef4d2b0f92890c 250 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 SUPERFAMILY SSF52788 4 154 2.88E-45 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PANTHER PTHR11717:SF7 2 156 7.6E-49 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 Gene3D G3DSA:3.40.50.270 4 156 6.0E-47 T 22-04-2016 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PANTHER PTHR11717 2 156 7.6E-49 T 22-04-2016 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 4.1E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 8 25 4.1E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 4.1E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 4.1E-21 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 SMART SM00226 6 153 2.6E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS02120 6c2889c94938d35c24b1258db70bd1f9 157 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 150 1.2E-32 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 PANTHER PTHR12553:SF7 1 256 9.4E-64 T 22-04-2016 TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 PANTHER PTHR12553 1 256 9.4E-64 T 22-04-2016 TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 Pfam PF12706 Beta-lactamase superfamily domain 45 228 4.6E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 SUPERFAMILY SSF56281 2 256 3.01E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 Gene3D G3DSA:3.60.15.10 2 258 1.3E-74 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS08455 a061a2e74bf834eaa0e50a389566cc0e 263 SMART SM00849 34 227 1.8E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 SMART SM00903 25 168 1.1E-59 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 Gene3D G3DSA:2.30.110.10 16 168 5.7E-57 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 PANTHER PTHR30466:SF2 17 170 1.5E-40 T 22-04-2016 TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 SUPERFAMILY SSF50475 17 169 6.38E-50 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 PANTHER PTHR30466 17 170 1.5E-40 T 22-04-2016 TMO_RS05275 95278576fffee1df5c2e74bf9c08128f 171 Pfam PF01613 Flavin reductase like domain 26 169 3.1E-36 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.40.50.280 719 860 7.4E-48 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 923 1169 1.8E-42 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 PIRSF PIRSF000381 1 1169 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.20.20.20 351 610 3.1E-82 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF82282 2 385 7.06E-104 T 22-04-2016 IPR003726 Homocysteine-binding domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.20.20.330 2 350 5.7E-104 T 22-04-2016 IPR003726 Homocysteine-binding domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 PANTHER PTHR21091 12 379 1.3E-99 T 22-04-2016 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:3.10.196.10 952 1169 6.3E-64 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02310 B12 binding domain 722 829 2.1E-21 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 TIGRFAM TIGR02082 metH: methionine synthase 10 1169 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF00809 Pterin binding enzyme 346 579 4.0E-39 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF56507 896 1169 4.32E-91 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF52242 718 847 5.49E-38 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02574 Homocysteine S-methyltransferase 13 303 4.1E-68 T 22-04-2016 IPR003726 Homocysteine-binding domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 PANTHER PTHR21091:SF97 12 379 1.3E-99 T 22-04-2016 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF47644 631 714 2.75E-24 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Gene3D G3DSA:1.10.1240.10 629 713 3.8E-31 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 Pfam PF02607 B12 binding domain 636 709 1.1E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SUPERFAMILY SSF51717 344 611 3.4E-73 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 TMO_RS04175 b96f617290e8bbe928ad9ae7eec52d14 1169 SMART SM01018 634 716 2.0E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 PANTHER PTHR11712 1 309 3.1E-103 T 22-04-2016 TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 169 309 7.5E-11 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 Gene3D G3DSA:3.40.47.10 8 47 2.7E-10 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 Gene3D G3DSA:3.40.366.10 167 289 1.9E-43 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 Pfam PF00698 Acyl transferase domain 167 306 2.6E-34 T 22-04-2016 IPR014043 Acyl transferase TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1 125 1.9E-18 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 SUPERFAMILY SSF53901 8 46 4.09E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS23115 dc22ef1ee876939910a564d16f74a4ab 309 SUPERFAMILY SSF52151 167 295 3.14E-36 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 PANTHER PTHR11835 16 358 6.8E-156 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 SUPERFAMILY SSF53659 9 350 1.19E-113 T 22-04-2016 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 16 346 2.3E-98 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 Gene3D G3DSA:3.40.718.10 8 353 1.1E-124 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS16835 01a998b258bc84ac65944c654d19f283 496 SMART SM01329 15 346 5.4E-155 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS15620 50617b70cee9099d380f6a564482a941 109 SUPERFAMILY SSF69786 8 93 4.32E-19 T 22-04-2016 IPR003746 Protein of unknown function DUF167 TMO_RS15620 50617b70cee9099d380f6a564482a941 109 SMART SM01152 10 91 1.6E-21 T 22-04-2016 IPR003746 Protein of unknown function DUF167 TMO_RS15620 50617b70cee9099d380f6a564482a941 109 Gene3D G3DSA:3.30.1200.10 7 97 5.2E-20 T 22-04-2016 IPR003746 Protein of unknown function DUF167 TMO_RS15620 50617b70cee9099d380f6a564482a941 109 Hamap MF_00634 UPF0235 protein YggU [yggU]. 10 106 17.054 T 22-04-2016 IPR003746 Protein of unknown function DUF167 TMO_RS15620 50617b70cee9099d380f6a564482a941 109 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 14 89 3.4E-22 T 22-04-2016 IPR003746 Protein of unknown function DUF167 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 18 58 2.3E-7 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 SUPERFAMILY SSF102114 36 299 9.03E-63 T 22-04-2016 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 SMART SM00729 69 277 1.3E-12 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 Gene3D G3DSA:3.20.20.70 37 305 4.2E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 PIRSF PIRSF005963 2 317 3.4E-134 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 PANTHER PTHR10949 20 301 3.9E-160 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 TIGRFAM TIGR00510 lipA: lipoyl synthase 17 302 2.7E-115 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 Pfam PF04055 Radical SAM superfamily 76 235 2.6E-12 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS08610 4c95a2374fa8fd53af04aa2b68735847 318 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 150.949 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Gene3D G3DSA:3.40.190.10 39 185 2.1E-50 T 22-04-2016 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Gene3D G3DSA:3.40.190.10 200 313 2.8E-29 T 22-04-2016 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 PANTHER PTHR30368 18 347 3.7E-188 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 37 344 1.3E-150 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 164 172 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 Pfam PF13531 Bacterial extracellular solute-binding protein 55 298 2.9E-45 T 22-04-2016 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 PANTHER PTHR30368:SF2 18 347 3.7E-188 T 22-04-2016 TMO_RS03575 1ab82f02024f4508ae4c3bd8bb33b1bf 348 SUPERFAMILY SSF53850 39 344 9.06E-90 T 22-04-2016 TMO_RS11050 0cacc2013cee4bedd237de9516480750 90 PIRSF PIRSF017854 5 90 4.2E-37 T 22-04-2016 IPR016704 Conjugal transfer, TrbD TMO_RS11050 0cacc2013cee4bedd237de9516480750 90 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 15 87 5.0E-4 T 22-04-2016 TMO_RS11050 0cacc2013cee4bedd237de9516480750 90 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 12 81 4.3E-12 T 22-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB TMO_RS15780 4a1aa976fcd98e02daea8bd82d008848 166 SUPERFAMILY SSF55826 4 163 1.16E-45 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS15780 4a1aa976fcd98e02daea8bd82d008848 166 Pfam PF04073 Aminoacyl-tRNA editing domain 24 149 6.5E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS15780 4a1aa976fcd98e02daea8bd82d008848 166 PANTHER PTHR31423 1 163 2.0E-58 T 22-04-2016 TMO_RS15780 4a1aa976fcd98e02daea8bd82d008848 166 Gene3D G3DSA:3.90.960.10 1 164 4.2E-61 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 SUPERFAMILY SSF56935 26 711 8.47E-122 T 22-04-2016 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 Pfam PF00593 TonB dependent receptor 476 709 3.4E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 PANTHER PTHR32552 64 711 2.5E-132 T 22-04-2016 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 PANTHER PTHR32552 1 39 2.5E-132 T 22-04-2016 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 Gene3D G3DSA:2.40.170.20 188 711 7.8E-131 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 711 2.6E-107 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 Gene3D G3DSA:2.170.130.10 54 179 7.7E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 PANTHER PTHR32552:SF37 64 711 2.5E-132 T 22-04-2016 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 PANTHER PTHR32552:SF37 1 39 2.5E-132 T 22-04-2016 TMO_RS09510 f39c7e42b38816751235df1d881bfc8c 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 172 7.4E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF51621 535 818 6.54E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 182 189 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:1.10.274.10 323 410 1.2E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF55804 18 154 2.35E-32 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.40.930.10 18 155 1.8E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.30.1340.10 174 251 1.9E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 177 250 2.4E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 466 477 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 575 594 1.4E-20 T 22-04-2016 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 777 789 1.4E-20 T 22-04-2016 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 741 756 1.4E-20 T 22-04-2016 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 724 739 1.4E-20 T 22-04-2016 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Pfam PF05524 PEP-utilising enzyme, N-terminal 288 406 5.2E-18 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Pfam PF00391 PEP-utilising enzyme, mobile domain 437 507 2.0E-19 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.50.30.10 411 535 4.0E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 20 154 1.7E-28 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Gene3D G3DSA:3.20.20.60 537 841 1.5E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 61 77 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF55594 174 251 1.57E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Pfam PF00381 PTS HPr component phosphorylation site 176 250 1.6E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 287 841 1.7E-134 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PANTHER PTHR22931:SF15 327 827 3.5E-235 T 22-04-2016 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 534 817 2.2E-102 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 222 239 1.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 182 198 1.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PRINTS PR00107 Phosphocarrier protein signature 207 222 1.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF47831 323 420 1.44E-21 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 SUPERFAMILY SSF52009 406 527 1.44E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS02155 ddd1f07084edd4db90e4717403517480 847 PANTHER PTHR22931 327 827 3.5E-235 T 22-04-2016 TMO_RS15690 42644e3a4576a05a0f09ef23a177a870 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 303 4.8E-113 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 TMO_RS15690 42644e3a4576a05a0f09ef23a177a870 303 Gene3D G3DSA:3.60.15.10 2 303 8.2E-96 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15690 42644e3a4576a05a0f09ef23a177a870 303 Pfam PF12706 Beta-lactamase superfamily domain 52 270 2.4E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15690 42644e3a4576a05a0f09ef23a177a870 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 141.638 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 TMO_RS15690 42644e3a4576a05a0f09ef23a177a870 303 SUPERFAMILY SSF56281 2 303 5.58E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 207 25.917 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 8 189 7.2E-58 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 200 4.9E-59 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 Gene3D G3DSA:3.20.20.70 1 208 7.8E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 PANTHER PTHR20857:SF15 1 208 4.0E-65 T 22-04-2016 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 PANTHER PTHR20857 1 208 4.0E-65 T 22-04-2016 TMO_RS16010 89919eefed4a3ade8bbf9ee6079eeb08 212 SUPERFAMILY SSF51391 4 207 1.02E-59 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 117 138 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 143 3.0E-19 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 35 156 1.4E-46 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 37 157 7.7E-44 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 PANTHER PTHR10884 3 190 8.0E-102 T 22-04-2016 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 12 164 31.563 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 SUPERFAMILY SSF143243 12 189 8.63E-61 T 22-04-2016 TMO_RS09935 7f2460f2ac9978861ef059c77f4641b4 207 PANTHER PTHR10884:SF10 3 190 8.0E-102 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 504 684 1.9E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 Pfam PF02743 Cache domain 39 271 7.3E-13 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 PANTHER PTHR32089:SF40 411 690 4.6E-115 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 PANTHER PTHR32089:SF40 111 378 4.6E-115 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00304 343 396 0.052 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00304 593 646 35.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:1.10.287.950 452 653 1.7E-46 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 Gene3D G3DSA:3.30.450.20 174 314 1.4E-14 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 SUPERFAMILY SSF58104 439 684 1.09E-59 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 SUPERFAMILY SSF58104 371 398 1.09E-59 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 PANTHER PTHR32089 411 690 4.6E-115 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 PANTHER PTHR32089 111 378 4.6E-115 T 22-04-2016 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 SMART SM00283 440 687 6.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS08200 0a9af0e8c29029b31d270ccc0234b713 703 Pfam PF00672 HAMP domain 324 392 8.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 Pfam PF12833 Helix-turn-helix domain 222 301 1.7E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 PANTHER PTHR11019:SF77 42 308 9.7E-56 T 22-04-2016 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 Gene3D G3DSA:1.10.10.60 197 252 3.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 SUPERFAMILY SSF46689 199 250 8.72E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 268 283 4.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 299 4.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 Gene3D G3DSA:1.10.10.60 253 301 6.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 Pfam PF12852 Cupin 2 183 4.2E-39 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 PANTHER PTHR11019 42 308 9.7E-56 T 22-04-2016 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 SUPERFAMILY SSF46689 252 301 6.27E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02425 ef1ea4674847bfc0a182abd7e531dde8 317 SMART SM00342 216 299 6.9E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 Gene3D G3DSA:3.40.50.300 307 557 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 SMART SM00382 330 451 0.0023 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 SUPERFAMILY SSF160246 14 149 7.85E-17 T 22-04-2016 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 PANTHER PTHR30258:SF2 3 561 1.1E-117 T 22-04-2016 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 Pfam PF00437 Type II/IV secretion system protein 208 469 3.8E-56 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 53 152 1.8E-11 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 PANTHER PTHR30258 3 561 1.1E-117 T 22-04-2016 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 SUPERFAMILY SSF52540 195 555 2.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 397 411 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 TMO_RS09635 c55a77903fbaedcdc66ed054ecdfeefd 562 Gene3D G3DSA:3.30.450.90 186 302 3.8E-34 T 22-04-2016 TMO_RS14815 f68bb810e84a99bb497eae6490d1f33d 133 SUPERFAMILY SSF51182 6 117 1.36E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS14815 f68bb810e84a99bb497eae6490d1f33d 133 Gene3D G3DSA:2.60.120.10 13 117 4.5E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS14815 f68bb810e84a99bb497eae6490d1f33d 133 Pfam PF07883 Cupin domain 37 103 5.7E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 Pfam PF00582 Universal stress protein family 217 282 2.5E-10 T 22-04-2016 IPR006016 UspA GO:0006950 TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 SUPERFAMILY SSF52402 164 282 3.77E-18 T 22-04-2016 TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 SUPERFAMILY SSF52402 1 155 1.76E-7 T 22-04-2016 TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 Gene3D G3DSA:3.40.50.620 149 284 1.7E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 Gene3D G3DSA:3.40.50.620 1 88 9.7E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 PRINTS PR01438 Universal stress protein signature 1 19 6.7E-7 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 PRINTS PR01438 Universal stress protein signature 262 284 6.7E-7 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS29195 8c45bcde4413741bd61fbf6b068a8f75 284 PRINTS PR01438 Universal stress protein signature 244 256 6.7E-7 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PANTHER PTHR30222 5 341 2.0E-40 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 93 107 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 65 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 282 301 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 65 86 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 144 160 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 171 185 1.4E-16 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 41 1.1E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 Pfam PF13416 Bacterial extracellular solute-binding protein 58 341 1.1E-29 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 PANTHER PTHR30222:SF5 5 341 2.0E-40 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 Gene3D G3DSA:3.40.190.10 171 304 1.7E-15 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 Gene3D G3DSA:3.40.190.10 305 346 8.8E-36 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 Gene3D G3DSA:3.40.190.10 42 153 8.8E-36 T 22-04-2016 TMO_RS07005 fba78f36469e7fad0b41ff4cc9282f1b 382 SUPERFAMILY SSF53850 43 379 1.73E-61 T 22-04-2016 TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 PIRSF PIRSF005496 1 839 9.6E-305 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 SUPERFAMILY SSF52540 13 340 6.91E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Gene3D G3DSA:3.40.50.300 201 344 7.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Pfam PF08482 ATP-dependent helicase C-terminal 694 825 1.0E-52 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 119 128 - T 22-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Pfam PF04408 Helicase associated domain (HA2) 391 459 1.0E-11 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 SMART SM00490 232 330 5.4E-12 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 SMART SM00847 390 478 1.6E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 PANTHER PTHR18934 2 464 1.1E-141 T 22-04-2016 TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Gene3D G3DSA:3.40.50.300 4 162 9.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Pfam PF00271 Helicase conserved C-terminal domain 211 329 2.2E-10 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 SMART SM00487 5 187 1.4E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 838 1.5E-293 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type TMO_RS06850 d76e0806dcfca47abd67169c60bb65bc 839 Pfam PF00270 DEAD/DEAH box helicase 16 165 2.9E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 PANTHER PTHR30096 6 240 2.7E-85 T 22-04-2016 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 42 248 5.8E-37 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 PIRSF PIRSF006157 5 265 5.2E-78 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 SUPERFAMILY SSF53213 8 249 2.62E-79 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 PANTHER PTHR30096:SF0 6 240 2.7E-85 T 22-04-2016 TMO_RS16595 735503a48a12d2b6e611abf5f9769b0c 265 Gene3D G3DSA:3.40.830.10 5 262 5.0E-86 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 PANTHER PTHR22993 1 286 1.7E-112 T 22-04-2016 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 145 234 6.1E-26 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF57716 233 286 1.57E-14 T 22-04-2016 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 ProSitePatterns PS01242 Zinc finger FPG-type signature. 260 286 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF81624 2 150 2.35E-37 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 286 1.0E-81 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 SMART SM01232 145 237 1.1E-48 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 SUPERFAMILY SSF46946 146 237 1.62E-29 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Gene3D G3DSA:1.10.8.50 146 286 7.2E-49 T 22-04-2016 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 287 43.433 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Gene3D G3DSA:3.20.190.10 2 145 2.5E-38 T 22-04-2016 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 SMART SM00898 2 129 1.9E-45 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Pfam PF06827 Zinc finger found in FPG and IleRS 259 286 7.1E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 PANTHER PTHR22993:SF15 1 286 1.7E-112 T 22-04-2016 TMO_RS17935 4619952b1d9faa3a2701330b33375951 287 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 128 1.4E-34 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.10.760.10 104 200 2.5E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.10.760.10 36 57 2.5E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PRINTS PR00605 Class IC cytochrome C signature 259 281 7.1E-8 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PRINTS PR00605 Class IC cytochrome C signature 215 226 7.1E-8 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 12 288 2.2E-87 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 207 281 9.1E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 111 192 4.2E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Gene3D G3DSA:1.10.760.10 208 288 8.9E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PANTHER PTHR33751 1 54 2.2E-70 T 22-04-2016 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PANTHER PTHR33751 71 289 2.2E-70 T 22-04-2016 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 SUPERFAMILY SSF46626 31 53 8.27E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 SUPERFAMILY SSF46626 89 199 8.27E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 SUPERFAMILY SSF46626 204 287 2.33E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 13 56 8.8E-19 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PIRSF PIRSF000006 2 288 4.7E-91 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PANTHER PTHR33751:SF1 1 54 2.2E-70 T 22-04-2016 TMO_RS11485 edd8ca67c489f23e5f7acd351ce1845c 289 PANTHER PTHR33751:SF1 71 289 2.2E-70 T 22-04-2016 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 SUPERFAMILY SSF48163 329 521 8.63E-46 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 PANTHER PTHR37940 3 525 3.1E-152 T 22-04-2016 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 33 516 4.1E-55 T 22-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 12 521 30.181 T 22-04-2016 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 Gene3D G3DSA:3.40.50.620 13 194 1.8E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 Gene3D G3DSA:3.40.50.620 231 280 1.8E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 Pfam PF01921 tRNA synthetases class I (K) 12 366 4.9E-132 T 22-04-2016 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 Gene3D G3DSA:1.10.10.350 427 521 2.0E-34 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS13830 c4a90b8c573daaf89a73c6eb5f2ed0f4 528 SUPERFAMILY SSF52374 14 330 3.58E-59 T 22-04-2016 TMO_RS04200 5fb0c7765472cb7eb2a7024414591ba2 307 PANTHER PTHR30468:SF2 24 306 4.7E-64 T 22-04-2016 TMO_RS04200 5fb0c7765472cb7eb2a7024414591ba2 307 PANTHER PTHR30468 24 306 4.7E-64 T 22-04-2016 TMO_RS04200 5fb0c7765472cb7eb2a7024414591ba2 307 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 27 296 4.2E-53 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 TMO_RS04200 5fb0c7765472cb7eb2a7024414591ba2 307 SUPERFAMILY SSF51197 25 303 3.21E-75 T 22-04-2016 TMO_RS04200 5fb0c7765472cb7eb2a7024414591ba2 307 Gene3D G3DSA:3.60.130.10 20 306 1.1E-77 T 22-04-2016 TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 PANTHER PTHR35802 2 213 2.0E-52 T 22-04-2016 TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 PANTHER PTHR35802:SF1 2 213 2.0E-52 T 22-04-2016 TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 Gene3D G3DSA:2.30.110.10 4 204 1.3E-41 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 SUPERFAMILY SSF50475 10 193 1.57E-24 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 PIRSF PIRSF010372 4 207 1.9E-32 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type TMO_RS15185 727ea8674fd008b55d2cfc814695c02d 219 Pfam PF04299 Putative FMN-binding domain 4 163 4.8E-28 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Hamap MF_00822 Urease accessory protein UreE [ureE]. 33 177 19.48 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69737 103 171 2.62E-14 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69287 42 103 9.94E-15 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF02814 UreE urease accessory protein, N-terminal domain 45 95 6.2E-14 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:3.30.70.790 215 277 2.0E-13 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:3.30.70.790 104 172 6.1E-19 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 SUPERFAMILY SSF69737 218 273 1.31E-8 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF05194 UreE urease accessory protein, C-terminal domain 104 201 2.0E-20 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Pfam PF05194 UreE urease accessory protein, C-terminal domain 214 281 1.2E-13 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 SMART SM00988 32 97 4.3E-12 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal TMO_RS29260 584392b29c4bbad6a3f72266aec267ef 281 Gene3D G3DSA:2.60.260.20 50 101 2.6E-10 T 22-04-2016 TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 SUPERFAMILY SSF52540 2 227 5.43E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 Gene3D G3DSA:3.40.50.300 1 228 3.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 SMART SM00382 27 214 1.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 PANTHER PTHR24220:SF66 3 246 8.6E-88 T 22-04-2016 TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 PANTHER PTHR24220 3 246 8.6E-88 T 22-04-2016 TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 200 3.4E-78 T 22-04-2016 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 TMO_RS14780 d47303a3d50da288fc6db7622b4045bf 274 Pfam PF00005 ABC transporter 18 166 1.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 PANTHER PTHR24220 261 317 6.8E-161 T 22-04-2016 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 PANTHER PTHR24220 7 242 6.8E-161 T 22-04-2016 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 Gene3D G3DSA:3.40.50.300 3 239 2.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 36 353 7.4E-119 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 SUPERFAMILY SSF52540 6 242 1.17E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 Pfam PF08402 TOBE domain 280 353 4.5E-15 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 Pfam PF00005 ABC transporter 22 163 7.3E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 SMART SM00382 30 213 1.4E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 SUPERFAMILY SSF50331 238 353 2.47E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 PANTHER PTHR24220:SF402 261 317 6.8E-161 T 22-04-2016 TMO_RS00090 1f23c74475c31ce9287ff525c9ce2998 356 PANTHER PTHR24220:SF402 7 242 6.8E-161 T 22-04-2016 TMO_RS12135 239e9f6b097f74b96e40955a9d39928d 504 Pfam PF03972 MmgE/PrpD family 19 471 3.7E-125 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 TMO_RS12135 239e9f6b097f74b96e40955a9d39928d 504 Gene3D G3DSA:3.30.1330.120 284 424 1.7E-45 T 22-04-2016 TMO_RS12135 239e9f6b097f74b96e40955a9d39928d 504 PANTHER PTHR16943 1 493 2.7E-120 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 TMO_RS12135 239e9f6b097f74b96e40955a9d39928d 504 SUPERFAMILY SSF103378 18 481 1.31E-119 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 TMO_RS12135 239e9f6b097f74b96e40955a9d39928d 504 PANTHER PTHR16943:SF19 1 493 2.7E-120 T 22-04-2016 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 Gene3D G3DSA:1.20.120.80 80 268 1.1E-75 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 Pfam PF00510 Cytochrome c oxidase subunit III 12 268 4.5E-100 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 Gene3D G3DSA:1.10.287.70 8 74 1.3E-27 T 22-04-2016 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 SUPERFAMILY SSF81452 8 268 5.13E-99 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 PANTHER PTHR11403 5 268 9.3E-134 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 TMO_RS14160 0530e7e736c3e21668158497d40d1ed7 269 PANTHER PTHR11403:SF7 5 268 9.3E-134 T 22-04-2016 TMO_RS28960 e38270a5769b92634edece09fd25b2aa 316 SUPERFAMILY SSF101756 79 137 6.41E-8 T 22-04-2016 IPR005220 Bacterial OB-fold TMO_RS28960 e38270a5769b92634edece09fd25b2aa 316 Pfam PF13670 Peptidase propeptide and YPEB domain 258 312 1.5E-8 T 22-04-2016 IPR025711 PepSY domain TMO_RS28960 e38270a5769b92634edece09fd25b2aa 316 Pfam PF13670 Peptidase propeptide and YPEB domain 198 246 8.7E-6 T 22-04-2016 IPR025711 PepSY domain TMO_RS28960 e38270a5769b92634edece09fd25b2aa 316 Gene3D G3DSA:2.40.50.200 78 132 8.4E-4 T 22-04-2016 IPR005220 Bacterial OB-fold TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 SMART SM00460 188 257 1.9E-19 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 PANTHER PTHR33490:SF2 21 303 1.0E-72 T 22-04-2016 TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 Gene3D G3DSA:3.90.260.10 193 268 1.5E-12 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 SUPERFAMILY SSF54001 111 282 9.72E-37 T 22-04-2016 TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 20 96 6.7E-22 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 Pfam PF01841 Transglutaminase-like superfamily 154 255 1.3E-23 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS14900 02eac0cbd593d84e68861fdef4cf4446 303 PANTHER PTHR33490 21 303 1.0E-72 T 22-04-2016 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 SUPERFAMILY SSF54747 3 72 8.76E-31 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 Gene3D G3DSA:3.30.1550.10 2 72 3.5E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.3E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 SMART SM00649 9 141 7.6E-78 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-14 T 22-04-2016 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 PANTHER PTHR11661 1 142 1.7E-62 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 Gene3D G3DSA:1.10.10.250 73 141 2.4E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.9E-22 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.9E-62 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.055 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 TMO_RS13315 80c32f2b83b3079e33299a5dfd52198a 142 SUPERFAMILY SSF46906 68 140 2.22E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 Pfam PF07729 FCD domain 95 225 2.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 Gene3D G3DSA:1.10.10.10 17 87 7.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 PANTHER PTHR11751 21 111 3.4E-18 T 22-04-2016 TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 SMART SM00895 95 226 1.2E-11 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 SUPERFAMILY SSF46785 18 89 1.23E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 Gene3D G3DSA:1.20.120.530 89 232 9.9E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 SUPERFAMILY SSF48008 92 231 5.75E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 1.3E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS10715 f1968e10224ced3e64b52b2ed8b1a686 243 SMART SM00345 27 85 8.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 Gene3D G3DSA:1.10.10.10 229 286 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 SUPERFAMILY SSF88659 193 288 2.8E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 Pfam PF00140 Sigma-70 factor, region 1.2 22 47 1.2E-6 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PANTHER PTHR30376 5 284 4.1E-90 T 22-04-2016 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 Pfam PF04542 Sigma-70 region 2 56 124 1.5E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 256 271 2.4E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 80 93 2.4E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 271 282 2.4E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 104 112 2.4E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PRINTS PR00046 Major sigma-70 factor signature 237 249 2.4E-22 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 PIRSF PIRSF000770 14 297 2.9E-32 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 Pfam PF04545 Sigma-70, region 4 234 282 1.8E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 286 3.2E-102 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 Gene3D G3DSA:1.10.601.10 21 123 2.1E-40 T 22-04-2016 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 283 1.1E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 SUPERFAMILY SSF88946 19 124 1.44E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS04700 87643738911f73b8a99967dd1dbc3208 307 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.30.565.10 19 227 6.0E-88 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 46 185 2.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 16 834 101.551 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF56719 760 826 1.1E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF56719 410 576 1.1E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF54211 237 407 5.88E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SMART SM00433 49 827 5.5E-263 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 521 538 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 436 450 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 49 64 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 84 97 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 766 782 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 503 519 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 284 297 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR00418 DNA topoisomerase II family signature 127 141 1.0E-64 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 762 823 4.3E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PANTHER PTHR10169 751 834 6.5E-302 T 22-04-2016 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PANTHER PTHR10169 17 569 6.5E-302 T 22-04-2016 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF00204 DNA gyrase B 237 406 3.5E-60 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 ProSitePatterns PS00177 DNA topoisomerase II signature. 438 446 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 19 834 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Pfam PF01751 Toprim domain 435 545 4.2E-18 T 22-04-2016 IPR006171 Toprim domain TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SMART SM00387 45 190 1.3E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.40.50.670 751 816 1.1E-95 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.40.50.670 420 566 1.1E-95 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 SUPERFAMILY SSF55874 19 226 3.41E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 19 29 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 787 799 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 486 495 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 195 210 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 328 344 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 803 819 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 210 223 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 376 390 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 390 410 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 PRINTS PR01159 DNA gyrase subunit B signature 236 258 1.5E-68 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS00020 d8d31baba496380efa39af4d9dfbf48a 834 Gene3D G3DSA:3.30.230.10 236 408 1.1E-74 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 Gene3D G3DSA:3.60.120.10 18 494 3.0E-166 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 493 3.7E-164 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PANTHER PTHR11236:SF9 1 492 8.3E-206 T 22-04-2016 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 Pfam PF00425 chorismate binding enzyme 232 485 7.5E-96 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 175 3.2E-30 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 427 441 8.910208E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 347 360 8.910208E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 333 346 8.910208E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PRINTS PR00095 Anthranilate synthase component I signature 442 456 8.910208E-22 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 PANTHER PTHR11236 1 492 8.3E-206 T 22-04-2016 TMO_RS08805 eb44e46bf2ab275751a749c05c568f19 505 SUPERFAMILY SSF56322 19 494 4.84E-150 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS05555 276ee3b8a92606d751655095b885c117 128 Gene3D G3DSA:3.40.50.2300 7 125 2.9E-35 T 22-04-2016 TMO_RS05555 276ee3b8a92606d751655095b885c117 128 Pfam PF00072 Response regulator receiver domain 9 121 1.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05555 276ee3b8a92606d751655095b885c117 128 PANTHER PTHR26402 7 125 8.0E-36 T 22-04-2016 TMO_RS05555 276ee3b8a92606d751655095b885c117 128 SMART SM00448 7 121 1.1E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05555 276ee3b8a92606d751655095b885c117 128 SUPERFAMILY SSF52172 7 126 8.54E-34 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 Gene3D G3DSA:3.40.1410.10 86 222 1.3E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 SUPERFAMILY SSF46785 3 72 1.99E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 PANTHER PTHR11751 4 92 2.1E-31 T 22-04-2016 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 SMART SM00345 9 68 2.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 Pfam PF07702 UTRA domain 90 226 1.2E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 SMART SM00866 89 226 5.7E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 PANTHER PTHR11751:SF364 4 92 2.1E-31 T 22-04-2016 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.9E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.9E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 2.3E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 Gene3D G3DSA:1.10.10.10 2 72 5.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 231 1.3E-82 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 TMO_RS11815 04ac162ad547e333e70ee252e9021f17 244 SUPERFAMILY SSF64288 56 232 3.14E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 Pfam PF00271 Helicase conserved C-terminal domain 235 338 4.8E-28 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 SMART SM00490 257 338 3.3E-34 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 SUPERFAMILY SSF52540 73 355 1.27E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 SMART SM00487 20 220 4.6E-65 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 PANTHER PTHR24031 1 501 6.2E-178 T 22-04-2016 TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 Pfam PF00270 DEAD/DEAH box helicase 25 193 8.9E-54 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 Gene3D G3DSA:3.40.50.300 1 209 3.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 PANTHER PTHR24031:SF261 1 501 6.2E-178 T 22-04-2016 TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site TMO_RS10100 d2a1c9914f2678f4c4c0d08206c40ff8 521 Gene3D G3DSA:3.40.50.300 210 365 1.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09665 d28de8715f11af6ccbe168ab4c0a6348 251 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 43 64 2.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site TMO_RS09665 d28de8715f11af6ccbe168ab4c0a6348 251 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 44 64 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site TMO_RS09665 d28de8715f11af6ccbe168ab4c0a6348 251 SUPERFAMILY SSF54523 46 117 3.61E-8 T 22-04-2016 TMO_RS09665 d28de8715f11af6ccbe168ab4c0a6348 251 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 44 65 6.7E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 Gene3D G3DSA:1.10.3720.10 304 556 1.7E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 Gene3D G3DSA:1.10.3720.10 64 279 2.6E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 SUPERFAMILY SSF161098 32 284 9.7E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 384 563 2.5E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 PANTHER PTHR30193 34 295 8.3E-29 T 22-04-2016 TMO_RS14640 248626d16a41bba596b3051e222c3e14 576 SUPERFAMILY SSF161098 304 564 1.31E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 9.5E-26 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 9.5E-26 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 9.5E-26 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 9.5E-26 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.5E-26 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.30.70.1450 154 229 2.0E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.40.50.720 234 380 2.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.40.50.720 1 153 6.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02254 TrkA-N domain 236 354 1.1E-20 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02254 TrkA-N domain 3 126 1.5E-27 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF51735 234 380 1.92E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF51735 1 152 1.77E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Gene3D G3DSA:3.30.70.1450 391 451 2.6E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF116726 365 451 1.83E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 SUPERFAMILY SSF116726 137 227 1.22E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PANTHER PTHR13789 1 171 3.0E-48 T 22-04-2016 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PANTHER PTHR13789 433 445 3.0E-48 T 22-04-2016 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02080 TrkA-C domain 157 227 3.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 Pfam PF02080 TrkA-C domain 387 451 3.6E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PANTHER PTHR13789:SF225 1 171 3.0E-48 T 22-04-2016 TMO_RS08550 b34f8cada73f2234fdb407492fcb9a07 458 PANTHER PTHR13789:SF225 433 445 3.0E-48 T 22-04-2016 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF00005 ABC transporter 25 195 5.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF00005 ABC transporter 344 477 3.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 SUPERFAMILY SSF52540 311 526 3.52E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 PANTHER PTHR19211 5 559 0.0 T 22-04-2016 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 SUPERFAMILY SSF52540 10 246 2.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Gene3D G3DSA:3.40.50.300 130 280 5.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Gene3D G3DSA:3.40.50.300 9 95 5.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Gene3D G3DSA:3.40.50.300 325 538 1.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 5 557 3.9E-294 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 PANTHER PTHR19211:SF7 5 559 0.0 T 22-04-2016 TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 SMART SM00382 352 528 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 SMART SM00382 33 240 1.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04145 bfc942bb1a840310af60e2727aed1da3 560 Pfam PF12848 ABC transporter 234 306 3.0E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 8.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 SUPERFAMILY SSF46785 7 115 3.86E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 SUPERFAMILY SSF53850 86 284 8.69E-26 T 22-04-2016 TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 PANTHER PTHR30579 2 275 6.9E-56 T 22-04-2016 TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 Gene3D G3DSA:3.40.190.10 90 176 8.5E-16 T 22-04-2016 TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 Gene3D G3DSA:1.10.10.10 7 89 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 Pfam PF03466 LysR substrate binding domain 91 283 5.4E-25 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 Gene3D G3DSA:3.40.190.10 185 242 7.4E-4 T 22-04-2016 TMO_RS09035 d27e47486ad3ac8de238e6c3293d806a 286 PANTHER PTHR30579:SF0 2 275 6.9E-56 T 22-04-2016 TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 64 3.9E-20 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 PANTHER PTHR30329:SF2 152 343 4.0E-53 T 22-04-2016 TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 PANTHER PTHR30329:SF2 2 85 4.0E-53 T 22-04-2016 TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 SUPERFAMILY SSF103088 238 341 3.4E-10 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 Pfam PF00691 OmpA family 245 330 1.2E-6 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 Gene3D G3DSA:3.30.1330.60 237 341 1.1E-9 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 PANTHER PTHR30329 152 343 4.0E-53 T 22-04-2016 TMO_RS14490 aa9ae19730790c893ab2b9a71aa9a1f9 349 PANTHER PTHR30329 2 85 4.0E-53 T 22-04-2016 TMO_RS05180 eb741056d44d1082982727c6da5f990c 142 Pfam PF01042 Endoribonuclease L-PSP 29 137 2.5E-23 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family TMO_RS05180 eb741056d44d1082982727c6da5f990c 142 SUPERFAMILY SSF55298 18 139 1.07E-32 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS05180 eb741056d44d1082982727c6da5f990c 142 PANTHER PTHR11803 17 141 2.9E-28 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family TMO_RS05180 eb741056d44d1082982727c6da5f990c 142 Gene3D G3DSA:3.30.1330.40 17 139 4.7E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 Gene3D G3DSA:3.40.1190.20 2 319 1.5E-72 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 SUPERFAMILY SSF53613 5 319 2.34E-77 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 PANTHER PTHR10584:SF153 1 317 6.0E-100 T 22-04-2016 TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 274 287 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 Pfam PF00294 pfkB family carbohydrate kinase 58 317 3.2E-48 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB TMO_RS17390 5906663552f113c933f1ad49a2826aec 330 PANTHER PTHR10584 1 317 6.0E-100 T 22-04-2016 TMO_RS06160 119f26be5bd85cafdb0f0e5cd0906182 165 Gene3D G3DSA:2.40.50.180 67 113 1.6E-4 T 22-04-2016 TMO_RS06160 119f26be5bd85cafdb0f0e5cd0906182 165 SUPERFAMILY SSF50341 26 163 9.68E-31 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06160 119f26be5bd85cafdb0f0e5cd0906182 165 Pfam PF01584 CheW-like domain 29 163 9.6E-28 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06160 119f26be5bd85cafdb0f0e5cd0906182 165 PANTHER PTHR22617 28 163 4.4E-23 T 22-04-2016 TMO_RS06160 119f26be5bd85cafdb0f0e5cd0906182 165 SMART SM00260 25 162 2.1E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS00015 88a661021146f11a64451159b974d66c 421 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 421 76.411 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 TMO_RS00015 88a661021146f11a64451159b974d66c 421 Gene3D G3DSA:3.40.50.300 273 384 3.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00015 88a661021146f11a64451159b974d66c 421 Gene3D G3DSA:3.40.50.300 28 206 3.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00015 88a661021146f11a64451159b974d66c 421 ProSitePatterns PS00618 RecF protein signature 2. 342 360 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TMO_RS00015 88a661021146f11a64451159b974d66c 421 SUPERFAMILY SSF52540 28 383 4.16E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00015 88a661021146f11a64451159b974d66c 421 PANTHER PTHR32182 24 382 4.2E-22 T 22-04-2016 TMO_RS00015 88a661021146f11a64451159b974d66c 421 Pfam PF02463 RecF/RecN/SMC N terminal domain 28 368 1.9E-16 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal TMO_RS00015 88a661021146f11a64451159b974d66c 421 ProSitePatterns PS00617 RecF protein signature 1. 152 172 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 TMO_RS00015 88a661021146f11a64451159b974d66c 421 SMART SM00382 47 395 0.0045 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 PANTHER PTHR11953:SF0 1 235 3.3E-71 T 22-04-2016 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 235 1.3E-105 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 Hamap MF_00564 Ribonuclease PH [rph]. 1 235 42.803 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 Gene3D G3DSA:3.30.230.70 10 234 4.6E-30 T 22-04-2016 IPR027408 PNPase/RNase PH domain TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 PANTHER PTHR11953 1 235 3.3E-71 T 22-04-2016 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 SUPERFAMILY SSF55666 151 235 3.14E-22 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 1.5E-9 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 Pfam PF01138 3' exoribonuclease family, domain 1 11 138 2.8E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 TMO_RS17480 3fc88289520c4b271fd4d909c6b8e8af 235 SUPERFAMILY SSF54211 1 181 2.38E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 PANTHER PTHR30146 1 319 8.6E-92 T 22-04-2016 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 Gene3D G3DSA:3.40.50.2300 55 173 4.9E-39 T 22-04-2016 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.5E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 Gene3D G3DSA:3.40.50.2300 174 309 2.4E-38 T 22-04-2016 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 SMART SM00354 2 72 3.4E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 Gene3D G3DSA:1.10.260.40 3 54 2.4E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 SUPERFAMILY SSF47413 3 60 8.31E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 Pfam PF13377 Periplasmic binding protein-like domain 170 317 3.0E-30 T 22-04-2016 TMO_RS17570 b32568b2e5ca385e32fa10f60a9a5dd3 328 SUPERFAMILY SSF53822 59 318 1.18E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 Pfam PF07690 Major Facilitator Superfamily 21 414 3.4E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 3.0E-13 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 3.0E-13 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 3.0E-13 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 405 424 3.0E-13 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 Gene3D G3DSA:1.20.1250.20 19 193 3.7E-29 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 Gene3D G3DSA:1.20.1250.20 268 462 1.6E-18 T 22-04-2016 TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 SUPERFAMILY SSF103473 8 200 4.58E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 SUPERFAMILY SSF103473 253 464 4.58E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS12400 a7e1d6ea07daf93e38be9460fc733362 481 PANTHER PTHR23501 5 480 3.8E-93 T 22-04-2016 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:3.40.50.300 96 297 2.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Pfam PF02978 Signal peptide binding domain 329 428 2.5E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 PANTHER PTHR11564 1 431 2.1E-233 T 22-04-2016 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 448 32.742 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 SUPERFAMILY SSF52540 42 355 1.22E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 430 1.8E-179 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 PANTHER PTHR11564:SF7 1 431 2.1E-233 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 SMART SM00962 100 296 4.9E-104 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.7E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 SMART SM00382 99 246 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 SMART SM00963 1 86 2.6E-35 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 SUPERFAMILY SSF47446 329 429 1.8E-36 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:1.20.120.140 2 89 2.1E-33 T 22-04-2016 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Gene3D G3DSA:1.10.260.30 329 433 5.8E-39 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 TMO_RS16375 f96db9c563da0493965f0f04435c1396 451 Pfam PF00448 SRP54-type protein, GTPase domain 101 296 4.3E-68 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS04055 4291fa1f70d8f7ee3c06c08c691025cc 298 PANTHER PTHR11795 1 292 3.2E-61 T 22-04-2016 TMO_RS04055 4291fa1f70d8f7ee3c06c08c691025cc 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 282 8.4E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 PANTHER PTHR11920:SF341 160 374 8.1E-14 T 22-04-2016 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 PANTHER PTHR11920:SF341 31 38 8.1E-14 T 22-04-2016 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 172 346 5.4E-12 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 Gene3D G3DSA:3.30.70.1230 166 354 3.5E-19 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 PANTHER PTHR11920 160 374 8.1E-14 T 22-04-2016 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 PANTHER PTHR11920 31 38 8.1E-14 T 22-04-2016 TMO_RS11340 caccf58d22cc6edac90bd078e1025de8 382 SUPERFAMILY SSF55073 160 362 6.75E-35 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF08548 Peptidase M10 serralysin C terminal 1031 1178 1.8E-10 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 37 48 6.1E-9 T 22-04-2016 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 112 120 6.1E-9 T 22-04-2016 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 130 138 6.1E-9 T 22-04-2016 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 PRINTS PR00313 NodO calcium binding signature 284 293 6.1E-9 T 22-04-2016 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 450 565 1.14E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 92 219 1.11E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 2 59 4.2E-33 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 646 758 6.5E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 94 215 4.2E-33 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 405 563 4.2E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 571 645 3.0E-9 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 874 946 1.8E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 954 1131 8.1E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 765 848 1.1E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Gene3D G3DSA:2.150.10.10 238 392 2.6E-21 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 763 857 7.72E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1056 1072 0.0033 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 374 38.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 972 988 0.0023 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 4 20 33.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 878 895 7.4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 441 457 0.19 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 823 839 1.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 709 726 0.034 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 111 128 0.19 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 806 822 6.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 322 339 8.8 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 174 182 61.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 896 913 0.19 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 674 690 0.04 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1073 1090 0.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1037 1054 0.014 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 93 108 13.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 590 606 0.023 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 129 146 0.011 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 692 707 0.32 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 727 743 0.34 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 22 38 0.18 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 275 289 5.6 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 147 164 1.3 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 572 588 0.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 39 55 0.68 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 655 672 0.12 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 273 1.3 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 405 422 0.087 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 954 969 0.012 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 514 531 0.17 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 341 357 0.26 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 424 440 0.54 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 997 1174 3.66E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 361 468 9.16E-15 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 281 388 8.76E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 872 946 4.19E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 641 765 3.35E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 595 613 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 902 920 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 977 995 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 36 54 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 262 280 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 271 289 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 429 447 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 438 456 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 355 373 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 802 820 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 820 838 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 520 538 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 117 135 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 27 45 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1061 1079 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 572 649 6.93E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06615 84478e527c8decf2938f6af47e12c68d 1194 SUPERFAMILY SSF51120 2 70 1.7E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 767 835 15.0 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 389 455 6.4 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 514 579 9.2E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00091 640 708 310.0 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55874 958 1136 5.76E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 500 625 3.1E-24 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PANTHER PTHR24423 498 585 5.1E-158 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PANTHER PTHR24423 849 1298 5.1E-158 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PANTHER PTHR24423 66 124 5.1E-158 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1016 1132 2.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:1.10.287.130 912 965 7.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00086 585 628 0.0017 T 22-04-2016 IPR001610 PAC motif TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00448 1180 1294 1.8E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 499 624 2.36E-23 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00387 1016 1134 1.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF52172 1180 1299 1.57E-37 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 625 753 8.55E-10 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF00072 Response regulator receiver domain 1182 1295 2.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF02743 Cache domain 40 211 4.2E-16 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 773 888 1.5E-28 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 398 505 1.3E-23 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF12860 PAS fold 646 759 2.0E-30 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.40.50.2300 1175 1300 6.0E-41 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00304 318 371 1.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF08448 PAS fold 521 629 2.9E-12 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF00512 His Kinase A (phospho-acceptor) domain 904 969 1.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 93 184 6.5E-10 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 879 911 7.8E-4 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF47384 887 970 8.04E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 382 500 9.95E-5 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.565.10 970 1136 3.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 757 878 5.0E-13 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 631 755 7.3E-13 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Gene3D G3DSA:3.30.450.20 382 499 5.5E-9 T 22-04-2016 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SUPERFAMILY SSF55785 752 882 5.23E-11 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 SMART SM00388 904 969 8.7E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 Pfam PF00672 HAMP domain 299 367 2.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 510 633 4.6E-17 T 22-04-2016 IPR000014 PAS domain TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1058 1072 1.46E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1118 1131 1.46E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1076 1086 1.46E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS28920 8df72bd0d681d5120342a0fd0d5c4320 1327 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1094 1112 1.46E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SUPERFAMILY SSF81301 42 199 7.36E-32 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SUPERFAMILY SSF55021 727 784 3.25E-11 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 PIRSF PIRSF006288 25 910 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Gene3D G3DSA:1.10.3210.10 456 647 6.5E-28 T 22-04-2016 IPR006674 HD domain TMO_RS17580 f1eee135ded559503148720b2446d180 910 Pfam PF01966 HD domain 506 616 2.9E-10 T 22-04-2016 IPR006674 HD domain TMO_RS17580 f1eee135ded559503148720b2446d180 910 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 50 908 2.0E-300 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SMART SM00471 482 629 2.9E-6 T 22-04-2016 IPR003607 HD/PDEase domain TMO_RS17580 f1eee135ded559503148720b2446d180 910 Pfam PF08335 GlnD PII-uridylyltransferase 208 346 3.5E-38 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Gene3D G3DSA:3.30.70.260 835 906 4.3E-14 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Gene3D G3DSA:3.30.70.260 727 780 1.5E-7 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 PANTHER PTHR13734 131 720 5.7E-100 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SUPERFAMILY SSF81593 227 337 3.14E-11 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Gene3D G3DSA:3.30.460.10 37 54 5.2E-7 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Gene3D G3DSA:3.30.460.10 98 194 5.2E-7 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 910 294.093 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 TMO_RS17580 f1eee135ded559503148720b2446d180 910 PANTHER PTHR13734:SF45 131 720 5.7E-100 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SUPERFAMILY SSF81891 393 629 1.57E-20 T 22-04-2016 TMO_RS17580 f1eee135ded559503148720b2446d180 910 Pfam PF01842 ACT domain 838 888 1.8E-7 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 TMO_RS17580 f1eee135ded559503148720b2446d180 910 SUPERFAMILY SSF55021 835 905 2.87E-12 T 22-04-2016 TMO_RS10170 2e667c203e1e424be08c75402849f186 205 PANTHER PTHR23029 12 171 2.0E-29 T 22-04-2016 TMO_RS10170 2e667c203e1e424be08c75402849f186 205 Gene3D G3DSA:3.40.50.1240 14 186 8.6E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS10170 2e667c203e1e424be08c75402849f186 205 SUPERFAMILY SSF53254 14 195 1.69E-40 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS10170 2e667c203e1e424be08c75402849f186 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 14 175 1.4E-40 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS10170 2e667c203e1e424be08c75402849f186 205 PANTHER PTHR23029:SF1 12 171 2.0E-29 T 22-04-2016 TMO_RS10170 2e667c203e1e424be08c75402849f186 205 SMART SM00855 13 162 1.7E-20 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 223 234 4.8E-23 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 30 49 4.8E-23 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 107 120 4.8E-23 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PRINTS PR00990 Ribokinase signature 3 24 4.8E-23 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PANTHER PTHR10584:SF166 1 306 1.9E-49 T 22-04-2016 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 Gene3D G3DSA:3.40.1190.20 1 308 7.8E-60 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 SUPERFAMILY SSF53613 1 300 1.34E-50 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 PANTHER PTHR10584 1 306 1.9E-49 T 22-04-2016 TMO_RS02965 f28e927becbb0b96b8e410f95b73c73c 323 Pfam PF00294 pfkB family carbohydrate kinase 1 300 1.6E-41 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB TMO_RS08325 e15573472d91e0e189315714fef312de 293 Gene3D G3DSA:3.40.1380.10 28 181 7.1E-9 T 22-04-2016 TMO_RS08325 e15573472d91e0e189315714fef312de 293 SUPERFAMILY SSF52943 4 286 3.66E-39 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain TMO_RS08325 e15573472d91e0e189315714fef312de 293 Gene3D G3DSA:1.10.287.80 211 286 2.4E-14 T 22-04-2016 TMO_RS08325 e15573472d91e0e189315714fef312de 293 Pfam PF00231 ATP synthase 5 286 2.1E-34 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08325 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.4E-9 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08325 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.4E-9 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08325 e15573472d91e0e189315714fef312de 293 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.4E-9 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 PANTHER PTHR22981 1 293 4.5E-69 T 22-04-2016 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 162 9.7E-39 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 SUPERFAMILY SSF48179 167 287 1.04E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 SUPERFAMILY SSF51735 4 165 1.9E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 PIRSF PIRSF000103 1 295 8.1E-69 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 Gene3D G3DSA:3.40.50.720 2 163 1.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 285 5.1E-15 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_RS14905 2a3b59dd619b9dbe372580c2b2b35451 307 Gene3D G3DSA:1.10.1040.10 169 289 9.9E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS12575 2488b6462d3d25d6748696910d0abf12 287 Pfam PF01435 Peptidase family M48 75 273 1.3E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_RS12575 2488b6462d3d25d6748696910d0abf12 287 PANTHER PTHR10120 1 275 3.2E-49 T 22-04-2016 TMO_RS12575 2488b6462d3d25d6748696910d0abf12 287 PANTHER PTHR10120:SF19 1 275 3.2E-49 T 22-04-2016 TMO_RS12575 2488b6462d3d25d6748696910d0abf12 287 Gene3D G3DSA:3.30.2010.10 72 153 6.6E-21 T 22-04-2016 TMO_RS06755 df8239011ac4b2dab3ceba3129c82f62 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 138 1.7E-15 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 TMO_RS11575 75fbe77cf499b64f7abefcbf885022f9 464 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 448 1.8E-223 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS11575 75fbe77cf499b64f7abefcbf885022f9 464 SUPERFAMILY SSF51569 3 446 3.17E-205 T 22-04-2016 TMO_RS11575 75fbe77cf499b64f7abefcbf885022f9 464 PANTHER PTHR21337 2 451 0.0 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS11575 75fbe77cf499b64f7abefcbf885022f9 464 Pfam PF01474 Class-II DAHP synthetase family 5 442 2.3E-208 T 22-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.30.390.30 339 466 2.2E-50 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 5.5E-79 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PANTHER PTHR22912 1 463 4.5E-276 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PIRSF PIRSF000350 1 467 8.7E-99 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 332 1.9E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 460 5.2E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.50.50.60 5 148 3.4E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 Gene3D G3DSA:3.50.50.60 149 338 1.6E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PANTHER PTHR22912:SF151 1 463 4.5E-276 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 SUPERFAMILY SSF51905 4 326 1.89E-68 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 470 7.2E-178 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 SUPERFAMILY SSF55424 347 469 1.89E-43 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 4.4E-42 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 4.4E-42 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 4.4E-42 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 4.4E-42 T 22-04-2016 TMO_RS15140 f7d635431a56c95dd243814460b3260b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-42 T 22-04-2016 TMO_RS14270 75105096252c7456f186729194c7351e 598 Gene3D G3DSA:3.40.50.300 357 589 3.7E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14270 75105096252c7456f186729194c7351e 598 Gene3D G3DSA:1.20.1560.10 27 341 9.9E-77 T 22-04-2016 TMO_RS14270 75105096252c7456f186729194c7351e 598 Pfam PF00005 ABC transporter 375 524 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14270 75105096252c7456f186729194c7351e 598 SMART SM00382 384 570 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14270 75105096252c7456f186729194c7351e 598 PANTHER PTHR24221 17 598 8.6E-235 T 22-04-2016 TMO_RS14270 75105096252c7456f186729194c7351e 598 SUPERFAMILY SSF90123 26 341 1.26E-76 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS14270 75105096252c7456f186729194c7351e 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14270 75105096252c7456f186729194c7351e 598 Pfam PF00664 ABC transporter transmembrane region 38 299 1.8E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS14270 75105096252c7456f186729194c7351e 598 SUPERFAMILY SSF52540 353 595 2.51E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14270 75105096252c7456f186729194c7351e 598 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 28 597 1.2E-182 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 PANTHER PTHR13691 1 273 1.3E-142 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:2.30.30.30 119 195 1.2E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:2.40.50.140 1 114 3.2E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 SUPERFAMILY SSF50249 2 124 1.17E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 2.6E-59 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 SMART SM01383 42 118 4.6E-41 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 SMART SM01382 124 252 4.1E-95 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 48.227 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.0E-130 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Gene3D G3DSA:4.10.950.10 196 273 6.5E-36 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.9E-30 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 PIRSF PIRSF002158 5 274 7.7E-103 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 SUPERFAMILY SSF50104 126 272 4.81E-64 T 22-04-2016 IPR008991 Translation protein SH3-like domain TMO_RS13240 7a4679f0261c7c5f54076de753295dbc 274 PANTHER PTHR13691:SF5 1 273 1.3E-142 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 SUPERFAMILY SSF54373 182 288 9.61E-33 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 Gene3D G3DSA:3.50.50.60 284 360 5.3E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 Gene3D G3DSA:3.50.50.60 1 183 5.3E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PANTHER PTHR13789:SF241 2 406 7.3E-109 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 Pfam PF01494 FAD binding domain 2 173 3.4E-12 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 Pfam PF01494 FAD binding domain 292 357 5.6E-12 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 SUPERFAMILY SSF51905 284 365 3.89E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 SUPERFAMILY SSF51905 1 176 3.89E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 8.6E-20 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 8.6E-20 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 8.6E-20 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 8.6E-20 T 22-04-2016 TMO_RS15750 301e336723adc3c986827aafaa6da435 425 PANTHER PTHR13789 2 406 7.3E-109 T 22-04-2016 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 PANTHER PTHR33164 1 161 2.3E-26 T 22-04-2016 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 Pfam PF01047 MarR family 52 111 1.2E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 SMART SM00347 45 146 6.6E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 SUPERFAMILY SSF46785 26 161 1.14E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 4.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 4.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 4.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 4.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01285 930aaffcb1fa95d1184015e30d0fac17 166 Gene3D G3DSA:1.10.10.10 26 161 1.2E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 SUPERFAMILY SSF52540 14 265 2.33E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 SMART SM00382 39 251 4.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 SMART SM00382 349 541 4.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 PANTHER PTHR24220:SF442 16 301 2.0E-174 T 22-04-2016 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 PANTHER PTHR24220:SF442 340 450 2.0E-174 T 22-04-2016 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 PANTHER PTHR24220 16 301 2.0E-174 T 22-04-2016 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 PANTHER PTHR24220 340 450 2.0E-174 T 22-04-2016 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Pfam PF00005 ABC transporter 31 193 8.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Pfam PF00005 ABC transporter 341 492 1.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 SUPERFAMILY SSF52540 316 564 1.82E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 274 7.8E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 544 588 3.0E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Gene3D G3DSA:3.40.50.300 13 267 2.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13730 ec0245ac59e15441d673bffecc023769 615 Gene3D G3DSA:3.40.50.300 312 566 6.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 PANTHER PTHR32322:SF10 5 324 3.2E-66 T 22-04-2016 TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 Pfam PF00892 EamA-like transporter family 23 153 1.1E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 Pfam PF00892 EamA-like transporter family 168 299 1.9E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 SUPERFAMILY SSF103481 50 154 3.27E-11 T 22-04-2016 TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 PANTHER PTHR32322 5 324 3.2E-66 T 22-04-2016 TMO_RS08770 62646733e3354dd9f38a378799ef2b7f 332 SUPERFAMILY SSF103481 224 305 3.79E-10 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF50249 9 176 8.39E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031:SF249 267 281 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031:SF249 623 671 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031:SF249 298 601 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF52540 183 447 1.19E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031 267 281 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031 623 671 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 PANTHER PTHR24031 298 601 8.6E-105 T 22-04-2016 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 Gene3D G3DSA:3.40.50.300 450 635 1.9E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 SMART SM00490 503 586 3.4E-17 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 SUPERFAMILY SSF52540 382 643 6.41E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 SMART SM00487 264 454 7.2E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 Pfam PF00271 Helicase conserved C-terminal domain 469 585 4.8E-17 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 Gene3D G3DSA:2.40.50.140 65 140 3.1E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 Pfam PF00270 DEAD/DEAH box helicase 270 426 1.1E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS08165 44e4709184b2f527b22ea9d94185e3e6 699 Gene3D G3DSA:3.40.50.300 255 449 1.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06575 38f73f18180af0bfb50877ff4526be11 324 SUPERFAMILY SSF103481 204 306 5.1E-15 T 22-04-2016 TMO_RS06575 38f73f18180af0bfb50877ff4526be11 324 Pfam PF00892 EamA-like transporter family 167 301 8.6E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS06575 38f73f18180af0bfb50877ff4526be11 324 Pfam PF00892 EamA-like transporter family 10 142 7.1E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS06575 38f73f18180af0bfb50877ff4526be11 324 SUPERFAMILY SSF103481 65 146 1.19E-9 T 22-04-2016 TMO_RS06575 38f73f18180af0bfb50877ff4526be11 324 PANTHER PTHR22911 10 307 3.2E-33 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 SUPERFAMILY SSF49493 128 213 3.53E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PANTHER PTHR24078:SF190 6 98 5.7E-65 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PANTHER PTHR24078:SF190 118 308 5.7E-65 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PRINTS PR00625 DnaJ domain signature 41 61 3.3E-17 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PRINTS PR00625 DnaJ domain signature 24 39 3.3E-17 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PRINTS PR00625 DnaJ domain signature 6 24 3.3E-17 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 SMART SM00271 3 61 2.5E-24 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 Pfam PF01556 DnaJ C terminal domain 134 278 1.8E-32 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PANTHER PTHR24078 6 98 5.7E-65 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 PANTHER PTHR24078 118 308 5.7E-65 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 SUPERFAMILY SSF49493 205 280 1.15E-17 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 Gene3D G3DSA:1.10.287.110 3 99 1.6E-24 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 SUPERFAMILY SSF46565 3 99 2.09E-25 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 Pfam PF00226 DnaJ domain 4 66 3.8E-22 T 22-04-2016 IPR001623 DnaJ domain TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 Gene3D G3DSA:2.60.260.20 202 279 2.7E-18 T 22-04-2016 TMO_RS04950 dd67936b5c72c374ea6f1564b288271d 308 Gene3D G3DSA:2.60.260.20 128 200 2.5E-20 T 22-04-2016 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 SMART SM00530 15 70 1.3E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 SUPERFAMILY SSF47413 4 75 2.11E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 Pfam PF01381 Helix-turn-helix 17 69 8.0E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 PANTHER PTHR10245:SF38 6 73 2.8E-29 T 22-04-2016 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 PANTHER PTHR10245 6 73 2.8E-29 T 22-04-2016 TMO_RS17810 321d2942d6e5f5a57bca393bff05103b 145 Gene3D G3DSA:1.10.260.40 8 76 5.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 SMART SM00470 39 129 1.7E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 Gene3D G3DSA:3.90.1530.10 34 135 7.9E-39 T 22-04-2016 TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 SUPERFAMILY SSF110849 37 179 4.55E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 Pfam PF02195 ParB-like nuclease domain 40 129 3.1E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 PANTHER PTHR33375 2 306 3.8E-91 T 22-04-2016 TMO_RS17220 67b4c1befb02abec2c0bb1a58694630d 310 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 209 2.8E-56 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 Pfam PF02223 Thymidylate kinase 14 213 6.6E-42 T 22-04-2016 TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 Gene3D G3DSA:3.40.50.300 9 221 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 ProSitePatterns PS01331 Thymidylate kinase signature. 99 111 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 Hamap MF_00165 Thymidylate kinase [tmk]. 10 221 28.23 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 SUPERFAMILY SSF52540 9 220 2.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 PANTHER PTHR10344 9 222 1.4E-59 T 22-04-2016 TMO_RS08435 7c8388d18357a866ee18d29441481a16 229 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 213 1.9E-45 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 TMO_RS10700 fdf7d65564ab99518c027dd80318a196 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 435 2.2E-92 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS10700 fdf7d65564ab99518c027dd80318a196 440 PANTHER PTHR33362:SF5 1 435 8.1E-91 T 22-04-2016 TMO_RS10700 fdf7d65564ab99518c027dd80318a196 440 PIRSF PIRSF006066 5 438 9.5E-86 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS10700 fdf7d65564ab99518c027dd80318a196 440 PANTHER PTHR33362 1 435 8.1E-91 T 22-04-2016 TMO_RS10700 fdf7d65564ab99518c027dd80318a196 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 433 6.9E-83 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 153 228 1.0E-4 T 22-04-2016 TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 189 5.3E-21 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 PANTHER PTHR33991 1 186 6.3E-23 T 22-04-2016 TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 Pfam PF11967 Recombination protein O N terminal 2 67 8.5E-15 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 Hamap MF_00201 DNA repair protein RecO [recO]. 1 239 15.781 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 Gene3D G3DSA:2.40.50.140 4 50 8.7E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 SUPERFAMILY SSF50249 3 65 1.35E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 SUPERFAMILY SSF57863 81 185 1.6E-8 T 22-04-2016 TMO_RS08060 6921592c5fc50166972e8da5c25595d3 240 Pfam PF02565 Recombination protein O C terminal 83 223 2.9E-22 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 TMO_RS11040 5ccc936c1c3c2d3a0c7ef72638589668 254 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 10 251 7.1E-57 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 530 1.6E-126 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 PANTHER PTHR11772:SF10 436 596 5.8E-162 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 PANTHER PTHR11772:SF10 2 390 5.8E-162 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 PANTHER PTHR11772 436 596 5.8E-162 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 PANTHER PTHR11772 2 390 5.8E-162 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 Pfam PF00733 Asparagine synthase 245 596 8.5E-88 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 PIRSF PIRSF001589 1 603 4.4E-203 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 Pfam PF13537 Glutamine amidotransferase domain 47 167 5.2E-41 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 Gene3D G3DSA:3.60.20.10 1 224 6.3E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 SUPERFAMILY SSF52402 444 574 5.59E-76 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 SUPERFAMILY SSF52402 234 388 5.59E-76 T 22-04-2016 TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 599 8.5E-293 T 22-04-2016 IPR017535 Asparagine synthase family amidotransferase TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 Gene3D G3DSA:3.40.50.620 225 596 1.7E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS12595 670e0b1ecd24c19792439dfc7800454d 603 SUPERFAMILY SSF56235 1 223 1.63E-55 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 Pfam PF01478 Type IV leader peptidase family 126 232 7.9E-11 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 PANTHER PTHR30487 103 258 2.0E-13 T 22-04-2016 TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 134 151 4.36E-5 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 200 211 4.36E-5 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 189 199 4.36E-5 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS29200 55413c1831dc47319d2d44f2d3af8433 264 PANTHER PTHR30487:SF0 103 258 2.0E-13 T 22-04-2016 TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 SUPERFAMILY SSF51735 1 241 2.08E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 66 77 4.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PANTHER PTHR24322 153 185 4.5E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PANTHER PTHR24322 4 137 4.5E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 184 0.0041 T 22-04-2016 TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 Gene3D G3DSA:3.40.50.720 1 241 3.2E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03055 876a4c462c7b85091c95f15ccbbb9395 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 6 239 2.9E-44 T 22-04-2016 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 Pfam PF04542 Sigma-70 region 2 24 89 4.2E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 PANTHER PTHR30173 1 177 1.7E-32 T 22-04-2016 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 Gene3D G3DSA:1.10.1740.10 1 98 1.5E-23 T 22-04-2016 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 Gene3D G3DSA:1.10.10.10 114 176 1.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 SUPERFAMILY SSF88946 2 95 3.77E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 Pfam PF08281 Sigma-70, region 4 121 171 3.7E-8 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 174 9.8E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15125 2bc950ee091e0dd457596b3e1322fb13 187 SUPERFAMILY SSF88659 101 177 4.86E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 489 2.6E-199 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PANTHER PTHR22773:SF40 1 490 1.3E-220 T 22-04-2016 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 7.6E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 7.6E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 7.6E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 7.6E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 7.6E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 PANTHER PTHR22773 1 490 1.3E-220 T 22-04-2016 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 52 128 1.2E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 TMO_RS09885 218e15a681c88e6d69fe8349ff7a9164 507 Pfam PF00361 Proton-conducting membrane transporter 134 420 5.3E-89 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS14430 59235a28eb1294d9459ee7f3b86c0d84 219 Gene3D G3DSA:1.10.3720.10 14 216 1.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14430 59235a28eb1294d9459ee7f3b86c0d84 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 110 1.3E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS14430 59235a28eb1294d9459ee7f3b86c0d84 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 216 5.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14430 59235a28eb1294d9459ee7f3b86c0d84 219 SUPERFAMILY SSF161098 14 201 6.28E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14430 59235a28eb1294d9459ee7f3b86c0d84 219 PANTHER PTHR30614 1 219 7.9E-77 T 22-04-2016 TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 Pfam PF01713 Smr domain 179 287 6.8E-18 T 22-04-2016 IPR002625 Smr domain TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 SUPERFAMILY SSF160443 176 217 6.28E-8 T 22-04-2016 IPR002625 Smr domain TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 PANTHER PTHR35562 242 290 4.0E-31 T 22-04-2016 TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 PANTHER PTHR35562 77 217 4.0E-31 T 22-04-2016 TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 PANTHER PTHR35562:SF2 242 290 4.0E-31 T 22-04-2016 TMO_RS29635 5c9e95a1a039ca8235fd399353de3b10 290 PANTHER PTHR35562:SF2 77 217 4.0E-31 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF55785 349 473 4.71E-17 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF00512 His Kinase A (phospho-acceptor) domain 945 1014 1.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 354 481 3.3E-11 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 613 739 2.1E-10 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF55785 471 555 3.56E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF01590 GAF domain 769 920 9.8E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF12860 PAS fold 493 609 2.4E-20 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF08448 PAS fold 367 475 2.4E-10 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:1.10.287.130 940 1000 2.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:3.30.450.20 604 730 8.2E-14 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF55781 766 932 1.53E-13 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00086 433 475 0.15 T 22-04-2016 IPR001610 PAC motif TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00086 692 732 10.0 T 22-04-2016 IPR001610 PAC motif TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF05228 CHASE4 domain 111 257 4.8E-16 T 22-04-2016 IPR007892 CHASE4 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF55874 1003 1171 4.06E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1157 1170 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1098 1112 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1133 1151 1.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF13188 PAS domain 617 658 1.1E-5 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:3.30.450.20 349 473 2.8E-18 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00065 766 930 1.7E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00091 357 423 1.1E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00091 617 684 12.0 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00091 487 553 4.2 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:3.30.565.10 1001 1172 7.5E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF55785 603 730 9.77E-14 T 22-04-2016 IPR000014 PAS domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00388 945 1014 7.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SMART SM00387 1060 1173 5.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PANTHER PTHR24423 924 1173 1.7E-115 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PANTHER PTHR24423 601 730 1.7E-115 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 PANTHER PTHR24423 350 470 1.7E-115 T 22-04-2016 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1061 1172 1.1E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 SUPERFAMILY SSF47384 930 1015 4.71E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:3.30.450.40 736 933 1.6E-11 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29330 88ee1b6957b3fd5dd31bffd73b6415d3 1187 Gene3D G3DSA:3.30.450.20 477 603 8.9E-8 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 ProSitePatterns PS01008 DnaA protein signature. 469 488 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Gene3D G3DSA:3.40.50.300 172 340 3.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Pfam PF00308 Bacterial dnaA protein 176 392 2.0E-89 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Gene3D G3DSA:1.10.8.60 343 409 7.8E-27 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Gene3D G3DSA:1.10.1750.10 410 510 2.9E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 SUPERFAMILY SSF48295 406 510 1.44E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PANTHER PTHR30050:SF2 12 114 1.4E-196 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PANTHER PTHR30050:SF2 174 511 1.4E-196 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 14 510 32.405 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 SUPERFAMILY SSF52540 176 388 3.16E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 420 488 7.9E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 17 509 3.4E-170 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PANTHER PTHR30050 12 114 1.4E-196 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PANTHER PTHR30050 174 511 1.4E-196 T 22-04-2016 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 Pfam PF11638 DnaA N-terminal domain 15 76 3.6E-21 T 22-04-2016 IPR024633 DnaA N-terminal domain TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 SMART SM00760 419 488 1.1E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 469 488 5.2E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 273 287 5.2E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 307 334 5.2E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 229 5.2E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 255 5.2E-50 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS00005 f35ffa9e6f16927f90bbb9d5c2b40102 511 SMART SM00382 208 339 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09790 e5b328953e2370e658c0408634953008 408 SUPERFAMILY SSF103473 14 402 1.83E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS09790 e5b328953e2370e658c0408634953008 408 Pfam PF07690 Major Facilitator Superfamily 23 363 1.0E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS09790 e5b328953e2370e658c0408634953008 408 Gene3D G3DSA:1.20.1250.20 212 402 1.4E-7 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 Gene3D G3DSA:1.20.1250.20 19 199 1.8E-30 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PANTHER PTHR23502:SF19 10 397 7.5E-76 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 381 2.0E-76 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 3.8E-5 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 3.8E-5 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 3.8E-5 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PRINTS PR01036 Tetracycline resistance protein TetB signature 264 289 3.8E-5 T 22-04-2016 TMO_RS09790 e5b328953e2370e658c0408634953008 408 PANTHER PTHR23502 10 397 7.5E-76 T 22-04-2016 TMO_RS06430 c5544cbfa3c0616db102d56453c17ab1 452 Pfam PF01425 Amidase 44 436 7.7E-84 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06430 c5544cbfa3c0616db102d56453c17ab1 452 Gene3D G3DSA:3.90.1300.10 7 446 1.9E-114 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06430 c5544cbfa3c0616db102d56453c17ab1 452 PANTHER PTHR11895 10 452 6.2E-109 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06430 c5544cbfa3c0616db102d56453c17ab1 452 SUPERFAMILY SSF75304 6 445 3.27E-111 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS04210 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 Pfam PF07876 Stress responsive A/B Barrel Domain 2 94 8.5E-19 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel TMO_RS04210 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 SUPERFAMILY SSF54909 1 95 7.51E-23 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS04210 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 SMART SM00886 2 94 1.4E-22 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel TMO_RS04210 ff3e4f4b7d5c97ce5b2a1302f8154a03 104 Gene3D G3DSA:3.30.70.900 1 94 5.0E-21 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PANTHER PTHR23406 376 461 2.4E-169 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PANTHER PTHR23406 34 359 2.4E-169 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.10380 10 164 3.2E-48 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.720 165 452 7.3E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF01515 Phosphate acetyl/butaryl transferase 434 752 2.8E-85 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 ProSitePatterns PS00331 Malic enzymes signature. 163 179 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SMART SM00919 167 404 3.5E-140 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF53659 434 755 2.84E-87 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF53223 14 165 1.73E-50 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF00390 Malic enzyme, N-terminal domain 24 155 1.5E-25 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SMART SM01274 22 155 1.4E-77 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Gene3D G3DSA:3.40.50.10750 581 728 3.7E-50 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PIRSF PIRSF036684 3 760 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PANTHER PTHR23406:SF23 376 461 2.4E-169 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 PANTHER PTHR23406:SF23 34 359 2.4E-169 T 22-04-2016 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 Pfam PF03949 Malic enzyme, NAD binding domain 169 364 4.6E-23 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 TMO_RS17630 b4b0ddbd64ff2a38cfa1b1d73d7395d1 765 SUPERFAMILY SSF51735 167 456 1.63E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 90 104 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 Gene3D G3DSA:3.40.50.1100 108 186 8.1E-21 T 22-04-2016 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 62 387 3.6E-46 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 SUPERFAMILY SSF53686 12 398 3.14E-148 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 PANTHER PTHR10314:SF3 16 400 5.4E-231 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 400 52.15 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 PIRSF PIRSF001413 5 404 1.8E-158 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 399 1.2E-192 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 Gene3D G3DSA:3.40.50.1100 187 402 5.5E-96 T 22-04-2016 TMO_RS16310 478d6b1652df7a3d945a6fed2f362327 404 PANTHER PTHR10314 16 400 5.4E-231 T 22-04-2016 TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 PANTHER PTHR11695:SF403 13 327 9.0E-153 T 22-04-2016 TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 Gene3D G3DSA:3.90.180.10 1 165 6.4E-54 T 22-04-2016 IPR011032 GroES-like TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 12 326 2.3E-102 T 22-04-2016 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 PANTHER PTHR11695 13 327 9.0E-153 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 Gene3D G3DSA:3.40.50.720 166 296 4.9E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 SUPERFAMILY SSF51735 137 295 2.39E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 SUPERFAMILY SSF50129 1 180 3.8E-48 T 22-04-2016 IPR011032 GroES-like TMO_RS07560 4bdf4eb393489e5b7b8af53e81aa8633 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 2.0E-28 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 SUPERFAMILY SSF53850 34 344 4.21E-84 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 Gene3D G3DSA:3.40.190.10 134 279 7.3E-57 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 PANTHER PTHR30006 17 343 1.4E-151 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 Pfam PF13343 Bacterial extracellular solute-binding protein 81 310 6.5E-28 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 PANTHER PTHR30006:SF4 17 343 1.4E-151 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 PIRSF PIRSF002825 11 348 3.8E-97 T 22-04-2016 IPR026045 Ferric binding protein TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 Gene3D G3DSA:3.40.190.10 280 321 2.6E-36 T 22-04-2016 TMO_RS07710 4a342cb59fa0bf9341bc0d01a9dfa8c8 348 Gene3D G3DSA:3.40.190.10 16 130 2.6E-36 T 22-04-2016 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.063 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 PANTHER PTHR33343 1 65 8.0E-21 T 22-04-2016 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 Pfam PF01632 Ribosomal protein L35 2 62 2.2E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 SUPERFAMILY SSF143034 2 64 2.49E-21 T 22-04-2016 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.9E-21 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.1E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.1E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.1E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 TMO_RS01010 579fb60832bbc6601654ac86e489058e 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF08448 PAS fold 286 382 3.5E-5 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 470 7.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 625 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 606 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 581 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 SUPERFAMILY SSF47384 387 470 1.35E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 190 256 2.3E-7 T 22-04-2016 IPR005330 MHYT domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 127 176 5.6E-14 T 22-04-2016 IPR005330 MHYT domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF03707 Bacterial signalling protein N terminal repeat 64 121 8.9E-17 T 22-04-2016 IPR005330 MHYT domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 SUPERFAMILY SSF55874 461 626 1.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:3.30.565.10 454 627 7.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:3.30.450.20 310 407 1.5E-8 T 22-04-2016 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 SMART SM00387 515 628 5.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Gene3D G3DSA:1.10.287.130 408 453 2.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 SMART SM00388 401 470 1.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 627 2.2E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07125 1bb8ffb0ab9f6f61cace687b35453584 647 PANTHER PTHR24423 270 635 1.7E-72 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:3.40.190.10 202 250 9.5E-10 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 Pfam PF03466 LysR substrate binding domain 89 292 4.6E-36 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 PANTHER PTHR30579:SF0 4 296 5.2E-78 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:3.40.190.10 89 201 2.1E-21 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 SUPERFAMILY SSF46785 4 112 5.69E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.0E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 SUPERFAMILY SSF53850 87 294 8.38E-33 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 PANTHER PTHR30579 4 296 5.2E-78 T 22-04-2016 TMO_RS02130 5cefd72d51951c22c6cf6ec94fc913ca 296 Gene3D G3DSA:1.10.10.10 4 84 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05810 8fe15a7051eabe84ed39b1172a8e2bc4 260 Pfam PF03746 LamB/YcsF family 6 242 4.3E-87 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF TMO_RS05810 8fe15a7051eabe84ed39b1172a8e2bc4 260 SUPERFAMILY SSF88713 6 252 1.41E-85 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS05810 8fe15a7051eabe84ed39b1172a8e2bc4 260 PANTHER PTHR30292:SF0 2 255 5.9E-108 T 22-04-2016 TMO_RS05810 8fe15a7051eabe84ed39b1172a8e2bc4 260 PANTHER PTHR30292 2 255 5.9E-108 T 22-04-2016 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 PANTHER PTHR10916 1 59 1.2E-25 T 22-04-2016 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 SUPERFAMILY SSF46561 1 60 2.62E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 Gene3D G3DSA:1.10.287.310 1 59 5.1E-29 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.202 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 Pfam PF00831 Ribosomal L29 protein 5 59 9.3E-26 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13215 22f87db4eaad443bdb02699c9a861524 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.1E-24 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.20.200.10 91 356 1.9E-91 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 429 1.3E-156 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 Pfam PF00206 Lyase 8 286 1.0E-53 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 9.1E-25 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 9.1E-25 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 9.1E-25 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 9.1E-25 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.10.275.10 2 90 7.2E-33 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PANTHER PTHR11444 4 424 1.7E-155 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 Gene3D G3DSA:1.10.40.30 357 429 1.6E-34 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.2E-6 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.2E-6 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.2E-6 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.2E-6 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 SUPERFAMILY SSF48557 3 429 2.36E-135 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 PANTHER PTHR11444:SF2 4 424 1.7E-155 T 22-04-2016 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 2.1E-27 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 TMO_RS11345 7ae7ec2352e5f50672a4655b188ffee4 432 SMART SM00998 349 429 1.3E-41 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 Pfam PF00072 Response regulator receiver domain 1 109 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 Pfam PF02954 Bacterial regulatory protein, Fis family 132 161 3.4E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 Gene3D G3DSA:1.10.10.60 117 168 5.6E-30 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 SUPERFAMILY SSF52172 1 155 1.08E-32 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 Gene3D G3DSA:3.40.50.2300 1 109 6.2E-29 T 22-04-2016 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 PANTHER PTHR26402 1 109 1.1E-45 T 22-04-2016 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 PANTHER PTHR26402:SF344 1 109 1.1E-45 T 22-04-2016 TMO_RS00120 7e77219b0fed998bc1190ca487cb5894 169 SMART SM00448 1 109 2.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 SUPERFAMILY SSF55073 225 415 2.2E-48 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 PANTHER PTHR11920:SF348 177 415 6.3E-57 T 22-04-2016 TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 PANTHER PTHR11920 177 415 6.3E-57 T 22-04-2016 TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 SMART SM00044 196 397 1.4E-6 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 231 414 2.9E-25 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS17700 4fb573cb8475adb08b5251a8a27e3365 434 Gene3D G3DSA:3.30.70.1230 229 417 3.3E-35 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS07015 bda3f33f5604078973e4c14f759ff3aa 425 SUPERFAMILY SSF103473 21 410 2.75E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS07015 bda3f33f5604078973e4c14f759ff3aa 425 Pfam PF05977 Transmembrane secretion effector 13 412 3.4E-46 T 22-04-2016 IPR010290 Transmembrane secretion effector TMO_RS07015 bda3f33f5604078973e4c14f759ff3aa 425 PANTHER PTHR23513 1 412 5.8E-64 T 22-04-2016 TMO_RS07015 bda3f33f5604078973e4c14f759ff3aa 425 Gene3D G3DSA:1.20.1250.20 30 195 3.2E-14 T 22-04-2016 TMO_RS07015 bda3f33f5604078973e4c14f759ff3aa 425 Gene3D G3DSA:1.20.1250.20 235 407 5.3E-10 T 22-04-2016 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 Gene3D G3DSA:3.40.50.2300 169 316 1.6E-23 T 22-04-2016 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 61 77 2.0E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 359 374 2.0E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 39 55 2.0E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 80 98 2.0E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 SUPERFAMILY SSF53822 37 392 5.05E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 PANTHER PTHR30483 15 392 3.0E-43 T 22-04-2016 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 Pfam PF13458 Periplasmic binding protein 38 390 1.3E-67 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 Gene3D G3DSA:3.40.50.2300 34 168 5.8E-31 T 22-04-2016 TMO_RS03240 4a8470043682689432522fc9a42dccd4 427 Gene3D G3DSA:3.40.50.2300 317 380 5.8E-31 T 22-04-2016 TMO_RS02565 0fbec8626c1a7a006384db5ce0b5f7af 387 Gene3D G3DSA:3.40.50.2300 126 308 3.1E-61 T 22-04-2016 TMO_RS02565 0fbec8626c1a7a006384db5ce0b5f7af 387 Pfam PF13433 Periplasmic binding protein domain 10 369 9.8E-141 T 22-04-2016 TMO_RS02565 0fbec8626c1a7a006384db5ce0b5f7af 387 PANTHER PTHR30483:SF8 11 385 8.5E-123 T 22-04-2016 TMO_RS02565 0fbec8626c1a7a006384db5ce0b5f7af 387 PANTHER PTHR30483 11 385 8.5E-123 T 22-04-2016 TMO_RS02565 0fbec8626c1a7a006384db5ce0b5f7af 387 SUPERFAMILY SSF53822 11 370 5.38E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 PANTHER PTHR22773 1 496 1.3E-126 T 22-04-2016 TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 Pfam PF00361 Proton-conducting membrane transporter 130 421 7.8E-52 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 1.7E-15 T 22-04-2016 TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.7E-15 T 22-04-2016 TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 1.7E-15 T 22-04-2016 TMO_RS12505 e276fef384fc352de263d0714130e4fd 505 PANTHER PTHR22773:SF46 1 496 1.3E-126 T 22-04-2016 TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 PANTHER PTHR23537 7 394 4.2E-41 T 22-04-2016 TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 Gene3D G3DSA:1.20.1250.20 217 391 1.6E-13 T 22-04-2016 TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 27 387 2.6E-53 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 PANTHER PTHR23537:SF1 7 394 4.2E-41 T 22-04-2016 TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 Gene3D G3DSA:1.20.1250.20 16 189 3.5E-10 T 22-04-2016 TMO_RS02570 8c4f08a711fb02583ed7811fded5db34 395 SUPERFAMILY SSF103473 13 394 5.75E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PANTHER PTHR30419:SF4 2 305 2.0E-76 T 22-04-2016 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Gene3D G3DSA:3.40.190.10 87 180 4.6E-13 T 22-04-2016 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Gene3D G3DSA:1.10.10.10 3 85 7.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PANTHER PTHR30419 2 305 2.0E-76 T 22-04-2016 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 SUPERFAMILY SSF53850 87 296 7.78E-29 T 22-04-2016 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Gene3D G3DSA:3.40.190.10 181 265 5.0E-7 T 22-04-2016 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 SUPERFAMILY SSF46785 3 100 2.55E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 4.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05130 a50bcee57a45d1c6d2f8a4d59d1fcf4d 308 Pfam PF03466 LysR substrate binding domain 86 292 5.5E-28 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 PANTHER PTHR21363:SF0 1 297 2.9E-70 T 22-04-2016 TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 PANTHER PTHR21363 1 297 2.9E-70 T 22-04-2016 TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 Gene3D G3DSA:3.40.50.720 8 187 4.7E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 SUPERFAMILY SSF48179 182 292 8.05E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 SUPERFAMILY SSF51735 10 178 1.26E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00725 caaa5e3b673babefd1649dc586d123cd 298 Pfam PF02153 Prephenate dehydrogenase 24 282 1.9E-72 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 Gene3D G3DSA:3.40.190.10 90 175 2.9E-15 T 22-04-2016 TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 PANTHER PTHR30537:SF3 1 274 1.9E-57 T 22-04-2016 TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 SUPERFAMILY SSF46785 1 110 1.58E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 PANTHER PTHR30537 1 274 1.9E-57 T 22-04-2016 TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 Pfam PF03466 LysR substrate binding domain 86 278 9.3E-28 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 Gene3D G3DSA:1.10.10.10 1 75 4.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 SUPERFAMILY SSF53850 87 281 3.98E-31 T 22-04-2016 TMO_RS02765 dadb42dde89c9d1ac2191504b2b13a8e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 Pfam PF00297 Ribosomal protein L3 85 183 1.7E-10 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 PANTHER PTHR11229 1 219 1.0E-112 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 36.251 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 Gene3D G3DSA:4.10.960.10 78 158 4.7E-27 T 22-04-2016 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 SUPERFAMILY SSF50447 1 216 8.39E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 Gene3D G3DSA:2.40.30.10 159 210 2.8E-6 T 22-04-2016 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 Gene3D G3DSA:2.40.30.10 3 33 2.8E-6 T 22-04-2016 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 9.0E-84 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13255 7a16bcd04c58818c2f3ce67389091009 236 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 SUPERFAMILY SSF51735 183 419 3.36E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 37 163 2.4E-49 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 183 419 6.6E-57 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 Gene3D G3DSA:3.40.192.10 41 181 6.1E-51 T 22-04-2016 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 3.3E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 219 239 3.3E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 174 196 3.3E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 94 108 3.3E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PANTHER PTHR11606 13 419 4.3E-137 T 22-04-2016 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 PIRSF PIRSF000185 5 422 3.8E-150 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 Gene3D G3DSA:3.40.50.720 183 420 6.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 SMART SM00839 185 419 2.7E-63 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 TMO_RS00960 918b6dc1952b0730f2f865b96177fc37 426 SUPERFAMILY SSF53223 10 185 3.84E-62 T 22-04-2016 TMO_RS29265 3f380245722cb0853119cc17ecce654d 408 Pfam PF04748 Divergent polysaccharide deacetylase 160 371 5.3E-81 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ TMO_RS29265 3f380245722cb0853119cc17ecce654d 408 Gene3D G3DSA:3.20.20.370 142 375 8.1E-89 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_RS29265 3f380245722cb0853119cc17ecce654d 408 SUPERFAMILY SSF88713 156 371 3.81E-72 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS29265 3f380245722cb0853119cc17ecce654d 408 PANTHER PTHR30105 156 388 1.8E-74 T 22-04-2016 TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 Gene3D G3DSA:3.30.1330.30 130 207 9.5E-5 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 Pfam PF04296 Protein of unknown function (DUF448) 46 117 1.3E-20 T 22-04-2016 IPR007393 Domain of unknown function DUF448 TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 SUPERFAMILY SSF64376 43 130 1.31E-23 T 22-04-2016 IPR007393 Domain of unknown function DUF448 TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 Gene3D G3DSA:3.30.1230.10 42 129 3.1E-27 T 22-04-2016 IPR007393 Domain of unknown function DUF448 TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 SUPERFAMILY SSF55315 128 214 1.0E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 PANTHER PTHR34215 26 239 5.5E-21 T 22-04-2016 TMO_RS17835 1c525ba84addb44b8f81c3611a2e0f9c 242 PANTHER PTHR34215:SF1 26 239 5.5E-21 T 22-04-2016 TMO_RS01460 3ee2ddddd4942ad20bd5fb05b3835031 346 SUPERFAMILY SSF56112 11 319 1.44E-62 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS01460 3ee2ddddd4942ad20bd5fb05b3835031 346 Gene3D G3DSA:3.90.1200.10 110 280 1.3E-33 T 22-04-2016 TMO_RS01460 3ee2ddddd4942ad20bd5fb05b3835031 346 Pfam PF01636 Phosphotransferase enzyme family 33 264 1.0E-53 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase TMO_RS01460 3ee2ddddd4942ad20bd5fb05b3835031 346 PANTHER PTHR21310:SF14 10 249 4.1E-19 T 22-04-2016 TMO_RS01460 3ee2ddddd4942ad20bd5fb05b3835031 346 PANTHER PTHR21310 10 249 4.1E-19 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 Gene3D G3DSA:3.30.420.40 142 306 2.8E-43 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 Gene3D G3DSA:3.30.420.40 3 141 1.1E-35 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 PANTHER PTHR18964:SF134 196 326 2.8E-73 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 PANTHER PTHR18964:SF134 6 169 2.8E-73 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 PANTHER PTHR18964 196 326 2.8E-73 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 PANTHER PTHR18964 6 169 2.8E-73 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 SUPERFAMILY SSF53067 6 326 1.39E-55 T 22-04-2016 TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 Pfam PF00480 ROK family 7 327 1.6E-66 T 22-04-2016 IPR000600 ROK family TMO_RS12895 b657a3b74fd3e89776f8c7f09dde11c4 329 ProSitePatterns PS01125 ROK family signature. 137 164 - T 22-04-2016 IPR000600 ROK family TMO_RS29595 baba9ce24e3fee7f40c6223f2857ee30 275 PANTHER PTHR33303 46 259 1.1E-55 T 22-04-2016 TMO_RS29595 baba9ce24e3fee7f40c6223f2857ee30 275 PANTHER PTHR33303:SF3 46 259 1.1E-55 T 22-04-2016 TMO_RS29595 baba9ce24e3fee7f40c6223f2857ee30 275 SUPERFAMILY SSF56059 48 258 8.7E-34 T 22-04-2016 TMO_RS29595 baba9ce24e3fee7f40c6223f2857ee30 275 Pfam PF13549 ATP-grasp domain 42 255 4.6E-57 T 22-04-2016 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 3.4E-92 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PANTHER PTHR24322:SF328 152 184 5.8E-52 T 22-04-2016 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PANTHER PTHR24322:SF328 11 136 5.8E-52 T 22-04-2016 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 1.0E-63 T 22-04-2016 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.4E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PANTHER PTHR24322 152 184 5.8E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 PANTHER PTHR24322 11 136 5.8E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 SUPERFAMILY SSF51735 7 244 5.44E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 7.0E-6 T 22-04-2016 TMO_RS09380 a7739ae9d8d72bf733b9f0c4b77f670d 245 Gene3D G3DSA:3.40.50.720 1 244 1.6E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 PANTHER PTHR30368:SF1 20 336 2.3E-163 T 22-04-2016 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 SUPERFAMILY SSF53850 23 331 2.99E-77 T 22-04-2016 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 PANTHER PTHR30368 20 336 2.3E-163 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 149 157 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 Pfam PF13531 Bacterial extracellular solute-binding protein 40 280 3.3E-37 T 22-04-2016 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 22 330 1.9E-133 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 TMO_RS07860 805ea08fc2c086ddf599991cdfaad3e9 336 Gene3D G3DSA:3.40.190.10 119 282 6.4E-66 T 22-04-2016 TMO_RS01515 8d2bf1e074dcb39860c0127db05a52cb 292 SUPERFAMILY SSF161098 83 289 3.79E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01515 8d2bf1e074dcb39860c0127db05a52cb 292 Gene3D G3DSA:1.10.3720.10 81 286 1.6E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01515 8d2bf1e074dcb39860c0127db05a52cb 292 PANTHER PTHR30465:SF10 6 290 8.8E-107 T 22-04-2016 TMO_RS01515 8d2bf1e074dcb39860c0127db05a52cb 292 PANTHER PTHR30465 6 290 8.8E-107 T 22-04-2016 TMO_RS01515 8d2bf1e074dcb39860c0127db05a52cb 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 1.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 SUPERFAMILY SSF75304 3 461 7.98E-111 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 ProSitePatterns PS00571 Amidases signature. 146 177 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 Gene3D G3DSA:3.90.1300.10 4 468 6.7E-105 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 PANTHER PTHR11895:SF35 5 470 3.8E-146 T 22-04-2016 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 Pfam PF01425 Amidase 32 453 3.6E-82 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS08980 2fdd58ef771bd164af3e52c318a533d5 475 PANTHER PTHR11895 5 470 3.8E-146 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 SUPERFAMILY SSF51735 3 316 6.38E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 PANTHER PTHR10366 3 264 3.8E-41 T 22-04-2016 TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 Gene3D G3DSA:3.90.25.10 189 300 1.6E-16 T 22-04-2016 TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 205 1.0E-17 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 Gene3D G3DSA:3.40.50.720 3 188 2.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02660 0d526533b5293f0210a3501cd39df7bb 325 PANTHER PTHR10366:SF440 3 264 3.8E-41 T 22-04-2016 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Gene3D G3DSA:3.40.50.720 291 477 1.4E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Gene3D G3DSA:3.90.226.10 2 277 1.4E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 SUPERFAMILY SSF48179 475 616 4.08E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 SUPERFAMILY SSF48179 600 692 9.35E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 PANTHER PTHR23309 3 698 0.0 T 22-04-2016 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 473 9.1E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 473 497 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 SUPERFAMILY SSF51735 292 474 1.72E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Gene3D G3DSA:1.10.1040.10 478 570 1.1E-15 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 605 690 1.9E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 476 569 1.6E-18 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 PANTHER PTHR23309:SF9 3 698 0.0 T 22-04-2016 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Gene3D G3DSA:1.10.1040.10 611 692 3.7E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 192 1.2E-34 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 SUPERFAMILY SSF52096 4 287 1.04E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS03215 5af9e7fa870a9a9cc5e9734a44b6bbdf 699 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS12920 3235c10738cb64b2573c50b438c1677a 453 PANTHER PTHR35093:SF2 17 453 6.3E-102 T 22-04-2016 TMO_RS12920 3235c10738cb64b2573c50b438c1677a 453 SUPERFAMILY SSF56935 40 453 1.04E-86 T 22-04-2016 TMO_RS12920 3235c10738cb64b2573c50b438c1677a 453 PANTHER PTHR35093 17 453 6.3E-102 T 22-04-2016 TMO_RS12920 3235c10738cb64b2573c50b438c1677a 453 Gene3D G3DSA:2.40.160.60 40 453 8.9E-118 T 22-04-2016 TMO_RS12920 3235c10738cb64b2573c50b438c1677a 453 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 31 453 6.7E-102 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) TMO_RS17135 9513c94e273136939b96149a2e039367 303 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 24 106 7.9E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS17135 9513c94e273136939b96149a2e039367 303 SUPERFAMILY SSF53223 13 119 1.67E-31 T 22-04-2016 TMO_RS17135 9513c94e273136939b96149a2e039367 303 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 19 294 31.999 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS17135 9513c94e273136939b96149a2e039367 303 Gene3D G3DSA:3.40.192.10 15 123 1.1E-35 T 22-04-2016 TMO_RS17135 9513c94e273136939b96149a2e039367 303 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 288 4.6E-62 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS17135 9513c94e273136939b96149a2e039367 303 PANTHER PTHR21089 14 301 2.0E-84 T 22-04-2016 TMO_RS17135 9513c94e273136939b96149a2e039367 303 Gene3D G3DSA:3.40.50.720 124 288 1.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17135 9513c94e273136939b96149a2e039367 303 SUPERFAMILY SSF51735 120 289 9.62E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17135 9513c94e273136939b96149a2e039367 303 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 139 185 1.2E-7 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF00158 Sigma-54 interaction domain 142 308 5.6E-57 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:3.40.50.2300 4 128 6.7E-34 T 22-04-2016 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF52172 4 187 2.28E-39 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF02954 Bacterial regulatory protein, Fis family 415 453 5.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 SMART SM00448 3 116 5.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:1.10.10.60 409 458 4.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:3.40.50.300 140 314 6.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 SMART SM00382 162 305 5.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Gene3D G3DSA:1.10.8.60 315 390 3.4E-23 T 22-04-2016 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 PANTHER PTHR32071:SF17 1 461 3.0E-203 T 22-04-2016 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF46689 355 458 3.49E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 PANTHER PTHR32071 1 461 3.0E-203 T 22-04-2016 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 Pfam PF00072 Response regulator receiver domain 5 116 7.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08555 df8db96b3dd03ea73b0599ac7bba98f5 461 SUPERFAMILY SSF52540 141 376 9.46E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11090 b789a8c023d3c3256b7b43bea3886415 172 Pfam PF10502 Signal peptidase, peptidase S26 31 168 1.4E-50 T 22-04-2016 IPR019533 Peptidase S26 TMO_RS11090 b789a8c023d3c3256b7b43bea3886415 172 SUPERFAMILY SSF51306 33 169 3.5E-27 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_RS11090 b789a8c023d3c3256b7b43bea3886415 172 Gene3D G3DSA:2.10.109.10 130 169 2.4E-12 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS11090 b789a8c023d3c3256b7b43bea3886415 172 Gene3D G3DSA:2.10.109.10 35 92 2.4E-12 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 PANTHER PTHR30126:SF16 9 279 2.2E-64 T 22-04-2016 TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 SUPERFAMILY SSF46785 10 95 7.34E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 Pfam PF03466 LysR substrate binding domain 95 296 2.2E-23 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 Gene3D G3DSA:3.40.190.10 90 193 7.4E-14 T 22-04-2016 TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 1.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 PANTHER PTHR30126 9 279 2.2E-64 T 22-04-2016 TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 Gene3D G3DSA:1.10.10.10 9 89 6.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07845 2f22fee8e633e409a6b2082e66145880 298 SUPERFAMILY SSF53850 96 296 1.28E-21 T 22-04-2016 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 TIGRFAM TIGR00586 mutt: mutator mutT protein 12 134 1.9E-30 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 PANTHER PTHR22769 11 137 1.4E-32 T 22-04-2016 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 SUPERFAMILY SSF55811 6 134 5.55E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 PANTHER PTHR22769:SF35 11 137 1.4E-32 T 22-04-2016 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 Gene3D G3DSA:3.90.79.10 11 135 1.8E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 Pfam PF00293 NUDIX domain 11 130 1.8E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 PRINTS PR00502 NUDIX hydrolase family signature 52 67 6.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 PRINTS PR00502 NUDIX hydrolase family signature 38 52 6.5E-8 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS01815 7ed6a68979d4b3d5d3eda10ac3b10ef2 139 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 PANTHER PTHR24423 205 778 1.6E-153 T 22-04-2016 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF47226 760 841 1.13E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00388 347 412 6.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00448 619 733 6.4E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 460 580 1.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 5.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 5.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 5.1E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF47384 332 413 2.55E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.30.450.20 198 316 3.7E-11 T 22-04-2016 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF55785 195 308 9.57E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 PANTHER PTHR24423:SF382 205 778 1.6E-153 T 22-04-2016 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF01627 Hpt domain 783 858 2.9E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SMART SM00387 459 583 5.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF55874 401 581 1.3E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 SUPERFAMILY SSF52172 617 738 1.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF00072 Response regulator receiver domain 622 733 1.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.30.565.10 413 583 6.9E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:1.20.120.160 759 851 1.9E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:3.40.50.2300 617 747 7.2E-38 T 22-04-2016 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Gene3D G3DSA:1.10.287.130 341 408 6.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF00512 His Kinase A (phospho-acceptor) domain 348 412 5.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29320 1b42cd4b3548298f5184fbdc0923d0aa 863 Pfam PF07694 5TMR of 5TMR-LYT 39 188 4.1E-14 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 PANTHER PTHR30482:SF4 17 114 2.0E-162 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 PANTHER PTHR30482:SF4 142 378 2.0E-162 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 69 366 2.2E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 PANTHER PTHR30482 17 114 2.0E-162 T 22-04-2016 TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 PANTHER PTHR30482 142 378 2.0E-162 T 22-04-2016 TMO_RS08665 c3c11a36781880df107b704b5227c25f 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 63 376 1.7E-136 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 PANTHER PTHR30544 25 405 8.2E-171 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 42 390 73.521 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 SUPERFAMILY SSF102114 143 344 5.1E-12 T 22-04-2016 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 Pfam PF04055 Radical SAM superfamily 146 320 3.6E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 42 391 5.2E-126 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 Gene3D G3DSA:3.20.20.70 143 353 2.0E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 PANTHER PTHR30544:SF5 25 405 8.2E-171 T 22-04-2016 TMO_RS15695 e5c643c91b8a41c27fbb4fdd93977f7a 421 PIRSF PIRSF006004 33 402 7.8E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 516 535 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 PANTHER PTHR10909 176 559 3.8E-115 T 22-04-2016 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:1.10.540.10 176 289 2.4E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 409 558 3.5E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 295 395 6.0E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 178 288 5.1E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 SUPERFAMILY SSF47203 408 559 1.58E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 SUPERFAMILY SSF56645 176 420 3.93E-70 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:2.40.110.10 294 398 7.8E-29 T 22-04-2016 TMO_RS00625 ded762fb3227ed37a1f6d32632c1046a 559 Gene3D G3DSA:1.20.140.10 399 559 7.3E-55 T 22-04-2016 TMO_RS08590 a45bea9d0c9a01c0f28f7b182c204adc 163 SUPERFAMILY SSF142433 4 161 4.58E-55 T 22-04-2016 IPR008136 CinA, C-terminal TMO_RS08590 a45bea9d0c9a01c0f28f7b182c204adc 163 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 159 1.1E-45 T 22-04-2016 IPR008136 CinA, C-terminal TMO_RS08590 a45bea9d0c9a01c0f28f7b182c204adc 163 PANTHER PTHR13939 1 162 1.7E-57 T 22-04-2016 TMO_RS08590 a45bea9d0c9a01c0f28f7b182c204adc 163 Pfam PF02464 Competence-damaged protein 9 160 8.3E-57 T 22-04-2016 IPR008136 CinA, C-terminal TMO_RS08590 a45bea9d0c9a01c0f28f7b182c204adc 163 Gene3D G3DSA:3.90.950.20 6 161 1.6E-57 T 22-04-2016 IPR008136 CinA, C-terminal TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 SUPERFAMILY SSF52172 9 141 8.11E-24 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 Gene3D G3DSA:1.10.10.10 168 224 2.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 PANTHER PTHR26402:SF151 10 226 1.1E-46 T 22-04-2016 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 2.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 2.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 2.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 216 5.2E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 PANTHER PTHR26402 10 226 1.1E-46 T 22-04-2016 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 SMART SM00421 161 218 2.6E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 Gene3D G3DSA:3.40.50.2300 7 167 4.9E-26 T 22-04-2016 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 Pfam PF00072 Response regulator receiver domain 12 123 6.1E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 SUPERFAMILY SSF46894 155 224 4.08E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS14745 1d9cdf4e9ad987e9d2bc965ed657f17e 226 SMART SM00448 10 123 6.3E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 PANTHER PTHR30483:SF6 7 397 1.6E-73 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 SUPERFAMILY SSF53822 43 398 3.66E-86 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 PANTHER PTHR30483 7 397 1.6E-73 T 22-04-2016 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 86 104 4.5E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 83 4.5E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 4.5E-6 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 Gene3D G3DSA:3.40.50.2300 44 242 6.3E-53 T 22-04-2016 TMO_RS08250 5fae476515fa68fa96a673697e52205f 410 Pfam PF13458 Periplasmic binding protein 45 394 7.8E-79 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 SMART SM00419 167 215 8.0E-8 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 Gene3D G3DSA:1.10.10.10 151 222 8.6E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 PANTHER PTHR24567 1 222 1.4E-35 T 22-04-2016 TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 Pfam PF00027 Cyclic nucleotide-binding domain 33 118 4.8E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 Gene3D G3DSA:2.60.120.10 13 136 2.4E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 SUPERFAMILY SSF51206 12 138 5.63E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 SUPERFAMILY SSF46785 149 223 7.74E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 Pfam PF13545 Crp-like helix-turn-helix domain 151 222 7.9E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS00180 4b9957df320c80f77f2b663cc7d59dda 226 SMART SM00100 13 131 1.4E-4 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 131 3.8E-31 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 Pfam PF02082 Transcriptional regulator 3 82 1.5E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 Gene3D G3DSA:1.10.10.10 3 134 5.3E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 PANTHER PTHR33221:SF2 3 135 4.8E-40 T 22-04-2016 TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.9E-40 T 22-04-2016 IPR014290 SUF system FeS cluster assembly regulator TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 PANTHER PTHR33221 3 135 4.8E-40 T 22-04-2016 TMO_RS00545 27e4ab7106c7d0e2b46eb49f7ed2e1d6 145 SUPERFAMILY SSF46785 4 133 7.98E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 PANTHER PTHR40254:SF1 8 468 8.2E-80 T 22-04-2016 TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 Gene3D G3DSA:3.40.50.720 3 50 3.2E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 Gene3D G3DSA:3.40.50.720 103 206 3.2E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 Pfam PF13454 FAD-NAD(P)-binding 9 166 1.3E-34 T 22-04-2016 TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 Gene3D G3DSA:3.50.50.60 207 276 6.5E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 SUPERFAMILY SSF51905 5 239 1.25E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07865 5bbf9b227d3a3bb3c626fff2b6e354f4 469 PANTHER PTHR40254 8 468 8.2E-80 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 Pfam PF00005 ABC transporter 18 162 1.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 SUPERFAMILY SSF50331 250 370 3.64E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 SUPERFAMILY SSF52540 14 232 2.13E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 Gene3D G3DSA:3.40.50.300 18 228 6.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 Gene3D G3DSA:2.40.50.100 299 367 2.6E-14 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 371 1.8E-115 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 SMART SM00382 25 212 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 PANTHER PTHR24220:SF284 259 293 5.5E-101 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 PANTHER PTHR24220:SF284 2 227 5.5E-101 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 Pfam PF03459 TOBE domain 303 367 8.4E-11 T 22-04-2016 IPR005116 Transport-associated OB, type 1 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 PANTHER PTHR24220 259 293 5.5E-101 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 PANTHER PTHR24220 2 227 5.5E-101 T 22-04-2016 TMO_RS15025 4628e9c9f10c9a086450c8cc88836df4 373 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 Pfam PF08281 Sigma-70, region 4 121 173 1.2E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 SUPERFAMILY SSF88946 22 91 1.88E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 SUPERFAMILY SSF88659 103 179 3.36E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 PANTHER PTHR30173:SF30 22 178 2.0E-32 T 22-04-2016 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 177 5.4E-26 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 Gene3D G3DSA:1.10.10.10 115 178 8.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 PANTHER PTHR30173 22 178 2.0E-32 T 22-04-2016 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 Gene3D G3DSA:1.10.1740.10 22 87 1.1E-14 T 22-04-2016 TMO_RS13025 ca3a46526213041e1ae976e0c17b8235 182 Pfam PF04542 Sigma-70 region 2 23 86 4.8E-14 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08010 6920d2ed2c88ea8c9288c768a519cd4a 263 SUPERFAMILY SSF63892 26 250 8.5E-42 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 TMO_RS08010 6920d2ed2c88ea8c9288c768a519cd4a 263 PANTHER PTHR30456 24 254 1.5E-32 T 22-04-2016 TMO_RS08010 6920d2ed2c88ea8c9288c768a519cd4a 263 PANTHER PTHR30456:SF0 24 254 1.5E-32 T 22-04-2016 TMO_RS08010 6920d2ed2c88ea8c9288c768a519cd4a 263 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 27 247 1.3E-48 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 TMO_RS08010 6920d2ed2c88ea8c9288c768a519cd4a 263 Gene3D G3DSA:3.20.20.70 26 251 5.2E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08725 28b8b33a3a02ec574726110c3541ecd6 257 Pfam PF02563 Polysaccharide biosynthesis/export protein 58 130 6.5E-16 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TMO_RS08725 28b8b33a3a02ec574726110c3541ecd6 257 PANTHER PTHR33619 61 223 1.4E-29 T 22-04-2016 TMO_RS08725 28b8b33a3a02ec574726110c3541ecd6 257 Gene3D G3DSA:3.10.560.10 125 217 2.0E-13 T 22-04-2016 TMO_RS08725 28b8b33a3a02ec574726110c3541ecd6 257 Gene3D G3DSA:3.30.1950.10 66 124 5.1E-13 T 22-04-2016 TMO_RS08725 28b8b33a3a02ec574726110c3541ecd6 257 Pfam PF10531 SLBB domain 137 191 6.5E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 Gene3D G3DSA:3.30.420.40 205 389 9.5E-62 T 22-04-2016 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PANTHER PTHR21060 2 390 6.7E-124 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 TIGRFAM TIGR00016 ackA: acetate kinase 2 390 1.1E-95 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 SUPERFAMILY SSF53067 159 390 1.11E-66 T 22-04-2016 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PANTHER PTHR21060:SF11 2 390 6.7E-124 T 22-04-2016 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 Hamap MF_00020 Acetate kinase [ackA]. 1 392 143.102 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 Gene3D G3DSA:3.30.420.40 87 204 4.3E-6 T 22-04-2016 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 6 17 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 371 383 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 174 187 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 319 335 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 203 224 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PRINTS PR00471 Acetate kinase family signature 297 310 4.6E-26 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 Pfam PF00871 Acetokinase family 6 384 5.5E-97 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 PIRSF PIRSF000722 2 391 9.0E-122 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 SUPERFAMILY SSF53067 5 195 1.42E-53 T 22-04-2016 TMO_RS12930 cd6f5858bd7d1ca8ab4753882e7aba75 392 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 SUPERFAMILY SSF47203 225 379 1.77E-59 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 PANTHER PTHR10909 1 381 1.4E-200 T 22-04-2016 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 7.6E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 PANTHER PTHR10909:SF145 1 381 1.4E-200 T 22-04-2016 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:2.40.110.10 121 216 1.2E-41 T 22-04-2016 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:1.10.540.10 2 118 2.0E-41 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.1E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Gene3D G3DSA:1.20.140.10 217 378 5.1E-69 T 22-04-2016 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.8E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS06905 ffb9bd11068fa01a09b1a87550fada24 383 SUPERFAMILY SSF56645 2 240 3.53E-85 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PANTHER PTHR11482 1 419 1.6E-163 T 22-04-2016 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 41.447 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 2.7E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 2.7E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.7E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.7E-26 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 SUPERFAMILY SSF51419 26 282 2.36E-82 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 286 390 9.5E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 SUPERFAMILY SSF50621 253 417 1.42E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 280 2.7E-60 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 Gene3D G3DSA:3.20.20.10 36 267 1.8E-81 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 413 1.2E-147 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 6.8E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 6.8E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 6.8E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 6.8E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 6.8E-23 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 Gene3D G3DSA:2.40.37.10 268 418 3.3E-50 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS00670 2422152efcc84322bea49207f9f720f5 419 PANTHER PTHR11482:SF5 1 419 1.6E-163 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PANTHER PTHR32089 102 252 1.2E-121 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PANTHER PTHR32089 285 564 1.2E-121 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 SUPERFAMILY SSF58104 313 560 1.44E-60 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 SUPERFAMILY SSF58104 237 272 1.44E-60 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00283 307 561 4.9E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF12729 Four helix bundle sensory module for signal transduction 11 183 6.0E-15 T 22-04-2016 IPR024478 4HB MCP domain TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 511 8.3E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 8.3E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 432 8.3E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 357 8.3E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00397 458 525 0.0028 T 22-04-2016 IPR000727 Target SNARE coiled-coil homology domain GO:0005515 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 SMART SM00304 217 270 2.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 560 1.9E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 Pfam PF00672 HAMP domain 199 259 5.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 Gene3D G3DSA:1.10.287.950 324 530 2.9E-46 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PANTHER PTHR32089:SF40 102 252 1.2E-121 T 22-04-2016 TMO_RS01140 bcd82714ff49a2458e07f3eb17dcb240 566 PANTHER PTHR32089:SF40 285 564 1.2E-121 T 22-04-2016 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 Pfam PF13500 AAA domain 3 191 8.3E-50 T 22-04-2016 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 199 25.064 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 SUPERFAMILY SSF52540 1 193 1.31E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 Gene3D G3DSA:3.40.50.300 2 195 4.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 PIRSF PIRSF006755 1 210 2.4E-47 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 PANTHER PTHR21343:SF0 1 198 2.2E-44 T 22-04-2016 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 158 2.2E-33 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02190 c24a789ce1d59f2609f6e14290f1493b 212 PANTHER PTHR21343 1 198 2.2E-44 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 6 676 3.9E-295 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81665 45 103 4.45E-7 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81665 353 363 4.45E-7 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81665 212 303 4.45E-7 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 369 602 1.4E-45 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 326 2.7E-29 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PANTHER PTHR24093 34 587 4.1E-298 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PANTHER PTHR24093 625 676 4.1E-298 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:3.40.1110.10 320 442 2.6E-42 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Pfam PF00122 E1-E2 ATPase 72 300 2.3E-39 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 680 39.744 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 ProSitePatterns PS01229 Hypothetical cof family signature 2. 516 538 - T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:2.70.150.10 120 212 1.8E-22 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PANTHER PTHR24093:SF49 34 587 4.1E-298 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PANTHER PTHR24093:SF49 625 676 4.1E-298 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF81653 121 211 1.57E-21 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF56784 297 321 9.74E-41 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF56784 435 559 9.74E-41 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 SUPERFAMILY SSF56784 357 407 9.74E-41 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 9.0E-24 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 9.0E-24 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 9.0E-24 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 9.0E-24 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 9.0E-24 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 530 9.8E-33 T 22-04-2016 TMO_RS02300 67ae9dc23a0c39867aaae44240951506 682 Gene3D G3DSA:3.40.50.1000 443 563 5.9E-38 T 22-04-2016 IPR023214 HAD-like domain TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 SUPERFAMILY SSF46785 148 225 5.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 SMART SM00100 12 133 2.1E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 2.0E-18 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 SUPERFAMILY SSF51206 12 141 6.28E-33 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 Gene3D G3DSA:1.10.10.10 148 225 9.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 Gene3D G3DSA:2.60.120.10 14 141 9.0E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 SMART SM00419 169 217 7.3E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 PANTHER PTHR24567:SF30 12 226 4.1E-51 T 22-04-2016 TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 PANTHER PTHR24567 12 226 4.1E-51 T 22-04-2016 TMO_RS01200 27c2dd8e970f9d179a0725d220d837e2 227 Pfam PF00027 Cyclic nucleotide-binding domain 30 118 4.7E-22 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS03280 4e3aa3299be62a926cbeded6edbfa400 156 SUPERFAMILY SSF47413 62 102 4.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS03280 4e3aa3299be62a926cbeded6edbfa400 156 Pfam PF01381 Helix-turn-helix 65 102 9.6E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS03280 4e3aa3299be62a926cbeded6edbfa400 156 SMART SM00530 64 122 5.9E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS03280 4e3aa3299be62a926cbeded6edbfa400 156 Gene3D G3DSA:1.10.260.40 62 109 2.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 PIRSF PIRSF006470 2 343 5.7E-91 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 PANTHER PTHR33376 1 346 8.4E-73 T 22-04-2016 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 45 282 1.2E-59 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 327 2.8E-76 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 SUPERFAMILY SSF53850 80 129 2.78E-7 T 22-04-2016 TMO_RS02835 cce7126c6b85fef0a3c5af85921a2629 346 SUPERFAMILY SSF53850 161 269 2.78E-7 T 22-04-2016 TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 PANTHER PTHR11751 9 94 3.0E-22 T 22-04-2016 TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 SMART SM00345 10 68 4.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 Gene3D G3DSA:1.20.120.530 72 211 3.5E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 SUPERFAMILY SSF46785 6 72 2.42E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 Gene3D G3DSA:1.10.10.10 6 69 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 Pfam PF07729 FCD domain 78 200 1.7E-20 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 SUPERFAMILY SSF48008 75 210 1.2E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS01375 ffc75ccd050237399107c1c7c24771ff 214 SMART SM00895 78 202 8.8E-15 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 PANTHER PTHR11587 4 403 2.1E-239 T 22-04-2016 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 395 3.0E-146 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 Gene3D G3DSA:3.90.1260.10 179 400 2.5E-100 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 Pfam PF00764 Arginosuccinate synthase 9 395 1.8E-159 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 PANTHER PTHR11587:SF2 4 403 2.1E-239 T 22-04-2016 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 Gene3D G3DSA:3.40.50.620 6 171 1.3E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 402 54.434 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 SUPERFAMILY SSF69864 176 400 2.35E-94 T 22-04-2016 TMO_RS15650 2b833479626097a0cddd748a53a04c5b 404 SUPERFAMILY SSF52402 6 170 3.09E-49 T 22-04-2016 TMO_RS00700 d3affc8efc9af4e57774d10ed876fe2d 240 PANTHER PTHR10434 1 226 8.2E-42 T 22-04-2016 TMO_RS00700 d3affc8efc9af4e57774d10ed876fe2d 240 Gene3D G3DSA:3.40.1130.10 68 190 2.1E-15 T 22-04-2016 TMO_RS00700 d3affc8efc9af4e57774d10ed876fe2d 240 Pfam PF01553 Acyltransferase 56 182 9.0E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 TMO_RS00700 d3affc8efc9af4e57774d10ed876fe2d 240 SMART SM00563 70 185 9.1E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 TMO_RS00700 d3affc8efc9af4e57774d10ed876fe2d 240 SUPERFAMILY SSF69593 7 226 4.18E-37 T 22-04-2016 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 Gene3D G3DSA:1.10.10.10 108 168 1.4E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 PANTHER PTHR30173 12 167 1.1E-37 T 22-04-2016 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 Pfam PF08281 Sigma-70, region 4 115 166 1.1E-15 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 SUPERFAMILY SSF88659 88 171 6.73E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 Pfam PF04542 Sigma-70 region 2 16 82 4.9E-10 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 167 9.9E-23 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 SUPERFAMILY SSF88946 15 92 3.53E-13 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 Gene3D G3DSA:1.10.1740.10 14 80 3.1E-12 T 22-04-2016 TMO_RS06545 7273008225b8ac707397c32c84d29d9a 189 PANTHER PTHR30173:SF30 12 167 1.1E-37 T 22-04-2016 TMO_RS13845 aa10f89704b2cf34351a9b1fe14ae895 208 Hamap MF_00052_B Ribonuclease HII [rnhB]. 6 187 34.105 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 TMO_RS13845 aa10f89704b2cf34351a9b1fe14ae895 208 PANTHER PTHR10954 6 191 6.3E-67 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 TMO_RS13845 aa10f89704b2cf34351a9b1fe14ae895 208 Gene3D G3DSA:3.30.420.10 7 148 2.6E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS13845 aa10f89704b2cf34351a9b1fe14ae895 208 Pfam PF01351 Ribonuclease HII 8 185 7.5E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain TMO_RS13845 aa10f89704b2cf34351a9b1fe14ae895 208 SUPERFAMILY SSF53098 5 193 1.05E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 SMART SM00382 51 243 0.0043 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 SUPERFAMILY SSF52540 27 265 2.13E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 PANTHER PTHR24220 28 267 3.9E-121 T 22-04-2016 TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Pfam PF00005 ABC transporter 42 196 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 PANTHER PTHR24220:SF366 28 267 3.9E-121 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Gene3D G3DSA:3.40.50.300 26 260 2.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 245 266 1.1E-5 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS08670 cf033c227dd5c22b3cf18cb5aa7f61fb 267 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 26 267 9.3E-115 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PIRSF PIRSF000077 1 106 7.6E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 30 39 1.1E-9 T 22-04-2016 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 22 30 1.1E-9 T 22-04-2016 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PRINTS PR00421 Thioredoxin family signature 70 81 1.1E-9 T 22-04-2016 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PANTHER PTHR10438:SF256 1 99 4.7E-40 T 22-04-2016 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 Pfam PF00085 Thioredoxin 3 103 4.0E-35 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 Gene3D G3DSA:3.40.30.10 3 105 4.5E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 PANTHER PTHR10438 1 99 4.7E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 105 4.5E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS16345 d4f53800b4a9c02dfd68a3385101a3b6 107 SUPERFAMILY SSF52833 3 106 8.42E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS06410 b4dd23b0405a3881a05d176b2b23046d 358 Gene3D G3DSA:3.40.190.10 153 217 7.6E-4 T 22-04-2016 TMO_RS06410 b4dd23b0405a3881a05d176b2b23046d 358 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 269 1.0E-22 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS06410 b4dd23b0405a3881a05d176b2b23046d 358 SUPERFAMILY SSF53850 151 265 5.05E-7 T 22-04-2016 TMO_RS06410 b4dd23b0405a3881a05d176b2b23046d 358 PANTHER PTHR33376 1 270 3.5E-22 T 22-04-2016 TMO_RS15830 f8b6b3e49cbdd5ba249ec984569b7597 226 SUPERFAMILY SSF89392 56 220 2.55E-34 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX TMO_RS15830 f8b6b3e49cbdd5ba249ec984569b7597 226 PANTHER PTHR35869 24 219 5.9E-20 T 22-04-2016 TMO_RS15830 f8b6b3e49cbdd5ba249ec984569b7597 226 Gene3D G3DSA:2.50.20.10 56 220 2.3E-30 T 22-04-2016 TMO_RS15830 f8b6b3e49cbdd5ba249ec984569b7597 226 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 65 219 2.2E-28 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 Pfam PF05343 M42 glutamyl aminopeptidase 66 354 8.8E-66 T 22-04-2016 IPR008007 Peptidase M42 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 SUPERFAMILY SSF101821 91 203 5.8E-26 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 Gene3D G3DSA:3.40.630.10 21 90 5.3E-48 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 Gene3D G3DSA:3.40.630.10 187 359 5.3E-48 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 SUPERFAMILY SSF53187 191 360 3.87E-45 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 SUPERFAMILY SSF53187 23 96 3.87E-45 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 PANTHER PTHR32481 20 373 1.9E-132 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 21 362 1.3E-166 T 22-04-2016 IPR017537 Peptidase M42, hydrolase TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 PANTHER PTHR32481:SF7 20 373 1.9E-132 T 22-04-2016 TMO_RS12605 f0f85f08a00d7568a4c43bff63ef3962 407 Gene3D G3DSA:2.40.30.40 91 186 2.4E-24 T 22-04-2016 IPR023367 Peptidase M42, domain 2 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 Pfam PF00471 Ribosomal protein L33 7 53 3.5E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 SUPERFAMILY SSF57829 2 53 3.24E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 PANTHER PTHR15238 1 55 1.3E-23 T 22-04-2016 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 4.5E-25 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS12880 6a579b7a18eab80cbcc8dc2fd59a8e9d 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 53 14.531 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14330 57f8a89bbb7967f53e22141375755631 284 SUPERFAMILY SSF161098 4 276 1.96E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14330 57f8a89bbb7967f53e22141375755631 284 PANTHER PTHR30193:SF10 1 279 1.3E-74 T 22-04-2016 TMO_RS14330 57f8a89bbb7967f53e22141375755631 284 PANTHER PTHR30193 1 279 1.3E-74 T 22-04-2016 TMO_RS14330 57f8a89bbb7967f53e22141375755631 284 Gene3D G3DSA:1.10.3720.10 4 273 9.5E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14330 57f8a89bbb7967f53e22141375755631 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 280 1.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS20820 9e030ef498298adf46917560896d791c 389 SMART SM00382 222 353 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS20820 9e030ef498298adf46917560896d791c 389 Pfam PF11638 DnaA N-terminal domain 29 90 2.4E-21 T 22-04-2016 IPR024633 DnaA N-terminal domain TMO_RS20820 9e030ef498298adf46917560896d791c 389 SUPERFAMILY SSF52540 190 386 1.57E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS20820 9e030ef498298adf46917560896d791c 389 PANTHER PTHR30050:SF2 26 128 2.0E-123 T 22-04-2016 TMO_RS20820 9e030ef498298adf46917560896d791c 389 PANTHER PTHR30050:SF2 188 389 2.0E-123 T 22-04-2016 TMO_RS20820 9e030ef498298adf46917560896d791c 389 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 31 388 2.0E-107 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS20820 9e030ef498298adf46917560896d791c 389 PANTHER PTHR30050 188 389 2.0E-123 T 22-04-2016 TMO_RS20820 9e030ef498298adf46917560896d791c 389 Pfam PF00308 Bacterial dnaA protein 190 388 3.4E-81 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA TMO_RS20820 9e030ef498298adf46917560896d791c 389 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 287 301 1.9E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS20820 9e030ef498298adf46917560896d791c 389 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 269 1.9E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS20820 9e030ef498298adf46917560896d791c 389 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 321 348 1.9E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS20820 9e030ef498298adf46917560896d791c 389 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 223 243 1.9E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS20820 9e030ef498298adf46917560896d791c 389 Gene3D G3DSA:3.40.50.300 186 354 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS20820 9e030ef498298adf46917560896d791c 389 Gene3D G3DSA:1.10.8.60 357 389 3.2E-6 T 22-04-2016 TMO_RS20820 9e030ef498298adf46917560896d791c 389 PANTHER PTHR30050 26 128 2.0E-123 T 22-04-2016 TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 Gene3D G3DSA:3.40.50.300 33 213 2.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 PANTHER PTHR11649 23 219 2.9E-54 T 22-04-2016 TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 29 213 26.821 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 SUPERFAMILY SSF52540 36 215 1.53E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 Pfam PF01926 50S ribosome-binding GTPase 43 161 6.1E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS13670 0b3dffce71f4b735e75f4a33d132ee11 220 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 25 209 3.8E-68 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 TMO_RS01775 caaf9c444a651e33584739695520031d 293 PANTHER PTHR30349:SF5 1 293 6.3E-80 T 22-04-2016 TMO_RS01775 caaf9c444a651e33584739695520031d 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 287 24.866 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD TMO_RS01775 caaf9c444a651e33584739695520031d 293 SUPERFAMILY SSF47823 2 85 4.32E-19 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal TMO_RS01775 caaf9c444a651e33584739695520031d 293 PANTHER PTHR30349 1 293 6.3E-80 T 22-04-2016 TMO_RS01775 caaf9c444a651e33584739695520031d 293 Gene3D G3DSA:1.10.443.10 98 280 2.1E-49 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS01775 caaf9c444a651e33584739695520031d 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 76 4.1E-13 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 TMO_RS01775 caaf9c444a651e33584739695520031d 293 Gene3D G3DSA:1.10.150.130 2 85 1.9E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal TMO_RS01775 caaf9c444a651e33584739695520031d 293 Pfam PF00589 Phage integrase family 98 273 3.8E-38 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS01775 caaf9c444a651e33584739695520031d 293 SUPERFAMILY SSF56349 93 285 2.15E-49 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_RS02795 5def92c1b6a625a73db216405649671d 233 SUPERFAMILY SSF47616 96 219 8.42E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS02795 5def92c1b6a625a73db216405649671d 233 PANTHER PTHR11260 6 217 4.8E-12 T 22-04-2016 TMO_RS02795 5def92c1b6a625a73db216405649671d 233 Gene3D G3DSA:3.40.30.10 8 98 2.9E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS02795 5def92c1b6a625a73db216405649671d 233 Gene3D G3DSA:1.20.1050.10 99 209 1.3E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS02795 5def92c1b6a625a73db216405649671d 233 SUPERFAMILY SSF52833 5 93 1.19E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS02795 5def92c1b6a625a73db216405649671d 233 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 90 8.6E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 SUPERFAMILY SSF49503 126 258 4.48E-56 T 22-04-2016 IPR008972 Cupredoxin TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 40 256 7.9E-62 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 Gene3D G3DSA:2.60.40.420 117 260 1.9E-59 T 22-04-2016 IPR008972 Cupredoxin TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 Gene3D G3DSA:1.10.287.90 30 116 4.4E-30 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PANTHER PTHR22888 29 275 1.9E-107 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 192 240 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 SUPERFAMILY SSF81464 28 121 1.42E-28 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 246 2.4E-55 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 29 116 1.0E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 229 246 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 167 188 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 191 211 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 211 228 2.3E-57 T 22-04-2016 TMO_RS14185 e66dd227423cfd8382131dc06c496269 279 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 2.3E-57 T 22-04-2016 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 SUPERFAMILY SSF56524 32 216 1.12E-61 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 Gene3D G3DSA:3.90.420.10 33 214 5.8E-55 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 PANTHER PTHR19372 29 216 1.2E-65 T 22-04-2016 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 PRINTS PR00407 Eukaryotic molybdopterin domain signature 144 160 7.0E-5 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 PRINTS PR00407 Eukaryotic molybdopterin domain signature 177 190 7.0E-5 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 PRINTS PR00407 Eukaryotic molybdopterin domain signature 161 174 7.0E-5 T 22-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS07975 7174124c14f0eb962363dff7bf19a670 216 Pfam PF00174 Oxidoreductase molybdopterin binding domain 55 198 4.5E-37 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 TMO_RS03945 85997eef6346941c08118f3f85f56625 236 Gene3D G3DSA:2.40.50.90 24 140 8.9E-25 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS03945 85997eef6346941c08118f3f85f56625 236 SMART SM00318 17 140 3.2E-26 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS03945 85997eef6346941c08118f3f85f56625 236 SUPERFAMILY SSF50199 24 147 9.81E-35 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS03945 85997eef6346941c08118f3f85f56625 236 PANTHER PTHR12302 24 150 4.0E-32 T 22-04-2016 TMO_RS03945 85997eef6346941c08118f3f85f56625 236 Pfam PF00565 Staphylococcal nuclease homologue 37 139 3.4E-19 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PIRSF PIRSF000094 5 263 3.0E-111 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS04940 b0644116b08576559285df895d4ff32a 270 Gene3D G3DSA:3.40.50.720 10 204 1.2E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PANTHER PTHR24322:SF317 15 146 2.3E-54 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PANTHER PTHR24322:SF317 162 194 2.3E-54 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS04940 b0644116b08576559285df895d4ff32a 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 9.4E-89 T 22-04-2016 TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PANTHER PTHR24322 15 146 2.3E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 PANTHER PTHR24322 162 194 2.3E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04940 b0644116b08576559285df895d4ff32a 270 SUPERFAMILY SSF51735 10 259 1.48E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 Gene3D G3DSA:1.10.357.10 79 215 4.4E-54 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 Pfam PF08362 YcdC-like protein, C-terminal region 74 216 2.9E-53 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 SUPERFAMILY SSF48498 91 216 1.13E-41 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 PANTHER PTHR30055 9 178 3.0E-48 T 22-04-2016 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 72 1.4E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 Gene3D G3DSA:1.10.10.60 57 78 1.3E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 Gene3D G3DSA:1.10.10.60 13 56 9.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 SUPERFAMILY SSF46689 13 94 2.34E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 PANTHER PTHR30055:SF53 9 178 3.0E-48 T 22-04-2016 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04340 b008866c1dc0a2da7459751acb374352 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.1E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 PANTHER PTHR30477 171 348 8.9E-65 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 PANTHER PTHR30477 14 123 8.9E-65 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 PANTHER PTHR30477:SF1 171 348 8.9E-65 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 PANTHER PTHR30477:SF1 14 123 8.9E-65 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 240 350 8.0E-27 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 SUPERFAMILY SSF53807 176 350 3.49E-73 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 SUPERFAMILY SSF53807 31 119 3.49E-73 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 17 162 8.2E-24 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 Gene3D G3DSA:3.40.50.1980 163 223 2.2E-16 T 22-04-2016 TMO_RS06965 593dd926d1d36ea14926565e774c5792 354 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 349 1.8E-63 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_RS16945 6d99794fa3c22f3a9ac700ecaeafac99 142 PANTHER PTHR21256 10 116 2.1E-58 T 22-04-2016 TMO_RS16945 6d99794fa3c22f3a9ac700ecaeafac99 142 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 14 117 31.21 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 TMO_RS16945 6d99794fa3c22f3a9ac700ecaeafac99 142 SUPERFAMILY SSF141734 16 121 2.88E-47 T 22-04-2016 TMO_RS16945 6d99794fa3c22f3a9ac700ecaeafac99 142 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 63 116 1.0E-16 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 TMO_RS16945 6d99794fa3c22f3a9ac700ecaeafac99 142 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 40 113 3.0E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.30.9.10 136 190 2.3E-11 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.30.9.10 272 359 2.3E-11 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 PANTHER PTHR13847:SF148 107 419 2.8E-120 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF54373 272 362 1.16E-13 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 2 55 2.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 191 271 2.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 362 419 2.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Gene3D G3DSA:3.50.50.60 108 122 2.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF51905 107 272 6.47E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF51905 2 54 6.47E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 SUPERFAMILY SSF51905 362 418 6.47E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 PANTHER PTHR13847 1 67 2.8E-120 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 PANTHER PTHR13847 107 419 2.8E-120 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 PANTHER PTHR13847:SF148 1 67 2.8E-120 T 22-04-2016 TMO_RS04780 12fbcd1e80d499cbf8ee32f96edd42f5 420 Pfam PF01266 FAD dependent oxidoreductase 2 400 7.6E-62 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 Pfam PF00117 Glutamine amidotransferase class-I 15 202 3.4E-19 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 211 8.6E-57 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 PANTHER PTHR21235 2 212 4.7E-74 T 22-04-2016 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 SUPERFAMILY SSF52317 3 212 6.95E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS16930 68ff18356731153a92df6831fe165be9 214 PIRSF PIRSF000495 1 214 1.6E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 PANTHER PTHR21235:SF1 2 212 4.7E-74 T 22-04-2016 TMO_RS16930 68ff18356731153a92df6831fe165be9 214 Gene3D G3DSA:3.40.50.880 1 212 9.9E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS16930 68ff18356731153a92df6831fe165be9 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 212 32.606 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 Pfam PF00501 AMP-binding enzyme 46 387 6.7E-73 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 Gene3D G3DSA:3.40.50.980 37 199 1.4E-37 T 22-04-2016 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 Gene3D G3DSA:3.40.50.980 200 366 6.7E-40 T 22-04-2016 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 PANTHER PTHR24096 10 378 2.2E-97 T 22-04-2016 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 PANTHER PTHR24096:SF240 10 378 2.2E-97 T 22-04-2016 TMO_RS04075 e4bc3d2a3293ce1ff4cb912ea4960161 391 SUPERFAMILY SSF56801 29 387 1.44E-83 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:3.40.190.10 170 266 1.3E-23 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 SUPERFAMILY SSF53850 87 296 1.7E-39 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Pfam PF03466 LysR substrate binding domain 92 296 2.9E-20 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:3.40.190.10 271 298 7.0E-25 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:3.40.190.10 87 169 7.0E-25 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 Gene3D G3DSA:1.10.10.10 2 81 8.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 PANTHER PTHR30118 4 301 2.3E-84 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 PANTHER PTHR30118:SF4 4 301 2.3E-84 T 22-04-2016 TMO_RS17335 320c6e211af960f93ed7447857d2c028 302 SUPERFAMILY SSF46785 1 81 2.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 SUPERFAMILY SSF48557 2 456 2.2E-134 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.10.275.10 4 141 4.3E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.20.200.10 142 419 3.8E-86 T 22-04-2016 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 Pfam PF10415 Fumarase C C-terminus 410 457 2.6E-12 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 1.8E-29 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 1.8E-29 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 1.8E-29 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 1.8E-29 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 Pfam PF00206 Lyase 13 344 1.1E-93 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 5.6E-5 T 22-04-2016 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 136 158 5.6E-5 T 22-04-2016 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 5.6E-5 T 22-04-2016 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PANTHER PTHR11444:SF25 1 439 3.8E-211 T 22-04-2016 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 PANTHER PTHR11444 1 439 3.8E-211 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_RS04480 a4e431061f9563d7987c33598a2d705e 457 Gene3D G3DSA:1.10.40.30 420 457 1.1E-12 T 22-04-2016 TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 Pfam PF13463 Winged helix DNA-binding domain 36 100 2.0E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 SMART SM00347 28 127 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 Gene3D G3DSA:1.10.10.10 5 142 5.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 PANTHER PTHR33164 5 151 2.0E-12 T 22-04-2016 TMO_RS08130 8b6c104ac5d50fbca168862edeea4809 151 SUPERFAMILY SSF46785 5 143 7.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01380 07eb02f5276c2a98cc268223e0d08d83 259 SMART SM01007 19 203 1.9E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01380 07eb02f5276c2a98cc268223e0d08d83 259 Gene3D G3DSA:3.40.225.10 16 230 7.6E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01380 07eb02f5276c2a98cc268223e0d08d83 259 PANTHER PTHR10672 17 250 2.7E-102 T 22-04-2016 TMO_RS01380 07eb02f5276c2a98cc268223e0d08d83 259 SUPERFAMILY SSF53639 16 223 8.63E-62 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01380 07eb02f5276c2a98cc268223e0d08d83 259 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 203 6.8E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS04195 e01c8f93ca2a1377c4d90281e41ca9a6 87 PANTHER PTHR33713:SF6 1 82 2.8E-15 T 22-04-2016 TMO_RS04195 e01c8f93ca2a1377c4d90281e41ca9a6 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 1.5E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS04195 e01c8f93ca2a1377c4d90281e41ca9a6 87 SUPERFAMILY SSF143120 1 81 6.8E-15 T 22-04-2016 TMO_RS04195 e01c8f93ca2a1377c4d90281e41ca9a6 87 PANTHER PTHR33713 1 82 2.8E-15 T 22-04-2016 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 PANTHER PTHR30465:SF0 191 334 1.2E-147 T 22-04-2016 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 PANTHER PTHR30465:SF0 1 169 1.2E-147 T 22-04-2016 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 Gene3D G3DSA:1.10.3720.10 200 329 8.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 Gene3D G3DSA:1.10.3720.10 90 163 8.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 SUPERFAMILY SSF161098 197 319 4.25E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 SUPERFAMILY SSF161098 92 160 4.25E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 PANTHER PTHR30465 191 334 1.2E-147 T 22-04-2016 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 PANTHER PTHR30465 1 169 1.2E-147 T 22-04-2016 TMO_RS15210 500c738fcb65d9167144c7c5bcd89514 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 1.9E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.970 370 568 2.4E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.970 13 184 6.0E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Gene3D G3DSA:3.40.50.1220 209 362 7.0E-33 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 182 6.4E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 414 561 3.7E-43 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 450 469 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52467 165 175 1.7E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52467 202 380 1.7E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 PANTHER PTHR18968 14 568 1.8E-131 T 22-04-2016 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52518 10 182 2.25E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 SUPERFAMILY SSF52518 393 568 2.14E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 PANTHER PTHR18968:SF120 14 568 1.8E-131 T 22-04-2016 TMO_RS03070 40e07222769c45e8c3d142ead7f082ae 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 215 353 7.9E-24 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 Pfam PF03070 TENA/THI-4/PQQC family 14 222 5.0E-51 T 22-04-2016 IPR004305 Thiaminase-2/PQQC TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 PANTHER PTHR40279:SF2 5 246 2.4E-111 T 22-04-2016 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 PANTHER PTHR40279 5 246 2.4E-111 T 22-04-2016 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 247 112.348 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 Gene3D G3DSA:1.20.910.10 3 241 2.5E-92 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 241 1.6E-104 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 TMO_RS15685 2fb5bf038abeb2095af1d2a85e58d35f 247 SUPERFAMILY SSF48613 3 242 3.95E-60 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 Gene3D G3DSA:2.160.10.10 8 181 5.2E-35 T 22-04-2016 TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 0.0017 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 79 111 2.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 PANTHER PTHR13061:SF8 5 179 2.8E-51 T 22-04-2016 TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 PANTHER PTHR13061 5 179 2.8E-51 T 22-04-2016 TMO_RS02695 de56cd5ebb72c7c0dd594842a424b895 186 SUPERFAMILY SSF51161 7 142 2.63E-31 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 PANTHER PTHR10245:SF49 6 85 5.1E-14 T 22-04-2016 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 PIRSF PIRSF019251 1 479 2.5E-190 T 22-04-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 SMART SM00530 9 64 2.7E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 318 474 5.6E-74 T 22-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 PANTHER PTHR10245 6 85 5.1E-14 T 22-04-2016 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 SUPERFAMILY SSF47413 4 69 2.95E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 Pfam PF06114 Domain of unknown function (DUF955) 210 317 2.8E-15 T 22-04-2016 IPR010359 HTH domain, IrrE-type TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 Pfam PF01381 Helix-turn-helix 10 62 3.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS12130 e9025cf88193ca44f583d83b186dff5f 479 Gene3D G3DSA:1.10.260.40 5 74 2.4E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:3.40.190.10 193 240 3.5E-6 T 22-04-2016 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 SUPERFAMILY SSF46785 3 112 1.59E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 PANTHER PTHR30579 1 246 1.9E-79 T 22-04-2016 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 PANTHER PTHR30579:SF6 1 246 1.9E-79 T 22-04-2016 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 Pfam PF03466 LysR substrate binding domain 90 265 2.0E-21 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 SUPERFAMILY SSF53850 90 280 2.95E-22 T 22-04-2016 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:3.40.190.10 87 192 1.5E-14 T 22-04-2016 TMO_RS08765 1c3c1c325d45c4494c962cda8bc07a7e 282 Gene3D G3DSA:1.10.10.10 4 86 8.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29165 dc75f6b6b56b2309c8f12a2a5b836c44 233 PANTHER PTHR30055 5 181 9.6E-14 T 22-04-2016 TMO_RS29165 dc75f6b6b56b2309c8f12a2a5b836c44 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 69 1.2E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29165 dc75f6b6b56b2309c8f12a2a5b836c44 233 Gene3D G3DSA:1.10.357.10 7 198 4.1E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS29165 dc75f6b6b56b2309c8f12a2a5b836c44 233 SUPERFAMILY SSF46689 10 87 7.48E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PANTHER PTHR11946 7 515 1.1E-240 T 22-04-2016 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:2.170.220.10 118 224 6.2E-43 T 22-04-2016 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 150 508 1.2E-106 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 223 234 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 256 271 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PRINTS PR01041 Methionyl-tRNA synthetase signature 348 359 4.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:3.40.50.620 5 115 1.0E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:3.40.50.620 225 336 1.0E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 SUPERFAMILY SSF47323 349 508 4.11E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Pfam PF09334 tRNA synthetases class I (M) 148 361 1.0E-66 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 PANTHER PTHR11946:SF1 7 515 1.1E-240 T 22-04-2016 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 5 65 3.4E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 507 47.462 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 Gene3D G3DSA:1.10.730.10 339 508 1.2E-51 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS08445 b88405cf566ff7c15ddb6882f379afe9 516 SUPERFAMILY SSF52374 6 347 1.18E-112 T 22-04-2016 TMO_RS12925 b95aaf175703c84e1f0b1ac93e312623 358 SUPERFAMILY SSF55909 7 326 1.61E-36 T 22-04-2016 TMO_RS12925 b95aaf175703c84e1f0b1ac93e312623 358 PANTHER PTHR31377:SF0 152 343 9.3E-20 T 22-04-2016 TMO_RS12925 b95aaf175703c84e1f0b1ac93e312623 358 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 23 326 3.1E-30 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_RS12925 b95aaf175703c84e1f0b1ac93e312623 358 PANTHER PTHR31377 152 343 9.3E-20 T 22-04-2016 TMO_RS12925 b95aaf175703c84e1f0b1ac93e312623 358 Gene3D G3DSA:3.75.10.10 16 326 8.1E-35 T 22-04-2016 TMO_RS02770 b692040a6192ab979db115b622099f2d 196 PANTHER PTHR33711 4 180 8.3E-48 T 22-04-2016 TMO_RS02770 b692040a6192ab979db115b622099f2d 196 PANTHER PTHR33711:SF3 4 180 8.3E-48 T 22-04-2016 TMO_RS02770 b692040a6192ab979db115b622099f2d 196 Pfam PF00775 Dioxygenase 55 169 1.8E-21 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_RS02770 b692040a6192ab979db115b622099f2d 196 SUPERFAMILY SSF49482 34 193 4.06E-48 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS02770 b692040a6192ab979db115b622099f2d 196 Gene3D G3DSA:2.60.130.10 36 175 1.9E-47 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 Gene3D G3DSA:1.20.1290.10 1 173 1.3E-56 T 22-04-2016 IPR029032 AhpD-like TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 96 175 6.8E-14 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 177 83.496 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 SUPERFAMILY SSF69118 3 175 1.2E-47 T 22-04-2016 IPR029032 AhpD-like TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 TIGRFAM TIGR00777 ahpD: alkylhydroperoxidase, AhpD family 2 176 8.3E-76 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS12590 a8f976a19622d964514302ce6dc2dec4 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 112 160 3.2E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 PANTHER PTHR12001:SF23 14 290 8.8E-94 T 22-04-2016 TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 SUPERFAMILY SSF48576 38 297 5.76E-78 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 227 239 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 Gene3D G3DSA:1.10.600.10 14 306 9.2E-88 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 PANTHER PTHR12001 14 290 8.8E-94 T 22-04-2016 IPR017446 Polyprenyl synthetase-related TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 Pfam PF00348 Polyprenyl synthetase 43 278 8.3E-52 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 TMO_RS04850 f4460bb73aa4c74e08f5fb1e6c971a9d 308 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 93 109 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:1.10.3850.10 792 1005 3.2E-56 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82693 267 321 1.92E-17 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82693 137 181 1.92E-17 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82866 296 488 9.29E-49 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82714 183 264 4.05E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:3.30.70.1430 557 650 7.5E-9 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82693 43 131 5.76E-23 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82714 699 784 2.09E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PANTHER PTHR32063:SF28 1 1006 0.0 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 8.6E-72 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:3.30.70.1430 43 140 8.3E-26 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:3.30.2090.10 183 267 1.0E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:3.30.2090.10 698 787 1.8E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 1.0E-263 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 Gene3D G3DSA:1.20.1640.10 290 493 2.4E-54 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82866 784 1005 3.14E-43 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 PANTHER PTHR32063 1 1006 0.0 T 22-04-2016 TMO_RS17720 332ccadebf7f27ea14ad9ebb308522c8 1006 SUPERFAMILY SSF82693 553 650 5.93E-14 T 22-04-2016 TMO_RS15645 ee16ca848fc3158c4257e5b87dcff5fe 471 Gene3D G3DSA:3.30.360.30 164 471 1.7E-131 T 22-04-2016 IPR023181 Homospermidine synthase-like, domain KEGG: 00960+2.5.1.44 TMO_RS15645 ee16ca848fc3158c4257e5b87dcff5fe 471 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 12 150 1.3E-32 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 TMO_RS15645 ee16ca848fc3158c4257e5b87dcff5fe 471 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 154 437 6.3E-26 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal TMO_RS15645 ee16ca848fc3158c4257e5b87dcff5fe 471 Gene3D G3DSA:3.40.50.720 2 163 4.2E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55785 347 471 5.48E-12 T 22-04-2016 IPR000014 PAS domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00388 479 547 3.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 357 475 1.9E-6 T 22-04-2016 IPR000014 PAS domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF47384 464 548 2.16E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF00512 His Kinase A (phospho-acceptor) domain 480 547 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.565.10 599 707 4.3E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 8.7E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 116 130 8.7E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 686 8.7E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.450.20 220 344 2.0E-10 T 22-04-2016 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.450.20 348 472 2.7E-13 T 22-04-2016 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:3.30.565.10 533 598 4.9E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 PANTHER PTHR24423 341 707 1.7E-31 T 22-04-2016 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 PANTHER PTHR24423 70 93 1.7E-31 T 22-04-2016 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF13426 PAS domain 364 472 7.6E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55785 219 299 1.6E-6 T 22-04-2016 IPR000014 PAS domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SUPERFAMILY SSF55874 537 706 6.59E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Gene3D G3DSA:1.10.287.130 473 532 5.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 Pfam PF12860 PAS fold 234 349 3.2E-6 T 22-04-2016 TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00091 353 419 1.7E-10 T 22-04-2016 IPR000014 PAS domain TMO_RS09275 a2a88c4f12102407cb57b52a0bcaf8c4 709 SMART SM00091 228 297 9.4 T 22-04-2016 IPR000014 PAS domain TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 SUPERFAMILY SSF46785 8 118 5.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 PANTHER PTHR30537 2 306 3.1E-56 T 22-04-2016 TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 Gene3D G3DSA:1.10.10.10 9 91 1.8E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 PANTHER PTHR30537:SF3 2 306 3.1E-56 T 22-04-2016 TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 Pfam PF03466 LysR substrate binding domain 94 289 1.1E-23 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 SUPERFAMILY SSF53850 94 291 1.0E-27 T 22-04-2016 TMO_RS16915 c94cf12df1149a28e380bb645287288f 307 Gene3D G3DSA:3.40.190.10 98 190 7.9E-14 T 22-04-2016 TMO_RS06260 526fbc7af799fbf491b775051290a756 255 PANTHER PTHR30433:SF2 2 251 2.2E-91 T 22-04-2016 IPR022522 Flagellar motor stator, MotA TMO_RS06260 526fbc7af799fbf491b775051290a756 255 PANTHER PTHR30433 2 251 2.2E-91 T 22-04-2016 TMO_RS06260 526fbc7af799fbf491b775051290a756 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 214 3.0E-21 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS06260 526fbc7af799fbf491b775051290a756 255 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 353 54.519 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 355 1.1E-144 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 PANTHER PTHR21148 2 355 1.6E-156 T 22-04-2016 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 Gene3D G3DSA:3.20.20.105 3 356 8.8E-155 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 357 3.8E-149 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 Pfam PF01702 Queuine tRNA-ribosyltransferase 122 355 1.3E-84 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 PANTHER PTHR21148:SF26 2 355 1.6E-156 T 22-04-2016 TMO_RS07905 238d0f4cb0ab8a8669ea6c7792a67247 367 SUPERFAMILY SSF51713 2 356 2.62E-153 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 PANTHER PTHR11918:SF43 3 441 1.5E-176 T 22-04-2016 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF00919 Uncharacterized protein family UPF0004 4 102 4.1E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 SMART SM00729 145 370 4.5E-58 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 SUPERFAMILY SSF102114 124 375 7.72E-63 T 22-04-2016 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 1.0E-148 T 22-04-2016 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF04055 Radical SAM superfamily 151 328 5.6E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 PANTHER PTHR11918 3 441 1.5E-176 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 439 3.6E-145 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 Pfam PF01938 TRAM domain 382 441 3.2E-9 T 22-04-2016 IPR002792 TRAM domain TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 443 71.898 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 Gene3D G3DSA:3.80.30.20 144 382 8.6E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS17785 7d36b09ea853fd7703559457618e6e0f 467 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 TMO_RS10570 a29374a6f46ed6eb5ddf483ffa1c70b6 203 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 13 198 5.2E-56 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_RS10570 a29374a6f46ed6eb5ddf483ffa1c70b6 203 PIRSF PIRSF020680 5 203 9.5E-62 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_RS10570 a29374a6f46ed6eb5ddf483ffa1c70b6 203 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 12 199 1.0E-62 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 TMO_RS10570 a29374a6f46ed6eb5ddf483ffa1c70b6 203 SUPERFAMILY SSF159709 20 199 1.31E-54 T 22-04-2016 TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 PANTHER PTHR23407:SF1 8 202 5.4E-36 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 SUPERFAMILY SSF100950 17 202 5.58E-40 T 22-04-2016 TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 PANTHER PTHR23407 8 202 5.4E-36 T 22-04-2016 TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 Gene3D G3DSA:3.40.50.10420 17 202 7.0E-42 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 17 198 6.5E-30 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 17 198 2.6E-38 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_RS04510 f92d0353b695c858837efecdcc775e8e 206 PIRSF PIRSF006806 13 201 1.6E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF64586 429 507 1.08E-13 T 22-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 PANTHER PTHR11451 1 480 1.0E-201 T 22-04-2016 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.30.110.30 429 506 8.4E-17 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 SMART SM00946 433 507 4.6E-19 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF03129 Anticodon binding domain 303 400 5.0E-12 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.40.50.800 297 422 1.2E-26 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 452 507 5.9E-13 T 22-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 120 284 5.8E-16 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Gene3D G3DSA:3.30.930.10 14 296 1.1E-107 T 22-04-2016 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF52954 292 423 3.27E-22 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 13 507 1.4E-144 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 PANTHER PTHR11451:SF6 1 480 1.0E-201 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 SUPERFAMILY SSF55681 16 290 5.76E-74 T 22-04-2016 TMO_RS01355 20149152d126feb8b3e28d20f17a63b5 507 Hamap MF_01571 Proline--tRNA ligase [proS]. 11 507 41.358 T 22-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 290 369 9.9E-16 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 SUPERFAMILY SSF74653 284 354 1.07E-15 T 22-04-2016 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 292 369 5.8E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 Gene3D G3DSA:3.30.1150.10 256 370 1.9E-20 T 22-04-2016 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 306 324 2.4E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 285 306 2.4E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_RS06760 6b91159b32077c91906b0e19f74e9d7f 370 PRINTS PR01374 Gram-negative bacterial tonB protein signature 172 182 2.4E-7 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 93.258 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 Pfam PF02132 RecR protein 40 77 2.3E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 SMART SM00493 79 164 8.1E-5 T 22-04-2016 IPR006171 Toprim domain TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 Pfam PF13662 Toprim domain 80 172 3.9E-22 T 22-04-2016 IPR006171 Toprim domain TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 PANTHER PTHR30446 1 199 4.8E-89 T 22-04-2016 TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 SUPERFAMILY SSF111304 3 199 3.53E-66 T 22-04-2016 IPR023627 Recombination protein RecR TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 6.7E-62 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 TMO_RS13575 4516b27f92134027adb0001568dbdc9c 199 PANTHER PTHR30446:SF0 1 199 4.8E-89 T 22-04-2016 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF82689 176 273 4.32E-30 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 PANTHER PTHR30221:SF7 1 277 1.3E-81 T 22-04-2016 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 PANTHER PTHR30221 1 277 1.3E-81 T 22-04-2016 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 Gene3D G3DSA:2.30.30.60 125 174 1.7E-15 T 22-04-2016 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 Gene3D G3DSA:3.30.70.100 177 261 1.5E-24 T 22-04-2016 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF50182 110 174 2.16E-16 T 22-04-2016 IPR010920 LSM domain TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 SUPERFAMILY SSF82861 23 108 1.57E-18 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 TMO_RS16665 0266c3ab1f561824db7269b218c88eb4 300 Pfam PF00924 Mechanosensitive ion channel 68 264 7.6E-51 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 PANTHER PTHR13748 1 346 2.0E-139 T 22-04-2016 TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 347 1.4E-22 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 SMART SM00833 256 350 6.1E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 PANTHER PTHR13748:SF43 1 346 2.0E-139 T 22-04-2016 TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 Gene3D G3DSA:3.40.50.300 2 200 8.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 Gene3D G3DSA:3.30.1220.10 222 348 7.5E-35 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 181 1.9E-59 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 SUPERFAMILY SSF90002 256 348 1.09E-25 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS06670 6bf7c3c09fdab98a74acab6a9f505173 351 SUPERFAMILY SSF52540 2 204 1.19E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 SUPERFAMILY SSF50475 31 151 1.0E-23 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 PANTHER PTHR30212:SF4 5 193 2.9E-75 T 22-04-2016 TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 PANTHER PTHR30212 5 193 2.9E-75 T 22-04-2016 TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 123 1.7E-17 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 Gene3D G3DSA:2.30.110.10 31 148 9.8E-27 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS01540 783e585600d475eb85d680f91ae4c8bb 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 11 204 4.5E-80 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent TMO_RS08640 7aefa727c1e32d64e937e188df9b2369 239 Gene3D G3DSA:3.90.226.10 2 234 3.0E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS08640 7aefa727c1e32d64e937e188df9b2369 239 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS08640 7aefa727c1e32d64e937e188df9b2369 239 SUPERFAMILY SSF52096 3 236 9.16E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS08640 7aefa727c1e32d64e937e188df9b2369 239 PANTHER PTHR11941 3 234 5.5E-64 T 22-04-2016 TMO_RS08640 7aefa727c1e32d64e937e188df9b2369 239 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 226 4.8E-46 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 SUPERFAMILY SSF52540 2 209 3.82E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 152 1.1E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 PANTHER PTHR13696:SF54 2 207 2.7E-71 T 22-04-2016 TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 PANTHER PTHR13696 2 207 2.7E-71 T 22-04-2016 TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 PIRSF PIRSF009320 1 212 1.9E-46 T 22-04-2016 TMO_RS11105 88a4ff61269600a54663ce9749d7037a 212 Gene3D G3DSA:3.40.50.300 2 207 7.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Gene3D G3DSA:3.30.70.870 404 480 8.9E-19 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Gene3D G3DSA:3.40.50.300 10 282 7.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SMART SM00838 599 689 0.0027 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115 309 693 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115 256 284 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115 6 182 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Pfam PF00009 Elongation factor Tu GTP binding domain 13 281 4.5E-20 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Pfam PF03764 Elongation factor G, domain IV 479 596 3.1E-38 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Gene3D G3DSA:2.40.30.10 314 392 6.9E-9 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SUPERFAMILY SSF52540 9 282 1.26E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Gene3D G3DSA:3.30.70.240 599 684 4.9E-9 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SUPERFAMILY SSF54980 599 682 2.35E-9 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Pfam PF00679 Elongation factor G C-terminus 599 687 2.7E-9 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SUPERFAMILY SSF54211 479 598 2.1E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115:SF98 309 693 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115:SF98 256 284 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 PANTHER PTHR23115:SF98 6 182 1.2E-143 T 22-04-2016 TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Gene3D G3DSA:3.30.230.10 484 598 1.7E-41 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 Pfam PF14492 Elongation Factor G, domain II 404 477 6.5E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SUPERFAMILY SSF54980 405 481 2.12E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SUPERFAMILY SSF50447 266 392 1.32E-9 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS09675 c6e22b6a9edf7da19fe64b09864a991f 695 SMART SM00889 480 597 5.0E-56 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 SMART SM00448 18 130 9.6E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 Gene3D G3DSA:1.10.10.10 162 266 7.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 PANTHER PTHR26402 18 148 8.7E-45 T 22-04-2016 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 PANTHER PTHR26402 168 268 8.7E-45 T 22-04-2016 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 SMART SM00862 184 266 7.9E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 184 265 1.2E-7 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 SUPERFAMILY SSF52172 16 148 9.25E-31 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 Pfam PF00072 Response regulator receiver domain 20 130 2.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 SUPERFAMILY SSF46894 166 266 6.8E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS10365 7fad6746168b8de2f79d20b6c39d70a1 282 Gene3D G3DSA:3.40.50.2300 17 141 1.8E-31 T 22-04-2016 TMO_RS07600 1c6e9bff7b9f9246ff94b68105c3eded 274 PANTHER PTHR33969:SF2 241 266 4.3E-39 T 22-04-2016 TMO_RS07600 1c6e9bff7b9f9246ff94b68105c3eded 274 Pfam PF02616 Segregation and condensation protein ScpA 32 268 2.1E-12 T 22-04-2016 IPR003768 Segregation and condensation protein A TMO_RS07600 1c6e9bff7b9f9246ff94b68105c3eded 274 PANTHER PTHR33969:SF2 1 212 4.3E-39 T 22-04-2016 TMO_RS07600 1c6e9bff7b9f9246ff94b68105c3eded 274 PANTHER PTHR33969 1 212 4.3E-39 T 22-04-2016 TMO_RS07600 1c6e9bff7b9f9246ff94b68105c3eded 274 PANTHER PTHR33969 241 266 4.3E-39 T 22-04-2016 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 1 196 2.8E-65 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 Pfam PF00005 ABC transporter 20 159 1.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 PANTHER PTHR24220:SF508 2 205 6.8E-72 T 22-04-2016 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 PANTHER PTHR24220 2 205 6.8E-72 T 22-04-2016 TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 SMART SM00382 25 205 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 SUPERFAMILY SSF52540 2 190 7.48E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15505 5513f123c33352f35259ed42690b5b3b 208 Gene3D G3DSA:3.40.50.300 3 189 1.4E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11670 e829b713069566b5ceb4fcb9f552328b 142 Pfam PF13554 Bacteriophage related domain of unknown function 12 111 1.3E-11 T 22-04-2016 IPR025395 Protein of unknown function DUF4128 TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 SUPERFAMILY SSF53474 4 234 2.1E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 76 89 7.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 178 192 7.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 PRINTS PR00111 Alpha/beta hydrolase fold signature 62 75 7.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 Gene3D G3DSA:3.40.50.1820 5 234 1.1E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 PANTHER PTHR10992 3 234 3.5E-32 T 22-04-2016 TMO_RS10090 c741170c16e535e0f3dd6a1da4993ac8 237 Pfam PF12697 Alpha/beta hydrolase family 28 227 1.2E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS26175 02d264290b9b77183716f56a8c33d9f8 41 SUPERFAMILY SSF52374 1 41 1.5E-14 T 22-04-2016 TMO_RS26175 02d264290b9b77183716f56a8c33d9f8 41 PANTHER PTHR21299 1 41 5.3E-14 T 22-04-2016 TMO_RS26175 02d264290b9b77183716f56a8c33d9f8 41 Pfam PF02569 Pantoate-beta-alanine ligase 1 41 7.3E-14 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS26175 02d264290b9b77183716f56a8c33d9f8 41 PANTHER PTHR21299:SF1 1 41 5.3E-14 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS26175 02d264290b9b77183716f56a8c33d9f8 41 Gene3D G3DSA:3.40.50.620 1 41 5.4E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS04280 e89999657954e412773350b65d883f88 630 Gene3D G3DSA:2.30.38.10 432 509 7.7E-10 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 Gene3D G3DSA:3.30.300.30 516 620 2.0E-29 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 79 9.8E-15 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 TMO_RS04280 e89999657954e412773350b65d883f88 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 256 267 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS04280 e89999657954e412773350b65d883f88 630 Gene3D G3DSA:3.40.50.980 262 394 6.4E-22 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 PANTHER PTHR24095 10 629 1.4E-226 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 SUPERFAMILY SSF56801 21 620 3.01E-155 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 Pfam PF00501 AMP-binding enzyme 86 520 3.9E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS04280 e89999657954e412773350b65d883f88 630 Gene3D G3DSA:3.40.50.980 77 261 1.4E-39 T 22-04-2016 TMO_RS04280 e89999657954e412773350b65d883f88 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 607 1.5E-26 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Pfam PF01256 Carbohydrate kinase 252 486 8.2E-47 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 PANTHER PTHR12592 1 510 7.9E-101 T 22-04-2016 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 7 213 23.298 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Pfam PF03853 YjeF-related protein N-terminus 27 192 8.0E-39 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Gene3D G3DSA:3.40.50.10260 3 235 2.5E-61 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 PIRSF PIRSF017184 3 505 4.5E-104 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Gene3D G3DSA:3.40.1190.20 236 502 1.0E-71 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 SUPERFAMILY SSF64153 4 250 3.01E-54 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 213 4.1E-38 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 242 499 2.2E-47 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 506 19.408 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 PANTHER PTHR12592:SF0 1 510 7.9E-101 T 22-04-2016 TMO_RS10010 268281b1e61a7c3df77d6e19f6e351cc 521 SUPERFAMILY SSF53613 225 501 1.08E-53 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 Pfam PF01514 Secretory protein of YscJ/FliF family 29 217 1.8E-68 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 Pfam PF08345 Flagellar M-ring protein C-terminal 255 415 5.4E-42 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PIRSF PIRSF004862 1 568 4.8E-142 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 266 284 5.2E-35 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 193 211 5.2E-35 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 118 136 5.2E-35 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 150 164 5.2E-35 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PRINTS PR01009 Flagellar M-ring protein signature 339 363 5.2E-35 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PANTHER PTHR30046 1 568 5.2E-132 T 22-04-2016 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 31 458 2.9E-89 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 TMO_RS06280 26bee88a2bb9015f0e2695a9f5d1cf82 568 PANTHER PTHR30046:SF0 1 568 5.2E-132 T 22-04-2016 TMO_RS07260 e732fd7164baa6ec68d3543e79085219 563 Pfam PF00860 Permease family 16 387 9.4E-34 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 Pfam PF01494 FAD binding domain 3 318 2.6E-18 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 SUPERFAMILY SSF51905 2 174 7.25E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 SUPERFAMILY SSF51905 265 378 7.25E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 Gene3D G3DSA:3.50.50.60 266 354 1.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 Gene3D G3DSA:3.50.50.60 1 179 1.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 4 387 5.6E-102 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PANTHER PTHR13789 1 382 6.3E-63 T 22-04-2016 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PANTHER PTHR13789:SF5 1 382 6.3E-63 T 22-04-2016 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 2.9E-12 T 22-04-2016 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.9E-12 T 22-04-2016 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.9E-12 T 22-04-2016 TMO_RS12370 0eadad212d383cd5401cacef67963eb6 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.9E-12 T 22-04-2016 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 355 453 9.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 371 452 6.6E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 203 273 2.3E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 462 533 9.0E-14 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 375 447 1.3E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 32 100 9.0E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 288 360 9.7E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SMART SM00316 116 184 3.2E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 446 546 7.38E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 20 125 1.96E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 52 66 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 121 137 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 97 116 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 303 322 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 139 156 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 343 361 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 168 188 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 225 246 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PRINTS PR00681 Ribosomal protein S1 signature 34 52 4.7E-82 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 292 370 3.0E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 34 113 6.7E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 202 289 8.95E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 197 282 1.7E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PANTHER PTHR10724:SF6 15 527 1.1E-227 T 22-04-2016 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 268 382 1.34E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 PANTHER PTHR10724 15 527 1.1E-227 T 22-04-2016 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 16 533 1.4E-195 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 463 533 7.3E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 288 360 1.6E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 374 447 2.5E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 33 99 4.6E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 117 184 6.2E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Pfam PF00575 S1 RNA binding domain 203 273 2.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 SUPERFAMILY SSF50249 118 198 5.72E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 455 534 1.3E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16240 3a804c5e687d4e419f238758b5062536 574 Gene3D G3DSA:2.40.50.140 114 185 8.7E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS14260 488f530c61fa73ad02bc2a0de2a1a6fb 449 Pfam PF01523 Putative modulator of DNA gyrase 27 318 5.3E-51 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS14260 488f530c61fa73ad02bc2a0de2a1a6fb 449 PANTHER PTHR30624 1 449 6.2E-126 T 22-04-2016 TMO_RS14260 488f530c61fa73ad02bc2a0de2a1a6fb 449 PANTHER PTHR30624:SF1 1 449 6.2E-126 T 22-04-2016 TMO_RS14260 488f530c61fa73ad02bc2a0de2a1a6fb 449 SUPERFAMILY SSF111283 9 448 3.27E-121 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SMART SM01086 667 756 2.3E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PANTHER PTHR11638 163 777 0.0 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Gene3D G3DSA:1.10.1780.10 2 141 8.2E-38 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 532 550 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SUPERFAMILY SSF81923 1 141 1.57E-57 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SUPERFAMILY SSF52540 182 425 4.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 748 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Gene3D G3DSA:1.10.8.60 680 763 1.4E-30 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 623 7.6E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 547 565 7.6E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 505 523 7.6E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 576 594 7.6E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Gene3D G3DSA:3.40.50.300 457 679 2.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PANTHER PTHR11638:SF111 2 138 0.0 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SUPERFAMILY SSF52540 451 755 8.27E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Gene3D G3DSA:3.40.50.300 182 364 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Pfam PF07724 AAA domain (Cdc48 subfamily) 500 660 3.0E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 669 746 2.5E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PANTHER PTHR11638:SF111 163 777 0.0 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 338 2.9E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.7E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SMART SM00382 501 637 4.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 SMART SM00382 220 364 4.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 Gene3D G3DSA:1.10.8.60 366 447 4.1E-28 T 22-04-2016 TMO_RS02990 bc1622fbcba744b9e4292d8b4c9ecac9 799 PANTHER PTHR11638 2 138 0.0 T 22-04-2016 TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 Hamap MF_01389 Urease accessory protein UreG [ureG]. 18 216 47.419 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 PIRSF PIRSF005624 15 219 3.0E-48 T 22-04-2016 TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 20 207 9.2E-104 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 PANTHER PTHR31715 18 225 1.4E-123 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 SUPERFAMILY SSF52540 14 211 6.42E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 Gene3D G3DSA:3.40.50.300 18 209 6.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08710 6fe14ecfdba00c70912a38ed901186d0 238 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 22 192 2.2E-37 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 PANTHER PTHR30055 10 214 4.6E-28 T 22-04-2016 TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 SUPERFAMILY SSF48498 96 206 3.15E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 31 71 7.7E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 1.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 1.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 SUPERFAMILY SSF46689 13 86 1.85E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07365 cb72e443ec2b55e5f5aac726387e42cc 214 Gene3D G3DSA:1.10.357.10 13 210 1.0E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Pfam PF03466 LysR substrate binding domain 111 303 2.0E-31 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 65 76 3.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 55 65 3.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PANTHER PTHR30579:SF0 22 317 4.0E-78 T 22-04-2016 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:3.40.190.10 113 203 1.7E-19 T 22-04-2016 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 SUPERFAMILY SSF53850 112 305 4.19E-29 T 22-04-2016 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 SUPERFAMILY SSF46785 26 135 8.44E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:3.40.190.10 204 261 4.7E-9 T 22-04-2016 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 30 88 3.3E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 PANTHER PTHR30579 22 317 4.0E-78 T 22-04-2016 TMO_RS16625 008f7eb33ad9c63fdae5f0a6a8c3013a 326 Gene3D G3DSA:1.10.10.10 27 108 4.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:3.40.50.980 44 226 3.3E-20 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:3.40.50.980 227 392 1.8E-33 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 PANTHER PTHR24096 22 616 5.3E-189 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Pfam PF00501 AMP-binding enzyme 49 478 1.5E-71 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:2.30.38.10 398 472 1.5E-12 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Pfam PF13193 AMP-binding enzyme C-terminal domain 488 563 2.0E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 SUPERFAMILY SSF56801 36 575 6.41E-122 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 Gene3D G3DSA:3.30.300.30 475 576 7.0E-26 T 22-04-2016 TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS06475 40100071ebf56ec42d23d28072aad1b6 644 PANTHER PTHR24096:SF170 22 616 5.3E-189 T 22-04-2016 TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 Pfam PF00005 ABC transporter 22 163 4.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 SUPERFAMILY SSF50331 239 362 5.67E-11 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 PANTHER PTHR24220 6 259 2.7E-120 T 22-04-2016 TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 SUPERFAMILY SSF52540 5 243 4.19E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 SMART SM00382 30 213 8.8E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 Gene3D G3DSA:3.40.50.300 4 240 6.1E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 PANTHER PTHR24220:SF150 6 259 2.7E-120 T 22-04-2016 TMO_RS07000 b1e1c7d1bea4099c08dcae279393ad86 365 Pfam PF08402 TOBE domain 280 362 1.4E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 148 164 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 112 127 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 66 74 2.4E-15 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 PANTHER PTHR33695 1 177 1.0E-44 T 22-04-2016 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 19 173 15.37 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 PANTHER PTHR33695:SF1 1 177 1.0E-44 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 ProSitePatterns PS00855 Signal peptidases II signature. 115 127 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 TIGRFAM TIGR00077 lspA: signal peptidase II 23 168 1.2E-32 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS14565 c940bdb77ed8430b1f63a63959734d4e 178 Pfam PF01252 Signal peptidase (SPase) II 29 168 5.5E-33 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 PANTHER PTHR10683 1 212 5.8E-76 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 Pfam PF00923 Transaldolase 3 212 2.1E-57 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 43.953 T 22-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 Gene3D G3DSA:3.20.20.70 1 215 2.1E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 SUPERFAMILY SSF51569 1 215 3.45E-75 T 22-04-2016 TMO_RS15070 56a7231c175b2ebae6f22be35ba3e593 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 6.6E-85 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 TMO_RS16860 110580af99f2144d65af1544449beb39 264 SUPERFAMILY SSF56219 1 262 3.4E-68 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS16860 110580af99f2144d65af1544449beb39 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 254 1.1E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS16860 110580af99f2144d65af1544449beb39 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 262 3.7E-53 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_RS16860 110580af99f2144d65af1544449beb39 264 PANTHER PTHR22748 1 262 1.4E-81 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_RS16860 110580af99f2144d65af1544449beb39 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TMO_RS16860 110580af99f2144d65af1544449beb39 264 PANTHER PTHR22748:SF7 1 262 1.4E-81 T 22-04-2016 TMO_RS16860 110580af99f2144d65af1544449beb39 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 261 1.9E-56 T 22-04-2016 TMO_RS16860 110580af99f2144d65af1544449beb39 264 Gene3D G3DSA:3.60.10.10 1 262 2.3E-67 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS10160 e61da8d0bb60f9e0152aed65596a0e4a 421 SUPERFAMILY SSF53756 24 409 1.26E-60 T 22-04-2016 TMO_RS10160 e61da8d0bb60f9e0152aed65596a0e4a 421 Gene3D G3DSA:3.40.50.2000 227 393 2.5E-25 T 22-04-2016 TMO_RS10160 e61da8d0bb60f9e0152aed65596a0e4a 421 PANTHER PTHR12526 125 399 2.8E-43 T 22-04-2016 TMO_RS10160 e61da8d0bb60f9e0152aed65596a0e4a 421 PANTHER PTHR12526 64 78 2.8E-43 T 22-04-2016 TMO_RS10160 e61da8d0bb60f9e0152aed65596a0e4a 421 Pfam PF00534 Glycosyl transferases group 1 232 393 2.0E-30 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 SUPERFAMILY SSF53850 58 250 4.56E-36 T 22-04-2016 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 39 288 5.1E-65 T 22-04-2016 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 260 3.0E-83 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 Gene3D G3DSA:3.40.190.10 124 235 3.6E-4 T 22-04-2016 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 7 300 8.9E-101 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 PANTHER PTHR30043:SF4 1 144 5.5E-119 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 PANTHER PTHR30043:SF4 178 331 5.5E-119 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 PANTHER PTHR30043 1 144 5.5E-119 T 22-04-2016 TMO_RS10520 84749388d93fe5b0dbf5635ea1d78f32 344 PANTHER PTHR30043 178 331 5.5E-119 T 22-04-2016 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.40.190.10 7 115 1.1E-44 T 22-04-2016 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 SUPERFAMILY SSF54782 225 314 7.59E-18 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 236 252 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 301 9.1E-102 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 217 4.1E-76 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.40.190.10 116 204 7.2E-36 T 22-04-2016 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 308 36.446 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PIRSF PIRSF001438 1 320 8.1E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 231 306 4.3E-14 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PANTHER PTHR11557 6 313 2.2E-133 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 SUPERFAMILY SSF53850 7 222 1.6E-76 T 22-04-2016 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 Gene3D G3DSA:3.30.160.40 227 313 2.6E-18 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 50 70 3.5E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 148 165 3.5E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 81 100 3.5E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 235 252 3.5E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00440 acc67d94048c012d358a02b66b301d66 329 PRINTS PR00151 Porphobilinogen deaminase signature 129 146 3.5E-43 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 354 373 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 354 372 5.6E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 393 407 5.6E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 148 164 5.6E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PRINTS PR00147 DNA photolyase signature 334 350 5.6E-24 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 SUPERFAMILY SSF52425 3 184 1.7E-51 T 22-04-2016 IPR006050 DNA photolyase, N-terminal TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PANTHER PTHR11455:SF18 7 489 1.4E-200 T 22-04-2016 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Pfam PF00875 DNA photolyase 7 172 9.1E-50 T 22-04-2016 IPR006050 DNA photolyase, N-terminal TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Pfam PF03441 FAD binding domain of DNA photolyase 285 484 4.4E-86 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:1.25.40.80 154 176 2.8E-40 T 22-04-2016 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:1.25.40.80 209 293 2.8E-40 T 22-04-2016 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:3.40.50.620 3 153 3.0E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 334 346 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 Gene3D G3DSA:1.10.579.10 294 487 2.6E-81 T 22-04-2016 TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 SUPERFAMILY SSF48173 199 488 8.63E-115 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain TMO_RS13395 9494e74e81338af9973c3e622ff854d6 489 PANTHER PTHR11455 7 489 1.4E-200 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 97 114 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 107 118 1.2E-8 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 51 65 1.2E-8 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 66 80 1.2E-8 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PRINTS PR00103 cAMP-dependent protein kinase signature 95 104 1.2E-8 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 Gene3D G3DSA:2.60.120.10 23 154 2.4E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 SUPERFAMILY SSF51206 23 156 6.55E-34 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 PANTHER PTHR11635 18 134 1.6E-21 T 22-04-2016 TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 SMART SM00100 30 147 1.0E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS10330 b5bbd7b9e6a6f7a26cc8b16dbcd794af 176 Pfam PF00027 Cyclic nucleotide-binding domain 49 134 7.5E-19 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Pfam PF00529 HlyD membrane-fusion protein of T1SS 107 268 4.0E-10 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 PANTHER PTHR30386 1 275 3.9E-66 T 22-04-2016 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 SUPERFAMILY SSF111369 45 102 7.32E-5 T 22-04-2016 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Gene3D G3DSA:2.40.50.100 138 171 3.4E-7 T 22-04-2016 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Gene3D G3DSA:2.40.50.100 24 33 3.4E-7 T 22-04-2016 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 SUPERFAMILY SSF111369 116 216 2.62E-13 T 22-04-2016 TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 217 2.7E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS14450 37b9fd0a396ee7f76bd69e25d6aaf35e 294 PANTHER PTHR30386:SF0 1 275 3.9E-66 T 22-04-2016 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 SUPERFAMILY SSF102114 89 413 2.75E-31 T 22-04-2016 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 Pfam PF13353 4Fe-4S single cluster domain 81 193 1.8E-5 T 22-04-2016 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 PANTHER PTHR11228:SF7 33 446 8.9E-28 T 22-04-2016 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 Gene3D G3DSA:3.20.20.70 83 414 1.0E-31 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 TIGRFAM TIGR03978 rSAM_paired_1: His-Xaa-Ser system radical SAM maturase HxsB 1 465 8.7E-157 T 22-04-2016 IPR024023 His-Xaa-Ser system radical SAM maturase HxsB TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 Pfam PF04055 Radical SAM superfamily 89 231 5.8E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS06390 d99f0bdb668d812bbeaf2da7fdb626e3 480 PANTHER PTHR11228 33 446 8.9E-28 T 22-04-2016 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 SMART SM00347 55 155 5.8E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 Pfam PF01047 MarR family 62 119 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 79 95 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 111 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 131 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 145 165 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 SUPERFAMILY SSF46785 30 164 1.09E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PANTHER PTHR33164 38 164 1.1E-25 T 22-04-2016 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 PANTHER PTHR33164:SF16 38 164 1.1E-25 T 22-04-2016 TMO_RS15755 533ab3de38b6cbb30e55be32806fd6aa 165 Gene3D G3DSA:1.10.10.10 34 165 3.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PANTHER PTHR30477 3 298 9.5E-135 T 22-04-2016 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 236 254 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 59 72 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 28 46 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 183 204 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 262 281 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00690 Adhesin family signature 72 89 2.8E-37 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 293 6.0E-73 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 Gene3D G3DSA:3.40.50.1980 20 175 5.1E-50 T 22-04-2016 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 SUPERFAMILY SSF53807 25 297 1.37E-89 T 22-04-2016 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 Gene3D G3DSA:3.40.50.1980 176 297 4.2E-39 T 22-04-2016 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 254 272 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 53 71 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 28 49 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 183 200 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 72 91 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 209 227 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PRINTS PR00691 Adhesin B signature 232 249 3.1E-31 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS13785 b2fb1a55038101a321429702b4a596f1 299 PANTHER PTHR30477:SF12 3 298 9.5E-135 T 22-04-2016 TMO_RS17310 3969f006c2e305abfb58ad7fe3c3aa09 318 Gene3D G3DSA:3.90.180.10 98 141 1.7E-5 T 22-04-2016 IPR011032 GroES-like TMO_RS17310 3969f006c2e305abfb58ad7fe3c3aa09 318 SUPERFAMILY SSF51735 113 253 1.02E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17310 3969f006c2e305abfb58ad7fe3c3aa09 318 Gene3D G3DSA:3.40.50.720 142 238 8.4E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17310 3969f006c2e305abfb58ad7fe3c3aa09 318 SUPERFAMILY SSF50129 3 147 5.07E-8 T 22-04-2016 IPR011032 GroES-like TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 PANTHER PTHR11019:SF58 66 310 5.2E-82 T 22-04-2016 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 Gene3D G3DSA:1.10.10.60 216 259 5.6E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF46689 259 309 4.08E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 PANTHER PTHR11019 66 310 5.2E-82 T 22-04-2016 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF52317 2 189 1.57E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 SUPERFAMILY SSF46689 207 254 4.93E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 Pfam PF01965 DJ-1/PfpI family 4 168 5.3E-22 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 Gene3D G3DSA:1.10.10.60 260 308 1.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 Pfam PF12833 Helix-turn-helix domain 229 307 8.4E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 Gene3D G3DSA:3.40.50.880 2 215 3.3E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS04005 2c815ce78231d85dda6904591e2fbfad 312 SMART SM00342 223 306 6.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 Pfam PF00448 SRP54-type protein, GTPase domain 110 310 2.3E-70 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 SUPERFAMILY SSF52540 104 311 2.43E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 SUPERFAMILY SSF47364 10 87 7.33E-19 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00382 109 249 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 Gene3D G3DSA:3.40.50.300 105 311 2.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 PANTHER PTHR11564:SF16 5 309 8.5E-117 T 22-04-2016 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 Gene3D G3DSA:1.20.120.140 3 90 8.4E-21 T 22-04-2016 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 39 310 1.9E-95 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00962 110 311 5.1E-105 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 38 311 56.961 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 SMART SM00963 15 94 3.7E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 PANTHER PTHR11564 5 309 8.5E-117 T 22-04-2016 TMO_RS00860 811a33b5ea2aaa5e5f1e12ae825c438a 314 Pfam PF02881 SRP54-type protein, helical bundle domain 27 89 1.3E-7 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS14920 88d906d3a71133c9b46a697425c92a12 99 PANTHER PTHR33755 1 98 6.2E-15 T 22-04-2016 TMO_RS14920 88d906d3a71133c9b46a697425c92a12 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 91 5.7E-15 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_RS14920 88d906d3a71133c9b46a697425c92a12 99 PIRSF PIRSF029218 1 98 1.9E-22 T 22-04-2016 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 TMO_RS14920 88d906d3a71133c9b46a697425c92a12 99 PANTHER PTHR33755:SF3 1 98 6.2E-15 T 22-04-2016 TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 Pfam PF00005 ABC transporter 17 161 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 PANTHER PTHR24220 3 215 9.3E-58 T 22-04-2016 TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 SUPERFAMILY SSF52540 2 216 1.36E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 Gene3D G3DSA:3.40.50.300 1 216 4.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 SMART SM00382 26 210 1.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04070 60d838b78689c5505646825bfdd11a39 219 PANTHER PTHR24220:SF404 3 215 9.3E-58 T 22-04-2016 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 PANTHER PTHR35446 11 196 5.5E-56 T 22-04-2016 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 53 104 4.9E-10 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 Gene3D G3DSA:1.20.1290.10 72 194 9.0E-36 T 22-04-2016 IPR029032 AhpD-like TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 Gene3D G3DSA:1.20.5.810 26 71 9.0E-19 T 22-04-2016 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 PANTHER PTHR35446:SF2 11 196 5.5E-56 T 22-04-2016 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 SUPERFAMILY SSF69118 13 194 1.83E-54 T 22-04-2016 IPR029032 AhpD-like TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 71 116 9.9E-13 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS04930 d6f5bed0192e4639b67090bd70f7a122 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 15 190 2.6E-60 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54980 402 480 1.26E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 691 110.609 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115 3 177 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115 254 282 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115 303 691 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF03144 Elongation factor Tu domain 2 324 391 1.5E-13 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.230.10 484 599 8.4E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF00009 Elongation factor Tu GTP binding domain 10 281 3.4E-72 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF03764 Elongation factor G, domain IV 479 597 6.4E-42 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 1.4E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.40.50.300 7 286 1.7E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.70.870 405 480 5.8E-39 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54980 603 689 7.67E-31 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:3.30.70.240 600 685 3.1E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF52540 6 281 4.55E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Gene3D G3DSA:2.40.30.10 306 404 1.4E-35 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115:SF66 3 177 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115:SF66 254 282 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 PANTHER PTHR23115:SF66 303 691 0.0 T 22-04-2016 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF14492 Elongation Factor G, domain II 404 478 2.4E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SMART SM00889 480 598 2.1E-60 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 Pfam PF00679 Elongation factor G C-terminus 600 686 9.9E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF50447 264 404 6.82E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SUPERFAMILY SSF54211 479 599 4.3E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS13270 dc7cd3a164bd324468fb92f0ea37807d 693 SMART SM00838 600 687 1.4E-55 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS15835 019ac3b6d92666d479e09c19219ca915 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 414 1.9E-61 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS15835 019ac3b6d92666d479e09c19219ca915 448 Pfam PF01554 MatE 245 398 6.0E-12 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS15835 019ac3b6d92666d479e09c19219ca915 448 Pfam PF01554 MatE 19 178 3.0E-18 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS15835 019ac3b6d92666d479e09c19219ca915 448 PANTHER PTHR11206:SF94 10 438 8.5E-86 T 22-04-2016 TMO_RS15835 019ac3b6d92666d479e09c19219ca915 448 PANTHER PTHR11206 10 438 8.5E-86 T 22-04-2016 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Pfam PF07690 Major Facilitator Superfamily 31 369 9.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PANTHER PTHR23501 3 209 3.0E-34 T 22-04-2016 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PANTHER PTHR23501 258 486 3.0E-34 T 22-04-2016 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 SUPERFAMILY SSF103473 271 486 1.31E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 SUPERFAMILY SSF103473 10 207 1.31E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Gene3D G3DSA:1.20.1250.20 293 484 1.0E-8 T 22-04-2016 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 Gene3D G3DSA:1.20.1250.20 28 201 8.5E-16 T 22-04-2016 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 62 81 6.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 151 173 6.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_RS04770 ff8ee0d9f0a6a50ee3f8cae722d4543b 488 PRINTS PR01035 Tetracycline resistance protein signature 351 374 6.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 Pfam PF08448 PAS fold 31 141 5.1E-14 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 SUPERFAMILY SSF55785 24 138 6.81E-11 T 22-04-2016 IPR000014 PAS domain TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 Gene3D G3DSA:1.10.3210.10 170 227 3.1E-7 T 22-04-2016 IPR006674 HD domain TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 SUPERFAMILY SSF109604 170 224 5.76E-10 T 22-04-2016 TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 Gene3D G3DSA:3.30.450.20 37 138 5.3E-11 T 22-04-2016 TMO_RS29310 1a2f65183d934b09c255caed7fcd2fc7 254 Pfam PF01966 HD domain 184 227 5.3E-5 T 22-04-2016 IPR006674 HD domain TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 PANTHER PTHR30146:SF4 5 335 3.1E-100 T 22-04-2016 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:1.10.260.40 7 56 3.5E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 SUPERFAMILY SSF53822 62 314 3.61E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 PANTHER PTHR30146 5 335 3.1E-100 T 22-04-2016 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 SMART SM00354 5 74 1.4E-28 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 SUPERFAMILY SSF47413 5 62 2.72E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 Pfam PF13377 Periplasmic binding protein-like domain 170 327 2.7E-31 T 22-04-2016 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:3.40.50.2300 174 307 3.4E-36 T 22-04-2016 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 Gene3D G3DSA:3.40.50.2300 57 173 1.6E-44 T 22-04-2016 TMO_RS02150 db23acf897fb6742edce9df103c48d6c 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 5.1E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 TMO_RS14530 e59044fdcbb6df3d0f07b79b083ef422 544 SUPERFAMILY SSF102114 261 456 6.28E-14 T 22-04-2016 TMO_RS14530 e59044fdcbb6df3d0f07b79b083ef422 544 Gene3D G3DSA:3.20.20.70 263 474 2.1E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS14530 e59044fdcbb6df3d0f07b79b083ef422 544 TIGRFAM TIGR04434 rSAM_Pput_1520: B12-binding domain/radical SAM domain protein 14 533 2.0E-299 T 22-04-2016 IPR030973 Conserved hypothetical protein CHP04434 TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52518 19 192 6.34E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.1220 205 355 9.4E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52518 390 571 1.43E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.970 19 196 3.8E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 214 347 1.7E-33 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 PANTHER PTHR18968 1 568 8.3E-143 T 22-04-2016 TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 SUPERFAMILY SSF52467 171 381 2.5E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Gene3D G3DSA:3.40.50.970 366 568 1.4E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 185 3.9E-47 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 415 563 6.1E-35 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 TMO_RS02850 5c42fe6d23f74bae78fe87c84010c32d 590 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 451 470 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 TMO_RS04450 b5640a39127e57b5cf48a1fa3bbcc313 306 SMART SM01133 40 286 1.7E-44 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS04450 b5640a39127e57b5cf48a1fa3bbcc313 306 PIRSF PIRSF038992 20 305 3.1E-61 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS04450 b5640a39127e57b5cf48a1fa3bbcc313 306 SUPERFAMILY SSF51569 20 302 3.26E-63 T 22-04-2016 TMO_RS04450 b5640a39127e57b5cf48a1fa3bbcc313 306 Gene3D G3DSA:3.20.20.70 18 304 7.3E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS04450 b5640a39127e57b5cf48a1fa3bbcc313 306 Pfam PF01791 DeoC/LacD family aldolase 41 286 7.3E-30 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 Gene3D G3DSA:3.40.50.1360 77 223 3.3E-13 T 22-04-2016 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 SMART SM01134 72 237 3.5E-49 T 22-04-2016 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 Gene3D G3DSA:1.10.10.10 4 54 2.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 PANTHER PTHR30363:SF1 1 238 2.1E-57 T 22-04-2016 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 SUPERFAMILY SSF46785 4 65 3.1E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 1.2E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 SMART SM00420 6 58 3.0E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 PANTHER PTHR30363 1 238 2.1E-57 T 22-04-2016 TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 Pfam PF00455 DeoR C terminal sensor domain 75 236 1.5E-40 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain TMO_RS05845 a119c65996fd491ec8ad356190b1c35b 257 SUPERFAMILY SSF100950 76 237 2.18E-26 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:1.10.10.10 1 84 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 SUPERFAMILY SSF46785 3 84 1.33E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 PANTHER PTHR30118:SF8 1 306 2.5E-73 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 PANTHER PTHR30118 1 306 2.5E-73 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:3.40.190.10 282 306 1.3E-14 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:3.40.190.10 98 182 1.3E-14 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 4.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Gene3D G3DSA:3.40.190.10 183 278 2.1E-28 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 SUPERFAMILY SSF53850 90 305 2.17E-33 T 22-04-2016 TMO_RS02635 fff6551cea5f20dca680e87b4d4b440c 308 Pfam PF03466 LysR substrate binding domain 134 305 5.1E-21 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 PANTHER PTHR11895 1 466 1.3E-149 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 PANTHER PTHR11895:SF76 1 466 1.3E-149 T 22-04-2016 TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 Pfam PF01425 Amidase 25 449 2.4E-100 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 ProSitePatterns PS00571 Amidases signature. 153 184 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 SUPERFAMILY SSF75304 2 458 2.75E-127 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS02905 35a047a6dca436970ca7ae224fe323ec 473 Gene3D G3DSA:3.90.1300.10 2 460 2.8E-124 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 PANTHER PTHR12725 1 242 3.9E-19 T 22-04-2016 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 Gene3D G3DSA:3.40.50.1000 114 242 3.2E-26 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 Gene3D G3DSA:3.40.50.1000 6 24 3.2E-26 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 SUPERFAMILY SSF56784 8 240 2.94E-34 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 204 7.2E-12 T 22-04-2016 TMO_RS07020 8af8f8d8e7110eb5b74a565f38cd3422 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 124 204 3.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 46 59 2.3E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 29 2.3E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 227 235 2.3E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 42 2.3E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 221 2.3E-17 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 SUPERFAMILY SSF52374 14 296 2.94E-87 T 22-04-2016 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 289 4.1E-53 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Gene3D G3DSA:3.40.50.620 15 78 5.2E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Gene3D G3DSA:3.40.50.620 213 262 5.2E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PANTHER PTHR11451:SF41 15 302 2.6E-50 T 22-04-2016 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 20 31 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 Gene3D G3DSA:3.90.800.10 79 208 3.4E-24 T 22-04-2016 TMO_RS15960 7a7718ab5a2bcfaf2dd19e7cf5ac868a 302 PANTHER PTHR11451 15 302 2.6E-50 T 22-04-2016 TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 SUPERFAMILY SSF69754 1 101 3.14E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 PANTHER PTHR33231 1 196 4.0E-35 T 22-04-2016 TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 Gene3D G3DSA:3.30.160.100 1 97 4.3E-25 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 1.4E-19 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 138 191 3.9E-14 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal TMO_RS00910 1d477e14978aaad7ccc25d34fcd9b9e7 199 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 1.3E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS13740 fc7900b015b6431b0d74edca2e39e87c 307 PANTHER PTHR30465:SF24 1 306 3.3E-111 T 22-04-2016 TMO_RS13740 fc7900b015b6431b0d74edca2e39e87c 307 PANTHER PTHR30465 1 306 3.3E-111 T 22-04-2016 TMO_RS13740 fc7900b015b6431b0d74edca2e39e87c 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 305 4.7E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13740 fc7900b015b6431b0d74edca2e39e87c 307 Gene3D G3DSA:1.10.3720.10 94 296 4.7E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13740 fc7900b015b6431b0d74edca2e39e87c 307 SUPERFAMILY SSF161098 94 291 2.75E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 PANTHER PTHR10209:SF146 22 344 7.0E-131 T 22-04-2016 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 201 301 4.8E-21 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 Gene3D G3DSA:2.60.120.330 25 342 2.7E-107 T 22-04-2016 IPR027443 Isopenicillin N synthase-like TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 PANTHER PTHR10209 22 344 7.0E-131 T 22-04-2016 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 261 287 1.8E-14 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 53 70 1.8E-14 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 PRINTS PR00682 Isopenicillin N synthase signature 175 191 1.8E-14 T 22-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 SUPERFAMILY SSF51197 25 341 8.24E-99 T 22-04-2016 TMO_RS04365 0d71dbbb69ac70b9e0f293a95984d7d4 351 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 28 154 3.2E-36 T 22-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 273 1.1E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 38 2.4E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 PANTHER PTHR30465 3 274 2.5E-97 T 22-04-2016 TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 SUPERFAMILY SSF161098 68 257 1.19E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 PANTHER PTHR30465:SF2 3 274 2.5E-97 T 22-04-2016 TMO_RS14360 300f4c569835c430bf2d5c5f128b54ea 278 Gene3D G3DSA:1.10.3720.10 67 270 1.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.9E-54 T 22-04-2016 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 70 80 5.58E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 50 58 5.58E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 6 19 5.58E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 86 97 5.58E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PRINTS PR00315 GTP-binding elongation factor signature 122 131 5.58E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:2.40.30.10 205 297 7.2E-23 T 22-04-2016 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 152 8.1E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 600 3.9E-276 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF50447 151 297 3.93E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF00679 Elongation factor G C-terminus 398 481 1.5E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PANTHER PTHR23115:SF14 4 594 1.9E-264 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 SMART SM00838 397 485 0.0028 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:2.40.50.250 484 578 2.7E-40 T 22-04-2016 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 PANTHER PTHR23115 4 594 1.9E-264 T 22-04-2016 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Pfam PF03144 Elongation factor Tu domain 2 218 288 2.1E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF52540 4 206 3.41E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.30.70.870 302 401 1.1E-31 T 22-04-2016 TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF54980 400 514 2.4E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 SUPERFAMILY SSF54980 302 387 4.65E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.30.70.240 402 483 2.6E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS17385 818ab3aa62db0469e8cdbdb2d373835d 608 Gene3D G3DSA:3.40.50.300 4 204 6.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 SUPERFAMILY SSF56672 26 259 1.25E-75 T 22-04-2016 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 PANTHER PTHR11076 27 362 1.9E-104 T 22-04-2016 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:3.30.1490.100 266 368 1.4E-23 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Pfam PF00817 impB/mucB/samB family 31 179 4.5E-45 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Pfam PF11799 impB/mucB/samB family C-terminal domain 261 370 6.4E-15 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 SUPERFAMILY SSF100879 263 361 2.35E-21 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Hamap MF_01113 DNA polymerase IV [dinB]. 25 377 32.901 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:1.10.150.20 192 264 1.7E-16 T 22-04-2016 TMO_RS12900 4367b1cc8894b3a59ee5e26d93b6b4d7 381 Gene3D G3DSA:3.30.70.270 88 188 2.7E-25 T 22-04-2016 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 SUPERFAMILY SSF81606 461 661 4.18E-8 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 SUPERFAMILY SSF158472 348 405 6.41E-5 T 22-04-2016 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 Pfam PF00672 HAMP domain 329 404 9.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 Gene3D G3DSA:3.30.450.20 58 205 9.1E-21 T 22-04-2016 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 SMART SM01049 60 153 6.4E-12 T 22-04-2016 IPR033480 Single Cache domain 2 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 473 662 3.8E-52 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 PANTHER PTHR21021 420 672 8.6E-63 T 22-04-2016 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 SMART SM00331 445 663 7.5E-47 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 SMART SM00304 347 408 8.6E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 PANTHER PTHR21021:SF19 420 672 8.6E-63 T 22-04-2016 TMO_RS29505 dfd1d23e67a344f28683a9cbfd7f09af 682 Pfam PF08269 Cache domain 32 307 1.8E-28 T 22-04-2016 IPR004010 Double Cache domain 2 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 PANTHER PTHR23501 19 503 2.2E-53 T 22-04-2016 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 Gene3D G3DSA:1.20.1250.20 24 210 9.7E-17 T 22-04-2016 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 SUPERFAMILY SSF103473 24 213 3.27E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 SUPERFAMILY SSF103473 480 498 3.27E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 SUPERFAMILY SSF103473 262 429 3.27E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 Pfam PF07690 Major Facilitator Superfamily 28 299 6.2E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 Gene3D G3DSA:1.20.1250.20 275 433 1.2E-5 T 22-04-2016 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 Gene3D G3DSA:1.20.1250.20 477 500 1.2E-5 T 22-04-2016 TMO_RS14455 5d813702ddd536c0ed04a64ecb4ff900 513 PANTHER PTHR23501:SF52 19 503 2.2E-53 T 22-04-2016 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF159672 10 224 4.45E-46 T 22-04-2016 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF01890 Cobalamin synthesis G C-terminus 217 337 2.6E-32 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF159664 210 340 5.49E-39 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.30.950.10 476 585 2.1E-13 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 PANTHER PTHR37477 7 346 1.6E-41 T 22-04-2016 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 SUPERFAMILY SSF53790 351 597 2.62E-51 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.30.420.180 210 338 4.1E-39 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 PANTHER PTHR37477:SF1 7 346 1.6E-41 T 22-04-2016 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 354 569 3.4E-35 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Pfam PF11760 Cobalamin synthesis G N-terminal 60 138 8.1E-26 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 Gene3D G3DSA:3.40.1010.10 353 475 1.8E-26 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS13980 a55dde27f720063b6a6da8eaf561819b 628 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 355 605 5.0E-82 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 TMO_RS11300 9b61bcbac4e2e76b5c2fed38a3968c72 401 SUPERFAMILY SSF103473 6 392 1.57E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS11300 9b61bcbac4e2e76b5c2fed38a3968c72 401 PANTHER PTHR23534 6 401 1.0E-61 T 22-04-2016 TMO_RS11300 9b61bcbac4e2e76b5c2fed38a3968c72 401 Pfam PF07690 Major Facilitator Superfamily 216 396 8.4E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS11300 9b61bcbac4e2e76b5c2fed38a3968c72 401 Gene3D G3DSA:1.20.1250.20 207 395 8.1E-11 T 22-04-2016 TMO_RS11300 9b61bcbac4e2e76b5c2fed38a3968c72 401 Gene3D G3DSA:1.20.1250.20 7 187 4.5E-8 T 22-04-2016 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 SMART SM00382 36 219 2.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 Gene3D G3DSA:3.40.50.300 7 242 2.4E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 PANTHER PTHR24220 13 314 2.6E-122 T 22-04-2016 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 PANTHER PTHR24220:SF150 13 314 2.6E-122 T 22-04-2016 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 Pfam PF08402 TOBE domain 285 372 1.4E-10 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 SUPERFAMILY SSF50331 245 373 9.07E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 Pfam PF00005 ABC transporter 28 169 5.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS02225 61cbb09966a7711c1a26ed25d297a460 375 SUPERFAMILY SSF52540 11 249 2.89E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 SUPERFAMILY SSF51690 118 284 2.24E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 Gene3D G3DSA:3.20.20.70 139 274 4.4E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 115 4.5E-23 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 SUPERFAMILY SSF54675 8 117 6.9E-31 T 22-04-2016 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 Gene3D G3DSA:3.90.1170.20 8 138 4.2E-42 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 PANTHER PTHR32179 8 284 2.6E-110 T 22-04-2016 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 18 284 8.1E-95 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 PIRSF PIRSF006250 11 285 2.4E-90 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD TMO_RS09565 87d8cbab5148d18ce3367a86f8826b8c 285 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 118 283 1.3E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 PANTHER PTHR14226:SF24 3 186 2.5E-85 T 22-04-2016 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 PANTHER PTHR14226:SF24 259 350 2.5E-85 T 22-04-2016 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 PANTHER PTHR14226 259 350 2.5E-85 T 22-04-2016 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 Pfam PF01734 Patatin-like phospholipase 5 161 6.3E-22 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 SUPERFAMILY SSF52151 2 176 1.73E-49 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 SUPERFAMILY SSF52151 264 334 1.73E-49 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 PANTHER PTHR14226 3 186 2.5E-85 T 22-04-2016 TMO_RS09485 62068482eb62c980c3b2311b3bc408f6 365 Gene3D G3DSA:3.40.1090.10 9 161 4.7E-11 T 22-04-2016 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PANTHER PTHR12534 6 265 8.1E-111 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Gene3D G3DSA:1.10.287.610 102 154 7.9E-20 T 22-04-2016 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 SUPERFAMILY SSF52313 8 231 9.81E-89 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 227 39.837 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 160 184 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Pfam PF00318 Ribosomal protein S2 11 226 1.5E-90 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Gene3D G3DSA:3.40.50.10490 160 231 8.7E-61 T 22-04-2016 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 Gene3D G3DSA:3.40.50.10490 25 101 8.7E-61 T 22-04-2016 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 8 26 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 177 188 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 198 212 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 160 177 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 39 48 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 PRINTS PR00395 Ribosomal protein S2 signature 89 106 4.7E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08955 46b01e00099e4d3d73fe8a5e1f5d5c50 268 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 6 228 1.5E-94 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.1E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 PANTHER PTHR10359:SF18 4 209 6.5E-85 T 22-04-2016 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 SMART SM00478 38 185 5.9E-50 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 PIRSF PIRSF001435 1 210 1.1E-46 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Gene3D G3DSA:1.10.1670.10 123 208 5.3E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.6E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.373 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.4E-78 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 SUPERFAMILY SSF48150 2 208 7.85E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 PANTHER PTHR10359 4 209 6.5E-85 T 22-04-2016 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 SMART SM00525 186 206 5.2E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.9E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS17365 4fbb5b8301eb7dc9ec7972d3bbfbda4a 225 Gene3D G3DSA:1.10.340.30 26 122 4.8E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1430 39 140 3.9E-33 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82714 184 273 4.84E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1041 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.2090.10 721 804 2.4E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:1.10.3850.10 813 1025 1.1E-56 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:1.10.3850.10 283 500 1.3E-63 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 564 670 6.02E-21 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.70.1430 566 670 6.0E-20 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Pfam PF00873 AcrB/AcrD/AcrF family 2 1025 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82866 805 1027 1.7E-48 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 39 133 1.7E-26 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 4.1E-98 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82866 298 500 4.58E-52 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PANTHER PTHR32063 1 1042 0.0 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 Gene3D G3DSA:3.30.2090.10 183 277 2.5E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82714 721 805 5.89E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 137 183 2.35E-26 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 SUPERFAMILY SSF82693 276 332 2.35E-26 T 22-04-2016 TMO_RS13440 3509c4b93eb65233971fe3ed6f885383 1050 PANTHER PTHR32063:SF27 1 1042 0.0 T 22-04-2016 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 PANTHER PTHR23105 20 229 1.1E-82 T 22-04-2016 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 228 1.1E-100 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 PANTHER PTHR23105:SF51 20 229 1.1E-82 T 22-04-2016 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 Gene3D G3DSA:3.40.50.790 69 159 6.4E-40 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.2E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 Gene3D G3DSA:3.30.190.20 161 226 2.4E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 Gene3D G3DSA:3.30.190.20 16 68 2.4E-47 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 SUPERFAMILY SSF56808 6 225 1.12E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 229 43.42 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 PIRSF PIRSF002155 1 227 2.7E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 TMO_RS13310 3f386c2557418c4260aaf6115c6ca131 239 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 PANTHER PTHR11993:SF10 1 389 2.5E-246 T 22-04-2016 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 3 394 50.313 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 124 394 5.3E-125 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 10 394 1.4E-185 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 SUPERFAMILY SSF56762 20 394 1.19E-144 T 22-04-2016 IPR029014 NiFe hydrogenase-like TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 PANTHER PTHR11993 1 389 2.5E-246 T 22-04-2016 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 47 58 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 TMO_RS09930 1f6c7637ea960a515bfc2ca19f625187 394 Gene3D G3DSA:1.10.645.10 11 380 1.6E-66 T 22-04-2016 IPR029014 NiFe hydrogenase-like TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 PANTHER PTHR32089:SF40 475 754 1.3E-93 T 22-04-2016 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 SMART SM00283 497 751 3.5E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 559 750 3.6E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 Pfam PF00672 HAMP domain 390 454 5.5E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 Gene3D G3DSA:1.10.287.950 518 721 1.8E-48 T 22-04-2016 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 SUPERFAMILY SSF58104 503 750 2.09E-60 T 22-04-2016 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 SUPERFAMILY SSF58104 428 462 2.09E-60 T 22-04-2016 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 SMART SM00304 408 460 1.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03145 0acf0cf8f2e49819056bb3b68a1476e6 757 PANTHER PTHR32089 475 754 1.3E-93 T 22-04-2016 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 Pfam PF00775 Dioxygenase 44 226 5.5E-58 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 PANTHER PTHR33711 8 234 7.8E-92 T 22-04-2016 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 13 234 2.9E-106 T 22-04-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 SUPERFAMILY SSF49482 7 233 3.92E-71 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 PANTHER PTHR33711:SF1 8 234 7.8E-92 T 22-04-2016 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 77 105 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 7 38 5.3E-14 T 22-04-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 TMO_RS12235 5f1ce877f9aaea197bbb29d21739b8d3 234 Gene3D G3DSA:2.60.130.10 8 234 6.7E-72 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 Gene3D G3DSA:3.40.50.1000 32 227 2.8E-27 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 PANTHER PTHR12725 31 215 1.8E-28 T 22-04-2016 TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 32 210 4.6E-58 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 Pfam PF13419 Haloacid dehalogenase-like hydrolase 35 211 4.8E-9 T 22-04-2016 IPR023214 HAD-like domain TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 34 211 3.8E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS13650 f4e98e3d58fa912523754d1b27ec58df 255 SUPERFAMILY SSF56784 32 234 4.29E-33 T 22-04-2016 IPR023214 HAD-like domain TMO_RS02805 ed143c7386db5a98d3127f845f02935b 153 PIRSF PIRSF006173 6 153 3.5E-62 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 TMO_RS02805 ed143c7386db5a98d3127f845f02935b 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 8 153 39.183 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 TMO_RS02805 ed143c7386db5a98d3127f845f02935b 153 PANTHER PTHR37421 6 152 5.2E-55 T 22-04-2016 TMO_RS02805 ed143c7386db5a98d3127f845f02935b 153 Pfam PF03692 Putative zinc- or iron-chelating domain 30 98 3.3E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein TMO_RS02805 ed143c7386db5a98d3127f845f02935b 153 PANTHER PTHR37421:SF1 6 152 5.2E-55 T 22-04-2016 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF52540 546 855 2.77E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SMART SM01086 766 855 1.1E-41 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SMART SM00382 597 767 2.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SMART SM00382 200 345 6.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 6.3E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 146 3.3E-8 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 8.8E-27 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF81923 4 157 4.91E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PANTHER PTHR11638:SF18 1 861 0.0 T 22-04-2016 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PANTHER PTHR11638 1 861 0.0 T 22-04-2016 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 336 6.8E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:1.10.8.60 778 860 2.2E-33 T 22-04-2016 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 SUPERFAMILY SSF52540 161 543 1.21E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 8.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 8.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 8.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 8.0E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 6.4E-53 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:1.10.1780.10 1 150 1.8E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:3.40.50.300 162 344 2.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:3.40.50.300 550 777 7.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01950 2082dcca0198d40083f3d91fe08368c4 865 Gene3D G3DSA:1.10.8.60 346 430 2.7E-37 T 22-04-2016 TMO_RS08630 a933a88aefa5cfc8ef32bb22b828180a 340 SUPERFAMILY SSF52518 18 339 5.4E-104 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS08630 a933a88aefa5cfc8ef32bb22b828180a 340 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 337 1.6E-150 T 22-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 TMO_RS08630 a933a88aefa5cfc8ef32bb22b828180a 340 Pfam PF00676 Dehydrogenase E1 component 32 329 1.2E-101 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 TMO_RS08630 a933a88aefa5cfc8ef32bb22b828180a 340 Gene3D G3DSA:3.40.50.970 13 339 1.8E-135 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS08630 a933a88aefa5cfc8ef32bb22b828180a 340 PANTHER PTHR11516 24 336 3.4E-167 T 22-04-2016 TMO_RS15790 4ff3e0045d4518fd26c96a2967ddbf0e 222 SMART SM00464 11 208 2.0E-11 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 TMO_RS15790 4ff3e0045d4518fd26c96a2967ddbf0e 222 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 207 7.6E-27 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 TMO_RS15790 4ff3e0045d4518fd26c96a2967ddbf0e 222 SUPERFAMILY SSF88697 11 207 1.39E-47 T 22-04-2016 IPR015947 PUA-like domain TMO_RS15790 4ff3e0045d4518fd26c96a2967ddbf0e 222 PANTHER PTHR10046 8 207 3.2E-27 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 Gene3D G3DSA:1.10.10.10 17 87 2.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 SUPERFAMILY SSF46785 15 107 1.11E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 PANTHER PTHR11751 18 106 8.5E-30 T 22-04-2016 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 PANTHER PTHR11751:SF364 18 106 8.5E-30 T 22-04-2016 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 SMART SM00345 23 82 1.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 SUPERFAMILY SSF64288 70 243 2.36E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 18 244 2.6E-93 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 1.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 Gene3D G3DSA:3.40.1410.10 100 236 1.1E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 SMART SM00866 103 240 5.0E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 82 5.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS14885 f1657f01c42949534442c16ac8fc9e87 245 Pfam PF07702 UTRA domain 104 240 6.7E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 70 1.5E-29 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-7 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 PRINTS PR01249 Ribosomal protein L31 signature 50 68 1.4E-7 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 60 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 Pfam PF01197 Ribosomal protein L31 1 69 4.5E-25 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 PANTHER PTHR33280:SF2 1 69 3.2E-23 T 22-04-2016 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 SUPERFAMILY SSF143800 1 71 1.1E-20 T 22-04-2016 TMO_RS04415 d42a9723163421597e00b1c9304758ac 73 PANTHER PTHR33280 1 69 3.2E-23 T 22-04-2016 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 PANTHER PTHR21600 14 317 4.3E-75 T 22-04-2016 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 Pfam PF01479 S4 domain 15 60 6.3E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 79 236 1.0E-44 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 Gene3D G3DSA:3.10.290.10 14 75 3.6E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 PANTHER PTHR21600:SF2 14 317 4.3E-75 T 22-04-2016 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 SMART SM00363 14 71 1.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 112 126 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 SUPERFAMILY SSF55120 74 237 8.06E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 Pfam PF00849 RNA pseudouridylate synthase 75 205 8.9E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS29510 657cfb52f1d8d82dc62edda5bf9846e1 588 SUPERFAMILY SSF55174 14 78 2.35E-13 T 22-04-2016 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 PANTHER PTHR11649:SF3 15 305 1.0E-111 T 22-04-2016 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 SUPERFAMILY SSF52540 22 216 5.14E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 Gene3D G3DSA:3.40.50.300 11 183 2.3E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 Hamap MF_00367 GTPase Era [era]. 16 307 31.251 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 178 5.1E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 Gene3D G3DSA:3.30.300.20 200 303 5.5E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 Pfam PF01926 50S ribosome-binding GTPase 21 136 2.0E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 Pfam PF07650 KH domain 219 295 4.8E-14 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 SUPERFAMILY SSF54814 192 308 3.79E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 PANTHER PTHR11649 15 305 1.0E-111 T 22-04-2016 TMO_RS08030 9f1bb9c8e4c3d60bc6e5fdae6aa72983 311 TIGRFAM TIGR00436 era: GTP-binding protein Era 19 290 1.5E-67 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 SUPERFAMILY SSF56024 514 695 2.22E-67 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Hamap MF_00347 Polyphosphate kinase [ppk]. 23 699 31.43 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Pfam PF13089 Polyphosphate kinase N-terminal domain 26 130 3.1E-36 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Gene3D G3DSA:3.30.1840.10 127 311 4.3E-58 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Gene3D G3DSA:3.30.870.10 514 696 1.1E-69 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 SUPERFAMILY SSF140356 23 126 2.62E-37 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 PIRSF PIRSF015589 7 711 9.9E-266 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Pfam PF13090 Polyphosphate kinase C-terminal domain 344 695 7.0E-153 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Pfam PF02503 Polyphosphate kinase middle domain 140 334 2.1E-54 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 SUPERFAMILY SSF56024 334 511 1.53E-56 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 PANTHER PTHR30218 6 683 0.0 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 25 697 1.6E-287 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 SUPERFAMILY SSF143724 128 326 4.9E-59 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 PANTHER PTHR30218:SF0 6 683 0.0 T 22-04-2016 TMO_RS16710 04dcca34651bd5960955bb60a0b4ba38 719 Gene3D G3DSA:3.30.870.10 333 513 4.3E-77 T 22-04-2016 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 Pfam PF02308 MgtC family 10 138 1.4E-26 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 13 32 8.3E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 32 50 8.3E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 93 117 8.3E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 PRINTS PR01837 MgtC/SapB protein signature 66 88 8.3E-31 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS07255 04d3151dc8e9622b6f88dffd67cc02a9 149 PANTHER PTHR33778 1 141 3.1E-30 T 22-04-2016 TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Gene3D G3DSA:2.40.128.130 826 1103 1.4E-61 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 636 1103 8.2E-47 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 SMART SM00869 831 1093 6.9E-46 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Gene3D G3DSA:2.160.20.20 419 704 8.5E-10 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 PANTHER PTHR35037:SF3 554 1063 2.7E-25 T 22-04-2016 TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 PANTHER PTHR35037 554 1063 2.7E-25 T 22-04-2016 TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 SUPERFAMILY SSF51126 424 715 1.57E-28 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 569 598 5.5E-11 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 SUPERFAMILY SSF103515 786 1103 1.02E-63 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Gene3D G3DSA:3.60.10.10 313 387 4.8E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Gene3D G3DSA:3.60.10.10 23 219 4.8E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 SUPERFAMILY SSF56219 309 386 2.4E-17 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 SUPERFAMILY SSF56219 22 171 2.4E-17 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Pfam PF12951 Passenger-associated-transport-repeat 570 598 2.6E-9 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat TMO_RS01985 7eb7191ff26e5d0f9bc34f072d20b521 1103 Pfam PF03797 Autotransporter beta-domain 832 1088 1.2E-46 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS15770 62e9c294ce2d9bd4552ccb2412538c98 164 PANTHER PTHR37315 9 164 1.2E-28 T 22-04-2016 TMO_RS15770 62e9c294ce2d9bd4552ccb2412538c98 164 Pfam PF11578 Protein of unknown function (DUF3237) 10 163 1.9E-38 T 22-04-2016 IPR020915 Uncharacterised protein family UPF0311 TMO_RS15770 62e9c294ce2d9bd4552ccb2412538c98 164 Gene3D G3DSA:2.40.160.20 6 163 1.8E-46 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 5.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 471 5.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 SMART SM00387 366 474 9.8E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 SUPERFAMILY SSF55874 331 474 2.88E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PANTHER PTHR24423 12 18 5.6E-44 T 22-04-2016 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PANTHER PTHR24423 199 476 5.6E-44 T 22-04-2016 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 471 3.0E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PANTHER PTHR24423:SF496 12 18 5.6E-44 T 22-04-2016 TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 Gene3D G3DSA:3.30.565.10 324 475 1.9E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02410 6d6d31eb53a1101442c1830481fa5570 481 PANTHER PTHR24423:SF496 199 476 5.6E-44 T 22-04-2016 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 PANTHER PTHR23501:SF11 29 417 7.1E-137 T 22-04-2016 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 Pfam PF07690 Major Facilitator Superfamily 43 288 3.5E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 Gene3D G3DSA:1.20.1250.20 38 217 7.7E-29 T 22-04-2016 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 Gene3D G3DSA:1.20.1250.20 240 417 5.0E-14 T 22-04-2016 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 PANTHER PTHR23501 29 417 7.1E-137 T 22-04-2016 TMO_RS03700 2b76e9659171301da4b77e6839c11c13 421 SUPERFAMILY SSF103473 22 417 4.05E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 529 547 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 281 299 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 465 562 6.8E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 47 65 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 621 639 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 454 472 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 403 497 1.57E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 39 50 1.2E-9 T 22-04-2016 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 117 125 1.2E-9 T 22-04-2016 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 60 68 1.2E-9 T 22-04-2016 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR00313 NodO calcium binding signature 210 219 1.2E-9 T 22-04-2016 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 9 83 1.57E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 114 173 1.57E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF08548 Peptidase M10 serralysin C terminal 817 963 2.9E-6 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 445 463 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 65 83 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 573 720 3.66E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 663 814 3.79E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 290 392 1.19E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 752 770 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 56 74 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 761 779 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 603 621 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 182 310 9.16E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 612 630 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 SUPERFAMILY SSF51120 767 924 3.27E-23 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 5 174 3.3E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 664 807 9.1E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 406 499 3.2E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 819 913 1.8E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 504 663 9.1E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Gene3D G3DSA:2.150.10.10 248 400 1.1E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 272 290 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 440 456 2.6 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 201 217 0.38 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 505 522 0.97 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 746 763 0.012 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 822 838 7.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 5 21 0.11 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 524 540 0.45 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 248 265 0.6 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 371 384 1.4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 598 614 0.11 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 840 856 0.026 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 116 133 0.061 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 685 698 63.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 457 474 4.9 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 60 76 0.29 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 764 780 0.64 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 23 40 0.069 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 728 745 0.045 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 285 301 6.6 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 368 56.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 58 0.0066 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 579 595 4.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 625 640 0.15 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 421 438 0.34 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 283 0.09 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 857 874 0.23 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 616 637 2.0E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS06625 8ce4f122b147e80323a66478f98392d0 978 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 849 870 2.0E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 Pfam PF13458 Periplasmic binding protein 28 389 2.3E-64 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 Gene3D G3DSA:3.40.50.2300 159 306 1.7E-19 T 22-04-2016 TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 SUPERFAMILY SSF53822 28 392 7.85E-53 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 PANTHER PTHR30483 1 382 1.6E-133 T 22-04-2016 TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 Gene3D G3DSA:3.40.50.2300 307 374 3.3E-20 T 22-04-2016 TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 Gene3D G3DSA:3.40.50.2300 22 158 3.3E-20 T 22-04-2016 TMO_RS15455 641727015f7bf9508cee06ba3a7584e2 410 PANTHER PTHR30483:SF5 1 382 1.6E-133 T 22-04-2016 TMO_RS15340 f4b6821ef1430c561493a01a7fbf8425 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 249 6.3E-42 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS15340 f4b6821ef1430c561493a01a7fbf8425 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 115 135 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS15340 f4b6821ef1430c561493a01a7fbf8425 267 Gene3D G3DSA:3.90.226.10 12 264 1.5E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15340 f4b6821ef1430c561493a01a7fbf8425 267 SUPERFAMILY SSF52096 10 262 6.93E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15340 f4b6821ef1430c561493a01a7fbf8425 267 PANTHER PTHR11941 1 237 3.5E-53 T 22-04-2016 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 SUPERFAMILY SSF63380 222 313 6.45E-15 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 Gene3D G3DSA:2.40.30.10 223 311 5.9E-13 T 22-04-2016 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 PANTHER PTHR11972:SF55 63 337 4.0E-14 T 22-04-2016 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 Pfam PF00175 Oxidoreductase NAD-binding domain 327 424 7.9E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 PANTHER PTHR11972 63 337 4.0E-14 T 22-04-2016 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 Pfam PF08022 FAD-binding domain 229 296 4.0E-9 T 22-04-2016 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 Gene3D G3DSA:3.40.50.80 320 443 1.8E-20 T 22-04-2016 TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 Pfam PF01794 Ferric reductase like transmembrane component 61 177 4.9E-12 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain TMO_RS16960 e10394a1659aa9f4eb407fd54b9c0521 446 SUPERFAMILY SSF52343 302 441 9.69E-24 T 22-04-2016 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 SMART SM00382 189 334 8.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Pfam PF00158 Sigma-54 interaction domain 170 336 1.4E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:3.40.50.300 166 342 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 PANTHER PTHR32071 1 510 4.1E-151 T 22-04-2016 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 PANTHER PTHR32071:SF22 1 510 4.1E-151 T 22-04-2016 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:1.10.10.60 449 502 2.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF46689 383 501 5.38E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 256 271 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 502 2.4E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 465 482 2.4E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:1.10.8.60 343 416 2.5E-23 T 22-04-2016 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 383 392 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Pfam PF02954 Bacterial regulatory protein, Fis family 459 497 1.7E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Pfam PF00989 PAS fold 34 127 2.3E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF52540 169 412 1.18E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 Gene3D G3DSA:3.30.450.20 32 127 2.1E-9 T 22-04-2016 TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 SUPERFAMILY SSF55785 33 126 7.42E-12 T 22-04-2016 IPR000014 PAS domain TMO_RS10135 19b6d2c00309cc319808ec920c36192b 510 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 193 206 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 Gene3D G3DSA:3.40.190.10 152 295 1.1E-43 T 22-04-2016 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 Gene3D G3DSA:3.90.76.10 67 151 6.8E-32 T 22-04-2016 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 433 2.3E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 PANTHER PTHR30290 1 531 6.4E-127 T 22-04-2016 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 SUPERFAMILY SSF53850 31 520 1.81E-133 T 22-04-2016 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 PIRSF PIRSF002741 3 532 1.5E-137 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS14350 a0c3b788f1f959608419b357f03cb87f 532 Gene3D G3DSA:3.10.105.10 296 497 2.2E-48 T 22-04-2016 TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 507 6.9E-148 T 22-04-2016 IPR004482 Mg chelatase-related protein TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 SUPERFAMILY SSF54211 9 169 6.83E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 PANTHER PTHR32039 2 507 4.4E-194 T 22-04-2016 TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 PANTHER PTHR32039:SF7 2 507 4.4E-194 T 22-04-2016 IPR004482 Mg chelatase-related protein TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 507 1.9E-25 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 SUPERFAMILY SSF52540 189 417 1.21E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 SUPERFAMILY SSF52540 450 509 1.21E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 SMART SM00382 209 391 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 Gene3D G3DSA:3.30.230.10 6 147 3.1E-21 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 Gene3D G3DSA:3.40.50.300 189 385 2.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 140 1.4E-35 T 22-04-2016 TMO_RS17355 547b1e08c49fbb7d377fe868d4d0533c 537 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 389 6.1E-87 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain TMO_RS10175 24600e8a51e4c63a50e894135d8cbbf4 402 Gene3D G3DSA:3.40.50.2000 199 376 1.5E-19 T 22-04-2016 TMO_RS10175 24600e8a51e4c63a50e894135d8cbbf4 402 SUPERFAMILY SSF53756 13 383 1.73E-23 T 22-04-2016 TMO_RS10175 24600e8a51e4c63a50e894135d8cbbf4 402 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 297 377 3.1E-9 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 153 661 1.8E-88 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:3.40.50.1000 511 651 8.9E-56 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:3.40.50.1000 355 398 8.9E-56 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 108 692 2.5E-188 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF56784 441 690 1.14E-58 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF56784 382 402 1.14E-58 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81665 150 185 2.35E-14 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81665 283 378 2.35E-14 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81665 632 658 2.35E-14 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PANTHER PTHR24093:SF50 34 696 5.8E-235 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 93 112 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 305 319 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 171 189 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 151 170 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 367 382 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 656 670 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00943 Copper-transporting ATPase signature 560 577 1.4E-13 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 618 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 602 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 540 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 232 246 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 384 398 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 519 5.3E-29 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Pfam PF00122 E1-E2 ATPase 152 375 2.4E-64 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Pfam PF00702 haloacid dehalogenase-like hydrolase 380 597 1.8E-44 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:3.40.1110.10 399 510 1.3E-22 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 PANTHER PTHR24093 34 696 5.8E-235 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 89 693 9.1E-179 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 SUPERFAMILY SSF81653 186 282 1.31E-24 T 22-04-2016 TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 386 392 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site TMO_RS07320 401e97c82698ca2d8166a98b0d7e6c95 697 Gene3D G3DSA:2.70.150.10 106 282 3.4E-26 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 PANTHER PTHR23502:SF19 13 360 3.7E-67 T 22-04-2016 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 Pfam PF07690 Major Facilitator Superfamily 28 357 1.0E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 SUPERFAMILY SSF103473 11 387 7.59E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 Gene3D G3DSA:1.20.1250.20 213 389 2.7E-11 T 22-04-2016 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 Gene3D G3DSA:1.20.1250.20 14 193 7.0E-30 T 22-04-2016 TMO_RS08470 c9c9da0758401e83e8d620029ec0fb2d 395 PANTHER PTHR23502 13 360 3.7E-67 T 22-04-2016 TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 PANTHER PTHR30580 12 734 1.1E-206 T 22-04-2016 TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 733 22.957 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 SMART SM00490 498 595 5.8E-6 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 Pfam PF00270 DEAD/DEAH box helicase 222 364 1.2E-11 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 Gene3D G3DSA:3.40.50.300 200 373 2.2E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 Gene3D G3DSA:3.40.50.300 466 638 8.7E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 SUPERFAMILY SSF52540 199 372 1.28E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 SMART SM00487 194 392 4.3E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 SUPERFAMILY SSF52540 223 270 1.49E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 SUPERFAMILY SSF52540 501 616 1.49E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 Pfam PF00271 Helicase conserved C-terminal domain 512 594 9.7E-6 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS15065 c1ffa2086c7fa22c9c909bfac9b801c0 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 1.5E-184 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 SUPERFAMILY SSF52172 1 128 1.99E-35 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 PANTHER PTHR26402:SF578 1 224 2.5E-74 T 22-04-2016 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 Gene3D G3DSA:3.40.50.2300 1 123 2.2E-33 T 22-04-2016 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 Pfam PF00072 Response regulator receiver domain 3 117 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 3.2E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 SMART SM00448 1 116 3.3E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 PANTHER PTHR26402 1 224 2.5E-74 T 22-04-2016 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 SMART SM00862 149 224 3.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 Gene3D G3DSA:1.10.10.10 131 225 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13530 dbdd70823ccc44cf1c933c29ccae3967 234 SUPERFAMILY SSF46894 131 224 1.16E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS14995 bda52c9fe9d9bb81183c64ddb07b1681 468 Gene3D G3DSA:2.70.70.10 345 463 1.0E-27 T 22-04-2016 TMO_RS14995 bda52c9fe9d9bb81183c64ddb07b1681 468 PANTHER PTHR21666 332 462 2.1E-20 T 22-04-2016 TMO_RS14995 bda52c9fe9d9bb81183c64ddb07b1681 468 Pfam PF01551 Peptidase family M23 368 458 1.0E-19 T 22-04-2016 IPR016047 Peptidase M23 TMO_RS14995 bda52c9fe9d9bb81183c64ddb07b1681 468 SUPERFAMILY SSF51261 340 462 6.28E-28 T 22-04-2016 IPR011055 Duplicated hybrid motif TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 SUPERFAMILY SSF46785 1 60 2.21E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 SUPERFAMILY SSF54909 62 149 1.74E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 PANTHER PTHR30154:SF28 1 144 7.3E-59 T 22-04-2016 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.3E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 PANTHER PTHR30154 1 144 7.3E-59 T 22-04-2016 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 7.2E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 7.2E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 7.2E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 Gene3D G3DSA:3.30.70.920 54 138 7.6E-29 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 SMART SM00344 1 110 2.3E-46 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.7E-18 T 22-04-2016 TMO_RS14895 c6d877beb416b84b543fa83091203e7e 152 Gene3D G3DSA:1.10.10.10 2 53 9.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 336 6.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 SMART SM00387 382 493 2.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 SUPERFAMILY SSF55874 325 493 4.85E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 SMART SM00388 267 336 3.8E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 Gene3D G3DSA:3.30.565.10 323 493 5.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 493 1.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 1.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 1.6E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 SUPERFAMILY SSF47384 252 337 2.16E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 492 6.0E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 PANTHER PTHR24423 246 493 3.6E-69 T 22-04-2016 TMO_RS29110 2fb48f37c151b875ff369d06248d9248 493 Gene3D G3DSA:1.10.287.130 261 322 6.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00165 65f05ec2ae2536b81a2a82c2161705e5 372 SUPERFAMILY SSF56601 6 358 3.22E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS00165 65f05ec2ae2536b81a2a82c2161705e5 372 PANTHER PTHR22935:SF77 1 370 3.6E-92 T 22-04-2016 TMO_RS00165 65f05ec2ae2536b81a2a82c2161705e5 372 PANTHER PTHR22935 1 370 3.6E-92 T 22-04-2016 TMO_RS00165 65f05ec2ae2536b81a2a82c2161705e5 372 Gene3D G3DSA:3.40.710.10 6 363 5.1E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS00165 65f05ec2ae2536b81a2a82c2161705e5 372 Pfam PF00144 Beta-lactamase 5 353 9.4E-71 T 22-04-2016 IPR001466 Beta-lactamase-related TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 139 235 1.5E-31 T 22-04-2016 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 PANTHER PTHR11964 6 383 9.8E-205 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 387 8.7E-155 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 114 234 1.53E-41 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 PIRSF PIRSF000497 1 389 1.6E-160 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 5 111 1.92E-40 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 4.0E-36 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 377 9.7E-65 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 13 138 2.0E-41 T 22-04-2016 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Gene3D G3DSA:3.30.300.10 246 387 1.5E-65 T 22-04-2016 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 388 49.748 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 104 4.8E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS17815 06cc9c2cbfaf10c08bea26a1805ab1e1 389 SUPERFAMILY SSF55973 235 387 7.06E-65 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.50.100 1150 1206 5.8E-9 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.50.100 977 1015 2.6E-5 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376:SF32 1173 1258 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376:SF32 5 940 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376:SF32 962 1152 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376:SF32 1313 1373 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04998 RNA polymerase Rpb1, domain 5 763 1322 1.8E-72 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376 1173 1258 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376 5 940 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376 962 1152 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 PANTHER PTHR19376 1313 1373 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 SUPERFAMILY SSF64484 1128 1373 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 SUPERFAMILY SSF64484 17 941 0.0 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 759 5.2E-17 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.40.20 351 378 2.1E-36 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Gene3D G3DSA:2.40.40.20 419 491 2.1E-36 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04983 RNA polymerase Rpb1, domain 3 491 644 4.9E-25 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 14 638 32.107 T 22-04-2016 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 394 487 2.1E-26 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF00623 RNA polymerase Rpb1, domain 2 346 396 4.6E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1386 10.433 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 344 2.5E-90 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 SMART SM00663 237 516 1.7E-183 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13285 a10f844b32e9af775e62dc0513edf7be 1411 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1375 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS05160 1fb2320007802d8d492b25be33ab427a 380 PANTHER PTHR22935 74 366 1.3E-64 T 22-04-2016 TMO_RS05160 1fb2320007802d8d492b25be33ab427a 380 PANTHER PTHR22935:SF2 74 366 1.3E-64 T 22-04-2016 TMO_RS05160 1fb2320007802d8d492b25be33ab427a 380 Gene3D G3DSA:3.40.710.10 79 359 5.7E-46 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS05160 1fb2320007802d8d492b25be33ab427a 380 SUPERFAMILY SSF56601 21 375 7.24E-75 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS05160 1fb2320007802d8d492b25be33ab427a 380 Pfam PF00144 Beta-lactamase 82 362 1.1E-41 T 22-04-2016 IPR001466 Beta-lactamase-related TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 PANTHER PTHR11061 4 498 4.1E-60 T 22-04-2016 TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 SUPERFAMILY SSF53335 285 488 2.22E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 SUPERFAMILY SSF53335 92 246 2.22E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 SUPERFAMILY SSF50249 28 84 2.06E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 422 486 5.2E-5 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 Gene3D G3DSA:2.40.50.140 28 103 4.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 PANTHER PTHR11061:SF30 4 498 4.1E-60 T 22-04-2016 TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 Gene3D G3DSA:3.40.50.150 310 491 2.2E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29080 c8f6d70e046ae11e6696ca64ab99f158 535 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 425 455 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site TMO_RS23985 e40c8f69a7ca13bbf6746582777e79dc 303 SUPERFAMILY SSF51126 217 298 2.4E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS23985 e40c8f69a7ca13bbf6746582777e79dc 303 Pfam PF12708 Pectate lyase superfamily protein 220 288 2.1E-11 T 22-04-2016 IPR024535 Pectate lyase superfamily protein TMO_RS23985 e40c8f69a7ca13bbf6746582777e79dc 303 Gene3D G3DSA:2.160.20.10 215 294 3.8E-11 T 22-04-2016 IPR012334 Pectin lyase fold TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 298 1.1E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 PANTHER PTHR10996 1 322 3.3E-112 T 22-04-2016 TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 SUPERFAMILY SSF51735 109 299 1.11E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 209 231 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 238 254 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 Gene3D G3DSA:3.40.50.720 8 122 1.3E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 Gene3D G3DSA:3.40.50.720 123 301 5.8E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 SUPERFAMILY SSF52283 8 146 3.02E-27 T 22-04-2016 TMO_RS11740 3a111b634ba77eb02321ee16a60c7b09 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 328 3.4E-24 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 TMO_RS15870 e37a6f9bbbcd4f000f963fe55f1c60f9 230 Pfam PF04366 Las17-binding protein actin regulator 109 228 2.4E-29 T 22-04-2016 IPR007461 Ysc84 actin-binding domain TMO_RS15870 e37a6f9bbbcd4f000f963fe55f1c60f9 230 PANTHER PTHR15629 74 216 2.6E-28 T 22-04-2016 TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 SMART SM00849 33 229 8.6E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 SUPERFAMILY SSF56281 23 435 6.55E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 Gene3D G3DSA:3.60.15.10 21 269 3.8E-68 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 PANTHER PTHR11203:SF22 12 561 2.3E-161 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 377 405 - T 22-04-2016 IPR001587 Ribonuclease J, conserved site TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 Pfam PF00753 Metallo-beta-lactamase superfamily 43 189 1.1E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 374 416 1.3E-9 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain TMO_RS09865 f95f110065ed98f0fc680ec5fa71c8b7 566 PANTHER PTHR11203 12 561 2.3E-161 T 22-04-2016 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 SMART SM01387 8 88 8.0E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 PANTHER PTHR23321 1 88 5.5E-44 T 22-04-2016 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 Pfam PF00312 Ribosomal protein S15 8 88 2.6E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.189 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-28 T 22-04-2016 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.0E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 SUPERFAMILY SSF47060 3 89 2.65E-36 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 TMO_RS17855 814f3bba2cc46d0fd73276ee0343fec2 89 Gene3D G3DSA:1.10.287.10 3 89 7.8E-40 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PANTHER PTHR24322:SF356 10 144 1.6E-51 T 22-04-2016 TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PANTHER PTHR24322:SF356 160 196 1.6E-51 T 22-04-2016 TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 SUPERFAMILY SSF51735 4 249 1.15E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.3E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 Pfam PF00106 short chain dehydrogenase 7 198 6.4E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PANTHER PTHR24322 10 144 1.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PANTHER PTHR24322 160 196 1.6E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 Gene3D G3DSA:3.40.50.720 2 250 1.2E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS15935 cdf18041cb8a35cd6c75825aa9ed8471 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10780 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 SUPERFAMILY SSF103473 2 389 4.45E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS10780 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 Gene3D G3DSA:1.20.1250.20 204 388 2.2E-12 T 22-04-2016 TMO_RS10780 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 Gene3D G3DSA:1.20.1250.20 2 186 1.6E-26 T 22-04-2016 TMO_RS10780 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 PANTHER PTHR23505 1 354 5.9E-19 T 22-04-2016 TMO_RS10780 0b659b6a00c7bb5ca2dc0d2c0bdf7445 408 Pfam PF07690 Major Facilitator Superfamily 6 314 1.3E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 SUPERFAMILY SSF51182 1 175 1.53E-70 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 PANTHER PTHR21047 1 185 1.9E-63 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 173 2.5E-66 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 Gene3D G3DSA:2.60.120.10 1 174 2.0E-73 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 173 4.7E-57 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_RS15325 03638069933402087cdddcd1d4dde2dd 188 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 3.0E-67 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 SUPERFAMILY SSF52172 5 198 2.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 Gene3D G3DSA:3.40.50.2300 5 164 8.0E-40 T 22-04-2016 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 PANTHER PTHR26402 8 242 2.2E-99 T 22-04-2016 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 SMART SM00448 8 118 1.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 240 1.8E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 Gene3D G3DSA:1.10.10.10 165 241 8.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 Pfam PF00072 Response regulator receiver domain 10 119 5.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 SMART SM00862 164 240 1.3E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS02315 389ac5d9a3b456e63f09e1717139ad68 243 PANTHER PTHR26402:SF516 8 242 2.2E-99 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423:SF379 411 637 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423:SF379 124 392 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423:SF379 1 7 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF13188 PAS domain 127 164 2.3E-5 T 22-04-2016 IPR000014 PAS domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00387 359 490 1.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF55874 308 488 2.88E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423 411 637 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423 124 392 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PANTHER PTHR24423 1 7 1.0E-139 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00388 252 318 3.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:1.10.287.130 247 304 5.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF55785 125 203 3.77E-6 T 22-04-2016 IPR000014 PAS domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 316 7.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF00072 Response regulator receiver domain 520 632 1.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF52172 516 637 1.57E-27 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.30.450.20 124 237 5.6E-7 T 22-04-2016 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SUPERFAMILY SSF47384 245 316 1.35E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 433 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 447 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 7.4E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.30.565.10 305 491 1.0E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 SMART SM00448 518 632 8.6E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 488 7.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS05675 112fab82b99fa4dc9068edbe7108aa5c 641 Gene3D G3DSA:3.40.50.2300 516 638 4.7E-31 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 TIGRFAM TIGR00260 thrC: threonine synthase 69 426 4.5E-81 T 22-04-2016 IPR004450 Threonine synthase-like TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.90.1380.10 2 84 6.1E-27 T 22-04-2016 IPR029144 Threonine synthase, N-terminal TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314:SF1 361 467 2.4E-157 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 412 7.5E-21 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314 25 36 2.4E-157 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.40.50.1100 135 201 3.2E-5 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314 53 329 2.4E-157 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314 361 467 2.4E-157 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 Pfam PF14821 Threonine synthase N terminus 2 80 3.1E-27 T 22-04-2016 IPR029144 Threonine synthase, N-terminal TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 SUPERFAMILY SSF53686 2 463 6.68E-160 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314:SF1 25 36 2.4E-157 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 Gene3D G3DSA:3.40.50.1100 202 438 3.3E-95 T 22-04-2016 TMO_RS14135 e7872c299375fb8f282fdfd0aa3fb661 467 PANTHER PTHR10314:SF1 53 329 2.4E-157 T 22-04-2016 TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 Gene3D G3DSA:3.90.650.10 160 346 1.6E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 346 1.1E-75 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 PIRSF PIRSF005303 12 346 7.2E-65 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 165 322 2.0E-12 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 40 150 1.8E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 Gene3D G3DSA:3.30.1330.10 15 153 9.1E-31 T 22-04-2016 IPR016188 PurM-like, N-terminal domain TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 SUPERFAMILY SSF55326 15 151 2.62E-27 T 22-04-2016 TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 SUPERFAMILY SSF56042 159 321 3.14E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 PANTHER PTHR30270 15 346 1.3E-69 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 TMO_RS09145 02fe5f1afda72d2c1d84063742f9dd74 346 PANTHER PTHR30270:SF0 15 346 1.3E-69 T 22-04-2016 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.7E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 Gene3D G3DSA:3.30.70.120 1 112 4.4E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-39 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 SMART SM00938 4 105 4.0E-63 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 SUPERFAMILY SSF54913 1 112 4.45E-43 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PIRSF PIRSF039144 1 112 1.3E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PANTHER PTHR30115 1 112 3.2E-65 T 22-04-2016 TMO_RS15810 3d87ad1fa9af3efab4a9ffacf00782fe 112 PANTHER PTHR30115:SF12 1 112 3.2E-65 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 9 320 7.3E-108 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 PANTHER PTHR30519:SF0 5 769 0.0 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 6 767 36.047 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 440 762 1.7E-145 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 11 766 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 PIRSF PIRSF000382 5 769 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 SUPERFAMILY SSF51726 405 766 7.46E-120 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 Gene3D G3DSA:3.20.20.210 401 768 5.2E-133 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 Gene3D G3DSA:3.20.20.210 8 398 4.3E-137 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 PANTHER PTHR30519 5 769 0.0 T 22-04-2016 TMO_RS12150 a3cf8a54983f197ed861d0a57a6988cf 769 SUPERFAMILY SSF51726 8 403 8.24E-106 T 22-04-2016 TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 SUPERFAMILY SSF46689 11 87 1.33E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 Gene3D G3DSA:1.10.357.10 13 213 4.8E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 PANTHER PTHR30055:SF73 13 178 2.8E-16 T 22-04-2016 TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 SUPERFAMILY SSF48498 95 215 4.45E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 68 4.7E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05980 6e0f842a03e41accf020924e9cea63d2 231 PANTHER PTHR30055 13 178 2.8E-16 T 22-04-2016 TMO_RS18020 4847326afd8057fd7e39935e5aeb3b31 263 PANTHER PTHR21240 54 261 2.6E-18 T 22-04-2016 TMO_RS18020 4847326afd8057fd7e39935e5aeb3b31 263 Gene3D G3DSA:3.20.20.140 15 262 8.8E-44 T 22-04-2016 TMO_RS18020 4847326afd8057fd7e39935e5aeb3b31 263 PANTHER PTHR21240:SF10 54 261 2.6E-18 T 22-04-2016 TMO_RS18020 4847326afd8057fd7e39935e5aeb3b31 263 SUPERFAMILY SSF51556 11 262 1.31E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS18020 4847326afd8057fd7e39935e5aeb3b31 263 Pfam PF04909 Amidohydrolase 50 262 1.1E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 Gene3D G3DSA:3.40.50.2000 163 311 1.0E-32 T 22-04-2016 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 SUPERFAMILY SSF53756 7 311 3.77E-59 T 22-04-2016 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 PANTHER PTHR30160 1 292 5.6E-21 T 22-04-2016 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 PANTHER PTHR30160:SF7 1 292 5.6E-21 T 22-04-2016 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 Gene3D G3DSA:3.40.50.2000 7 147 2.5E-19 T 22-04-2016 TMO_RS01000 0e14b6e5e0d6ac1657dbab46945d60d5 312 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 293 1.1E-23 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 TMO_RS17425 855cb3fd8d7d8f6c300af09ca871c6bf 284 PANTHER PTHR10061 1 284 3.2E-161 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 TMO_RS17425 855cb3fd8d7d8f6c300af09ca871c6bf 284 Pfam PF00756 Putative esterase 21 276 1.0E-56 T 22-04-2016 IPR000801 Putative esterase TMO_RS17425 855cb3fd8d7d8f6c300af09ca871c6bf 284 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 282 1.2E-130 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 TMO_RS17425 855cb3fd8d7d8f6c300af09ca871c6bf 284 Gene3D G3DSA:3.40.50.1820 2 282 3.2E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17425 855cb3fd8d7d8f6c300af09ca871c6bf 284 SUPERFAMILY SSF53474 1 282 2.14E-85 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 314 385 1.0E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 412 53.321 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 SUPERFAMILY SSF52540 63 395 6.93E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 PANTHER PTHR11262 4 416 1.2E-251 T 22-04-2016 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:1.10.8.60 314 413 1.3E-36 T 22-04-2016 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 2.7E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 SMART SM00382 110 330 3.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 SMART SM00994 12 51 1.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 SUPERFAMILY SSF57716 13 48 1.18E-11 T 22-04-2016 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:3.40.50.300 291 308 6.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Gene3D G3DSA:3.40.50.300 64 252 6.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 9.9E-199 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 308 1.7E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS09975 930faccca7dfb18507db848c4542a2ae 422 SMART SM01086 314 409 2.4E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 Hamap MF_01694 Biotin synthase [bioB]. 17 325 41.382 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 SMART SM00729 55 267 1.6E-40 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 PANTHER PTHR22976 13 325 4.8E-153 T 22-04-2016 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 PIRSF PIRSF001619 7 328 3.1E-127 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 TIGRFAM TIGR00433 bioB: biotin synthase 27 322 3.1E-119 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 SUPERFAMILY SSF102114 17 323 1.24E-89 T 22-04-2016 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 PANTHER PTHR22976:SF1 13 325 4.8E-153 T 22-04-2016 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 SMART SM00876 232 324 2.5E-40 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 Pfam PF04055 Radical SAM superfamily 62 217 2.6E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 Gene3D G3DSA:3.20.20.70 18 324 6.7E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS02200 df601c063b02fb4cfbbab2a079ddaa59 328 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 232 322 4.9E-16 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 SUPERFAMILY SSF89550 6 274 8.44E-12 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 SMART SM00481 7 74 7.1E-16 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 PANTHER PTHR32294:SF0 2 1148 0.0 T 22-04-2016 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 Gene3D G3DSA:1.10.150.280 843 896 5.2E-6 T 22-04-2016 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 SUPERFAMILY SSF160975 838 893 4.84E-5 T 22-04-2016 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 Gene3D G3DSA:3.20.20.140 6 267 1.4E-23 T 22-04-2016 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF14579 Helix-hairpin-helix motif 815 908 1.7E-24 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 PANTHER PTHR32294 2 1148 0.0 T 22-04-2016 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF02811 PHP domain 8 179 2.1E-33 T 22-04-2016 IPR004013 PHP domain GO:0003824 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 303 741 2.7E-171 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS08960 e925b60d9346b29ed993234dc70bdff1 1166 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1043 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 PANTHER PTHR18966 25 250 2.4E-64 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 SUPERFAMILY SSF53850 9 254 3.19E-72 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 SMART SM00062 26 253 1.0E-73 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 250 8.4E-79 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 PANTHER PTHR18966:SF152 25 250 2.4E-64 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 Gene3D G3DSA:3.40.190.10 114 209 2.3E-23 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 Gene3D G3DSA:3.40.190.10 212 254 1.6E-47 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 Gene3D G3DSA:3.40.190.10 24 112 1.6E-47 T 22-04-2016 TMO_RS15560 b8638a60fa31a5369d0600ef68bb3ac2 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 251 1.2E-68 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 ProSitePatterns PS00145 Urease active site. 319 335 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PANTHER PTHR22642 25 298 2.9E-259 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PANTHER PTHR22642 322 503 2.9E-259 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 ProSitePatterns PS01120 Urease nickel ligands signature. 129 142 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PANTHER PTHR22642:SF7 25 298 2.9E-259 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PANTHER PTHR22642:SF7 322 503 2.9E-259 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Gene3D G3DSA:3.20.20.140 138 431 3.3E-206 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Gene3D G3DSA:3.20.20.140 490 567 3.3E-206 T 22-04-2016 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 569 5.6E-286 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 121 2.9E-54 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Pfam PF01979 Amidohydrolase family 127 451 4.0E-75 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Hamap MF_01953 Urease subunit alpha [ureC]. 3 569 56.664 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 1.4E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 1.4E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 336 352 1.4E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 297 314 1.4E-33 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 Gene3D G3DSA:2.30.40.10 69 137 4.2E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 SUPERFAMILY SSF51338 4 179 1.14E-58 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 SUPERFAMILY SSF51556 483 569 6.81E-196 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS08695 86d1ff86175881b78ab8e1003cc5942d 569 SUPERFAMILY SSF51556 131 434 6.81E-196 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 SUPERFAMILY SSF48498 87 190 6.81E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 PANTHER PTHR30055 1 213 3.5E-22 T 22-04-2016 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 SUPERFAMILY SSF46689 3 79 1.18E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.2E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 Gene3D G3DSA:1.10.357.10 61 193 4.4E-11 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 87 186 1.6E-9 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 TMO_RS13450 610f343d15d7597f0b1d186117b6854a 231 Gene3D G3DSA:1.10.10.60 3 60 1.1E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 Gene3D G3DSA:3.30.70.1170 163 220 4.9E-13 T 22-04-2016 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 231 431 8.2E-46 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PANTHER PTHR22807:SF33 128 434 5.6E-100 T 22-04-2016 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 Gene3D G3DSA:3.40.50.150 222 433 8.8E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 SUPERFAMILY SSF53335 146 433 1.16E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 309 320 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 Gene3D G3DSA:1.10.940.10 9 67 8.9E-4 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 3.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 416 433 3.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 310 322 3.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 360 376 3.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 3.3E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS07245 76ec359605313225cf2c47ad7ae6ff4c 450 PANTHER PTHR22807 128 434 5.6E-100 T 22-04-2016 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 8.5E-76 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 Pfam PF00347 Ribosomal protein L6 11 82 5.1E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 Pfam PF00347 Ribosomal protein L6 91 164 1.9E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 Gene3D G3DSA:3.90.930.12 83 177 3.3E-39 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 SUPERFAMILY SSF56053 83 177 5.5E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PIRSF PIRSF002162 1 177 1.5E-48 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PANTHER PTHR11655:SF14 1 176 9.3E-87 T 22-04-2016 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.028 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 Gene3D G3DSA:3.90.930.12 2 82 4.3E-32 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PANTHER PTHR11655 1 176 9.3E-87 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 SUPERFAMILY SSF56053 1 82 5.52E-26 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.9E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.9E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS13180 9f195618911f00e439729ad7a6e31472 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.9E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 Pfam PF00989 PAS fold 4 113 1.4E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 PANTHER PTHR24423 1 271 1.3E-40 T 22-04-2016 TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 Gene3D G3DSA:3.30.450.20 2 113 7.8E-23 T 22-04-2016 TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SMART SM00086 194 236 0.0019 T 22-04-2016 IPR001610 PAC motif TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SMART SM00086 76 117 0.87 T 22-04-2016 IPR001610 PAC motif TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 243 1.7E-17 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 2 124 6.6E-28 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SMART SM00091 1 66 1.1E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SMART SM00091 122 188 2.2E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 Pfam PF13426 PAS domain 139 234 3.8E-10 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SUPERFAMILY SSF55785 11 125 8.12E-28 T 22-04-2016 IPR000014 PAS domain TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 Gene3D G3DSA:3.30.450.20 114 233 1.9E-20 T 22-04-2016 TMO_RS20340 28a81e452283a187ff6b492c8d092728 271 SUPERFAMILY SSF55785 116 234 8.77E-21 T 22-04-2016 IPR000014 PAS domain TMO_RS04880 397e267402cbdc85c668882f16258127 124 Pfam PF00581 Rhodanese-like domain 16 106 3.3E-14 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS04880 397e267402cbdc85c668882f16258127 124 PANTHER PTHR12231 30 110 2.7E-13 T 22-04-2016 TMO_RS04880 397e267402cbdc85c668882f16258127 124 Gene3D G3DSA:3.40.250.10 14 111 6.1E-28 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS04880 397e267402cbdc85c668882f16258127 124 SMART SM00450 15 110 5.6E-20 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS04880 397e267402cbdc85c668882f16258127 124 SUPERFAMILY SSF52821 15 114 1.06E-30 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 SUPERFAMILY SSF52540 2 223 4.74E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 1.8E-101 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 PANTHER PTHR24220:SF404 3 227 2.7E-115 T 22-04-2016 TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 PANTHER PTHR24220 3 227 2.7E-115 T 22-04-2016 TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 Gene3D G3DSA:3.40.50.300 1 221 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 Pfam PF00005 ABC transporter 17 161 5.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08675 47dee714270bf1e15118583f35f07b43 231 SMART SM00382 26 217 4.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06470 5244230d841dd786b3dc2a854a59ac10 256 PANTHER PTHR11941 3 252 5.0E-75 T 22-04-2016 TMO_RS06470 5244230d841dd786b3dc2a854a59ac10 256 Gene3D G3DSA:3.90.226.10 3 253 2.5E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS06470 5244230d841dd786b3dc2a854a59ac10 256 PANTHER PTHR11941:SF17 3 252 5.0E-75 T 22-04-2016 TMO_RS06470 5244230d841dd786b3dc2a854a59ac10 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 253 3.4E-46 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS06470 5244230d841dd786b3dc2a854a59ac10 256 SUPERFAMILY SSF52096 3 253 5.9E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS00465 b42561b86e97761dec7836e4dc46410e 279 PANTHER PTHR30269 12 264 6.7E-81 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS00465 b42561b86e97761dec7836e4dc46410e 279 Pfam PF01925 Sulfite exporter TauE/SafE 20 255 9.9E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS00465 b42561b86e97761dec7836e4dc46410e 279 PANTHER PTHR30269:SF0 12 264 6.7E-81 T 22-04-2016 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 331 2.1E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 SUPERFAMILY SSF52540 8 256 4.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 SMART SM00382 37 235 2.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 PANTHER PTHR24220:SF586 10 332 1.4E-125 T 22-04-2016 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 PANTHER PTHR24220 10 332 1.4E-125 T 22-04-2016 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 313 2.5E-12 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 Gene3D G3DSA:3.40.50.300 7 258 9.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01510 f47cc6156cd4dc6c2296f49b7653f124 345 Pfam PF00005 ABC transporter 28 185 2.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 PANTHER PTHR11986:SF8 1 284 1.3E-97 T 22-04-2016 TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 Gene3D G3DSA:3.90.1150.10 175 284 1.6E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 SUPERFAMILY SSF53383 1 285 4.13E-73 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 Pfam PF00202 Aminotransferase class-III 1 284 2.6E-64 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 Gene3D G3DSA:3.40.640.10 1 174 1.9E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS22800 1c7b0590a4a8e4369a728c8f717bb314 288 PANTHER PTHR11986 1 284 1.3E-97 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PANTHER PTHR13789 7 400 3.1E-114 T 22-04-2016 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 4.2E-18 T 22-04-2016 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.2E-18 T 22-04-2016 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 4.2E-18 T 22-04-2016 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.2E-18 T 22-04-2016 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 Gene3D G3DSA:3.50.50.60 7 182 2.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 Gene3D G3DSA:3.50.50.60 268 356 2.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 Pfam PF01494 FAD binding domain 8 347 1.7E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 SUPERFAMILY SSF51905 267 385 1.34E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 SUPERFAMILY SSF51905 7 177 1.34E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 9.9E-135 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 TMO_RS15805 03e59c7708032610ad02fe315847e68b 404 PANTHER PTHR13789:SF5 7 400 3.1E-114 T 22-04-2016 TMO_RS03130 61637bd32749e9849edc408b5643b865 248 SUPERFAMILY SSF53335 29 248 4.56E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS03130 61637bd32749e9849edc408b5643b865 248 Pfam PF13649 Methyltransferase domain 68 164 1.0E-10 T 22-04-2016 TMO_RS03130 61637bd32749e9849edc408b5643b865 248 Gene3D G3DSA:3.40.50.150 29 248 8.4E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 SUPERFAMILY SSF55083 7 179 2.88E-40 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 PANTHER PTHR20941:SF10 1 117 9.1E-41 T 22-04-2016 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 PANTHER PTHR20941:SF10 137 179 9.1E-41 T 22-04-2016 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 PANTHER PTHR20941 1 117 9.1E-41 T 22-04-2016 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 PANTHER PTHR20941 137 179 9.1E-41 T 22-04-2016 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 9 160 5.6E-28 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 160 2.0E-28 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 TMO_RS07990 d8fcfd9aecc3b959cd284c63a82a2cd1 181 Gene3D G3DSA:3.30.70.560 7 179 2.2E-42 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 PANTHER PTHR13779 16 335 1.4E-158 T 22-04-2016 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.0E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 SUPERFAMILY SSF52540 23 254 6.97E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 334 2.0E-29 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:1.10.10.10 260 330 4.9E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 PANTHER PTHR13779:SF25 16 335 1.4E-158 T 22-04-2016 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 353 167.4 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:1.10.8.60 187 258 2.7E-28 T 22-04-2016 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 SMART SM00382 54 181 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 SUPERFAMILY SSF46785 260 333 1.87E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.4E-133 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 238 6.0E-110 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 TMO_RS04535 a77d37bb9322ca660c1240bb61b12982 353 Gene3D G3DSA:3.40.50.300 23 180 4.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12975 87361a502d65b747427d914968f2536e 200 PIRSF PIRSF006386 1 200 4.7E-51 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa TMO_RS12975 87361a502d65b747427d914968f2536e 200 Pfam PF01323 DSBA-like thioredoxin domain 5 193 1.4E-32 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 TMO_RS12975 87361a502d65b747427d914968f2536e 200 SUPERFAMILY SSF52833 5 196 2.43E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12975 87361a502d65b747427d914968f2536e 200 PANTHER PTHR13887 5 196 4.3E-36 T 22-04-2016 TMO_RS12975 87361a502d65b747427d914968f2536e 200 Gene3D G3DSA:3.40.30.10 3 196 1.3E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03484 tRNA synthetase B5 domain 406 472 1.8E-16 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00896 709 801 3.9E-37 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 39.438 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 PANTHER PTHR10947 2 801 1.1E-226 T 22-04-2016 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 PANTHER PTHR10947:SF0 2 801 1.1E-226 T 22-04-2016 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00873 214 387 2.3E-79 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF01588 Putative tRNA binding domain 46 145 1.8E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF50249 36 196 2.35E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.930.10 494 693 5.3E-49 T 22-04-2016 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SMART SM00874 403 472 3.9E-26 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 1.3E-208 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF54991 709 801 2.22E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF56037 202 399 2.88E-64 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF46955 405 477 3.75E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:2.40.50.140 41 154 2.8E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.50.40.10 204 395 3.4E-74 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 SUPERFAMILY SSF55681 468 692 3.98E-35 T 22-04-2016 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03147 Ferredoxin-fold anticodon binding domain 711 801 6.5E-25 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Pfam PF03483 B3/4 domain 214 387 4.1E-59 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.70.380 711 801 4.7E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.56.20 404 476 7.7E-23 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.56.10 155 182 8.4E-24 T 22-04-2016 TMO_RS01025 616357b289c170fd7a7ba70ad75b50ed 802 Gene3D G3DSA:3.30.56.10 1 38 8.4E-24 T 22-04-2016 TMO_RS08585 ed5de002754fe9f8ca7fefa03f00983e 173 PIRSF PIRSF006162 7 169 8.5E-44 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 TMO_RS08585 ed5de002754fe9f8ca7fefa03f00983e 173 PANTHER PTHR36305 2 168 7.4E-47 T 22-04-2016 TMO_RS08585 ed5de002754fe9f8ca7fefa03f00983e 173 SUPERFAMILY SSF101307 13 161 4.84E-34 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 TMO_RS08585 ed5de002754fe9f8ca7fefa03f00983e 173 Pfam PF04608 Phosphatidylglycerophosphatase A 17 162 1.2E-42 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 TMO_RS28490 8ce539ff4c146236c0471d5c38f0495b 96 Pfam PF00005 ABC transporter 1 24 2.6E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS28490 8ce539ff4c146236c0471d5c38f0495b 96 SUPERFAMILY SSF52540 1 95 7.71E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS28490 8ce539ff4c146236c0471d5c38f0495b 96 PANTHER PTHR24220 1 96 3.3E-56 T 22-04-2016 TMO_RS28490 8ce539ff4c146236c0471d5c38f0495b 96 PANTHER PTHR24220:SF336 1 96 3.3E-56 T 22-04-2016 TMO_RS28490 8ce539ff4c146236c0471d5c38f0495b 96 Gene3D G3DSA:3.40.50.300 1 96 5.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10635 b201a8df3a144ebcb7bf84b34207973e 491 PANTHER PTHR30582 41 331 5.1E-78 T 22-04-2016 TMO_RS10635 b201a8df3a144ebcb7bf84b34207973e 491 SUPERFAMILY SSF141523 113 249 3.01E-30 T 22-04-2016 TMO_RS10635 b201a8df3a144ebcb7bf84b34207973e 491 PANTHER PTHR30582:SF1 41 331 5.1E-78 T 22-04-2016 TMO_RS10635 b201a8df3a144ebcb7bf84b34207973e 491 Pfam PF03734 L,D-transpeptidase catalytic domain 119 248 2.4E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 TMO_RS10635 b201a8df3a144ebcb7bf84b34207973e 491 Gene3D G3DSA:2.40.440.10 112 249 2.1E-33 T 22-04-2016 TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 123 1.5E-10 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 PANTHER PTHR12418:SF18 8 144 3.0E-30 T 22-04-2016 TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 PANTHER PTHR12418 8 144 3.0E-30 T 22-04-2016 TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 Pfam PF03061 Thioesterase superfamily 60 131 7.2E-8 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 Gene3D G3DSA:3.10.129.10 20 143 3.4E-20 T 22-04-2016 IPR029069 HotDog domain TMO_RS00705 eed17b5c776da289601ec4c4cefcc4d5 144 SUPERFAMILY SSF54637 16 143 3.73E-20 T 22-04-2016 IPR029069 HotDog domain TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 5 82 3.9E-33 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 Gene3D G3DSA:1.10.260.40 4 82 1.9E-33 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 PANTHER PTHR36924 1 88 1.2E-35 T 22-04-2016 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 Pfam PF01381 Helix-turn-helix 19 68 1.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 PANTHER PTHR36924:SF1 1 88 1.2E-35 T 22-04-2016 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 SMART SM00530 13 69 3.1E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS08395 6eb6e55c9b778fb6093f5a0989c03b06 97 SUPERFAMILY SSF47413 9 83 1.78E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS28970 141657a588e104bde0075cf578880c40 444 PANTHER PTHR11712 33 437 1.5E-57 T 22-04-2016 TMO_RS28970 141657a588e104bde0075cf578880c40 444 Gene3D G3DSA:3.40.47.10 32 285 1.0E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS28970 141657a588e104bde0075cf578880c40 444 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 32 275 1.1E-37 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal TMO_RS28970 141657a588e104bde0075cf578880c40 444 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 186 202 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site TMO_RS28970 141657a588e104bde0075cf578880c40 444 SUPERFAMILY SSF53901 249 436 1.02E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS28970 141657a588e104bde0075cf578880c40 444 Gene3D G3DSA:3.40.47.10 306 437 3.2E-32 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS28970 141657a588e104bde0075cf578880c40 444 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 285 394 3.7E-18 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal TMO_RS28970 141657a588e104bde0075cf578880c40 444 SUPERFAMILY SSF53901 32 277 1.28E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS28970 141657a588e104bde0075cf578880c40 444 SMART SM00825 Beta-ketoacyl synthase 33 441 5.6E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain TMO_RS03590 21f7633e17b8b844082ef1f8a0a71226 227 PANTHER PTHR30576:SF4 23 227 8.9E-89 T 22-04-2016 TMO_RS03590 21f7633e17b8b844082ef1f8a0a71226 227 PANTHER PTHR30576 23 227 8.9E-89 T 22-04-2016 TMO_RS03590 21f7633e17b8b844082ef1f8a0a71226 227 Pfam PF02397 Bacterial sugar transferase 30 220 3.5E-54 T 22-04-2016 IPR003362 Bacterial sugar transferase TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 214 299 4.1E-37 T 22-04-2016 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF52540 6 221 4.59E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PANTHER PTHR23115:SF151 1 395 1.1E-254 T 22-04-2016 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.3E-60 T 22-04-2016 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50465 300 395 1.18E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:3.40.50.300 4 213 8.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.2E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50447 207 303 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 8.1E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.556 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 7.1E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 PANTHER PTHR23115 1 395 1.1E-254 T 22-04-2016 TMO_RS13335 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 302 394 4.0E-46 T 22-04-2016 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 214 299 4.1E-37 T 22-04-2016 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF52540 6 221 4.59E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PANTHER PTHR23115:SF151 1 395 1.1E-254 T 22-04-2016 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 6.3E-60 T 22-04-2016 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50465 300 395 1.18E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:3.40.50.300 4 213 8.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.2E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 SUPERFAMILY SSF50447 207 303 4.71E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 8.1E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.556 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 7.1E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 PANTHER PTHR23115 1 395 1.1E-254 T 22-04-2016 TMO_RS13265 f763ac9e68df434d58434472cc5b0119 396 Gene3D G3DSA:2.40.30.10 302 394 4.0E-46 T 22-04-2016 TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Gene3D G3DSA:3.40.250.10 118 230 6.6E-23 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Gene3D G3DSA:3.40.250.10 2 108 7.7E-20 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SUPERFAMILY SSF52821 251 355 2.75E-28 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SMART SM00450 3 101 4.5E-12 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SMART SM00450 127 225 9.1E-8 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SMART SM00450 262 358 2.8E-15 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Gene3D G3DSA:3.40.250.10 376 474 6.0E-9 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 PANTHER PTHR12231 277 393 7.5E-23 T 22-04-2016 TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 PANTHER PTHR12231:SF83 277 393 7.5E-23 T 22-04-2016 TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SUPERFAMILY SSF52821 102 232 6.68E-33 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Pfam PF00581 Rhodanese-like domain 127 221 1.4E-10 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Pfam PF00581 Rhodanese-like domain 4 97 2.9E-10 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Pfam PF00581 Rhodanese-like domain 271 352 1.8E-11 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 Gene3D G3DSA:3.40.250.10 254 354 9.3E-23 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SUPERFAMILY SSF52821 2 117 2.88E-26 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11445 d9edb7b3805f628e8157c1a3aeedc6ff 539 SUPERFAMILY SSF52821 372 524 7.27E-17 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS11150 9a8860f66c357fd942c915cb8e65564f 503 PANTHER PTHR35369 5 503 1.3E-85 T 22-04-2016 TMO_RS11150 9a8860f66c357fd942c915cb8e65564f 503 SUPERFAMILY SSF56672 5 230 5.23E-37 T 22-04-2016 TMO_RS11150 9a8860f66c357fd942c915cb8e65564f 503 Pfam PF00817 impB/mucB/samB family 25 152 3.8E-8 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS11150 9a8860f66c357fd942c915cb8e65564f 503 PANTHER PTHR35369:SF2 5 503 1.3E-85 T 22-04-2016 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 PANTHER PTHR11780:SF12 157 251 7.7E-20 T 22-04-2016 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 Pfam PF01903 CbiX 21 125 1.2E-4 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 Gene3D G3DSA:3.40.50.1400 13 131 3.3E-7 T 22-04-2016 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 SUPERFAMILY SSF53800 19 134 3.92E-8 T 22-04-2016 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 SUPERFAMILY SSF52833 155 249 1.23E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 PANTHER PTHR11780 157 251 7.7E-20 T 22-04-2016 TMO_RS29500 99c9c377860bc57995de7664ce3ce562 253 Gene3D G3DSA:3.40.30.10 155 250 1.5E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07310 6901faf694e249cee8663346dc601b70 404 TIGRFAM TIGR03794 NHLM_micro_HlyD: NHLM bacteriocin system secretion protein 3 393 4.7E-68 T 22-04-2016 IPR022275 NHPM bacteriocin system secretion protein, HylD TMO_RS07310 6901faf694e249cee8663346dc601b70 404 Gene3D G3DSA:2.40.50.100 221 252 1.3E-9 T 22-04-2016 TMO_RS07310 6901faf694e249cee8663346dc601b70 404 Gene3D G3DSA:2.40.50.100 46 77 1.3E-9 T 22-04-2016 TMO_RS07310 6901faf694e249cee8663346dc601b70 404 PANTHER PTHR30386 1 309 7.9E-25 T 22-04-2016 TMO_RS07310 6901faf694e249cee8663346dc601b70 404 Pfam PF13437 HlyD family secretion protein 223 318 1.5E-8 T 22-04-2016 TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 Gene3D G3DSA:1.25.40.10 57 235 1.8E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 SMART SM00671 115 152 2.1 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 SMART SM00671 79 114 1.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 SMART SM00671 153 188 60.0 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 SMART SM00671 189 222 240.0 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 Pfam PF08238 Sel1 repeat 115 151 4.0E-5 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 Pfam PF08238 Sel1 repeat 79 114 3.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 PANTHER PTHR11102 58 229 1.4E-19 T 22-04-2016 TMO_RS29480 d527a8a7b154dc6a6f3effaea5dcd943 256 SUPERFAMILY SSF81901 56 230 4.45E-26 T 22-04-2016 TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 SUPERFAMILY SSF51735 3 96 3.94E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 Pfam PF00107 Zinc-binding dehydrogenase 265 355 3.8E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 SMART SM00829 126 411 8.3E-136 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 PANTHER PTHR11712 4 409 3.5E-126 T 22-04-2016 TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 SUPERFAMILY SSF51735 227 386 6.07E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 143 203 1.5E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 Gene3D G3DSA:3.90.180.10 126 203 7.3E-16 T 22-04-2016 IPR011032 GroES-like TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 SUPERFAMILY SSF50129 122 255 6.24E-32 T 22-04-2016 IPR011032 GroES-like TMO_RS23135 c21f4b4676ae320dc3dacdf8377d2db8 411 Gene3D G3DSA:3.40.50.720 218 409 3.3E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15795 694796ca5e767505251554fa68fe0298 70 Pfam PF03966 Trm112p-like protein 13 52 4.0E-9 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 TMO_RS15795 694796ca5e767505251554fa68fe0298 70 PANTHER PTHR33505 8 66 5.9E-25 T 22-04-2016 TMO_RS15795 694796ca5e767505251554fa68fe0298 70 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 12 65 27.556 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 TMO_RS15795 694796ca5e767505251554fa68fe0298 70 SUPERFAMILY SSF158997 12 66 6.15E-21 T 22-04-2016 TMO_RS15795 694796ca5e767505251554fa68fe0298 70 Gene3D G3DSA:2.20.25.10 19 65 3.8E-25 T 22-04-2016 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.9E-146 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 PANTHER PTHR18919:SF95 1 390 2.6E-223 T 22-04-2016 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 PIRSF PIRSF000429 1 390 2.2E-128 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 PANTHER PTHR18919 1 390 2.6E-223 T 22-04-2016 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 275 389 9.4E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 141 192 9.4E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 SUPERFAMILY SSF53901 269 390 7.79E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 SUPERFAMILY SSF53901 3 267 1.27E-86 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 3 123 5.3E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Gene3D G3DSA:3.40.47.10 193 274 5.3E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Pfam PF02803 Thiolase, C-terminal domain 269 390 3.5E-51 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.8E-104 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS00800 ba0b1c7b8759fba080ccd7c08548bb10 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 126 138 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 8 22 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 106 114 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 171 184 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.4E-33 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 Gene3D G3DSA:3.40.50.880 6 196 1.7E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PANTHER PTHR11922:SF7 7 193 5.0E-79 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.2E-13 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.2E-13 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.2E-13 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 3.4E-9 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 3.4E-9 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 Pfam PF00117 Glutamine amidotransferase class-I 10 193 3.8E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 PANTHER PTHR11922 7 193 5.0E-79 T 22-04-2016 TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 SUPERFAMILY SSF52317 7 196 2.89E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS08835 b94d5463c2fe220b33ecd9e4ae4bbe20 207 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 8 193 6.0E-65 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS03695 f5fd4f236463b424def20cdd13a14d99 112 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 11 108 6.3E-32 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS03695 f5fd4f236463b424def20cdd13a14d99 112 PIRSF PIRSF028291 1 111 1.3E-23 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 SMART SM00052 228 473 2.7E-77 T 22-04-2016 IPR001633 EAL domain TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 Gene3D G3DSA:3.20.20.450 232 474 1.3E-70 T 22-04-2016 IPR001633 EAL domain TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 Pfam PF12792 CSS motif domain associated with EAL 6 194 5.1E-28 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 Pfam PF00563 EAL domain 235 468 1.9E-60 T 22-04-2016 IPR001633 EAL domain TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 SUPERFAMILY SSF141868 233 475 1.57E-69 T 22-04-2016 IPR001633 EAL domain TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 PANTHER PTHR33121:SF16 4 474 1.1E-70 T 22-04-2016 TMO_RS10620 39d0401e4d218aa8a68c034072ee1310 476 PANTHER PTHR33121 4 474 1.1E-70 T 22-04-2016 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 PANTHER PTHR11002:SF17 3 234 1.0E-74 T 22-04-2016 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 82 89 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 SUPERFAMILY SSF53056 25 234 3.66E-51 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 27 8.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 Gene3D G3DSA:3.40.1050.10 30 234 1.9E-49 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 119 139 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 PANTHER PTHR11002 3 234 1.0E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 Pfam PF00484 Carbonic anhydrase 77 231 3.4E-35 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS01060 a335014c9b1ed00ed553af210854067a 234 SMART SM00947 70 234 6.7E-47 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 PANTHER PTHR24220 3 234 1.2E-109 T 22-04-2016 TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 Pfam PF00005 ABC transporter 17 163 7.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 SMART SM00382 26 214 3.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 PANTHER PTHR24220:SF568 3 234 1.2E-109 T 22-04-2016 TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 Gene3D G3DSA:3.40.50.300 1 231 2.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15595 d3c8e8053b5e210c81d4d1108a8f7eb2 235 SUPERFAMILY SSF52540 2 233 1.41E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 PANTHER PTHR11772 2 395 1.5E-115 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 PANTHER PTHR11772 438 550 1.5E-115 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 SUPERFAMILY SSF56235 1 225 5.75E-54 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 Pfam PF13537 Glutamine amidotransferase domain 47 171 3.2E-33 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 Pfam PF00733 Asparagine synthase 252 585 2.9E-74 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 Gene3D G3DSA:3.40.50.620 442 585 3.3E-69 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 Gene3D G3DSA:3.40.50.620 241 390 3.3E-69 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 PIRSF PIRSF001589 1 602 8.8E-156 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 526 3.6E-112 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 Gene3D G3DSA:3.60.20.10 1 225 1.6E-60 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 PANTHER PTHR11772:SF10 2 395 1.5E-115 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 PANTHER PTHR11772:SF10 438 550 1.5E-115 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 SUPERFAMILY SSF52402 243 393 1.11E-63 T 22-04-2016 TMO_RS05000 510be92b83642c81bcba63207bbc7535 604 SUPERFAMILY SSF52402 446 542 1.11E-63 T 22-04-2016 TMO_RS06380 f12db595a3c68931c0f386be17102817 202 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 62 200 4.5E-40 T 22-04-2016 IPR023928 Conserved hypothetical protein CHP03979 TMO_RS06380 f12db595a3c68931c0f386be17102817 202 Gene3D G3DSA:1.10.101.10 143 197 9.7E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like TMO_RS06380 f12db595a3c68931c0f386be17102817 202 Pfam PF01471 Putative peptidoglycan binding domain 145 197 5.1E-14 T 22-04-2016 IPR002477 Peptidoglycan binding-like TMO_RS06380 f12db595a3c68931c0f386be17102817 202 SUPERFAMILY SSF47090 139 198 2.04E-14 T 22-04-2016 IPR002477 Peptidoglycan binding-like TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 83 4.0E-15 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 8.4E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 8.4E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 8.4E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.197 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 Pfam PF01016 Ribosomal L27 protein 2 81 2.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 SUPERFAMILY SSF110324 2 82 4.53E-35 T 22-04-2016 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.6E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 PANTHER PTHR15893 1 85 2.2E-51 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14950 e5d9da4f38705b08649bab285ad01d32 86 Gene3D G3DSA:2.40.50.100 20 83 2.0E-32 T 22-04-2016 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Gene3D G3DSA:3.20.20.140 4 236 5.8E-9 T 22-04-2016 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 SUPERFAMILY SSF89550 10 243 3.92E-6 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 983 1.0E-152 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF01336 OB-fold nucleic acid binding domain 948 1021 6.5E-9 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 PANTHER PTHR32294 1 1029 0.0 T 22-04-2016 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1088 13.276 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF02811 PHP domain 5 121 3.4E-10 T 22-04-2016 IPR004013 PHP domain GO:0003824 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF14579 Helix-hairpin-helix motif 768 859 1.8E-22 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Gene3D G3DSA:2.40.50.140 937 1011 3.2E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 272 695 7.4E-140 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 PANTHER PTHR32294:SF4 1 1029 0.0 T 22-04-2016 TMO_RS11145 f5cd5e560a767704761fa2f97721dbe8 1088 SMART SM00481 4 71 7.1E-10 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 TMO_RS00080 03316b4bc8e3a53db57aee6584ddeb6b 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 9.6E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00080 03316b4bc8e3a53db57aee6584ddeb6b 261 SUPERFAMILY SSF161098 3 255 2.62E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00080 03316b4bc8e3a53db57aee6584ddeb6b 261 PANTHER PTHR30193 4 254 1.4E-65 T 22-04-2016 TMO_RS00080 03316b4bc8e3a53db57aee6584ddeb6b 261 Gene3D G3DSA:1.10.3720.10 1 256 4.3E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00080 03316b4bc8e3a53db57aee6584ddeb6b 261 PANTHER PTHR30193:SF20 4 254 1.4E-65 T 22-04-2016 TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 35 164 32.781 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 SUPERFAMILY SSF54211 39 164 5.69E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 Pfam PF00380 Ribosomal protein S9/S16 44 164 5.3E-48 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 Gene3D G3DSA:3.30.230.10 39 164 1.1E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 PANTHER PTHR21569 23 164 3.6E-70 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 TMO_RS08990 36d0867d6614349bef58e4de7497c900 164 ProSitePatterns PS00360 Ribosomal protein S9 signature. 103 121 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 SMART SM00382 274 476 14.0 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 SMART SM00382 20 208 5.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 Gene3D G3DSA:3.40.50.300 2 220 2.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 SUPERFAMILY SSF52540 2 218 8.35E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 Gene3D G3DSA:3.40.50.300 244 473 5.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 Pfam PF00005 ABC transporter 265 416 1.2E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 Pfam PF00005 ABC transporter 11 159 1.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 PANTHER PTHR24220 1 373 1.1E-144 T 22-04-2016 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 PANTHER PTHR24220:SF239 1 373 1.1E-144 T 22-04-2016 TMO_RS06000 1d2ae03f476535149ccc800b1d4996cf 491 SUPERFAMILY SSF52540 249 473 2.72E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 Pfam PF00154 recA bacterial DNA recombination protein 18 279 1.4E-147 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 15 335 1.8E-177 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 SUPERFAMILY SSF54752 279 338 2.62E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 176 205 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 308 325 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 104 133 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 138 167 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 221 249 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PRINTS PR00142 RecA protein signature 254 283 5.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 Hamap MF_00268 Protein RecA [recA]. 16 340 52.973 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 Gene3D G3DSA:3.30.250.10 279 337 1.5E-30 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 ProSitePatterns PS00321 recA signature. 224 232 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PANTHER PTHR22942 1 346 4.0E-209 T 22-04-2016 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 Gene3D G3DSA:3.40.50.300 38 278 2.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 PANTHER PTHR22942:SF1 1 346 4.0E-209 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 SUPERFAMILY SSF52540 16 278 1.09E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05685 e27bf55f77cfa4733b816951000c0072 361 SMART SM00382 68 239 8.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 PANTHER PTHR30294:SF21 18 276 8.2E-35 T 22-04-2016 TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 Pfam PF01061 ABC-2 type transporter 22 233 2.5E-15 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 1.1E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 PRINTS PR00164 ABC-2 type transport system membrane protein signature 153 177 1.1E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 PRINTS PR00164 ABC-2 type transport system membrane protein signature 211 230 1.1E-5 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS00100 bb72317d99ce75cd38c06536fbb82694 279 PANTHER PTHR30294 18 276 8.2E-35 T 22-04-2016 TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 PANTHER PTHR30136 26 257 2.8E-57 T 22-04-2016 TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 PANTHER PTHR30136:SF3 26 257 2.8E-57 T 22-04-2016 TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 SUPERFAMILY SSF55781 93 257 2.42E-38 T 22-04-2016 IPR029016 GAF domain-like TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 SUPERFAMILY SSF46785 28 98 3.24E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 Gene3D G3DSA:1.10.10.10 24 97 8.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 SMART SM00346 28 118 4.3E-19 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 Pfam PF09339 IclR helix-turn-helix domain 30 81 1.1E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 Pfam PF01614 Bacterial transcriptional regulator 179 254 2.2E-16 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS01780 d0178bd907740913b5c78f21cd27364a 257 Gene3D G3DSA:3.30.450.40 98 257 5.0E-40 T 22-04-2016 IPR029016 GAF domain-like TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF110942 522 643 4.84E-25 T 22-04-2016 TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PANTHER PTHR11528 6 645 1.7E-263 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 SMART SM00387 31 186 2.5E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF55874 9 215 1.02E-59 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 Hamap MF_00505 Chaperone protein HtpG [htpG]. 6 643 29.263 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PANTHER PTHR11528:SF44 6 645 1.7E-263 T 22-04-2016 TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 Gene3D G3DSA:3.30.565.10 9 239 1.5E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 SUPERFAMILY SSF54211 232 483 7.59E-85 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 185 1.3E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 124 146 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 9 29 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 192 210 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 97 114 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 174 191 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 30 52 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PRINTS PR00775 90kDa heat shock protein signature 79 96 4.3E-54 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 PIRSF PIRSF002583 2 648 7.0E-189 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 TMO_RS15420 27dfebb65d707d9af31ec5cb726768f1 648 Pfam PF00183 Hsp90 protein 224 644 1.3E-96 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 Gene3D G3DSA:3.60.110.10 6 283 1.9E-99 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 6 283 1.7E-138 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 SUPERFAMILY SSF56317 5 283 8.37E-89 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 PANTHER PTHR23088:SF26 6 287 2.0E-142 T 22-04-2016 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 PANTHER PTHR23088 6 287 2.0E-142 T 22-04-2016 TMO_RS12915 0bd16c1f1475887298beec795675af57 293 Pfam PF00795 Carbon-nitrogen hydrolase 7 267 6.3E-56 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 6.7E-12 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 SMART SM00859 4 120 7.7E-7 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 Gene3D G3DSA:3.40.50.720 5 142 1.1E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 PIRSF PIRSF000148 4 343 9.7E-69 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 322 7.6E-22 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 Gene3D G3DSA:3.30.360.10 143 320 4.4E-38 T 22-04-2016 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 SUPERFAMILY SSF55347 134 325 6.22E-37 T 22-04-2016 TMO_RS16415 95f3e75ff57454cc17d72e6052b59c5b 352 SUPERFAMILY SSF51735 5 157 6.94E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 PANTHER PTHR30437:SF5 15 137 3.7E-28 T 22-04-2016 TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 Gene3D G3DSA:1.10.286.20 17 58 1.9E-5 T 22-04-2016 TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 Gene3D G3DSA:3.10.50.30 61 137 5.6E-18 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 PANTHER PTHR30437 15 137 3.7E-28 T 22-04-2016 TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 64 137 1.3E-12 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 Pfam PF14760 Rnk N-terminus 18 58 7.7E-11 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain TMO_RS08160 aec4f0dbe689d6d00cd32aecc533490e 138 SUPERFAMILY SSF54534 64 137 6.02E-11 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF52343 201 331 4.58E-38 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF63380 103 198 1.11E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:2.40.30.10 103 198 4.7E-27 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Pfam PF00970 Oxidoreductase FAD-binding domain 106 197 2.3E-13 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PANTHER PTHR19370:SF32 34 330 3.7E-61 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PANTHER PTHR19370 34 330 3.7E-61 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 81 3.7E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Pfam PF00175 Oxidoreductase NAD-binding domain 210 311 1.1E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:3.40.50.80 202 330 1.3E-37 T 22-04-2016 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 Gene3D G3DSA:3.10.20.30 4 89 7.8E-26 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS11290 50c44da4b49ce60a292324424559b836 344 SUPERFAMILY SSF54292 4 89 5.77E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 149 156 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS11290 50c44da4b49ce60a292324424559b836 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 2.17E-23 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:2.40.40.20 600 760 1.1E-57 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 452 469 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.40.50.740 350 453 5.0E-39 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.40.50.740 46 146 5.0E-39 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.40.228.10 147 349 7.5E-43 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 SUPERFAMILY SSF53706 10 625 8.34E-152 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Pfam PF01568 Molydopterin dinucleotide binding domain 624 744 3.6E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 SUPERFAMILY SSF50692 617 764 1.29E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Pfam PF00384 Molybdopterin oxidoreductase 53 507 1.0E-65 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 PANTHER PTHR11615 1 768 5.8E-243 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 Gene3D G3DSA:3.90.55.10 454 556 2.4E-34 T 22-04-2016 TMO_RS07155 61e73d4bc6489a02f671be06ae9021c7 771 PANTHER PTHR11615:SF19 1 768 5.8E-243 T 22-04-2016 TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 PIRSF PIRSF004930 2 339 2.5E-88 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 11 206 1.9E-51 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 Pfam PF03481 Putative GTP-binding controlling metal-binding 201 336 2.8E-13 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 SUPERFAMILY SSF55821 12 209 1.07E-57 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 Gene3D G3DSA:3.90.870.10 10 205 1.6E-68 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 Pfam PF01300 Telomere recombination 25 198 3.7E-49 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 PANTHER PTHR17490:SF3 11 244 2.0E-85 T 22-04-2016 TMO_RS11775 797e778900a6b155b86a10f2c73d0d73 339 PANTHER PTHR17490 11 244 2.0E-85 T 22-04-2016 TMO_RS08705 ebf37eee360a82b9fec6d08606876e5d 262 PIRSF PIRSF009467 35 262 2.2E-59 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_RS08705 ebf37eee360a82b9fec6d08606876e5d 262 PANTHER PTHR33620 35 262 2.2E-34 T 22-04-2016 TMO_RS08705 ebf37eee360a82b9fec6d08606876e5d 262 Pfam PF01730 UreF 71 219 4.9E-28 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_RS08705 ebf37eee360a82b9fec6d08606876e5d 262 Hamap MF_01385 Urease accessory protein UreF [ureF]. 38 262 28.305 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 SUPERFAMILY SSF52540 17 274 2.66E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 PANTHER PTHR24220 20 122 1.1E-117 T 22-04-2016 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 PANTHER PTHR24220 141 277 1.1E-117 T 22-04-2016 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 Gene3D G3DSA:3.40.50.300 16 272 6.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 PANTHER PTHR24220:SF358 20 122 1.1E-117 T 22-04-2016 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 PANTHER PTHR24220:SF358 141 277 1.1E-117 T 22-04-2016 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 Pfam PF00005 ABC transporter 35 201 4.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 251 273 4.7E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS10305 1809087f401a8650d54101c2fdb6dff9 295 SMART SM00382 43 251 7.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 SUPERFAMILY SSF46785 34 142 5.12E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:1.10.10.10 31 114 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 SUPERFAMILY SSF53850 123 332 1.01E-33 T 22-04-2016 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 95 2.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 PANTHER PTHR30537 30 331 1.9E-82 T 22-04-2016 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:3.40.190.10 125 199 4.6E-26 T 22-04-2016 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 63 73 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 73 84 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 Pfam PF03466 LysR substrate binding domain 122 327 1.7E-29 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 PANTHER PTHR30537:SF26 30 331 1.9E-82 T 22-04-2016 TMO_RS01190 d002c1302be4921f7fe6a651b6e22eb5 333 Gene3D G3DSA:3.40.190.10 200 294 1.3E-14 T 22-04-2016 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 Pfam PF01381 Helix-turn-helix 15 67 8.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 Gene3D G3DSA:1.10.260.40 9 68 8.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 SUPERFAMILY SSF47413 2 75 7.32E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 SMART SM00530 14 69 2.4E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 PANTHER PTHR10245:SF37 1 66 6.9E-15 T 22-04-2016 TMO_RS17540 b84f50ca1814d66434f72486001ef222 90 PANTHER PTHR10245 1 66 6.9E-15 T 22-04-2016 TMO_RS09825 dee701c24afb42ccda6e0a55facef704 430 PANTHER PTHR11119:SF9 1 418 8.6E-164 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 TMO_RS09825 dee701c24afb42ccda6e0a55facef704 430 PIRSF PIRSF005353 1 430 1.1E-181 T 22-04-2016 IPR026033 Purine permease PbuG-like TMO_RS09825 dee701c24afb42ccda6e0a55facef704 430 Pfam PF00860 Permease family 18 391 1.8E-51 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS09825 dee701c24afb42ccda6e0a55facef704 430 PANTHER PTHR11119 1 418 8.6E-164 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 SUPERFAMILY SSF53335 29 263 9.97E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 268 1.8E-84 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 PANTHER PTHR10108 20 268 2.2E-112 T 22-04-2016 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 269 37.267 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 177 191 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 PANTHER PTHR10108:SF24 20 268 2.2E-112 T 22-04-2016 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 268 8.9E-77 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 TMO_RS17930 24b4bc8f055bfbf33a47103048aebd6e 270 Gene3D G3DSA:3.40.50.150 33 268 9.4E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 SUPERFAMILY SSF51735 5 138 3.28E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 315 52.905 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 PANTHER PTHR32338 4 328 4.9E-127 T 22-04-2016 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 SUPERFAMILY SSF55347 118 296 4.58E-33 T 22-04-2016 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 SMART SM00859 6 107 1.6E-17 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 Gene3D G3DSA:3.30.360.10 127 296 2.5E-36 T 22-04-2016 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 49 101 5.3E-6 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 315 2.1E-133 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 Gene3D G3DSA:3.40.50.720 42 126 2.6E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 PANTHER PTHR32338:SF9 4 328 4.9E-127 T 22-04-2016 TMO_RS04750 7628de142c6c049df74353c5427b7f99 332 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 113 129 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS01605 a2d19928a031044623389c5ec807c986 267 SUPERFAMILY SSF64438 11 265 1.21E-69 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic TMO_RS01605 a2d19928a031044623389c5ec807c986 267 PANTHER PTHR30616 101 267 2.2E-62 T 22-04-2016 TMO_RS01605 a2d19928a031044623389c5ec807c986 267 PANTHER PTHR30616 9 84 2.2E-62 T 22-04-2016 TMO_RS01605 a2d19928a031044623389c5ec807c986 267 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 263 1.9E-60 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase TMO_RS01605 a2d19928a031044623389c5ec807c986 267 Gene3D G3DSA:3.60.140.10 11 265 8.9E-75 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase TMO_RS01605 a2d19928a031044623389c5ec807c986 267 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 33 265 1.6E-44 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase TMO_RS16790 6e22729d86a7d63c9deb4f37a2dee96c 135 Gene3D G3DSA:2.60.40.1470 8 131 1.2E-49 T 22-04-2016 IPR007474 ApaG domain TMO_RS16790 6e22729d86a7d63c9deb4f37a2dee96c 135 Pfam PF04379 Protein of unknown function (DUF525) 25 109 2.3E-36 T 22-04-2016 IPR007474 ApaG domain TMO_RS16790 6e22729d86a7d63c9deb4f37a2dee96c 135 Hamap MF_00791 Protein ApaG [apaG]. 7 132 33.164 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG TMO_RS16790 6e22729d86a7d63c9deb4f37a2dee96c 135 SUPERFAMILY SSF110069 10 133 2.62E-50 T 22-04-2016 IPR007474 ApaG domain TMO_RS16790 6e22729d86a7d63c9deb4f37a2dee96c 135 PANTHER PTHR14289 8 128 1.1E-57 T 22-04-2016 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 440 3.2E-153 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Gene3D G3DSA:3.90.550.10 2 251 7.2E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Pfam PF12804 MobA-like NTP transferase domain 6 138 3.2E-19 T 22-04-2016 IPR025877 MobA-like NTP transferase TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Gene3D G3DSA:2.160.10.10 252 324 8.6E-18 T 22-04-2016 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 SUPERFAMILY SSF51161 258 430 3.38E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 PANTHER PTHR22572 5 439 6.7E-180 T 22-04-2016 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 312 342 4.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 272 306 1.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 442 38.875 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 PANTHER PTHR22572:SF115 5 439 6.7E-180 T 22-04-2016 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 385 419 5.3E-8 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 SUPERFAMILY SSF53448 4 313 4.28E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 393 421 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 TMO_RS12795 a71ad40d7b421071f484525f1274ad07 454 Gene3D G3DSA:2.160.10.10 325 439 5.8E-29 T 22-04-2016 TMO_RS08605 0f6cc0fb775fd5502ef7647c852d60a9 166 PANTHER PTHR12901 1 153 3.8E-56 T 22-04-2016 TMO_RS08605 0f6cc0fb775fd5502ef7647c852d60a9 166 Gene3D G3DSA:3.30.530.20 1 152 1.5E-51 T 22-04-2016 IPR023393 START-like domain TMO_RS08605 0f6cc0fb775fd5502ef7647c852d60a9 166 SUPERFAMILY SSF55961 1 151 2.96E-33 T 22-04-2016 TMO_RS08605 0f6cc0fb775fd5502ef7647c852d60a9 166 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 143 1.1E-27 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF14824 Sirohaem biosynthesis protein central 99 125 2.4E-6 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.40.50.720 2 91 5.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF10414 Sirohaem synthase dimerisation region 131 163 9.6E-6 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 SUPERFAMILY SSF53790 184 420 1.96E-62 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 SUPERFAMILY SSF75615 94 165 8.63E-20 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 PIRSF PIRSF036426 1 434 3.1E-109 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 PANTHER PTHR21091 14 32 1.1E-53 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 PANTHER PTHR21091 155 391 1.1E-53 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF13241 Putative NAD(P)-binding 1 95 2.6E-6 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 187 421 8.2E-76 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.30.160.110 94 128 1.2E-12 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 PANTHER PTHR21091:SF16 14 32 1.1E-53 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 PANTHER PTHR21091:SF16 155 391 1.1E-53 T 22-04-2016 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 165 2.4E-28 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 191 396 3.9E-40 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:1.10.8.210 131 162 6.6E-5 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.40.1010.10 186 302 8.0E-38 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 Gene3D G3DSA:3.30.950.10 303 423 8.4E-28 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS10825 eae0e3cbd61698ff78edaa2dc1852df8 437 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 267 300 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 175 272 1.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 SUPERFAMILY SSF56935 134 824 2.25E-127 T 22-04-2016 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 SMART SM00965 77 128 4.2E-11 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 Gene3D G3DSA:2.170.130.10 153 279 3.9E-35 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 PANTHER PTHR32552 127 142 1.4E-171 T 22-04-2016 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 PANTHER PTHR32552 166 824 1.4E-171 T 22-04-2016 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 Pfam PF00593 TonB dependent receptor 577 808 5.8E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 PANTHER PTHR32552:SF10 127 142 1.4E-171 T 22-04-2016 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 PANTHER PTHR32552:SF10 166 824 1.4E-171 T 22-04-2016 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 176 824 1.8E-103 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS13620 bb13954214f5333ee28d4895ae64fb64 824 Gene3D G3DSA:2.40.170.20 288 824 1.4E-136 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 PANTHER PTHR30600:SF7 331 366 9.5E-81 T 22-04-2016 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 PANTHER PTHR30600:SF7 37 313 9.5E-81 T 22-04-2016 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 Gene3D G3DSA:1.10.760.10 37 192 1.2E-40 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 PANTHER PTHR30600 331 366 9.5E-81 T 22-04-2016 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 PANTHER PTHR30600 37 313 9.5E-81 T 22-04-2016 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 Pfam PF03150 Di-haem cytochrome c peroxidase 46 201 1.8E-38 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 TIGRFAM TIGR04039 MXAN_0977_Heme2: di-heme enzyme, MXAN_0977 family 37 370 7.3E-143 T 22-04-2016 IPR023929 Di-heme enzyme, MXAN0977 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 SUPERFAMILY SSF46626 25 189 2.41E-40 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 Gene3D G3DSA:1.10.760.10 193 364 1.4E-42 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 PIRSF PIRSF000294 4 371 1.6E-67 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 SUPERFAMILY SSF46626 276 357 2.36E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16985 82c77b51d21ac4f6035213c6bdfab4f8 372 SUPERFAMILY SSF46626 178 242 2.36E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PANTHER PTHR10422 7 524 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 SUPERFAMILY SSF81442 17 524 7.98E-224 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PANTHER PTHR10422:SF18 7 524 0.0 T 22-04-2016 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 253 307 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 21 525 1.3E-220 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 171 189 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 356 374 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 69 92 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 219 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 251 272 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 312 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 321 342 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 121 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 20 45 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 139 151 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 434 455 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 PRINTS PR01165 Cytochrome c oxidase subunit I signature 384 403 2.3E-150 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 29 476 5.5E-159 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS14180 16b0f048012b131c566b97f759d5f11c 531 Gene3D G3DSA:1.20.210.10 33 497 3.1E-243 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS10775 125c4ce6445e9bbab4e5592c9ef1828a 272 Pfam PF02535 ZIP Zinc transporter 120 268 8.0E-15 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_RS10775 125c4ce6445e9bbab4e5592c9ef1828a 272 PANTHER PTHR11040 1 97 8.7E-42 T 22-04-2016 TMO_RS10775 125c4ce6445e9bbab4e5592c9ef1828a 272 PANTHER PTHR11040 117 272 8.7E-42 T 22-04-2016 TMO_RS10775 125c4ce6445e9bbab4e5592c9ef1828a 272 PANTHER PTHR11040:SF33 117 272 8.7E-42 T 22-04-2016 TMO_RS10775 125c4ce6445e9bbab4e5592c9ef1828a 272 PANTHER PTHR11040:SF33 1 97 8.7E-42 T 22-04-2016 TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 SMART SM00382 33 201 3.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 PANTHER PTHR22908:SF67 3 304 7.1E-96 T 22-04-2016 TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 PANTHER PTHR22908 3 304 7.1E-96 T 22-04-2016 TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 SUPERFAMILY SSF52540 31 285 6.06E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 Pfam PF07728 AAA domain (dynein-related subfamily) 36 195 5.1E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TMO_RS05910 b2d29e02c55651b6f8084c7ccb8653a3 311 Gene3D G3DSA:3.40.50.300 29 225 2.3E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17875 bb20596a54e0d0dffc4c20f68cd48b41 167 Gene3D G3DSA:1.20.1260.10 16 153 1.2E-40 T 22-04-2016 IPR012347 Ferritin-related TMO_RS17875 bb20596a54e0d0dffc4c20f68cd48b41 167 Pfam PF02915 Rubrerythrin 24 146 1.1E-21 T 22-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 TMO_RS17875 bb20596a54e0d0dffc4c20f68cd48b41 167 PANTHER PTHR33746 11 163 1.3E-41 T 22-04-2016 TMO_RS17875 bb20596a54e0d0dffc4c20f68cd48b41 167 SUPERFAMILY SSF47240 17 153 2.23E-31 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS17875 bb20596a54e0d0dffc4c20f68cd48b41 167 PANTHER PTHR33746:SF3 11 163 1.3E-41 T 22-04-2016 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 SUPERFAMILY SSF53383 1 449 2.01E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 Gene3D G3DSA:3.40.640.10 62 296 2.6E-24 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 PANTHER PTHR11773:SF2 1 451 6.9E-180 T 22-04-2016 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 451 43.235 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 Gene3D G3DSA:3.90.1150.10 323 449 3.6E-5 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 Pfam PF02347 Glycine cleavage system P-protein 1 447 4.6E-114 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 PANTHER PTHR11773 1 451 6.9E-180 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 TMO_RS14055 1eb45944344930c161c905974a8e1ba7 454 PIRSF PIRSF006815 1 452 5.7E-151 T 22-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF54713 149 305 2.22E-45 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 304 1.6E-96 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Hamap MF_00050 Elongation factor Ts [tsf]. 1 305 78.017 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF54713 56 146 7.41E-20 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 PANTHER PTHR11741 1 307 8.1E-136 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:3.30.479.20 57 149 4.4E-15 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:1.10.8.10 2 55 8.8E-29 T 22-04-2016 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:1.10.286.20 204 245 2.9E-20 T 22-04-2016 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:3.30.479.20 246 287 3.1E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Gene3D G3DSA:3.30.479.20 150 197 3.1E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 Pfam PF00889 Elongation factor TS 71 288 6.1E-69 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 SUPERFAMILY SSF46934 4 55 1.07E-19 T 22-04-2016 IPR009060 UBA-like GO:0005515 TMO_RS08950 92d8eec1f31fa3c9ea22dcb0742a2b8f 307 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 SUPERFAMILY SSF53187 173 488 2.57E-117 T 22-04-2016 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 17 140 1.8E-24 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 SUPERFAMILY SSF52949 8 175 3.94E-27 T 22-04-2016 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 177 482 2.2E-117 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 491 35.603 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 Gene3D G3DSA:3.40.630.10 165 489 1.0E-129 T 22-04-2016 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 311 332 9.9E-52 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 362 377 9.9E-52 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 274 295 9.9E-52 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 252 269 9.9E-52 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PRINTS PR00481 Cytosol aminopeptidase signature 333 353 9.9E-52 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 337 344 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PANTHER PTHR11963 22 489 2.1E-177 T 22-04-2016 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 Gene3D G3DSA:3.40.220.10 2 145 6.1E-31 T 22-04-2016 TMO_RS09285 bcbff7c9045f6dc69e32c2635c8903b1 494 PANTHER PTHR11963:SF13 22 489 2.1E-177 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF54373 207 303 1.02E-36 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF54862 443 542 2.65E-29 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 175 190 3.6E-7 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.6E-7 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 67 1.1E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 PANTHER PTHR10617 1 466 8.4E-287 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 Gene3D G3DSA:3.30.70.20 486 526 0.001 T 22-04-2016 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 Gene3D G3DSA:3.50.50.60 6 278 2.0E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 PANTHER PTHR10617:SF107 1 466 8.4E-287 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 439 539 1.1E-50 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF51905 2 206 7.08E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13470 2e9ab75fd0cf80072376f818b642315d 542 SUPERFAMILY SSF51905 303 441 7.08E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 PANTHER PTHR31637 1 518 5.4E-240 T 22-04-2016 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 PANTHER PTHR31637:SF0 1 518 5.4E-240 T 22-04-2016 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 SUPERFAMILY SSF64158 83 302 1.7E-74 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 88 298 7.0E-69 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 PIRSF PIRSF001492 4 517 4.2E-196 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 11 514 4.3E-199 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Pfam PF01676 Metalloenzyme superfamily 11 503 7.6E-77 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Gene3D G3DSA:3.40.1450.10 84 312 1.8E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 SUPERFAMILY SSF53649 10 83 7.2E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 SUPERFAMILY SSF53649 312 514 7.2E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 10 515 47.287 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Gene3D G3DSA:3.40.720.10 316 514 3.2E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 TMO_RS14990 c08fd9863dea03c3349a6887cb045833 526 Gene3D G3DSA:3.40.720.10 10 83 3.2E-87 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 TMO_RS00085 025760c398384901df3cdce4537461b2 391 Gene3D G3DSA:1.10.3720.10 13 39 4.4E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00085 025760c398384901df3cdce4537461b2 391 Gene3D G3DSA:1.10.3720.10 159 383 4.4E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00085 025760c398384901df3cdce4537461b2 391 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 192 382 9.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00085 025760c398384901df3cdce4537461b2 391 SUPERFAMILY SSF161098 172 382 2.75E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00085 025760c398384901df3cdce4537461b2 391 PANTHER PTHR30193:SF8 12 51 1.1E-96 T 22-04-2016 TMO_RS00085 025760c398384901df3cdce4537461b2 391 PANTHER PTHR30193:SF8 151 382 1.1E-96 T 22-04-2016 TMO_RS00085 025760c398384901df3cdce4537461b2 391 PANTHER PTHR30193 12 51 1.1E-96 T 22-04-2016 TMO_RS00085 025760c398384901df3cdce4537461b2 391 PANTHER PTHR30193 151 382 1.1E-96 T 22-04-2016 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 PANTHER PTHR21235 1 254 8.9E-120 T 22-04-2016 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 Pfam PF00977 Histidine biosynthesis protein 5 234 1.7E-89 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 PANTHER PTHR21235:SF2 1 254 8.9E-120 T 22-04-2016 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 SUPERFAMILY SSF51366 1 252 4.63E-85 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 Gene3D G3DSA:3.20.20.70 5 252 2.3E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 47.866 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 TMO_RS16940 d771c062af9d68cdc43b8e262a138204 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.3E-105 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 SMART SM00967 37 113 3.0E-5 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 Pfam PF00588 SpoU rRNA Methylase family 124 263 3.6E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 PANTHER PTHR12029:SF61 10 270 2.3E-63 T 22-04-2016 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 37 112 5.5E-5 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 SUPERFAMILY SSF75217 120 270 1.05E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 PANTHER PTHR12029 10 270 2.3E-63 T 22-04-2016 TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 SUPERFAMILY SSF55315 10 111 4.94E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 Gene3D G3DSA:3.30.1330.30 9 109 2.4E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS05585 0b8f687f4fd20c8ba6281b821ae142c5 275 Gene3D G3DSA:3.40.1280.10 122 269 8.5E-44 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS12955 072118a112c8853160e0795a35672678 303 PANTHER PTHR10277:SF40 3 297 1.8E-198 T 22-04-2016 TMO_RS12955 072118a112c8853160e0795a35672678 303 Pfam PF00682 HMGL-like 7 276 7.7E-60 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS12955 072118a112c8853160e0795a35672678 303 SUPERFAMILY SSF51569 2 295 1.61E-77 T 22-04-2016 TMO_RS12955 072118a112c8853160e0795a35672678 303 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 TMO_RS12955 072118a112c8853160e0795a35672678 303 Gene3D G3DSA:3.20.20.70 5 288 6.6E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS12955 072118a112c8853160e0795a35672678 303 PANTHER PTHR10277 3 297 1.8E-198 T 22-04-2016 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 Pfam PF03796 DnaB-like helicase C terminal domain 216 510 1.6E-102 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 SUPERFAMILY SSF52540 477 502 9.06E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 SUPERFAMILY SSF52540 216 443 9.06E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 PANTHER PTHR30153 276 447 8.3E-163 T 22-04-2016 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 PANTHER PTHR30153 22 260 8.3E-163 T 22-04-2016 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 PANTHER PTHR30153 472 520 8.3E-163 T 22-04-2016 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 Pfam PF00772 DnaB-like helicase N terminal domain 38 139 1.8E-26 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 Gene3D G3DSA:3.40.50.300 201 512 1.2E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 38 512 1.5E-157 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 SUPERFAMILY SSF48024 36 147 3.01E-31 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 TMO_RS09415 694d7fd85e3c37584340e3a52ca37bde 527 Gene3D G3DSA:1.10.860.10 39 139 1.7E-26 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF00474 Sodium:solute symporter family 48 139 1.6E-6 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PANTHER PTHR24423 649 892 2.2E-61 T 22-04-2016 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PANTHER PTHR24423 543 580 2.2E-61 T 22-04-2016 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PANTHER PTHR24423 27 36 2.2E-61 T 22-04-2016 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 876 889 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 849 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 853 871 6.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 SUPERFAMILY SSF55874 727 893 2.62E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 SMART SM00388 670 737 8.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 Gene3D G3DSA:3.30.565.10 746 892 8.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 SUPERFAMILY SSF47384 655 736 2.55E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 SMART SM00387 783 892 2.7E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 433 453 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 783 891 2.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 736 2.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04690 31f16ac09e43ae4f4fde4f9a238b752f 906 Gene3D G3DSA:1.10.287.130 662 731 3.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 SUPERFAMILY SSF58104 193 440 2.09E-56 T 22-04-2016 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 314 343 8.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 312 8.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 391 8.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 8.0E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 SMART SM00283 187 441 3.3E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 SUPERFAMILY SSF46458 12 155 6.47E-37 T 22-04-2016 IPR009050 Globin-like TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 Gene3D G3DSA:1.10.490.10 12 156 3.1E-46 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PANTHER PTHR32089:SF40 165 444 7.0E-92 T 22-04-2016 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 Gene3D G3DSA:1.10.287.950 205 409 1.8E-45 T 22-04-2016 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 PANTHER PTHR32089 165 444 7.0E-92 T 22-04-2016 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 Pfam PF11563 Protoglobin 12 159 1.0E-40 T 22-04-2016 TMO_RS06110 fbc6b82d1c05adfc60ea98cc40deb649 449 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 260 440 1.1E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS09005 030e7c2af900570f537f7b324b880047 167 PANTHER PTHR33303 5 166 3.1E-53 T 22-04-2016 TMO_RS09005 030e7c2af900570f537f7b324b880047 167 Gene3D G3DSA:3.40.50.720 14 148 8.5E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09005 030e7c2af900570f537f7b324b880047 167 SUPERFAMILY SSF51735 14 144 3.98E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09005 030e7c2af900570f537f7b324b880047 167 Pfam PF13380 CoA binding domain 25 141 8.2E-40 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS09005 030e7c2af900570f537f7b324b880047 167 SMART SM00881 21 115 3.2E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Pfam PF00501 AMP-binding enzyme 17 441 6.3E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:3.40.50.980 47 190 1.3E-28 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:2.30.38.10 360 435 1.2E-19 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 1.5E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 PANTHER PTHR24096:SF53 1 533 3.5E-255 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 SUPERFAMILY SSF56801 11 538 6.41E-134 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:3.40.50.980 191 344 1.6E-31 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 Gene3D G3DSA:3.30.300.30 436 534 1.3E-24 T 22-04-2016 TMO_RS09615 356e0cffcf6ec4518daa797ad545502f 544 PANTHER PTHR24096 1 533 3.5E-255 T 22-04-2016 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 Gene3D G3DSA:2.130.10.10 30 245 3.6E-31 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 Gene3D G3DSA:2.130.10.10 246 351 6.0E-12 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 PANTHER PTHR22847 33 297 2.5E-19 T 22-04-2016 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 Pfam PF00400 WD domain, G-beta repeat 233 260 0.064 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 182 220 22.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 222 260 0.36 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 312 349 11.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 16 55 33.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 140 179 0.43 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SMART SM00320 59 98 190.0 T 22-04-2016 IPR001680 WD40 repeat GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SUPERFAMILY SSF50978 282 350 4.58E-5 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 TMO_RS06665 b9358035517436847de48933f79b9fdc 356 SUPERFAMILY SSF50978 31 304 4.94E-35 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 SUPERFAMILY SSF52540 396 707 3.15E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 SUPERFAMILY SSF46785 742 808 1.01E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 PANTHER PTHR22683 146 809 3.5E-222 T 22-04-2016 TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 Gene3D G3DSA:3.40.50.300 394 701 1.2E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 Pfam PF09397 Ftsk gamma domain 744 804 3.3E-23 T 22-04-2016 IPR018541 FtsK gamma domain TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 SMART SM00843 742 807 7.5E-31 T 22-04-2016 IPR018541 FtsK gamma domain TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 Pfam PF01580 FtsK/SpoIIIE family 417 636 4.8E-66 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TMO_RS02070 30400006fe77e1a222695e40d10b645c 817 PANTHER PTHR22683:SF41 146 809 3.5E-222 T 22-04-2016 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 17 242 42.301 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 Gene3D G3DSA:3.40.50.880 17 241 2.7E-37 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 PIRSF PIRSF001586 15 245 3.0E-83 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 SUPERFAMILY SSF52317 15 241 2.64E-75 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 PANTHER PTHR10099 20 241 1.7E-107 T 22-04-2016 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 18 241 9.0E-93 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 19 225 2.5E-40 T 22-04-2016 TMO_RS11380 c4afc79c7b96704594ad8d0d256ad3b0 245 SMART SM01211 16 244 9.7E-127 T 22-04-2016 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 PANTHER PTHR11808:SF12 270 431 2.2E-220 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 PANTHER PTHR11808:SF12 1 237 2.2E-220 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 Gene3D G3DSA:3.90.1150.10 293 429 4.3E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 427 8.8E-185 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 SUPERFAMILY SSF53383 6 427 1.14E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 PANTHER PTHR11808 270 431 2.2E-220 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 PANTHER PTHR11808 1 237 2.2E-220 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 PIRSF PIRSF001434 1 430 4.9E-122 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 Gene3D G3DSA:3.40.640.10 6 291 1.2E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS05120 19f32d206f9344caf4ba0eed6cede957 432 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 426 5.8E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14325 3fa605cd91946453299bda50b1cba497 261 Gene3D G3DSA:1.10.3720.10 9 254 5.5E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14325 3fa605cd91946453299bda50b1cba497 261 SUPERFAMILY SSF161098 8 254 9.35E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14325 3fa605cd91946453299bda50b1cba497 261 PANTHER PTHR30193 13 256 9.6E-60 T 22-04-2016 TMO_RS14325 3fa605cd91946453299bda50b1cba497 261 PANTHER PTHR30193:SF20 13 256 9.6E-60 T 22-04-2016 TMO_RS14325 3fa605cd91946453299bda50b1cba497 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 5.8E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Pfam PF00501 AMP-binding enzyme 17 404 1.3E-98 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Pfam PF13193 AMP-binding enzyme C-terminal domain 413 489 1.2E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:3.40.50.980 5 166 2.7E-36 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:3.30.300.30 399 497 2.2E-27 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 PANTHER PTHR24096:SF206 4 497 1.1E-203 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 ProSitePatterns PS00455 Putative AMP-binding domain signature. 161 172 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:2.30.38.10 325 398 1.7E-28 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 SUPERFAMILY SSF56801 4 501 1.19E-144 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 PANTHER PTHR24096 4 497 1.1E-203 T 22-04-2016 TMO_RS04735 ec792ad96239b12f27f6205e858288f1 505 Gene3D G3DSA:3.40.50.980 167 324 1.3E-39 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:2.30.38.10 366 443 4.1E-25 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 PANTHER PTHR24096 11 546 1.8E-252 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Pfam PF00501 AMP-binding enzyme 36 449 2.2E-99 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:3.40.50.980 53 197 1.1E-32 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 459 533 5.0E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 SUPERFAMILY SSF56801 16 545 5.49E-144 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:3.30.300.30 444 542 8.5E-27 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 PANTHER PTHR24096:SF53 11 546 1.8E-252 T 22-04-2016 TMO_RS03250 2063defd4ea704f989d91c367d8a1379 551 Gene3D G3DSA:3.40.50.980 198 345 3.4E-33 T 22-04-2016 TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 SUPERFAMILY SSF101874 23 197 3.53E-46 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 PANTHER PTHR34406:SF1 1 197 1.2E-47 T 22-04-2016 TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 Pfam PF04264 YceI-like domain 24 194 3.3E-37 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 PANTHER PTHR34406 1 197 1.2E-47 T 22-04-2016 TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 SMART SM00867 23 195 2.3E-54 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_RS17295 be3bb8bbb6e3bd32a0c359ed04b3410c 197 Gene3D G3DSA:2.40.128.110 23 197 2.9E-49 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 584 647 2.6E-23 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 15 649 1.4E-226 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PANTHER PTHR10169:SF45 15 651 3.8E-192 T 22-04-2016 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PANTHER PTHR10169 15 651 3.8E-192 T 22-04-2016 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 14 655 41.226 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF54211 241 413 1.44E-37 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 SMART SM00387 42 188 4.9E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 SMART SM00433 46 651 2.8E-267 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF01751 Toprim domain 441 547 3.2E-16 T 22-04-2016 IPR006171 Toprim domain TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 187 9.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 508 524 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 46 61 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 125 139 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 546 558 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 526 543 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 81 94 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 442 456 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 288 301 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR00418 DNA topoisomerase II family signature 588 604 1.6E-61 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.30.230.10 240 412 2.1E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 397 417 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 492 501 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 383 397 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 335 351 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 17 27 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 PRINTS PR01159 DNA gyrase subunit B signature 609 621 1.6E-13 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.40.50.670 426 638 7.8E-77 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF56719 416 650 1.31E-76 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Pfam PF00204 DNA gyrase B 241 412 7.9E-40 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 ProSitePatterns PS00177 DNA topoisomerase II signature. 444 452 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 Gene3D G3DSA:3.30.565.10 17 217 2.0E-75 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10060 29e04692eafbe758db5089ad7f673a1e 659 SUPERFAMILY SSF55874 17 218 1.83E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PANTHER PTHR20854 7 271 5.9E-87 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 213 237 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR00377 Inositol monophosphatase superfamily signature 182 203 7.7E-54 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 SUPERFAMILY SSF56655 6 263 1.31E-80 T 22-04-2016 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 161 187 6.3E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 203 215 6.3E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 6.3E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PRINTS PR01959 SuhB family inositol monophosphatase signature 109 128 6.3E-25 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Gene3D G3DSA:3.40.190.80 156 266 2.6E-37 T 22-04-2016 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Gene3D G3DSA:3.30.540.10 6 155 7.6E-47 T 22-04-2016 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 PANTHER PTHR20854:SF4 7 271 5.9E-87 T 22-04-2016 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 Pfam PF00459 Inositol monophosphatase family 5 259 4.1E-59 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS04435 70baf1ee30a2ce66cfaf1d9a55f2cb56 280 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 216 230 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 2.0E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 2.0E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 2.0E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 2.0E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 2.0E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 Pfam PF06723 MreB/Mbl protein 11 339 2.0E-151 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.30.420.40 266 320 1.3E-31 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.30.420.40 161 187 1.3E-31 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PANTHER PTHR19375:SF117 10 329 3.1E-167 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 SUPERFAMILY SSF53067 150 334 7.6E-47 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 SUPERFAMILY SSF53067 10 149 1.5E-39 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 339 4.0E-158 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.30.420.40 10 160 6.3E-47 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 PANTHER PTHR19375 10 329 3.1E-167 T 22-04-2016 TMO_RS03845 d557330feaa9df377124ce37b6e9bae9 346 Gene3D G3DSA:3.90.640.10 188 262 6.6E-29 T 22-04-2016 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 PANTHER PTHR21712:SF4 16 340 2.1E-85 T 22-04-2016 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 PANTHER PTHR21712 16 340 2.1E-85 T 22-04-2016 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 Gene3D G3DSA:1.10.1610.10 17 85 8.5E-30 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 26 340 4.9E-115 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 25 342 34.256 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 Gene3D G3DSA:3.40.50.10210 86 323 1.0E-84 T 22-04-2016 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 Pfam PF02277 Phosphoribosyltransferase 25 340 7.2E-114 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 TMO_RS15890 3d5868add8e9cc75ace035a05aa28305 345 SUPERFAMILY SSF52733 18 340 5.62E-107 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 SUPERFAMILY SSF89796 6 366 4.06E-104 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 Gene3D G3DSA:3.40.50.10540 6 216 8.9E-81 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 Gene3D G3DSA:3.40.50.10540 305 366 8.9E-81 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 Gene3D G3DSA:3.30.1540.10 221 304 6.8E-24 T 22-04-2016 TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 PANTHER PTHR24023:SF593 80 242 9.0E-18 T 22-04-2016 TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 PANTHER PTHR24023 80 242 9.0E-18 T 22-04-2016 TMO_RS02675 470c2e6ae1e0a907c6b28e9a961f3d51 374 Pfam PF02515 CoA-transferase family III 8 366 4.4E-101 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 81 2.4E-28 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 PANTHER PTHR13718 16 171 5.6E-68 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 Gene3D G3DSA:3.30.160.20 16 78 4.5E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 SUPERFAMILY SSF54211 86 165 3.03E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 35.972 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 170 6.7E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 Pfam PF03719 Ribosomal protein S5, C-terminal domain 94 164 1.4E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 SUPERFAMILY SSF54768 15 82 5.86E-23 T 22-04-2016 TMO_RS13170 c9626bcdddef498fc525f2e496b79570 187 Gene3D G3DSA:3.30.230.10 82 166 1.7E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 SMART SM00420 6 58 1.1E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 Gene3D G3DSA:1.10.10.10 1 47 1.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 PANTHER PTHR30363:SF1 1 254 3.5E-81 T 22-04-2016 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 4.3E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 PANTHER PTHR30363 1 254 3.5E-81 T 22-04-2016 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 Gene3D G3DSA:3.40.50.1360 74 209 5.6E-14 T 22-04-2016 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 SUPERFAMILY SSF46785 3 65 2.28E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 SMART SM01134 70 230 2.2E-54 T 22-04-2016 TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 Pfam PF00455 DeoR C terminal sensor domain 72 228 4.2E-40 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain TMO_RS06650 6fc1df1b9771b87b2a81a032b14c91fb 255 SUPERFAMILY SSF100950 71 230 9.63E-27 T 22-04-2016 TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 Pfam PF00886 Ribosomal protein S16 9 70 1.5E-26 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 PANTHER PTHR12919 2 117 2.6E-41 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 SUPERFAMILY SSF54565 3 91 3.4E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 83 5.1E-33 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 Gene3D G3DSA:3.30.1320.10 3 85 7.8E-34 T 22-04-2016 IPR023803 Ribosomal protein S16 domain TMO_RS16380 887423c5e51aab8fcd9996ae4021b03e 121 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.371 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 11 334 5.1E-117 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 SUPERFAMILY SSF53659 10 337 1.67E-103 T 22-04-2016 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 8 334 33.737 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 Gene3D G3DSA:3.40.718.10 7 337 1.3E-120 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 PANTHER PTHR30004:SF6 6 341 4.5E-124 T 22-04-2016 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 51 330 1.3E-96 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 TMO_RS09310 400a6575ffd4da527edac26295245f22 344 PANTHER PTHR30004 6 341 4.5E-124 T 22-04-2016 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 Gene3D G3DSA:3.40.50.720 4 145 1.5E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 7 271 1.8E-41 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 SUPERFAMILY SSF55347 132 242 2.62E-21 T 22-04-2016 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 137 265 2.0E-14 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 SUPERFAMILY SSF51735 6 157 3.25E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 PIRSF PIRSF000161 5 277 2.0E-41 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 PANTHER PTHR20836 6 282 2.2E-46 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 8 131 1.7E-22 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS15250 197e63c2f9d82556b7e58949c6e9eea9 286 Gene3D G3DSA:3.30.360.10 146 242 7.3E-14 T 22-04-2016 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 SUPERFAMILY SSF51338 1 55 1.03E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 SUPERFAMILY SSF51338 347 379 1.03E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:2.30.40.10 4 96 1.4E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 Gene3D G3DSA:2.30.40.10 291 358 2.0E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 Pfam PF07969 Amidohydrolase family 81 380 1.2E-10 T 22-04-2016 IPR013108 Amidohydrolase 3 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 PANTHER PTHR11271:SF43 6 380 1.6E-98 T 22-04-2016 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 PANTHER PTHR11271 6 380 1.6E-98 T 22-04-2016 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 PIRSF PIRSF038971 3 381 5.1E-140 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 SUPERFAMILY SSF51556 55 347 2.85E-17 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS10545 ada78cd0dfb90df41d485e54f8f9e650 381 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 6 380 3.7E-143 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 TMO_RS14420 adbeae9a2a433ce7b2624b50b82dc297 557 SUPERFAMILY SSF52317 256 333 9.16E-8 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS14420 adbeae9a2a433ce7b2624b50b82dc297 557 Gene3D G3DSA:3.40.50.880 250 324 2.8E-4 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS04035 5680756fe9a44724d9cf6f0e48c9c38d 114 Gene3D G3DSA:3.40.1440.10 20 110 3.5E-13 T 22-04-2016 IPR027299 GIY-YIG domain TMO_RS11695 722eed471545d8b1f8d65fbd813146bb 461 Pfam PF13264 Domain of unknown function (DUF4055) 259 397 9.1E-40 T 22-04-2016 IPR025129 Domain of unknown function DUF4055 TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 440 9.7E-7 T 22-04-2016 IPR000160 GGDEF domain TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 Pfam PF00072 Response regulator receiver domain 7 106 3.5E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF52172 174 287 1.17E-11 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 SMART SM00448 5 118 1.1E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 Gene3D G3DSA:3.40.50.2300 169 282 9.4E-9 T 22-04-2016 TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF55073 300 441 3.3E-8 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 Gene3D G3DSA:3.30.70.270 296 440 4.5E-10 T 22-04-2016 TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 SUPERFAMILY SSF52172 6 135 1.05E-19 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS08190 876faa76342c455d0f063b3be36fa93b 442 Gene3D G3DSA:3.40.50.2300 5 130 1.7E-17 T 22-04-2016 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 Gene3D G3DSA:3.40.50.300 3 225 1.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 SMART SM00382 28 214 3.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 SUPERFAMILY SSF52540 259 491 3.04E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 Pfam PF00005 ABC transporter 277 433 1.0E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 Pfam PF00005 ABC transporter 19 166 6.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 PANTHER PTHR24220:SF239 5 386 1.5E-147 T 22-04-2016 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 PANTHER PTHR24220 5 386 1.5E-147 T 22-04-2016 TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 SUPERFAMILY SSF52540 3 224 1.84E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04355 b6569c3faa71c709fba513fff951bae3 518 Gene3D G3DSA:3.40.50.300 255 491 4.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00412 Epoxide hydrolase signature 29 47 9.6E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00412 Epoxide hydrolase signature 49 64 9.6E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 219 233 3.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.3E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 Pfam PF00561 alpha/beta hydrolase fold 23 258 2.8E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PANTHER PTHR10992:SF859 2 276 2.5E-109 T 22-04-2016 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 Gene3D G3DSA:3.40.50.1820 4 275 2.5E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 PANTHER PTHR10992 2 276 2.5E-109 T 22-04-2016 TMO_RS16890 8777b0dda8c0e93de97c17558047ae8a 276 SUPERFAMILY SSF53474 5 275 3.22E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF109604 347 480 1.13E-6 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 PANTHER PTHR30005 2 454 1.1E-64 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 Gene3D G3DSA:3.30.420.150 151 317 4.1E-27 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 Gene3D G3DSA:3.30.420.40 25 146 1.9E-35 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF53067 150 319 2.59E-31 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 SUPERFAMILY SSF53067 26 147 1.3E-31 T 22-04-2016 TMO_RS16705 853a80fe77a074bba6fef537cc35e89d 512 Pfam PF02541 Ppx/GppA phosphatase family 47 318 1.6E-46 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 TMO_RS14190 cd907d9b2d0ed902c73e9c02ef1b5b50 481 PIRSF PIRSF004919 19 478 2.7E-132 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS14190 cd907d9b2d0ed902c73e9c02ef1b5b50 481 Pfam PF01523 Putative modulator of DNA gyrase 39 329 1.9E-56 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS14190 cd907d9b2d0ed902c73e9c02ef1b5b50 481 PANTHER PTHR30624:SF4 12 479 1.2E-206 T 22-04-2016 TMO_RS14190 cd907d9b2d0ed902c73e9c02ef1b5b50 481 PANTHER PTHR30624 12 479 1.2E-206 T 22-04-2016 TMO_RS14190 cd907d9b2d0ed902c73e9c02ef1b5b50 481 SUPERFAMILY SSF111283 30 477 8.37E-128 T 22-04-2016 TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 Gene3D G3DSA:2.120.10.30 7 305 9.0E-64 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 PANTHER PTHR10907:SF47 102 305 5.7E-45 T 22-04-2016 TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 PANTHER PTHR10907:SF47 9 79 5.7E-45 T 22-04-2016 TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 PANTHER PTHR10907 102 305 5.7E-45 T 22-04-2016 TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 PANTHER PTHR10907 9 79 5.7E-45 T 22-04-2016 TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 287 1.9E-50 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_RS12425 8a9342cc3d5b16893d61046498490455 308 SUPERFAMILY SSF63829 5 303 2.62E-58 T 22-04-2016 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 SUPERFAMILY SSF53901 263 381 3.42E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Pfam PF00108 Thiolase, N-terminal domain 7 187 6.4E-16 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 PANTHER PTHR18919:SF83 1 392 8.8E-167 T 22-04-2016 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Pfam PF02803 Thiolase, C-terminal domain 271 366 1.2E-9 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 SUPERFAMILY SSF53901 5 235 2.33E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Gene3D G3DSA:3.40.47.10 149 187 8.6E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Gene3D G3DSA:3.40.47.10 252 388 8.6E-24 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 PIRSF PIRSF000429 1 391 4.6E-63 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 78 96 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 PANTHER PTHR18919 1 392 8.8E-167 T 22-04-2016 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Gene3D G3DSA:3.40.47.10 23 117 5.7E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS04900 e6db6876141f82c2b728c41afc06cc8a 393 Gene3D G3DSA:3.40.47.10 206 227 5.7E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 Gene3D G3DSA:3.40.50.300 126 399 1.3E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 90 1.1E-7 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 358 1.6E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 SMART SM00382 160 343 4.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 PANTHER PTHR15184 1 438 8.6E-202 T 22-04-2016 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 438 4.5E-162 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 TIGRFAM TIGR03498 FliI_clade3: flagellar protein export ATPase FliI 22 438 5.8E-192 T 22-04-2016 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 GO:0009288|GO:0016887|GO:0030257|GO:0044781 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 SUPERFAMILY SSF52540 95 363 6.84E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06185 d3a020019719f134e2fce41789175aa3 445 PANTHER PTHR15184:SF9 1 438 8.6E-202 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Gene3D G3DSA:3.40.50.2300 3 131 5.5E-35 T 22-04-2016 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Gene3D G3DSA:1.10.10.10 132 232 1.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 2.2E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 PANTHER PTHR26402 5 232 8.0E-76 T 22-04-2016 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SUPERFAMILY SSF52172 3 141 4.84E-37 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SMART SM00862 156 231 2.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 Pfam PF00072 Response regulator receiver domain 7 121 8.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SMART SM00448 5 121 1.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 SUPERFAMILY SSF46894 138 231 2.55E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS17330 c04d6abc61f33ee2b6b4e1fbe6f21d17 233 PANTHER PTHR26402:SF50 5 232 8.0E-76 T 22-04-2016 TMO_RS02545 51250405d773dbc748946f1f5b91f6b0 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 34 341 3.3E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS02545 51250405d773dbc748946f1f5b91f6b0 370 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 23 351 7.5E-112 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC TMO_RS02545 51250405d773dbc748946f1f5b91f6b0 370 PANTHER PTHR30482 9 75 9.7E-58 T 22-04-2016 TMO_RS02545 51250405d773dbc748946f1f5b91f6b0 370 PANTHER PTHR30482 114 359 9.7E-58 T 22-04-2016 TMO_RS01255 9e0199799501e5053c0736e93b63f0bd 431 PANTHER PTHR33362:SF6 1 424 1.3E-221 T 22-04-2016 TMO_RS01255 9e0199799501e5053c0736e93b63f0bd 431 PANTHER PTHR33362 1 424 1.3E-221 T 22-04-2016 TMO_RS01255 9e0199799501e5053c0736e93b63f0bd 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.1E-144 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS01255 9e0199799501e5053c0736e93b63f0bd 431 PIRSF PIRSF006066 1 427 1.0E-155 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS01255 9e0199799501e5053c0736e93b63f0bd 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 416 3.1E-122 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 33.628 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 6.6E-36 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 1.2E-85 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 SUPERFAMILY SSF55347 126 235 3.27E-35 T 22-04-2016 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 Gene3D G3DSA:3.40.50.720 1 162 3.0E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 PIRSF PIRSF000161 1 266 1.3E-84 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 PANTHER PTHR20836:SF0 1 265 2.9E-84 T 22-04-2016 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 PANTHER PTHR20836 1 265 2.9E-84 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 1.9E-42 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 SUPERFAMILY SSF51735 235 265 3.12E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17505 c47879b247d27726b93e7141c50c3776 266 SUPERFAMILY SSF51735 2 125 3.12E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 Pfam PF00572 Ribosomal protein L13 14 139 3.4E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 Gene3D G3DSA:3.90.1180.10 3 142 8.0E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 PIRSF PIRSF002181 1 151 6.8E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 29.04 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 PANTHER PTHR11545 1 142 2.0E-68 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 9.6E-59 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 TMO_RS08995 d3cda7ec56357d5d1bc2d9140c062321 152 SUPERFAMILY SSF52161 1 140 3.27E-57 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 Pfam PF00571 CBS domain 274 327 3.0E-8 T 22-04-2016 IPR000644 CBS domain TMO_RS00935 a15a9135481d68db085474b5266d8022 330 Pfam PF00571 CBS domain 210 264 9.2E-6 T 22-04-2016 IPR000644 CBS domain TMO_RS00935 a15a9135481d68db085474b5266d8022 330 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 320 2.8E-92 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 Gene3D G3DSA:3.10.580.10 204 327 3.2E-36 T 22-04-2016 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 PANTHER PTHR38418:SF1 41 225 2.3E-37 T 22-04-2016 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 PIRSF PIRSF004692 3 330 7.9E-127 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 Pfam PF01380 SIS domain 51 180 6.5E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 SMART SM00116 281 329 0.43 T 22-04-2016 IPR000644 CBS domain TMO_RS00935 a15a9135481d68db085474b5266d8022 330 SMART SM00116 218 266 0.013 T 22-04-2016 IPR000644 CBS domain TMO_RS00935 a15a9135481d68db085474b5266d8022 330 SUPERFAMILY SSF53697 20 330 8.23E-60 T 22-04-2016 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 Gene3D G3DSA:3.40.50.10490 21 203 6.8E-45 T 22-04-2016 TMO_RS00935 a15a9135481d68db085474b5266d8022 330 PANTHER PTHR38418 41 225 2.3E-37 T 22-04-2016 TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 69 244 9.2E-29 T 22-04-2016 TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 Gene3D G3DSA:3.40.50.150 33 245 4.7E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 PANTHER PTHR11579:SF0 33 55 2.0E-34 T 22-04-2016 TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 PANTHER PTHR11579:SF0 73 245 2.0E-34 T 22-04-2016 TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 SUPERFAMILY SSF53335 34 243 4.96E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 PANTHER PTHR11579 33 55 2.0E-34 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS29350 21c121d7c77b1dc0e40ac1ffc2313583 411 PANTHER PTHR11579 73 245 2.0E-34 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS10435 137ad558f2f27d420c8a0ef4117e6b52 476 Pfam PF12801 4Fe-4S binding domain 65 106 9.7E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS10435 137ad558f2f27d420c8a0ef4117e6b52 476 Pfam PF12801 4Fe-4S binding domain 149 184 0.0041 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS10435 137ad558f2f27d420c8a0ef4117e6b52 476 SUPERFAMILY SSF54862 167 238 1.42E-8 T 22-04-2016 TMO_RS10435 137ad558f2f27d420c8a0ef4117e6b52 476 Gene3D G3DSA:3.30.70.20 168 240 1.9E-7 T 22-04-2016 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 PANTHER PTHR11019 207 293 6.4E-19 T 22-04-2016 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 Pfam PF12833 Helix-turn-helix domain 214 292 1.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 PANTHER PTHR11019:SF61 207 293 6.4E-19 T 22-04-2016 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 SUPERFAMILY SSF46689 244 293 4.66E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 Gene3D G3DSA:1.10.10.60 247 290 3.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 Gene3D G3DSA:1.10.10.60 204 246 1.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 SUPERFAMILY SSF46689 207 242 3.46E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09505 a57b79f1e944f029c99219f4261b817a 294 SMART SM00342 208 291 3.2E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS20795 0e57c10dabefeb63e184d525b29640a6 80 Gene3D G3DSA:3.40.50.720 2 79 1.3E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS20795 0e57c10dabefeb63e184d525b29640a6 80 SUPERFAMILY SSF51735 2 79 5.29E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS20795 0e57c10dabefeb63e184d525b29640a6 80 Pfam PF00106 short chain dehydrogenase 2 56 3.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 Gene3D G3DSA:3.40.190.10 198 265 6.8E-12 T 22-04-2016 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 PANTHER PTHR30126 4 285 1.3E-61 T 22-04-2016 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 Gene3D G3DSA:3.40.190.10 86 197 1.5E-18 T 22-04-2016 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 Gene3D G3DSA:1.10.10.10 5 83 9.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 SUPERFAMILY SSF53850 92 301 3.1E-28 T 22-04-2016 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 SUPERFAMILY SSF46785 5 109 1.12E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 PANTHER PTHR30126:SF8 4 285 1.3E-61 T 22-04-2016 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 5.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10465 1438bcc86c32b2ea904ae90b71b0088b 311 Pfam PF03466 LysR substrate binding domain 90 294 4.1E-30 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 1.0E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 SMART SM00345 9 67 2.9E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 Pfam PF07729 FCD domain 77 200 1.1E-21 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 Gene3D G3DSA:1.20.120.530 70 210 2.6E-33 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 SMART SM00895 77 201 9.5E-16 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 SUPERFAMILY SSF48008 73 209 2.88E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 SUPERFAMILY SSF46785 6 92 4.86E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 Gene3D G3DSA:1.10.10.10 5 68 1.5E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 PANTHER PTHR11751 9 93 9.4E-23 T 22-04-2016 TMO_RS00595 349dd51a9bd07a96201ef70204187d9f 211 PANTHER PTHR11751:SF436 9 93 9.4E-23 T 22-04-2016 TMO_RS04125 edeec577847c4528abda961d851ac779 331 PANTHER PTHR11614:SF100 31 326 7.5E-52 T 22-04-2016 TMO_RS04125 edeec577847c4528abda961d851ac779 331 Gene3D G3DSA:3.40.50.1820 37 313 2.2E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04125 edeec577847c4528abda961d851ac779 331 Pfam PF12146 Serine aminopeptidase, S33 53 314 6.5E-47 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 TMO_RS04125 edeec577847c4528abda961d851ac779 331 PANTHER PTHR11614 31 326 7.5E-52 T 22-04-2016 TMO_RS04125 edeec577847c4528abda961d851ac779 331 SUPERFAMILY SSF53474 33 324 1.11E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Gene3D G3DSA:1.20.1560.10 144 446 7.0E-49 T 22-04-2016 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Gene3D G3DSA:3.40.50.300 479 714 3.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Gene3D G3DSA:3.90.70.10 3 124 1.6E-24 T 22-04-2016 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 SUPERFAMILY SSF90123 140 451 7.72E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 ProSitePatterns PS00211 ABC transporters family signature. 616 630 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 SUPERFAMILY SSF52540 469 710 1.58E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Pfam PF00664 ABC transporter transmembrane region 154 420 1.2E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 PANTHER PTHR24221 75 721 1.7E-167 T 22-04-2016 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Pfam PF00005 ABC transporter 496 644 3.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 PANTHER PTHR24221:SF161 75 721 1.7E-167 T 22-04-2016 TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 SMART SM00382 504 688 7.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 TIGRFAM TIGR03796 NHLM_micro_ABC1: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein 1 710 0.0 T 22-04-2016 IPR022514 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein TMO_RS07615 792ff1c7b89fc9389bdd1de1802bf1f7 721 Pfam PF03412 Peptidase C39 family 2 125 1.7E-33 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 408 9.4E-177 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 PANTHER PTHR23151:SF47 3 409 5.7E-221 T 22-04-2016 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 SUPERFAMILY SSF47005 112 153 2.35E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Gene3D G3DSA:3.30.559.10 170 406 2.9E-93 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Pfam PF00364 Biotin-requiring enzyme 4 76 6.9E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 SUPERFAMILY SSF52777 179 408 5.78E-88 T 22-04-2016 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 SUPERFAMILY SSF51230 1 96 3.8E-29 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Pfam PF02817 e3 binding domain 117 150 8.8E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 PANTHER PTHR23151 3 409 5.7E-221 T 22-04-2016 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Gene3D G3DSA:4.10.320.10 115 161 4.6E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 179 406 1.5E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 TMO_RS15145 f16d9d52ed1d4752d1ac20c30a2f12e1 409 Gene3D G3DSA:2.40.50.100 1 96 1.6E-32 T 22-04-2016 TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 Pfam PF13657 HipA N-terminal domain 10 109 1.5E-25 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 10 109 1.4E-27 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 PANTHER PTHR37419:SF3 1 438 3.3E-142 T 22-04-2016 TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 PANTHER PTHR37419 1 438 3.3E-142 T 22-04-2016 TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 Pfam PF07804 HipA-like C-terminal domain 250 397 4.6E-30 T 22-04-2016 IPR012893 HipA-like, C-terminal TMO_RS17535 d82df1501dab064f1a4c5759e7afe2f4 440 Pfam PF07805 HipA-like N-terminal domain 155 240 1.4E-19 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 5.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 Gene3D G3DSA:3.40.50.720 7 257 6.1E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PANTHER PTHR24322 15 141 2.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 PANTHER PTHR24322 166 197 2.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 2.0E-61 T 22-04-2016 TMO_RS04130 c375fb3b52b1d14575de25c7160a3db0 259 SUPERFAMILY SSF51735 12 258 1.04E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03710 95c2db8f70a32e1c98f1fd69a619d353 162 Gene3D G3DSA:3.10.180.10 21 151 3.7E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS03710 95c2db8f70a32e1c98f1fd69a619d353 162 PANTHER PTHR34109 10 153 3.7E-42 T 22-04-2016 TMO_RS03710 95c2db8f70a32e1c98f1fd69a619d353 162 SUPERFAMILY SSF54593 19 142 5.1E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS03710 95c2db8f70a32e1c98f1fd69a619d353 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 138 1.1E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_RS03710 95c2db8f70a32e1c98f1fd69a619d353 162 PANTHER PTHR34109:SF1 10 153 3.7E-42 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 174 741 6.6E-165 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00403 Heavy-metal-associated domain 20 79 7.9E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 674 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 596 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 575 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 288 302 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 452 4.1E-27 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 440 446 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PANTHER PTHR24093:SF50 17 746 7.9E-207 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF81665 186 237 9.02E-15 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF81665 339 430 9.02E-15 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF55008 13 80 5.24E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.30.70.100 19 88 3.6E-20 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 211 718 1.0E-78 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 ProSitePatterns PS01047 Heavy-metal-associated domain. 22 51 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF56784 491 739 2.25E-47 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF56784 438 456 2.25E-47 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 SUPERFAMILY SSF81653 245 338 2.62E-25 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 PANTHER PTHR24093 17 746 7.9E-207 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 156 741 2.3E-154 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 653 3.6E-38 T 22-04-2016 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:2.70.150.10 188 339 4.1E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.40.1110.10 459 566 3.7E-12 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.40.50.1000 410 454 2.0E-46 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Gene3D G3DSA:3.40.50.1000 567 707 2.0E-46 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08830 a6d074789ddbd5f1317de0157e284ee7 754 Pfam PF00122 E1-E2 ATPase 209 428 5.5E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 Pfam PF12833 Helix-turn-helix domain 197 272 7.1E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF46689 228 273 1.47E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 PANTHER PTHR11019:SF75 20 281 3.9E-56 T 22-04-2016 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 Gene3D G3DSA:1.10.10.60 229 272 1.6E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 PANTHER PTHR11019 20 281 3.9E-56 T 22-04-2016 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 Gene3D G3DSA:1.10.10.60 170 228 4.5E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 SMART SM00342 191 273 2.7E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 Gene3D G3DSA:2.60.120.280 33 158 4.0E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF51215 18 158 6.93E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 SUPERFAMILY SSF46689 176 225 1.79E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04135 8aae1b0c2c688f5e86c209fc4014e4b3 287 Pfam PF02311 AraC-like ligand binding domain 30 153 2.8E-19 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 Pfam PF03466 LysR substrate binding domain 90 286 8.3E-35 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.8E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 Gene3D G3DSA:3.40.190.10 183 243 6.5E-4 T 22-04-2016 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 PANTHER PTHR30579 1 301 1.7E-82 T 22-04-2016 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 Gene3D G3DSA:3.40.190.10 92 182 3.2E-21 T 22-04-2016 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 Gene3D G3DSA:1.10.10.10 1 81 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 SUPERFAMILY SSF53850 90 290 4.71E-40 T 22-04-2016 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 PANTHER PTHR30579:SF3 1 301 1.7E-82 T 22-04-2016 TMO_RS06915 0ee971c098215cd3ed3413a62cea4664 303 SUPERFAMILY SSF46785 1 111 9.91E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 SUPERFAMILY SSF46894 172 232 3.4E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 SMART SM00448 8 122 7.6E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 SUPERFAMILY SSF52172 6 125 1.57E-20 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 2.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PANTHER PTHR26402:SF458 174 234 9.6E-36 T 22-04-2016 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PANTHER PTHR26402:SF458 8 157 9.6E-36 T 22-04-2016 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 Gene3D G3DSA:1.10.10.10 173 232 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 Pfam PF00072 Response regulator receiver domain 10 119 1.5E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 Gene3D G3DSA:3.40.50.2300 8 129 3.2E-21 T 22-04-2016 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PANTHER PTHR26402 174 234 9.6E-36 T 22-04-2016 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 PANTHER PTHR26402 8 157 9.6E-36 T 22-04-2016 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 227 1.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS05945 18256f6ad9d06c56c52dd13334945e90 235 SMART SM00421 172 229 3.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS00715 00c8061162fd47b4eb9fbf8caef25dee 201 Gene3D G3DSA:3.10.490.10 3 159 4.4E-26 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like TMO_RS00715 00c8061162fd47b4eb9fbf8caef25dee 201 SUPERFAMILY SSF110857 6 125 1.7E-13 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like TMO_RS00715 00c8061162fd47b4eb9fbf8caef25dee 201 Pfam PF04752 ChaC-like protein 6 171 3.9E-44 T 22-04-2016 IPR006840 ChaC-like protein TMO_RS00715 00c8061162fd47b4eb9fbf8caef25dee 201 PANTHER PTHR12192:SF9 2 174 3.9E-50 T 22-04-2016 TMO_RS00715 00c8061162fd47b4eb9fbf8caef25dee 201 PANTHER PTHR12192 2 174 3.9E-50 T 22-04-2016 IPR006840 ChaC-like protein TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:2.60.260.20 162 225 6.2E-10 T 22-04-2016 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PANTHER PTHR24078 3 95 1.1E-68 T 22-04-2016 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 Pfam PF01556 DnaJ C terminal domain 167 303 5.3E-36 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 Pfam PF00226 DnaJ domain 5 66 1.3E-24 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF49493 164 234 4.19E-13 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PANTHER PTHR24078 117 305 1.1E-68 T 22-04-2016 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF49493 231 305 1.7E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 SMART SM00271 3 61 1.4E-24 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:2.60.260.20 228 304 3.3E-22 T 22-04-2016 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 Gene3D G3DSA:1.10.287.110 4 89 1.1E-26 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 SUPERFAMILY SSF46565 5 107 7.98E-25 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PANTHER PTHR24078:SF190 3 95 1.1E-68 T 22-04-2016 TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 132 151 3.6E-19 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 6 24 3.6E-19 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 41 61 3.6E-19 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PRINTS PR00625 DnaJ domain signature 24 39 3.6E-19 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10675 3fff609fa09b5413e8b9f2438f4d9398 332 PANTHER PTHR24078:SF190 117 305 1.1E-68 T 22-04-2016 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 Pfam PF00005 ABC transporter 363 512 2.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 SMART SM00382 372 558 7.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 Pfam PF00664 ABC transporter transmembrane region 53 288 9.2E-12 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 SUPERFAMILY SSF52540 340 580 2.66E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 Gene3D G3DSA:1.20.1560.10 20 331 4.4E-37 T 22-04-2016 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 SUPERFAMILY SSF90123 20 331 4.71E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 PANTHER PTHR24222:SF25 25 581 3.4E-186 T 22-04-2016 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 PANTHER PTHR24222 25 581 3.4E-186 T 22-04-2016 TMO_RS16525 533347ccfa0a6d3adcbc1c53fb8178ca 584 Gene3D G3DSA:3.40.50.300 346 576 6.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF00384 Molybdopterin oxidoreductase 294 724 2.3E-73 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.10.20.30 14 73 1.3E-8 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 101 140 5.9E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 18 95 3.8E-24 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF01568 Molydopterin dinucleotide binding domain 809 913 6.0E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 PIRSF PIRSF036643 15 946 0.0 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.40.228.10 372 563 2.0E-57 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF50692 775 918 6.33E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.30.70.20 216 247 1.7E-4 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF13187 4Fe-4S dicluster domain 166 223 2.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 PANTHER PTHR11615 235 937 1.8E-246 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 PANTHER PTHR11615 21 69 1.8E-246 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:2.40.40.20 768 919 9.6E-42 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF54862 93 232 4.18E-38 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF54292 19 92 1.01E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.40.50.740 294 371 7.7E-85 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.40.50.740 564 767 7.7E-85 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 847 874 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 242 917 8.7E-288 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 238 289 8.9E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:3.30.70.20 154 215 1.6E-13 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 PANTHER PTHR11615:SF112 235 937 1.8E-246 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 PANTHER PTHR11615:SF112 21 69 1.8E-246 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SUPERFAMILY SSF53706 237 767 5.89E-190 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SMART SM00929 101 141 8.3E-20 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 Gene3D G3DSA:2.20.25.90 248 291 5.9E-18 T 22-04-2016 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 SMART SM00926 237 291 1.3E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 167 178 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS05145 2e9f4e7641a794175f00f39ee3ea3505 946 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 210 221 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 PANTHER PTHR30505:SF6 1 147 2.6E-54 T 22-04-2016 TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.1E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 147 3.4E-48 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 PANTHER PTHR30505 1 147 2.6E-54 T 22-04-2016 TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 SUPERFAMILY SSF55804 1 147 1.31E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 TMO_RS00905 ef3e1bd3c961d0002db7a00591b6ada1 154 Gene3D G3DSA:3.40.930.10 1 147 3.3E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 SUPERFAMILY SSF52425 8 136 1.09E-35 T 22-04-2016 IPR006050 DNA photolyase, N-terminal TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 Pfam PF03441 FAD binding domain of DNA photolyase 300 449 1.1E-28 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:1.25.40.80 136 250 4.9E-11 T 22-04-2016 TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 PANTHER PTHR11455:SF21 8 457 1.3E-66 T 22-04-2016 TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 PANTHER PTHR11455 8 457 1.3E-66 T 22-04-2016 TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:3.40.50.620 9 134 1.5E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 SUPERFAMILY SSF48173 188 457 1.7E-45 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 Gene3D G3DSA:1.10.579.10 299 451 3.7E-29 T 22-04-2016 TMO_RS03995 f86624feed0d205c19f35a6e329a8f6d 493 Pfam PF00875 DNA photolyase 10 134 6.8E-25 T 22-04-2016 IPR006050 DNA photolyase, N-terminal TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 57 72 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 Pfam PF00146 NADH dehydrogenase 18 325 1.2E-133 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 PANTHER PTHR11432 1 336 1.2E-187 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 PANTHER PTHR11432:SF3 1 336 1.2E-187 T 22-04-2016 TMO_RS09910 fb1ce34cc05538bd3f971ce4c3b454a2 337 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 11 331 25.956 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 SMART SM00729 287 508 7.3E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 SUPERFAMILY SSF102114 263 482 1.06E-19 T 22-04-2016 TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 Gene3D G3DSA:3.80.30.20 289 482 1.1E-15 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 PANTHER PTHR11918 327 487 1.3E-24 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 PANTHER PTHR11918 6 309 1.3E-24 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 Pfam PF04055 Radical SAM superfamily 292 472 2.0E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 PANTHER PTHR11918:SF64 327 487 1.3E-24 T 22-04-2016 TMO_RS06925 8f3d08f1a4c50e1fe46d580d13d13c86 675 PANTHER PTHR11918:SF64 6 309 1.3E-24 T 22-04-2016 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PANTHER PTHR11686 9 532 5.2E-149 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 Pfam PF01019 Gamma-glutamyltranspeptidase 32 527 2.6E-113 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 SUPERFAMILY SSF56235 3 532 6.95E-134 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PANTHER PTHR11686:SF8 9 532 5.2E-149 T 22-04-2016 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 112 130 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 149 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 378 396 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 39 64 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 354 372 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS15175 31019b7abc1cd6065190e384b5dbca81 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 257 276 1.1E-30 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 PANTHER PTHR11360:SF126 18 415 3.4E-54 T 22-04-2016 TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 Gene3D G3DSA:1.20.1250.20 32 199 3.0E-13 T 22-04-2016 TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 Gene3D G3DSA:1.20.1250.20 233 409 2.0E-4 T 22-04-2016 TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 Pfam PF07690 Major Facilitator Superfamily 35 377 2.5E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 SUPERFAMILY SSF103473 21 412 1.7E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS01050 6458ec6437ec8d61902215fb0295c937 427 PANTHER PTHR11360 18 415 3.4E-54 T 22-04-2016 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 SUPERFAMILY SSF53901 274 395 7.81E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 PANTHER PTHR18919:SF110 5 397 2.1E-226 T 22-04-2016 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 199 279 1.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 8 127 1.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 PANTHER PTHR18919 5 397 2.1E-226 T 22-04-2016 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 146 198 4.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Gene3D G3DSA:3.40.47.10 280 395 4.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Pfam PF00108 Thiolase, N-terminal domain 8 265 8.9E-84 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 394 4.9E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 ProSitePatterns PS00099 Thiolases active site. 377 390 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 SUPERFAMILY SSF53901 8 273 3.01E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 PIRSF PIRSF000429 2 397 7.7E-111 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS12985 341d71fde31afcdcf961bf5f5be4cf6e 397 Pfam PF02803 Thiolase, C-terminal domain 273 394 3.1E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 PANTHER PTHR20941 79 348 7.1E-104 T 22-04-2016 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 121 134 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 Pfam PF00809 Pterin binding enzyme 88 328 9.9E-72 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 PANTHER PTHR20941:SF1 79 348 7.1E-104 T 22-04-2016 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 Gene3D G3DSA:3.20.20.20 82 345 6.0E-98 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 87 341 2.4E-87 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 SUPERFAMILY SSF51717 81 343 8.24E-88 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 TMO_RS04590 d978cffb65a1144914264efea0df41e4 348 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 87 102 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 SUPERFAMILY SSF47413 4 66 2.11E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 Gene3D G3DSA:1.10.260.40 3 67 6.8E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 Gene3D G3DSA:2.60.120.10 76 180 3.1E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 SMART SM00530 8 63 3.7E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 SUPERFAMILY SSF51182 48 181 1.64E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 PANTHER PTHR10245:SF42 1 182 7.7E-86 T 22-04-2016 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 PANTHER PTHR10245 1 182 7.7E-86 T 22-04-2016 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 Pfam PF01381 Helix-turn-helix 9 63 6.4E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS04755 f9010f57cb4abbf60bd4605a316d8ff7 182 Pfam PF07883 Cupin domain 108 175 6.1E-19 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 Gene3D G3DSA:1.10.10.10 3 56 4.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 PANTHER PTHR30154 1 151 5.0E-53 T 22-04-2016 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 SUPERFAMILY SSF54909 67 150 5.9E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 7.4E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 SUPERFAMILY SSF46785 3 94 2.73E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 SMART SM00344 5 114 1.9E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 6.1E-15 T 22-04-2016 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 PANTHER PTHR30154:SF28 1 151 5.0E-53 T 22-04-2016 TMO_RS01120 1d67b7baeb1570a00e1cfb7d3e478d14 153 Gene3D G3DSA:3.30.70.920 67 142 1.7E-27 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS17955 d377b76eeb4c4003127d46905c2cfe79 156 SMART SM00450 26 139 1.8E-8 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS17955 d377b76eeb4c4003127d46905c2cfe79 156 SUPERFAMILY SSF52821 20 155 3.4E-22 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS17955 d377b76eeb4c4003127d46905c2cfe79 156 Pfam PF00581 Rhodanese-like domain 26 132 2.8E-8 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS17955 d377b76eeb4c4003127d46905c2cfe79 156 Gene3D G3DSA:3.40.250.10 20 155 8.2E-42 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12860 74581bb1b7bf6e3e69dc69bc3f4aac59 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 1.2E-29 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_RS12860 74581bb1b7bf6e3e69dc69bc3f4aac59 256 PANTHER PTHR30502 1 254 2.1E-59 T 22-04-2016 TMO_RS12860 74581bb1b7bf6e3e69dc69bc3f4aac59 256 SUPERFAMILY SSF51621 4 254 4.71E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS12860 74581bb1b7bf6e3e69dc69bc3f4aac59 256 Gene3D G3DSA:3.20.20.60 2 253 3.4E-67 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 TIGRFAM TIGR01178 ade: adenine deaminase 15 560 3.6E-169 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 Pfam PF13382 Adenine deaminase C-terminal domain 391 557 2.2E-66 T 22-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 SUPERFAMILY SSF51338 312 343 8.65E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 SUPERFAMILY SSF51338 8 66 8.65E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 PANTHER PTHR11113 384 556 5.2E-171 T 22-04-2016 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 PANTHER PTHR11113 1 345 5.2E-171 T 22-04-2016 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 Pfam PF01979 Amidohydrolase family 62 343 1.1E-22 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 PANTHER PTHR11113:SF2 384 556 5.2E-171 T 22-04-2016 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 PANTHER PTHR11113:SF2 1 345 5.2E-171 T 22-04-2016 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 SUPERFAMILY SSF51556 66 312 1.13E-31 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 Gene3D G3DSA:2.30.40.10 258 344 2.1E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 Hamap MF_01518 Adenine deaminase [ade]. 15 561 36.489 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 TMO_RS01600 18a3d829ebe66a3df769252131c2bd0e 562 Gene3D G3DSA:2.30.40.10 14 105 7.7E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:1.10.1160.10 237 317 3.7E-16 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PANTHER PTHR11451 3 381 7.9E-71 T 22-04-2016 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 450 26.815 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:3.40.50.620 2 67 1.9E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:3.40.50.620 184 233 1.9E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 3.4E-74 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:1.10.10.350 369 447 2.8E-11 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 SUPERFAMILY SSF52374 3 300 1.93E-91 T 22-04-2016 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PANTHER PTHR11451:SF41 3 381 7.9E-71 T 22-04-2016 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 Gene3D G3DSA:3.90.800.10 68 181 6.0E-30 T 22-04-2016 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 323 1.0E-94 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 SUPERFAMILY SSF48163 282 447 4.58E-26 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 4.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 4.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 4.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 4.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS11560 a3198063bceb6b74644c1b3d2ee348a7 451 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 4.3E-23 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 Pfam PF00067 Cytochrome P450 118 215 7.8E-16 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 SUPERFAMILY SSF48264 41 228 2.49E-41 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 Gene3D G3DSA:1.10.630.10 1 239 7.5E-50 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PANTHER PTHR11712 1 213 2.2E-30 T 22-04-2016 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 188 197 - T 22-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 186 195 1.6E-20 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 137 164 1.6E-20 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 120 131 1.6E-20 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 165 180 1.6E-20 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS29650 74c7fe40e19b0aa3b684c250c091e67c 244 PRINTS PR00359 B-class P450 signature 195 206 1.6E-20 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 SMART SM00382 44 239 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 Gene3D G3DSA:3.40.50.300 21 247 3.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 PANTHER PTHR24220 20 243 6.6E-62 T 22-04-2016 TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 SUPERFAMILY SSF52540 14 237 6.43E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 Pfam PF00005 ABC transporter 36 177 7.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06445 379e3ec0e67f5eadc3d814ddacb69bc2 251 PANTHER PTHR24220:SF581 20 243 6.6E-62 T 22-04-2016 TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 SUPERFAMILY SSF51735 294 328 5.67E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 SUPERFAMILY SSF51735 2 266 5.67E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 195 2.0E-23 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 PANTHER PTHR10366 281 333 1.6E-47 T 22-04-2016 TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 PANTHER PTHR10366 4 261 1.6E-47 T 22-04-2016 TMO_RS10905 c133754226a27c21d8f3a5b7c0e973bd 341 Gene3D G3DSA:3.40.50.720 4 321 7.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 Gene3D G3DSA:3.40.1090.10 44 245 6.0E-7 T 22-04-2016 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 PANTHER PTHR14226 161 295 1.4E-47 T 22-04-2016 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 PANTHER PTHR14226 24 125 1.4E-47 T 22-04-2016 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 PANTHER PTHR14226:SF37 161 295 1.4E-47 T 22-04-2016 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 PANTHER PTHR14226:SF37 24 125 1.4E-47 T 22-04-2016 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 Pfam PF01734 Patatin-like phospholipase 50 243 9.6E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 SUPERFAMILY SSF52151 48 124 4.19E-48 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10630 d3a640c85257b32a608168d3c54451c8 379 SUPERFAMILY SSF52151 155 359 4.19E-48 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 444 4.7E-27 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 357 377 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 SUPERFAMILY SSF53067 253 485 5.06E-50 T 22-04-2016 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 PIRSF PIRSF000538 1 495 9.6E-96 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 Gene3D G3DSA:3.30.420.40 1 248 3.1E-47 T 22-04-2016 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 PANTHER PTHR10196 1 490 2.1E-115 T 22-04-2016 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 9.2E-51 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 SUPERFAMILY SSF53067 3 251 1.73E-50 T 22-04-2016 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 Gene3D G3DSA:3.30.420.40 251 492 8.0E-43 T 22-04-2016 TMO_RS06520 4e80676736c647a517d2d3617e58e280 498 PANTHER PTHR10196:SF73 1 490 2.1E-115 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF52777 6 181 5.67E-21 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 487 885 3.0E-117 T 22-04-2016 IPR010071 Amino acid adenylation domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.30.300.30 856 967 1.9E-25 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00501 AMP-binding enzyme 469 860 6.3E-86 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF56801 458 977 1.11E-135 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 PANTHER PTHR24095:SF137 5 1058 2.6E-190 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.980 610 772 1.8E-42 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 ProSitePatterns PS00455 Putative AMP-binding domain signature. 603 614 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00668 Condensation domain 5 293 6.4E-23 T 22-04-2016 IPR001242 Condensation domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SMART SM00824 Thioesterase 1069 1277 0.0032 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF52777 188 419 8.89E-30 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 ProSitePatterns PS00012 Phosphopantetheine attachment site. 989 1004 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SMART SM00823 Phosphopantetheine attachment site 962 1034 0.0016 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.1820 1219 1272 8.5E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.1820 1062 1164 8.5E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:2.30.38.10 773 850 2.0E-24 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF47336 959 1031 3.27E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00550 Phosphopantetheine attachment site 968 1030 6.9E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:3.40.50.980 460 609 2.0E-37 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 SUPERFAMILY SSF53474 1061 1280 5.72E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 PANTHER PTHR24095 5 1058 2.6E-190 T 22-04-2016 TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Gene3D G3DSA:1.10.1200.10 968 1033 1.1E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF13193 AMP-binding enzyme C-terminal domain 869 940 2.5E-9 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS28985 163b05adf227d1b260d8966459cc51d1 1289 Pfam PF00975 Thioesterase domain 1068 1271 1.7E-17 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 PANTHER PTHR21235 1 239 4.2E-101 T 22-04-2016 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 PANTHER PTHR21235:SF15 1 239 4.2E-101 T 22-04-2016 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 238 35.63 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 1.5E-80 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 SUPERFAMILY SSF51366 2 236 3.45E-73 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 Pfam PF00977 Histidine biosynthesis protein 3 230 1.1E-78 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 TMO_RS16935 0049675fccb6445ac754d86d04eb7cb0 243 Gene3D G3DSA:3.20.20.70 3 238 4.3E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 5.0E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 5.0E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.0E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.0E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.0E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PANTHER PTHR10836 1 331 1.4E-205 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PIRSF PIRSF000149 1 334 8.6E-141 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 SUPERFAMILY SSF55347 153 315 2.14E-73 T 22-04-2016 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 SMART SM00846 3 153 7.8E-91 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 Gene3D G3DSA:3.30.360.10 162 316 1.8E-76 T 22-04-2016 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 Gene3D G3DSA:3.40.50.720 1 161 2.5E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 153 2.6E-55 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 9.9E-131 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 PANTHER PTHR10836:SF50 1 331 1.4E-205 T 22-04-2016 TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 SUPERFAMILY SSF51735 1 181 3.41E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04465 9b7ba83bfee25f636d106569ae3b94e3 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 3.9E-68 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 Pfam PF13537 Glutamine amidotransferase domain 17 73 3.2E-6 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 PANTHER PTHR11772 393 462 1.9E-12 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 PANTHER PTHR11772 26 303 1.9E-12 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 SUPERFAMILY SSF52402 148 307 7.22E-29 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 SUPERFAMILY SSF52402 385 466 7.22E-29 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 Gene3D G3DSA:3.60.20.10 7 126 3.7E-20 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 PIRSF PIRSF001589 9 544 3.0E-39 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 SUPERFAMILY SSF56235 12 123 4.37E-14 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 Gene3D G3DSA:3.40.50.620 139 302 3.0E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 Gene3D G3DSA:3.40.50.620 368 523 3.0E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 PANTHER PTHR11772:SF11 393 462 1.9E-12 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 PANTHER PTHR11772:SF11 26 303 1.9E-12 T 22-04-2016 TMO_RS17075 ae61fbeb7e952b7783a3d24daa372f5f 547 Pfam PF00733 Asparagine synthase 156 525 6.3E-32 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_RS13030 fe525c1f61abc87772e6d2c842f13a1f 321 PANTHER PTHR30273 6 321 1.5E-44 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS13030 fe525c1f61abc87772e6d2c842f13a1f 321 PIRSF PIRSF018266 4 320 5.4E-73 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS13030 fe525c1f61abc87772e6d2c842f13a1f 321 Pfam PF04773 FecR protein 117 207 7.4E-20 T 22-04-2016 IPR006860 FecR protein TMO_RS13030 fe525c1f61abc87772e6d2c842f13a1f 321 PANTHER PTHR30273:SF2 6 321 1.5E-44 T 22-04-2016 TMO_RS13030 fe525c1f61abc87772e6d2c842f13a1f 321 Pfam PF16220 Domain of unknown function (DUF4880) 16 55 3.8E-13 T 22-04-2016 IPR032623 FecR, N-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 49 0.0015 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 5 22 0.14 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 257 272 29.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 87 103 0.015 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 51 67 0.34 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 68 85 0.019 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 304 321 0.0048 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 255 0.0057 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 340 357 0.035 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 59.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 122 139 0.0017 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 0.0011 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 9 142 1.96E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 5 169 3.0E-38 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Gene3D G3DSA:2.150.10.10 220 398 5.8E-32 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 PANTHER PTHR38340 10 446 8.7E-16 T 22-04-2016 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 Pfam PF08548 Peptidase M10 serralysin C terminal 298 447 1.2E-9 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 153 298 1.07E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 248 257 5.5E-10 T 22-04-2016 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 39 50 5.5E-10 T 22-04-2016 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 123 131 5.5E-10 T 22-04-2016 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 PRINTS PR00313 NodO calcium binding signature 105 113 5.5E-10 T 22-04-2016 TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 SUPERFAMILY SSF51120 262 445 2.09E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 244 262 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 110 128 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 119 137 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 29 47 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 65 83 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 328 346 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06620 4c14d8e785445b595a69e12f6472ba0e 461 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 56 74 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.30.1490.20 127 194 9.5E-20 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.30.470.20 195 366 1.2E-63 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 17 364 1.1E-113 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 16 368 40.899 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF52440 8 109 3.6E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF51246 319 366 5.41E-14 T 22-04-2016 IPR011054 Rudiment single hybrid motif TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 PANTHER PTHR11609 1 365 1.2E-130 T 22-04-2016 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 Gene3D G3DSA:3.40.50.20 12 119 6.6E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 Pfam PF02222 ATP-grasp domain 122 294 1.0E-52 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 PANTHER PTHR11609:SF5 1 365 1.2E-130 T 22-04-2016 TMO_RS04230 436ad318da741e997cdc6f8e942cbc8a 371 SUPERFAMILY SSF56059 112 314 1.17E-61 T 22-04-2016 TMO_RS13100 c5713b57ce58f8a3a17b4030ced07784 245 Gene3D G3DSA:1.10.3580.10 74 230 2.7E-50 T 22-04-2016 IPR023335 Orthogonal Bundle domain in ATP12 TMO_RS13100 c5713b57ce58f8a3a17b4030ced07784 245 SUPERFAMILY SSF160909 7 230 4.84E-73 T 22-04-2016 TMO_RS13100 c5713b57ce58f8a3a17b4030ced07784 245 PANTHER PTHR21013 1 230 2.3E-62 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 TMO_RS13100 c5713b57ce58f8a3a17b4030ced07784 245 Gene3D G3DSA:3.30.2180.10 6 71 3.2E-21 T 22-04-2016 TMO_RS13100 c5713b57ce58f8a3a17b4030ced07784 245 Pfam PF07542 ATP12 chaperone protein 9 133 2.7E-36 T 22-04-2016 IPR011419 ATP12, ATPase F1F0-assembly protein GO:0043461 TMO_RS07265 f05282efa65f511581f0532de376f602 285 SUPERFAMILY SSF53474 4 275 4.12E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS07265 f05282efa65f511581f0532de376f602 285 PANTHER PTHR10992 5 277 2.8E-37 T 22-04-2016 TMO_RS07265 f05282efa65f511581f0532de376f602 285 Pfam PF12697 Alpha/beta hydrolase family 24 269 1.1E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS07265 f05282efa65f511581f0532de376f602 285 Gene3D G3DSA:3.40.50.1820 3 276 3.7E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04345 000c767d7bc95ba765857c7d6e209c7e 314 PANTHER PTHR32196 17 314 5.2E-82 T 22-04-2016 TMO_RS04345 000c767d7bc95ba765857c7d6e209c7e 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 279 1.3E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS04345 000c767d7bc95ba765857c7d6e209c7e 314 PANTHER PTHR32196:SF40 17 314 5.2E-82 T 22-04-2016 TMO_RS05730 a2e97782fce2073f40412465c0c77f96 415 Pfam PF01476 LysM domain 364 411 3.8E-8 T 22-04-2016 IPR018392 LysM domain TMO_RS05730 a2e97782fce2073f40412465c0c77f96 415 PANTHER PTHR34700 326 415 5.3E-19 T 22-04-2016 TMO_RS05730 a2e97782fce2073f40412465c0c77f96 415 SMART SM00257 362 411 2.0E-4 T 22-04-2016 IPR018392 LysM domain TMO_RS05730 a2e97782fce2073f40412465c0c77f96 415 SUPERFAMILY SSF54106 361 411 6.41E-6 T 22-04-2016 IPR018392 LysM domain TMO_RS05730 a2e97782fce2073f40412465c0c77f96 415 Gene3D G3DSA:3.10.350.10 361 412 6.7E-8 T 22-04-2016 IPR018392 LysM domain TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 SMART SM00839 141 350 7.1E-66 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 SUPERFAMILY SSF53223 5 143 1.02E-44 T 22-04-2016 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 4.4E-15 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 193 4.4E-15 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 283 294 4.4E-15 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PIRSF PIRSF000188 1 352 4.1E-144 T 22-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PANTHER PTHR11606:SF3 25 349 9.7E-119 T 22-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 218 329 1.1E-8 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 Gene3D G3DSA:3.40.192.10 1 148 2.5E-62 T 22-04-2016 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 Gene3D G3DSA:3.40.50.720 149 334 1.3E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 SUPERFAMILY SSF51735 140 345 3.94E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 14 130 3.6E-26 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 TMO_RS12940 c8d7b6eadb2fbdfb28c2702680be4370 355 PANTHER PTHR11606 25 349 9.7E-119 T 22-04-2016 TMO_RS03125 964494a62059f7729279de7ec201d9f8 274 SUPERFAMILY SSF53335 20 223 1.11E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS03125 964494a62059f7729279de7ec201d9f8 274 Gene3D G3DSA:3.40.50.150 37 186 5.4E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS03125 964494a62059f7729279de7ec201d9f8 274 Pfam PF05050 Methyltransferase FkbM domain 59 202 4.7E-7 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS03125 964494a62059f7729279de7ec201d9f8 274 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 56 178 4.3E-16 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS17770 7ab24d05f9865cd4f4951cd495781ec2 146 Pfam PF01475 Ferric uptake regulator family 10 129 7.2E-41 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_RS17770 7ab24d05f9865cd4f4951cd495781ec2 146 Gene3D G3DSA:1.10.10.10 2 81 3.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17770 7ab24d05f9865cd4f4951cd495781ec2 146 PANTHER PTHR33202 1 131 4.2E-37 T 22-04-2016 TMO_RS17770 7ab24d05f9865cd4f4951cd495781ec2 146 SUPERFAMILY SSF46785 4 131 5.44E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 SMART SM00283 478 725 2.0E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 Gene3D G3DSA:1.10.287.950 490 696 1.2E-44 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 SMART SM00304 385 437 2.8E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 PANTHER PTHR32089:SF40 449 728 8.7E-224 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 PANTHER PTHR32089:SF40 107 419 8.7E-224 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 Pfam PF02743 Cache domain 57 337 1.3E-16 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 PANTHER PTHR32089 449 728 8.7E-224 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 PANTHER PTHR32089 107 419 8.7E-224 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 SUPERFAMILY SSF58104 477 724 1.7E-63 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 SUPERFAMILY SSF58104 407 439 1.7E-63 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 Pfam PF00672 HAMP domain 366 434 3.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 Gene3D G3DSA:3.30.450.20 210 350 1.9E-9 T 22-04-2016 TMO_RS12565 a41789db2ee79a32871a7a444c1c5b5e 730 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 547 724 4.3E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 PANTHER PTHR11624 3 327 1.5E-178 T 22-04-2016 IPR033247 Transketolase family TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 Gene3D G3DSA:3.40.50.920 195 323 8.0E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.8E-51 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 SUPERFAMILY SSF52922 188 325 1.26E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 Pfam PF02780 Transketolase, C-terminal domain 194 316 4.7E-43 T 22-04-2016 IPR033248 Transketolase, C-terminal domain TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 SMART SM00861 4 179 7.0E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 SUPERFAMILY SSF52518 3 191 3.24E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS08625 db55bf74eccf66e0ac62e3bc857a2286 328 Gene3D G3DSA:3.40.50.970 2 194 6.4E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS00990 0cb74c843ea9a34537d91865254c4b09 272 PANTHER PTHR16138 21 272 2.2E-94 T 22-04-2016 TMO_RS00990 0cb74c843ea9a34537d91865254c4b09 272 SUPERFAMILY SSF53474 8 252 9.57E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00990 0cb74c843ea9a34537d91865254c4b09 272 Pfam PF12697 Alpha/beta hydrolase family 45 236 7.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS00990 0cb74c843ea9a34537d91865254c4b09 272 Gene3D G3DSA:3.40.50.1820 41 150 1.4E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00990 0cb74c843ea9a34537d91865254c4b09 272 Gene3D G3DSA:3.40.50.1820 198 265 1.4E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 5.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 37 5.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 5.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 PANTHER PTHR30154 13 165 3.1E-27 T 22-04-2016 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 Gene3D G3DSA:3.30.70.920 86 155 6.9E-8 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 Gene3D G3DSA:1.10.10.10 19 72 6.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 SUPERFAMILY SSF46785 20 71 1.95E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 SMART SM00344 21 130 7.2E-12 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 SUPERFAMILY SSF54909 87 160 6.03E-9 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 Pfam PF13404 AsnC-type helix-turn-helix domain 21 62 5.2E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS16485 df76c45471a1ef0d268a5bf7a110d6e0 165 Pfam PF01037 Lrp/AsnC ligand binding domain 99 158 2.7E-9 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PANTHER PTHR10992:SF732 191 291 6.0E-40 T 22-04-2016 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PANTHER PTHR10992:SF732 31 166 6.0E-40 T 22-04-2016 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 235 249 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 Pfam PF00561 alpha/beta hydrolase fold 31 273 6.8E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PANTHER PTHR10992 191 291 6.0E-40 T 22-04-2016 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 PANTHER PTHR10992 31 166 6.0E-40 T 22-04-2016 TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 SUPERFAMILY SSF53474 12 289 3.38E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16330 5d2a30837c6742edcdcf65ea5649d769 296 Gene3D G3DSA:3.40.50.1820 26 290 3.1E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 PANTHER PTHR30537:SF5 1 301 2.6E-131 T 22-04-2016 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 SUPERFAMILY SSF53850 88 298 9.05E-51 T 22-04-2016 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:3.40.190.10 177 260 1.3E-21 T 22-04-2016 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 Pfam PF03466 LysR substrate binding domain 88 294 4.4E-50 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.8E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:1.10.10.10 3 83 2.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 PANTHER PTHR30537 1 301 2.6E-131 T 22-04-2016 TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 SUPERFAMILY SSF46785 4 111 4.63E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15230 4adbfbbfe90196397835432d22ab92f8 304 Gene3D G3DSA:3.40.190.10 84 176 1.8E-10 T 22-04-2016 TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 Gene3D G3DSA:3.40.50.1100 118 381 1.2E-37 T 22-04-2016 TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 SUPERFAMILY SSF53686 32 354 6.55E-58 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 PANTHER PTHR10314 42 88 1.3E-64 T 22-04-2016 TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 PANTHER PTHR10314 111 380 1.3E-64 T 22-04-2016 TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 37 373 7.6E-62 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 PANTHER PTHR10314:SF127 42 88 1.3E-64 T 22-04-2016 TMO_RS12310 d980c06b6b6024df6664c9860eed5a6c 403 PANTHER PTHR10314:SF127 111 380 1.3E-64 T 22-04-2016 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 SMART SM00862 150 225 6.4E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 SUPERFAMILY SSF46894 126 226 1.7E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 SUPERFAMILY SSF52172 2 129 1.57E-45 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 Gene3D G3DSA:1.10.10.10 128 227 2.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 Pfam PF00072 Response regulator receiver domain 5 117 4.6E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 5.0E-107 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 SMART SM00448 3 116 7.8E-47 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 Gene3D G3DSA:3.40.50.2300 2 123 2.7E-44 T 22-04-2016 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 PANTHER PTHR26402:SF576 3 223 4.9E-101 T 22-04-2016 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 PANTHER PTHR26402 3 223 4.9E-101 T 22-04-2016 TMO_RS17670 d2ddcbb947324bcecf898fefcea6b1a3 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.1E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS02865 5958b03d037bf032648d249763081d43 93 SMART SM00966 9 49 9.8E-5 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_RS02865 5958b03d037bf032648d249763081d43 93 Gene3D G3DSA:2.10.260.10 3 61 7.2E-7 T 22-04-2016 TMO_RS02865 5958b03d037bf032648d249763081d43 93 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 47 9.0E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_RS02865 5958b03d037bf032648d249763081d43 93 SUPERFAMILY SSF89447 5 69 4.6E-13 T 22-04-2016 TMO_RS02865 5958b03d037bf032648d249763081d43 93 PANTHER PTHR37550:SF1 1 78 6.2E-25 T 22-04-2016 TMO_RS02865 5958b03d037bf032648d249763081d43 93 PANTHER PTHR37550 1 78 6.2E-25 T 22-04-2016 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 SUPERFAMILY SSF54995 1 104 7.72E-32 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.494 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 PANTHER PTHR21011 1 131 1.7E-23 T 22-04-2016 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 94 9.9E-21 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 Gene3D G3DSA:3.30.70.60 1 105 1.1E-32 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 TMO_RS09390 5ffea5f13e8cdaf7e6f5518ac4919962 150 Pfam PF01250 Ribosomal protein S6 4 92 5.2E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 TMO_RS29380 28cfd969c5b06ba78aa98ace93e2ba8b 314 PANTHER PTHR30383:SF5 59 274 8.1E-43 T 22-04-2016 TMO_RS29380 28cfd969c5b06ba78aa98ace93e2ba8b 314 PANTHER PTHR30383 59 274 8.1E-43 T 22-04-2016 TMO_RS29380 28cfd969c5b06ba78aa98ace93e2ba8b 314 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 92 264 3.7E-22 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS29380 28cfd969c5b06ba78aa98ace93e2ba8b 314 SUPERFAMILY SSF52266 88 276 2.11E-40 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS29380 28cfd969c5b06ba78aa98ace93e2ba8b 314 Gene3D G3DSA:3.40.50.1110 88 275 1.7E-40 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS03910 5d13624c4864bffa91b0da975dce8c13 190 Pfam PF09374 Predicted Peptidoglycan domain 105 172 1.0E-10 T 22-04-2016 IPR018537 Peptidoglycan binding domain TMO_RS03910 5d13624c4864bffa91b0da975dce8c13 190 SUPERFAMILY SSF53955 13 176 8.72E-41 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS03910 5d13624c4864bffa91b0da975dce8c13 190 Gene3D G3DSA:1.20.141.10 13 182 1.5E-46 T 22-04-2016 TMO_RS03910 5d13624c4864bffa91b0da975dce8c13 190 Pfam PF05838 Glycosyl hydrolase 108 18 102 2.4E-22 T 22-04-2016 IPR008565 Protein of unknown function DUF847 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PIRSF PIRSF000097 2 276 5.1E-68 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 SUPERFAMILY SSF51430 11 269 6.81E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 Gene3D G3DSA:3.20.20.100 10 270 7.0E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 1.7E-48 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.7E-48 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 36 60 1.7E-48 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 194 218 1.7E-48 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PRINTS PR00069 Aldo-keto reductase signature 92 110 1.7E-48 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 Pfam PF00248 Aldo/keto reductase family 17 259 8.9E-58 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 PANTHER PTHR11732 11 275 2.3E-131 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS07115 267bfd716ce812693eb7c839c03827f2 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 PANTHER PTHR19328 61 424 3.8E-96 T 22-04-2016 TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 PANTHER PTHR19328:SF26 61 424 3.8E-96 T 22-04-2016 TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 Gene3D G3DSA:2.120.10.30 64 423 2.4E-54 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 SUPERFAMILY SSF50952 394 423 2.62E-36 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 SUPERFAMILY SSF50952 64 337 2.62E-36 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 TMO_RS12675 2f6528d08bc26ccff96963db22b124e5 425 Pfam PF07995 Glucose / Sorbosone dehydrogenase 228 340 9.8E-12 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.8E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 Gene3D G3DSA:1.10.357.10 3 204 1.8E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 SUPERFAMILY SSF48498 82 204 1.96E-31 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 1.1E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 PANTHER PTHR30055 4 202 1.9E-32 T 22-04-2016 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 SUPERFAMILY SSF46689 3 74 1.49E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03290 5fcca2a2395afb87519513caecc4dc1a 204 PANTHER PTHR30055:SF73 4 202 1.9E-32 T 22-04-2016 TMO_RS10815 6882d178ace0293f8c022691374d1563 129 Gene3D G3DSA:2.102.10.10 10 113 3.3E-27 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS10815 6882d178ace0293f8c022691374d1563 129 SUPERFAMILY SSF50022 10 114 3.54E-29 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS10815 6882d178ace0293f8c022691374d1563 129 PANTHER PTHR21496 6 110 7.1E-12 T 22-04-2016 TMO_RS10815 6882d178ace0293f8c022691374d1563 129 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 11 109 1.1E-21 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TMO_RS10815 6882d178ace0293f8c022691374d1563 129 Pfam PF13806 Rieske-like [2Fe-2S] domain 11 109 5.5E-13 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 Pfam PF11563 Protoglobin 12 169 5.6E-38 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 Gene3D G3DSA:1.10.490.10 10 163 2.3E-44 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 SUPERFAMILY SSF58104 160 447 1.74E-56 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 SUPERFAMILY SSF46458 12 162 3.38E-37 T 22-04-2016 IPR009050 Globin-like TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 269 447 2.4E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 PANTHER PTHR32089:SF40 172 451 2.2E-88 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 PANTHER PTHR32089:SF40 82 99 2.2E-88 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 Gene3D G3DSA:1.10.287.950 209 418 2.0E-41 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 SMART SM00283 194 448 1.9E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 PANTHER PTHR32089 172 451 2.2E-88 T 22-04-2016 TMO_RS10080 8a05bb5939494f829794c4de13baf4ab 452 PANTHER PTHR32089 82 99 2.2E-88 T 22-04-2016 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 SUPERFAMILY SSF55620 28 136 2.82E-25 T 22-04-2016 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 Gene3D G3DSA:3.30.1130.10 14 140 1.5E-45 T 22-04-2016 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 Pfam PF14489 QueF-like protein 61 136 1.8E-30 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 27 135 5.1E-44 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 157 66.939 T 22-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 PANTHER PTHR34354 6 150 4.2E-52 T 22-04-2016 TMO_RS15605 232263b18528f409658b8f308a3cace6 157 PANTHER PTHR34354:SF1 6 150 4.2E-52 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00388 656 724 2.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF08447 PAS fold 418 489 2.1E-8 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.450.20 385 508 1.3E-21 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF47384 640 725 5.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.450.20 515 622 4.7E-13 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 390 511 2.5E-15 T 22-04-2016 IPR000014 PAS domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55785 507 634 7.68E-12 T 22-04-2016 IPR000014 PAS domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:1.10.287.130 648 720 6.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Gene3D G3DSA:3.30.565.10 733 879 1.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 879 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 822 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PRINTS PR00344 Bacterial sensor protein C-terminal signature 842 860 2.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00387 770 882 2.3E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00091 522 590 56.0 T 22-04-2016 IPR000014 PAS domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00091 392 458 1.6E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00086 465 510 3.3 T 22-04-2016 IPR001610 PAC motif TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SMART SM00086 596 636 36.0 T 22-04-2016 IPR001610 PAC motif TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55874 714 880 7.73E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 771 881 8.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PANTHER PTHR24423 374 463 1.2E-94 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PANTHER PTHR24423 596 882 1.2E-94 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 PANTHER PTHR24423 25 53 1.2E-94 T 22-04-2016 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 Pfam PF00512 His Kinase A (phospho-acceptor) domain 657 724 2.2E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29125 e0a230d42d8d43f565886fae4cda8703 914 SUPERFAMILY SSF55785 380 508 4.71E-19 T 22-04-2016 IPR000014 PAS domain TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 SUPERFAMILY SSF50891 39 187 8.33E-47 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 PANTHER PTHR11071 50 167 3.2E-43 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 77 94 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 Gene3D G3DSA:2.40.100.10 35 188 1.8E-44 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 56 71 5.1E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 148 5.1E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 149 164 5.1E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 94 5.1E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10585 a94f785b70fec9a5e9f049372bb89fe8 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 44 184 1.8E-41 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS04680 a20d4925fb15817cd0f1ed4f3c0fc320 123 SMART SM00448 4 117 5.4E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS04680 a20d4925fb15817cd0f1ed4f3c0fc320 123 Gene3D G3DSA:3.40.50.2300 3 121 4.6E-38 T 22-04-2016 TMO_RS04680 a20d4925fb15817cd0f1ed4f3c0fc320 123 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS04680 a20d4925fb15817cd0f1ed4f3c0fc320 123 SUPERFAMILY SSF52172 2 121 9.25E-38 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS04680 a20d4925fb15817cd0f1ed4f3c0fc320 123 PANTHER PTHR26402 4 119 5.2E-39 T 22-04-2016 TMO_RS07205 eab4d8e6eb39ce421f3fc064d3c5d251 158 SUPERFAMILY SSF52499 5 151 4.45E-16 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS07205 eab4d8e6eb39ce421f3fc064d3c5d251 158 Pfam PF00857 Isochorismatase family 7 151 4.0E-8 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS07205 eab4d8e6eb39ce421f3fc064d3c5d251 158 Gene3D G3DSA:3.40.50.850 4 139 1.7E-11 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 Gene3D G3DSA:3.50.50.60 32 155 1.4E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 Gene3D G3DSA:3.50.50.60 281 349 1.4E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 35 326 7.7E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PANTHER PTHR22912:SF158 20 347 1.2E-93 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 Gene3D G3DSA:3.50.50.60 157 276 4.3E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 1.0E-16 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 184 202 1.0E-16 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 36 55 1.0E-16 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.0E-16 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 Hamap MF_01685 Ferredoxin--NADP reductase. 33 363 41.158 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PANTHER PTHR22912 20 347 1.2E-93 T 22-04-2016 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 SUPERFAMILY SSF51905 34 344 2.59E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 35 57 8.5E-23 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 251 8.5E-23 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 310 328 8.5E-23 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 180 204 8.5E-23 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS02650 1920b7c319b852770cc642111f92509c 368 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 149 8.5E-23 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS02045 9e5c47dad2929fdea27009bdfd5aefc7 653 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 566 6.9E-70 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS02045 9e5c47dad2929fdea27009bdfd5aefc7 653 PANTHER PTHR33362:SF1 84 651 1.8E-128 T 22-04-2016 TMO_RS02045 9e5c47dad2929fdea27009bdfd5aefc7 653 PANTHER PTHR33362 84 651 1.8E-128 T 22-04-2016 TMO_RS02045 9e5c47dad2929fdea27009bdfd5aefc7 653 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 38 641 3.5E-144 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF47226 1 124 6.28E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF00072 Response regulator receiver domain 790 901 8.4E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:1.20.120.160 1 136 4.0E-37 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF52172 786 907 1.41E-29 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF55874 293 475 8.64E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF47384 230 290 7.85E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00260 469 616 1.1E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00260 642 767 0.0016 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 476 4.6E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:3.30.565.10 297 476 1.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM01231 229 289 7.7E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:3.40.50.2300 787 907 6.4E-30 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PANTHER PTHR22617:SF6 1 632 2.3E-188 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00073 1 98 6.1E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 6.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 431 6.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 6.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 6.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00448 788 901 2.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 230 289 1.2E-12 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF50341 476 615 5.75E-26 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.40.50.180 507 571 1.9E-12 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.40.50.180 667 725 2.0E-10 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SUPERFAMILY SSF50341 646 763 1.44E-13 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01584 CheW-like domain 482 618 6.4E-21 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01584 CheW-like domain 647 733 8.2E-7 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:1.10.287.560 229 290 5.2E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 PANTHER PTHR22617 1 632 2.3E-188 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 SMART SM00387 334 477 1.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Pfam PF01627 Hpt domain 3 95 7.6E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.30.30.40 477 498 8.0E-20 T 22-04-2016 TMO_RS06155 0b7a46f4ff39fe2ee0c6a66c843472b6 913 Gene3D G3DSA:2.30.30.40 572 615 8.0E-20 T 22-04-2016 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 Gene3D G3DSA:3.20.20.10 24 240 3.1E-52 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 Pfam PF01168 Alanine racemase, N-terminal domain 22 248 1.6E-47 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 SUPERFAMILY SSF51419 22 259 1.15E-52 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PANTHER PTHR30511:SF0 16 390 1.8E-92 T 22-04-2016 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 Pfam PF00842 Alanine racemase, C-terminal domain 259 382 1.4E-33 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 313 330 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 367 380 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 149 161 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 183 194 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 292 307 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 275 290 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 221 248 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PRINTS PR00992 Alanine racemase signature 44 60 1.3E-42 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 Gene3D G3DSA:2.40.37.10 241 387 7.1E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 49 59 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 SUPERFAMILY SSF50621 252 387 4.53E-40 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 PANTHER PTHR30511 16 390 1.8E-92 T 22-04-2016 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 Hamap MF_01201 Alanine racemase. 15 385 28.298 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 SMART SM01005 259 385 5.1E-50 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS09420 2ddacc12d2e60ee1f54a5e6a75009be8 408 TIGRFAM TIGR00492 alr: alanine racemase 18 382 8.9E-62 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS02825 06de651f6f7b5047a0698244a03c8b6f 316 Pfam PF00676 Dehydrogenase E1 component 1 293 1.5E-67 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 TMO_RS02825 06de651f6f7b5047a0698244a03c8b6f 316 PANTHER PTHR11516 1 302 1.4E-100 T 22-04-2016 TMO_RS02825 06de651f6f7b5047a0698244a03c8b6f 316 SUPERFAMILY SSF52518 1 302 2.14E-83 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02825 06de651f6f7b5047a0698244a03c8b6f 316 Gene3D G3DSA:3.40.50.970 1 303 2.8E-105 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS02825 06de651f6f7b5047a0698244a03c8b6f 316 PANTHER PTHR11516:SF25 1 302 1.4E-100 T 22-04-2016 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 SUPERFAMILY SSF53850 91 287 6.7E-34 T 22-04-2016 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 PANTHER PTHR30537 1 289 9.2E-67 T 22-04-2016 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 Gene3D G3DSA:3.40.190.10 174 255 8.9E-22 T 22-04-2016 TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 SUPERFAMILY SSF46785 6 112 4.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 Pfam PF03466 LysR substrate binding domain 89 284 1.2E-30 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 Gene3D G3DSA:1.10.10.10 7 90 4.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06860 c3dce9eebb4f3646189345fb85036d80 289 Gene3D G3DSA:3.40.190.10 94 173 1.1E-21 T 22-04-2016 TMO_RS09750 4d475f0e685411af04275189a4b688c6 333 Gene3D G3DSA:1.10.3470.10 5 327 5.4E-81 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS09750 4d475f0e685411af04275189a4b688c6 333 SUPERFAMILY SSF81345 4 323 5.36E-63 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS09750 4d475f0e685411af04275189a4b688c6 333 PANTHER PTHR30472 1 330 2.0E-77 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS09750 4d475f0e685411af04275189a4b688c6 333 Pfam PF01032 FecCD transport family 21 323 1.1E-71 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 Gene3D G3DSA:3.30.420.40 95 256 2.0E-50 T 22-04-2016 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 36.63 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 247 2.7E-69 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 SUPERFAMILY SSF53067 1 123 1.88E-35 T 22-04-2016 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 Pfam PF03309 Type III pantothenate kinase 2 207 6.8E-73 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 PANTHER PTHR34265 1 255 3.4E-71 T 22-04-2016 TMO_RS09870 959244e07102de1c8a7d6aa352e09bd1 259 SUPERFAMILY SSF53067 125 253 8.03E-40 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 Gene3D G3DSA:3.40.50.720 177 195 1.0E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-47 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 PANTHER PTHR10160 1 373 6.6E-189 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 SUPERFAMILY SSF51735 137 303 2.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 Gene3D G3DSA:3.40.50.1770 1 176 4.8E-61 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 351 1.5E-79 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 Gene3D G3DSA:3.40.50.1770 196 351 3.6E-29 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 SMART SM01002 149 297 9.1E-83 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 SUPERFAMILY SSF52283 305 359 5.78E-67 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 SUPERFAMILY SSF52283 1 137 5.78E-67 T 22-04-2016 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 PIRSF PIRSF000183 1 371 4.5E-149 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 SMART SM01003 4 137 2.1E-80 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal TMO_RS04765 25cfd7c13645fd710744afa6e8623acd 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.7E-154 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 Gene3D G3DSA:1.10.10.10 8 87 4.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 PANTHER PTHR30537 1 294 5.7E-50 T 22-04-2016 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 SUPERFAMILY SSF53850 95 291 4.71E-26 T 22-04-2016 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 SUPERFAMILY SSF46785 7 117 3.33E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 Gene3D G3DSA:3.40.190.10 88 199 1.7E-11 T 22-04-2016 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 PANTHER PTHR30537:SF3 1 294 5.7E-50 T 22-04-2016 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 4.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08975 e8dcf6ea081ac5cd986188a8d427a32d 300 Pfam PF03466 LysR substrate binding domain 94 288 4.9E-23 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 123 4.3E-11 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 SUPERFAMILY SSF103025 19 232 9.73E-53 T 22-04-2016 TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 217 289 2.4E-8 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 PANTHER PTHR22602:SF0 20 282 9.5E-62 T 22-04-2016 TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 Gene3D G3DSA:3.30.70.1400 26 111 5.5E-23 T 22-04-2016 TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 177 242 5.9E-23 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site TMO_RS04980 90277484dafe595abf26a3eaac19ff94 309 PANTHER PTHR22602 20 282 9.5E-62 T 22-04-2016 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 10 220 1.5E-68 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PANTHER PTHR30070:SF1 4 224 1.7E-56 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PIRSF PIRSF002764 1 224 1.6E-73 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PANTHER PTHR30070 4 224 1.7E-56 T 22-04-2016 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 Pfam PF03379 CcmB protein 8 220 6.6E-70 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 57 74 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 105 123 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 80 103 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 136 159 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 31 52 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15510 b82e9a48b9397d5c6f7e8d4787e614c8 224 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 197 220 6.7E-64 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS11225 7b1529d2b2c02f39e7455c0854888753 319 PIRSF PIRSF037112 3 312 1.6E-107 T 22-04-2016 IPR017113 Antirestriction, ArdC TMO_RS11225 7b1529d2b2c02f39e7455c0854888753 319 Pfam PF08401 Domain of unknown function (DUF1738) 17 139 5.1E-40 T 22-04-2016 IPR013610 Domain of unknown function DUF1738 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 SUPERFAMILY SSF64518 193 309 9.15E-9 T 22-04-2016 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 SUPERFAMILY SSF64518 356 599 9.15E-9 T 22-04-2016 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 SUPERFAMILY SSF64518 144 154 9.15E-9 T 22-04-2016 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 PANTHER PTHR30033:SF1 3 602 1.7E-92 T 22-04-2016 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF00460 Flagella basal body rod protein 9 39 6.1E-8 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF07196 Flagellin hook IN motif 359 415 4.0E-6 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 PANTHER PTHR30033 3 602 1.7E-92 T 22-04-2016 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 PRINTS PR01005 Flagellar hook-associated protein signature 15 38 1.3E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 PRINTS PR01005 Flagellar hook-associated protein signature 567 591 1.3E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 560 600 1.8E-11 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_RS05480 3d0c54d1c9d17f72bdc4d539cfea981a 603 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 343 1.3E-72 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 205 315 3.8E-13 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 64 177 5.9E-6 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 SUPERFAMILY SSF55785 190 314 2.27E-22 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 Gene3D G3DSA:3.30.450.20 204 317 1.1E-24 T 22-04-2016 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 Gene3D G3DSA:3.30.450.20 57 169 5.4E-11 T 22-04-2016 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 Pfam PF00989 PAS fold 207 313 4.8E-14 T 22-04-2016 IPR013767 PAS fold GO:0006355 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 PANTHER PTHR24423:SF382 82 317 1.4E-13 T 22-04-2016 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 SMART SM00091 61 127 0.033 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 SMART SM00091 205 272 4.1E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 Pfam PF13188 PAS domain 63 102 3.6E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 PANTHER PTHR24423 82 317 1.4E-13 T 22-04-2016 TMO_RS22350 ffaded9a67ab49c8b2c767452df8521c 317 SUPERFAMILY SSF55785 57 169 5.48E-8 T 22-04-2016 IPR000014 PAS domain TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 Gene3D G3DSA:3.40.50.720 4 231 1.3E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PANTHER PTHR24322 151 182 9.9E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 PANTHER PTHR24322 10 135 9.9E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 Pfam PF00106 short chain dehydrogenase 8 193 1.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS17740 8b2acc19b94d90425be7879a3bd9e926 233 SUPERFAMILY SSF51735 1 231 1.33E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PANTHER PTHR24322 157 189 4.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PANTHER PTHR24322 12 141 4.2E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 Gene3D G3DSA:3.40.50.720 8 251 5.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 SUPERFAMILY SSF51735 4 250 4.26E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PANTHER PTHR24322:SF631 157 189 4.2E-35 T 22-04-2016 TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PANTHER PTHR24322:SF631 12 141 4.2E-35 T 22-04-2016 TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS09335 71c905ac1d5e79eaf7787ca0fdc00fc3 257 Pfam PF00106 short chain dehydrogenase 9 198 5.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 Gene3D G3DSA:3.30.1300.10 188 300 1.7E-24 T 22-04-2016 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 Hamap MF_00158 Pantothenate synthetase [panC]. 15 299 38.152 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 SUPERFAMILY SSF52374 14 299 7.7E-98 T 22-04-2016 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 Pfam PF02569 Pantoate-beta-alanine ligase 16 297 1.6E-91 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 PANTHER PTHR21299 1 297 1.3E-112 T 22-04-2016 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 PANTHER PTHR21299:SF1 1 297 1.3E-112 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 Gene3D G3DSA:3.40.50.620 10 187 1.0E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 37 94 3.6E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS02450 b5a84eea5606e8e01f83c476d44c3c5f 305 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 16 298 2.9E-79 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 Pfam PF00202 Aminotransferase class-III 28 445 1.6E-101 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 Gene3D G3DSA:3.40.640.10 61 320 3.5E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 Gene3D G3DSA:3.90.1150.10 321 448 2.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 SUPERFAMILY SSF53383 14 445 2.31E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 PANTHER PTHR11986 20 453 3.0E-154 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 PANTHER PTHR11986:SF85 20 453 3.0E-154 T 22-04-2016 TMO_RS14415 a7a33005ba4cf0ffc62a69c32a71879b 458 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 Pfam PF13416 Bacterial extracellular solute-binding protein 50 364 1.5E-44 T 22-04-2016 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 PANTHER PTHR30061 8 429 9.8E-87 T 22-04-2016 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 Gene3D G3DSA:3.40.190.10 45 164 1.4E-17 T 22-04-2016 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 Gene3D G3DSA:3.40.190.10 165 359 2.2E-41 T 22-04-2016 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 PANTHER PTHR30061:SF7 8 429 9.8E-87 T 22-04-2016 TMO_RS06640 7ee9b648840f7c9bf870abaf50dead41 430 SUPERFAMILY SSF53850 30 422 1.18E-70 T 22-04-2016 TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 Pfam PF00378 Enoyl-CoA hydratase/isomerase 37 267 4.0E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 SUPERFAMILY SSF52096 15 276 3.11E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 PANTHER PTHR11941:SF54 4 269 5.5E-56 T 22-04-2016 TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 Gene3D G3DSA:3.90.226.10 9 259 4.5E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 PANTHER PTHR11941 4 269 5.5E-56 T 22-04-2016 TMO_RS02720 38ba6b0713ca4d5442c77e146f1a2488 303 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 125 145 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 277 9.6E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 SMART SM00388 220 283 1.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 PANTHER PTHR24423 24 54 2.1E-28 T 22-04-2016 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 PANTHER PTHR24423 197 431 2.1E-28 T 22-04-2016 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 SMART SM00387 329 435 4.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 SUPERFAMILY SSF47384 213 277 1.82E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 Gene3D G3DSA:3.30.565.10 332 431 4.9E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 430 8.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 Gene3D G3DSA:1.10.287.130 215 276 2.5E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00115 5dd7f5e1db3c056a809f6576b8aa282b 449 SUPERFAMILY SSF55874 285 434 1.83E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 PANTHER PTHR30546:SF10 1 198 5.9E-114 T 22-04-2016 TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 200 40.946 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 PANTHER PTHR30546 1 198 5.9E-114 T 22-04-2016 TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 SUPERFAMILY SSF52218 1 198 5.5E-61 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 Pfam PF03358 NADPH-dependent FMN reductase 3 145 1.4E-11 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 198 6.6E-94 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 TMO_RS15225 f4f78d152505b2652c0362a223aaed74 201 Gene3D G3DSA:3.40.50.360 1 200 2.3E-73 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 PANTHER PTHR11920 213 387 3.3E-37 T 22-04-2016 TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 PANTHER PTHR11920:SF257 213 387 3.3E-37 T 22-04-2016 TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 SUPERFAMILY SSF55073 240 431 7.22E-42 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 SMART SM00044 195 408 1.6E-6 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 244 389 5.2E-24 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS15660 7f9a26bb9aec4f74dfc2b199b78c0159 436 Gene3D G3DSA:3.30.70.1230 243 387 4.9E-31 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 SUPERFAMILY SSF88659 191 284 2.62E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PIRSF PIRSF000770 9 297 1.1E-39 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PANTHER PTHR30376 1 281 9.4E-77 T 22-04-2016 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 98 106 3.2E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 251 266 3.2E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 74 87 3.2E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 266 277 3.2E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 PRINTS PR00046 Major sigma-70 factor signature 232 244 3.2E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 Pfam PF04542 Sigma-70 region 2 50 118 6.4E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 74 87 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 46 279 1.6E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 Gene3D G3DSA:1.10.10.10 224 284 3.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 Pfam PF04545 Sigma-70, region 4 228 278 1.4E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 SUPERFAMILY SSF88946 13 118 2.22E-38 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15395 ea8961a5bda145d0d86ea3e16de8a9b2 299 Gene3D G3DSA:1.10.601.10 11 115 1.6E-37 T 22-04-2016 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 PANTHER PTHR24220 13 421 1.6E-163 T 22-04-2016 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 272 0.0019 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 515 539 0.29 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 PANTHER PTHR24220:SF574 13 421 1.6E-163 T 22-04-2016 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 SUPERFAMILY SSF52540 11 265 3.69E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 SUPERFAMILY SSF52540 285 535 1.07E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 SMART SM00382 321 513 2.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 SMART SM00382 40 244 5.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Gene3D G3DSA:3.40.50.300 11 268 5.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Gene3D G3DSA:3.40.50.300 284 537 7.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF00005 ABC transporter 315 464 3.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16050 783aaeb52d62c4c51ecee77e191f60e5 545 Pfam PF00005 ABC transporter 33 194 9.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 438 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 252 266 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 331 352 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 9.1E-66 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 SUPERFAMILY SSF55424 332 444 3.26E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.9E-29 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.9E-29 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 4.9E-29 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 267 4.9E-29 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 4.9E-29 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 443 5.1E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.50.50.60 2 132 7.9E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 315 4.6E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 2 444 4.7E-185 T 22-04-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 SUPERFAMILY SSF51905 1 361 4.86E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PANTHER PTHR22912:SF106 1 447 1.6E-193 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.50.50.60 133 323 2.3E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PANTHER PTHR22912 1 447 1.6E-193 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 PIRSF PIRSF000350 1 442 1.0E-88 T 22-04-2016 TMO_RS11580 f733e5707151be707deff43252a9d91f 449 Gene3D G3DSA:3.30.390.30 335 447 2.9E-43 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 5.1E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 SUPERFAMILY SSF52540 5 246 2.07E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 PANTHER PTHR24220:SF358 7 249 4.1E-89 T 22-04-2016 TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 PANTHER PTHR24220 7 249 4.1E-89 T 22-04-2016 TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 Pfam PF00005 ABC transporter 22 177 6.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 Gene3D G3DSA:3.40.50.300 2 246 2.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03225 0d7f478b34c8d00e79530e6578b4f9c8 250 SMART SM00382 30 224 2.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 SUPERFAMILY SSF82866 256 275 3.53E-46 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 SUPERFAMILY SSF82866 318 516 3.53E-46 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 Pfam PF02355 Protein export membrane protein 343 512 9.4E-21 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 521 44.948 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081:SF1 33 97 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081:SF1 240 522 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081:SF1 146 204 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081 33 97 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081 240 522 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PANTHER PTHR30081 146 204 1.4E-146 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 271 501 1.2E-81 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 47 508 9.6E-146 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 Gene3D G3DSA:1.20.1640.10 317 518 8.8E-26 T 22-04-2016 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 Pfam PF07549 SecD/SecF GG Motif 39 64 2.2E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 485 508 5.2E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 410 434 5.2E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS07780 086c58264bb73f34c97e40046ecdad8a 522 PRINTS PR00702 Acriflavin resistance protein family signature 357 380 5.2E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 222 36.035 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 SUPERFAMILY SSF53790 4 220 1.24E-76 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 Gene3D G3DSA:3.30.950.10 113 223 1.2E-38 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 PIRSF PIRSF005917 1 289 4.8E-92 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 282 6.1E-68 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 204 1.2E-32 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 PANTHER PTHR21091 5 222 4.2E-75 T 22-04-2016 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 Gene3D G3DSA:3.40.1010.10 5 112 5.0E-11 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS17460 a6ed38e4f6137a5c35c0dc4175f1928f 296 PANTHER PTHR21091:SF18 5 222 4.2E-75 T 22-04-2016 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PANTHER PTHR30034 47 368 3.2E-96 T 22-04-2016 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 50 361 2.6E-88 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 Pfam PF02154 Flagellar motor switch protein FliM 77 269 1.9E-63 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 251 269 4.6E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 127 143 4.6E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 48 61 4.6E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PRINTS PR00955 Flagellar motor switch protein FliM signature 152 171 4.6E-23 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 Gene3D G3DSA:2.30.330.10 288 365 1.3E-10 T 22-04-2016 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 290 360 6.7E-18 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PIRSF PIRSF002888 11 368 9.0E-89 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 PANTHER PTHR30034:SF0 47 368 3.2E-96 T 22-04-2016 TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 SUPERFAMILY SSF101801 288 364 8.76E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) TMO_RS05540 5f498f3b2f176480a6c28643f3846866 368 SUPERFAMILY SSF103039 85 269 9.68E-10 T 22-04-2016 IPR028976 CheC-like domain TMO_RS08500 704c041cbb692c79227789171a3de0e0 259 Gene3D G3DSA:3.40.630.30 131 251 4.9E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS08500 704c041cbb692c79227789171a3de0e0 259 SUPERFAMILY SSF55729 130 254 4.12E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS08500 704c041cbb692c79227789171a3de0e0 259 Pfam PF00583 Acetyltransferase (GNAT) family 193 245 1.1E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 Pfam PF13493 Domain of unknown function (DUF4118) 1 63 2.0E-18 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 SUPERFAMILY SSF55781 83 215 3.27E-9 T 22-04-2016 IPR029016 GAF domain-like TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 SUPERFAMILY SSF47384 221 253 1.12E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 Gene3D G3DSA:1.10.287.130 221 251 1.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 Pfam PF13492 GAF domain 83 206 9.2E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 Gene3D G3DSA:3.30.450.40 58 216 3.2E-12 T 22-04-2016 IPR029016 GAF domain-like TMO_RS20135 f0301ff042c9c0e49089ba675dd89ff4 256 Gene3D G3DSA:1.20.120.620 1 57 1.1E-18 T 22-04-2016 TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.30.450.20 14 130 6.1E-6 T 22-04-2016 TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 Pfam PF00563 EAL domain 314 543 7.5E-60 T 22-04-2016 IPR001633 EAL domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.20.20.450 315 550 9.8E-66 T 22-04-2016 IPR001633 EAL domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 PANTHER PTHR33121:SF10 317 543 1.8E-49 T 22-04-2016 TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 SUPERFAMILY SSF55785 13 123 2.37E-6 T 22-04-2016 IPR000014 PAS domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 245 2.7E-5 T 22-04-2016 IPR000160 GGDEF domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 SMART SM00052 306 548 1.3E-58 T 22-04-2016 IPR001633 EAL domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 Gene3D G3DSA:3.30.70.270 142 247 8.8E-6 T 22-04-2016 TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 SUPERFAMILY SSF141868 315 543 5.1E-64 T 22-04-2016 IPR001633 EAL domain TMO_RS13655 2287fc78b881a54aa8a711617a19ad7d 558 PANTHER PTHR33121 317 543 1.8E-49 T 22-04-2016 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Pfam PF00593 TonB dependent receptor 464 717 1.0E-20 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 PANTHER PTHR32552 30 719 2.5E-48 T 22-04-2016 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 SUPERFAMILY SSF56935 45 719 9.16E-105 T 22-04-2016 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Gene3D G3DSA:2.170.130.10 49 184 1.8E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 702 719 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 175 1.2E-16 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS16540 fbd39b2bb08a1e9b7b6c09b4fc790dc2 719 Gene3D G3DSA:2.40.170.20 185 719 4.1E-72 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 Gene3D G3DSA:3.30.540.10 11 157 2.4E-39 T 22-04-2016 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 SUPERFAMILY SSF56655 12 261 5.1E-67 T 22-04-2016 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 7.5E-16 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 7.5E-16 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 7.5E-16 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 103 7.5E-16 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 Pfam PF00459 Inositol monophosphatase family 12 249 3.1E-41 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 87 100 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PANTHER PTHR20854:SF38 4 261 5.3E-93 T 22-04-2016 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 PANTHER PTHR20854 4 261 5.3E-93 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS16070 2313869f694460e69daafc5ff783f54a 264 Gene3D G3DSA:3.40.190.80 158 261 3.9E-18 T 22-04-2016 TMO_RS06285 fd77f727c384e5b516646533cb75ba5e 84 Pfam PF06627 Protein of unknown function (DUF1153) 15 70 1.1E-17 T 22-04-2016 IPR009534 Protein of unknown function DUF1153 TMO_RS06285 fd77f727c384e5b516646533cb75ba5e 84 Gene3D G3DSA:1.10.10.10 15 66 5.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06285 fd77f727c384e5b516646533cb75ba5e 84 SUPERFAMILY SSF48295 15 71 6.8E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 5 197 37.367 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 PIRSF PIRSF000190 4 197 9.3E-74 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 25 104 1.8E-26 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 7 197 1.5E-71 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 PANTHER PTHR10851:SF0 7 197 5.3E-92 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 157 197 1.1E-13 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 SUPERFAMILY SSF50475 7 197 8.23E-63 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 Gene3D G3DSA:2.30.110.10 7 197 1.9E-76 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS04960 130626fdb2d764ce968abeafb12b1c38 197 PANTHER PTHR10851 7 197 5.3E-92 T 22-04-2016 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 Gene3D G3DSA:3.40.309.10 279 464 1.8E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 PANTHER PTHR11699:SF49 2 488 3.1E-289 T 22-04-2016 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 PANTHER PTHR11699 2 488 3.1E-289 T 22-04-2016 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 41 487 2.1E-219 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 Pfam PF00171 Aldehyde dehydrogenase family 30 487 8.8E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 SUPERFAMILY SSF53720 19 492 5.89E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 Gene3D G3DSA:3.40.605.10 22 278 3.5E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS11585 b26b0681ac527496f66856fc485eae3c 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 Pfam PF00815 Histidinol dehydrogenase 24 428 1.3E-167 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 Gene3D G3DSA:3.40.50.1980 28 240 1.1E-80 T 22-04-2016 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 5.4E-85 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PIRSF PIRSF000099 6 431 3.2E-161 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 PANTHER PTHR21256 12 433 2.6E-197 T 22-04-2016 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 5.7E-161 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 41.674 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 SUPERFAMILY SSF53720 24 429 3.92E-89 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS05045 0a0e556bfa907624c63068f143cbbe93 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 PANTHER PTHR22981 1 282 1.6E-91 T 22-04-2016 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 PIRSF PIRSF000103 1 290 3.6E-68 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 1 14 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 Gene3D G3DSA:1.10.1040.10 162 282 8.2E-32 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 Gene3D G3DSA:3.40.50.720 1 160 3.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 PANTHER PTHR22981:SF48 1 282 1.6E-91 T 22-04-2016 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 162 280 2.5E-25 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 159 5.3E-42 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 SUPERFAMILY SSF51735 2 159 2.08E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01535 004eea2ef0fe9e6493a2bebfe8195bbb 296 SUPERFAMILY SSF48179 160 282 7.94E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 SUPERFAMILY SSF46785 86 160 2.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 14 172 5.0E-31 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 SUPERFAMILY SSF46785 10 80 1.63E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 Gene3D G3DSA:1.10.10.10 85 160 2.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 Pfam PF04079 Segregation and condensation complex subunit ScpB 15 168 1.5E-45 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 PANTHER PTHR34298:SF2 4 173 1.7E-49 T 22-04-2016 TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 PANTHER PTHR34298 4 173 1.7E-49 T 22-04-2016 TMO_RS07605 d6921c2e3345ce7c528cce1d5925a6e8 225 Gene3D G3DSA:1.10.10.10 11 81 2.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09045 f930f9e8c0a37097470c839793e5ee78 288 SUPERFAMILY SSF54593 4 267 2.86E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09045 f930f9e8c0a37097470c839793e5ee78 288 Pfam PF13468 Glyoxalase-like domain 10 183 5.4E-17 T 22-04-2016 IPR025870 Glyoxalase-like domain TMO_RS09045 f930f9e8c0a37097470c839793e5ee78 288 Gene3D G3DSA:3.10.180.10 173 277 6.9E-5 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SUPERFAMILY SSF90123 6 316 5.76E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 PANTHER PTHR24222 6 586 2.6E-203 T 22-04-2016 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Gene3D G3DSA:3.40.50.300 331 564 1.4E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Pfam PF00664 ABC transporter transmembrane region 62 229 3.8E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 PANTHER PTHR24222:SF24 6 586 2.6E-203 T 22-04-2016 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SMART SM00382 359 545 1.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 SUPERFAMILY SSF52540 326 568 1.22E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Gene3D G3DSA:1.20.1560.10 6 316 3.2E-30 T 22-04-2016 TMO_RS16530 fd4fe8a0b258f311bd13cd9c0388b5ad 591 Pfam PF00005 ABC transporter 352 499 6.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 SUPERFAMILY SSF46785 33 110 4.32E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 Pfam PF00392 Bacterial regulatory proteins, gntR family 38 100 1.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 74 3.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 74 90 3.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 Gene3D G3DSA:3.40.640.10 188 402 1.5E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 Pfam PF00155 Aminotransferase class I and II 167 434 2.0E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 PANTHER PTHR11751 131 511 3.5E-104 T 22-04-2016 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 SMART SM00345 41 100 8.3E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 SUPERFAMILY SSF53383 145 511 8.89E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 Gene3D G3DSA:1.10.10.10 35 101 2.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16740 4ee448cbfa4fb56f33256f57aa10ba6f 518 PANTHER PTHR11751:SF10 131 511 3.5E-104 T 22-04-2016 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.630.30 727 903 8.2E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.261 292 446 2.3E-23 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF51735 2 144 3.19E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF55729 731 895 1.54E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.261 137 291 9.5E-31 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SMART SM00881 9 104 1.8E-34 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 PANTHER PTHR11117 1 709 3.5E-265 T 22-04-2016 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF52210 136 295 1.44E-45 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Pfam PF00583 Acetyltransferase (GNAT) family 816 888 9.6E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 156 293 4.8E-53 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF52210 299 456 1.31E-43 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 PANTHER PTHR11117:SF8 1 709 3.5E-265 T 22-04-2016 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.40.50.720 3 136 2.3E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Pfam PF13549 ATP-grasp domain 483 704 2.6E-78 T 22-04-2016 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Pfam PF13380 CoA binding domain 13 139 3.6E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 SUPERFAMILY SSF56059 492 701 7.9E-39 T 22-04-2016 TMO_RS16750 20e115eeb645e78621ea33954f252b57 917 Gene3D G3DSA:3.30.1490.20 503 566 1.9E-5 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS03735 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 SUPERFAMILY SSF103481 181 285 1.44E-14 T 22-04-2016 TMO_RS03735 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 SUPERFAMILY SSF103481 50 140 4.97E-10 T 22-04-2016 TMO_RS03735 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 PANTHER PTHR32322 1 287 1.8E-39 T 22-04-2016 TMO_RS03735 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 Pfam PF00892 EamA-like transporter family 11 137 2.4E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS03735 0eeb3fb4a7b176fcb00ce45706e3f7b7 296 Pfam PF00892 EamA-like transporter family 147 278 5.9E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS04010 badee096994058abf78b9b77daf27137 232 Gene3D G3DSA:3.40.50.880 6 216 4.1E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS04010 badee096994058abf78b9b77daf27137 232 Pfam PF01965 DJ-1/PfpI family 9 166 2.2E-23 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS04010 badee096994058abf78b9b77daf27137 232 PANTHER PTHR11019 8 161 2.1E-47 T 22-04-2016 TMO_RS04010 badee096994058abf78b9b77daf27137 232 PANTHER PTHR11019:SF25 8 161 2.1E-47 T 22-04-2016 TMO_RS04010 badee096994058abf78b9b77daf27137 232 SUPERFAMILY SSF52317 6 186 4.19E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 Gene3D G3DSA:3.10.420.10 15 158 6.7E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 Pfam PF02556 Preprotein translocase subunit SecB 16 155 2.0E-55 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 16 154 2.1E-43 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 SUPERFAMILY SSF54611 9 154 1.59E-50 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 157 31.01 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 85 105 7.3E-25 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 135 153 7.3E-25 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 7.3E-25 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 109 131 7.3E-25 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PANTHER PTHR36918 5 158 7.2E-46 T 22-04-2016 TMO_RS17105 4853c3f28e8ccb3915245722986e0746 160 PANTHER PTHR36918:SF1 5 158 7.2E-46 T 22-04-2016 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 Gene3D G3DSA:3.40.1280.10 19 177 2.7E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 41 238 1.8E-51 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 SUPERFAMILY SSF75217 19 246 9.16E-91 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 PANTHER PTHR32125:SF1 22 245 1.5E-92 T 22-04-2016 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 22 245 1.8E-76 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 PANTHER PTHR32125 22 245 1.5E-92 T 22-04-2016 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 Gene3D G3DSA:1.10.1270.20 179 246 2.4E-29 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 PIRSF PIRSF000386 19 250 2.1E-88 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_RS16390 951d4de4df4e99c3dfc17ed643a9be75 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 97.36 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 Gene3D G3DSA:3.90.1150.10 2 32 9.3E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 Gene3D G3DSA:3.90.1150.10 297 379 9.3E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 2 378 1.2E-143 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 PANTHER PTHR11986:SF8 2 379 1.5E-146 T 22-04-2016 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 Pfam PF00202 Aminotransferase class-III 2 378 7.3E-93 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 SUPERFAMILY SSF53383 2 379 1.77E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 PANTHER PTHR11986 2 379 1.5E-146 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS19975 8db7e5f26d831e945dc94b7f378cd38d 379 Gene3D G3DSA:3.40.640.10 33 295 1.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 PANTHER PTHR33508 130 239 7.7E-54 T 22-04-2016 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 PANTHER PTHR33508 1 102 7.7E-54 T 22-04-2016 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 Pfam PF01914 MarC family integral membrane protein 114 232 3.8E-24 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 Pfam PF01914 MarC family integral membrane protein 4 106 2.8E-24 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 PANTHER PTHR33508:SF1 130 239 7.7E-54 T 22-04-2016 TMO_RS16700 41ddb6bbcdd17f923d451885b027a55b 241 PANTHER PTHR33508:SF1 1 102 7.7E-54 T 22-04-2016 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 SMART SM00840 342 401 1.8E-15 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 SUPERFAMILY SSF47323 317 462 2.09E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 PANTHER PTHR10890 1 462 1.1E-219 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 SUPERFAMILY SSF52374 4 313 4.56E-93 T 22-04-2016 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 463 38.134 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 462 1.3E-157 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 5.5E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 5.5E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 5.5E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 5.5E-31 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 Pfam PF09190 DALR domain 343 401 1.1E-13 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 Gene3D G3DSA:3.40.50.620 20 306 9.4E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 314 4.1E-122 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 TMO_RS11555 5fd7dc1405eb9b215c74119537265018 463 Gene3D G3DSA:1.20.120.640 308 382 7.7E-16 T 22-04-2016 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 Gene3D G3DSA:3.40.50.620 266 534 2.9E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 SUPERFAMILY SSF52402 266 535 7.06E-76 T 22-04-2016 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 Gene3D G3DSA:3.60.110.10 5 238 7.2E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 PIRSF PIRSF006630 2 554 4.4E-179 T 22-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 Pfam PF00795 Carbon-nitrogen hydrolase 6 251 4.1E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 TIGRFAM TIGR00552 nadE: NAD+ synthetase 277 530 1.8E-56 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 PANTHER PTHR23090 2 550 2.0E-142 T 22-04-2016 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 SUPERFAMILY SSF56317 4 244 1.96E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS11565 6d2198eaafe8457fab5847072f68f00d 554 Pfam PF02540 NAD synthase 270 526 4.7E-67 T 22-04-2016 IPR022310 NAD/GMP synthase TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 Gene3D G3DSA:1.10.10.10 146 201 9.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 Gene3D G3DSA:3.40.50.2300 1 145 5.0E-27 T 22-04-2016 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 Pfam PF00072 Response regulator receiver domain 4 114 3.7E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 SMART SM00448 1 114 6.9E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 6.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 6.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 6.0E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 SUPERFAMILY SSF46894 131 201 1.53E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 SUPERFAMILY SSF52172 1 129 2.85E-23 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 194 1.8E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 SMART SM00421 138 195 6.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 PANTHER PTHR26402:SF151 1 201 2.2E-46 T 22-04-2016 TMO_RS13805 d47cf5807476f98baf8f6105f4771f96 201 PANTHER PTHR26402 1 201 2.2E-46 T 22-04-2016 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PANTHER PTHR10992 3 161 5.3E-89 T 22-04-2016 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PANTHER PTHR10992 178 296 5.3E-89 T 22-04-2016 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 7.9E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 7.9E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 7.9E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 Gene3D G3DSA:3.40.50.1820 3 296 1.5E-90 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PANTHER PTHR10992:SF793 3 161 5.3E-89 T 22-04-2016 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PANTHER PTHR10992:SF793 178 296 5.3E-89 T 22-04-2016 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 Pfam PF00561 alpha/beta hydrolase fold 27 282 5.4E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 SUPERFAMILY SSF53474 3 296 4.29E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 238 254 1.1E-15 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 112 125 1.1E-15 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.1E-15 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 271 293 1.1E-15 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS14585 1dbf1d2f91febd93ecfd092f9e8cbf48 298 PRINTS PR00412 Epoxide hydrolase signature 98 111 1.1E-15 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF52540 354 401 5.52E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF52540 7 228 5.52E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SMART SM00957 6 388 5.3E-295 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF81767 227 354 4.45E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 823 20.356 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.40.50.300 355 402 2.9E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.40.50.300 5 228 2.9E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 325 347 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 117 127 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 101 115 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 63 87 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 362 379 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 399 412 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PRINTS PR00906 SecA protein signature 170 190 2.4E-69 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:1.10.3060.10 640 822 1.3E-55 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF07516 SecA Wing and Scaffold domain 609 819 1.7E-64 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF01043 SecA preprotein cross-linking domain 232 344 4.3E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PANTHER PTHR30612 4 506 0.0 T 22-04-2016 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 PANTHER PTHR30612 542 892 0.0 T 22-04-2016 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF07517 SecA DEAD-like domain 7 387 3.1E-132 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF52540 402 610 3.82E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 ProSitePatterns PS01312 SecA family signature. 486 501 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF81886 868 880 5.75E-78 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SUPERFAMILY SSF81886 612 831 5.75E-78 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 SMART SM00958 228 344 3.7E-72 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Pfam PF02810 SEC-C motif 872 890 4.8E-8 T 22-04-2016 IPR004027 SEC-C motif TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.90.1440.10 230 354 7.6E-45 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 Gene3D G3DSA:3.40.50.300 403 610 1.2E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01800 1637f0b2f5f07a339bc5adf4b5be7a9b 892 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 808 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 PANTHER PTHR22911:SF41 26 310 8.7E-98 T 22-04-2016 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 Pfam PF00892 EamA-like transporter family 25 157 2.7E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 SUPERFAMILY SSF103481 209 298 1.96E-5 T 22-04-2016 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 PANTHER PTHR22911 26 310 8.7E-98 T 22-04-2016 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 SUPERFAMILY SSF103481 59 160 5.49E-14 T 22-04-2016 TMO_RS00965 298bee27d22331dd612f334180a53a2f 310 TIGRFAM TIGR00688 rarD: protein RarD 30 275 2.1E-55 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 TMO_RS16600 1ae56b2f49642ab2f9767b4c40c9a47f 147 Pfam PF07681 DoxX 13 91 2.8E-16 T 22-04-2016 IPR032808 DoxX family TMO_RS16600 1ae56b2f49642ab2f9767b4c40c9a47f 147 PANTHER PTHR33452 1 143 1.1E-23 T 22-04-2016 TMO_RS16600 1ae56b2f49642ab2f9767b4c40c9a47f 147 PANTHER PTHR33452:SF1 1 143 1.1E-23 T 22-04-2016 TMO_RS22465 9fdb88faecfdfc4ed004c144924d7f25 130 Pfam PF13464 Domain of unknown function (DUF4115) 49 119 3.8E-19 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 SUPERFAMILY SSF51735 12 259 2.53E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PANTHER PTHR24322 21 149 1.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PANTHER PTHR24322 165 197 1.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 257 2.9E-68 T 22-04-2016 TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 1.7E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.1E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 2.1E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.1E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS02215 f3fbbf4f873d75f6c438bc38ac9c5bf0 261 Gene3D G3DSA:3.40.50.720 12 259 6.6E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 SUPERFAMILY SSF54001 7 260 1.28E-45 T 22-04-2016 TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 SMART SM00460 162 231 3.4E-23 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 PANTHER PTHR33490 1 276 1.4E-70 T 22-04-2016 TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 Pfam PF01841 Transglutaminase-like superfamily 119 229 1.8E-28 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 Gene3D G3DSA:3.90.260.10 167 257 1.8E-19 T 22-04-2016 IPR002931 Transglutaminase-like TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 1.5E-23 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal TMO_RS07665 e88324ac1257c8ccff9ffca6086867ec 278 PANTHER PTHR33490:SF5 1 276 1.4E-70 T 22-04-2016 TMO_RS06815 7e543ab3a5b90b0eaba6a9763ca381d3 302 SUPERFAMILY SSF161111 10 215 1.31E-21 T 22-04-2016 TMO_RS06815 7e543ab3a5b90b0eaba6a9763ca381d3 302 SUPERFAMILY SSF160240 222 297 3.66E-6 T 22-04-2016 TMO_RS06815 7e543ab3a5b90b0eaba6a9763ca381d3 302 Pfam PF01545 Cation efflux family 17 214 5.2E-22 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS06815 7e543ab3a5b90b0eaba6a9763ca381d3 302 Gene3D G3DSA:3.30.70.1350 215 296 1.4E-7 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain TMO_RS06815 7e543ab3a5b90b0eaba6a9763ca381d3 302 Gene3D G3DSA:1.20.1510.10 11 214 8.1E-20 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 Gene3D G3DSA:3.40.50.300 18 236 3.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 PANTHER PTHR24220 19 238 3.4E-97 T 22-04-2016 TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 PANTHER PTHR24220:SF380 19 238 3.4E-97 T 22-04-2016 TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 Pfam PF00005 ABC transporter 40 194 3.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 SMART SM00382 49 241 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 18 237 8.8E-96 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 TMO_RS10550 60ac89440aece80c16ac5fdeb530cc39 245 SUPERFAMILY SSF52540 18 238 1.86E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 SMART SM00347 32 135 4.9E-29 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 Pfam PF01047 MarR family 39 97 4.4E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 PANTHER PTHR33164:SF5 7 154 2.8E-61 T 22-04-2016 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 Gene3D G3DSA:1.10.10.10 5 145 1.7E-45 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 PANTHER PTHR33164 7 154 2.8E-61 T 22-04-2016 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS07880 e0a84093debc0411897968ccd10070dc 155 SUPERFAMILY SSF46785 3 147 1.03E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03645 b55fb41a87a467db6b0b16f44ba62f80 182 SUPERFAMILY SSF46689 20 141 3.94E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03645 b55fb41a87a467db6b0b16f44ba62f80 182 Pfam PF13592 Winged helix-turn helix 108 165 1.7E-20 T 22-04-2016 IPR025959 Winged helix-turn helix domain TMO_RS03645 b55fb41a87a467db6b0b16f44ba62f80 182 Pfam PF13551 Winged helix-turn helix 31 91 8.0E-11 T 22-04-2016 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 PANTHER PTHR30173 9 165 1.8E-33 T 22-04-2016 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 PANTHER PTHR30173:SF30 9 165 1.8E-33 T 22-04-2016 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 SUPERFAMILY SSF88659 91 165 4.36E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 Pfam PF08281 Sigma-70, region 4 113 165 1.3E-13 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 164 2.4E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 SUPERFAMILY SSF88946 9 83 5.49E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 Gene3D G3DSA:1.10.10.10 107 165 2.6E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 Pfam PF04542 Sigma-70 region 2 20 79 7.3E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS05245 c71b301bf337453b19b591a8a5b9c74b 174 Gene3D G3DSA:1.10.1740.10 10 93 3.1E-14 T 22-04-2016 TMO_RS11700 4a01fee66f08e161d0f1c3aa9b63e6ef 468 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 335 451 6.3E-21 T 22-04-2016 IPR006517 Archaeophage PsiM2, terminase large subunit TMO_RS11700 4a01fee66f08e161d0f1c3aa9b63e6ef 468 Pfam PF03237 Terminase-like family 66 451 7.9E-20 T 22-04-2016 IPR004921 Terminase, large subunit TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:2.40.110.10 127 229 2.2E-32 T 22-04-2016 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 PANTHER PTHR10909:SF229 4 392 4.8E-94 T 22-04-2016 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 SUPERFAMILY SSF47203 238 387 1.39E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:1.20.140.10 230 391 2.1E-20 T 22-04-2016 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 225 6.2E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Gene3D G3DSA:1.10.540.10 3 125 3.5E-25 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 PANTHER PTHR10909 4 392 4.8E-94 T 22-04-2016 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 123 1.6E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 385 3.3E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS16460 b9016f030ca5ad3a607f550f4f210f05 393 SUPERFAMILY SSF56645 2 250 2.23E-68 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:1.10.8.60 329 437 2.9E-34 T 22-04-2016 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 437 1.0E-188 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 104 1.7E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 SMART SM00382 51 326 2.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 SMART SM01086 329 423 2.2E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 185 323 1.5E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:3.40.50.300 7 112 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:3.40.50.300 239 325 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 PANTHER PTHR11262:SF3 212 437 1.4E-198 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 PANTHER PTHR11262:SF3 1 107 1.4E-198 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 SUPERFAMILY SSF52540 7 433 2.37E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 PANTHER PTHR11262 212 437 1.4E-198 T 22-04-2016 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 PANTHER PTHR11262 1 107 1.4E-198 T 22-04-2016 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 437 41.772 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:1.10.8.10 207 237 2.2E-27 T 22-04-2016 TMO_RS16870 d42c1132491ba5194b765dc47af38559 437 Gene3D G3DSA:1.10.8.10 113 168 2.2E-27 T 22-04-2016 TMO_RS08660 659b24f9dde82645922a014a5a9de962 579 PANTHER PTHR11795 80 578 2.7E-154 T 22-04-2016 TMO_RS08660 659b24f9dde82645922a014a5a9de962 579 Gene3D G3DSA:1.25.10.10 163 273 4.4E-4 T 22-04-2016 IPR011989 Armadillo-like helical TMO_RS08660 659b24f9dde82645922a014a5a9de962 579 Pfam PF02653 Branched-chain amino acid transport system / permease component 288 561 1.4E-54 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS08660 659b24f9dde82645922a014a5a9de962 579 PANTHER PTHR11795:SF349 80 578 2.7E-154 T 22-04-2016 TMO_RS08660 659b24f9dde82645922a014a5a9de962 579 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 285 575 3.7E-130 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF08548 Peptidase M10 serralysin C terminal 289 514 2.3E-7 T 22-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Gene3D G3DSA:2.150.10.10 295 480 1.5E-24 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Gene3D G3DSA:2.150.10.10 6 156 3.2E-29 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Gene3D G3DSA:2.150.10.10 161 264 9.7E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 407 423 0.0013 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 7.8 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 80 96 0.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 389 405 0.0077 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 305 321 35.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 115 131 0.39 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 62 78 0.21 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 248 264 0.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 26 42 0.02 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 163 180 1.3 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 7 23 0.73 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 182 198 1.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 43 60 0.0032 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 229 246 0.09 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 98 114 14.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR00313 NodO calcium binding signature 62 70 6.4E-10 T 22-04-2016 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR00313 NodO calcium binding signature 191 200 6.4E-10 T 22-04-2016 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR00313 NodO calcium binding signature 164 172 6.4E-10 T 22-04-2016 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR00313 NodO calcium binding signature 41 52 6.4E-10 T 22-04-2016 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 SUPERFAMILY SSF51120 6 138 3.03E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 SUPERFAMILY SSF51120 100 222 1.1E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 389 410 4.2E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 107 128 4.2E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 SUPERFAMILY SSF51120 229 352 3.47E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 SUPERFAMILY SSF51120 334 473 1.44E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 112 130 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 394 412 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 103 121 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 85 103 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06610 448d56887b75b023bc457f07014e6b8b 526 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 319 337 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 PANTHER PTHR24220 3 257 6.2E-66 T 22-04-2016 TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 PANTHER PTHR24220:SF558 3 257 6.2E-66 T 22-04-2016 TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 SUPERFAMILY SSF52540 2 235 1.57E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 Gene3D G3DSA:3.40.50.300 4 240 9.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 SMART SM00382 26 220 4.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06715 4e2f08f3393a577963ec428c0fcf1245 262 Pfam PF00005 ABC transporter 18 170 4.8E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 SMART SM00382 52 240 2.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 PANTHER PTHR24220:SF374 40 266 9.3E-143 T 22-04-2016 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 PANTHER PTHR24220:SF374 5 15 9.3E-143 T 22-04-2016 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 PANTHER PTHR24220 40 266 9.3E-143 T 22-04-2016 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 PANTHER PTHR24220 5 15 9.3E-143 T 22-04-2016 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 Pfam PF00005 ABC transporter 43 191 1.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 266 5.1E-104 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 Gene3D G3DSA:3.40.50.300 4 265 1.8E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14870 f3b5e0021c732ade8b151d462e11608d 273 SUPERFAMILY SSF52540 39 266 7.04E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01475 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 PANTHER PTHR30222 9 261 2.4E-75 T 22-04-2016 TMO_RS01475 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 SUPERFAMILY SSF161098 4 263 3.36E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01475 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 PANTHER PTHR30222:SF6 9 261 2.4E-75 T 22-04-2016 TMO_RS01475 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 Gene3D G3DSA:1.10.3720.10 7 263 2.0E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01475 6335bec3ca3f3bfbc5bfacb6feaa3e55 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 259 5.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PANTHER PTHR33516:SF2 1 74 6.8E-62 T 22-04-2016 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PANTHER PTHR33516:SF2 150 282 6.8E-62 T 22-04-2016 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 194 204 1.2E-8 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 234 246 1.2E-8 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 205 216 1.2E-8 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 SUPERFAMILY SSF51306 156 279 1.24E-31 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 Gene3D G3DSA:2.10.109.10 158 281 5.4E-39 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PANTHER PTHR33516 1 74 6.8E-62 T 22-04-2016 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 PANTHER PTHR33516 150 282 6.8E-62 T 22-04-2016 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 Hamap MF_00015 LexA repressor [lexA]. 1 281 31.556 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 Pfam PF00717 Peptidase S24-like 197 260 1.9E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 Gene3D G3DSA:1.10.10.10 2 67 2.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 TIGRFAM TIGR00498 lexA: repressor LexA 153 280 4.2E-36 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 SUPERFAMILY SSF46785 2 68 2.46E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08860 3b67a856d05fd9922f471eb7cfbb6a02 282 Pfam PF01726 LexA DNA binding domain 2 63 2.4E-13 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 308 5.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 SUPERFAMILY SSF55874 297 468 1.83E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 SUPERFAMILY SSF47384 223 309 6.47E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 SMART SM00387 354 469 3.1E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 468 1.5E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 Gene3D G3DSA:1.10.287.130 230 294 4.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 Gene3D G3DSA:3.30.565.10 295 468 2.3E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 SMART SM00388 237 308 7.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29565 c685c220304b9871d56c0cfeffe39bfb 469 PANTHER PTHR24423 216 469 1.5E-82 T 22-04-2016 TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 PANTHER PTHR13696 1 205 5.1E-35 T 22-04-2016 TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 PIRSF PIRSF009320 1 208 2.0E-47 T 22-04-2016 TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 SUPERFAMILY SSF52540 1 205 5.4E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 PANTHER PTHR13696:SF54 1 205 5.1E-35 T 22-04-2016 TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 156 6.8E-27 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_RS11765 bab40a226353ace53730108d70a0faa1 208 Gene3D G3DSA:3.40.50.300 1 206 3.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06495 696adedb82e55536b070104ce1e33577 521 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06495 696adedb82e55536b070104ce1e33577 521 SUPERFAMILY SSF52540 284 490 2.99E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06495 696adedb82e55536b070104ce1e33577 521 SUPERFAMILY SSF52540 14 236 1.17E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06495 696adedb82e55536b070104ce1e33577 521 SMART SM00382 291 486 7.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06495 696adedb82e55536b070104ce1e33577 521 SMART SM00382 40 236 2.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06495 696adedb82e55536b070104ce1e33577 521 PANTHER PTHR24220 17 392 2.4E-143 T 22-04-2016 TMO_RS06495 696adedb82e55536b070104ce1e33577 521 Gene3D G3DSA:3.40.50.300 284 498 1.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06495 696adedb82e55536b070104ce1e33577 521 Pfam PF00005 ABC transporter 31 180 1.9E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06495 696adedb82e55536b070104ce1e33577 521 Pfam PF00005 ABC transporter 284 437 1.4E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06495 696adedb82e55536b070104ce1e33577 521 PANTHER PTHR24220:SF416 17 392 2.4E-143 T 22-04-2016 TMO_RS06495 696adedb82e55536b070104ce1e33577 521 Gene3D G3DSA:3.40.50.300 12 236 9.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 28 473 8.3E-157 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 PANTHER PTHR11907:SF0 25 487 9.6E-235 T 22-04-2016 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Gene3D G3DSA:3.40.50.2020 283 450 2.6E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 PIRSF PIRSF000485 24 488 1.1E-170 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 27 475 47.495 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 SUPERFAMILY SSF56235 28 254 7.12E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 SUPERFAMILY SSF53271 262 481 6.29E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Pfam PF13522 Glutamine amidotransferase domain 84 221 2.5E-21 T 22-04-2016 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 PANTHER PTHR11907 25 487 9.6E-235 T 22-04-2016 TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Gene3D G3DSA:3.60.20.10 28 270 5.0E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS09445 31292ca9cd6d5bf6dc78c75a0d53ea46 496 Pfam PF00156 Phosphoribosyl transferase domain 288 397 1.8E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PANTHER PTHR11739 24 395 2.7E-140 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PIRSF PIRSF001369 17 391 9.5E-101 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 23 390 2.2E-141 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 ProSitePatterns PS00480 Citrate synthase signature. 273 285 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 SUPERFAMILY SSF48256 22 390 6.02E-117 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 323 339 1.8E-31 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 213 241 1.8E-31 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 191 206 1.8E-31 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 266 286 1.8E-31 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PRINTS PR00143 Citrate synthase signature 343 357 1.8E-31 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 Gene3D G3DSA:1.10.230.10 253 336 3.0E-25 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 Pfam PF00285 Citrate synthase, C-terminal domain 24 372 6.6E-107 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 Gene3D G3DSA:1.10.580.10 28 252 9.8E-71 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 TMO_RS12140 53545d1dc63426efb2e333bed57127af 399 PANTHER PTHR11739:SF4 24 395 2.7E-140 T 22-04-2016 TMO_RS04995 31dd18643c3192b4ad64d851878c8bc4 372 Gene3D G3DSA:3.40.50.2000 169 345 1.9E-33 T 22-04-2016 TMO_RS04995 31dd18643c3192b4ad64d851878c8bc4 372 Pfam PF13439 Glycosyltransferase Family 4 43 180 3.8E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain TMO_RS04995 31dd18643c3192b4ad64d851878c8bc4 372 PANTHER PTHR12526 99 369 2.1E-57 T 22-04-2016 TMO_RS04995 31dd18643c3192b4ad64d851878c8bc4 372 Pfam PF00534 Glycosyl transferases group 1 188 345 1.9E-35 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS04995 31dd18643c3192b4ad64d851878c8bc4 372 SUPERFAMILY SSF53756 34 367 2.86E-72 T 22-04-2016 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 PANTHER PTHR24220:SF493 22 338 3.3E-170 T 22-04-2016 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 PANTHER PTHR24220 22 338 3.3E-170 T 22-04-2016 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 SUPERFAMILY SSF52540 32 269 1.08E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 332 1.0E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 Pfam PF00005 ABC transporter 46 197 4.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 SMART SM00382 55 247 2.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 314 2.7E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS15195 ccbc3727517721a9ed65ef5d40ffdde6 341 Gene3D G3DSA:3.40.50.300 19 271 3.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 PANTHER PTHR22935 1 174 3.6E-49 T 22-04-2016 TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 SUPERFAMILY SSF55166 11 166 1.23E-54 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 PIRSF PIRSF026671 3 180 9.5E-53 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 Pfam PF01427 D-ala-D-ala dipeptidase 10 175 4.0E-45 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 PANTHER PTHR22935:SF81 1 174 3.6E-49 T 22-04-2016 TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 Gene3D G3DSA:3.30.1380.10 5 166 2.3E-56 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain TMO_RS17745 c0fcc184fc9edfff2531fc674b0f21e7 185 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 1 176 27.925 T 22-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 12 249 38.655 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 Pfam PF08241 Methyltransferase domain 71 166 5.0E-20 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 Gene3D G3DSA:3.40.50.150 25 233 1.5E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 PANTHER PTHR10108:SF902 9 248 8.5E-76 T 22-04-2016 TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 SUPERFAMILY SSF53335 17 249 7.03E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 14 242 6.3E-76 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 TMO_RS01900 7cd4e68793c069943c87dde5d22e9799 250 PANTHER PTHR10108 9 248 8.5E-76 T 22-04-2016 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 192 2.9E-32 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 SUPERFAMILY SSF53901 6 325 6.12E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 PANTHER PTHR18919:SF109 29 325 2.1E-130 T 22-04-2016 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 PANTHER PTHR18919 29 325 2.1E-130 T 22-04-2016 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 Gene3D G3DSA:3.40.47.10 5 163 4.0E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 325 73.132 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 325 3.9E-131 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 5.0E-37 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 TMO_RS09105 1bc43170503ec4435decd0bc84c76db6 325 Gene3D G3DSA:3.40.47.10 164 325 4.6E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 SUPERFAMILY SSF51905 6 165 3.37E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 SUPERFAMILY SSF51905 273 314 3.37E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Pfam PF01266 FAD dependent oxidoreductase 61 310 7.6E-9 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Pfam PF13450 NAD(P)-binding Rossmann-like domain 11 42 6.9E-5 T 22-04-2016 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Gene3D G3DSA:3.50.50.60 273 313 6.1E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12640 e0b9d55d3e777ae8ed0e299be5fc6a2e 315 Gene3D G3DSA:3.50.50.60 5 164 6.1E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 PANTHER PTHR11260 21 231 5.8E-64 T 22-04-2016 TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 Pfam PF02798 Glutathione S-transferase, N-terminal domain 22 99 1.3E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 145 222 4.2E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 SUPERFAMILY SSF47616 102 231 3.34E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 Gene3D G3DSA:3.40.30.10 9 101 1.0E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 PANTHER PTHR11260:SF178 21 231 5.8E-64 T 22-04-2016 TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 Gene3D G3DSA:1.20.1050.10 102 226 2.2E-37 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS07540 0c5316a74c70506517fe8c31d26d67c0 235 SUPERFAMILY SSF52833 11 102 1.47E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05410 a0247d3c07a64d8d3aa54512a64896a9 158 Gene3D G3DSA:1.20.120.340 8 124 8.3E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 TMO_RS05410 a0247d3c07a64d8d3aa54512a64896a9 158 Pfam PF02561 Flagellar protein FliS 10 121 2.2E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 TMO_RS05410 a0247d3c07a64d8d3aa54512a64896a9 158 SUPERFAMILY SSF101116 9 122 2.88E-31 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 TMO_RS05410 a0247d3c07a64d8d3aa54512a64896a9 158 PANTHER PTHR34773 1 143 6.7E-32 T 22-04-2016 TMO_RS05410 a0247d3c07a64d8d3aa54512a64896a9 158 TIGRFAM TIGR00208 fliS: flagellar protein FliS 8 120 1.8E-25 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 SUPERFAMILY SSF48498 78 191 1.64E-26 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 3.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.3E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.3E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 Gene3D G3DSA:1.10.357.10 74 193 7.6E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 Gene3D G3DSA:1.10.10.60 1 64 3.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 PANTHER PTHR30055:SF44 1 193 2.2E-40 T 22-04-2016 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 SUPERFAMILY SSF46689 1 66 9.23E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05755 08536f5a675256ceaebf2e92fc10e111 202 PANTHER PTHR30055 1 193 2.2E-40 T 22-04-2016 TMO_RS12725 f7a2f3954b327b697bc79c79de6f028e 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 425 1.1E-93 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS12725 f7a2f3954b327b697bc79c79de6f028e 431 PANTHER PTHR33362 8 430 7.1E-129 T 22-04-2016 TMO_RS12725 f7a2f3954b327b697bc79c79de6f028e 431 PANTHER PTHR33362:SF5 8 430 7.1E-129 T 22-04-2016 TMO_RS12725 f7a2f3954b327b697bc79c79de6f028e 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 420 8.0E-86 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS12725 f7a2f3954b327b697bc79c79de6f028e 431 PIRSF PIRSF006066 3 429 2.9E-90 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 SUPERFAMILY SSF54292 27 127 8.49E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 Gene3D G3DSA:3.10.20.30 22 127 2.2E-43 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS16520 ceb50915fe585989ae0c145204150079 257 Gene3D G3DSA:1.10.1060.10 128 255 1.1E-49 T 22-04-2016 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 Pfam PF13534 4Fe-4S dicluster domain 168 241 7.7E-9 T 22-04-2016 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 250 3.6E-85 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 29 132 7.4E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 SUPERFAMILY SSF46548 128 256 1.66E-37 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 PANTHER PTHR11921:SF27 11 257 9.1E-183 T 22-04-2016 TMO_RS16520 ceb50915fe585989ae0c145204150079 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 169 180 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS16520 ceb50915fe585989ae0c145204150079 257 PANTHER PTHR11921 11 257 9.1E-183 T 22-04-2016 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 SUPERFAMILY SSF52540 478 713 3.03E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Pfam PF03412 Peptidase C39 family 8 135 8.3E-33 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:3.90.70.10 15 134 1.9E-20 T 22-04-2016 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Pfam PF00664 ABC transporter transmembrane region 165 432 1.3E-10 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 SMART SM00382 508 692 2.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:1.20.1560.10 162 462 1.7E-37 T 22-04-2016 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Gene3D G3DSA:3.40.50.300 481 707 1.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 PANTHER PTHR24221 164 714 3.1E-112 T 22-04-2016 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 Pfam PF00005 ABC transporter 500 648 1.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07305 282c6d204806491d353918b39c3a43bc 716 SUPERFAMILY SSF90123 162 466 3.01E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PANTHER PTHR34186:SF2 1 157 1.6E-59 T 22-04-2016 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PIRSF PIRSF001263 7 157 5.6E-52 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 TIGRFAM TIGR00673 cynS: cyanase 18 157 1.3E-50 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PANTHER PTHR34186 1 157 1.6E-59 T 22-04-2016 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 SUPERFAMILY SSF47413 14 87 1.91E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 SUPERFAMILY SSF55234 90 157 1.57E-30 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 142 152 8.1E-28 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 25 40 8.1E-28 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 111 127 8.1E-28 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 45 62 8.1E-28 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 PRINTS PR01693 Cyanase signature 93 107 8.1E-28 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 Gene3D G3DSA:1.10.260.40 12 91 9.2E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 Hamap MF_00535 Cyanate hydratase [cynS]. 1 157 73.27 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 Pfam PF02560 Cyanate lyase C-terminal domain 89 155 5.1E-38 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 Gene3D G3DSA:3.30.1160.10 92 157 5.1E-38 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS01665 abcc168d344aa0fa27507404245b085a 157 SMART SM01116 85 157 6.3E-50 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 PANTHER PTHR11820 12 122 2.3E-77 T 22-04-2016 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 PANTHER PTHR11820 140 336 2.3E-77 T 22-04-2016 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 Gene3D G3DSA:3.90.850.10 88 334 3.1E-68 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 143 334 3.5E-59 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 SUPERFAMILY SSF56529 145 336 7.59E-64 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 PANTHER PTHR11820:SF88 12 122 2.3E-77 T 22-04-2016 TMO_RS10725 f78cf00a009b234c763616e68bbcedca 339 PANTHER PTHR11820:SF88 140 336 2.3E-77 T 22-04-2016 TMO_RS02170 e0f6c2ea139212f1900a2fbbe4fc36f3 233 PANTHER PTHR11080 1 224 8.0E-30 T 22-04-2016 TMO_RS02170 e0f6c2ea139212f1900a2fbbe4fc36f3 233 Gene3D G3DSA:3.40.50.850 20 226 3.9E-43 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS02170 e0f6c2ea139212f1900a2fbbe4fc36f3 233 SUPERFAMILY SSF52499 17 223 7.59E-42 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS02170 e0f6c2ea139212f1900a2fbbe4fc36f3 233 Pfam PF00857 Isochorismatase family 25 216 6.8E-28 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 PANTHER PTHR24220 5 321 2.2E-180 T 22-04-2016 TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.5E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 316 6.7E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 SMART SM00382 32 239 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 Gene3D G3DSA:3.40.50.300 2 255 2.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 PANTHER PTHR24220:SF576 5 321 2.2E-180 T 22-04-2016 TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 SUPERFAMILY SSF52540 3 252 1.62E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15200 07f85ad8453a62ad8dfeec438fd23eee 334 Pfam PF00005 ABC transporter 24 181 4.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 SUPERFAMILY SSF52833 4 86 2.38E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 PANTHER PTHR11260:SF192 153 236 1.4E-31 T 22-04-2016 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 PANTHER PTHR11260:SF192 1 131 1.4E-31 T 22-04-2016 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 6.9E-10 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 Gene3D G3DSA:3.40.30.10 3 87 9.1E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 SUPERFAMILY SSF47616 112 219 1.03E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 Pfam PF13410 Glutathione S-transferase, C-terminal domain 152 213 4.6E-12 T 22-04-2016 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 Gene3D G3DSA:1.20.1050.10 112 219 1.1E-11 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 PANTHER PTHR11260 153 236 1.4E-31 T 22-04-2016 TMO_RS07105 67ac46dca982e4cd8045144b2b7e4f2a 312 PANTHER PTHR11260 1 131 1.4E-31 T 22-04-2016 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 346 45.288 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 21 30 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 344 2.2E-111 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 PANTHER PTHR21091:SF2 18 344 4.7E-107 T 22-04-2016 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 8 344 1.5E-118 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 SUPERFAMILY SSF51726 5 346 3.53E-101 T 22-04-2016 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 Gene3D G3DSA:3.20.20.210 4 345 1.8E-125 T 22-04-2016 TMO_RS17150 59f7a5154b7b1f7cf92fd11dad03e2e3 350 PANTHER PTHR21091 18 344 4.7E-107 T 22-04-2016 TMO_RS15885 a386c4bb9505472e09f31ed1222525b1 255 PANTHER PTHR34148 1 255 9.7E-36 T 22-04-2016 TMO_RS15885 a386c4bb9505472e09f31ed1222525b1 255 PANTHER PTHR34148:SF1 1 255 9.7E-36 T 22-04-2016 TMO_RS15885 a386c4bb9505472e09f31ed1222525b1 255 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 255 40.822 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS15885 a386c4bb9505472e09f31ed1222525b1 255 Pfam PF02654 Cobalamin-5-phosphate synthase 4 245 1.7E-40 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 Gene3D G3DSA:3.30.565.10 327 481 1.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PANTHER PTHR24423:SF556 192 476 8.6E-49 T 22-04-2016 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PANTHER PTHR24423:SF556 1 8 8.6E-49 T 22-04-2016 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF55874 311 477 2.36E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 SMART SM00387 365 479 8.1E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PANTHER PTHR24423 192 476 8.6E-49 T 22-04-2016 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 PANTHER PTHR24423 1 8 8.6E-49 T 22-04-2016 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF47384 235 320 2.75E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 SUPERFAMILY SSF158472 202 249 5.23E-7 T 22-04-2016 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 SMART SM00304 198 251 1.5E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 Gene3D G3DSA:1.10.287.130 242 316 4.3E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 476 1.0E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13355 643ecc7113dcb253f3d8b18481c80d0f 498 Pfam PF00672 HAMP domain 179 247 2.1E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS06195 0f46382d283d5ac8a224e4c513b6c827 393 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 274 347 6.6E-21 T 22-04-2016 IPR018905 Alpha-galactosidase, NEW3 domain TMO_RS06195 0f46382d283d5ac8a224e4c513b6c827 393 PANTHER PTHR39198 5 393 4.1E-42 T 22-04-2016 TMO_RS06195 0f46382d283d5ac8a224e4c513b6c827 393 Gene3D G3DSA:2.60.40.10 44 138 4.5E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold TMO_RS06195 0f46382d283d5ac8a224e4c513b6c827 393 Gene3D G3DSA:2.60.40.10 272 363 2.9E-17 T 22-04-2016 IPR013783 Immunoglobulin-like fold TMO_RS10625 87303a109a71109ae537fe840cf978a4 310 Pfam PF00892 EamA-like transporter family 172 306 6.7E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS10625 87303a109a71109ae537fe840cf978a4 310 Pfam PF00892 EamA-like transporter family 25 157 1.3E-26 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS10625 87303a109a71109ae537fe840cf978a4 310 PANTHER PTHR12715 26 309 1.1E-62 T 22-04-2016 TMO_RS10625 87303a109a71109ae537fe840cf978a4 310 SUPERFAMILY SSF103481 60 159 5.23E-14 T 22-04-2016 TMO_RS10625 87303a109a71109ae537fe840cf978a4 310 SUPERFAMILY SSF103481 213 308 3.79E-13 T 22-04-2016 TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 PANTHER PTHR33375:SF2 1 698 1.1E-250 T 22-04-2016 TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 Pfam PF02195 ParB-like nuclease domain 16 117 4.2E-9 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 Gene3D G3DSA:3.90.1530.10 14 123 6.0E-13 T 22-04-2016 TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 SUPERFAMILY SSF110849 15 120 5.41E-13 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 SMART SM00470 14 118 3.8E-9 T 22-04-2016 IPR003115 ParB/Sulfiredoxin TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 SUPERFAMILY SSF109709 111 206 1.57E-21 T 22-04-2016 TMO_RS11215 cc9fa08e831db5c895d1b9cf0881f87d 718 PANTHER PTHR33375 1 698 1.1E-250 T 22-04-2016 TMO_RS06970 da617d8f49a2a93556178293176aec4a 156 Pfam PF01475 Ferric uptake regulator family 21 139 2.3E-13 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_RS06970 da617d8f49a2a93556178293176aec4a 156 SUPERFAMILY SSF46785 14 144 1.52E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06970 da617d8f49a2a93556178293176aec4a 156 PANTHER PTHR33202:SF6 1 146 4.7E-63 T 22-04-2016 TMO_RS06970 da617d8f49a2a93556178293176aec4a 156 PANTHER PTHR33202 1 146 4.7E-63 T 22-04-2016 TMO_RS06970 da617d8f49a2a93556178293176aec4a 156 Gene3D G3DSA:1.10.10.10 13 82 1.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02465 217c9c55318517aedab948a0fa1b84bc 172 SUPERFAMILY SSF52121 20 163 1.31E-41 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS02465 217c9c55318517aedab948a0fa1b84bc 172 PANTHER PTHR21058 21 125 6.5E-29 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS02465 217c9c55318517aedab948a0fa1b84bc 172 Gene3D G3DSA:3.40.50.960 20 162 9.8E-43 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS02465 217c9c55318517aedab948a0fa1b84bc 172 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 21 156 1.6E-35 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS02465 217c9c55318517aedab948a0fa1b84bc 172 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 15 163 22.331 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 SUPERFAMILY SSF51735 7 331 7.04E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 PANTHER PTHR13812:SF19 6 334 4.2E-26 T 22-04-2016 TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 8 332 2.4E-118 T 22-04-2016 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 Gene3D G3DSA:3.40.50.720 149 295 4.7E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 PIRSF PIRSF001439 3 332 4.1E-58 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 PANTHER PTHR13812 6 334 4.2E-26 T 22-04-2016 TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 Gene3D G3DSA:3.30.1780.10 7 148 4.8E-37 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal TMO_RS11830 4aab68cbb2015c3f61c201bfd9f62149 341 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 49 316 1.0E-26 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin TMO_RS23380 e64d30bcdb54c597f9d4bee5d836fb0b 382 Gene3D G3DSA:3.40.50.880 138 362 1.5E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS23380 e64d30bcdb54c597f9d4bee5d836fb0b 382 PANTHER PTHR11019:SF58 94 382 5.9E-49 T 22-04-2016 TMO_RS23380 e64d30bcdb54c597f9d4bee5d836fb0b 382 PANTHER PTHR11019 94 382 5.9E-49 T 22-04-2016 TMO_RS23380 e64d30bcdb54c597f9d4bee5d836fb0b 382 SUPERFAMILY SSF52317 138 328 6.11E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS23380 e64d30bcdb54c597f9d4bee5d836fb0b 382 Pfam PF01965 DJ-1/PfpI family 138 309 2.8E-28 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 255 275 7.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 67 81 7.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 PRINTS PR00474 Glutamate 5-kinase family signature 205 232 7.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 Gene3D G3DSA:3.40.1160.10 35 304 1.0E-104 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 Pfam PF00696 Amino acid kinase family 37 280 2.5E-49 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 37 280 2.7E-76 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 Hamap MF_00082_B Acetylglutamate kinase [argB]. 34 305 36.464 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 PANTHER PTHR23342 16 303 6.2E-108 T 22-04-2016 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 PIRSF PIRSF000728 19 305 5.9E-108 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 TMO_RS13665 69cfcd6f991875c5f6f940c8f98d26cd 305 SUPERFAMILY SSF53633 14 304 1.31E-92 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 SMART SM01400 1 117 8.1E-79 T 22-04-2016 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 310 48.457 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 PANTHER PTHR10210:SF41 1 310 6.4E-173 T 22-04-2016 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 309 8.0E-22 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 Gene3D G3DSA:3.40.50.2020 1 155 7.6E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 Gene3D G3DSA:3.40.50.2020 156 280 1.9E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 PANTHER PTHR10210 1 310 6.4E-173 T 22-04-2016 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 310 2.3E-115 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 6.7E-48 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 TMO_RS01590 143c5f01814e16357b78a447b2c58a53 310 SUPERFAMILY SSF53271 66 300 2.67E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS16690 f0e7903773a064ec95bc7ec2c1e5c2fe 223 Gene3D G3DSA:3.40.50.1820 3 221 3.9E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16690 f0e7903773a064ec95bc7ec2c1e5c2fe 223 PANTHER PTHR10655 4 222 2.2E-20 T 22-04-2016 TMO_RS16690 f0e7903773a064ec95bc7ec2c1e5c2fe 223 Pfam PF02230 Phospholipase/Carboxylesterase 2 220 1.1E-20 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_RS16690 f0e7903773a064ec95bc7ec2c1e5c2fe 223 SUPERFAMILY SSF53474 3 222 1.05E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01720 035101a302a6ff81608963aa3717465b 329 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 11 42 3.1E-19 T 22-04-2016 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS01720 035101a302a6ff81608963aa3717465b 329 Gene3D G3DSA:3.40.50.300 58 231 3.2E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01720 035101a302a6ff81608963aa3717465b 329 SUPERFAMILY SSF52540 40 286 1.68E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01720 035101a302a6ff81608963aa3717465b 329 Pfam PF07728 AAA domain (dynein-related subfamily) 69 191 5.1E-12 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 TMO_RS01720 035101a302a6ff81608963aa3717465b 329 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 12 320 1.5E-173 T 22-04-2016 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:3.30.470.20 203 445 3.5E-102 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.0E-84 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.4E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 SMART SM00878 336 442 3.1E-61 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:3.40.50.20 1 129 3.3E-53 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 PANTHER PTHR18866 1 566 0.0 T 22-04-2016 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 PANTHER PTHR18866 582 660 0.0 T 22-04-2016 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF52440 1 113 5.61E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF51230 581 660 1.31E-19 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF56059 83 348 5.83E-74 T 22-04-2016 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 SUPERFAMILY SSF51246 331 445 1.05E-42 T 22-04-2016 IPR011054 Rudiment single hybrid motif TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:3.30.1490.20 130 202 1.3E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF00364 Biotin-requiring enzyme 596 658 7.1E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 616 633 - T 22-04-2016 IPR001882 Biotin-binding site TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Gene3D G3DSA:2.40.50.100 592 660 1.4E-21 T 22-04-2016 TMO_RS13085 3f35e5cc847f4a4d5316677495ae9f27 660 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 4.9E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 PANTHER PTHR12418:SF27 17 139 2.8E-15 T 22-04-2016 TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 Pfam PF03061 Thioesterase superfamily 54 130 5.2E-12 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 SUPERFAMILY SSF54637 7 138 1.29E-23 T 22-04-2016 IPR029069 HotDog domain TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 137 1.4E-17 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 PANTHER PTHR12418 17 139 2.8E-15 T 22-04-2016 TMO_RS15280 9532ecb80ddd67dc4ad0769804ccf3ee 140 Gene3D G3DSA:3.10.129.10 11 139 2.2E-29 T 22-04-2016 IPR029069 HotDog domain TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 PANTHER PTHR21327:SF6 2 371 1.3E-132 T 22-04-2016 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 SUPERFAMILY SSF55821 11 213 4.35E-82 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 Gene3D G3DSA:3.90.870.10 13 220 6.2E-93 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 PANTHER PTHR21327 2 371 1.3E-132 T 22-04-2016 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 36.283 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 PIRSF PIRSF001259 12 375 4.1E-111 T 22-04-2016 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 Pfam PF00925 GTP cyclohydrolase II 217 366 6.3E-27 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 208 1.5E-80 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 SUPERFAMILY SSF142695 216 370 4.45E-35 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS10245 fab17fc9f6cd18d2d27d5590252eb8bf 376 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 209 4.5E-68 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 Gene3D G3DSA:3.40.190.10 55 140 2.1E-15 T 22-04-2016 TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 Gene3D G3DSA:1.10.10.10 2 40 2.8E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 SUPERFAMILY SSF53850 52 246 2.53E-31 T 22-04-2016 TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 PANTHER PTHR30579 1 257 2.8E-38 T 22-04-2016 TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 Pfam PF03466 LysR substrate binding domain 51 243 6.0E-28 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 SUPERFAMILY SSF46785 1 75 1.54E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS20520 c06eb5291b92495d5bd894239958f354 260 PANTHER PTHR30579:SF3 1 257 2.8E-38 T 22-04-2016 TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 Gene3D G3DSA:3.40.30.10 37 196 3.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 SUPERFAMILY SSF52833 36 196 1.2E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 Pfam PF08534 Redoxin 38 192 1.8E-21 T 22-04-2016 IPR013740 Redoxin GO:0016491 TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 PANTHER PTHR10681 36 71 1.2E-49 T 22-04-2016 TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 PANTHER PTHR10681 87 196 1.2E-49 T 22-04-2016 TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 PANTHER PTHR10681:SF112 36 71 1.2E-49 T 22-04-2016 TMO_RS03115 e288c86028a237727c223aeba0aedac8 198 PANTHER PTHR10681:SF112 87 196 1.2E-49 T 22-04-2016 TMO_RS01455 776a2fd90d0cb12eeda9c080692e69af 380 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 55 338 8.7E-26 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS01455 776a2fd90d0cb12eeda9c080692e69af 380 PANTHER PTHR33376 8 362 1.2E-32 T 22-04-2016 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 Pfam PF08281 Sigma-70, region 4 23 55 8.1E-7 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 SUPERFAMILY SSF88659 16 57 2.88E-7 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 Gene3D G3DSA:3.40.50.1360 67 323 2.3E-66 T 22-04-2016 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 SUPERFAMILY SSF100950 74 323 9.07E-58 T 22-04-2016 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 Gene3D G3DSA:1.10.10.10 23 55 3.9E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 PANTHER PTHR34294 19 329 1.9E-67 T 22-04-2016 TMO_RS06505 01bc51b1c5db2e82e8095ac2225d5785 335 Pfam PF04198 Putative sugar-binding domain 70 323 1.3E-56 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 TMO_RS17300 8033a75018ca6809ba9d5be857f715cd 262 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 130 152 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_RS17300 8033a75018ca6809ba9d5be857f715cd 262 Pfam PF01066 CDP-alcohol phosphatidyltransferase 78 150 1.2E-9 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 SUPERFAMILY SSF53639 45 264 1.47E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 Gene3D G3DSA:3.40.225.10 48 258 1.3E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 PANTHER PTHR10672:SF17 33 276 3.5E-132 T 22-04-2016 TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 52 232 2.1E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 SMART SM01007 52 232 2.6E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS01210 9eb179c6bcd435a6fa82a130a76f4075 281 PANTHER PTHR10672 33 276 3.5E-132 T 22-04-2016 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 Pfam PF01266 FAD dependent oxidoreductase 20 370 3.7E-39 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 SUPERFAMILY SSF51905 19 247 7.25E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 SUPERFAMILY SSF51905 360 425 7.25E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 SUPERFAMILY SSF51905 282 308 7.25E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 8.5E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 93 105 8.5E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 397 409 8.5E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 361 367 8.5E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 8.5E-16 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 430 554 2.2E-18 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PANTHER PTHR11985:SF1 125 566 5.0E-100 T 22-04-2016 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PANTHER PTHR11985:SF1 1 106 5.0E-100 T 22-04-2016 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:3.50.50.60 403 425 3.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:3.50.50.60 166 321 3.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 Gene3D G3DSA:3.50.50.60 19 115 3.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PANTHER PTHR11985 125 566 5.0E-100 T 22-04-2016 TMO_RS06510 aaf1682f4da1ffaebf2b832a73aab891 588 PANTHER PTHR11985 1 106 5.0E-100 T 22-04-2016 TMO_RS29530 80981bb39f5fb6cdc78ba51a199fc52a 436 PANTHER PTHR30105 157 402 8.0E-46 T 22-04-2016 TMO_RS29530 80981bb39f5fb6cdc78ba51a199fc52a 436 SUPERFAMILY SSF88713 167 384 1.67E-53 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS29530 80981bb39f5fb6cdc78ba51a199fc52a 436 Pfam PF04748 Divergent polysaccharide deacetylase 172 384 1.7E-59 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ TMO_RS29530 80981bb39f5fb6cdc78ba51a199fc52a 436 Gene3D G3DSA:3.20.20.370 156 388 1.5E-63 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_RS13420 590646bf10b9c6a9310b70bc80c2252c 146 SUPERFAMILY SSF54427 9 137 8.25E-19 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS13420 590646bf10b9c6a9310b70bc80c2252c 146 Gene3D G3DSA:3.10.450.50 5 136 1.4E-12 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS13420 590646bf10b9c6a9310b70bc80c2252c 146 Pfam PF12680 SnoaL-like domain 15 113 1.1E-12 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain TMO_RS06655 f5ef9ebcda826ef9ac61a850c24d28c0 158 PANTHER PTHR23091 3 148 1.5E-14 T 22-04-2016 TMO_RS06655 f5ef9ebcda826ef9ac61a850c24d28c0 158 Pfam PF00583 Acetyltransferase (GNAT) family 60 132 6.3E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS06655 f5ef9ebcda826ef9ac61a850c24d28c0 158 Gene3D G3DSA:3.40.630.30 2 146 1.4E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS06655 f5ef9ebcda826ef9ac61a850c24d28c0 158 SUPERFAMILY SSF55729 3 136 1.41E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 Pfam PF13641 Glycosyltransferase like family 2 438 667 3.5E-42 T 22-04-2016 TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 SUPERFAMILY SSF51445 55 317 3.56E-51 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 Gene3D G3DSA:3.90.550.10 438 683 6.1E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 Pfam PF00332 Glycosyl hydrolases family 17 240 317 9.3E-10 T 22-04-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 PANTHER PTHR16631 56 327 3.1E-64 T 22-04-2016 TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 Gene3D G3DSA:3.20.20.80 71 318 2.3E-36 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 TMO_RS06765 75c1b776517e81733b8e9cfd735b02d8 892 SUPERFAMILY SSF53448 435 689 4.84E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS05215 c7f3c8d27055a9fcbb059d214b8861aa 240 Gene3D G3DSA:3.90.870.10 8 213 3.8E-42 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS05215 c7f3c8d27055a9fcbb059d214b8861aa 240 SUPERFAMILY SSF55821 4 214 8.55E-38 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS05215 c7f3c8d27055a9fcbb059d214b8861aa 240 PANTHER PTHR17490 11 232 2.5E-30 T 22-04-2016 TMO_RS05215 c7f3c8d27055a9fcbb059d214b8861aa 240 Pfam PF01300 Telomere recombination 17 184 4.3E-32 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 7.2E-4 T 22-04-2016 TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 Gene3D G3DSA:3.40.50.720 1 274 2.1E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 6.3E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 272 5.5E-51 T 22-04-2016 TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PANTHER PTHR24322 165 196 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 PANTHER PTHR24322 11 141 1.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04915 cc1219b45e496f1aff64be8b2727d9f1 275 SUPERFAMILY SSF51735 5 274 9.02E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 PANTHER PTHR20863 3 76 4.6E-31 T 22-04-2016 TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 Gene3D G3DSA:1.10.1200.10 3 77 2.3E-34 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 Pfam PF00550 Phosphopantetheine attachment site 6 72 3.9E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 SUPERFAMILY SSF47336 2 77 1.31E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.7E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 75 2.0E-12 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0063 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site TMO_RS09375 dbc37435cc085cb05393cab4b6427bce 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 TMO_RS10670 fd84e6d2f7080e7eaff1a49046bb4b5d 232 PANTHER PTHR18895 61 193 2.1E-24 T 22-04-2016 TMO_RS10670 fd84e6d2f7080e7eaff1a49046bb4b5d 232 Gene3D G3DSA:3.40.50.150 50 201 4.2E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS10670 fd84e6d2f7080e7eaff1a49046bb4b5d 232 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 85 137 3.0E-11 T 22-04-2016 TMO_RS10670 fd84e6d2f7080e7eaff1a49046bb4b5d 232 PANTHER PTHR18895:SF3 61 193 2.1E-24 T 22-04-2016 TMO_RS10670 fd84e6d2f7080e7eaff1a49046bb4b5d 232 SUPERFAMILY SSF53335 56 195 3.86E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 Pfam PF00673 ribosomal L5P family C-terminus 85 177 5.3E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 Gene3D G3DSA:3.30.1440.10 1 177 3.3E-77 T 22-04-2016 IPR022803 Ribosomal protein L5 domain TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.384 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 PIRSF PIRSF002161 1 179 3.8E-64 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 PANTHER PTHR11994 1 177 1.4E-90 T 22-04-2016 TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 Pfam PF00281 Ribosomal protein L5 24 80 5.4E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal TMO_RS13195 58b8738d6a47d23c18fd972b3a42e120 179 SUPERFAMILY SSF55282 3 178 3.06E-76 T 22-04-2016 IPR022803 Ribosomal protein L5 domain TMO_RS07680 5102bdb8e83b8bd29e5f9ae8c35fd416 149 Pfam PF13581 Histidine kinase-like ATPase domain 10 140 3.2E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07680 5102bdb8e83b8bd29e5f9ae8c35fd416 149 Gene3D G3DSA:3.30.565.10 33 132 8.7E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS07680 5102bdb8e83b8bd29e5f9ae8c35fd416 149 SUPERFAMILY SSF55874 25 133 1.67E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF55257 16 60 5.63E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF55257 152 236 5.63E-28 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:2.170.120.12 71 176 9.7E-43 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 65 158 2.5E-19 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 32 227 5.9E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 SMART SM00662 26 233 7.8E-82 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF56553 56 177 3.45E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 27 317 1.7E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:1.10.150.20 247 329 2.3E-37 T 22-04-2016 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 PANTHER PTHR32108 5 331 2.0E-133 T 22-04-2016 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 6 318 35.653 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Gene3D G3DSA:3.30.1360.10 15 70 7.4E-9 T 22-04-2016 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 SUPERFAMILY SSF47789 251 327 1.57E-26 T 22-04-2016 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 309 2.1E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 258 329 7.0E-32 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13135 dc3f9df5b79902a2905903b9a2101dfd 338 PANTHER PTHR32108:SF0 5 331 2.0E-133 T 22-04-2016 TMO_RS04790 31665d1ba4f89813f6f2ad467919a381 293 SMART SM00382 32 190 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04790 31665d1ba4f89813f6f2ad467919a381 293 PANTHER PTHR22908 10 240 1.8E-69 T 22-04-2016 TMO_RS04790 31665d1ba4f89813f6f2ad467919a381 293 SUPERFAMILY SSF52540 14 253 2.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04790 31665d1ba4f89813f6f2ad467919a381 293 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 36 181 4.6E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS04790 31665d1ba4f89813f6f2ad467919a381 293 Gene3D G3DSA:3.40.50.300 15 205 2.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 Gene3D G3DSA:1.10.10.60 264 309 1.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 PANTHER PTHR11019 207 317 5.7E-30 T 22-04-2016 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 PANTHER PTHR11019:SF61 207 317 5.7E-30 T 22-04-2016 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 262 303 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 Gene3D G3DSA:1.10.10.60 206 263 2.0E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 SUPERFAMILY SSF46689 262 311 2.69E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 SMART SM00342 225 307 5.3E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 Pfam PF12833 Helix-turn-helix domain 231 308 3.4E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 8.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS01330 8ddf9039386927c56a3fa34e681fdaeb 328 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 8.7E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 Gene3D G3DSA:3.40.640.10 46 265 1.5E-55 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 PANTHER PTHR11751:SF354 13 399 2.3E-85 T 22-04-2016 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 Gene3D G3DSA:3.90.1150.10 266 401 6.2E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 SUPERFAMILY SSF53383 2 401 1.41E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 PANTHER PTHR11751 13 399 2.3E-85 T 22-04-2016 TMO_RS15820 a3259f8050b69d596ba6dfc44eca59a8 403 Pfam PF00155 Aminotransferase class I and II 52 365 1.3E-36 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 Gene3D G3DSA:3.40.50.1980 173 297 4.5E-24 T 22-04-2016 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 Pfam PF01497 Periplasmic binding protein 38 278 4.2E-22 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 SUPERFAMILY SSF53807 34 297 4.32E-38 T 22-04-2016 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 PANTHER PTHR30535 34 297 1.7E-32 T 22-04-2016 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 PANTHER PTHR30535:SF7 34 297 1.7E-32 T 22-04-2016 TMO_RS13930 c726e6fe42d4654b488c047f119aaef5 320 Gene3D G3DSA:3.40.50.1980 34 169 1.4E-12 T 22-04-2016 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 Pfam PF03150 Di-haem cytochrome c peroxidase 51 200 2.9E-50 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 PIRSF PIRSF000294 1 344 9.9E-148 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 Gene3D G3DSA:1.10.760.10 46 191 1.5E-50 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 Gene3D G3DSA:1.10.760.10 192 329 9.1E-43 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 Pfam PF00034 Cytochrome c 209 321 3.0E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 PANTHER PTHR30600:SF7 42 331 1.9E-113 T 22-04-2016 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 SUPERFAMILY SSF46626 32 188 2.83E-53 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 SUPERFAMILY SSF46626 187 341 3.81E-43 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06330 c1b8814ded9d62a8b5957264f8f31eb0 344 PANTHER PTHR30600 42 331 1.9E-113 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 1.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 1.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 433 1.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 483 512 1.3E-22 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 SMART SM00283 308 562 1.4E-45 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089 166 173 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089 286 565 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089 192 254 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 SMART SM00304 219 272 1.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 Pfam PF00672 HAMP domain 199 264 1.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089:SF40 166 173 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089:SF40 286 565 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 PANTHER PTHR32089:SF40 192 254 9.5E-122 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 379 561 2.1E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 Gene3D G3DSA:1.10.287.950 328 532 5.2E-48 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 SUPERFAMILY SSF58104 247 274 5.75E-61 T 22-04-2016 TMO_RS07915 c8b54705ac62beb2c97a799685c7cbbc 573 SUPERFAMILY SSF58104 314 561 5.75E-61 T 22-04-2016 TMO_RS10225 14f778a281152067784d7422826bc7fb 256 Gene3D G3DSA:3.40.50.10310 6 251 2.3E-65 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 TMO_RS10225 14f778a281152067784d7422826bc7fb 256 PANTHER PTHR35005 2 248 1.6E-35 T 22-04-2016 TMO_RS10225 14f778a281152067784d7422826bc7fb 256 SUPERFAMILY SSF102215 8 248 1.96E-59 T 22-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 TMO_RS10225 14f778a281152067784d7422826bc7fb 256 Pfam PF02633 Creatinine amidohydrolase 12 247 4.5E-56 T 22-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 TMO_RS10225 14f778a281152067784d7422826bc7fb 256 PANTHER PTHR35005:SF1 2 248 1.6E-35 T 22-04-2016 TMO_RS11420 0b567b7c35b693f3ed8b7275150b64c9 304 PANTHER PTHR30273 2 304 7.7E-40 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS11420 0b567b7c35b693f3ed8b7275150b64c9 304 Pfam PF16220 Domain of unknown function (DUF4880) 2 41 9.6E-13 T 22-04-2016 IPR032623 FecR, N-terminal TMO_RS11420 0b567b7c35b693f3ed8b7275150b64c9 304 PIRSF PIRSF018266 1 302 3.0E-75 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS11420 0b567b7c35b693f3ed8b7275150b64c9 304 Pfam PF04773 FecR protein 98 189 1.6E-19 T 22-04-2016 IPR006860 FecR protein TMO_RS04600 7ba1b36ff7d76e855d9a7969804ff047 279 Gene3D G3DSA:3.40.1190.20 10 183 5.6E-32 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS04600 7ba1b36ff7d76e855d9a7969804ff047 279 Pfam PF08543 Phosphomethylpyrimidine kinase 20 244 4.5E-30 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 TMO_RS04600 7ba1b36ff7d76e855d9a7969804ff047 279 SUPERFAMILY SSF53613 10 187 5.67E-27 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS04600 7ba1b36ff7d76e855d9a7969804ff047 279 PANTHER PTHR20858:SF17 1 180 7.7E-17 T 22-04-2016 TMO_RS04600 7ba1b36ff7d76e855d9a7969804ff047 279 PANTHER PTHR20858 1 180 7.7E-17 T 22-04-2016 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 SMART SM01091 345 423 1.1E-24 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 PANTHER PTHR22777 1 427 1.3E-135 T 22-04-2016 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF01595 Domain of unknown function DUF21 10 179 1.8E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Gene3D G3DSA:3.30.465.10 324 421 4.9E-25 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 SUPERFAMILY SSF56176 345 426 5.45E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF00571 CBS domain 207 264 0.0036 T 22-04-2016 IPR000644 CBS domain TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF00571 CBS domain 285 330 9.7E-6 T 22-04-2016 IPR000644 CBS domain TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Pfam PF03471 Transporter associated domain 347 421 1.7E-18 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 Gene3D G3DSA:3.10.580.10 193 323 1.3E-18 T 22-04-2016 TMO_RS01755 c67770a2c05c6047dd8703d7c812178a 437 SUPERFAMILY SSF54631 202 344 8.29E-32 T 22-04-2016 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 Gene3D G3DSA:3.40.50.2300 1 118 2.9E-33 T 22-04-2016 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 SUPERFAMILY SSF52172 1 175 2.79E-34 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 Gene3D G3DSA:1.10.10.10 123 221 3.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 Pfam PF00072 Response regulator receiver domain 3 112 6.5E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 PANTHER PTHR26402:SF578 1 221 3.3E-89 T 22-04-2016 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.2E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 SMART SM00448 1 112 3.2E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 SMART SM00862 146 221 2.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS13360 7cb787bfc4492cf2f7f3ccf9eae67597 238 PANTHER PTHR26402 1 221 3.3E-89 T 22-04-2016 TMO_RS08315 0de2263c0fbe96c16b341e2be0c2a606 247 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 198 9.011 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 SUPERFAMILY SSF52540 6 211 3.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 PANTHER PTHR24220 7 202 1.3E-54 T 22-04-2016 TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 Pfam PF00005 ABC transporter 22 158 2.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 SMART SM00382 30 207 1.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS12455 d4ae2358203bef59b2436615e690c916 243 Gene3D G3DSA:3.40.50.300 2 203 5.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 PANTHER PTHR30290 20 525 6.1E-219 T 22-04-2016 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 Gene3D G3DSA:3.10.105.10 285 500 5.6E-68 T 22-04-2016 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 PIRSF PIRSF002741 8 527 1.7E-120 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 SUPERFAMILY SSF53850 25 526 2.71E-158 T 22-04-2016 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 PANTHER PTHR30290:SF14 20 525 6.1E-219 T 22-04-2016 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 Gene3D G3DSA:3.90.76.10 34 214 6.8E-49 T 22-04-2016 TMO_RS15215 ad2cbee0ce1c23fa72afeb42533ed016 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 449 2.3E-105 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS06050 1e26273f84da11a9291c9ad934b8f0bb 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 7 102 2.1E-5 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS06050 1e26273f84da11a9291c9ad934b8f0bb 117 Gene3D G3DSA:3.30.160.100 7 103 4.1E-7 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS06050 1e26273f84da11a9291c9ad934b8f0bb 117 SUPERFAMILY SSF69754 7 101 2.09E-8 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 Gene3D G3DSA:1.20.5.710 7 50 4.0E-16 T 22-04-2016 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 106 5.0E-17 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 Gene3D G3DSA:3.30.1390.10 53 125 2.2E-36 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 SUPERFAMILY SSF54736 54 125 1.36E-26 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 7.9E-49 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 125 25.582 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 PANTHER PTHR24089:SF272 5 122 1.8E-16 T 22-04-2016 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 50 1.0E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 SUPERFAMILY SSF48300 4 61 1.14E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 PANTHER PTHR24089 5 122 1.8E-16 T 22-04-2016 TMO_RS13300 a367b8cab36763a5f894adbfed8b37d9 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.3E-32 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 TIGRFAM TIGR00115 tig: trigger factor 11 418 7.4E-137 T 22-04-2016 IPR005215 Trigger factor GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:3.10.50.40 157 217 7.1E-9 T 22-04-2016 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 PANTHER PTHR30560:SF3 1 436 5.0E-115 T 22-04-2016 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF109998 249 435 1.15E-45 T 22-04-2016 IPR027304 Trigger factor/SurA domain TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:3.30.70.1050 1 118 2.7E-38 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Hamap MF_00303 Trigger factor [tig]. 1 424 22.609 T 22-04-2016 IPR005215 Trigger factor GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Gene3D G3DSA:1.10.3120.10 218 394 1.5E-50 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF102735 1 129 1.31E-38 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 234 2.9E-15 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 418 2.6E-42 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 PANTHER PTHR30560 1 436 5.0E-115 T 22-04-2016 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.2E-42 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 PIRSF PIRSF003095 1 440 1.3E-134 T 22-04-2016 IPR005215 Trigger factor GO:0015031 TMO_RS09985 c08e893e60aa5e6879ed1a054c22d708 452 SUPERFAMILY SSF54534 88 242 1.37E-37 T 22-04-2016 TMO_RS03980 1cfafe9f3741e0831e94619b1f2c5636 408 Pfam PF03600 Citrate transporter 28 352 1.2E-24 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 TMO_RS03980 1cfafe9f3741e0831e94619b1f2c5636 408 PANTHER PTHR10283 21 396 4.7E-56 T 22-04-2016 TMO_RS03980 1cfafe9f3741e0831e94619b1f2c5636 408 PANTHER PTHR10283:SF95 21 396 4.7E-56 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 PANTHER PTHR30290 1 550 1.1E-139 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.40.190.10 207 309 8.7E-29 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 441 1.5E-78 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 PIRSF PIRSF002741 6 550 1.1E-100 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.10.105.10 310 518 2.4E-45 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 Gene3D G3DSA:3.90.76.10 54 206 2.3E-33 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 PANTHER PTHR30290:SF9 1 550 1.1E-139 T 22-04-2016 TMO_RS05190 b20e4859f61416ceee6fe89ab10be221 552 SUPERFAMILY SSF53850 41 550 1.3E-124 T 22-04-2016 TMO_RS17450 63309604c2acb999bbc494e79fe334e3 207 Pfam PF04972 BON domain 56 124 2.7E-11 T 22-04-2016 IPR007055 BON domain TMO_RS17450 63309604c2acb999bbc494e79fe334e3 207 Pfam PF04972 BON domain 135 201 1.4E-16 T 22-04-2016 IPR007055 BON domain TMO_RS17450 63309604c2acb999bbc494e79fe334e3 207 SMART SM00749 139 202 4.7E-8 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria TMO_RS17450 63309604c2acb999bbc494e79fe334e3 207 PANTHER PTHR34606 26 195 2.2E-29 T 22-04-2016 TMO_RS17450 63309604c2acb999bbc494e79fe334e3 207 PANTHER PTHR34606:SF4 26 195 2.2E-29 T 22-04-2016 TMO_RS11310 ed3e735fc2a1215db48c556db3fa0002 88 Pfam PF03713 Domain of unknown function (DUF305) 6 83 7.9E-19 T 22-04-2016 IPR005183 Domain of unknown function DUF305 TMO_RS11310 ed3e735fc2a1215db48c556db3fa0002 88 SUPERFAMILY SSF47240 12 85 1.44E-5 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS11310 ed3e735fc2a1215db48c556db3fa0002 88 Gene3D G3DSA:1.20.1260.10 9 84 1.4E-24 T 22-04-2016 IPR012347 Ferritin-related TMO_RS11310 ed3e735fc2a1215db48c556db3fa0002 88 PANTHER PTHR36933:SF1 2 84 8.9E-20 T 22-04-2016 TMO_RS11310 ed3e735fc2a1215db48c556db3fa0002 88 PANTHER PTHR36933 2 84 8.9E-20 T 22-04-2016 TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 SUPERFAMILY SSF75217 123 275 8.5E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 PANTHER PTHR12029 24 273 5.5E-60 T 22-04-2016 TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 SMART SM00967 41 118 1.7E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 Gene3D G3DSA:3.30.1330.30 41 114 1.7E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 SUPERFAMILY SSF55315 38 114 7.89E-14 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 Gene3D G3DSA:3.40.1280.10 129 275 9.1E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 42 116 6.9E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 Pfam PF00588 SpoU rRNA Methylase family 133 273 8.2E-38 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_RS13350 ef5ba04bb31e0d245b48a135ca20e730 284 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 42 275 5.5E-56 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 TMO_RS10990 6f5a9fb994b3e3adc39a0fdeb742556f 124 PANTHER PTHR33204:SF6 1 113 2.6E-36 T 22-04-2016 TMO_RS10990 6f5a9fb994b3e3adc39a0fdeb742556f 124 SUPERFAMILY SSF46785 11 113 9.89E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10990 6f5a9fb994b3e3adc39a0fdeb742556f 124 Pfam PF01638 HxlR-like helix-turn-helix 22 110 1.2E-29 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type TMO_RS10990 6f5a9fb994b3e3adc39a0fdeb742556f 124 PANTHER PTHR33204 1 113 2.6E-36 T 22-04-2016 TMO_RS10990 6f5a9fb994b3e3adc39a0fdeb742556f 124 Gene3D G3DSA:1.10.10.10 8 116 2.7E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.40.190.10 109 207 7.1E-10 T 22-04-2016 TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 239 2.0E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 PANTHER PTHR10799 313 446 4.7E-22 T 22-04-2016 TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.30.70.270 296 454 7.1E-49 T 22-04-2016 TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SMART SM00062 31 252 8.3E-20 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SUPERFAMILY SSF53850 25 251 1.69E-42 T 22-04-2016 TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 448 2.3E-42 T 22-04-2016 IPR000160 GGDEF domain TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SMART SM00267 283 450 3.0E-57 T 22-04-2016 IPR000160 GGDEF domain TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 446 8.8E-41 T 22-04-2016 IPR000160 GGDEF domain TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 SUPERFAMILY SSF55073 299 451 2.51E-43 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.40.190.10 212 251 2.4E-18 T 22-04-2016 TMO_RS08380 3ee4d6c1e7780f204cfc08f4294d9cc9 463 Gene3D G3DSA:3.40.190.10 29 108 2.4E-18 T 22-04-2016 TMO_RS16385 1666927b2872d935a79ff97492872524 193 PANTHER PTHR33692 18 192 6.5E-42 T 22-04-2016 TMO_RS16385 1666927b2872d935a79ff97492872524 193 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 29 192 2.5E-38 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TMO_RS16385 1666927b2872d935a79ff97492872524 193 SUPERFAMILY SSF50346 121 192 2.46E-18 T 22-04-2016 IPR011033 PRC-barrel-like TMO_RS16385 1666927b2872d935a79ff97492872524 193 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 28 192 23.733 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 TMO_RS16385 1666927b2872d935a79ff97492872524 193 Pfam PF05239 PRC-barrel domain 122 192 2.6E-9 T 22-04-2016 IPR027275 PRC-barrel domain TMO_RS16385 1666927b2872d935a79ff97492872524 193 Pfam PF01782 RimM N-terminal domain 31 110 4.2E-20 T 22-04-2016 IPR002676 RimM protein GO:0006364 TMO_RS16385 1666927b2872d935a79ff97492872524 193 SUPERFAMILY SSF50447 27 112 6.71E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS16385 1666927b2872d935a79ff97492872524 193 Gene3D G3DSA:2.40.30.60 24 113 1.2E-22 T 22-04-2016 IPR002676 RimM protein GO:0006364 TMO_RS16385 1666927b2872d935a79ff97492872524 193 Gene3D G3DSA:2.30.30.240 121 192 2.4E-19 T 22-04-2016 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 SUPERFAMILY SSF56281 6 258 2.8E-66 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 PIRSF PIRSF005457 1 259 1.1E-100 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 259 42.553 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 258 5.3E-23 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 Gene3D G3DSA:3.60.15.10 8 258 1.4E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 57 77 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 Pfam PF00753 Metallo-beta-lactamase superfamily 29 175 6.1E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 PANTHER PTHR11935:SF7 4 258 1.2E-91 T 22-04-2016 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 PANTHER PTHR11935 4 258 1.2E-91 T 22-04-2016 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 258 1.4E-95 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 TMO_RS00775 482210c474c47b58dd6e26d5c6cebdbb 259 SMART SM00849 14 175 9.7E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 SUPERFAMILY SSF53850 91 290 1.0E-40 T 22-04-2016 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 SUPERFAMILY SSF46785 2 112 2.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 Gene3D G3DSA:3.40.190.10 183 263 2.8E-22 T 22-04-2016 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 Pfam PF03466 LysR substrate binding domain 90 289 4.6E-40 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 PANTHER PTHR30427 1 311 1.3E-85 T 22-04-2016 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 Gene3D G3DSA:1.10.10.10 2 81 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 Gene3D G3DSA:3.40.190.10 91 182 2.4E-21 T 22-04-2016 TMO_RS10050 6ca4fa13334d757ab4573ba5b8c2c421 320 PANTHER PTHR30427:SF1 1 311 1.3E-85 T 22-04-2016 TMO_RS13935 b487b889792391dbdace1c0059702e96 156 Gene3D G3DSA:1.10.490.10 30 133 8.5E-21 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS13935 b487b889792391dbdace1c0059702e96 156 SUPERFAMILY SSF46458 27 136 1.27E-26 T 22-04-2016 IPR009050 Globin-like TMO_RS13935 b487b889792391dbdace1c0059702e96 156 Pfam PF01152 Bacterial-like globin 25 113 3.3E-5 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 TMO_RS09070 4b2d5510b40ebc0ed194761fad255c01 347 Gene3D G3DSA:3.30.460.10 66 93 9.4E-4 T 22-04-2016 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 SUPERFAMILY SSF47757 2 70 2.09E-13 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 Gene3D G3DSA:1.10.155.10 2 69 3.0E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 54 6.8E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PANTHER PTHR24422:SF9 1 266 2.5E-95 T 22-04-2016 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 Gene3D G3DSA:3.40.50.150 70 265 1.5E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 SMART SM00138 3 267 1.0E-101 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 260 4.8E-60 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 104 124 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 25 38 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 226 249 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PRINTS PR00996 Glutamate methyltransferase family signature 207 221 3.9E-38 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 PANTHER PTHR24422 1 266 2.5E-95 T 22-04-2016 TMO_RS06175 b737dc8a9768546ae67c05bd69c44431 269 SUPERFAMILY SSF53335 71 266 2.78E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Gene3D G3DSA:3.30.300.30 469 567 6.5E-26 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Gene3D G3DSA:2.30.38.10 390 465 3.6E-29 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Pfam PF13193 AMP-binding enzyme C-terminal domain 484 559 3.7E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Gene3D G3DSA:3.40.50.980 43 157 1.3E-27 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Gene3D G3DSA:3.40.50.980 203 226 1.3E-27 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Pfam PF00501 AMP-binding enzyme 52 473 3.0E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 PANTHER PTHR24096 19 568 1.8E-159 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 Gene3D G3DSA:3.40.50.980 227 384 4.0E-42 T 22-04-2016 TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 ProSitePatterns PS00455 Putative AMP-binding domain signature. 218 229 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS07215 f839dcf95fe48dc686c5544644079774 584 SUPERFAMILY SSF56801 22 574 2.09E-147 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:2.30.38.10 326 400 9.6E-31 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 PANTHER PTHR24096:SF206 5 500 9.9E-172 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Pfam PF00501 AMP-binding enzyme 14 406 9.7E-98 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:3.30.300.30 401 499 1.1E-25 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 PANTHER PTHR24096 5 500 9.9E-172 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 SUPERFAMILY SSF56801 3 504 3.14E-146 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:3.40.50.980 169 325 1.6E-39 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 415 491 1.2E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 Gene3D G3DSA:3.40.50.980 3 168 3.5E-37 T 22-04-2016 TMO_RS07050 90388284d36676d5585c89b1c2fdecb7 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS01340 a70b76abbaf6222022d58ef20be74619 290 PANTHER PTHR13600:SF19 20 203 2.7E-32 T 22-04-2016 TMO_RS01340 a70b76abbaf6222022d58ef20be74619 290 Gene3D G3DSA:3.40.50.150 44 199 3.8E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01340 a70b76abbaf6222022d58ef20be74619 290 PANTHER PTHR13600 20 203 2.7E-32 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS01340 a70b76abbaf6222022d58ef20be74619 290 SUPERFAMILY SSF53335 22 263 4.75E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 Gene3D G3DSA:2.10.150.10 2 103 5.8E-49 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.057 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 PANTHER PTHR33569 3 103 9.4E-58 T 22-04-2016 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 1.4E-42 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 PANTHER PTHR33569:SF1 3 103 9.4E-58 T 22-04-2016 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 Pfam PF00699 Urease beta subunit 3 99 6.8E-44 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08690 b5e4616c993b24a1bc71f567b0802acb 111 SUPERFAMILY SSF51278 1 103 8.89E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 PANTHER PTHR33164:SF1 10 142 2.8E-28 T 22-04-2016 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 Pfam PF12802 MarR family 34 92 4.8E-14 T 22-04-2016 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 SUPERFAMILY SSF46785 10 142 3.26E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 Gene3D G3DSA:1.10.10.10 10 142 1.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.9E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.9E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.9E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 67 101 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 PANTHER PTHR33164 10 142 2.8E-28 T 22-04-2016 TMO_RS01235 4ac64659d3f010063700de6a8447f97d 143 SMART SM00347 28 128 1.9E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15990 bce353af7c76aa6cb8376adbc95662bd 236 PANTHER PTHR33254 13 236 7.0E-38 T 22-04-2016 TMO_RS15990 bce353af7c76aa6cb8376adbc95662bd 236 SUPERFAMILY SSF89562 27 193 6.02E-43 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS15990 bce353af7c76aa6cb8376adbc95662bd 236 Gene3D G3DSA:3.50.30.40 27 191 8.0E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS15990 bce353af7c76aa6cb8376adbc95662bd 236 Pfam PF03737 Demethylmenaquinone methyltransferase 29 182 1.5E-37 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS06600 4de2513f726e508008a86e3409490ece 504 PANTHER PTHR11228:SF32 26 371 2.7E-59 T 22-04-2016 TMO_RS06600 4de2513f726e508008a86e3409490ece 504 SUPERFAMILY SSF102114 20 344 1.83E-64 T 22-04-2016 TMO_RS06600 4de2513f726e508008a86e3409490ece 504 PANTHER PTHR11228 26 371 2.7E-59 T 22-04-2016 TMO_RS06600 4de2513f726e508008a86e3409490ece 504 Pfam PF13186 Iron-sulfur cluster-binding domain 269 334 5.2E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain TMO_RS06600 4de2513f726e508008a86e3409490ece 504 TIGRFAM TIGR03913 rad_SAM_trio: Y_X(10)_GDL-associated radical SAM protein 18 491 1.9E-225 T 22-04-2016 IPR023820 Radical SAM GDL-associated TMO_RS06600 4de2513f726e508008a86e3409490ece 504 SMART SM00729 27 228 1.3E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS06600 4de2513f726e508008a86e3409490ece 504 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 269 361 7.6E-14 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain TMO_RS06600 4de2513f726e508008a86e3409490ece 504 Pfam PF04055 Radical SAM superfamily 32 186 2.6E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS06600 4de2513f726e508008a86e3409490ece 504 Gene3D G3DSA:3.20.20.70 26 348 1.1E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 628 2.8E-242 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.920 499 630 7.5E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 2.7E-117 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 SMART SM00861 322 487 2.7E-68 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 PANTHER PTHR11624 23 221 0.0 T 22-04-2016 IPR033247 Transketolase family TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 PANTHER PTHR11624 242 642 0.0 T 22-04-2016 IPR033247 Transketolase family TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 PANTHER PTHR11624:SF20 23 221 0.0 T 22-04-2016 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 PANTHER PTHR11624:SF20 242 642 0.0 T 22-04-2016 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF02779 Transketolase, pyrimidine binding domain 322 482 1.8E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.970 338 498 4.0E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.970 243 337 6.8E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Gene3D G3DSA:3.40.50.970 24 201 6.8E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52922 494 631 1.19E-30 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Pfam PF02780 Transketolase, C-terminal domain 499 622 4.1E-26 T 22-04-2016 IPR033248 Transketolase, C-terminal domain TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 631 44.706 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52518 321 508 5.1E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52518 244 384 1.3E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04855 8b2fc4cef5285f22dc917598d8d77969 645 SUPERFAMILY SSF52518 7 199 1.3E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 Pfam PF01546 Peptidase family M20/M25/M40 70 380 1.5E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 SUPERFAMILY SSF55031 178 282 4.49E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 Pfam PF07687 Peptidase dimerisation domain 174 283 1.5E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 Gene3D G3DSA:3.30.70.360 187 281 1.4E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 SUPERFAMILY SSF53187 308 378 4.57E-54 T 22-04-2016 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 SUPERFAMILY SSF53187 10 177 4.57E-54 T 22-04-2016 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 11 380 5.0E-116 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 69 78 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 PANTHER PTHR11014 11 390 4.2E-101 T 22-04-2016 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 Gene3D G3DSA:3.40.630.10 327 380 6.6E-59 T 22-04-2016 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 Gene3D G3DSA:3.40.630.10 11 186 6.6E-59 T 22-04-2016 TMO_RS16775 35d82444b89d5b62813f5410ea11bc77 398 PANTHER PTHR11014:SF80 11 390 4.2E-101 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 139 529 1.8E-52 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290 579 657 2.2E-79 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290 278 561 2.2E-79 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290 37 247 2.2E-79 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.40.190.10 210 237 2.1E-9 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.40.190.10 269 390 2.1E-9 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 SUPERFAMILY SSF53850 111 244 1.18E-65 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 SUPERFAMILY SSF53850 272 644 1.18E-65 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.90.76.10 118 209 2.6E-18 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 Gene3D G3DSA:3.10.105.10 391 618 3.7E-29 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290:SF18 579 657 2.2E-79 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290:SF18 278 561 2.2E-79 T 22-04-2016 TMO_RS10195 87670f6e6a77ac82549fc298fedb21ac 660 PANTHER PTHR30290:SF18 37 247 2.2E-79 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PANTHER PTHR22939:SF79 110 405 2.3E-122 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PANTHER PTHR22939:SF79 48 84 2.3E-122 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.40.10.10 61 189 1.0E-39 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.40.10.10 190 301 3.3E-44 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50156 417 516 4.86E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.30.42.10 417 516 1.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 Pfam PF13180 PDZ domain 300 391 1.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PANTHER PTHR22939 110 405 2.3E-122 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PANTHER PTHR22939 48 84 2.3E-122 T 22-04-2016 TMO_RS13365 212fdc089c0792a58f58464874958964 518 Gene3D G3DSA:2.30.42.10 302 397 2.1E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50156 258 383 1.01E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 63 514 2.1E-149 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 SMART SM00228 416 508 1.0 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 SMART SM00228 300 382 2.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 157 177 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 254 271 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 340 352 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 198 222 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 PRINTS PR00834 HtrA/DegQ protease family signature 136 148 6.7E-54 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13365 212fdc089c0792a58f58464874958964 518 SUPERFAMILY SSF50494 61 292 2.91E-68 T 22-04-2016 IPR009003 Peptidase S1, PA clan TMO_RS13365 212fdc089c0792a58f58464874958964 518 Pfam PF13365 Trypsin-like peptidase domain 127 261 1.9E-35 T 22-04-2016 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 PANTHER PTHR21266:SF2 48 394 2.4E-49 T 22-04-2016 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 SUPERFAMILY SSF55961 188 394 3.85E-29 T 22-04-2016 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 146 1.8E-12 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 104 124 1.8E-12 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 98 1.8E-12 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 Gene3D G3DSA:3.90.380.10 174 244 4.1E-5 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 207 390 7.7E-23 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 Gene3D G3DSA:2.102.10.10 68 173 1.2E-29 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 SUPERFAMILY SSF50022 43 182 4.19E-35 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 Pfam PF00355 Rieske [2Fe-2S] domain 72 150 6.2E-16 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS15310 e2a27c9122e82eb6c75f852cd8d975c6 403 PANTHER PTHR21266 48 394 2.4E-49 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 Gene3D G3DSA:3.40.190.10 123 250 4.5E-25 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 PANTHER PTHR30024 1 320 4.2E-30 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 Gene3D G3DSA:3.40.190.10 251 319 2.0E-33 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 Gene3D G3DSA:3.40.190.10 33 111 2.0E-33 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 SUPERFAMILY SSF53850 32 320 4.22E-54 T 22-04-2016 TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 Pfam PF16868 NMT1-like family 38 318 7.8E-53 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 318 4.7E-61 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS07170 3ec084e3631ca7b6df5a302c53dc8f1f 322 PANTHER PTHR30024:SF5 1 320 4.2E-30 T 22-04-2016 TMO_RS15410 d1ac0209498fb84495052e7f47968e9c 108 Pfam PF01479 S4 domain 10 57 1.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS15410 d1ac0209498fb84495052e7f47968e9c 108 Gene3D G3DSA:3.10.290.10 9 101 1.3E-28 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS15410 d1ac0209498fb84495052e7f47968e9c 108 SMART SM00363 10 73 7.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS15410 d1ac0209498fb84495052e7f47968e9c 108 SUPERFAMILY SSF55174 9 95 2.75E-23 T 22-04-2016 TMO_RS11715 9649974c5826d460583b5af8ca970c3b 318 PANTHER PTHR10314:SF36 1 311 1.5E-91 T 22-04-2016 TMO_RS11715 9649974c5826d460583b5af8ca970c3b 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 295 1.4E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS11715 9649974c5826d460583b5af8ca970c3b 318 PANTHER PTHR10314 1 311 1.5E-91 T 22-04-2016 TMO_RS11715 9649974c5826d460583b5af8ca970c3b 318 SUPERFAMILY SSF53686 5 303 3.4E-83 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS11715 9649974c5826d460583b5af8ca970c3b 318 Gene3D G3DSA:3.40.50.1100 56 309 8.5E-64 T 22-04-2016 TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 Pfam PF02353 Mycolic acid cyclopropane synthetase 112 375 1.7E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 PIRSF PIRSF003085 7 401 2.0E-143 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 PANTHER PTHR10108:SF743 313 394 1.4E-119 T 22-04-2016 TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 PANTHER PTHR10108 313 394 1.4E-119 T 22-04-2016 TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 SUPERFAMILY SSF53335 120 380 7.69E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 Gene3D G3DSA:3.40.50.150 109 378 4.3E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 PANTHER PTHR10108 48 296 1.4E-119 T 22-04-2016 TMO_RS09410 5e6ee4078ce2a4325e262e08d2c438d3 412 PANTHER PTHR10108:SF743 48 296 1.4E-119 T 22-04-2016 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 SUPERFAMILY SSF53659 1 403 3.24E-156 T 22-04-2016 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 PIRSF PIRSF000108 1 405 5.4E-227 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 2 404 1.3E-215 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 270 289 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 395 1.2E-70 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 SMART SM01329 9 395 4.0E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 PANTHER PTHR11822 1 404 0.0 T 22-04-2016 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 TMO_RS05720 a5b8720f50c5c29b0c7fec81c3e12798 405 Gene3D G3DSA:3.40.718.10 3 403 1.8E-176 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 PANTHER PTHR32089 1 277 2.9E-46 T 22-04-2016 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 75 278 6.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 SMART SM00283 21 282 1.4E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 45 74 5.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 119 146 5.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 148 177 5.5E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 Gene3D G3DSA:1.10.287.950 37 250 3.7E-44 T 22-04-2016 TMO_RS02960 5c7eadd15bd69077c22c99b52a11eda7 457 SUPERFAMILY SSF58104 2 279 1.44E-52 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 PANTHER PTHR30579:SF0 1 290 7.2E-81 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 SUPERFAMILY SSF46785 6 113 7.12E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:1.10.10.10 6 89 1.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 SUPERFAMILY SSF53850 92 287 2.3E-29 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 Pfam PF03466 LysR substrate binding domain 91 283 6.7E-30 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:3.40.190.10 188 240 2.1E-7 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 PANTHER PTHR30579 1 290 7.2E-81 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 Gene3D G3DSA:3.40.190.10 91 187 2.5E-21 T 22-04-2016 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09845 5fd1234b92e4cfaadd1939763025404a 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 11 274 6.6E-115 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 SUPERFAMILY SSF161098 17 270 3.46E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 273 2.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 269 1.4E-90 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 Gene3D G3DSA:1.10.3720.10 21 269 1.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 PANTHER PTHR30406 7 279 7.1E-135 T 22-04-2016 TMO_RS07855 264455d3e0bb41ea34a7917a13a3aa60 279 PANTHER PTHR30406:SF6 7 279 7.1E-135 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_RS05390 aa42b2d67c14686bb2b9fc7e63741bf3 172 SUPERFAMILY SSF50475 19 152 7.64E-7 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS05390 aa42b2d67c14686bb2b9fc7e63741bf3 172 Gene3D G3DSA:2.30.110.10 27 158 1.1E-9 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 Gene3D G3DSA:3.40.640.10 48 241 6.7E-43 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 198 211 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 Gene3D G3DSA:3.90.1150.10 242 328 2.5E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 PANTHER PTHR11751:SF3 1 310 5.5E-45 T 22-04-2016 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 SUPERFAMILY SSF53383 5 333 3.62E-57 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 333 1.4E-92 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 Pfam PF00155 Aminotransferase class I and II 66 331 7.9E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS06825 2d02f55e46c9b0640da24282701c24c6 357 PANTHER PTHR11751 1 310 5.5E-45 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 PANTHER PTHR24096 1 527 1.2E-70 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.30.300.30 429 526 5.2E-22 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 SUPERFAMILY SSF56801 10 529 2.22E-101 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.40.50.980 11 136 6.3E-17 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.40.50.980 171 193 6.3E-17 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 PANTHER PTHR24096:SF232 1 527 1.2E-70 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 517 7.0E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:3.40.50.980 194 344 2.2E-28 T 22-04-2016 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Pfam PF00501 AMP-binding enzyme 75 432 2.3E-54 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS06945 b98e7fb9dc9d67030c3c72875507b294 549 Gene3D G3DSA:2.30.38.10 350 426 3.4E-14 T 22-04-2016 TMO_RS10970 e5e16bcee78dfecce216622f19e85279 145 Pfam PF13411 MerR HTH family regulatory protein 2 54 2.1E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS10970 e5e16bcee78dfecce216622f19e85279 145 PANTHER PTHR30204 1 90 3.1E-12 T 22-04-2016 TMO_RS10970 e5e16bcee78dfecce216622f19e85279 145 Gene3D G3DSA:1.10.1660.10 1 90 3.5E-17 T 22-04-2016 TMO_RS10970 e5e16bcee78dfecce216622f19e85279 145 SUPERFAMILY SSF46955 1 89 8.42E-16 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS10970 e5e16bcee78dfecce216622f19e85279 145 SMART SM00422 1 55 5.7E-4 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 Pfam PF00106 short chain dehydrogenase 7 192 3.5E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PANTHER PTHR24322:SF386 152 184 2.7E-62 T 22-04-2016 TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PANTHER PTHR24322:SF386 11 136 2.7E-62 T 22-04-2016 TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 Gene3D G3DSA:3.40.50.720 7 251 2.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PANTHER PTHR24322 152 184 2.7E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PANTHER PTHR24322 11 136 2.7E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 SUPERFAMILY SSF51735 7 250 5.86E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12785 1f21194b66597ec71226d39cd90a56e4 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 6.9E-42 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 SMART SM00878 337 443 3.7E-51 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 PANTHER PTHR18866 3 447 3.1E-255 T 22-04-2016 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF56059 84 352 1.03E-65 T 22-04-2016 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF52440 2 114 4.24E-43 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.40.50.20 3 130 8.0E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 3.9E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.30.470.20 205 445 8.1E-93 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 1.2E-35 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 SUPERFAMILY SSF51246 332 446 2.51E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif TMO_RS05800 23a46325cd6e36e9ebbd953f1c6ef112 454 Gene3D G3DSA:3.30.1490.20 131 202 2.8E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS00770 aa19e473a0a0fa032a18196d9028345d 258 SUPERFAMILY SSF53335 21 215 1.26E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00770 aa19e473a0a0fa032a18196d9028345d 258 PANTHER PTHR10108:SF820 89 227 2.0E-13 T 22-04-2016 TMO_RS00770 aa19e473a0a0fa032a18196d9028345d 258 Pfam PF08241 Methyltransferase domain 82 131 7.6E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 TMO_RS00770 aa19e473a0a0fa032a18196d9028345d 258 Gene3D G3DSA:3.40.50.150 25 216 3.0E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00770 aa19e473a0a0fa032a18196d9028345d 258 PANTHER PTHR10108 89 227 2.0E-13 T 22-04-2016 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PIRSF PIRSF001369 45 437 1.4E-171 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 Gene3D G3DSA:1.10.230.10 289 382 3.1E-42 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 Pfam PF00285 Citrate synthase, C-terminal domain 54 420 2.6E-136 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 SUPERFAMILY SSF48256 14 437 1.57E-171 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 21 431 5.8E-240 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 Gene3D G3DSA:1.10.580.10 60 288 3.5E-101 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PANTHER PTHR11739 7 437 3.0E-210 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 ProSitePatterns PS00480 Citrate synthase signature. 311 323 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 368 384 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 304 324 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 173 186 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 249 277 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 227 242 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS15260 5962b209f486dbbab4028795e3553fa1 437 PRINTS PR00143 Citrate synthase signature 388 402 2.7E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 SUPERFAMILY SSF56935 23 691 9.16E-117 T 22-04-2016 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 PANTHER PTHR32552:SF17 3 36 5.1E-128 T 22-04-2016 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 PANTHER PTHR32552:SF17 56 691 5.1E-128 T 22-04-2016 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 691 1.7E-99 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 Gene3D G3DSA:2.40.170.20 181 691 4.2E-114 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 166 9.0E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 PANTHER PTHR32552 3 36 5.1E-128 T 22-04-2016 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 PANTHER PTHR32552 56 691 5.1E-128 T 22-04-2016 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 Pfam PF00593 TonB dependent receptor 450 690 2.9E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS02175 b57ee78d08f7cabbbf850de6d9581b1a 691 Gene3D G3DSA:2.170.130.10 23 178 1.5E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS05435 e490070fe5b169ba804b490bdaf78c1b 129 PANTHER PTHR35446 1 127 3.3E-23 T 22-04-2016 TMO_RS05435 e490070fe5b169ba804b490bdaf78c1b 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 119 2.6E-17 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS05435 e490070fe5b169ba804b490bdaf78c1b 129 SUPERFAMILY SSF69118 5 128 1.28E-34 T 22-04-2016 IPR029032 AhpD-like TMO_RS05435 e490070fe5b169ba804b490bdaf78c1b 129 Gene3D G3DSA:1.20.1290.10 5 128 1.3E-32 T 22-04-2016 IPR029032 AhpD-like TMO_RS05435 e490070fe5b169ba804b490bdaf78c1b 129 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 60 107 2.8E-16 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS28990 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 Gene3D G3DSA:2.160.10.10 87 199 2.7E-18 T 22-04-2016 TMO_RS28990 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 117 2.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS28990 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 SUPERFAMILY SSF51161 2 198 5.96E-27 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS28990 cc1c6c4653a5e4db38a8e2c2a6f1f065 226 Gene3D G3DSA:3.40.50.20 1 45 2.4E-5 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF08676 MutL C terminal dimerisation domain 452 599 1.2E-48 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF54211 207 331 2.05E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 SMART SM01340 213 331 1.6E-55 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 215 330 2.3E-35 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF55874 3 203 1.06E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 SMART SM00853 456 599 3.7E-55 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:3.30.230.10 218 330 4.5E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 PANTHER PTHR10073 4 628 3.2E-144 T 22-04-2016 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 639 27.586 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Gene3D G3DSA:3.30.565.10 3 202 1.2E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 SUPERFAMILY SSF118116 451 641 5.23E-60 T 22-04-2016 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 125 3.2E-10 T 22-04-2016 TMO_RS14540 3f1ea1259bca231615ac9b502f7fcb7d 642 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 311 1.2E-88 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 6 19 7.4E-10 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 23 37 7.4E-10 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 38 51 7.4E-10 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 SUPERFAMILY SSF51230 3 77 2.93E-18 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 Pfam PF00364 Biotin-requiring enzyme 3 76 1.7E-14 T 22-04-2016 IPR000089 Biotin/lipoyl attachment TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 Gene3D G3DSA:2.40.50.100 3 77 5.2E-23 T 22-04-2016 TMO_RS05805 3bef784b1c06a9bc52bd39a788d9d514 78 PANTHER PTHR23151 3 77 1.7E-15 T 22-04-2016 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 Pfam PF00005 ABC transporter 40 187 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 Pfam PF00005 ABC transporter 290 446 3.2E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 SMART SM00382 47 235 6.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS03430 94635568c514f75e1635418d4c685c21 536 SMART SM00382 299 495 2.5 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS03430 94635568c514f75e1635418d4c685c21 536 Gene3D G3DSA:3.40.50.300 20 247 7.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03430 94635568c514f75e1635418d4c685c21 536 Gene3D G3DSA:3.40.50.300 271 505 2.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03430 94635568c514f75e1635418d4c685c21 536 SUPERFAMILY SSF52540 273 505 7.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03430 94635568c514f75e1635418d4c685c21 536 PANTHER PTHR24220 24 399 2.5E-155 T 22-04-2016 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 ProSitePatterns PS00211 ABC transporters family signature. 419 433 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 PANTHER PTHR24220:SF239 24 399 2.5E-155 T 22-04-2016 TMO_RS03430 94635568c514f75e1635418d4c685c21 536 SUPERFAMILY SSF52540 21 244 6.71E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03410 56c2f5fe96dddacf5ff0407e88fd8f69 114 SMART SM00966 31 76 0.0046 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 TMO_RS03410 56c2f5fe96dddacf5ff0407e88fd8f69 114 Gene3D G3DSA:2.10.260.10 27 70 2.7E-7 T 22-04-2016 TMO_RS03410 56c2f5fe96dddacf5ff0407e88fd8f69 114 SUPERFAMILY SSF89447 30 73 1.67E-7 T 22-04-2016 TMO_RS10900 d64f94d092db4cf27bd129b388521a53 258 Gene3D G3DSA:3.40.980.10 15 212 1.0E-34 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS10900 d64f94d092db4cf27bd129b388521a53 258 PANTHER PTHR13939 14 240 6.8E-42 T 22-04-2016 TMO_RS10900 d64f94d092db4cf27bd129b388521a53 258 Pfam PF00994 Probable molybdopterin binding domain 17 175 2.1E-33 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS10900 d64f94d092db4cf27bd129b388521a53 258 SUPERFAMILY SSF53218 15 206 7.59E-38 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS10900 d64f94d092db4cf27bd129b388521a53 258 SMART SM00852 17 178 1.8E-28 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS29960 b0a969c2fa8c02d79c07e06fac35ed04 166 PANTHER PTHR32268 1 162 7.5E-87 T 22-04-2016 TMO_RS29960 b0a969c2fa8c02d79c07e06fac35ed04 166 SUPERFAMILY SSF53474 1 162 2.89E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29960 b0a969c2fa8c02d79c07e06fac35ed04 166 Pfam PF00561 alpha/beta hydrolase fold 3 155 1.8E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS29960 b0a969c2fa8c02d79c07e06fac35ed04 166 Gene3D G3DSA:3.40.50.1820 2 125 1.9E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29960 b0a969c2fa8c02d79c07e06fac35ed04 166 PANTHER PTHR32268:SF11 1 162 7.5E-87 T 22-04-2016 TMO_RS15470 83a54c099f9654e50fc4d9152ec80d1e 241 Pfam PF03737 Demethylmenaquinone methyltransferase 19 184 1.7E-30 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS15470 83a54c099f9654e50fc4d9152ec80d1e 241 PANTHER PTHR33254:SF2 6 240 4.8E-84 T 22-04-2016 TMO_RS15470 83a54c099f9654e50fc4d9152ec80d1e 241 Gene3D G3DSA:3.50.30.40 16 192 4.1E-42 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS15470 83a54c099f9654e50fc4d9152ec80d1e 241 SUPERFAMILY SSF89562 16 194 4.19E-41 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein TMO_RS15470 83a54c099f9654e50fc4d9152ec80d1e 241 PANTHER PTHR33254 6 240 4.8E-84 T 22-04-2016 TMO_RS14520 3348124d894f726315a1084cbab2ea8d 297 Pfam PF14257 Domain of unknown function (DUF4349) 17 288 1.2E-45 T 22-04-2016 IPR025645 Domain of unknown function DUF4349 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 SUPERFAMILY SSF51735 185 386 1.05E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 Gene3D G3DSA:3.90.180.10 42 220 4.0E-33 T 22-04-2016 IPR011032 GroES-like TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 SMART SM00829 46 410 4.3E-8 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 PANTHER PTHR11695 302 404 3.8E-85 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 PANTHER PTHR11695 52 277 3.8E-85 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 SUPERFAMILY SSF50129 43 205 2.04E-31 T 22-04-2016 IPR011032 GroES-like TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 PANTHER PTHR11695:SF294 302 404 3.8E-85 T 22-04-2016 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 PANTHER PTHR11695:SF294 52 277 3.8E-85 T 22-04-2016 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 65 177 4.6E-14 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 Pfam PF00107 Zinc-binding dehydrogenase 223 373 6.9E-35 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 30 422 7.4E-186 T 22-04-2016 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 TMO_RS00620 ef9bfed30a427ef26a6f4f9dde947ac5 428 Gene3D G3DSA:3.40.50.720 221 358 2.3E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14505 32c64ca6a6b087403ba396c275adda1c 245 Pfam PF07722 Peptidase C26 10 223 3.2E-58 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 TMO_RS14505 32c64ca6a6b087403ba396c275adda1c 245 PANTHER PTHR11922 35 245 1.0E-47 T 22-04-2016 TMO_RS14505 32c64ca6a6b087403ba396c275adda1c 245 Gene3D G3DSA:3.40.50.880 9 226 8.9E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS14505 32c64ca6a6b087403ba396c275adda1c 245 PANTHER PTHR11922:SF18 35 245 1.0E-47 T 22-04-2016 TMO_RS14505 32c64ca6a6b087403ba396c275adda1c 245 SUPERFAMILY SSF52317 30 243 4.14E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 SUPERFAMILY SSF51735 13 169 4.62E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 15 108 2.2E-13 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 172 278 3.9E-30 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 Gene3D G3DSA:1.10.3730.10 171 278 6.6E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 PIRSF PIRSF000193 11 280 5.2E-63 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 PANTHER PTHR11645 15 278 3.0E-84 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 PANTHER PTHR11645:SF0 15 278 3.0E-84 T 22-04-2016 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 Gene3D G3DSA:3.40.50.720 12 169 5.9E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 14 278 1.9E-71 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 11 278 24.972 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 TMO_RS01550 0f30eae1d2d252b27a93a63a3ba7d659 280 SUPERFAMILY SSF48179 171 278 2.04E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 PANTHER PTHR30118:SF5 1 305 2.5E-83 T 22-04-2016 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 PANTHER PTHR30118 1 305 2.5E-83 T 22-04-2016 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:3.40.190.10 90 170 1.2E-20 T 22-04-2016 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:3.40.190.10 270 297 1.2E-20 T 22-04-2016 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 SUPERFAMILY SSF53850 92 294 8.69E-37 T 22-04-2016 TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:1.10.10.10 1 84 8.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 SUPERFAMILY SSF46785 2 82 2.61E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Pfam PF03466 LysR substrate binding domain 104 294 1.3E-24 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS12395 2959cc2f9fe726cc051668cfa20c256e 314 Gene3D G3DSA:3.40.190.10 171 266 8.4E-23 T 22-04-2016 TMO_RS10870 c296429f477fe1bae5650b7f18f474b8 101 SUPERFAMILY SSF51182 15 98 2.39E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS10870 c296429f477fe1bae5650b7f18f474b8 101 Pfam PF07883 Cupin domain 27 98 7.4E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS10870 c296429f477fe1bae5650b7f18f474b8 101 Gene3D G3DSA:2.60.120.10 16 98 1.2E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS15675 3970d26582e234416904e60146102168 354 Pfam PF04055 Radical SAM superfamily 15 158 4.8E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS15675 3970d26582e234416904e60146102168 354 PANTHER PTHR11228 1 340 1.6E-96 T 22-04-2016 TMO_RS15675 3970d26582e234416904e60146102168 354 SMART SM00729 9 210 0.0096 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS15675 3970d26582e234416904e60146102168 354 Gene3D G3DSA:3.20.20.70 7 321 5.8E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS15675 3970d26582e234416904e60146102168 354 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 354 160.182 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 TMO_RS15675 3970d26582e234416904e60146102168 354 PIRSF PIRSF037420 1 348 3.3E-103 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 TMO_RS15675 3970d26582e234416904e60146102168 354 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 5 339 2.3E-156 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 TMO_RS15675 3970d26582e234416904e60146102168 354 PANTHER PTHR11228:SF32 1 340 1.6E-96 T 22-04-2016 TMO_RS15675 3970d26582e234416904e60146102168 354 Pfam PF13186 Iron-sulfur cluster-binding domain 237 303 7.0E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain TMO_RS15675 3970d26582e234416904e60146102168 354 Pfam PF13353 4Fe-4S single cluster domain 16 92 1.4E-5 T 22-04-2016 TMO_RS15675 3970d26582e234416904e60146102168 354 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 240 330 1.2E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain TMO_RS15675 3970d26582e234416904e60146102168 354 SUPERFAMILY SSF102114 7 312 5.1E-65 T 22-04-2016 TMO_RS06700 453494eb95fd661b58d784f116b6ecf7 353 SUPERFAMILY SSF144064 13 350 2.65E-111 T 22-04-2016 TMO_RS06700 453494eb95fd661b58d784f116b6ecf7 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 36 161 3.4E-35 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 TMO_RS06700 453494eb95fd661b58d784f116b6ecf7 353 Pfam PF05171 Haemin-degrading HemS.ChuX domain 216 348 3.7E-34 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 TMO_RS06700 453494eb95fd661b58d784f116b6ecf7 353 Gene3D G3DSA:3.40.1570.10 9 162 2.0E-6 T 22-04-2016 TMO_RS06700 453494eb95fd661b58d784f116b6ecf7 353 Gene3D G3DSA:3.40.1570.10 213 325 5.7E-5 T 22-04-2016 TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 PANTHER PTHR22855:SF40 1 510 0.0 T 22-04-2016 TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 Pfam PF01039 Carboxyl transferase domain 27 508 3.5E-202 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 Gene3D G3DSA:3.90.226.10 252 510 2.2E-106 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 Gene3D G3DSA:3.90.226.10 3 251 6.2E-83 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 SUPERFAMILY SSF52096 2 254 1.2E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 SUPERFAMILY SSF52096 251 510 4.39E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS13095 60cbf7f8ace807a1fb23d7a50f6e7935 510 PANTHER PTHR22855 1 510 0.0 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 PANTHER PTHR22754 184 571 1.5E-75 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 SUPERFAMILY SSF56801 21 577 6.8E-91 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:2.30.38.10 392 464 3.5E-19 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:3.40.50.980 23 191 2.6E-16 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:3.40.50.980 192 356 4.4E-25 T 22-04-2016 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Pfam PF00501 AMP-binding enzyme 48 471 2.2E-61 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS28965 0b4edee4ed1f3a5e0d0a2be7a1a37ff4 598 Gene3D G3DSA:3.30.300.30 465 571 1.6E-12 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 268 410 1.4E-45 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:1.10.8.60 202 278 3.4E-30 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 SMART SM00382 68 215 2.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:3.40.50.300 33 201 8.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Pfam PF13177 DNA polymerase III, delta subunit 51 214 1.5E-39 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 PANTHER PTHR11669 19 409 2.3E-171 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 PANTHER PTHR11669 438 582 2.3E-171 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 PANTHER PTHR11669:SF0 19 409 2.3E-171 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 PANTHER PTHR11669:SF0 438 582 2.3E-171 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 SUPERFAMILY SSF48019 279 405 1.45E-25 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 SUPERFAMILY SSF52540 64 258 2.41E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Gene3D G3DSA:1.20.272.10 279 396 9.5E-23 T 22-04-2016 TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 512 638 3.0E-26 T 22-04-2016 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal TMO_RS13540 754f9bd8f098f65fdd479516fa815744 693 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 34 394 3.2E-127 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 Pfam PF04542 Sigma-70 region 2 18 78 2.6E-7 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 SUPERFAMILY SSF88946 8 77 2.39E-9 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 Gene3D G3DSA:1.10.10.10 108 167 8.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 PANTHER PTHR30173 16 384 3.9E-67 T 22-04-2016 TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 PANTHER PTHR30173:SF7 16 384 3.9E-67 T 22-04-2016 TMO_RS14810 0a682ca29e0c4a614810f44007ed2310 416 Gene3D G3DSA:1.10.1740.10 9 98 2.1E-7 T 22-04-2016 TMO_RS05855 3be85ed03311f34264a9e4b89c2fad7e 119 PANTHER PTHR33204:SF2 5 101 9.7E-40 T 22-04-2016 TMO_RS05855 3be85ed03311f34264a9e4b89c2fad7e 119 PANTHER PTHR33204 5 101 9.7E-40 T 22-04-2016 TMO_RS05855 3be85ed03311f34264a9e4b89c2fad7e 119 Pfam PF01638 HxlR-like helix-turn-helix 16 103 8.0E-30 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type TMO_RS05855 3be85ed03311f34264a9e4b89c2fad7e 119 SUPERFAMILY SSF46785 4 104 4.89E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05855 3be85ed03311f34264a9e4b89c2fad7e 119 Gene3D G3DSA:1.10.10.10 5 107 4.0E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Gene3D G3DSA:3.30.499.10 4 160 2.3E-24 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 466 9.3E-234 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 58.087 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PANTHER PTHR11670:SF38 1 309 9.8E-298 T 22-04-2016 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PANTHER PTHR11670:SF38 329 467 9.8E-298 T 22-04-2016 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Gene3D G3DSA:3.40.1060.10 168 283 1.2E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 SUPERFAMILY SSF53732 4 466 1.06E-166 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 6.5E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 135 150 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 401 414 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 288 302 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 197 210 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 345 356 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 110 118 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 211 224 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 84 97 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PRINTS PR00415 Aconitase family signature 121 134 1.7E-49 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PANTHER PTHR11670 1 309 9.8E-298 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 PANTHER PTHR11670 329 467 9.8E-298 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Gene3D G3DSA:3.30.499.10 337 466 1.3E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16400 5fc02157baa8fec865587af26a11a3f9 467 Gene3D G3DSA:3.30.499.10 295 305 1.3E-60 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS17775 5eafbeb8fd3c6148c4d15a1e88118156 276 SUPERFAMILY SSF55729 16 236 1.33E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17775 5eafbeb8fd3c6148c4d15a1e88118156 276 PANTHER PTHR37323:SF1 16 262 3.2E-42 T 22-04-2016 TMO_RS17775 5eafbeb8fd3c6148c4d15a1e88118156 276 PANTHER PTHR37323 16 262 3.2E-42 T 22-04-2016 TMO_RS17775 5eafbeb8fd3c6148c4d15a1e88118156 276 Gene3D G3DSA:3.40.630.30 22 160 1.7E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17775 5eafbeb8fd3c6148c4d15a1e88118156 276 Pfam PF13444 Acetyltransferase (GNAT) domain 33 140 1.1E-32 T 22-04-2016 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 SUPERFAMILY SSF50621 227 377 1.32E-31 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PANTHER PTHR11482 1 378 4.1E-124 T 22-04-2016 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 1.2E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 1.2E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 168 181 1.2E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 251 270 1.2E-18 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 28 261 6.1E-57 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 SUPERFAMILY SSF51419 24 263 1.4E-65 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01182 Ornithine decarboxylase signature 18 42 1.6E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01182 Ornithine decarboxylase signature 118 140 1.6E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01182 Ornithine decarboxylase signature 44 71 1.6E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01182 Ornithine decarboxylase signature 320 330 1.6E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PRINTS PR01182 Ornithine decarboxylase signature 88 112 1.6E-21 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 PANTHER PTHR11482:SF6 1 378 4.1E-124 T 22-04-2016 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 Gene3D G3DSA:2.40.37.10 245 378 1.4E-25 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 274 377 2.3E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS07950 7a83354862437dff341a3120cdc2c577 378 Gene3D G3DSA:3.20.20.10 27 244 3.1E-68 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 SUPERFAMILY SSF52402 2 203 9.86E-61 T 22-04-2016 TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 222 1.0E-46 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 PANTHER PTHR23293 171 267 1.9E-70 T 22-04-2016 TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 PANTHER PTHR23293 2 151 1.9E-70 T 22-04-2016 TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 Gene3D G3DSA:3.40.50.620 3 218 3.1E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 PANTHER PTHR23293:SF6 171 267 1.9E-70 T 22-04-2016 TMO_RS03485 cad07675aa9f1d568e291e0c2957d248 267 PANTHER PTHR23293:SF6 2 151 1.9E-70 T 22-04-2016 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 186 221 1.3E-10 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS13645 1e120841573adbfce2cb604432a09359 288 SUPERFAMILY SSF51161 11 272 1.8E-64 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Gene3D G3DSA:1.10.166.10 10 78 9.9E-28 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 143 177 4.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 12 77 1.7E-23 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 PANTHER PTHR19136 24 288 1.5E-103 T 22-04-2016 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 12 288 7.8E-120 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Gene3D G3DSA:2.160.10.10 100 269 3.1E-53 T 22-04-2016 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 PANTHER PTHR19136:SF52 24 288 1.5E-103 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 TMO_RS13645 1e120841573adbfce2cb604432a09359 288 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 9 288 54.964 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 TMO_RS11540 2d635c836a9690cc385038ef44f9b64b 191 PANTHER PTHR11080 2 183 7.2E-57 T 22-04-2016 TMO_RS11540 2d635c836a9690cc385038ef44f9b64b 191 PANTHER PTHR11080:SF2 2 183 7.2E-57 T 22-04-2016 TMO_RS11540 2d635c836a9690cc385038ef44f9b64b 191 SUPERFAMILY SSF52499 2 189 2.75E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS11540 2d635c836a9690cc385038ef44f9b64b 191 Pfam PF00857 Isochorismatase family 12 166 2.0E-24 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS11540 2d635c836a9690cc385038ef44f9b64b 191 Gene3D G3DSA:3.40.50.850 1 188 1.9E-55 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS08755 2f5483b5d5ccda031bb36a5c3200ae41 268 Pfam PF05050 Methyltransferase FkbM domain 39 186 1.0E-17 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS08755 2f5483b5d5ccda031bb36a5c3200ae41 268 SUPERFAMILY SSF53335 3 204 4.31E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS08755 2f5483b5d5ccda031bb36a5c3200ae41 268 Gene3D G3DSA:3.40.50.150 19 213 1.5E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS08755 2f5483b5d5ccda031bb36a5c3200ae41 268 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 38 181 2.0E-27 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS08755 2f5483b5d5ccda031bb36a5c3200ae41 268 PANTHER PTHR34203 39 215 6.3E-15 T 22-04-2016 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 Pfam PF00849 RNA pseudouridylate synthase 169 332 3.3E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 SUPERFAMILY SSF55174 92 181 1.03E-9 T 22-04-2016 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 PANTHER PTHR11079 10 403 5.0E-121 T 22-04-2016 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 SMART SM00363 94 152 1.4E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 215 229 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 Pfam PF01479 S4 domain 95 139 2.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 PANTHER PTHR11079:SF73 10 403 5.0E-121 T 22-04-2016 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 93 402 2.1E-89 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 SUPERFAMILY SSF55120 153 402 3.12E-73 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS04705 c9178d99e6bf7f5e8715711effc916db 405 Gene3D G3DSA:3.10.290.10 94 148 8.2E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 14 28 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 9 235 7.3E-65 T 22-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 PANTHER PTHR21091:SF127 9 177 6.4E-33 T 22-04-2016 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 216 3.6E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 PANTHER PTHR21091 9 177 6.4E-33 T 22-04-2016 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 Gene3D G3DSA:3.40.1010.10 8 133 7.4E-30 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 PIRSF PIRSF036427 7 241 5.2E-64 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 100 132 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13985 0bcfe186021f3439091ed6d103adc4af 241 SUPERFAMILY SSF53790 6 237 6.15E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 Pfam PF03466 LysR substrate binding domain 88 291 2.0E-28 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 SUPERFAMILY SSF46785 2 84 4.79E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 Gene3D G3DSA:3.40.190.10 89 175 1.5E-22 T 22-04-2016 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 PANTHER PTHR30346 1 308 1.1E-75 T 22-04-2016 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 Gene3D G3DSA:3.40.190.10 176 265 7.8E-13 T 22-04-2016 TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 Gene3D G3DSA:1.10.10.10 2 81 4.4E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11010 bbbc2e00e347fa473f13363e67ef66e4 317 SUPERFAMILY SSF53850 90 295 1.0E-28 T 22-04-2016 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 318 1.7E-13 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 287 1.3E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 Gene3D G3DSA:3.40.50.720 114 288 7.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 SUPERFAMILY SSF51735 108 287 3.81E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 PANTHER PTHR10996 1 318 2.1E-120 T 22-04-2016 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 PANTHER PTHR10996:SF127 1 318 2.1E-120 T 22-04-2016 TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 Gene3D G3DSA:3.40.50.720 6 113 1.2E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10510 cafaeb580cc0ba599d403bcb2371d01c 318 SUPERFAMILY SSF52283 1 127 3.19E-21 T 22-04-2016 TMO_RS09850 c429c11081a1c439284c88eaa028275e 219 PANTHER PTHR30086 9 215 2.8E-52 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS09850 c429c11081a1c439284c88eaa028275e 219 Pfam PF01810 LysE type translocator 24 215 1.5E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS09850 c429c11081a1c439284c88eaa028275e 219 PIRSF PIRSF006324 10 218 7.1E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 PANTHER PTHR30537 10 309 2.3E-106 T 22-04-2016 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 1.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 Gene3D G3DSA:3.40.190.10 105 205 1.2E-33 T 22-04-2016 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 Pfam PF03466 LysR substrate binding domain 102 309 1.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 19 77 2.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 SUPERFAMILY SSF46785 14 95 6.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 Gene3D G3DSA:1.10.10.10 13 96 8.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 SUPERFAMILY SSF53850 104 310 1.81E-39 T 22-04-2016 TMO_RS13780 8066b206f5893c0f7535d70819840dc2 311 PANTHER PTHR30537:SF26 10 309 2.3E-106 T 22-04-2016 TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 SUPERFAMILY SSF51735 14 235 2.13E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PANTHER PTHR24322:SF337 167 198 3.9E-46 T 22-04-2016 TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 Gene3D G3DSA:3.40.50.720 11 232 9.1E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.6E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.6E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.6E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 1.6E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.6E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 18 183 0.006 T 22-04-2016 TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 6.1E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 6.1E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PANTHER PTHR24322 167 198 3.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PANTHER PTHR24322 22 151 3.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 PANTHER PTHR24322:SF337 22 151 3.9E-46 T 22-04-2016 TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 Pfam PF00106 short chain dehydrogenase 19 210 2.1E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS09450 d7556718beb6f98bf375489113e06a87 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF54211 2 144 1.16E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 PANTHER PTHR11252:SF0 1 735 0.0 T 22-04-2016 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 PANTHER PTHR11252 1 735 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF54791 553 639 6.07E-22 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 PIRSF PIRSF005499 1 721 7.3E-296 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Gene3D G3DSA:3.30.1370.10 551 618 4.0E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF01138 3' exoribonuclease family, domain 1 13 144 7.2E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 5.9E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 1.3E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 4.5E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF00575 S1 RNA binding domain 617 689 1.3E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Gene3D G3DSA:3.30.230.70 312 540 4.9E-86 T 22-04-2016 IPR027408 PNPase/RNase PH domain TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Gene3D G3DSA:3.30.230.70 3 225 4.0E-87 T 22-04-2016 IPR027408 PNPase/RNase PH domain TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF00013 KH domain 555 611 1.8E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF54211 290 487 1.77E-47 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 690 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Gene3D G3DSA:2.40.50.140 619 693 4.3E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF50249 619 696 9.36E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SMART SM00322 551 616 3.7E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF55666 138 231 2.94E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SUPERFAMILY SSF55666 449 547 1.2E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 SMART SM00316 619 689 1.6E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 319 2.0E-17 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Gene3D G3DSA:1.10.10.400 241 311 2.9E-20 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS17860 88747064ceebb49d9482780ad704e5c7 740 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 692 30.91 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 TMO_RS14805 f9f065197a3329aed5947436d0dff545 124 SUPERFAMILY SSF54909 1 115 5.63E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS14805 f9f065197a3329aed5947436d0dff545 124 Pfam PF03795 YCII-related domain 1 115 2.8E-20 T 22-04-2016 IPR005545 YCII-related TMO_RS14805 f9f065197a3329aed5947436d0dff545 124 Gene3D G3DSA:3.30.70.1060 1 115 1.9E-38 T 22-04-2016 TMO_RS14805 f9f065197a3329aed5947436d0dff545 124 PANTHER PTHR35174 2 114 1.3E-34 T 22-04-2016 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 Gene3D G3DSA:1.20.58.410 12 100 6.1E-10 T 22-04-2016 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 SUPERFAMILY SSF75620 5 157 7.98E-30 T 22-04-2016 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 SMART SM00937 71 159 3.3E-18 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 Pfam PF03462 PCRF domain 19 158 1.8E-36 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 PANTHER PTHR11075:SF9 7 158 9.3E-40 T 22-04-2016 TMO_RS22475 bde3da37e909315ca1e752ebce5b9917 159 PANTHER PTHR11075 7 158 9.3E-40 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.450.20 313 423 9.6E-9 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.450.20 171 298 2.5E-11 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 673 1.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF12860 PAS fold 317 428 3.2E-10 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF12860 PAS fold 187 301 6.3E-13 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55874 501 675 1.83E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00387 558 675 5.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55785 294 412 2.09E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF55785 165 284 2.79E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00388 444 512 2.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:1.10.287.130 436 507 4.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 7.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 7.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 672 7.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 653 7.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SUPERFAMILY SSF47384 428 513 1.04E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PANTHER PTHR24423 271 676 4.9E-95 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 PANTHER PTHR24423 159 252 4.9E-95 T 22-04-2016 TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00091 181 252 18.0 T 22-04-2016 IPR000014 PAS domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 SMART SM00091 310 377 0.5 T 22-04-2016 IPR000014 PAS domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Gene3D G3DSA:3.30.565.10 514 679 3.6E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00875 6e758d110da95fb43fdb2befaabf2fdf 691 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 512 7.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 PANTHER PTHR24220:SF86 575 583 3.2E-95 T 22-04-2016 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 PANTHER PTHR24220:SF86 2 215 3.2E-95 T 22-04-2016 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 Pfam PF02687 FtsX-like permease family 506 618 1.1E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 Pfam PF00005 ABC transporter 5 153 3.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 Pfam PF12704 MacB-like periplasmic core domain 251 470 3.7E-39 T 22-04-2016 IPR025857 MacB-like periplasmic core domain TMO_RS11870 ba920dee1db12287c7f3323101173630 625 SUPERFAMILY SSF52540 2 209 1.01E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11870 ba920dee1db12287c7f3323101173630 625 PANTHER PTHR24220 575 583 3.2E-95 T 22-04-2016 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 PANTHER PTHR24220 2 215 3.2E-95 T 22-04-2016 TMO_RS11870 ba920dee1db12287c7f3323101173630 625 Gene3D G3DSA:3.40.50.300 3 210 2.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11870 ba920dee1db12287c7f3323101173630 625 SMART SM00382 14 201 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 Pfam PF01235 Sodium:alanine symporter family 52 451 1.8E-154 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PANTHER PTHR30330:SF1 1 471 1.5E-245 T 22-04-2016 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PANTHER PTHR30330 1 471 1.5E-245 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 409 429 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 302 320 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 348 370 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.5E-60 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS15850 98a59c076a5144873d4a4c4e5ce07212 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 440 9.4E-149 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS00735 e51a030db00b126cfedcae34538b7897 306 Gene3D G3DSA:1.20.59.10 3 93 4.1E-16 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 TMO_RS00735 e51a030db00b126cfedcae34538b7897 306 Pfam PF01817 Chorismate mutase type II 16 94 5.7E-16 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 TMO_RS00735 e51a030db00b126cfedcae34538b7897 306 SUPERFAMILY SSF48600 6 94 1.14E-15 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 TMO_RS00735 e51a030db00b126cfedcae34538b7897 306 SMART SM00830 16 97 3.6E-17 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 PANTHER PTHR15184 54 403 3.3E-192 T 22-04-2016 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 1.1E-214 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 2.6E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:3.40.50.300 131 417 8.3E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:2.40.50.140 49 117 9.5E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00959 5 47 4.3E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 244.882 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 5.5E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF50249 49 125 1.66E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00357 52 118 2.9E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF52540 91 372 7.19E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 161 364 2.9E-24 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 PANTHER PTHR15184:SF34 54 403 3.3E-192 T 22-04-2016 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 Gene3D G3DSA:1.10.720.10 1 46 1.0E-21 T 22-04-2016 TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SMART SM00382 171 356 3.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17165 b7b1a036af1d19b5e6694b01d5154af5 419 SUPERFAMILY SSF68912 1 46 5.49E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 Pfam PF04551 GcpE protein 15 355 6.6E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 Gene3D G3DSA:3.20.20.70 29 132 7.6E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 359 33.071 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 SUPERFAMILY SSF56014 268 356 1.36E-11 T 22-04-2016 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 PIRSF PIRSF004640 3 364 8.1E-146 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 SUPERFAMILY SSF51604 24 145 6.36E-10 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 PANTHER PTHR30454 9 363 1.4E-180 T 22-04-2016 TMO_RS01920 bfdf221e51f30486c704f4d449b64031 379 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 355 2.8E-134 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF46689 270 321 2.29E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF52317 1 198 8.51E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 PANTHER PTHR11019 56 325 4.3E-81 T 22-04-2016 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 Pfam PF01965 DJ-1/PfpI family 3 177 8.3E-22 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 Gene3D G3DSA:1.10.10.60 272 320 2.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 Pfam PF12833 Helix-turn-helix domain 240 319 3.4E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 263 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 PANTHER PTHR11019:SF58 56 325 4.3E-81 T 22-04-2016 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 SMART SM00342 234 317 3.2E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 Gene3D G3DSA:3.40.50.880 3 211 6.9E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 Gene3D G3DSA:1.10.10.60 230 271 7.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13010 b963b527f0c9b2fc03ce76c932b582fd 336 SUPERFAMILY SSF46689 228 267 7.53E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12195 f1feb03d3a7985edcb6ca73479260ef2 258 Pfam PF01925 Sulfite exporter TauE/SafE 15 244 1.1E-28 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS06745 02908d50668ab817d9e99d9058291b3b 233 PANTHER PTHR30625 1 222 3.7E-38 T 22-04-2016 TMO_RS06745 02908d50668ab817d9e99d9058291b3b 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 189 1.0E-30 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 Gene3D G3DSA:3.90.1150.10 253 340 2.9E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 PANTHER PTHR10289 1 338 1.9E-111 T 22-04-2016 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 PIRSF PIRSF038940 1 347 3.7E-142 T 22-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 PANTHER PTHR10289:SF8 1 338 1.9E-111 T 22-04-2016 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 Pfam PF01212 Beta-eliminating lyase 3 295 1.8E-62 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 Gene3D G3DSA:3.40.640.10 2 249 1.1E-56 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS04725 c100e05ef1ccacf2ac6cc3241414b713 350 SUPERFAMILY SSF53383 1 340 7.7E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 PANTHER PTHR30346 5 303 1.5E-59 T 22-04-2016 TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 SUPERFAMILY SSF53850 95 303 4.45E-36 T 22-04-2016 TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 Pfam PF03466 LysR substrate binding domain 93 301 5.2E-36 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 SUPERFAMILY SSF46785 5 107 8.77E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 Gene3D G3DSA:3.40.190.10 94 176 1.1E-18 T 22-04-2016 TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 Gene3D G3DSA:3.40.190.10 177 273 2.1E-17 T 22-04-2016 TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 Gene3D G3DSA:1.10.10.10 6 90 7.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16140 4a98dd908a67b59808cc65382944c55a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 Pfam PF07690 Major Facilitator Superfamily 33 369 1.0E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 Gene3D G3DSA:1.20.1250.20 222 413 4.4E-21 T 22-04-2016 TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 PANTHER PTHR11360:SF115 19 411 2.5E-94 T 22-04-2016 TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 SUPERFAMILY SSF103473 20 408 1.31E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 Gene3D G3DSA:1.20.1250.20 32 200 1.6E-16 T 22-04-2016 TMO_RS05295 a2ac598542c8a4dc704a42b4d46bc460 419 PANTHER PTHR11360 19 411 2.5E-94 T 22-04-2016 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 Gene3D G3DSA:1.10.530.10 542 681 1.4E-45 T 22-04-2016 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 Pfam PF01464 Transglycosylase SLT domain 542 642 1.5E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 SUPERFAMILY SSF53955 542 682 1.19E-43 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 Gene3D G3DSA:1.25.20.10 62 421 1.1E-27 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 SUPERFAMILY SSF48435 59 520 2.88E-50 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 550 578 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TMO_RS07960 8d45c64ed8d9a005772d3cfe8b02bde9 712 PANTHER PTHR21666 542 688 1.5E-40 T 22-04-2016 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 665 818 1.3E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 396 572 1.4E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 841 988 6.9E-26 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 238 395 1.2E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 3 61 1.3E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 596 642 3.2E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Gene3D G3DSA:2.150.10.10 79 217 1.9E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 311 403 3.14E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 74 147 1.83E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 20 38 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 962 980 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 874 892 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 953 971 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1041 1059 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 104 122 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 341 359 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 183 201 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 262 280 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 689 707 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 698 716 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 777 795 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 865 883 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 786 804 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 29 47 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 710 835 7.43E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 884 988 1.5E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 965 980 0.072 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 168 185 4.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 701 717 0.076 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 108 122 4.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 615 631 3.9 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 665 681 1.4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 266 281 0.26 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 6 22 4.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 789 804 0.34 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 247 264 0.074 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 771 788 0.33 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1027 1043 0.48 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 525 541 6.4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1045 1061 8.6E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 511 523 22.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 32 49 0.06 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 860 876 1.2 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 327 343 16.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 842 858 1.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 947 964 0.065 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 187 201 2.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 684 700 0.38 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 90 106 0.94 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 878 892 0.23 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 446 454 22.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 930 946 13.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 418 569 8.5E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 3 63 1.14E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 596 738 2.47E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 948 969 3.1E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 693 714 3.1E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 165 298 1.18E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 354 363 9.7E-7 T 22-04-2016 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 3 14 9.7E-7 T 22-04-2016 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 33 41 9.7E-7 T 22-04-2016 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 PRINTS PR00313 NodO calcium binding signature 336 344 9.7E-7 T 22-04-2016 TMO_RS03190 e1e0ac1a88af15298e276d11895b31b2 1079 SUPERFAMILY SSF51120 973 1063 1.44E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 Pfam PF13616 PPIC-type PPIASE domain 145 237 1.7E-25 T 22-04-2016 TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 SUPERFAMILY SSF109998 39 177 3.77E-17 T 22-04-2016 IPR027304 Trigger factor/SurA domain TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 PANTHER PTHR10657:SF11 1 281 2.7E-48 T 22-04-2016 TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 Gene3D G3DSA:3.10.50.40 141 259 6.4E-46 T 22-04-2016 TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 PANTHER PTHR10657 1 281 2.7E-48 T 22-04-2016 TMO_RS01805 6e5f55a6c02421976340b74ec0eb31bc 308 SUPERFAMILY SSF54534 134 236 1.7E-34 T 22-04-2016 TMO_RS04315 9660447a56f7334108726cb2540d3562 283 SUPERFAMILY SSF56281 5 273 1.48E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04315 9660447a56f7334108726cb2540d3562 283 SMART SM00849 27 216 0.0056 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04315 9660447a56f7334108726cb2540d3562 283 Gene3D G3DSA:3.60.15.10 2 275 5.5E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04315 9660447a56f7334108726cb2540d3562 283 PANTHER PTHR12553 1 273 3.6E-76 T 22-04-2016 TMO_RS04315 9660447a56f7334108726cb2540d3562 283 PANTHER PTHR12553:SF29 1 273 3.6E-76 T 22-04-2016 TMO_RS04315 9660447a56f7334108726cb2540d3562 283 Pfam PF12706 Beta-lactamase superfamily domain 38 239 1.6E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 Gene3D G3DSA:1.10.10.10 1 86 6.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 Pfam PF03466 LysR substrate binding domain 88 290 2.6E-47 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 SUPERFAMILY SSF53850 90 291 3.52E-43 T 22-04-2016 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 Gene3D G3DSA:3.40.190.10 175 264 1.6E-28 T 22-04-2016 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 PANTHER PTHR30419:SF8 1 289 1.2E-105 T 22-04-2016 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 SUPERFAMILY SSF46785 1 110 5.72E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.8E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 Gene3D G3DSA:3.40.190.10 89 174 1.3E-13 T 22-04-2016 TMO_RS01850 4e9158a10e569705b7221b308b40bd05 294 PANTHER PTHR30419 1 289 1.2E-105 T 22-04-2016 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 2.6E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50104 4 64 2.41E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.6E-21 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 PANTHER PTHR30053 1 187 3.4E-86 T 22-04-2016 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50249 130 186 1.05E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 44.017 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 SMART SM00841 130 185 3.8E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 SUPERFAMILY SSF50249 66 127 2.66E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.40.50.140 66 128 9.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 SMART SM01185 68 122 2.0E-26 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 PIRSF PIRSF005901 1 187 3.2E-67 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 1.5E-69 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 PANTHER PTHR30053:SF1 1 187 3.4E-86 T 22-04-2016 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.30.30.30 3 64 1.7E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Gene3D G3DSA:2.40.50.140 130 186 1.1E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04440 53907cccb5fce20eec9c8af8fb6e4448 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 61 2.1E-18 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Gene3D G3DSA:3.40.50.980 157 319 1.6E-41 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 SUPERFAMILY SSF56801 2 493 8.9E-140 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Pfam PF00501 AMP-binding enzyme 2 398 2.4E-97 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Gene3D G3DSA:3.30.300.30 395 493 6.4E-29 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Gene3D G3DSA:2.30.38.10 320 392 6.5E-26 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Gene3D G3DSA:3.40.50.980 2 156 1.3E-29 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 PANTHER PTHR24096 1 489 7.7E-140 T 22-04-2016 TMO_RS01165 462e6e3c8c00c68348a4e9b452649169 494 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 481 7.3E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Pfam PF00873 AcrB/AcrD/AcrF family 5 1038 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82866 298 498 1.7E-49 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.2090.10 733 819 1.7E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 819 868 3.14E-29 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 683 732 3.14E-29 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82866 842 1038 7.46E-46 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1430 580 682 5.4E-28 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 576 682 5.75E-26 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 137 184 8.37E-26 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 276 332 8.37E-26 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.70.1430 40 142 1.2E-33 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PANTHER PTHR32063 1 1044 0.0 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82714 733 818 5.62E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1046 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.0E-87 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82714 185 274 4.71E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 PANTHER PTHR32063:SF26 1 1044 0.0 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 SUPERFAMILY SSF82693 40 134 4.97E-28 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:1.10.3850.10 284 500 2.5E-59 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:1.10.3850.10 825 1039 3.3E-61 T 22-04-2016 TMO_RS11320 f029ea65d28442184c7e6c0458f1d040 1056 Gene3D G3DSA:3.30.2090.10 184 275 1.4E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS15600 1b87d380b89133947bfe5015f16e58b3 402 SUPERFAMILY SSF53822 46 400 2.17E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS15600 1b87d380b89133947bfe5015f16e58b3 402 Pfam PF13458 Periplasmic binding protein 46 383 1.3E-44 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS15600 1b87d380b89133947bfe5015f16e58b3 402 PANTHER PTHR30483 1 397 1.6E-63 T 22-04-2016 TMO_RS15600 1b87d380b89133947bfe5015f16e58b3 402 Gene3D G3DSA:3.40.50.2300 46 247 1.7E-33 T 22-04-2016 TMO_RS15600 1b87d380b89133947bfe5015f16e58b3 402 PANTHER PTHR30483:SF6 1 397 1.6E-63 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 PANTHER PTHR24220 7 252 1.0E-99 T 22-04-2016 TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 SMART SM00382 30 235 1.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 Pfam PF00005 ABC transporter 21 179 3.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 SUPERFAMILY SSF52540 5 249 7.82E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 Gene3D G3DSA:3.40.50.300 2 247 4.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 3.4E-12 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS04655 2c47dfc51eda42258c2879c975aa777a 252 PANTHER PTHR24220:SF358 7 252 1.0E-99 T 22-04-2016 TMO_RS02525 9200fca7f1a9e4fa1ab2d595a137cdf3 177 SUPERFAMILY SSF88874 1 172 1.7E-38 T 22-04-2016 TMO_RS02525 9200fca7f1a9e4fa1ab2d595a137cdf3 177 Gene3D G3DSA:3.90.1340.10 1 68 2.2E-20 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS02525 9200fca7f1a9e4fa1ab2d595a137cdf3 177 Pfam PF07484 Phage Tail Collar Domain 7 62 4.1E-16 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS02525 9200fca7f1a9e4fa1ab2d595a137cdf3 177 PANTHER PTHR34720 1 176 4.8E-38 T 22-04-2016 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 PANTHER PTHR11760 2 225 6.1E-133 T 22-04-2016 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 39.061 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 Gene3D G3DSA:3.30.1140.32 107 206 1.0E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.2E-40 T 22-04-2016 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 SMART SM00322 59 124 9.9E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 8.7E-93 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 Pfam PF07650 KH domain 38 110 9.5E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 SUPERFAMILY SSF54821 107 205 1.18E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 SUPERFAMILY SSF54814 2 105 6.8E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 Gene3D G3DSA:3.30.300.20 17 106 4.0E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 PANTHER PTHR11760:SF19 2 225 6.1E-133 T 22-04-2016 TMO_RS13225 83a5b98933c22e71a5b1786ddc98943e 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 Pfam PF02082 Transcriptional regulator 3 84 8.5E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 2.0E-31 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 Gene3D G3DSA:1.10.10.10 3 135 9.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 PANTHER PTHR33221 3 147 3.1E-36 T 22-04-2016 TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 SUPERFAMILY SSF46785 3 133 8.51E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17910 dee4b9d02bc66defb16660a76cf409db 151 PANTHER PTHR33221:SF1 3 147 3.1E-36 T 22-04-2016 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 1.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 117 1.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.3E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 PIRSF PIRSF001467 4 158 9.3E-32 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 13 152 2.8E-45 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 SUPERFAMILY SSF50891 7 154 3.07E-47 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 PANTHER PTHR11071 17 138 1.6E-39 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 TMO_RS10610 8b588450bace29efc8938108c4dfdf23 159 Gene3D G3DSA:2.40.100.10 8 154 2.9E-45 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PANTHER PTHR13370:SF8 13 261 3.3E-50 T 22-04-2016 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PANTHER PTHR13370 13 261 3.3E-50 T 22-04-2016 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 33 39 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 Pfam PF01555 DNA methylase 30 251 6.9E-54 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 Gene3D G3DSA:3.40.50.150 13 259 1.4E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 212 230 6.1E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 29 43 6.1E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 78 98 6.1E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 193 210 6.1E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 235 255 6.1E-39 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 TMO_RS13850 4ad84e58899d70e663b094b80877b3ca 367 SUPERFAMILY SSF53335 12 255 5.4E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 TIGRFAM TIGR00492 alr: alanine racemase 22 378 5.0E-74 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 SUPERFAMILY SSF51419 26 245 1.44E-59 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 SUPERFAMILY SSF50621 245 379 1.08E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 Pfam PF00842 Alanine racemase, C-terminal domain 252 377 2.2E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 142 154 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 268 283 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 214 241 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 285 300 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 80 98 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 44 60 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 176 187 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 360 373 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PRINTS PR00992 Alanine racemase signature 306 323 8.4E-48 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 Gene3D G3DSA:2.40.37.10 235 379 2.5E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PANTHER PTHR30511 16 379 8.6E-110 T 22-04-2016 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 SMART SM01005 252 378 3.8E-67 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 Hamap MF_01201 Alanine racemase. 19 378 30.911 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 PANTHER PTHR30511:SF0 16 379 8.6E-110 T 22-04-2016 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 Gene3D G3DSA:3.20.20.10 28 234 1.9E-62 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 Pfam PF01168 Alanine racemase, N-terminal domain 26 241 2.7E-58 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS01115 107b37dccbbe7a7e1e32a176eb311ef9 380 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 49 59 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 PIRSF PIRSF005894 2 112 5.1E-46 T 22-04-2016 IPR014434 Monothiol glutaredoxin TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 105 1.7E-44 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 PANTHER PTHR10293 10 109 1.1E-56 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 Gene3D G3DSA:3.40.30.10 12 105 1.6E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 Pfam PF00462 Glutaredoxin 21 85 3.0E-20 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_RS11395 9e22af0e1760cf510ef0a0d71d8bd99b 117 SUPERFAMILY SSF52833 8 108 9.72E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF55874 287 466 2.1E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF47384 218 298 3.73E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 SUPERFAMILY SSF55785 106 207 3.05E-7 T 22-04-2016 IPR000014 PAS domain TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:1.10.287.130 223 283 3.8E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 SMART SM00387 344 468 1.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 296 3.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 407 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 421 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 3.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:3.30.450.20 119 222 1.6E-8 T 22-04-2016 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Gene3D G3DSA:3.30.565.10 284 468 1.3E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF08448 PAS fold 123 224 2.0E-6 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 SMART SM00388 231 298 8.6E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PANTHER PTHR24423 79 375 1.7E-86 T 22-04-2016 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 PANTHER PTHR24423 393 467 1.7E-86 T 22-04-2016 TMO_RS17635 0a6330f94db678d00b5641de79f3cc06 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 467 6.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10280 ae420c2f4122af1d6550caef78b1a072 124 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 14 118 6.7E-6 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 SUPERFAMILY SSF74942 84 154 1.07E-15 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 Pfam PF02576 Putative ribosome maturation factor RimP 10 149 1.8E-40 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 SUPERFAMILY SSF75420 3 83 3.66E-21 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 153 24.185 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 PANTHER PTHR33867:SF1 1 157 3.4E-40 T 22-04-2016 TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 PANTHER PTHR33867 1 157 3.4E-40 T 22-04-2016 TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 Gene3D G3DSA:2.30.30.180 88 150 4.0E-10 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal TMO_RS17825 e5b28ea92b00d12829536b0f282d2328 164 Gene3D G3DSA:3.30.300.70 2 80 4.4E-25 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 SUPERFAMILY SSF50475 22 176 1.08E-40 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 Gene3D G3DSA:2.30.110.10 20 176 4.7E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 SMART SM00903 30 178 6.3E-47 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 PANTHER PTHR30466:SF7 21 176 4.6E-42 T 22-04-2016 TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 PANTHER PTHR30466 21 176 4.6E-42 T 22-04-2016 TMO_RS03890 f4269e80a80b6baa70a63e58144b8266 183 Pfam PF01613 Flavin reductase like domain 30 179 4.0E-33 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 PANTHER PTHR30483 9 409 4.4E-168 T 22-04-2016 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 SUPERFAMILY SSF53822 37 408 5.38E-80 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 PANTHER PTHR30483:SF17 9 409 4.4E-168 T 22-04-2016 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 Gene3D G3DSA:3.40.50.2300 33 160 2.2E-21 T 22-04-2016 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 Gene3D G3DSA:3.40.50.2300 312 352 2.2E-21 T 22-04-2016 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 Gene3D G3DSA:3.40.50.2300 161 311 1.4E-18 T 22-04-2016 TMO_RS02435 b9359d48ef6414048476cfdfaf72bd6c 409 Pfam PF13458 Periplasmic binding protein 37 373 5.6E-81 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 Gene3D G3DSA:1.20.1250.20 25 211 3.2E-22 T 22-04-2016 TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 Pfam PF05977 Transmembrane secretion effector 18 533 3.8E-185 T 22-04-2016 IPR010290 Transmembrane secretion effector TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 PANTHER PTHR23513 9 437 1.9E-123 T 22-04-2016 TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 Gene3D G3DSA:1.20.1250.20 247 413 1.5E-8 T 22-04-2016 TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 SUPERFAMILY SSF103473 25 414 2.35E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS16880 d056f2f142c72efa2b81a838c76852e6 551 PANTHER PTHR23513:SF7 9 437 1.9E-123 T 22-04-2016 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 327 3.4E-101 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 Pfam PF00579 tRNA synthetases class I (W and Y) 3 265 2.1E-80 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PANTHER PTHR10055 3 330 1.6E-181 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 4.8E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 4.8E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 4.8E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 4.8E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 Gene3D G3DSA:1.10.240.10 205 295 4.4E-17 T 22-04-2016 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 PANTHER PTHR10055:SF10 3 330 1.6E-181 T 22-04-2016 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 Gene3D G3DSA:3.40.50.620 3 204 1.3E-90 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 SUPERFAMILY SSF52374 2 327 2.34E-97 T 22-04-2016 TMO_RS17680 7b1ae036267faefdb5abab00cb99d72f 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 328 40.374 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PANTHER PTHR10625 98 321 1.2E-62 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PANTHER PTHR10625 26 74 1.2E-62 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 SUPERFAMILY SSF52768 1 336 9.11E-82 T 22-04-2016 TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 186 201 1.8E-11 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 154 177 1.8E-11 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PRINTS PR01270 Histone deacetylase superfamily signature 272 282 1.8E-11 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 Gene3D G3DSA:3.40.800.20 2 336 8.3E-73 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 Pfam PF00850 Histone deacetylase domain 26 333 3.0E-59 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PANTHER PTHR10625:SF121 98 321 1.2E-62 T 22-04-2016 TMO_RS01410 55f458fc4059e32a5dc3ebfb1761d835 342 PANTHER PTHR10625:SF121 26 74 1.2E-62 T 22-04-2016 TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 PANTHER PTHR24220:SF480 3 219 1.8E-101 T 22-04-2016 TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 SMART SM00382 26 283 1.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 Pfam PF00005 ABC transporter 19 161 3.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 Gene3D G3DSA:3.40.50.300 2 222 1.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 SUPERFAMILY SSF52540 2 222 4.15E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06200 5d0e4fbecf0ae1c8eaee2a29a733bb6f 308 PANTHER PTHR24220 3 219 1.8E-101 T 22-04-2016 TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 2.1E-62 T 22-04-2016 TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PANTHER PTHR24322 11 140 5.4E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 PANTHER PTHR24322 156 187 5.4E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 Gene3D G3DSA:3.40.50.720 2 245 1.6E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 SUPERFAMILY SSF51735 5 245 1.26E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16425 5206a4d3babb03bb13d2a495529a7e80 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS13970 692b6d9af42eb09cbf67f64b819f7fd2 193 PIRSF PIRSF016919 1 193 7.5E-58 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein TMO_RS13970 692b6d9af42eb09cbf67f64b819f7fd2 193 Pfam PF04955 HupE / UreJ protein 13 190 1.4E-56 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 Gene3D G3DSA:3.40.350.10 8 129 9.4E-20 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 Pfam PF01321 Creatinase/Prolidase N-terminal domain 13 145 4.6E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 Gene3D G3DSA:3.90.230.10 144 379 1.3E-46 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 SUPERFAMILY SSF55920 144 378 9.03E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 SUPERFAMILY SSF53092 6 126 3.66E-21 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 PANTHER PTHR10804 138 374 4.7E-31 T 22-04-2016 TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 Pfam PF00557 Metallopeptidase family M24 154 364 2.5E-30 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS06800 b39f31c4b2ba552fd7e743cdf63bd1b4 384 PANTHER PTHR10804:SF86 138 374 4.7E-31 T 22-04-2016 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 SMART SM00965 75 126 1.4E-5 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 152 261 3.2E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 SUPERFAMILY SSF56935 140 773 4.71E-115 T 22-04-2016 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Gene3D G3DSA:2.170.130.10 148 265 1.8E-37 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 PANTHER PTHR32552 132 773 8.5E-91 T 22-04-2016 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 756 773 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Gene3D G3DSA:2.40.170.20 266 773 9.5E-92 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 Pfam PF00593 TonB dependent receptor 500 771 4.4E-40 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06555 a7e5ecc1c07de498e18b5e0c4fee59dd 773 PANTHER PTHR32552:SF15 132 773 8.5E-91 T 22-04-2016 TMO_RS16090 613bf83c4977da35279ddf9d9c20073b 110 Pfam PF00893 Small Multidrug Resistance protein 6 97 1.1E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 TMO_RS16090 613bf83c4977da35279ddf9d9c20073b 110 SUPERFAMILY SSF103481 10 109 5.75E-17 T 22-04-2016 TMO_RS16090 613bf83c4977da35279ddf9d9c20073b 110 PANTHER PTHR30561 6 107 6.9E-40 T 22-04-2016 TMO_RS16090 613bf83c4977da35279ddf9d9c20073b 110 PANTHER PTHR30561:SF1 6 107 6.9E-40 T 22-04-2016 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 406 425 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF04963 Sigma-54 factor, core binding domain 157 344 2.0E-44 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 498 505 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 517 3.2E-120 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PANTHER PTHR32248 96 520 2.9E-139 T 22-04-2016 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PANTHER PTHR32248 2 76 2.9E-139 T 22-04-2016 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 1.1E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 Gene3D G3DSA:1.10.260.40 407 430 8.1E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PIRSF PIRSF000774 1 520 2.7E-138 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PANTHER PTHR32248:SF4 96 520 2.9E-139 T 22-04-2016 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PANTHER PTHR32248:SF4 2 76 2.9E-139 T 22-04-2016 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 Pfam PF04552 Sigma-54, DNA binding domain 359 518 4.8E-68 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 493 511 2.6E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 418 430 2.6E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 230 247 2.6E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS00915 0f7138f5cee2524b5a64a5b98aa5c26f 524 PRINTS PR00045 Sigma-54 factor signature 434 445 2.6E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 Pfam PF08402 TOBE domain 260 326 5.8E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 Gene3D G3DSA:3.40.50.300 6 248 1.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 Pfam PF00005 ABC transporter 30 172 3.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 PANTHER PTHR24220 14 250 2.4E-110 T 22-04-2016 TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 PANTHER PTHR24220:SF123 14 250 2.4E-110 T 22-04-2016 TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 SMART SM00382 38 222 6.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 SUPERFAMILY SSF50331 246 326 4.08E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS17550 cc6320552e9a1122c6d6a6cde7053bd1 333 SUPERFAMILY SSF52540 13 250 1.13E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 SUPERFAMILY SSF52172 4 189 1.42E-42 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 Gene3D G3DSA:3.40.50.2300 4 125 1.1E-42 T 22-04-2016 TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 Gene3D G3DSA:1.10.10.10 146 194 5.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 SMART SM01012 134 189 5.5E-14 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 Pfam PF03861 ANTAR domain 137 189 2.2E-13 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 TMO_RS02560 ebaa4515e5cfd814e236b687cce2d573 202 PIRSF PIRSF036382 1 196 9.5E-48 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator TMO_RS08910 d3176d00aba20e3d68592af649cea161 195 SUPERFAMILY SSF111384 38 179 1.1E-25 T 22-04-2016 IPR024930 Skp domain TMO_RS08910 d3176d00aba20e3d68592af649cea161 195 SMART SM00935 23 179 2.0E-33 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 TMO_RS08910 d3176d00aba20e3d68592af649cea161 195 Gene3D G3DSA:3.30.910.20 28 179 5.5E-14 T 22-04-2016 TMO_RS08910 d3176d00aba20e3d68592af649cea161 195 PANTHER PTHR35089 10 185 3.6E-23 T 22-04-2016 TMO_RS08910 d3176d00aba20e3d68592af649cea161 195 Pfam PF03938 Outer membrane protein (OmpH-like) 24 178 5.7E-26 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 TMO_RS20240 2a1ad5f804bf6022e9e4d98f2d50dac9 340 SUPERFAMILY SSF53335 43 276 1.15E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS20240 2a1ad5f804bf6022e9e4d98f2d50dac9 340 Pfam PF08242 Methyltransferase domain 117 216 3.7E-18 T 22-04-2016 IPR013217 Methyltransferase type 12 TMO_RS20240 2a1ad5f804bf6022e9e4d98f2d50dac9 340 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 280 291 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 TMO_RS20240 2a1ad5f804bf6022e9e4d98f2d50dac9 340 PANTHER PTHR11712 34 292 6.8E-59 T 22-04-2016 TMO_RS20240 2a1ad5f804bf6022e9e4d98f2d50dac9 340 Gene3D G3DSA:3.40.50.150 93 268 2.3E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 Gene3D G3DSA:1.20.1090.10 198 389 3.4E-45 T 22-04-2016 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 274 294 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 PANTHER PTHR11496:SF76 13 389 2.3E-94 T 22-04-2016 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 SUPERFAMILY SSF56796 12 379 2.09E-78 T 22-04-2016 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 377 1.7E-70 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 Gene3D G3DSA:3.40.50.1970 12 197 4.1E-23 T 22-04-2016 TMO_RS03900 1b38f8a7c10929e2c74decfa8b721052 390 PANTHER PTHR11496 13 389 2.3E-94 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 PANTHER PTHR24095:SF46 2 667 1.2E-273 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Pfam PF00501 AMP-binding enzyme 103 535 1.9E-50 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 SUPERFAMILY SSF56801 25 656 8.11E-123 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 658 4.1E-249 T 22-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 ProSitePatterns PS00455 Putative AMP-binding domain signature. 278 289 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:2.30.38.10 456 530 1.6E-4 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:3.40.50.980 285 434 5.1E-18 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:3.30.300.30 534 624 5.8E-11 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 PANTHER PTHR24095 2 667 1.2E-273 T 22-04-2016 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 42 95 8.4E-9 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 TMO_RS06315 2c2a7e183d5e3c1a203e66c41f94ca5a 675 Gene3D G3DSA:3.40.50.980 102 284 2.8E-26 T 22-04-2016 TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 SUPERFAMILY SSF54427 82 223 6.68E-44 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 Pfam PF04280 Tim44-like domain 83 223 1.7E-42 T 22-04-2016 IPR007379 Tim44-like domain TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 PIRSF PIRSF031890 1 227 1.3E-63 T 22-04-2016 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 SMART SM00978 80 225 3.3E-46 T 22-04-2016 IPR007379 Tim44-like domain TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 PANTHER PTHR10721 82 220 3.6E-22 T 22-04-2016 TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 PANTHER PTHR10721:SF2 82 220 3.6E-22 T 22-04-2016 TMO_RS17095 bc3201a7bf6962fdba244ffb2c628233 227 ProDom PD111165 RP434 80 221 1.0E-6 T 22-04-2016 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 SUPERFAMILY SSF46785 1 61 1.04E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 Pfam PF01037 Lrp/AsnC ligand binding domain 78 138 2.8E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 SUPERFAMILY SSF54909 64 145 5.63E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 Pfam PF13404 AsnC-type helix-turn-helix domain 2 42 3.9E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 SMART SM00344 2 109 5.0E-35 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 Gene3D G3DSA:1.10.10.10 1 52 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 PANTHER PTHR30154 2 163 1.1E-42 T 22-04-2016 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 8.5E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 8.5E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 8.5E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS06685 5c4341c2004e500554b1758b3d845947 163 Gene3D G3DSA:3.30.70.920 56 135 3.2E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 412 145.089 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 PANTHER PTHR23100:SF0 21 412 2.6E-161 T 22-04-2016 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 Gene3D G3DSA:3.60.70.12 16 283 2.1E-91 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 SUPERFAMILY SSF56266 19 409 7.98E-129 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 18 412 9.2E-118 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 PANTHER PTHR23100 21 412 2.6E-161 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 30 410 3.0E-99 T 22-04-2016 TMO_RS01810 1d5af4c2e7bfc0f427e0241414b68835 412 Pfam PF01960 ArgJ family 27 412 2.0E-135 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 Gene3D G3DSA:3.40.1640.10 6 164 3.2E-61 T 22-04-2016 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 Hamap MF_01830 UPF0317 protein . 7 262 51.616 T 22-04-2016 IPR016938 Uncharacterised protein family UPF0317 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 PIRSF PIRSF029755 3 263 4.5E-114 T 22-04-2016 IPR016938 Uncharacterised protein family UPF0317 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 SUPERFAMILY SSF160920 4 255 1.57E-106 T 22-04-2016 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 PANTHER PTHR32022 8 263 1.2E-132 T 22-04-2016 TMO_RS06405 562d24496e8a085faca15e5572ad168b 263 Pfam PF07286 Protein of unknown function (DUF1445) 112 254 2.7E-64 T 22-04-2016 IPR009906 Protein of unknown function DUF1445 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SUPERFAMILY SSF55781 37 185 2.29E-25 T 22-04-2016 IPR029016 GAF domain-like TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Gene3D G3DSA:1.10.287.130 192 254 3.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 4.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 4.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 4.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SMART SM00388 199 268 1.1E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 PANTHER PTHR24423 178 418 1.4E-78 T 22-04-2016 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 PANTHER PTHR24423 101 112 1.4E-78 T 22-04-2016 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Gene3D G3DSA:3.30.565.10 255 419 2.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SUPERFAMILY SSF47384 185 269 7.26E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 268 2.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SMART SM00387 310 420 2.0E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Gene3D G3DSA:3.30.450.40 26 189 1.3E-21 T 22-04-2016 IPR029016 GAF domain-like TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SUPERFAMILY SSF55874 257 419 2.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Pfam PF13185 GAF domain 37 177 2.4E-18 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 SMART SM00065 36 187 2.6E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS00750 2a7ea3654ef757e9fc6c415a671d59d4 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 419 1.8E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF52833 4 86 4.7E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 PANTHER PTHR11780:SF0 2 506 5.8E-237 T 22-04-2016 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF142984 341 421 4.05E-19 T 22-04-2016 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 508 1.5E-31 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SMART SM00928 426 471 9.1E-18 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 316 7.9E-45 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF142019 97 337 6.93E-86 T 22-04-2016 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 PANTHER PTHR11780 2 506 5.8E-237 T 22-04-2016 TMO_RS05140 8fb1d7b675ab21c9d2f2aba03997c2f3 518 SUPERFAMILY SSF140490 423 508 4.84E-27 T 22-04-2016 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 SUPERFAMILY SSF46689 548 639 8.24E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 Gene3D G3DSA:1.10.10.60 587 639 2.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 Gene3D G3DSA:1.10.8.60 508 580 2.0E-21 T 22-04-2016 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 620 640 4.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 4.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 PANTHER PTHR32071 325 642 1.6E-130 T 22-04-2016 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 Pfam PF02954 Bacterial regulatory protein, Fis family 596 637 6.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 SMART SM00382 354 498 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 Pfam PF00158 Sigma-54 interaction domain 334 501 1.4E-61 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 548 557 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 Gene3D G3DSA:3.40.50.300 331 506 9.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07200 2f0d8652c94de4f9370927c4e3ac665f 644 SUPERFAMILY SSF52540 333 578 2.88E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 Pfam PF00332 Glycosyl hydrolases family 17 224 305 5.6E-8 T 22-04-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 PANTHER PTHR16631 1 315 2.3E-80 T 22-04-2016 TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 SUPERFAMILY SSF51445 41 305 1.19E-54 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 ProSitePatterns PS00587 Glycosyl hydrolases family 17 signature. 226 239 - T 22-04-2016 IPR000490 Glycoside hydrolase family 17 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.39 TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 Gene3D G3DSA:3.20.20.80 59 306 3.9E-35 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 TMO_RS06820 ebb77a2d0fd8113da9f4f86f1236f537 558 PANTHER PTHR16631:SF5 1 315 2.3E-80 T 22-04-2016 TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.6E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 PANTHER PTHR11751:SF356 16 108 7.3E-25 T 22-04-2016 TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 Gene3D G3DSA:1.20.120.530 85 224 4.4E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 Pfam PF07729 FCD domain 92 214 1.6E-24 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 PANTHER PTHR11751 16 108 7.3E-25 T 22-04-2016 TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 SUPERFAMILY SSF48008 90 218 7.06E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 Gene3D G3DSA:1.10.10.10 17 82 1.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 SUPERFAMILY SSF46785 18 109 2.61E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 SMART SM00895 92 216 1.5E-18 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS06025 230517f2b475c2c645006a1738f36c5a 239 SMART SM00345 24 82 1.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.6E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.6E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.6E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 Pfam PF09278 MerR, DNA binding 44 108 1.8E-20 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 Gene3D G3DSA:1.10.1660.10 56 131 3.5E-32 T 22-04-2016 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 PANTHER PTHR30204:SF16 1 128 1.7E-58 T 22-04-2016 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 4.4E-57 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 Gene3D G3DSA:1.10.1660.10 1 55 2.4E-26 T 22-04-2016 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 PANTHER PTHR30204 1 128 1.7E-58 T 22-04-2016 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 SUPERFAMILY SSF46955 1 126 1.36E-39 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 SMART SM00422 1 70 7.9E-35 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS11295 b10d32cfb64512505a6cb6ed16ea6ffc 165 Pfam PF00376 MerR family regulatory protein 2 39 8.3E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 782 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 724 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 763 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF55874 616 783 5.11E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 SMART SM00387 673 785 7.0E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:3.30.450.20 415 538 9.6E-12 T 22-04-2016 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:3.30.565.10 628 784 4.8E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PANTHER PTHR24423 42 48 3.0E-91 T 22-04-2016 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PANTHER PTHR24423 402 784 3.0E-91 T 22-04-2016 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF00512 His Kinase A (phospho-acceptor) domain 558 627 1.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Gene3D G3DSA:1.10.287.130 553 623 3.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF55785 413 511 7.23E-8 T 22-04-2016 IPR000014 PAS domain TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 673 782 2.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 SUPERFAMILY SSF47384 542 628 3.92E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 SMART SM00388 558 627 1.2E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 Pfam PF12860 PAS fold 429 543 9.3E-23 T 22-04-2016 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PANTHER PTHR24423:SF480 42 48 3.0E-91 T 22-04-2016 TMO_RS29095 0b0fd3da736b27e698ef2f63bd4369b5 800 PANTHER PTHR24423:SF480 402 784 3.0E-91 T 22-04-2016 TMO_RS04335 b735e156263b55eed72769afcd92ad43 147 Pfam PF12728 Helix-turn-helix domain 78 121 1.1E-6 T 22-04-2016 TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 TIGRFAM TIGR00277 HDIG: HDIG domain 111 182 1.8E-7 T 22-04-2016 IPR006675 HDIG domain TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 Gene3D G3DSA:1.10.3210.10 70 303 3.1E-25 T 22-04-2016 IPR006674 HD domain TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 PANTHER PTHR11373:SF4 73 207 6.9E-16 T 22-04-2016 TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 Pfam PF01966 HD domain 112 195 2.2E-12 T 22-04-2016 IPR006674 HD domain TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 SUPERFAMILY SSF109604 70 308 2.98E-31 T 22-04-2016 TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 SMART SM00471 108 271 2.5E-7 T 22-04-2016 IPR003607 HD/PDEase domain TMO_RS29285 ec410ae3e8dfd911874b7eb7a4119809 422 PANTHER PTHR11373 73 207 6.9E-16 T 22-04-2016 TMO_RS15295 20bc42110d587364233a76550c35e395 227 Pfam PF00849 RNA pseudouridylate synthase 17 165 1.8E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS15295 20bc42110d587364233a76550c35e395 227 PANTHER PTHR11079 4 227 1.1E-60 T 22-04-2016 TMO_RS15295 20bc42110d587364233a76550c35e395 227 PANTHER PTHR11079:SF74 4 227 1.1E-60 T 22-04-2016 TMO_RS15295 20bc42110d587364233a76550c35e395 227 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 56 70 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS15295 20bc42110d587364233a76550c35e395 227 SUPERFAMILY SSF55120 3 226 8.16E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS29660 69f613d16383256648fc688456db3467 365 SUPERFAMILY SSF56935 22 365 2.56E-32 T 22-04-2016 TMO_RS29660 69f613d16383256648fc688456db3467 365 Gene3D G3DSA:2.40.160.10 31 365 3.0E-41 T 22-04-2016 IPR023614 Porin domain TMO_RS29660 69f613d16383256648fc688456db3467 365 Pfam PF13609 Gram-negative porin 10 345 3.1E-47 T 22-04-2016 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF52540 145 386 1.05E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF46689 357 476 7.17E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:3.40.50.300 152 317 1.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF00158 Sigma-54 interaction domain 145 311 2.6E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 PANTHER PTHR32071 6 487 4.7E-210 T 22-04-2016 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF02954 Bacterial regulatory protein, Fis family 434 472 1.3E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 474 4.5E-212 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 SMART SM00448 4 115 4.9E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 440 457 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 457 477 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Pfam PF00072 Response regulator receiver domain 6 115 1.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 PANTHER PTHR32071:SF15 6 487 4.7E-210 T 22-04-2016 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:3.40.50.2300 2 151 6.2E-34 T 22-04-2016 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 SMART SM00382 165 308 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 SUPERFAMILY SSF52172 1 189 8.82E-43 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:1.10.8.60 318 392 2.3E-23 T 22-04-2016 TMO_RS08565 0a11ea63b4295f2224afb4cf9ce80122 494 Gene3D G3DSA:1.10.10.60 411 476 1.5E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 Gene3D G3DSA:3.30.950.10 131 259 5.1E-45 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 227 3.4E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 20 34 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 15 252 4.5E-84 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 SUPERFAMILY SSF53790 13 258 5.1E-71 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 PANTHER PTHR21091:SF16 14 246 2.7E-65 T 22-04-2016 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 95 128 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 PANTHER PTHR21091 14 246 2.7E-65 T 22-04-2016 TMO_RS13955 3905943fbd8bd0aecc512ff50bc47117 281 Gene3D G3DSA:3.40.1010.10 14 130 2.4E-40 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 Pfam PF00561 alpha/beta hydrolase fold 26 262 4.2E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 218 234 5.6E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 250 272 5.6E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 PRINTS PR00412 Epoxide hydrolase signature 50 65 5.6E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 Gene3D G3DSA:3.40.50.1820 2 274 2.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 PANTHER PTHR10992 4 275 8.4E-66 T 22-04-2016 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 PANTHER PTHR10992:SF789 4 275 8.4E-66 T 22-04-2016 TMO_RS03440 fc32b8a79bb3bb1922de5725319bd156 302 SUPERFAMILY SSF53474 3 273 5.59E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10180 9c61775cf71d80ba6b4f37b3ee6bc1cc 256 SUPERFAMILY SSF88713 30 166 6.95E-9 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS10180 9c61775cf71d80ba6b4f37b3ee6bc1cc 256 SUPERFAMILY SSF88713 202 242 6.95E-9 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS10180 9c61775cf71d80ba6b4f37b3ee6bc1cc 256 Gene3D G3DSA:3.20.20.370 40 244 1.2E-6 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 Gene3D G3DSA:3.40.1080.10 4 216 3.5E-97 T 22-04-2016 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 SUPERFAMILY SSF100950 11 229 1.49E-85 T 22-04-2016 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 PANTHER PTHR13707 4 233 6.2E-135 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 3 217 2.2E-77 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 Pfam PF01144 Coenzyme A transferase 9 216 3.6E-76 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS15920 839e49faf39720d26e1abfc33e18ec9f 236 SMART SM00882 6 218 3.0E-88 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 Pfam PF00694 Aconitase C-terminal domain 1 123 3.4E-36 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 SUPERFAMILY SSF52016 1 193 3.92E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 Gene3D G3DSA:3.20.19.10 1 194 1.7E-45 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 201 39.713 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 PANTHER PTHR11670:SF38 1 199 9.4E-94 T 22-04-2016 TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 187 1.5E-76 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS16405 0af629d9b6933d56e74e79e5dd7c26f1 205 PANTHER PTHR11670 1 199 9.4E-94 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS10765 767884cf1d403c2a552c36ece9f5d54f 275 Pfam PF04454 Encapsulating protein for peroxidase 1 251 3.5E-67 T 22-04-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS10765 767884cf1d403c2a552c36ece9f5d54f 275 PANTHER PTHR37165:SF1 1 267 1.3E-20 T 22-04-2016 TMO_RS10765 767884cf1d403c2a552c36ece9f5d54f 275 PANTHER PTHR37165 1 267 1.3E-20 T 22-04-2016 TMO_RS10765 767884cf1d403c2a552c36ece9f5d54f 275 PIRSF PIRSF019254 1 266 2.6E-67 T 22-04-2016 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS12680 ca2dc418955f8ee946ee573f2baf065d 581 Gene3D G3DSA:3.60.20.10 113 215 4.3E-7 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS12680 ca2dc418955f8ee946ee573f2baf065d 581 SUPERFAMILY SSF56235 110 214 3.7E-6 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS09340 3e903c288184203f9111fc19a398a332 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 180 1.4E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS09340 3e903c288184203f9111fc19a398a332 656 SUPERFAMILY SSF56935 46 656 4.58E-120 T 22-04-2016 TMO_RS09340 3e903c288184203f9111fc19a398a332 656 PANTHER PTHR32552 1 656 9.1E-54 T 22-04-2016 TMO_RS09340 3e903c288184203f9111fc19a398a332 656 Pfam PF00593 TonB dependent receptor 423 654 6.5E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS09340 3e903c288184203f9111fc19a398a332 656 Gene3D G3DSA:2.170.130.10 54 185 3.8E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS09340 3e903c288184203f9111fc19a398a332 656 Gene3D G3DSA:2.40.170.20 186 656 2.0E-84 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 105 416 1.7E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 298 314 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 127 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 268 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 357 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 214 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 159 169 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 153 3.7E-33 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 205 223 1.9E-20 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 402 1.9E-20 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 334 350 1.9E-20 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 266 1.9E-20 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 125 1.9E-20 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PANTHER PTHR22912 89 367 2.1E-128 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PANTHER PTHR22912 387 427 2.1E-128 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 SUPERFAMILY SSF51905 96 425 3.79E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 Gene3D G3DSA:3.50.50.60 209 421 9.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 Gene3D G3DSA:3.50.50.60 103 208 6.8E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PANTHER PTHR22912:SF138 89 367 2.1E-128 T 22-04-2016 TMO_RS11005 2b0d6673b41f17914d10dd74af9f8c66 431 PANTHER PTHR22912:SF138 387 427 2.1E-128 T 22-04-2016 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 4 442 35.646 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 PANTHER PTHR11806 4 439 4.1E-214 T 22-04-2016 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 Gene3D G3DSA:3.50.50.60 4 154 4.0E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 Gene3D G3DSA:3.50.50.60 330 382 4.0E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 SUPERFAMILY SSF51905 3 375 1.15E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 PANTHER PTHR11806:SF2 4 439 4.1E-214 T 22-04-2016 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 3 440 2.4E-182 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 Pfam PF01134 Glucose inhibited division protein A 4 376 5.2E-107 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 TMO_RS07815 ce7603b5731c645e5864729f8e2387eb 447 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 345 368 - T 22-04-2016 IPR020595 MnmG-related, conserved site TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 Gene3D G3DSA:3.40.47.10 9 50 1.3E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 Gene3D G3DSA:3.40.47.10 129 243 1.3E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 ProSitePatterns PS00737 Thiolases signature 2. 191 207 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 SUPERFAMILY SSF53901 11 122 6.91E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 Pfam PF02803 Thiolase, C-terminal domain 123 243 1.2E-42 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 Gene3D G3DSA:3.40.47.10 51 127 9.2E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 Pfam PF00108 Thiolase, N-terminal domain 9 115 3.3E-34 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 243 1.7E-87 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 PANTHER PTHR18919 11 245 1.3E-107 T 22-04-2016 TMO_RS12115 59a89139afac99e6e2914f32a9300fc3 245 SUPERFAMILY SSF53901 124 243 1.19E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 SMART SM00829 9 323 2.3E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 SUPERFAMILY SSF50129 2 146 2.43E-43 T 22-04-2016 IPR011032 GroES-like TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 325 8.2E-135 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 Gene3D G3DSA:3.90.180.10 4 87 7.5E-8 T 22-04-2016 IPR011032 GroES-like TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 Gene3D G3DSA:3.40.50.720 126 291 2.7E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 SUPERFAMILY SSF51735 118 289 1.28E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 Pfam PF00107 Zinc-binding dehydrogenase 159 268 8.3E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 PANTHER PTHR11695:SF13 16 326 1.2E-151 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 7.0E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS07505 060f6289c3ba6852cdd783c7f21a8b5e 330 PANTHER PTHR11695 16 326 1.2E-151 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 PANTHER PTHR37418 13 127 1.4E-80 T 22-04-2016 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 PANTHER PTHR37418 150 315 1.4E-80 T 22-04-2016 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 Gene3D G3DSA:3.20.20.70 14 314 4.7E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 PANTHER PTHR37418:SF2 13 127 1.4E-80 T 22-04-2016 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 PANTHER PTHR37418:SF2 150 315 1.4E-80 T 22-04-2016 TMO_RS14410 0eafe26a5d8ecf175a8cb51a91481a39 323 Pfam PF05853 beta-keto acid cleavage enzyme 15 312 1.0E-102 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 Pfam PF01180 Dihydroorotate dehydrogenase 50 343 2.0E-90 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 4 340 41.031 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 11 358 4.0E-110 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 Gene3D G3DSA:3.20.20.70 9 359 1.7E-124 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 PANTHER PTHR11938 45 357 2.9E-97 T 22-04-2016 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 SUPERFAMILY SSF51395 9 359 6.11E-98 T 22-04-2016 TMO_RS16765 3d5702b1b004b384908edf6be54b8cff 360 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 296 316 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PANTHER PTHR30534:SF0 1 338 2.4E-87 T 22-04-2016 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 201 338 1.4E-40 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PIRSF PIRSF003161 5 339 7.5E-111 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 SUPERFAMILY SSF48029 13 121 1.24E-19 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 7 339 1.7E-78 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PANTHER PTHR30534 1 338 2.4E-87 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 120 143 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 2.4E-60 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF14842 FliG N-terminal domain 11 113 5.9E-26 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF14841 FliG middle domain 122 194 5.1E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 110 195 1.3E-24 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Gene3D G3DSA:1.10.220.30 13 75 8.4E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 Pfam PF01706 FliG C-terminal domain 223 329 4.5E-39 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal TMO_RS06275 ff0521fbdfedb769b3966f2f6beb2fc9 340 SUPERFAMILY SSF48029 122 330 3.66E-62 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 SMART SM00382 26 223 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 SMART SM00382 338 505 6.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 SUPERFAMILY SSF52540 2 81 8.04E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 SUPERFAMILY SSF52540 119 243 8.04E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 Pfam PF12848 ABC transporter 218 292 3.6E-25 T 22-04-2016 IPR032781 ABC-transporter extension domain TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 Gene3D G3DSA:3.40.50.300 1 265 9.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 Gene3D G3DSA:3.40.50.300 311 518 1.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 PANTHER PTHR19211 1 556 2.3E-252 T 22-04-2016 TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 Pfam PF00005 ABC transporter 329 460 2.7E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 Pfam PF00005 ABC transporter 19 178 2.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09270 22c37004028eb563cba0f5e5ba078977 637 SUPERFAMILY SSF52540 298 510 7.39E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 80 6.0E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 PANTHER PTHR11260 2 204 3.3E-58 T 22-04-2016 TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 SUPERFAMILY SSF47616 89 204 1.95E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 Gene3D G3DSA:1.20.1050.10 89 202 6.6E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 Gene3D G3DSA:3.40.30.10 2 83 1.1E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 194 1.7E-11 T 22-04-2016 TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 SUPERFAMILY SSF52833 2 83 7.63E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05765 23760ea99974c169389fcbbe7b9783a3 234 PANTHER PTHR11260:SF157 2 204 3.3E-58 T 22-04-2016 TMO_RS10995 08a050e537bd38c13ab628783f334c41 262 PANTHER PTHR13887:SF10 30 252 2.3E-50 T 22-04-2016 TMO_RS10995 08a050e537bd38c13ab628783f334c41 262 Pfam PF01323 DSBA-like thioredoxin domain 34 238 2.3E-36 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 TMO_RS10995 08a050e537bd38c13ab628783f334c41 262 SUPERFAMILY SSF52833 32 246 1.33E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10995 08a050e537bd38c13ab628783f334c41 262 PANTHER PTHR13887 30 252 2.3E-50 T 22-04-2016 TMO_RS10995 08a050e537bd38c13ab628783f334c41 262 Gene3D G3DSA:3.40.30.10 33 240 1.3E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05955 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 PANTHER PTHR30465:SF0 1 304 2.0E-92 T 22-04-2016 TMO_RS05955 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 Gene3D G3DSA:1.10.3720.10 90 301 1.6E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05955 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.0E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05955 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 PANTHER PTHR30465 1 304 2.0E-92 T 22-04-2016 TMO_RS05955 16ed9fd0a8c9d158d51f3af3cd9d0a0a 312 SUPERFAMILY SSF161098 90 286 1.11E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52540 551 828 1.68E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52540 346 521 1.68E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52540 865 889 1.68E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52540 114 197 1.68E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52540 13 75 1.68E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 SUPERFAMILY SSF52980 997 1133 2.84E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 11 84 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 321 427 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 114 197 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 864 885 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 569 837 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070 446 546 1.8E-91 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:3.40.50.300 13 71 2.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:3.40.50.300 122 184 2.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:3.40.50.300 356 479 2.0E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Pfam PF13361 UvrD-like helicase C-terminal domain 754 885 5.8E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:3.40.50.300 496 631 3.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:3.40.50.300 790 907 3.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Gene3D G3DSA:1.10.486.10 642 781 2.7E-14 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Pfam PF12705 PD-(D/E)XK nuclease superfamily 996 1132 5.1E-8 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 11 84 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 321 427 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 114 197 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 864 885 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 569 837 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 PANTHER PTHR11070:SF23 446 546 1.8E-91 T 22-04-2016 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 476 2.5E-47 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 TMO_RS16350 21f5e759c6d7d49afce1e1cd91f4a594 1171 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 12 1149 0.0 T 22-04-2016 IPR014151 DNA helicase, AddA type TMO_RS12415 b349c512db3ddf892e10bc3281395357 342 Gene3D G3DSA:3.20.20.100 9 326 1.3E-93 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS12415 b349c512db3ddf892e10bc3281395357 342 PANTHER PTHR11732 1 328 2.2E-117 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS12415 b349c512db3ddf892e10bc3281395357 342 Pfam PF00248 Aldo/keto reductase family 16 316 1.4E-68 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS12415 b349c512db3ddf892e10bc3281395357 342 SUPERFAMILY SSF51430 1 316 1.44E-93 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 PANTHER PTHR30290:SF14 19 515 1.0E-146 T 22-04-2016 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 SUPERFAMILY SSF53850 23 514 2.35E-135 T 22-04-2016 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 PIRSF PIRSF002741 10 515 2.1E-133 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 Gene3D G3DSA:3.10.105.10 289 482 2.3E-51 T 22-04-2016 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 PANTHER PTHR30290 19 515 1.0E-146 T 22-04-2016 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 Gene3D G3DSA:3.90.76.10 40 183 9.9E-47 T 22-04-2016 TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 420 5.8E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS01385 ea6c22a0299bf288a50b3dd87af9da5c 515 Gene3D G3DSA:3.40.190.10 184 288 4.8E-32 T 22-04-2016 TMO_RS08865 c56a2ccb837f70e2703a02f20cfa77f1 715 Pfam PF13567 Domain of unknown function (DUF4131) 55 208 2.3E-13 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 TMO_RS08865 c56a2ccb837f70e2703a02f20cfa77f1 715 PANTHER PTHR30619 37 587 3.8E-64 T 22-04-2016 TMO_RS08865 c56a2ccb837f70e2703a02f20cfa77f1 715 Pfam PF03772 Competence protein 256 544 9.0E-58 T 22-04-2016 IPR004477 ComEC/Rec2-related protein TMO_RS08865 c56a2ccb837f70e2703a02f20cfa77f1 715 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 277 473 2.4E-21 T 22-04-2016 IPR004477 ComEC/Rec2-related protein TMO_RS08865 c56a2ccb837f70e2703a02f20cfa77f1 715 PANTHER PTHR30619:SF2 37 587 3.8E-64 T 22-04-2016 TMO_RS11075 a3d744019698acebec88d73b462d8136 666 PANTHER PTHR37937 9 567 1.2E-113 T 22-04-2016 TMO_RS11075 a3d744019698acebec88d73b462d8136 666 PANTHER PTHR37937:SF1 9 567 1.2E-113 T 22-04-2016 TMO_RS11075 a3d744019698acebec88d73b462d8136 666 SUPERFAMILY SSF52540 107 550 2.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11075 a3d744019698acebec88d73b462d8136 666 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 553 4.4E-102 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 TMO_RS11075 a3d744019698acebec88d73b462d8136 666 Gene3D G3DSA:3.40.50.300 347 548 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11075 a3d744019698acebec88d73b462d8136 666 Gene3D G3DSA:3.40.50.300 104 209 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06040 5b1b762a3680110374884293912b74ba 227 PANTHER PTHR19136 1 218 1.1E-16 T 22-04-2016 TMO_RS06040 5b1b762a3680110374884293912b74ba 227 SUPERFAMILY SSF53448 7 217 2.25E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS06040 5b1b762a3680110374884293912b74ba 227 Gene3D G3DSA:3.90.550.10 4 224 6.3E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS06040 5b1b762a3680110374884293912b74ba 227 PANTHER PTHR19136:SF81 1 218 1.1E-16 T 22-04-2016 TMO_RS06040 5b1b762a3680110374884293912b74ba 227 Pfam PF12804 MobA-like NTP transferase domain 9 172 2.8E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase TMO_RS06040 5b1b762a3680110374884293912b74ba 227 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 220 21.67 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 TMO_RS10200 7dbc40e55d5f2c10d1c95b5c170e1dca 332 Gene3D G3DSA:1.10.3720.10 95 316 9.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10200 7dbc40e55d5f2c10d1c95b5c170e1dca 332 PANTHER PTHR30465 1 326 4.6E-141 T 22-04-2016 TMO_RS10200 7dbc40e55d5f2c10d1c95b5c170e1dca 332 SUPERFAMILY SSF161098 99 308 3.6E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10200 7dbc40e55d5f2c10d1c95b5c170e1dca 332 PANTHER PTHR30465:SF43 1 326 4.6E-141 T 22-04-2016 TMO_RS10200 7dbc40e55d5f2c10d1c95b5c170e1dca 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 325 3.1E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 104 4.4E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 Pfam PF00037 4Fe-4S binding domain 34 56 3.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 Gene3D G3DSA:3.30.70.20 3 86 7.2E-21 T 22-04-2016 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 PANTHER PTHR11938 1 82 1.2E-35 T 22-04-2016 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 7.5E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 7.5E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 7.5E-19 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 SUPERFAMILY SSF54862 3 107 1.75E-23 T 22-04-2016 TMO_RS15405 ecd1d04c879170b4caa25077bdd5342f 112 PANTHER PTHR11938:SF101 1 82 1.2E-35 T 22-04-2016 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 263 278 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 219 2.0E-61 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 SUPERFAMILY SSF53448 1 218 4.28E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 221 26.262 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Gene3D G3DSA:3.30.1330.50 230 382 2.0E-62 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 232 382 2.7E-56 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 PANTHER PTHR32125 1 233 2.7E-57 T 22-04-2016 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Pfam PF02542 YgbB family 231 382 1.1E-55 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 1 385 41.418 T 22-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 SUPERFAMILY SSF69765 230 384 3.01E-58 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 229 384 31.12 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 Gene3D G3DSA:3.90.550.10 1 222 1.1E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 PANTHER PTHR32125:SF4 1 233 2.7E-57 T 22-04-2016 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 217 1.2E-66 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS08580 f724cb8b7abfd75215281028ef1edbb1 394 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 94 101 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 PANTHER PTHR24220 6 389 8.6E-245 T 22-04-2016 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF12698 ABC-2 family transporter protein 565 899 1.3E-36 T 22-04-2016 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 SUPERFAMILY SSF52540 269 490 8.88E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 SMART SM00382 29 217 4.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 SMART SM00382 294 485 1.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 Gene3D G3DSA:3.40.50.300 263 492 1.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 Gene3D G3DSA:3.40.50.300 2 234 8.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 SUPERFAMILY SSF52540 4 231 8.77E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 PANTHER PTHR24220:SF388 6 389 8.6E-245 T 22-04-2016 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF00005 ABC transporter 286 429 7.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10855 1e7b329d3b8877336b20402f2f203f3e 909 Pfam PF00005 ABC transporter 20 167 1.9E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 17 329 4.0E-104 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 Pfam PF01467 Cytidylyltransferase-like 373 464 1.2E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 370 435 1.8E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 SUPERFAMILY SSF52374 369 497 6.7E-22 T 22-04-2016 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 360 500 3.9E-55 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 Pfam PF00294 pfkB family carbohydrate kinase 21 323 1.5E-37 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 Hamap MF_01603 Bifunctional protein HldE [hldE]. 13 502 38.993 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 Gene3D G3DSA:3.40.50.620 369 488 3.7E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 Gene3D G3DSA:3.40.1190.20 22 330 1.2E-57 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 275 288 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 PANTHER PTHR10584 3 355 3.8E-99 T 22-04-2016 TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 SUPERFAMILY SSF53613 21 327 1.71E-50 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS03455 33b751bddd93ee90331c04d24c1dcd3c 504 PANTHER PTHR10584:SF159 3 355 3.8E-99 T 22-04-2016 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 PANTHER PTHR11709 230 479 2.1E-48 T 22-04-2016 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 PANTHER PTHR11709 68 209 2.1E-48 T 22-04-2016 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 33 155 4.1E-17 T 22-04-2016 IPR008972 Cupredoxin TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 354 479 1.12E-38 T 22-04-2016 IPR008972 Cupredoxin TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 372 478 6.9E-38 T 22-04-2016 IPR008972 Cupredoxin TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF07732 Multicopper oxidase 65 153 2.8E-14 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF07731 Multicopper oxidase 370 479 7.0E-31 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Pfam PF00394 Multicopper oxidase 213 302 3.3E-10 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 ProSitePatterns PS00079 Multicopper oxidases signature 1. 458 478 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 160 307 1.83E-16 T 22-04-2016 IPR008972 Cupredoxin TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 PANTHER PTHR11709:SF33 230 479 2.1E-48 T 22-04-2016 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 PANTHER PTHR11709:SF33 68 209 2.1E-48 T 22-04-2016 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 SUPERFAMILY SSF49503 32 155 2.89E-18 T 22-04-2016 IPR008972 Cupredoxin TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 ProSitePatterns PS00080 Multicopper oxidases signature 2. 463 474 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_RS15085 5cc75d1d5b09947ba4ab9566c6c1b87c 481 Gene3D G3DSA:2.60.40.420 161 345 1.1E-24 T 22-04-2016 IPR008972 Cupredoxin TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 PANTHER PTHR11699:SF188 1 487 4.0E-275 T 22-04-2016 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 Gene3D G3DSA:3.40.309.10 262 443 4.1E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 7.3E-206 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 Pfam PF00171 Aldehyde dehydrogenase family 16 477 1.3E-137 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 SUPERFAMILY SSF53720 2 482 1.57E-146 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 PANTHER PTHR11699 1 487 4.0E-275 T 22-04-2016 TMO_RS06910 b71f4d0ec34355e5e3f00ffaf63296a4 498 Gene3D G3DSA:3.40.605.10 4 261 1.3E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:2.30.120.10 353 400 1.4E-4 T 22-04-2016 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 Pfam PF01804 Penicillin amidase 64 772 5.5E-141 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 PANTHER PTHR34218 60 785 3.6E-99 T 22-04-2016 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 PIRSF PIRSF001227 47 784 4.1E-106 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 SUPERFAMILY SSF56235 61 783 5.66E-134 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:1.10.439.10 61 201 3.0E-32 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 PANTHER PTHR34218:SF2 60 785 3.6E-99 T 22-04-2016 TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:3.60.20.10 410 614 5.3E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS10695 0f6248ef14adcb149329d91909455b5e 785 Gene3D G3DSA:3.60.20.10 266 344 5.3E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 Gene3D G3DSA:1.10.10.10 1 62 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 SUPERFAMILY SSF46785 1 61 2.8E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 PANTHER PTHR34580:SF3 1 219 7.7E-41 T 22-04-2016 TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 Pfam PF13280 WYL domain 135 219 1.0E-16 T 22-04-2016 IPR026881 WYL domain TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 Pfam PF08279 HTH domain 6 58 1.2E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 TMO_RS06460 f3e96ed7cbba0c5b99513ec239b05acf 230 PANTHER PTHR34580 1 219 7.7E-41 T 22-04-2016 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 Pfam PF01012 Electron transfer flavoprotein domain 29 203 7.0E-48 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 PANTHER PTHR21294:SF8 1 249 1.8E-157 T 22-04-2016 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 PANTHER PTHR21294 1 249 1.8E-157 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 SMART SM00893 23 211 4.0E-72 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 SUPERFAMILY SSF52402 1 242 5.23E-87 T 22-04-2016 TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 Gene3D G3DSA:3.40.50.620 1 246 3.4E-107 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS00640 e8c092f04f2338d47fe33a689fe8da81 249 PIRSF PIRSF000090 1 249 1.3E-87 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 TMO_RS03865 f8068e36275bdc73bf6a613c8fff74fa 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 23 370 7.7E-126 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 TMO_RS03865 f8068e36275bdc73bf6a613c8fff74fa 383 PANTHER PTHR30474 1 371 2.1E-129 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 TMO_RS03865 f8068e36275bdc73bf6a613c8fff74fa 383 PANTHER PTHR30474:SF1 1 371 2.1E-129 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 TMO_RS03865 f8068e36275bdc73bf6a613c8fff74fa 383 Pfam PF01098 Cell cycle protein 27 370 1.5E-95 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 Gene3D G3DSA:3.40.50.720 10 241 3.7E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PIRSF PIRSF000126 6 249 1.5E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.1E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.1E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.1E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.1E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 SUPERFAMILY SSF51735 9 235 7.02E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 185 0.0021 T 22-04-2016 TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 Pfam PF00106 short chain dehydrogenase 13 200 2.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PANTHER PTHR24319:SF32 12 244 7.8E-56 T 22-04-2016 TMO_RS06480 ab2b1967bbc60386e11c2c931b69ae28 250 PANTHER PTHR24319 12 244 7.8E-56 T 22-04-2016 TMO_RS04140 3a98dca5da963824aea95f32747d107e 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 123 5.7E-4 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS04140 3a98dca5da963824aea95f32747d107e 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 46 8.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS04140 3a98dca5da963824aea95f32747d107e 201 Gene3D G3DSA:2.160.10.10 4 166 5.6E-38 T 22-04-2016 TMO_RS04140 3a98dca5da963824aea95f32747d107e 201 SUPERFAMILY SSF51161 4 163 3.74E-38 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS04140 3a98dca5da963824aea95f32747d107e 201 PANTHER PTHR13061 1 163 1.4E-50 T 22-04-2016 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SMART SM00534 654 841 2.3E-107 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.40.1170.10 19 143 2.1E-50 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF00488 MutS domain V 657 843 8.4E-83 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05192 MutS domain III 295 593 5.3E-37 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 24 909 23.552 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 PIRSF PIRSF037677 15 854 3.3E-149 T 22-04-2016 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:1.10.1420.10 290 500 1.4E-46 T 22-04-2016 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05188 MutS domain II 153 278 7.0E-24 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.40.50.300 601 844 1.1E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 735 751 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 25 914 5.3E-253 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF05190 MutS family domain IV 461 551 5.3E-23 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SMART SM00533 309 625 1.2E-74 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Pfam PF01624 MutS domain I 25 142 2.3E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 PANTHER PTHR11361 3 847 0.0 T 22-04-2016 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF48334 293 599 5.1E-74 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF53150 140 306 1.31E-37 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF52540 601 844 1.01E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 PANTHER PTHR11361:SF86 3 847 0.0 T 22-04-2016 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 Gene3D G3DSA:3.30.420.110 150 281 2.9E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 TMO_RS17625 a4bed916f1a56e340dfc8d1bf6746d6c 937 SUPERFAMILY SSF55271 18 138 8.5E-41 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PANTHER PTHR11353 2 548 6.9E-272 T 22-04-2016 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 8.7E-102 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 528 4.6E-265 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF52029 185 376 7.33E-87 T 22-04-2016 IPR027409 GroEL-like apical domain TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:1.10.560.10 3 188 6.7E-47 T 22-04-2016 IPR027413 GroEL-like equatorial domain TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:1.10.560.10 367 519 2.3E-44 T 22-04-2016 IPR027413 GroEL-like equatorial domain TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF54849 137 206 3.66E-24 T 22-04-2016 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF48592 6 134 3.66E-78 T 22-04-2016 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 SUPERFAMILY SSF48592 406 522 3.66E-78 T 22-04-2016 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 Gene3D G3DSA:3.50.7.10 189 366 8.6E-103 T 22-04-2016 IPR027409 GroEL-like apical domain TMO_RS08525 9777e7666622c95caa89369c8579aa2d 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.932 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.069 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:1.10.10.200 1 80 2.2E-34 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 SUPERFAMILY SSF75625 3 246 1.57E-92 T 22-04-2016 IPR029072 YebC-like TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Pfam PF01709 Transcriptional regulator 5 237 3.6E-91 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:3.30.1270.10 212 247 1.0E-39 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:3.30.1270.10 82 134 1.0E-39 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 Gene3D G3DSA:3.30.70.980 135 203 2.9E-20 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 PANTHER PTHR12532 1 241 6.1E-106 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like TMO_RS04520 aef9170ec089508ad5506091e0df8342 249 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.6E-99 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 123 133 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 16 157 21.547 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 PANTHER PTHR22881 34 160 7.4E-41 T 22-04-2016 TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 Gene3D G3DSA:3.40.390.30 20 161 7.0E-41 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 34 153 3.6E-33 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 Pfam PF02130 Uncharacterized protein family UPF0054 29 151 3.0E-32 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 TMO_RS17795 8a22ef637061058489b8d0e69a5baae5 169 SUPERFAMILY SSF55486 23 159 3.66E-38 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 74 91 1.6E-19 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 30 48 1.6E-19 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 61 74 1.6E-19 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 285 304 1.6E-19 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00690 Adhesin family signature 259 277 1.6E-19 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 255 272 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 298 316 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 74 93 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 55 73 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 30 51 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PRINTS PR00691 Adhesin B signature 277 295 3.5E-18 T 22-04-2016 IPR006129 Adhesin B GO:0007155 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 SUPERFAMILY SSF53807 26 319 3.14E-92 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 Gene3D G3DSA:3.40.50.1980 26 198 1.1E-54 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 317 2.6E-86 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 Gene3D G3DSA:3.40.50.1980 199 319 9.1E-46 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PANTHER PTHR30477 136 319 5.7E-86 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PANTHER PTHR30477 1 119 5.7E-86 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PANTHER PTHR30477:SF16 136 319 5.7E-86 T 22-04-2016 TMO_RS06455 364153273c2bbc69e19e8de4b91b0f14 321 PANTHER PTHR30477:SF16 1 119 5.7E-86 T 22-04-2016 TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 PANTHER PTHR11717:SF18 17 153 1.3E-24 T 22-04-2016 TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 SMART SM00226 20 155 4.7E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 22 150 1.8E-13 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 PANTHER PTHR11717 17 153 1.3E-24 T 22-04-2016 TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 SUPERFAMILY SSF52788 21 152 4.19E-33 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS05055 ab1bd5513dc4567afb9af4c228d2b766 161 Gene3D G3DSA:3.40.50.270 19 152 3.2E-28 T 22-04-2016 TMO_RS09835 2bd01bfa85fdf4c21e29cb31e54c3229 395 Gene3D G3DSA:1.20.1250.20 6 190 6.5E-24 T 22-04-2016 TMO_RS09835 2bd01bfa85fdf4c21e29cb31e54c3229 395 Pfam PF07690 Major Facilitator Superfamily 20 247 1.7E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS09835 2bd01bfa85fdf4c21e29cb31e54c3229 395 Gene3D G3DSA:1.20.1250.20 203 387 4.3E-12 T 22-04-2016 TMO_RS09835 2bd01bfa85fdf4c21e29cb31e54c3229 395 PANTHER PTHR23501 20 390 1.0E-22 T 22-04-2016 TMO_RS09835 2bd01bfa85fdf4c21e29cb31e54c3229 395 SUPERFAMILY SSF103473 4 388 3.27E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.1E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 SMART SM00382 29 237 6.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 PANTHER PTHR24220:SF491 127 254 1.4E-106 T 22-04-2016 TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 PANTHER PTHR24220:SF491 6 111 1.4E-106 T 22-04-2016 TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 Gene3D G3DSA:3.40.50.300 2 249 5.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 PANTHER PTHR24220 127 254 1.4E-106 T 22-04-2016 TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 PANTHER PTHR24220 6 111 1.4E-106 T 22-04-2016 TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 Pfam PF00005 ABC transporter 22 180 9.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15590 fc3b7a620c2ff83a796a24d289353e68 258 SUPERFAMILY SSF52540 4 251 3.26E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Pfam PF01568 Molydopterin dinucleotide binding domain 6 60 1.6E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 SUPERFAMILY SSF50692 4 63 9.49E-10 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 PANTHER PTHR11938 294 309 6.3E-28 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 PANTHER PTHR11938 325 352 6.3E-28 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 PANTHER PTHR11938 156 271 6.3E-28 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:2.40.40.20 3 62 4.2E-10 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:3.30.70.20 155 223 5.1E-42 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:3.30.70.20 295 377 5.1E-42 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Gene3D G3DSA:3.30.70.20 224 273 1.3E-14 T 22-04-2016 TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Pfam PF12838 4Fe-4S dicluster domain 251 339 6.0E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 Pfam PF12838 4Fe-4S dicluster domain 165 236 7.9E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS29215 362663401956ab4fb372e8a630ff3af6 401 SUPERFAMILY SSF54862 155 377 6.38E-50 T 22-04-2016 TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 Gene3D G3DSA:3.40.50.720 1 223 2.8E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 SUPERFAMILY SSF51735 1 251 4.25E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.7E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.7E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.7E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PANTHER PTHR24322 155 186 9.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PANTHER PTHR24322 10 139 9.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 Pfam PF00106 short chain dehydrogenase 6 195 1.2E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 1.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PANTHER PTHR24322:SF329 155 186 9.7E-42 T 22-04-2016 TMO_RS06525 ed5bb4fe7ea1bba810b6bb2aa0facdcd 264 PANTHER PTHR24322:SF329 10 139 9.7E-42 T 22-04-2016 TMO_RS04330 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 Gene3D G3DSA:3.40.50.1820 26 263 2.4E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04330 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 PANTHER PTHR10992 31 268 3.0E-23 T 22-04-2016 TMO_RS04330 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 PANTHER PTHR10992:SF771 31 268 3.0E-23 T 22-04-2016 TMO_RS04330 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 SUPERFAMILY SSF53474 16 263 4.95E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04330 d6e8d88d5b2fd79bd09ab5e38a8a0d57 273 Pfam PF12697 Alpha/beta hydrolase family 36 259 1.5E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 9 292 37.461 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 SUPERFAMILY SSF53335 28 275 3.92E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 288 5.4E-73 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 Gene3D G3DSA:1.10.8.10 11 92 9.4E-20 T 22-04-2016 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 269 3.2E-47 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 Gene3D G3DSA:3.40.50.150 95 291 1.7E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 PANTHER PTHR18895 30 291 3.5E-69 T 22-04-2016 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 PANTHER PTHR18895:SF64 30 291 3.5E-69 T 22-04-2016 TMO_RS01935 b9d5c6d558145887edc01fbe3ebbc76d 298 Pfam PF05175 Methyltransferase small domain 126 204 2.8E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 3 257 1.0E-90 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 PANTHER PTHR22572 3 251 2.1E-100 T 22-04-2016 TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 SUPERFAMILY SSF53448 3 257 1.85E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 Pfam PF00483 Nucleotidyl transferase 5 202 2.7E-16 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 Gene3D G3DSA:3.90.550.10 4 256 2.9E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03610 f68b7e614d6460c7afde99a09542c865 260 PANTHER PTHR22572:SF16 3 251 2.1E-100 T 22-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 SMART SM00100 13 133 5.3E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 Pfam PF00027 Cyclic nucleotide-binding domain 36 120 2.0E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 Gene3D G3DSA:2.60.120.10 8 147 1.6E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 Gene3D G3DSA:1.10.10.10 152 231 3.1E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 SMART SM00419 174 222 2.4E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 SUPERFAMILY SSF51206 8 146 1.06E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 195 211 3.7E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 181 195 3.7E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 SUPERFAMILY SSF46785 153 230 8.44E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 Pfam PF13545 Crp-like helix-turn-helix domain 153 228 3.1E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 PANTHER PTHR24567 1 234 7.6E-34 T 22-04-2016 TMO_RS15095 8a040ab2d295c8018f1d87655f9a1b2e 241 PANTHER PTHR24567:SF30 1 234 7.6E-34 T 22-04-2016 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 PANTHER PTHR11846 3 427 1.2E-218 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 SUPERFAMILY SSF52540 1 428 4.89E-169 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Gene3D G3DSA:3.90.170.10 266 424 1.2E-66 T 22-04-2016 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Gene3D G3DSA:1.10.300.10 102 195 1.8E-31 T 22-04-2016 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 206.803 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Gene3D G3DSA:3.40.440.10 1 92 1.1E-67 T 22-04-2016 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Gene3D G3DSA:3.40.440.10 196 265 1.1E-67 T 22-04-2016 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 SMART SM00788 3 423 5.6E-281 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 428 2.1E-154 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS04635 e7d2e79b33bcd000f64d693b9296dbf2 430 Pfam PF00709 Adenylosuccinate synthetase 4 422 2.2E-168 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 SUPERFAMILY SSF52540 11 201 2.31E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 201 4.1E-71 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 PANTHER PTHR30069 8 201 6.6E-60 T 22-04-2016 TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 PIRSF PIRSF015617 4 201 1.8E-72 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 30 201 3.9E-63 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 Gene3D G3DSA:3.40.50.300 6 201 1.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13905 275d13043b880e27bfb70acf0f64c8db 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 24 5.3E-6 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 Gene3D G3DSA:3.60.90.10 2 118 3.0E-43 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 1.3E-42 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 30.728 T 22-04-2016 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 PANTHER PTHR33866 2 113 1.8E-47 T 22-04-2016 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 SUPERFAMILY SSF56276 3 114 4.51E-40 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 PANTHER PTHR33866:SF2 2 113 1.8E-47 T 22-04-2016 TMO_RS08140 3c706a60d6b1b4316859b20596890d94 133 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 7.6E-37 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 TMO_RS05290 d77e5cae8e674035dbc633ccf688b2b2 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 182 4.0E-18 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS05290 d77e5cae8e674035dbc633ccf688b2b2 190 SMART SM00855 7 146 5.8E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS05290 d77e5cae8e674035dbc633ccf688b2b2 190 SUPERFAMILY SSF53254 5 175 4.91E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS05290 d77e5cae8e674035dbc633ccf688b2b2 190 Gene3D G3DSA:3.40.50.1240 7 173 1.4E-20 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 PANTHER PTHR33164 17 133 2.1E-26 T 22-04-2016 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 1.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 1.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 1.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 SUPERFAMILY SSF46785 13 147 6.21E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 PANTHER PTHR33164:SF1 17 133 2.1E-26 T 22-04-2016 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 Pfam PF01047 MarR family 44 100 1.6E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 Gene3D G3DSA:1.10.10.10 11 147 5.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03760 61ec8abeff9f6ccf59be16928a1e3150 157 SMART SM00347 37 140 2.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12700 3d8e000d0ef5830a05044849cce4833d 306 SUPERFAMILY SSF54506 21 283 7.46E-14 T 22-04-2016 TMO_RS12700 3d8e000d0ef5830a05044849cce4833d 306 Gene3D G3DSA:3.10.310.10 121 279 3.7E-15 T 22-04-2016 TMO_RS04945 260917a6e72e10cfdb16154cb42d5dfd 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 34 289 3.9E-21 T 22-04-2016 IPR017039 Virulence factor BrkB TMO_RS04945 260917a6e72e10cfdb16154cb42d5dfd 317 PANTHER PTHR30213 1 309 1.4E-46 T 22-04-2016 TMO_RS04945 260917a6e72e10cfdb16154cb42d5dfd 317 Pfam PF03631 Virulence factor BrkB 38 292 2.9E-51 T 22-04-2016 IPR017039 Virulence factor BrkB TMO_RS04945 260917a6e72e10cfdb16154cb42d5dfd 317 PIRSF PIRSF035875 16 312 7.4E-55 T 22-04-2016 IPR017039 Virulence factor BrkB TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 SUPERFAMILY SSF52540 10 248 5.67E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 10 250 4.1E-96 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 Gene3D G3DSA:3.40.50.300 10 248 3.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 PANTHER PTHR24220:SF366 12 249 6.2E-99 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 227 249 2.2E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 SMART SM00382 35 227 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 Pfam PF00005 ABC transporter 27 180 4.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS02540 c095afd5e5c8953a41daf3cbdaa52b2b 254 PANTHER PTHR24220 12 249 6.2E-99 T 22-04-2016 TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 SUPERFAMILY SSF52540 2 233 2.36E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 PANTHER PTHR24220:SF336 4 245 1.2E-97 T 22-04-2016 TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 Gene3D G3DSA:3.40.50.300 2 243 2.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 SMART SM00382 27 228 9.9E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 PANTHER PTHR24220 4 245 1.2E-97 T 22-04-2016 TMO_RS07150 c4bdac848abc6f8fa4e1b85795a772f4 273 Pfam PF00005 ABC transporter 19 170 3.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 Gene3D G3DSA:3.40.190.10 227 337 4.7E-25 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 PANTHER PTHR30290:SF2 6 370 6.8E-191 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 PANTHER PTHR30290:SF2 395 616 6.8E-191 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 PANTHER PTHR30290 6 370 6.8E-191 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 PANTHER PTHR30290 395 616 6.8E-191 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 SUPERFAMILY SSF53850 64 606 8.32E-119 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 PIRSF PIRSF002741 21 609 1.0E-96 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 117 520 9.8E-73 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 Gene3D G3DSA:3.10.105.10 338 369 3.0E-35 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 Gene3D G3DSA:3.10.105.10 403 575 3.0E-35 T 22-04-2016 TMO_RS16065 89c635813a9a128acef9777ee22af61a 616 Gene3D G3DSA:3.90.76.10 79 226 1.3E-30 T 22-04-2016 TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 PANTHER PTHR18901 13 228 2.6E-56 T 22-04-2016 TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 Gene3D G3DSA:3.40.50.1000 85 223 4.9E-37 T 22-04-2016 IPR023214 HAD-like domain TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 SUPERFAMILY SSF56784 14 224 1.18E-47 T 22-04-2016 IPR023214 HAD-like domain TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 PANTHER PTHR18901:SF23 13 228 2.6E-56 T 22-04-2016 TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 194 2.9E-22 T 22-04-2016 IPR023214 HAD-like domain TMO_RS06895 4c5c82bf4edbbe21ce5ddcd4b7fce99b 230 Gene3D G3DSA:1.10.150.240 28 84 6.0E-11 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 SUPERFAMILY SSF52540 23 254 1.97E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 SMART SM00382 47 240 5.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 23 259 4.5E-112 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 254 2.1E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 Gene3D G3DSA:3.40.50.300 23 251 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 Pfam PF00005 ABC transporter 38 183 4.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 PANTHER PTHR24220 24 256 1.8E-133 T 22-04-2016 TMO_RS00920 f6941f2f96f4d3167456e5cfd924976f 259 PANTHER PTHR24220:SF497 24 256 1.8E-133 T 22-04-2016 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 9 718 6.1E-271 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 146 165 2.4E-14 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 476 495 2.4E-14 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 407 433 2.4E-14 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 62 82 2.4E-14 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PRINTS PR01439 Cellulose synthase subunit A signature 548 569 2.4E-14 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 Gene3D G3DSA:3.90.550.10 137 395 2.8E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PANTHER PTHR10587 39 601 3.4E-72 T 22-04-2016 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF00535 Glycosyl transferase family 2 140 330 1.8E-34 T 22-04-2016 IPR001173 Glycosyltransferase 2-like TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF03552 Cellulose synthase 331 464 1.5E-8 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 SUPERFAMILY SSF53448 126 433 1.41E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 SUPERFAMILY SSF141371 571 626 4.9E-7 T 22-04-2016 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 Pfam PF07238 PilZ domain 575 686 1.2E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 TMO_RS05460 cbb1fee492902ed0733ac92bfae83c19 778 PANTHER PTHR10587:SF94 39 601 3.4E-72 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 PANTHER PTHR24095:SF180 17 549 4.0E-195 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:3.40.50.980 212 357 1.6E-29 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 SUPERFAMILY SSF56801 18 548 2.22E-129 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:2.30.38.10 369 446 2.9E-12 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:3.40.50.980 54 211 1.6E-26 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 539 3.2E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS07910 85cba8000076697158fec31a0027310d 573 PANTHER PTHR24095 17 549 4.0E-195 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Gene3D G3DSA:3.30.300.30 447 547 2.5E-23 T 22-04-2016 TMO_RS07910 85cba8000076697158fec31a0027310d 573 Pfam PF00501 AMP-binding enzyme 51 452 2.8E-70 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 308 2.2E-69 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 Pfam PF01545 Cation efflux family 31 235 6.1E-37 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 PANTHER PTHR11562 11 308 1.3E-146 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 PANTHER PTHR11562:SF40 11 308 1.3E-146 T 22-04-2016 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 SUPERFAMILY SSF161111 21 236 7.85E-50 T 22-04-2016 TMO_RS11315 b4bf234d03d707107d07df541bae82ea 312 Gene3D G3DSA:1.20.1510.10 24 235 1.3E-50 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 PANTHER PTHR24096 4 539 1.2E-231 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Gene3D G3DSA:2.30.38.10 361 435 1.2E-18 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Gene3D G3DSA:3.30.300.30 436 534 3.0E-27 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Pfam PF00501 AMP-binding enzyme 21 441 8.1E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 PANTHER PTHR24096:SF53 4 539 1.2E-231 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Gene3D G3DSA:3.40.50.980 12 186 2.4E-29 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Gene3D G3DSA:3.40.50.980 187 341 8.0E-35 T 22-04-2016 TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 450 525 6.3E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS17620 c4834fb3de4ab79ebf1a987f4297819d 543 SUPERFAMILY SSF56801 9 538 7.98E-138 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 PANTHER PTHR11669 106 276 3.3E-45 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 PANTHER PTHR11669 1 84 3.3E-45 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 Gene3D G3DSA:3.40.50.300 14 207 1.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 Pfam PF13177 DNA polymerase III, delta subunit 99 208 6.0E-25 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 PANTHER PTHR11669:SF8 106 276 3.3E-45 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 PANTHER PTHR11669:SF8 1 84 3.3E-45 T 22-04-2016 TMO_RS08440 a20d178c5fe0b610b9587fa4d555dbb9 375 SUPERFAMILY SSF52540 14 249 1.84E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 PANTHER PTHR11538 90 341 1.1E-105 T 22-04-2016 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 7.8E-24 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 342 4.4E-104 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 SUPERFAMILY SSF46589 15 99 1.15E-20 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 Pfam PF01409 tRNA synthetases class II core domain (F) 92 342 4.3E-105 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 Gene3D G3DSA:3.30.930.10 9 344 2.4E-129 T 22-04-2016 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 SUPERFAMILY SSF55681 92 344 1.7E-80 T 22-04-2016 TMO_RS01020 075483eb32db991c51f959a0b3a4823f 359 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 343 47.28 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 Gene3D G3DSA:3.30.420.80 9 130 4.0E-57 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 Pfam PF00411 Ribosomal protein S11 20 129 2.0E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 PIRSF PIRSF002131 1 130 8.6E-55 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 34.232 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 PANTHER PTHR11759 11 130 2.3E-72 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 3.3E-59 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13140 f97b530ae69c14ba2276fc78fba5dde8 130 SUPERFAMILY SSF53137 15 130 1.79E-50 T 22-04-2016 TMO_RS15975 e8995d5875a2764fb37460b9c11c15bf 317 SUPERFAMILY SSF56752 13 297 7.85E-65 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS15975 e8995d5875a2764fb37460b9c11c15bf 317 Gene3D G3DSA:3.30.470.10 15 128 8.5E-23 T 22-04-2016 TMO_RS15975 e8995d5875a2764fb37460b9c11c15bf 317 PANTHER PTHR11825 16 294 4.8E-56 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS15975 e8995d5875a2764fb37460b9c11c15bf 317 Pfam PF01063 Amino-transferase class IV 41 264 7.4E-38 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS15975 e8995d5875a2764fb37460b9c11c15bf 317 Gene3D G3DSA:3.20.10.10 142 296 3.3E-38 T 22-04-2016 TMO_RS09330 85a67776cf47d0c879616c07d2fa9b4f 296 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 3 296 1.1E-58 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 TMO_RS09330 85a67776cf47d0c879616c07d2fa9b4f 296 Pfam PF08340 Domain of unknown function (DUF1732) 212 296 4.4E-33 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 TMO_RS09330 85a67776cf47d0c879616c07d2fa9b4f 296 Pfam PF03755 YicC-like family, N-terminal region 4 159 2.5E-33 T 22-04-2016 IPR013527 YicC-like, N-terminal TMO_RS09330 85a67776cf47d0c879616c07d2fa9b4f 296 PANTHER PTHR30636 2 296 3.2E-79 T 22-04-2016 TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 SMART SM00448 20 133 1.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 PANTHER PTHR26402:SF50 20 138 6.3E-25 T 22-04-2016 TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 Pfam PF00072 Response regulator receiver domain 22 132 2.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 Gene3D G3DSA:3.40.50.2300 15 139 6.6E-29 T 22-04-2016 TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 SUPERFAMILY SSF52172 20 139 5.27E-27 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS09085 4efcdb57990ac66f9631897e929f837f 162 PANTHER PTHR26402 20 138 6.3E-25 T 22-04-2016 TMO_RS03015 15e385d66341b9adcbc87c70e8d677c1 390 Gene3D G3DSA:3.40.630.30 185 331 9.3E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS03015 15e385d66341b9adcbc87c70e8d677c1 390 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 16 384 8.6E-156 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition TMO_RS03015 15e385d66341b9adcbc87c70e8d677c1 390 PANTHER PTHR31384:SF34 48 322 2.8E-67 T 22-04-2016 TMO_RS03015 15e385d66341b9adcbc87c70e8d677c1 390 PANTHER PTHR31384 48 322 2.8E-67 T 22-04-2016 TMO_RS03015 15e385d66341b9adcbc87c70e8d677c1 390 SUPERFAMILY SSF55729 186 358 2.05E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS05455 321bfb21c4b084f439174e86df72c79e 929 PANTHER PTHR39083 161 656 1.2E-20 T 22-04-2016 TMO_RS05455 321bfb21c4b084f439174e86df72c79e 929 PANTHER PTHR39083:SF1 161 656 1.2E-20 T 22-04-2016 TMO_RS05455 321bfb21c4b084f439174e86df72c79e 929 Pfam PF03170 Bacterial cellulose synthase subunit 159 682 4.4E-65 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 TMO_RS15705 efc2cbf36d504434f0ba99fa3ad01b73 239 PANTHER PTHR23291:SF42 22 239 5.4E-70 T 22-04-2016 TMO_RS15705 efc2cbf36d504434f0ba99fa3ad01b73 239 PANTHER PTHR23291 22 239 5.4E-70 T 22-04-2016 IPR006214 Bax inhibitor 1-related TMO_RS15705 efc2cbf36d504434f0ba99fa3ad01b73 239 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 234 9.8E-61 T 22-04-2016 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 Pfam PF02311 AraC-like ligand binding domain 6 120 6.4E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 Gene3D G3DSA:2.60.120.280 16 93 6.3E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 PANTHER PTHR11019 8 254 9.7E-54 T 22-04-2016 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 SUPERFAMILY SSF46689 158 207 4.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 SUPERFAMILY SSF46689 211 255 1.25E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 SMART SM00342 173 255 3.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 SUPERFAMILY SSF51215 14 89 7.85E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 Pfam PF12833 Helix-turn-helix domain 181 255 2.6E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 PANTHER PTHR11019:SF111 8 254 9.7E-54 T 22-04-2016 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 Gene3D G3DSA:1.10.10.60 157 210 2.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14910 68642fa7c1101bce6e98e7311f58c42e 261 Gene3D G3DSA:1.10.10.60 211 254 1.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 PANTHER PTHR23309 2 284 3.0E-137 T 22-04-2016 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 Gene3D G3DSA:3.40.50.720 2 187 1.7E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 SUPERFAMILY SSF51735 1 184 1.35E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 182 207 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 SUPERFAMILY SSF48179 184 284 1.45E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 PIRSF PIRSF000105 1 288 1.8E-81 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 182 2.9E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 Gene3D G3DSA:1.10.1040.10 188 282 2.1E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS00650 45c967b0e78d2d88239cd5ce966697bb 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 281 6.1E-34 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS06980 f343c5591ff435a448295511d4b2686d 266 SUPERFAMILY SSF81345 2 253 2.09E-35 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS06980 f343c5591ff435a448295511d4b2686d 266 PANTHER PTHR30477:SF0 5 259 4.1E-63 T 22-04-2016 TMO_RS06980 f343c5591ff435a448295511d4b2686d 266 Gene3D G3DSA:1.10.3470.10 45 237 2.1E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS06980 f343c5591ff435a448295511d4b2686d 266 PANTHER PTHR30477 5 259 4.1E-63 T 22-04-2016 TMO_RS06980 f343c5591ff435a448295511d4b2686d 266 Pfam PF00950 ABC 3 transport family 5 254 1.4E-68 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 313 7.6E-95 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 Pfam PF00294 pfkB family carbohydrate kinase 10 295 1.8E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 Gene3D G3DSA:3.40.1190.20 35 314 1.5E-78 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 SUPERFAMILY SSF53613 5 301 7.48E-64 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 PANTHER PTHR10584:SF170 1 326 8.9E-95 T 22-04-2016 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 313 5.2E-95 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 PIRSF PIRSF000535 2 315 1.2E-85 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 TMO_RS02160 f8047faa08d5f8f2d807c50ccc9ea264 326 PANTHER PTHR10584 1 326 8.9E-95 T 22-04-2016 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 SUPERFAMILY SSF51621 157 339 1.92E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 SUPERFAMILY SSF51621 3 77 1.92E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.7E-63 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 SUPERFAMILY SSF50800 73 167 1.52E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 468 2.2E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 SUPERFAMILY SSF52935 320 469 7.06E-37 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 468 9.2E-149 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Gene3D G3DSA:3.40.1380.20 323 469 1.7E-42 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Pfam PF00224 Pyruvate kinase, barrel domain 5 335 8.9E-112 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Gene3D G3DSA:2.40.33.10 76 168 7.2E-26 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Gene3D G3DSA:3.20.20.60 169 322 8.3E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 Gene3D G3DSA:3.20.20.60 5 75 8.3E-91 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS09530 1e7756e7a1cf73bfe95ca2a2ce310b26 473 PANTHER PTHR11817 2 469 1.1E-191 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 TMO_RS13840 186b70852563bf49e975d2c6211be66a 134 SUPERFAMILY SSF158682 5 124 3.92E-9 T 22-04-2016 IPR029024 TerB-like TMO_RS05220 a5a99656b0ff3a157ccf93b83858e994 193 Gene3D G3DSA:1.25.40.10 7 183 5.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 SMART SM00487 34 241 1.9E-25 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 SMART SM00490 283 364 7.8E-14 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031:SF122 791 823 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031:SF122 261 382 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031:SF122 40 220 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF00270 DEAD/DEAH box helicase 41 208 4.9E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 SUPERFAMILY SSF52540 51 364 5.88E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 Gene3D G3DSA:3.40.50.300 258 376 1.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF08494 DEAD/H associated 609 790 7.0E-46 T 22-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 Gene3D G3DSA:3.40.50.300 27 211 1.4E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PIRSF PIRSF037307 21 820 3.2E-182 T 22-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031 791 823 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031 261 382 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 PANTHER PTHR24031 40 220 4.9E-56 T 22-04-2016 TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 Pfam PF00271 Helicase conserved C-terminal domain 260 359 1.3E-16 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS10385 3865c295fcbf80d272d80e8bc78a7aed 824 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 26 816 0.0 T 22-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 SUPERFAMILY SSF111369 48 261 7.06E-17 T 22-04-2016 TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 356 4.0E-69 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 Gene3D G3DSA:1.20.1600.10 97 168 5.6E-5 T 22-04-2016 TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 267 4.9E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 PANTHER PTHR30469 7 359 1.1E-67 T 22-04-2016 TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 Gene3D G3DSA:2.40.50.100 169 199 5.6E-12 T 22-04-2016 TMO_RS06955 59f82a96d7275a62e21c351e2119426e 360 Gene3D G3DSA:2.40.50.100 65 93 5.6E-12 T 22-04-2016 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 PANTHER PTHR11730 20 439 1.7E-138 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 Gene3D G3DSA:1.10.3430.10 50 427 1.4E-110 T 22-04-2016 IPR029020 Ammonium/urea transporter TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 TIGRFAM TIGR00836 amt: ammonium transporter 41 431 1.2E-104 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 PANTHER PTHR11730:SF6 20 439 1.7E-138 T 22-04-2016 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 ProSitePatterns PS01219 Ammonium transporters signature. 192 217 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 Pfam PF00909 Ammonium Transporter Family 42 431 1.5E-101 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 35 434 4.2E-174 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype TMO_RS15815 86b2794d650c3f1d2fe87ba6be5d8fd6 441 SUPERFAMILY SSF111352 36 412 4.18E-103 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 PANTHER PTHR11632 1 591 0.0 T 22-04-2016 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 PANTHER PTHR11632:SF51 1 591 0.0 T 22-04-2016 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF56425 240 358 2.84E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 596 3.6E-295 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF51905 4 263 7.63E-81 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF51905 362 431 7.63E-81 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 596 2.0E-248 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:4.10.80.40 543 596 5.7E-28 T 22-04-2016 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Pfam PF00890 FAD binding domain 13 408 4.8E-122 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:3.90.700.10 247 352 3.7E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 PIRSF PIRSF000171 2 586 5.4E-39 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 SUPERFAMILY SSF46977 454 596 4.19E-51 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:3.50.50.60 3 246 2.9E-123 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:3.50.50.60 354 426 2.9E-123 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 8.4E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 Gene3D G3DSA:1.20.58.100 438 542 6.2E-39 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 TMO_RS16515 e7184d2c8004b55fe8ef97247455fc99 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 SUPERFAMILY SSF54686 1 134 4.06E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 Gene3D G3DSA:3.90.1170.10 23 134 1.8E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 PANTHER PTHR12220 1 134 2.0E-70 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.2E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.2E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.2E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.2E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.7E-48 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 9.5E-58 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.659 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13220 33f600bbaa0a16d96f7cdc88220e985a 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 Gene3D G3DSA:3.40.640.10 46 309 1.2E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 Pfam PF00202 Aminotransferase class-III 11 433 2.6E-98 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 PANTHER PTHR11986:SF78 3 441 1.2E-187 T 22-04-2016 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 Gene3D G3DSA:3.90.1150.10 310 435 3.7E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 SUPERFAMILY SSF53383 8 434 1.1E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS14215 c56548475628fe903c9386e5db9c7ee5 445 PANTHER PTHR11986 3 441 1.2E-187 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 1.3076E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 1.3076E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 93 1.3076E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 Gene3D G3DSA:3.40.50.1820 31 288 1.3E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 PANTHER PTHR10992:SF796 32 304 9.6E-28 T 22-04-2016 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 Pfam PF00561 alpha/beta hydrolase fold 53 175 9.2E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 SUPERFAMILY SSF53474 32 290 1.31E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS02265 6e60fc59c3c8ab446661719b601e0c83 305 PANTHER PTHR10992 32 304 9.6E-28 T 22-04-2016 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 Pfam PF00137 ATP synthase subunit C 11 73 5.8E-15 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 Gene3D G3DSA:1.20.20.10 9 76 2.2E-24 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 PANTHER PTHR10031 5 78 2.0E-20 T 22-04-2016 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 SUPERFAMILY SSF81333 3 79 1.31E-19 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 21 77 1.5E-16 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 33 48 6.6E-17 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 50 75 6.6E-17 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 PRINTS PR00124 ATP synthase C subunit signature 12 31 6.6E-17 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS08310 1e55ac142bef2e814fb18eb07aab1317 82 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 16.471 T 22-04-2016 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 SUPERFAMILY SSF51735 1 173 2.24E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 SUPERFAMILY SSF48179 404 487 1.19E-15 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 1 171 1.0E-49 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Gene3D G3DSA:1.10.1040.10 176 272 2.9E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Gene3D G3DSA:1.10.1040.10 404 487 5.4E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 PANTHER PTHR23309 392 495 1.2E-168 T 22-04-2016 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 PANTHER PTHR23309 1 292 1.2E-168 T 22-04-2016 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 174 271 1.6E-28 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 404 486 8.8E-16 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 Gene3D G3DSA:3.40.50.720 1 175 1.2E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 SUPERFAMILY SSF48179 173 280 5.87E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 PANTHER PTHR23309:SF12 392 495 1.2E-168 T 22-04-2016 TMO_RS10495 b30e089207a6753dd989f1986f0c045c 495 PANTHER PTHR23309:SF12 1 292 1.2E-168 T 22-04-2016 TMO_RS10450 3237e1ef3f322d905daa26927a44cb3c 190 Pfam PF01966 HD domain 34 111 2.8E-5 T 22-04-2016 IPR006674 HD domain TMO_RS10450 3237e1ef3f322d905daa26927a44cb3c 190 Gene3D G3DSA:1.10.3210.10 34 111 1.8E-5 T 22-04-2016 IPR006674 HD domain TMO_RS10450 3237e1ef3f322d905daa26927a44cb3c 190 PANTHER PTHR40202:SF1 1 190 2.2E-27 T 22-04-2016 TMO_RS10450 3237e1ef3f322d905daa26927a44cb3c 190 SUPERFAMILY SSF109604 34 110 2.55E-6 T 22-04-2016 TMO_RS10450 3237e1ef3f322d905daa26927a44cb3c 190 PANTHER PTHR40202 1 190 2.2E-27 T 22-04-2016 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.7E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 Pfam PF03466 LysR substrate binding domain 88 283 7.4E-43 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 PANTHER PTHR30537 1 299 3.6E-69 T 22-04-2016 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 SUPERFAMILY SSF53850 89 285 6.36E-41 T 22-04-2016 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 Gene3D G3DSA:3.40.190.10 173 246 5.8E-9 T 22-04-2016 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 Gene3D G3DSA:1.10.10.10 1 83 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 Gene3D G3DSA:3.40.190.10 91 172 2.7E-17 T 22-04-2016 TMO_RS17110 7654735e0d2d846a0cee035b7cb8c5d3 299 SUPERFAMILY SSF46785 1 84 8.06E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF02080 TrkA-C domain 220 284 3.7E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF02080 TrkA-C domain 313 380 1.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 Gene3D G3DSA:3.30.70.1450 309 392 1.3E-19 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 Gene3D G3DSA:3.30.70.1450 218 296 1.2E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283 354 593 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283 252 268 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283 7 212 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 Pfam PF03600 Citrate transporter 16 540 7.4E-44 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 SUPERFAMILY SSF116726 213 292 5.75E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 SUPERFAMILY SSF116726 304 387 2.35E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283:SF100 354 593 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283:SF100 252 268 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 PANTHER PTHR10283:SF100 7 212 1.2E-130 T 22-04-2016 TMO_RS10685 802072ba01f8c4ec73a829c2f113890b 593 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 541 557 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 SUPERFAMILY SSF52172 1 176 2.28E-37 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 Gene3D G3DSA:3.40.50.2300 1 121 3.6E-36 T 22-04-2016 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 SMART SM00448 1 112 5.9E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 PANTHER PTHR26402 1 219 1.3E-85 T 22-04-2016 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 SMART SM00862 145 218 1.5E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 PANTHER PTHR26402:SF518 1 219 1.3E-85 T 22-04-2016 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 3.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS01885 e79d60f3d4e995e761de07fce01adfb9 224 Gene3D G3DSA:1.10.10.10 122 220 6.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10235 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 SUPERFAMILY SSF52096 6 255 5.67E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS10235 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 PANTHER PTHR11941 9 257 8.0E-67 T 22-04-2016 TMO_RS10235 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 Gene3D G3DSA:3.90.226.10 3 255 1.5E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS10235 0ecb3fd1900d6b165a3fe9934ba5fcc8 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 257 5.1E-52 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 90 110 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 PANTHER PTHR11941 1 239 1.7E-53 T 22-04-2016 TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 PANTHER PTHR11941:SF76 1 239 1.7E-53 T 22-04-2016 TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 SUPERFAMILY SSF52096 1 245 4.69E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 Gene3D G3DSA:3.90.226.10 1 239 1.3E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16450 269643b13c2498d2fcc4577b6702fdca 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 1 239 1.9E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 364 562 2.7E-70 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 Pfam PF14849 YidC periplasmic domain 74 353 3.4E-86 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 564 22.129 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 363 1.6E-92 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 254 269 2.7E-19 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 426 449 2.7E-19 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 335 355 2.7E-19 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR00701 60kDa inner membrane protein signature 80 101 2.7E-19 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 350 366 1.5E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 498 513 1.5E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PRINTS PR01900 YidC translocation/secretion protein signature 517 541 1.5E-21 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PANTHER PTHR12428:SF14 494 567 1.2E-74 T 22-04-2016 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PANTHER PTHR12428:SF14 293 474 1.2E-74 T 22-04-2016 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PANTHER PTHR12428 494 567 1.2E-74 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 PANTHER PTHR12428 293 474 1.2E-74 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS13675 bdae2ec6b534ddebd086f81550932150 568 Pfam PF02096 60Kd inner membrane protein 366 562 6.3E-61 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 TMO_RS16620 977e2da62df9d8742f8df2e2a8f7eda7 325 SUPERFAMILY SSF103481 56 164 6.41E-13 T 22-04-2016 TMO_RS16620 977e2da62df9d8742f8df2e2a8f7eda7 325 Pfam PF00892 EamA-like transporter family 24 161 4.8E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS16620 977e2da62df9d8742f8df2e2a8f7eda7 325 Pfam PF00892 EamA-like transporter family 173 304 1.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS16620 977e2da62df9d8742f8df2e2a8f7eda7 325 PANTHER PTHR22911 2 304 1.9E-37 T 22-04-2016 TMO_RS16620 977e2da62df9d8742f8df2e2a8f7eda7 325 SUPERFAMILY SSF103481 226 305 2.48E-11 T 22-04-2016 TMO_RS01650 b341b1143eed499c9b7499abd34a1e87 467 SUPERFAMILY SSF53850 111 335 1.67E-35 T 22-04-2016 TMO_RS01650 b341b1143eed499c9b7499abd34a1e87 467 Gene3D G3DSA:3.40.190.10 201 337 5.9E-12 T 22-04-2016 TMO_RS01650 b341b1143eed499c9b7499abd34a1e87 467 PANTHER PTHR30024 111 465 2.2E-116 T 22-04-2016 TMO_RS01650 b341b1143eed499c9b7499abd34a1e87 467 Pfam PF13379 NMT1-like family 110 346 1.7E-81 T 22-04-2016 TMO_RS01650 b341b1143eed499c9b7499abd34a1e87 467 PANTHER PTHR30024:SF10 111 465 2.2E-116 T 22-04-2016 TMO_RS09425 b87b623a099bced6f3a63be47163396a 257 PANTHER PTHR30188:SF4 7 255 2.3E-95 T 22-04-2016 TMO_RS09425 b87b623a099bced6f3a63be47163396a 257 Pfam PF02405 Permease MlaE 44 252 4.2E-78 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 TMO_RS09425 b87b623a099bced6f3a63be47163396a 257 PANTHER PTHR30188 7 255 2.3E-95 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 TMO_RS09425 b87b623a099bced6f3a63be47163396a 257 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 11 255 1.6E-75 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 Gene3D G3DSA:3.40.605.10 21 276 7.3E-88 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 Pfam PF00171 Aldehyde dehydrogenase family 35 494 2.9E-156 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 SUPERFAMILY SSF53720 17 497 1.57E-150 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 Gene3D G3DSA:3.40.309.10 277 458 1.3E-59 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS05170 a7e2ece5ecad53ae151eb0e52f82de56 510 PANTHER PTHR11699 4 496 4.2E-190 T 22-04-2016 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 SUPERFAMILY SSF46689 2 78 3.23E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 Gene3D G3DSA:1.10.357.10 2 186 4.4E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 PANTHER PTHR30055 1 192 2.4E-21 T 22-04-2016 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 3.9E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 8.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 8.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29230 297fb959ba726f9e98473ef397223e16 197 SUPERFAMILY SSF48498 97 183 3.61E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS23435 511731ae8cd45a2bde39d1091f4aea28 437 Gene3D G3DSA:3.40.920.10 64 263 2.8E-13 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TMO_RS23435 511731ae8cd45a2bde39d1091f4aea28 437 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 72 259 8.3E-21 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 TMO_RS23435 511731ae8cd45a2bde39d1091f4aea28 437 PANTHER PTHR18968:SF134 1 100 8.6E-38 T 22-04-2016 TMO_RS23435 511731ae8cd45a2bde39d1091f4aea28 437 PANTHER PTHR18968 1 100 8.6E-38 T 22-04-2016 TMO_RS23435 511731ae8cd45a2bde39d1091f4aea28 437 SUPERFAMILY SSF53323 64 270 1.07E-23 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 12 240 2.3E-37 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 PANTHER PTHR32119:SF2 1 252 8.3E-71 T 22-04-2016 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 Gene3D G3DSA:3.20.20.70 11 244 1.1E-70 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 10 245 31.776 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 SMART SM00934 12 240 7.5E-73 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 240 6.3E-42 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 PANTHER PTHR32119 1 252 8.3E-71 T 22-04-2016 TMO_RS16300 fdcf8836ad3e8af54a008870395c2799 253 SUPERFAMILY SSF51366 9 246 1.95E-60 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 PANTHER PTHR21666 299 433 1.3E-44 T 22-04-2016 TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 SMART SM00257 49 93 5.3E-12 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 SMART SM00257 97 141 4.9E-11 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Pfam PF01476 LysM domain 98 141 5.9E-11 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Pfam PF01476 LysM domain 51 93 5.0E-12 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 SUPERFAMILY SSF54106 96 141 2.75E-9 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Gene3D G3DSA:2.70.70.10 295 431 1.5E-42 T 22-04-2016 TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Gene3D G3DSA:3.10.350.10 96 142 1.0E-13 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Gene3D G3DSA:3.10.350.10 51 94 2.3E-13 T 22-04-2016 IPR018392 LysM domain TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 Pfam PF01551 Peptidase family M23 332 426 3.2E-30 T 22-04-2016 IPR016047 Peptidase M23 TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 SUPERFAMILY SSF51261 298 430 2.09E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif TMO_RS07755 46b5928cd43349ec2c9b5e178751a032 433 SUPERFAMILY SSF54106 51 93 6.67E-9 T 22-04-2016 IPR018392 LysM domain TMO_RS02035 65410c1dd243dcc7231086ae3381ac5c 307 PANTHER PTHR12715 17 296 2.7E-36 T 22-04-2016 TMO_RS02035 65410c1dd243dcc7231086ae3381ac5c 307 SUPERFAMILY SSF103481 56 154 7.85E-11 T 22-04-2016 TMO_RS02035 65410c1dd243dcc7231086ae3381ac5c 307 SUPERFAMILY SSF103481 201 299 2.62E-10 T 22-04-2016 TMO_RS02035 65410c1dd243dcc7231086ae3381ac5c 307 Pfam PF00892 EamA-like transporter family 21 153 3.1E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS02035 65410c1dd243dcc7231086ae3381ac5c 307 Pfam PF00892 EamA-like transporter family 165 298 4.8E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS15775 7e09a77781e5b81a8b9c300d04bfc3ed 356 PANTHER PTHR33376 5 354 1.3E-51 T 22-04-2016 TMO_RS15775 7e09a77781e5b81a8b9c300d04bfc3ed 356 SUPERFAMILY SSF53850 36 132 2.72E-5 T 22-04-2016 TMO_RS15775 7e09a77781e5b81a8b9c300d04bfc3ed 356 SUPERFAMILY SSF53850 165 271 2.72E-5 T 22-04-2016 TMO_RS15775 7e09a77781e5b81a8b9c300d04bfc3ed 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 326 2.0E-48 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 351 1.0E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF50615 3 76 2.62E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF52540 78 356 7.71E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 PANTHER PTHR15184:SF8 1 473 0.0 T 22-04-2016 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:2.40.10.170 2 76 1.8E-33 T 22-04-2016 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 469 1.4E-257 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 PANTHER PTHR15184 1 473 0.0 T 22-04-2016 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 SUPERFAMILY SSF47917 354 470 1.78E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 SMART SM00382 143 414 1.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 3.0E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 469 58.64 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 PIRSF PIRSF039072 1 474 6.2E-287 T 22-04-2016 TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:3.40.50.300 77 353 1.5E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15045 1fc2bb7f0ad67109731f42841466ed9a 474 Gene3D G3DSA:1.10.1140.10 354 471 1.3E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 73 222 1.0E-33 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 Pfam PF02390 Putative methyltransferase 74 237 4.8E-41 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 29 247 26.583 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 PANTHER PTHR23417:SF14 26 246 2.4E-48 T 22-04-2016 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 Gene3D G3DSA:3.40.50.150 75 208 1.4E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 PANTHER PTHR23417 26 246 2.4E-48 T 22-04-2016 TMO_RS17820 55ca609d77757a85d6f4fece6e20116d 247 SUPERFAMILY SSF53335 71 245 8.44E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 122 2.7E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 289 1.4E-67 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 SUPERFAMILY SSF51735 124 288 1.03E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 Gene3D G3DSA:3.40.192.10 8 140 4.9E-50 T 22-04-2016 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 291 38.863 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PANTHER PTHR10025 1 287 1.6E-157 T 22-04-2016 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 157 177 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 1.4E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 Gene3D G3DSA:3.40.50.720 141 272 1.8E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15625 e5ffc5a0eb560afd3054450dba0389ab 298 SUPERFAMILY SSF53223 4 123 1.63E-39 T 22-04-2016 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 15 224 8.2E-38 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 SUPERFAMILY SSF51366 14 227 2.51E-53 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 Gene3D G3DSA:3.20.20.70 13 228 2.2E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 13 229 37.681 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 PANTHER PTHR22854 13 227 5.5E-54 T 22-04-2016 TMO_RS16305 8c67fa16be8659c006e70585144ba9e2 234 PANTHER PTHR22854:SF6 13 227 5.5E-54 T 22-04-2016 TMO_RS06125 b8875a7967d213686db4687961907413 67 PANTHER PTHR35175 1 57 7.5E-12 T 22-04-2016 TMO_RS06125 b8875a7967d213686db4687961907413 67 PANTHER PTHR35175:SF2 1 57 7.5E-12 T 22-04-2016 TMO_RS06125 b8875a7967d213686db4687961907413 67 Pfam PF06945 Protein of unknown function (DUF1289) 5 52 1.8E-18 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 Pfam PF00771 FHIPEP family 36 690 4.6E-262 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 80 99 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 43 56 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 166 184 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 247 261 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 196 213 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 163 9.7E-54 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PANTHER PTHR30161 26 699 0.0 T 22-04-2016 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PANTHER PTHR30161:SF1 26 699 0.0 T 22-04-2016 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 152 175 - T 22-04-2016 IPR025505 FHIPEP conserved site TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 25 699 1.1E-272 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 TMO_RS06250 9eff8e2ed36b0409fcfc620fe18c952f 699 PIRSF PIRSF005419 16 699 1.1E-243 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 SUPERFAMILY SSF52540 224 390 1.31E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 Gene3D G3DSA:3.40.50.300 239 421 1.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 Pfam PF00448 SRP54-type protein, GTPase domain 229 421 1.5E-23 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 PANTHER PTHR11564 134 396 1.8E-24 T 22-04-2016 TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 PANTHER PTHR11564:SF3 134 396 1.8E-24 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 Gene3D G3DSA:1.20.120.140 171 238 6.5E-7 T 22-04-2016 TMO_RS29160 79bb68971926f09f3d1f7d18833dd0e2 440 SMART SM00962 228 422 9.3E-15 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 Gene3D G3DSA:3.65.10.10 249 449 3.5E-48 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 15 451 31.943 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 SUPERFAMILY SSF55205 15 450 1.18E-121 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 PANTHER PTHR21090:SF5 17 452 9.6E-143 T 22-04-2016 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 19 449 2.8E-118 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 PANTHER PTHR21090 17 452 9.6E-143 T 22-04-2016 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 ProSitePatterns PS00885 EPSP synthase signature 2. 359 377 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 442 5.5E-102 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 PIRSF PIRSF000505 1 454 5.1E-115 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 Gene3D G3DSA:3.65.10.10 27 248 4.6E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS16230 4aeff09bb4e1a880d58fbaa411aa1daa 455 ProSitePatterns PS00104 EPSP synthase signature 1. 102 116 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 Pfam PF00970 Oxidoreductase FAD-binding domain 18 92 7.7E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 4.1E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 4.1E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 4.1E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 PANTHER PTHR19370 1 257 3.3E-114 T 22-04-2016 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 SUPERFAMILY SSF52343 104 255 1.17E-37 T 22-04-2016 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 6.8E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 SUPERFAMILY SSF63380 4 99 1.4E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 PANTHER PTHR19370:SF98 1 257 3.3E-114 T 22-04-2016 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 Gene3D G3DSA:3.40.50.80 97 255 1.1E-43 T 22-04-2016 TMO_RS12870 254a7fb63de21ed0ea7a0e68bb6389d0 257 Gene3D G3DSA:2.40.30.10 4 96 9.0E-30 T 22-04-2016 TMO_RS08815 cb307103c3d9ff2a422c0e4c495a2340 69 Pfam PF00403 Heavy-metal-associated domain 5 63 1.2E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS08815 cb307103c3d9ff2a422c0e4c495a2340 69 SUPERFAMILY SSF55008 1 63 8.64E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS08815 cb307103c3d9ff2a422c0e4c495a2340 69 Gene3D G3DSA:3.30.70.100 3 63 1.2E-15 T 22-04-2016 TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 Gene3D G3DSA:3.40.50.300 5 241 4.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 SMART SM00382 38 227 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 PANTHER PTHR24220:SF483 15 253 3.3E-115 T 22-04-2016 TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 Pfam PF00005 ABC transporter 30 179 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 SUPERFAMILY SSF52540 11 230 3.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 PANTHER PTHR24220 15 253 3.3E-115 T 22-04-2016 TMO_RS07040 192a6015a153c18b577c241a160f13a5 283 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16215 8539a39eef6484b6b151655875190142 152 Pfam PF00011 Hsp20/alpha crystallin family 43 135 4.5E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain TMO_RS16215 8539a39eef6484b6b151655875190142 152 PANTHER PTHR11527 13 143 4.7E-31 T 22-04-2016 IPR031107 Small heat shock protein HSP20 TMO_RS16215 8539a39eef6484b6b151655875190142 152 SUPERFAMILY SSF49764 30 135 3.84E-18 T 22-04-2016 IPR008978 HSP20-like chaperone TMO_RS16215 8539a39eef6484b6b151655875190142 152 Gene3D G3DSA:2.60.40.790 4 135 5.0E-14 T 22-04-2016 IPR008978 HSP20-like chaperone TMO_RS16215 8539a39eef6484b6b151655875190142 152 PANTHER PTHR11527:SF145 13 143 4.7E-31 T 22-04-2016 TMO_RS00765 5f8775832981dd6a5d02a5e7a712f558 425 PANTHER PTHR33362 1 419 1.0E-114 T 22-04-2016 TMO_RS00765 5f8775832981dd6a5d02a5e7a712f558 425 PANTHER PTHR33362:SF2 1 419 1.0E-114 T 22-04-2016 TMO_RS00765 5f8775832981dd6a5d02a5e7a712f558 425 PIRSF PIRSF006066 1 425 4.8E-148 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS00765 5f8775832981dd6a5d02a5e7a712f558 425 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 416 2.3E-126 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS00765 5f8775832981dd6a5d02a5e7a712f558 425 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 412 9.4E-115 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:3.90.226.10 429 449 1.3E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:3.90.226.10 175 358 1.3E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Pfam PF03572 Peptidase family S41 191 355 3.1E-57 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 PANTHER PTHR32060 26 356 1.4E-117 T 22-04-2016 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Pfam PF13180 PDZ domain 91 172 3.2E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 SUPERFAMILY SSF52096 27 111 5.8E-83 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 SUPERFAMILY SSF52096 184 360 5.8E-83 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 43 361 8.4E-102 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 SMART SM00245 166 356 4.5E-73 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:2.30.42.10 97 174 1.7E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 SUPERFAMILY SSF50156 61 184 1.48E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 Gene3D G3DSA:3.30.750.44 34 96 9.4E-10 T 22-04-2016 TMO_RS15000 617de68b8df7e85c5dc08bed24f3f168 465 SMART SM00228 91 164 1.8E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 SMART SM00363 93 157 1.7E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 Gene3D G3DSA:1.10.1050.10 1 94 5.4E-32 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 Pfam PF01479 S4 domain 94 140 4.2E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 SUPERFAMILY SSF55174 7 204 5.5E-61 T 22-04-2016 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 PANTHER PTHR11831:SF4 1 204 1.2E-68 T 22-04-2016 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 SMART SM01390 3 92 1.2E-37 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 PANTHER PTHR11831 1 204 1.2E-68 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 31.508 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 Gene3D G3DSA:3.10.290.10 95 193 9.1E-34 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 6 92 4.1E-22 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 1.2E-72 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_RS11510 64bf54507f9b59081f8e11e0f14ff720 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 TMO_RS01280 eeec3afd9ccca9ae9ba7feb4640aeae4 249 PANTHER PTHR39167 122 247 8.5E-22 T 22-04-2016 TMO_RS01280 eeec3afd9ccca9ae9ba7feb4640aeae4 249 SUPERFAMILY SSF48371 57 247 7.2E-32 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 TMO_RS01280 eeec3afd9ccca9ae9ba7feb4640aeae4 249 Gene3D G3DSA:1.25.10.10 76 205 7.3E-5 T 22-04-2016 IPR011989 Armadillo-like helical TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 Gene3D G3DSA:3.40.50.1820 226 360 1.0E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 Gene3D G3DSA:3.40.50.1820 19 193 1.0E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 361 46.567 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 PANTHER PTHR32268:SF11 4 359 2.7E-174 T 22-04-2016 TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 Pfam PF00561 alpha/beta hydrolase fold 37 347 3.1E-31 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 SUPERFAMILY SSF53474 7 361 2.13E-103 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 PANTHER PTHR32268 4 359 2.7E-174 T 22-04-2016 TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 8 359 7.7E-144 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 TMO_RS00740 3953c7ed4e39e6f4ca03f5251d9fff0d 371 PIRSF PIRSF000443 3 370 5.5E-145 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 TMO_RS21845 58a5daf05ae5dcd10610c94599f8d0a3 153 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 149 3.6E-12 T 22-04-2016 IPR024478 4HB MCP domain TMO_RS28995 0fe249b1af00c57ec8de46bc5337e573 311 SUPERFAMILY SSF53955 58 93 1.2E-12 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS28995 0fe249b1af00c57ec8de46bc5337e573 311 SUPERFAMILY SSF53955 130 201 1.2E-12 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS28995 0fe249b1af00c57ec8de46bc5337e573 311 Gene3D G3DSA:1.10.530.10 130 184 6.9E-10 T 22-04-2016 TMO_RS28995 0fe249b1af00c57ec8de46bc5337e573 311 Gene3D G3DSA:1.10.530.10 58 93 6.9E-10 T 22-04-2016 TMO_RS28995 0fe249b1af00c57ec8de46bc5337e573 311 Pfam PF01464 Transglycosylase SLT domain 59 183 1.6E-6 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 TMO_RS11755 4124971767da8f4789451904df065d9f 274 Pfam PF00459 Inositol monophosphatase family 20 255 3.0E-46 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 72 88 9.8E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 50 70 9.8E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 221 245 9.8E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 97 113 9.8E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 189 210 9.8E-12 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 97 110 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site TMO_RS11755 4124971767da8f4789451904df065d9f 274 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 224 238 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 Gene3D G3DSA:3.40.190.80 167 264 6.7E-36 T 22-04-2016 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PANTHER PTHR20854 10 266 2.1E-65 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 TMO_RS11755 4124971767da8f4789451904df065d9f 274 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 19 263 1.0E-79 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 TMO_RS11755 4124971767da8f4789451904df065d9f 274 PANTHER PTHR20854:SF5 10 266 2.1E-65 T 22-04-2016 TMO_RS11755 4124971767da8f4789451904df065d9f 274 Gene3D G3DSA:3.30.540.10 19 166 4.2E-37 T 22-04-2016 TMO_RS11755 4124971767da8f4789451904df065d9f 274 SUPERFAMILY SSF56655 19 262 2.09E-67 T 22-04-2016 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 326 2.2E-74 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 PANTHER PTHR18866 1 561 0.0 T 22-04-2016 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 SUPERFAMILY SSF56059 115 331 2.83E-66 T 22-04-2016 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Gene3D G3DSA:3.30.1490.20 129 202 3.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 SMART SM00878 340 446 1.7E-62 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Gene3D G3DSA:3.30.470.20 205 449 6.3E-104 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Pfam PF02785 Biotin carboxylase C-terminal domain 340 447 2.7E-41 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Gene3D G3DSA:3.40.50.20 1 128 4.6E-54 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.1E-46 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 SUPERFAMILY SSF51246 335 450 3.09E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 TMO_RS12960 57da17c9f07e527bbe199a90441fee50 673 SUPERFAMILY SSF52440 1 113 3.45E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 PANTHER PTHR23088 1 257 4.4E-96 T 22-04-2016 TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 139 159 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 Pfam PF00795 Carbon-nitrogen hydrolase 3 246 5.8E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 SUPERFAMILY SSF56317 3 255 1.7E-75 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 PANTHER PTHR23088:SF27 1 257 4.4E-96 T 22-04-2016 TMO_RS01835 fc8c2efd3d63e0063ffd5817be125a30 261 Gene3D G3DSA:3.60.110.10 2 257 1.0E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 Gene3D G3DSA:3.90.180.10 1 150 1.2E-49 T 22-04-2016 IPR011032 GroES-like TMO_RS09840 d293028a7e28fabdef9833677014398b 330 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 2.8E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 PANTHER PTHR11695 15 329 2.7E-99 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 Pfam PF00107 Zinc-binding dehydrogenase 156 244 3.9E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 Gene3D G3DSA:3.40.50.720 151 260 9.9E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09840 d293028a7e28fabdef9833677014398b 330 PANTHER PTHR11695:SF294 15 329 2.7E-99 T 22-04-2016 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 SUPERFAMILY SSF50129 1 149 4.72E-41 T 22-04-2016 IPR011032 GroES-like TMO_RS09840 d293028a7e28fabdef9833677014398b 330 SMART SM00829 10 326 6.3E-41 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS09840 d293028a7e28fabdef9833677014398b 330 SUPERFAMILY SSF51735 117 296 7.08E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Pfam PF13365 Trypsin-like peptidase domain 92 228 5.1E-34 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SUPERFAMILY SSF50494 33 256 9.99E-65 T 22-04-2016 IPR009003 Peptidase S1, PA clan TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PANTHER PTHR22939 428 440 2.2E-115 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PANTHER PTHR22939 1 346 2.2E-115 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 35 463 3.5E-146 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SUPERFAMILY SSF50156 375 466 4.99E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SMART SM00228 391 459 1.1E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SMART SM00228 267 348 1.9E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PANTHER PTHR22939:SF93 428 440 2.2E-115 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PANTHER PTHR22939:SF93 1 346 2.2E-115 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Pfam PF13180 PDZ domain 269 357 8.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Pfam PF13180 PDZ domain 387 466 2.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Gene3D G3DSA:2.30.42.10 269 362 1.8E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Gene3D G3DSA:2.30.42.10 377 466 2.2E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 306 318 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 101 113 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 PRINTS PR00834 HtrA/DegQ protease family signature 122 142 2.0E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SUPERFAMILY SSF50156 284 361 1.45E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 SUPERFAMILY SSF50156 218 244 1.45E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Gene3D G3DSA:2.40.10.10 33 153 6.7E-38 T 22-04-2016 TMO_RS13125 be4c30b26430efd4840e91445d1997d4 468 Gene3D G3DSA:2.40.10.10 156 268 1.0E-41 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00283 300 547 3.0E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 Gene3D G3DSA:1.10.287.950 328 522 1.9E-41 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089:SF56 278 557 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089:SF56 119 134 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089:SF56 186 246 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 369 549 2.8E-34 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00304 481 534 53.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 SMART SM00304 211 264 5.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089 278 557 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089 119 134 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 PANTHER PTHR32089 186 246 8.0E-96 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 Pfam PF00672 HAMP domain 192 258 9.9E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 SUPERFAMILY SSF58104 241 266 4.58E-55 T 22-04-2016 TMO_RS03795 32bf56e0c6d2ef51bf18e5654c3257f9 560 SUPERFAMILY SSF58104 306 553 4.58E-55 T 22-04-2016 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 2 210 2.9E-47 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PANTHER PTHR12383 1 50 5.1E-69 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PANTHER PTHR12383 66 212 5.1E-69 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 ProSitePatterns PS00501 Signal peptidases I serine active site. 27 34 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 ProSitePatterns PS00760 Signal peptidases I lysine active site. 90 102 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 Pfam PF00717 Peptidase S24-like 25 111 2.8E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 Gene3D G3DSA:2.10.109.10 14 98 2.0E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 Gene3D G3DSA:2.10.109.10 167 222 2.0E-47 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PANTHER PTHR12383:SF27 1 50 5.1E-69 T 22-04-2016 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PANTHER PTHR12383:SF27 66 212 5.1E-69 T 22-04-2016 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 SUPERFAMILY SSF51306 16 233 8.89E-62 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 18 34 8.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 167 186 8.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS08020 bc4024623c380263c9a5868b49c7f72d 236 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 88 100 8.7E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 Gene3D G3DSA:1.20.1250.20 208 385 2.3E-5 T 22-04-2016 TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 Gene3D G3DSA:1.20.1250.20 12 186 4.1E-22 T 22-04-2016 TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 PANTHER PTHR23501 3 393 9.9E-44 T 22-04-2016 TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 SUPERFAMILY SSF103473 3 385 5.1E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 PANTHER PTHR23501:SF4 3 393 9.9E-44 T 22-04-2016 TMO_RS02630 ee472a988df34cd1e57c4ed9af0224db 394 Pfam PF07690 Major Facilitator Superfamily 20 354 3.2E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS06440 e1bb8f0a7beef836b4a660faa9c71e0d 385 PANTHER PTHR22893 17 380 7.0E-150 T 22-04-2016 TMO_RS06440 e1bb8f0a7beef836b4a660faa9c71e0d 385 PANTHER PTHR22893:SF7 17 380 7.0E-150 T 22-04-2016 TMO_RS06440 e1bb8f0a7beef836b4a660faa9c71e0d 385 SUPERFAMILY SSF51395 29 382 9.87E-107 T 22-04-2016 TMO_RS06440 e1bb8f0a7beef836b4a660faa9c71e0d 385 Gene3D G3DSA:3.20.20.70 28 378 6.2E-116 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06440 e1bb8f0a7beef836b4a660faa9c71e0d 385 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 31 368 3.5E-58 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_RS06635 4462e977ecb013af96dfbfe564be8c58 292 Gene3D G3DSA:1.10.3720.10 59 288 8.9E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06635 4462e977ecb013af96dfbfe564be8c58 292 PANTHER PTHR30193 1 292 3.1E-84 T 22-04-2016 TMO_RS06635 4462e977ecb013af96dfbfe564be8c58 292 SUPERFAMILY SSF161098 53 277 8.24E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06635 4462e977ecb013af96dfbfe564be8c58 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 288 4.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06635 4462e977ecb013af96dfbfe564be8c58 292 PANTHER PTHR30193:SF6 1 292 3.1E-84 T 22-04-2016 TMO_RS14115 d23376a5023d8b95bd4ad75f7a05d6b4 275 PANTHER PTHR31527 1 273 2.4E-84 T 22-04-2016 TMO_RS14115 d23376a5023d8b95bd4ad75f7a05d6b4 275 Pfam PF09347 Domain of unknown function (DUF1989) 44 224 1.2E-61 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 TMO_RS14115 d23376a5023d8b95bd4ad75f7a05d6b4 275 PANTHER PTHR31527:SF0 1 273 2.4E-84 T 22-04-2016 TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 PANTHER PTHR10996:SF114 11 315 1.8E-82 T 22-04-2016 TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 282 4.6E-43 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 Gene3D G3DSA:3.40.50.720 22 122 1.4E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 SUPERFAMILY SSF51735 106 283 2.01E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 Gene3D G3DSA:3.40.50.720 123 284 9.5E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05930 cacdd4e87d43961f97701367f9159bc1 317 PANTHER PTHR10996 11 315 1.8E-82 T 22-04-2016 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 PANTHER PTHR18919:SF8 166 417 3.0E-73 T 22-04-2016 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 PANTHER PTHR18919:SF8 1 150 3.0E-73 T 22-04-2016 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Pfam PF00108 Thiolase, N-terminal domain 4 121 6.1E-9 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 SUPERFAMILY SSF53901 1 129 4.71E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Pfam PF02803 Thiolase, C-terminal domain 288 393 3.2E-12 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Gene3D G3DSA:3.40.47.10 270 392 3.8E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Gene3D G3DSA:3.40.47.10 176 198 3.8E-21 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 SUPERFAMILY SSF53901 266 401 5.9E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 ProSitePatterns PS00737 Thiolases signature 2. 350 366 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 PIRSF PIRSF000429 1 406 4.0E-49 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Gene3D G3DSA:3.40.47.10 3 126 1.1E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 Gene3D G3DSA:3.40.47.10 199 254 1.1E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 PANTHER PTHR18919 166 417 3.0E-73 T 22-04-2016 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 PANTHER PTHR18919 1 150 3.0E-73 T 22-04-2016 TMO_RS02745 a2c2bf1dbc9535f341ae898270210591 418 SUPERFAMILY SSF53901 157 252 4.71E-28 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 Pfam PF03466 LysR substrate binding domain 187 250 1.7E-8 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 SUPERFAMILY SSF53850 97 248 1.39E-12 T 22-04-2016 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 71 1.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:1.10.10.10 6 91 1.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:3.40.190.10 187 245 1.3E-8 T 22-04-2016 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 Gene3D G3DSA:3.40.190.10 100 153 1.2E-6 T 22-04-2016 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 PANTHER PTHR30579:SF0 1 283 6.4E-42 T 22-04-2016 TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 SUPERFAMILY SSF46785 6 114 7.81E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05610 67c785555d6a20fd50aeafd22e46e2e4 289 PANTHER PTHR30579 1 283 6.4E-42 T 22-04-2016 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 Pfam PF00005 ABC transporter 44 185 2.4E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 Pfam PF08402 TOBE domain 303 383 7.2E-18 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 SUPERFAMILY SSF50331 264 382 1.02E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 SUPERFAMILY SSF52540 28 266 1.64E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 SMART SM00382 52 235 3.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 PANTHER PTHR24220:SF481 29 375 9.9E-172 T 22-04-2016 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 Gene3D G3DSA:3.40.50.300 24 262 3.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 PANTHER PTHR24220 29 375 9.9E-172 T 22-04-2016 TMO_RS01485 d5fb6a5dacdd326fd131a7e9f7b98ea7 385 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 58 383 5.4E-135 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 TMO_RS29120 cf5010d0197fe9bc78a436f94f4b7b5b 127 Pfam PF10135 Rod binding protein 78 118 5.3E-7 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 SMART SM01374 1 122 6.6E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 PANTHER PTHR11761 2 122 5.0E-76 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 2.2E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.3E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.505 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 Gene3D G3DSA:2.40.150.20 2 122 2.7E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS13205 036820325453fc91b44aa9d70118d1b7 122 SUPERFAMILY SSF50193 2 121 1.83E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 PIRSF PIRSF001461 14 238 1.1E-92 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 Gene3D G3DSA:3.20.20.70 13 231 7.1E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 PANTHER PTHR11749 16 232 1.8E-121 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 20 216 2.1E-83 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 47 61 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 20 230 6.2E-89 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 SUPERFAMILY SSF51366 17 231 6.48E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS00535 48769a2fc13b1a0b9540f402b9821f52 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 149 171 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 PANTHER PTHR30160 1 281 5.2E-19 T 22-04-2016 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 120 284 6.8E-28 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 PANTHER PTHR30160:SF7 1 281 5.2E-19 T 22-04-2016 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 Gene3D G3DSA:3.40.50.2000 138 321 2.6E-36 T 22-04-2016 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 SUPERFAMILY SSF53756 1 321 3.35E-53 T 22-04-2016 TMO_RS04985 112db5ae2a54691d263a0aa1f2a3f1d8 330 Gene3D G3DSA:3.40.50.2000 3 126 1.7E-11 T 22-04-2016 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 171 1.0E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 Pfam PF00593 TonB dependent receptor 437 690 3.2E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 Gene3D G3DSA:2.170.130.10 51 174 4.3E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 SUPERFAMILY SSF56935 55 692 3.23E-110 T 22-04-2016 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 PANTHER PTHR32552 1 692 2.9E-64 T 22-04-2016 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 54 692 7.6E-132 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 Gene3D G3DSA:2.40.170.20 175 692 3.7E-89 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS16995 740aec5b81466d3395e81844890aecef 692 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 56 692 3.6E-101 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 TMO_RS08890 474f81e6ea6a4b4d2f4502ca13649fb3 274 PANTHER PTHR39962:SF1 7 274 3.3E-59 T 22-04-2016 TMO_RS08890 474f81e6ea6a4b4d2f4502ca13649fb3 274 Pfam PF06230 Protein of unknown function (DUF1009) 59 269 9.3E-72 T 22-04-2016 IPR010415 Protein of unknown function DUF1009 TMO_RS08890 474f81e6ea6a4b4d2f4502ca13649fb3 274 PANTHER PTHR39962 7 274 3.3E-59 T 22-04-2016 TMO_RS12325 cc023821a00a5b7ad1962dd2275ce9d0 95 PANTHER PTHR33606 1 93 1.6E-18 T 22-04-2016 TMO_RS12325 cc023821a00a5b7ad1962dd2275ce9d0 95 Pfam PF03795 YCII-related domain 1 91 4.3E-15 T 22-04-2016 IPR005545 YCII-related TMO_RS12325 cc023821a00a5b7ad1962dd2275ce9d0 95 Gene3D G3DSA:3.30.70.1060 1 91 4.8E-25 T 22-04-2016 TMO_RS12325 cc023821a00a5b7ad1962dd2275ce9d0 95 SUPERFAMILY SSF54909 1 92 2.63E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS13880 50a6b132d010652cbce239b8d30a5f3d 140 Pfam PF03795 YCII-related domain 1 112 4.2E-22 T 22-04-2016 IPR005545 YCII-related TMO_RS13880 50a6b132d010652cbce239b8d30a5f3d 140 Gene3D G3DSA:3.30.70.1060 1 117 6.2E-39 T 22-04-2016 TMO_RS13880 50a6b132d010652cbce239b8d30a5f3d 140 PANTHER PTHR35174:SF1 2 137 1.4E-62 T 22-04-2016 TMO_RS13880 50a6b132d010652cbce239b8d30a5f3d 140 PANTHER PTHR35174 2 137 1.4E-62 T 22-04-2016 TMO_RS13880 50a6b132d010652cbce239b8d30a5f3d 140 SUPERFAMILY SSF54909 1 118 2.15E-35 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SMART SM00448 1 112 2.1E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 PANTHER PTHR26402 1 226 5.0E-106 T 22-04-2016 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 PANTHER PTHR26402:SF553 1 226 5.0E-106 T 22-04-2016 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SMART SM00862 145 221 6.6E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Pfam PF00072 Response regulator receiver domain 3 113 4.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Gene3D G3DSA:1.10.10.10 123 223 1.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 Gene3D G3DSA:3.40.50.2300 1 122 3.3E-39 T 22-04-2016 TMO_RS06180 dfabfe0369cd003f2bd52bfcbdab8cc1 243 SUPERFAMILY SSF52172 1 173 3.42E-41 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 147 459 2.3E-119 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 SMART SM00851 28 142 4.6E-58 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Gene3D G3DSA:3.40.140.20 376 525 3.0E-58 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Gene3D G3DSA:3.40.50.1380 15 200 2.9E-81 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 SUPERFAMILY SSF53927 223 535 7.72E-128 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Pfam PF02142 MGS-like domain 28 141 1.6E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 16 535 44.402 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 18 535 8.6E-209 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 SMART SM00798 147 460 3.3E-202 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 PANTHER PTHR11692:SF2 14 535 6.3E-300 T 22-04-2016 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 Gene3D G3DSA:3.40.140.20 252 369 2.2E-47 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 SUPERFAMILY SSF52335 16 207 3.01E-69 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 PANTHER PTHR11692 14 535 6.3E-300 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS15715 8386a81d193ab57b0496477c4c6fa43b 535 PIRSF PIRSF000414 12 535 4.8E-215 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 Gene3D G3DSA:3.40.50.2300 51 169 2.8E-21 T 22-04-2016 TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 SUPERFAMILY SSF53822 54 334 4.53E-44 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 Gene3D G3DSA:3.40.50.2300 170 319 6.0E-27 T 22-04-2016 TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 PANTHER PTHR30146:SF60 51 350 2.0E-40 T 22-04-2016 TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 Pfam PF13407 Periplasmic binding protein domain 60 315 3.9E-31 T 22-04-2016 IPR025997 Periplasmic binding protein TMO_RS05785 7a2049ad7e7e03aa34e9069a017e71c9 353 PANTHER PTHR30146 51 350 2.0E-40 T 22-04-2016 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 Gene3D G3DSA:3.40.50.1980 228 379 3.1E-42 T 22-04-2016 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 174 200 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 1.9E-70 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PIRSF PIRSF000099 1 437 1.4E-148 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 Gene3D G3DSA:3.40.50.1980 33 227 2.9E-63 T 22-04-2016 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 434 34.01 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 SUPERFAMILY SSF53720 29 430 8.24E-59 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 431 2.8E-130 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 PANTHER PTHR21256 9 440 3.5E-150 T 22-04-2016 TMO_RS02245 a1cfad693dd215a519d6e548da4c00c1 440 Pfam PF00815 Histidinol dehydrogenase 22 431 2.5E-133 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS06295 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF13861 FlgD Tudor-like domain 85 217 1.1E-13 T 22-04-2016 IPR025963 FlgD Tudor-like domain TMO_RS06295 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 77 4.9E-19 T 22-04-2016 IPR005648 Flagellar hook capping protein TMO_RS06295 ba1228acd2f5f46a10057a35ec9aafd1 259 Pfam PF13860 FlgD Ig-like domain 102 176 2.5E-19 T 22-04-2016 IPR025965 FlgD Ig-like domain TMO_RS06295 ba1228acd2f5f46a10057a35ec9aafd1 259 PANTHER PTHR30435 27 235 3.5E-39 T 22-04-2016 TMO_RS06295 ba1228acd2f5f46a10057a35ec9aafd1 259 PANTHER PTHR30435:SF15 27 235 3.5E-39 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 SUPERFAMILY SSF56801 7 381 8.9E-102 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 PANTHER PTHR24096 9 386 9.2E-95 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 Pfam PF13193 AMP-binding enzyme C-terminal domain 293 368 1.8E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 Gene3D G3DSA:3.40.50.980 24 189 1.1E-34 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 Gene3D G3DSA:2.30.38.10 202 275 1.1E-18 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 Gene3D G3DSA:3.30.300.30 280 378 4.1E-26 T 22-04-2016 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 Pfam PF00501 AMP-binding enzyme 21 284 2.9E-59 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS06075 51f10db1f15724333700aa8e901e4c8d 386 PANTHER PTHR24096:SF232 9 386 9.2E-95 T 22-04-2016 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 SUPERFAMILY SSF56645 1 225 1.18E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 SUPERFAMILY SSF47203 229 376 2.9E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 360 6.5E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 PANTHER PTHR10909 1 380 2.4E-66 T 22-04-2016 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.2E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:1.20.140.10 218 375 4.5E-32 T 22-04-2016 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 PANTHER PTHR10909:SF341 1 380 2.4E-66 T 22-04-2016 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 5.5E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:1.10.540.10 1 118 2.1E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03205 3d2ba492e00cad0cac1bbdeb2a42e4da 382 Gene3D G3DSA:2.40.110.10 122 217 5.9E-19 T 22-04-2016 TMO_RS10230 071caeeab30f36da32bf0a770280bb3a 379 Pfam PF00296 Luciferase-like monooxygenase 4 323 3.3E-45 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS10230 071caeeab30f36da32bf0a770280bb3a 379 PANTHER PTHR30137 1 363 4.0E-47 T 22-04-2016 TMO_RS10230 071caeeab30f36da32bf0a770280bb3a 379 Gene3D G3DSA:3.20.20.30 3 356 2.9E-81 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS10230 071caeeab30f36da32bf0a770280bb3a 379 SUPERFAMILY SSF51679 4 355 4.58E-75 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Gene3D G3DSA:1.25.40.10 149 199 5.6E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF13432 Tetratricopeptide repeat 332 370 0.015 T 22-04-2016 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF13432 Tetratricopeptide repeat 399 447 0.0036 T 22-04-2016 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF13432 Tetratricopeptide repeat 223 270 7.9E-6 T 22-04-2016 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 SUPERFAMILY SSF48452 330 448 8.93E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 SUPERFAMILY SSF48452 163 259 8.93E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 5 125 2.0E-28 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Gene3D G3DSA:1.25.40.10 332 448 5.4E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Pfam PF07719 Tetratricopeptide repeat 165 197 1.6E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 PANTHER PTHR23083 149 264 3.2E-17 T 22-04-2016 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 PANTHER PTHR23083 336 448 3.2E-17 T 22-04-2016 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 SMART SM00028 164 197 5.9E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 SMART SM00028 339 372 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_RS15545 424a4a74ea889bb44e688140b5190fe9 474 Gene3D G3DSA:1.25.40.10 200 283 5.7E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 PANTHER PTHR11695:SF31 15 320 7.4E-142 T 22-04-2016 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 5.9E-11 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 SMART SM00829 10 320 2.2E-63 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 SUPERFAMILY SSF51735 112 270 1.03E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 PANTHER PTHR11695 15 320 7.4E-142 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 Pfam PF00107 Zinc-binding dehydrogenase 151 266 4.4E-32 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 SUPERFAMILY SSF50129 2 141 5.93E-40 T 22-04-2016 IPR011032 GroES-like TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 Gene3D G3DSA:3.40.50.720 146 260 2.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03295 be9cfc055e51b8fb797fcd1f799f7b63 323 Gene3D G3DSA:3.90.180.10 2 145 1.9E-47 T 22-04-2016 IPR011032 GroES-like TMO_RS06630 1172117a7f4f82e5abcedd74791c4769 269 Gene3D G3DSA:1.10.3720.10 11 257 1.1E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06630 1172117a7f4f82e5abcedd74791c4769 269 PANTHER PTHR32243 14 269 1.7E-89 T 22-04-2016 TMO_RS06630 1172117a7f4f82e5abcedd74791c4769 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 262 1.0E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06630 1172117a7f4f82e5abcedd74791c4769 269 SUPERFAMILY SSF161098 11 269 3.01E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06630 1172117a7f4f82e5abcedd74791c4769 269 PANTHER PTHR32243:SF7 14 269 1.7E-89 T 22-04-2016 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 Pfam PF13742 OB-fold nucleic acid binding domain 4 97 5.5E-28 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 PANTHER PTHR30008:SF0 2 360 2.9E-140 T 22-04-2016 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 PANTHER PTHR30008:SF0 404 500 2.9E-140 T 22-04-2016 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 PANTHER PTHR30008 2 360 2.9E-140 T 22-04-2016 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 PANTHER PTHR30008 404 500 2.9E-140 T 22-04-2016 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 5 347 8.7E-118 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 488 27.557 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 TMO_RS14480 d02881f651f14a44ea6d5b0ceba370a5 520 Pfam PF02601 Exonuclease VII, large subunit 120 485 1.6E-87 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.40.50.620 244 374 2.5E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF13492 GAF domain 537 660 9.8E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF00512 His Kinase A (phospho-acceptor) domain 681 747 5.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF52402 251 364 7.37E-7 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423:SF562 1 197 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423:SF562 607 646 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423:SF562 663 915 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.40.50.300 20 229 6.6E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:1.10.287.130 675 743 2.4E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 882 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 848 858 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 889 902 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 830 844 4.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.30.450.40 512 670 4.6E-11 T 22-04-2016 IPR029016 GAF domain-like TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF13493 Domain of unknown function (DUF4118) 416 517 5.6E-28 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:3.30.565.10 749 909 2.0E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 795 902 4.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF55781 537 669 4.36E-8 T 22-04-2016 IPR029016 GAF domain-like TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Gene3D G3DSA:1.20.120.620 410 511 6.7E-29 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423 1 197 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423 607 646 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 PANTHER PTHR24423 663 915 1.0E-144 T 22-04-2016 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SMART SM00388 679 747 1.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF47384 675 747 2.35E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SMART SM00387 791 905 7.8E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 6.6E-97 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 TMO_RS02310 fa2611d89f4262eaf24f2d5e22194803 915 SUPERFAMILY SSF55874 737 903 5.5E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 PANTHER PTHR12815:SF11 1 756 4.9E-192 T 22-04-2016 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF01103 Surface antigen 449 756 1.0E-75 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 PIRSF PIRSF006076 1 756 9.7E-253 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 756 24.209 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF07244 Surface antigen variable number repeat 96 173 4.9E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF07244 Surface antigen variable number repeat 28 94 5.3E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF07244 Surface antigen variable number repeat 177 264 5.9E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF07244 Surface antigen variable number repeat 268 346 2.7E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Pfam PF07244 Surface antigen variable number repeat 351 421 3.2E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 Gene3D G3DSA:2.40.160.50 399 756 3.6E-17 T 22-04-2016 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 PANTHER PTHR12815 1 756 4.9E-192 T 22-04-2016 TMO_RS08915 ebbbb8980d228fd5d2e324669510087d 756 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 756 5.2E-241 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 SMART SM00342 238 321 9.6E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 PANTHER PTHR11019 186 329 2.0E-19 T 22-04-2016 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 Gene3D G3DSA:1.10.10.60 220 275 5.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 SUPERFAMILY SSF46689 275 323 2.82E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 SUPERFAMILY SSF46689 221 271 1.25E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 267 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 275 317 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 Pfam PF12833 Helix-turn-helix domain 244 322 3.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 Gene3D G3DSA:1.10.10.60 276 323 2.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06810 507f1e9df9e04ef98d7d6b68c1831293 334 PANTHER PTHR11019:SF61 186 329 2.0E-19 T 22-04-2016 TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 Gene3D G3DSA:1.10.150.130 105 208 8.6E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 Gene3D G3DSA:1.10.443.10 218 386 5.0E-18 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 PANTHER PTHR30629 1 414 8.9E-84 T 22-04-2016 TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 Pfam PF00589 Phage integrase family 219 370 1.7E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 SUPERFAMILY SSF56349 105 391 9.71E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_RS10925 d80093ccf5061ddd403fad55f8dff67b 417 PANTHER PTHR30629:SF2 1 414 8.9E-84 T 22-04-2016 TMO_RS12475 909115649c5b243cbb40c3836cb1fe0b 107 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 78 4.7E-18 T 22-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 TMO_RS12475 909115649c5b243cbb40c3836cb1fe0b 107 PANTHER PTHR34702 1 92 1.1E-21 T 22-04-2016 TMO_RS12475 909115649c5b243cbb40c3836cb1fe0b 107 PANTHER PTHR34702:SF1 1 92 1.1E-21 T 22-04-2016 TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 PANTHER PTHR22683 280 798 3.6E-235 T 22-04-2016 TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SUPERFAMILY SSF46785 737 801 1.06E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 180 3.9E-27 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SUPERFAMILY SSF52540 389 699 2.02E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Gene3D G3DSA:3.40.50.300 388 550 9.8E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Gene3D G3DSA:3.40.50.300 583 695 9.8E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 SMART SM00843 737 802 1.7E-35 T 22-04-2016 IPR018541 FtsK gamma domain TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF09397 Ftsk gamma domain 740 799 3.5E-26 T 22-04-2016 IPR018541 FtsK gamma domain TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 PANTHER PTHR22683:SF41 280 798 3.6E-235 T 22-04-2016 TMO_RS15825 ff51ab4dbed2bd9366a67d4f13d49dc6 805 Pfam PF01580 FtsK/SpoIIIE family 411 630 4.7E-65 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 19 453 2.4E-210 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:3.20.20.70 149 456 3.7E-153 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 PIRSF PIRSF018788 8 464 6.3E-222 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 PANTHER PTHR39329:SF1 8 466 4.6E-258 T 22-04-2016 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:2.30.170.30 11 61 1.1E-22 T 22-04-2016 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 Gene3D G3DSA:1.10.220.70 62 147 1.4E-35 T 22-04-2016 TMO_RS14690 3a553a8c3e80311f44f984e31640dafe 471 PANTHER PTHR39329 8 466 4.6E-258 T 22-04-2016 TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 SUPERFAMILY SSF52172 9 134 2.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 PANTHER PTHR26402 9 137 3.5E-34 T 22-04-2016 TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 PANTHER PTHR26402 260 288 3.5E-34 T 22-04-2016 TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 Gene3D G3DSA:3.40.50.2300 9 144 5.1E-36 T 22-04-2016 TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 SMART SM00448 7 119 3.9E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS28900 24b3edf9b78b6c756442dc7033b14c30 304 Pfam PF00072 Response regulator receiver domain 9 120 2.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 Gene3D G3DSA:1.20.1050.10 84 200 4.5E-47 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 SUPERFAMILY SSF52833 1 84 9.68E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 Gene3D G3DSA:3.40.30.10 1 83 3.8E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 3.4E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 PANTHER PTHR11260 1 207 1.6E-65 T 22-04-2016 TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 2.9E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 SUPERFAMILY SSF47616 78 211 9.55E-37 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS05770 40d70a6b580d8380451c2db76f2e929f 236 PANTHER PTHR11260:SF285 1 207 1.6E-65 T 22-04-2016 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 SUPERFAMILY SSF56645 10 241 1.83E-82 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 135 2.3E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 243 388 2.1E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 PANTHER PTHR10909:SF307 1 395 3.9E-272 T 22-04-2016 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:2.40.110.10 138 230 6.7E-37 T 22-04-2016 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:1.20.140.10 231 391 1.5E-43 T 22-04-2016 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 230 1.9E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 SUPERFAMILY SSF47203 246 393 4.99E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 PANTHER PTHR10909 1 395 3.9E-272 T 22-04-2016 TMO_RS02610 2a679f36fd27818893f5ef92b51e2f62 396 Gene3D G3DSA:1.10.540.10 7 137 4.2E-42 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 Pfam PF00717 Peptidase S24-like 174 239 7.8E-8 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 SUPERFAMILY SSF47413 14 80 1.49E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 Gene3D G3DSA:1.10.260.40 15 78 8.6E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 Pfam PF13560 Helix-turn-helix domain 21 76 2.3E-11 T 22-04-2016 TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 SMART SM00530 21 76 3.8E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 SUPERFAMILY SSF51306 134 256 2.88E-13 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C TMO_RS29030 dfe41b2682d471d2bcff0358e4c55549 263 Gene3D G3DSA:2.10.109.10 169 240 1.2E-11 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PANTHER PTHR30295 4 167 6.3E-53 T 22-04-2016 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 70 86 4.4E-7 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 46 62 4.4E-7 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 142 160 4.4E-7 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PIRSF PIRSF005900 3 167 2.0E-46 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 SUPERFAMILY SSF47240 11 162 8.72E-43 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 Gene3D G3DSA:1.20.1260.10 10 161 1.1E-52 T 22-04-2016 IPR012347 Ferritin-related TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 PANTHER PTHR30295:SF6 4 167 6.3E-53 T 22-04-2016 TMO_RS13565 d2c986c6226eff42c73e2a4d3b5875c1 167 Pfam PF00210 Ferritin-like domain 26 160 8.7E-24 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_RS03585 e1b089bb8d025a2edf43bc2d07b7992c 267 SUPERFAMILY SSF51735 1 251 4.99E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03585 e1b089bb8d025a2edf43bc2d07b7992c 267 Pfam PF01370 NAD dependent epimerase/dehydratase family 42 184 5.2E-8 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS03585 e1b089bb8d025a2edf43bc2d07b7992c 267 Gene3D G3DSA:3.40.50.720 1 217 1.7E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 467 636 6.1E-52 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 PANTHER PTHR11908 6 588 0.0 T 22-04-2016 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 PANTHER PTHR11908 605 792 0.0 T 22-04-2016 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 188 294 1.3E-35 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 PANTHER PTHR11908:SF85 6 588 0.0 T 22-04-2016 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 PANTHER PTHR11908:SF85 605 792 0.0 T 22-04-2016 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 SUPERFAMILY SSF54665 4 159 4.32E-46 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 159 723 4.3E-179 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 1.9E-30 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 637 786 7.6E-69 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 375 466 7.6E-69 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 SMART SM01008 20 140 1.6E-52 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 296 372 3.2E-47 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.30.365.10 129 187 3.2E-47 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 Gene3D G3DSA:3.90.1170.50 3 128 2.6E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS05920 a0c0bcdd08a991a8ee79267a3dc2d415 795 SUPERFAMILY SSF56003 132 787 9.29E-212 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 PANTHER PTHR10799:SF774 64 334 1.0E-16 T 22-04-2016 TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 SUPERFAMILY SSF55073 188 332 2.98E-32 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 Gene3D G3DSA:3.30.70.270 185 332 4.1E-36 T 22-04-2016 TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 331 1.7E-29 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 SMART SM00267 172 340 3.5E-37 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 331 1.3E-30 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29070 b2ce086981c4d1fb0df512408e8f0c83 341 PANTHER PTHR10799 64 334 1.0E-16 T 22-04-2016 TMO_RS02440 d9e8ce70c2498f2d84e42612725cdcb4 182 Pfam PF12802 MarR family 54 113 5.4E-13 T 22-04-2016 TMO_RS02440 d9e8ce70c2498f2d84e42612725cdcb4 182 SUPERFAMILY SSF46785 24 162 8.54E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02440 d9e8ce70c2498f2d84e42612725cdcb4 182 PANTHER PTHR33164 1 173 4.1E-15 T 22-04-2016 TMO_RS02440 d9e8ce70c2498f2d84e42612725cdcb4 182 Gene3D G3DSA:1.10.10.10 29 161 3.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02440 d9e8ce70c2498f2d84e42612725cdcb4 182 SMART SM00347 49 149 1.8E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS02895 4493afd633ccc58fd4c4fb0507f13951 263 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 211 2.8E-39 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS02895 4493afd633ccc58fd4c4fb0507f13951 263 PANTHER PTHR10672 27 246 4.4E-66 T 22-04-2016 TMO_RS02895 4493afd633ccc58fd4c4fb0507f13951 263 SMART SM01007 30 211 1.2E-41 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS02895 4493afd633ccc58fd4c4fb0507f13951 263 Gene3D G3DSA:3.40.225.10 27 240 5.8E-52 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS02895 4493afd633ccc58fd4c4fb0507f13951 263 SUPERFAMILY SSF53639 24 239 6.67E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 Gene3D G3DSA:3.90.1150.10 258 391 1.3E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 PANTHER PTHR11751 13 389 2.1E-209 T 22-04-2016 TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 Gene3D G3DSA:3.40.640.10 45 257 1.3E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 PANTHER PTHR11751:SF302 13 389 2.1E-209 T 22-04-2016 TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 SUPERFAMILY SSF53383 5 392 5.24E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS09775 1d183b0fbf0c685a6b30f0967d6b79c0 408 Pfam PF00155 Aminotransferase class I and II 32 384 2.2E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 PIRSF PIRSF003113 1 92 6.6E-29 T 22-04-2016 IPR002634 BolA protein TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 PANTHER PTHR12735:SF24 1 92 7.4E-28 T 22-04-2016 TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 Gene3D G3DSA:3.30.70.1500 1 85 4.3E-28 T 22-04-2016 TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 SUPERFAMILY SSF82657 1 91 1.96E-25 T 22-04-2016 IPR002634 BolA protein TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 Pfam PF01722 BolA-like protein 11 88 4.6E-29 T 22-04-2016 IPR002634 BolA protein TMO_RS01735 1f712e5a0808e4ba17f555b34acd6f81 92 PANTHER PTHR12735 1 92 7.4E-28 T 22-04-2016 TMO_RS29630 f004148132cb05a23a92e96537ab93ea 152 Pfam PF10947 Protein of unknown function (DUF2628) 16 95 1.7E-11 T 22-04-2016 IPR024399 Protein of unknown function DUF2628 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 4.4E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 PANTHER PTHR30328 5 189 1.8E-25 T 22-04-2016 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 PANTHER PTHR30328:SF18 5 189 1.8E-25 T 22-04-2016 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 SUPERFAMILY SSF46689 3 74 5.13E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 SUPERFAMILY SSF48498 82 187 3.95E-21 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 Gene3D G3DSA:1.10.10.60 4 58 3.7E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03105 a2fc198294fefdf0873c82d3f0cc536c 194 Gene3D G3DSA:1.10.357.10 59 188 7.0E-36 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 Gene3D G3DSA:3.40.190.10 141 279 1.0E-28 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 Gene3D G3DSA:3.40.190.10 13 138 7.1E-23 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 Gene3D G3DSA:3.40.190.10 280 339 7.1E-23 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 Pfam PF13416 Bacterial extracellular solute-binding protein 57 317 3.6E-34 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 PANTHER PTHR30006 1 353 9.8E-54 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 PANTHER PTHR30006:SF7 1 353 9.8E-54 T 22-04-2016 TMO_RS14340 8db18f36f7ff4a2e850f9c763da44561 353 SUPERFAMILY SSF53850 36 349 2.01E-68 T 22-04-2016 TMO_RS29390 537dc28c0f25ef04a7fa6390262af93d 168 Gene3D G3DSA:1.20.1250.20 3 158 1.1E-19 T 22-04-2016 TMO_RS29390 537dc28c0f25ef04a7fa6390262af93d 168 PANTHER PTHR11360:SF115 1 165 1.1E-50 T 22-04-2016 TMO_RS29390 537dc28c0f25ef04a7fa6390262af93d 168 PANTHER PTHR11360 1 165 1.1E-50 T 22-04-2016 TMO_RS29390 537dc28c0f25ef04a7fa6390262af93d 168 SUPERFAMILY SSF103473 2 158 1.96E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS29390 537dc28c0f25ef04a7fa6390262af93d 168 Pfam PF07690 Major Facilitator Superfamily 4 160 1.6E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 156 700 1.2E-165 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 466 616 2.6E-46 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 140 3.7E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 295 371 7.9E-46 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 129 185 7.9E-46 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 SUPERFAMILY SSF56003 132 765 1.83E-191 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 PANTHER PTHR11908 2 574 2.0E-272 T 22-04-2016 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 PANTHER PTHR11908 591 771 2.0E-272 T 22-04-2016 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.90.1170.50 6 128 5.7E-39 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 186 293 1.1E-30 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 PANTHER PTHR11908:SF85 2 574 2.0E-272 T 22-04-2016 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 PANTHER PTHR11908:SF85 591 771 2.0E-272 T 22-04-2016 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 SMART SM01008 20 140 1.5E-46 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 617 765 2.4E-60 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 Gene3D G3DSA:3.30.365.10 374 465 2.4E-60 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS03310 2b248607fe16a540710af2dea7b21d0a 773 SUPERFAMILY SSF54665 5 162 1.44E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 Pfam PF01575 MaoC like domain 16 121 2.6E-7 T 22-04-2016 IPR002539 MaoC-like domain TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 PANTHER PTHR13078 8 354 2.6E-128 T 22-04-2016 TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 PANTHER PTHR13078:SF18 8 354 2.6E-128 T 22-04-2016 TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 SUPERFAMILY SSF54637 4 152 6.31E-40 T 22-04-2016 IPR029069 HotDog domain TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 Gene3D G3DSA:3.10.129.10 191 355 2.1E-29 T 22-04-2016 IPR029069 HotDog domain TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 Gene3D G3DSA:3.10.129.10 3 152 2.8E-36 T 22-04-2016 IPR029069 HotDog domain TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 PIRSF PIRSF021494 2 353 5.3E-134 T 22-04-2016 IPR016790 Thiol ester hydratase, Rv0216, predicted KEGG: 00630+4.2.1.148|KEGG: 00660+4.2.1.148|KEGG: 00720+4.2.1.148|MetaCyc: PWY-5741|MetaCyc: PWY-5744|MetaCyc: PWY-6728 TMO_RS16500 a93afc40188c72ffb379dd41efffd8ec 355 SUPERFAMILY SSF54637 193 355 8.14E-33 T 22-04-2016 IPR029069 HotDog domain TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 SUPERFAMILY SSF46785 6 96 1.22E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 4.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 4.2E-9 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PANTHER PTHR33154:SF9 1 105 1.6E-27 T 22-04-2016 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 SMART SM00418 15 93 6.2E-22 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 PANTHER PTHR33154 1 105 1.6E-27 T 22-04-2016 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 Pfam PF01022 Bacterial regulatory protein, arsR family 22 66 1.6E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS06345 5bb7337a490f1da0feaa831db02caed8 113 Gene3D G3DSA:1.10.10.10 2 97 2.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 9 146 9.3E-49 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 Pfam PF02502 Ribose/Galactose Isomerase 9 146 6.5E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 Gene3D G3DSA:3.40.1400.10 8 146 3.6E-61 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 PANTHER PTHR30345 1 146 9.9E-66 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 SUPERFAMILY SSF89623 7 146 3.79E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 PIRSF PIRSF005384 7 147 1.0E-54 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09185 44fa73dee432df4b34a580211f069cf2 147 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 9 146 8.7E-51 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 PANTHER PTHR21026:SF2 1 54 2.8E-25 T 22-04-2016 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 PANTHER PTHR21026 1 54 2.8E-25 T 22-04-2016 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 Pfam PF01783 Ribosomal L32p protein family 2 55 6.5E-30 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 SUPERFAMILY SSF57829 1 54 1.4E-24 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.277 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 TMO_RS09115 557265aa5bce569ec8ec4f5df29b458f 61 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.2E-28 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 Gene3D G3DSA:3.40.50.720 2 180 2.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 Gene3D G3DSA:3.90.25.10 181 313 8.8E-31 T 22-04-2016 TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 SUPERFAMILY SSF51735 1 315 4.18E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 PANTHER PTHR10366 3 331 8.0E-127 T 22-04-2016 TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 PANTHER PTHR10366:SF41 3 331 8.0E-127 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 TMO_RS03580 c8426ef221f8b6e90532af3ff2b2d074 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 297 4.7E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 26 476 9.4E-128 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 PANTHER PTHR30576 3 478 4.6E-113 T 22-04-2016 TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Pfam PF02397 Bacterial sugar transferase 285 469 7.1E-58 T 22-04-2016 IPR003362 Bacterial sugar transferase TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Pfam PF13727 CoA-binding domain 74 246 7.9E-25 T 22-04-2016 TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 474 9.9E-122 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 SUPERFAMILY SSF51735 150 238 2.86E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 PANTHER PTHR30576:SF0 3 478 4.6E-113 T 22-04-2016 TMO_RS08745 f0faaaf1dc7bd6ff461c3eefdd0bab99 478 Gene3D G3DSA:3.40.50.720 150 237 8.0E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 SUPERFAMILY SSF46785 13 99 4.27E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 SUPERFAMILY SSF53850 100 311 2.64E-32 T 22-04-2016 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 4.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 4.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 4.5E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 PANTHER PTHR30126 13 320 1.2E-49 T 22-04-2016 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 Pfam PF03466 LysR substrate binding domain 100 305 6.6E-29 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:1.10.10.10 13 98 1.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:3.40.190.10 102 189 1.1E-11 T 22-04-2016 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 Gene3D G3DSA:3.40.190.10 190 272 3.1E-11 T 22-04-2016 TMO_RS14445 cc43e42e2d40250aff77075363f335e3 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 8.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS15445 43600af2829aa88a93bd97065c7bf4d9 297 PANTHER PTHR11795:SF398 1 297 2.1E-120 T 22-04-2016 TMO_RS15445 43600af2829aa88a93bd97065c7bf4d9 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 3.2E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS15445 43600af2829aa88a93bd97065c7bf4d9 297 PANTHER PTHR11795 1 297 2.1E-120 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Pfam PF01546 Peptidase family M20/M25/M40 74 378 1.2E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Gene3D G3DSA:3.40.630.10 324 381 3.7E-65 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Gene3D G3DSA:3.40.630.10 5 195 3.7E-65 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 SUPERFAMILY SSF55031 187 295 2.69E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 382 48.414 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 378 1.4E-118 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Pfam PF07687 Peptidase dimerisation domain 183 285 2.4E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 PANTHER PTHR11014 7 385 8.0E-70 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 SUPERFAMILY SSF53187 300 380 4.65E-59 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 SUPERFAMILY SSF53187 6 186 4.65E-59 T 22-04-2016 TMO_RS13640 9e3161bc53e13dd9d8edc490c6de78d1 393 Gene3D G3DSA:3.30.70.360 196 296 7.8E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 PANTHER PTHR13078 1 144 5.0E-43 T 22-04-2016 TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 Pfam PF01575 MaoC like domain 23 119 2.8E-24 T 22-04-2016 IPR002539 MaoC-like domain TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 PRINTS PR01483 Fatty acid synthase signature 29 51 1.3E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 PRINTS PR01483 Fatty acid synthase signature 51 72 1.3E-6 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 Gene3D G3DSA:3.10.129.10 11 142 1.7E-46 T 22-04-2016 IPR029069 HotDog domain TMO_RS14580 25b453d265d3f1f1d9a2a879fa389236 152 SUPERFAMILY SSF54637 8 145 1.33E-43 T 22-04-2016 IPR029069 HotDog domain TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00571 CBS domain 94 139 6.2E-11 T 22-04-2016 IPR000644 CBS domain TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00571 CBS domain 147 199 1.5E-5 T 22-04-2016 IPR000644 CBS domain TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 453 2.6E-193 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 PANTHER PTHR11911:SF6 1 278 4.3E-234 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 PANTHER PTHR11911:SF6 296 484 4.3E-234 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM01240 5 471 0.0 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 Gene3D G3DSA:3.20.20.70 3 483 1.5E-201 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 484 84.945 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 471 2.2E-160 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SUPERFAMILY SSF51412 214 475 1.1E-122 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SUPERFAMILY SSF51412 2 88 1.1E-122 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM00116 155 203 9.4E-6 T 22-04-2016 IPR000644 CBS domain TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SMART SM00116 94 142 1.3E-11 T 22-04-2016 IPR000644 CBS domain TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 SUPERFAMILY SSF54631 93 201 1.1E-30 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 PIRSF PIRSF000130 1 485 1.4E-205 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 PANTHER PTHR11911 1 278 4.3E-234 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 PANTHER PTHR11911 296 484 4.3E-234 T 22-04-2016 TMO_RS07240 da2961a6efa4f6ad3e133624d6c58839 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 TMO_RS01940 ba527c290b36e6f39fe229f7087705a1 389 Pfam PF13763 Domain of unknown function (DUF4167) 17 80 2.1E-24 T 22-04-2016 IPR025430 Domain of unknown function DUF4167 TMO_RS02740 4ceaa1a98d8819078f899cdac6bad5a8 154 Gene3D G3DSA:3.40.630.30 4 153 6.8E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS02740 4ceaa1a98d8819078f899cdac6bad5a8 154 SUPERFAMILY SSF55729 2 147 3.77E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS02740 4ceaa1a98d8819078f899cdac6bad5a8 154 PANTHER PTHR23091 1 144 8.5E-24 T 22-04-2016 TMO_RS02740 4ceaa1a98d8819078f899cdac6bad5a8 154 Pfam PF00583 Acetyltransferase (GNAT) family 63 144 8.4E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 PANTHER PTHR30522:SF0 1 264 2.0E-103 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 165 223 1.4E-10 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 17 90 5.1E-27 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 Gene3D G3DSA:1.10.287.1080 11 63 7.6E-7 T 22-04-2016 TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 Gene3D G3DSA:1.10.287.1080 132 217 9.9E-15 T 22-04-2016 TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 TIGRFAM TIGR00444 mazG: MazG family protein 1 258 1.8E-86 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 SUPERFAMILY SSF101386 136 232 4.3E-24 T 22-04-2016 TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 SUPERFAMILY SSF101386 3 92 6.17E-22 T 22-04-2016 TMO_RS08515 247652c2a38ec5dcf78b6935f9cde3d5 279 PANTHER PTHR30522 1 264 2.0E-103 T 22-04-2016 TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 Gene3D G3DSA:3.90.960.10 8 162 2.4E-52 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 PANTHER PTHR30411:SF0 11 163 2.0E-51 T 22-04-2016 TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 SUPERFAMILY SSF55826 11 161 1.19E-41 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 PANTHER PTHR30411 11 163 2.0E-51 T 22-04-2016 TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 PIRSF PIRSF006181 6 163 4.8E-49 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 161 6.3E-51 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC TMO_RS02640 d05da2bfc663c434260f22d3825a4c07 163 Pfam PF04073 Aminoacyl-tRNA editing domain 40 152 1.9E-24 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 PANTHER PTHR10909 10 387 1.6E-280 T 22-04-2016 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 4.1E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 SUPERFAMILY SSF47203 235 387 3.54E-48 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 4.6E-39 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 2.0E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:2.40.110.10 128 223 7.3E-42 T 22-04-2016 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 SUPERFAMILY SSF56645 5 249 3.8E-88 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:1.10.540.10 5 126 2.9E-45 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 PANTHER PTHR10909:SF332 10 387 1.6E-280 T 22-04-2016 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 Gene3D G3DSA:1.20.140.10 224 387 2.4E-66 T 22-04-2016 TMO_RS12990 e8de474d12e32f271594f82efdbd50c2 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 PANTHER PTHR30061 1 436 2.7E-103 T 22-04-2016 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 Gene3D G3DSA:3.40.190.10 166 351 4.4E-29 T 22-04-2016 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 SUPERFAMILY SSF53850 43 428 8.45E-66 T 22-04-2016 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 PANTHER PTHR30061:SF7 1 436 2.7E-103 T 22-04-2016 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 Gene3D G3DSA:3.40.190.10 37 165 1.6E-9 T 22-04-2016 TMO_RS16270 8ab562922402db4c5ad0f5be82b7f9e6 440 Pfam PF13416 Bacterial extracellular solute-binding protein 50 360 1.3E-35 T 22-04-2016 TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 1.0E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 Gene3D G3DSA:1.10.3720.10 86 294 1.7E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 SUPERFAMILY SSF161098 91 298 5.1E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 67 9.0E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 PANTHER PTHR30465 8 298 3.0E-131 T 22-04-2016 TMO_RS15205 582e3c0e4af16ba855e7cb27eb0fcee9 298 PANTHER PTHR30465:SF10 8 298 3.0E-131 T 22-04-2016 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 Pfam PF01386 Ribosomal L25p family 7 95 3.0E-24 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 SUPERFAMILY SSF50715 6 194 3.14E-52 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 188 3.6E-28 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 186 1.3E-41 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 187 27.788 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 29 98 1.0E-8 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 PANTHER PTHR33284 7 204 4.6E-57 T 22-04-2016 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 Gene3D G3DSA:2.40.240.10 6 97 2.3E-26 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 TMO_RS01585 fc590d1ad54bdc03cb3920bf48da69bf 204 Gene3D G3DSA:2.170.120.20 101 194 3.0E-30 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Pfam PF01564 Spermine/spermidine synthase 13 248 3.5E-64 T 22-04-2016 TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 SUPERFAMILY SSF53335 11 289 6.4E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 TIGRFAM TIGR00417 speE: spermidine synthase 13 281 1.8E-79 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 12 290 35.653 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Gene3D G3DSA:2.30.140.10 11 64 2.4E-17 T 22-04-2016 TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 89 102 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 Gene3D G3DSA:3.40.50.150 65 289 8.7E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS08135 e0ea5c10af9fcc1b89d3c814665f9d3d 292 PANTHER PTHR11558 13 290 4.0E-95 T 22-04-2016 TMO_RS16470 1e1290adc9f9d38b11882ecd0b616a59 431 PANTHER PTHR11785 7 366 4.6E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 TMO_RS16470 1e1290adc9f9d38b11882ecd0b616a59 431 Pfam PF13520 Amino acid permease 12 365 1.2E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 TMO_RS16470 1e1290adc9f9d38b11882ecd0b616a59 431 PIRSF PIRSF006060 1 408 5.5E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.5E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 1.5E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 329 348 1.5E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 1.5E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 1.5E-12 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PANTHER PTHR22773:SF49 3 473 5.6E-130 T 22-04-2016 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 Pfam PF00361 Proton-conducting membrane transporter 131 422 1.2E-67 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS12500 78d748cf0c46b93f97d7a444961b7c24 493 PANTHER PTHR22773 3 473 5.6E-130 T 22-04-2016 TMO_RS10650 bab4d59db96c3b1598eb29f5963e73f5 377 PANTHER PTHR30298 1 377 4.0E-97 T 22-04-2016 TMO_RS10650 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF13808 DDE_Tnp_1-associated 14 101 1.9E-26 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal TMO_RS10650 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF01609 Transposase DDE domain 109 347 1.9E-19 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_RS07550 bab4d59db96c3b1598eb29f5963e73f5 377 PANTHER PTHR30298 1 377 4.0E-97 T 22-04-2016 TMO_RS07550 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF13808 DDE_Tnp_1-associated 14 101 1.9E-26 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal TMO_RS07550 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF01609 Transposase DDE domain 109 347 1.9E-19 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_RS04410 bab4d59db96c3b1598eb29f5963e73f5 377 PANTHER PTHR30298 1 377 4.0E-97 T 22-04-2016 TMO_RS04410 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF13808 DDE_Tnp_1-associated 14 101 1.9E-26 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal TMO_RS04410 bab4d59db96c3b1598eb29f5963e73f5 377 Pfam PF01609 Transposase DDE domain 109 347 1.9E-19 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 TMO_RS16190 087cc23abccb66c1e05384a1e4931de6 327 PANTHER PTHR10242 100 286 4.9E-24 T 22-04-2016 TMO_RS16190 087cc23abccb66c1e05384a1e4931de6 327 SMART SM00478 134 305 1.7E-5 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS16190 087cc23abccb66c1e05384a1e4931de6 327 Gene3D G3DSA:1.10.340.30 134 249 1.1E-23 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS16190 087cc23abccb66c1e05384a1e4931de6 327 SUPERFAMILY SSF48150 125 286 3.31E-30 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS16190 087cc23abccb66c1e05384a1e4931de6 327 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 137 285 4.6E-9 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS29315 f079aded77617d81f5bd1052c5d44f11 112 Pfam PF13487 HD domain 6 41 3.4E-10 T 22-04-2016 TMO_RS29315 f079aded77617d81f5bd1052c5d44f11 112 Gene3D G3DSA:1.10.3210.10 6 88 1.2E-5 T 22-04-2016 IPR006674 HD domain TMO_RS29315 f079aded77617d81f5bd1052c5d44f11 112 SUPERFAMILY SSF109604 12 90 6.91E-13 T 22-04-2016 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 PANTHER PTHR32089 79 334 1.4E-48 T 22-04-2016 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 196 225 1.5E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 83 112 1.5E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 SMART SM00283 69 330 7.1E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 SUPERFAMILY SSF58104 77 322 4.58E-49 T 22-04-2016 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 114 318 3.6E-32 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 Gene3D G3DSA:1.10.287.950 86 293 3.9E-41 T 22-04-2016 TMO_RS17595 4e9d32350022c6ad4aed778d02f26a1b 451 Pfam PF13682 Chemoreceptor zinc-binding domain 343 408 4.7E-13 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 PANTHER PTHR30126 1 254 1.9E-62 T 22-04-2016 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 Gene3D G3DSA:1.10.10.10 1 81 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 Gene3D G3DSA:3.40.190.10 82 193 1.3E-19 T 22-04-2016 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 PANTHER PTHR30126:SF20 1 254 1.9E-62 T 22-04-2016 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 Pfam PF03466 LysR substrate binding domain 92 282 6.0E-32 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 SUPERFAMILY SSF46785 1 110 1.14E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 SUPERFAMILY SSF53850 91 280 9.77E-29 T 22-04-2016 TMO_RS16680 029bfd4d725727e5f235095a5d84ee8d 285 Gene3D G3DSA:3.40.190.10 194 254 4.8E-13 T 22-04-2016 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 PANTHER PTHR11207 10 233 4.9E-74 T 22-04-2016 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 SMART SM00535 25 163 2.3E-54 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 SUPERFAMILY SSF54768 125 233 2.2E-24 T 22-04-2016 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 233 3.6E-70 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 Pfam PF00035 Double-stranded RNA binding motif 168 231 2.2E-11 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 Pfam PF14622 Ribonuclease-III-like 23 154 4.1E-31 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 SUPERFAMILY SSF69065 7 169 1.19E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 Gene3D G3DSA:1.10.1520.10 11 159 8.7E-44 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 231 28.128 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 ProSitePatterns PS00517 Ribonuclease III family signature. 52 60 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 Gene3D G3DSA:3.30.160.20 166 232 2.7E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain TMO_RS08025 aa158ec4e6054e81177f7fcf01e5cc95 242 SMART SM00358 168 235 1.4E-18 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain TMO_RS24590 b0defb4665b93456b8eae3093ef94a74 306 PANTHER PTHR32196 40 306 5.1E-108 T 22-04-2016 TMO_RS24590 b0defb4665b93456b8eae3093ef94a74 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 297 6.2E-31 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS24590 b0defb4665b93456b8eae3093ef94a74 306 PANTHER PTHR32196:SF27 40 306 5.1E-108 T 22-04-2016 TMO_RS04390 bc4faf96de525ad2abd6afe554db404a 281 PANTHER PTHR30177:SF2 7 281 5.1E-120 T 22-04-2016 TMO_RS04390 bc4faf96de525ad2abd6afe554db404a 281 PANTHER PTHR30177 7 281 5.1E-120 T 22-04-2016 TMO_RS04390 bc4faf96de525ad2abd6afe554db404a 281 Gene3D G3DSA:1.10.3720.10 78 271 1.7E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04390 bc4faf96de525ad2abd6afe554db404a 281 SUPERFAMILY SSF161098 87 270 1.15E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04390 bc4faf96de525ad2abd6afe554db404a 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 269 2.7E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS11335 3d4eec21ecfa76494a75f464fb9b293c 76 Pfam PF12728 Helix-turn-helix domain 6 57 2.2E-6 T 22-04-2016 TMO_RS11335 3d4eec21ecfa76494a75f464fb9b293c 76 Gene3D G3DSA:1.10.10.10 19 56 8.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11335 3d4eec21ecfa76494a75f464fb9b293c 76 SUPERFAMILY SSF46955 5 56 1.1E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS11430 4e073a5a78adfd76804ae0bd116d190d 240 SUPERFAMILY SSF46689 2 73 3.79E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS11430 4e073a5a78adfd76804ae0bd116d190d 240 PANTHER PTHR30055:SF23 1 109 7.9E-12 T 22-04-2016 TMO_RS11430 4e073a5a78adfd76804ae0bd116d190d 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 8.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS11430 4e073a5a78adfd76804ae0bd116d190d 240 PANTHER PTHR30055 1 109 7.9E-12 T 22-04-2016 TMO_RS11430 4e073a5a78adfd76804ae0bd116d190d 240 Gene3D G3DSA:1.10.357.10 4 183 2.8E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 Gene3D G3DSA:1.10.10.10 11 96 6.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 13 345 28.322 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 PANTHER PTHR34824 2 352 6.6E-104 T 22-04-2016 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 15 351 6.8E-94 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 Gene3D G3DSA:3.30.450.40 189 352 2.0E-32 T 22-04-2016 IPR029016 GAF domain-like TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 PIRSF PIRSF005485 11 353 4.1E-104 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 Pfam PF01628 HrcA protein C terminal domain 117 338 3.6E-54 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 SUPERFAMILY SSF46785 14 94 7.69E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17485 90bb2c6ae3c51f9d089d5a53071a76c0 353 SUPERFAMILY SSF55781 84 352 1.91E-54 T 22-04-2016 IPR029016 GAF domain-like TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PANTHER PTHR22855 1 284 4.5E-137 T 22-04-2016 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PANTHER PTHR22855:SF17 1 284 4.5E-137 T 22-04-2016 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 3.0E-112 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 38.299 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 Pfam PF01039 Carboxyl transferase domain 101 307 3.8E-16 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 SUPERFAMILY SSF52096 26 283 2.95E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 4.4E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 4.4E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 4.4E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 4.4E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 4.4E-37 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS16320 a281cadb69399412d73c56205e70dd4e 339 Gene3D G3DSA:3.90.226.10 21 282 1.0E-65 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 SUPERFAMILY SSF51283 9 151 4.32E-49 T 22-04-2016 IPR029054 dUTPase-like TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 152 33.831 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 PANTHER PTHR11241 11 151 1.4E-48 T 22-04-2016 TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 Pfam PF00692 dUTPase 19 151 4.7E-31 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 Gene3D G3DSA:2.70.40.10 14 151 3.8E-53 T 22-04-2016 IPR029054 dUTPase-like TMO_RS17915 fe823ddce809ae3d3fe94ea16277f2fe 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 151 7.8E-51 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 PANTHER PTHR14413 1 129 4.5E-66 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 Pfam PF01196 Ribosomal protein L17 20 116 8.9E-38 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 PANTHER PTHR14413:SF5 1 129 4.5E-66 T 22-04-2016 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 TIGRFAM TIGR00059 L17: ribosomal protein bL17 8 117 1.6E-46 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 SUPERFAMILY SSF64263 1 119 4.71E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 Gene3D G3DSA:3.90.1030.10 1 117 2.5E-52 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13130 83f42d9072f1210e356f787287975f51 139 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.178 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 PANTHER PTHR33567:SF3 8 394 3.0E-95 T 22-04-2016 TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 PANTHER PTHR33567 8 394 3.0E-95 T 22-04-2016 TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 TIGRFAM TIGR00937 2A51: chromate efflux transporter 16 392 2.0E-83 T 22-04-2016 IPR014047 Chromate transporter, long chain TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 PIRSF PIRSF004810 2 399 6.8E-106 T 22-04-2016 IPR014047 Chromate transporter, long chain TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 Pfam PF02417 Chromate transporter 228 392 1.1E-27 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_RS03315 628ba2d43ac81ae6fee9075fa2f579ae 399 Pfam PF02417 Chromate transporter 11 172 1.9E-28 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 Gene3D G3DSA:3.40.190.10 190 352 5.5E-10 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 PANTHER PTHR30006:SF12 56 243 7.7E-106 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 PANTHER PTHR30006:SF12 263 431 7.7E-106 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 PIRSF PIRSF029172 7 433 6.5E-142 T 22-04-2016 IPR027020 Protein ynjB TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 Gene3D G3DSA:3.40.190.10 65 188 1.9E-14 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 Gene3D G3DSA:3.40.190.10 353 379 1.9E-14 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 PANTHER PTHR30006 56 243 7.7E-106 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 PANTHER PTHR30006 263 431 7.7E-106 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 SUPERFAMILY SSF53850 66 429 1.63E-35 T 22-04-2016 TMO_RS16810 5ef25830421cd0a5e44a483c09a81cc9 434 Pfam PF13416 Bacterial extracellular solute-binding protein 86 385 1.3E-28 T 22-04-2016 TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 SMART SM00091 13 81 6.6E-5 T 22-04-2016 IPR000014 PAS domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 Gene3D G3DSA:3.30.450.20 18 135 6.5E-19 T 22-04-2016 TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 PANTHER PTHR10799 87 304 4.7E-27 T 22-04-2016 TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 Pfam PF08448 PAS fold 19 123 3.6E-13 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 SUPERFAMILY SSF55073 144 305 1.88E-44 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 128 1.7E-14 T 22-04-2016 IPR000014 PAS domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 302 8.1E-45 T 22-04-2016 IPR000160 GGDEF domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 304 5.4E-48 T 22-04-2016 IPR000160 GGDEF domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 PANTHER PTHR10799:SF750 87 304 4.7E-27 T 22-04-2016 TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 SMART SM00267 128 306 9.3E-59 T 22-04-2016 IPR000160 GGDEF domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 SUPERFAMILY SSF55785 17 113 1.77E-15 T 22-04-2016 IPR000014 PAS domain TMO_RS06320 f8f74b6d4e499a70a0af165127cb54a7 312 Gene3D G3DSA:3.30.70.270 142 305 8.2E-51 T 22-04-2016 TMO_RS04665 7e2a956cb9d433fedf21ee681bf1425a 341 PANTHER PTHR11795 1 56 1.0E-65 T 22-04-2016 TMO_RS04665 7e2a956cb9d433fedf21ee681bf1425a 341 PANTHER PTHR11795 94 336 1.0E-65 T 22-04-2016 TMO_RS04665 7e2a956cb9d433fedf21ee681bf1425a 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 323 3.8E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 SUPERFAMILY SSF53383 23 370 6.05E-55 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 PANTHER PTHR11808:SF45 2 375 4.0E-54 T 22-04-2016 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 PIRSF PIRSF001434 1 374 4.0E-70 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 Gene3D G3DSA:3.40.640.10 2 233 3.2E-40 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 Gene3D G3DSA:3.90.1150.10 242 370 9.0E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 370 1.2E-46 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS14525 a3c302fbe61ed2730e5cfdad8296db33 378 PANTHER PTHR11808 2 375 4.0E-54 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 263 35.678 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 Gene3D G3DSA:3.20.20.70 4 265 4.2E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 PANTHER PTHR22854:SF2 6 264 7.1E-100 T 22-04-2016 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 6 261 2.6E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 SUPERFAMILY SSF51366 12 263 2.59E-85 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 PANTHER PTHR22854 6 264 7.1E-100 T 22-04-2016 TMO_RS08845 7c8af5a93adaf2350b00bc1d5233fc5a 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 57 75 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 TMO_RS01135 12a9dd8d223a808d700310553e26ddc6 142 Pfam PF08837 Protein of unknown function (DUF1810) 8 141 1.3E-52 T 22-04-2016 IPR014937 Protein of unknown function DUF1810 TMO_RS01135 12a9dd8d223a808d700310553e26ddc6 142 PIRSF PIRSF008546 3 142 9.4E-53 T 22-04-2016 IPR014937 Protein of unknown function DUF1810 TMO_RS01135 12a9dd8d223a808d700310553e26ddc6 142 PANTHER PTHR41377 1 142 6.7E-50 T 22-04-2016 TMO_RS01135 12a9dd8d223a808d700310553e26ddc6 142 SUPERFAMILY SSF140736 6 141 1.83E-54 T 22-04-2016 TMO_RS01135 12a9dd8d223a808d700310553e26ddc6 142 PANTHER PTHR41377:SF1 1 142 6.7E-50 T 22-04-2016 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 SUPERFAMILY SSF55874 339 498 5.63E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 Gene3D G3DSA:3.30.565.10 346 499 2.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PANTHER PTHR24423:SF477 212 500 3.5E-38 T 22-04-2016 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PANTHER PTHR24423:SF477 3 14 3.5E-38 T 22-04-2016 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 497 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.2E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 SMART SM00387 386 500 1.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 SUPERFAMILY SSF47384 257 330 1.41E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 499 2.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PANTHER PTHR24423 212 500 3.5E-38 T 22-04-2016 TMO_RS10360 23edc2520c261bc74303ba1abfd8665f 500 PANTHER PTHR24423 3 14 3.5E-38 T 22-04-2016 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 SMART SM00448 14 139 5.8E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 Pfam PF01339 CheB methylesterase 224 402 2.9E-51 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 Pfam PF00072 Response regulator receiver domain 16 125 2.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 PANTHER PTHR24421 15 408 1.5E-112 T 22-04-2016 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 SUPERFAMILY SSF52172 12 126 1.27E-26 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 PIRSF PIRSF000876 11 410 4.8E-111 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 SUPERFAMILY SSF52738 221 408 8.76E-59 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 14 408 32.926 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 Gene3D G3DSA:3.40.50.180 220 407 6.4E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 Gene3D G3DSA:3.40.50.2300 13 143 2.7E-29 T 22-04-2016 TMO_RS06170 613e76719711c584c3184caf9d1ce268 411 PANTHER PTHR24421:SF16 15 408 1.5E-112 T 22-04-2016 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 42 112 1.9E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 59 75 1.5E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 88 103 1.5E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 75 88 1.5E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PRINTS PR00956 Flagellar motor switch protein FliN signature 42 58 1.5E-22 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PANTHER PTHR30034:SF1 38 116 2.5E-18 T 22-04-2016 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 SUPERFAMILY SSF101801 39 115 3.14E-23 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 Gene3D G3DSA:2.30.330.10 35 115 4.5E-31 T 22-04-2016 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 PANTHER PTHR30034 38 116 2.5E-18 T 22-04-2016 TMO_RS06265 b03a4b217ac66d1b2331683327d833c2 117 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 40 114 3.9E-30 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 TMO_RS03065 655bf3a5d992a24802d87676f23923d0 378 Pfam PF05987 Bacterial protein of unknown function (DUF898) 207 368 3.2E-7 T 22-04-2016 IPR010295 Protein of unknown function DUF898 TMO_RS03065 655bf3a5d992a24802d87676f23923d0 378 Pfam PF05987 Bacterial protein of unknown function (DUF898) 16 223 2.0E-56 T 22-04-2016 IPR010295 Protein of unknown function DUF898 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:3.40.190.10 82 187 4.1E-17 T 22-04-2016 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 PANTHER PTHR30579 1 257 8.1E-78 T 22-04-2016 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 SUPERFAMILY SSF53850 87 281 5.02E-25 T 22-04-2016 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:3.40.190.10 188 237 2.0E-9 T 22-04-2016 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 PANTHER PTHR30579:SF0 1 257 8.1E-78 T 22-04-2016 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 Gene3D G3DSA:1.10.10.10 2 81 1.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 SUPERFAMILY SSF46785 1 109 6.94E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12380 4b2d96008229a9bbfa93639404717471 290 Pfam PF03466 LysR substrate binding domain 86 266 2.3E-27 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 SUPERFAMILY SSF52833 3 84 2.89E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 5.0E-36 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 Gene3D G3DSA:3.40.30.10 3 74 8.5E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 Pfam PF00462 Glutaredoxin 4 64 9.1E-21 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 47 60 5.7E-16 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 61 74 5.7E-16 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 PRINTS PR00160 Glutaredoxin signature 4 22 5.7E-16 T 22-04-2016 IPR014025 Glutaredoxin subgroup TMO_RS01830 071855ae02000a099f4aaa23483e0a11 86 PANTHER PTHR10168 4 86 1.5E-27 T 22-04-2016 TMO_RS17145 b6f95eb8bd4ccec4ef602cc35d578583 317 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 50 313 55.546 T 22-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein TMO_RS17145 b6f95eb8bd4ccec4ef602cc35d578583 317 PANTHER PTHR31756 40 310 3.1E-96 T 22-04-2016 TMO_RS17145 b6f95eb8bd4ccec4ef602cc35d578583 317 Pfam PF03618 Kinase/pyrophosphorylase 52 306 2.1E-91 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 TMO_RS17145 b6f95eb8bd4ccec4ef602cc35d578583 317 PANTHER PTHR31756:SF3 40 310 3.1E-96 T 22-04-2016 TMO_RS16145 0e0e02adae8a743acbc3848d49e30591 141 PANTHER PTHR34310:SF3 5 123 9.1E-49 T 22-04-2016 TMO_RS16145 0e0e02adae8a743acbc3848d49e30591 141 PANTHER PTHR34310 5 123 9.1E-49 T 22-04-2016 TMO_RS16145 0e0e02adae8a743acbc3848d49e30591 141 Pfam PF04248 Domain of unknown function (DUF427) 25 117 7.0E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 TMO_RS01955 ecc910927c490e74f3441304efdcaf3a 475 Gene3D G3DSA:2.70.70.10 290 424 2.1E-53 T 22-04-2016 TMO_RS01955 ecc910927c490e74f3441304efdcaf3a 475 SUPERFAMILY SSF51261 187 423 1.52E-72 T 22-04-2016 IPR011055 Duplicated hybrid motif TMO_RS01955 ecc910927c490e74f3441304efdcaf3a 475 Pfam PF01551 Peptidase family M23 328 422 2.6E-36 T 22-04-2016 IPR016047 Peptidase M23 TMO_RS01955 ecc910927c490e74f3441304efdcaf3a 475 PANTHER PTHR21666 202 441 3.7E-63 T 22-04-2016 TMO_RS01955 ecc910927c490e74f3441304efdcaf3a 475 PANTHER PTHR21666:SF221 202 441 3.7E-63 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 PANTHER PTHR13774:SF17 1 236 4.0E-27 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 Gene3D G3DSA:3.10.310.10 128 247 1.7E-14 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 PANTHER PTHR13774 1 236 4.0E-27 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 Pfam PF02567 Phenazine biosynthesis-like protein 8 222 1.6E-17 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 SUPERFAMILY SSF54506 1 262 1.05E-36 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 Gene3D G3DSA:3.10.310.10 1 121 1.9E-22 T 22-04-2016 TMO_RS04610 3334aaf272be2917fea3a5dc6157c082 262 PIRSF PIRSF016184 1 260 1.5E-20 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS07235 6e6fd6e2bd3a71af229de39c54ec03fd 271 PANTHER PTHR10920 43 254 1.4E-104 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 TMO_RS07235 6e6fd6e2bd3a71af229de39c54ec03fd 271 SUPERFAMILY SSF53335 72 253 8.76E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07235 6e6fd6e2bd3a71af229de39c54ec03fd 271 Pfam PF01728 FtsJ-like methyltransferase 73 252 2.7E-56 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TMO_RS07235 6e6fd6e2bd3a71af229de39c54ec03fd 271 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 53 252 30.856 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 TMO_RS07235 6e6fd6e2bd3a71af229de39c54ec03fd 271 Gene3D G3DSA:3.40.50.150 40 258 1.4E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 Pfam PF06144 DNA polymerase III, delta subunit 24 190 2.5E-8 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 323 9.1E-52 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 SUPERFAMILY SSF48019 216 334 1.48E-15 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 Gene3D G3DSA:1.10.8.60 144 226 4.4E-12 T 22-04-2016 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 PANTHER PTHR34388 1 344 1.7E-42 T 22-04-2016 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 Gene3D G3DSA:1.20.272.20 227 323 3.5E-7 T 22-04-2016 TMO_RS17225 3265e4783e18ab7370a48af8654727c9 344 SUPERFAMILY SSF52540 20 209 4.51E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 SUPERFAMILY SSF55073 245 431 1.08E-40 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 PANTHER PTHR11920:SF257 241 391 2.2E-28 T 22-04-2016 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 PANTHER PTHR11920:SF257 13 26 2.2E-28 T 22-04-2016 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 SMART SM00044 212 416 2.4E-6 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 PANTHER PTHR11920 13 26 2.2E-28 T 22-04-2016 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 Gene3D G3DSA:3.30.70.1230 247 430 1.2E-25 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 PANTHER PTHR11920 241 391 2.2E-28 T 22-04-2016 TMO_RS15290 c04aad6d8ef2564fbcf36f7800ac59ab 433 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 247 425 2.5E-19 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 Gene3D G3DSA:3.30.70.260 269 331 4.4E-5 T 22-04-2016 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF13840 ACT domain 336 398 1.1E-15 T 22-04-2016 IPR027795 GATS-like ACT domain TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.0E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 3.0E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 3.0E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 56 402 1.7E-122 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF53633 3 243 6.68E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF55021 330 404 1.65E-22 T 22-04-2016 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 SUPERFAMILY SSF55021 247 326 3.05E-22 T 22-04-2016 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PANTHER PTHR21499 1 404 3.7E-164 T 22-04-2016 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 Gene3D G3DSA:3.40.1160.10 1 247 2.0E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 402 6.3E-135 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF00696 Amino acid kinase family 3 230 5.2E-48 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PIRSF PIRSF000726 56 406 2.2E-132 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 PANTHER PTHR21499:SF27 1 404 3.7E-164 T 22-04-2016 TMO_RS01905 a6cd7898b4470189e9a9d48598562f4e 406 Pfam PF01842 ACT domain 265 324 4.1E-14 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 PANTHER PTHR40202 1 187 2.6E-32 T 22-04-2016 TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 SUPERFAMILY SSF109604 26 70 2.03E-7 T 22-04-2016 TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 Pfam PF01966 HD domain 37 73 2.5E-5 T 22-04-2016 IPR006674 HD domain TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 PANTHER PTHR40202:SF1 1 187 2.6E-32 T 22-04-2016 TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 Gene3D G3DSA:1.10.3210.10 49 167 9.1E-5 T 22-04-2016 IPR006674 HD domain TMO_RS16245 491d7dfc2efb915bebf307617c08267a 191 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 14 186 2.9E-65 T 22-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.2090.10 749 836 1.0E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.70.1430 82 178 1.7E-20 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82866 332 530 2.88E-34 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Pfam PF00873 AcrB/AcrD/AcrF family 46 1051 1.3E-153 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PANTHER PTHR32063 42 1061 0.0 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82866 832 1055 3.4E-44 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82693 178 224 5.23E-17 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82693 310 365 5.23E-17 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:3.30.2090.10 226 309 1.4E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 504 527 7.3E-22 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 426 450 7.3E-22 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 80 98 7.3E-22 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 372 395 7.3E-22 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 7.3E-22 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 PANTHER PTHR32063:SF18 42 1061 0.0 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82714 227 308 6.02E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82693 82 176 5.23E-18 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 SUPERFAMILY SSF82714 751 835 2.35E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:1.10.3850.10 841 1054 3.5E-50 T 22-04-2016 TMO_RS06960 59bec1573106cf27bf95152c5f1bd1ac 1077 Gene3D G3DSA:1.10.3850.10 316 530 1.5E-44 T 22-04-2016 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 PIRSF PIRSF000857 1 233 1.5E-72 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 27 228 3.1E-54 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 Gene3D G3DSA:3.40.50.620 29 201 2.2E-41 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 SUPERFAMILY SSF52402 30 193 1.67E-40 T 22-04-2016 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 PANTHER PTHR23293 3 228 7.4E-69 T 22-04-2016 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 PANTHER PTHR23293:SF5 3 228 7.4E-69 T 22-04-2016 TMO_RS11750 bcfa826350ff31c73facebf10a8ed914 236 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 37 204 1.5E-35 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 TMO_RS12935 9028991ab0936b46def91790a61a79db 467 PANTHER PTHR23406:SF1 1 438 4.5E-12 T 22-04-2016 TMO_RS12935 9028991ab0936b46def91790a61a79db 467 PANTHER PTHR23406 1 438 4.5E-12 T 22-04-2016 TMO_RS12935 9028991ab0936b46def91790a61a79db 467 Gene3D G3DSA:3.10.129.10 9 138 4.3E-15 T 22-04-2016 IPR029069 HotDog domain TMO_RS12935 9028991ab0936b46def91790a61a79db 467 Gene3D G3DSA:3.40.50.10750 278 434 1.0E-48 T 22-04-2016 TMO_RS12935 9028991ab0936b46def91790a61a79db 467 Pfam PF01515 Phosphate acetyl/butaryl transferase 245 454 9.2E-43 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 TMO_RS12935 9028991ab0936b46def91790a61a79db 467 SUPERFAMILY SSF54637 9 136 1.32E-13 T 22-04-2016 IPR029069 HotDog domain TMO_RS12935 9028991ab0936b46def91790a61a79db 467 SUPERFAMILY SSF53659 171 461 3.87E-65 T 22-04-2016 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 SUPERFAMILY SSF47203 289 460 1.77E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 451 2.5E-17 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 PANTHER PTHR10909 1 477 2.2E-212 T 22-04-2016 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 489 597 2.8E-27 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 PANTHER PTHR10909:SF269 1 477 2.2E-212 T 22-04-2016 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 48 156 3.1E-8 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:2.40.110.10 160 273 2.8E-25 T 22-04-2016 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 269 2.4E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.1E-10 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:1.20.140.10 284 457 2.4E-45 T 22-04-2016 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 SUPERFAMILY SSF56645 37 281 1.57E-50 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS03200 24e5182ff83671bc99b9809e296bf288 603 Gene3D G3DSA:1.10.540.10 39 157 3.0E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 PANTHER PTHR10314:SF109 27 310 8.8E-58 T 22-04-2016 TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 8 310 1.2E-108 T 22-04-2016 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 Gene3D G3DSA:3.40.50.1100 36 138 1.0E-24 T 22-04-2016 TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 PANTHER PTHR10314 27 310 8.8E-58 T 22-04-2016 TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 Gene3D G3DSA:3.40.50.1100 139 308 2.6E-36 T 22-04-2016 TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 294 4.6E-50 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS11825 59495f985af4610e1a2f7c432f3cd270 327 SUPERFAMILY SSF53686 21 311 6.55E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.142 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.4E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 Pfam PF01649 Ribosomal protein S20 2 84 1.9E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 Gene3D G3DSA:1.20.58.110 1 86 2.3E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 26 89 2.0E-11 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 PANTHER PTHR33398 1 86 7.6E-26 T 22-04-2016 TMO_RS17950 aac75acc641f95ab56b256f47d415cc6 89 SUPERFAMILY SSF46992 3 86 5.36E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 PANTHER PTHR33164 1 149 4.9E-24 T 22-04-2016 TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 Gene3D G3DSA:1.10.10.10 4 137 3.9E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 Pfam PF01047 MarR family 33 89 4.1E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 SUPERFAMILY SSF46785 3 137 6.17E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00585 1228139d929e3b61cc948e176d4babc4 167 SMART SM00347 25 128 1.7E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 PANTHER PTHR33540 10 317 9.0E-34 T 22-04-2016 TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 Pfam PF01636 Phosphotransferase enzyme family 13 244 2.4E-25 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 SUPERFAMILY SSF56112 3 307 3.5E-43 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 PANTHER PTHR33540:SF1 10 317 9.0E-34 T 22-04-2016 TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 Gene3D G3DSA:3.30.200.20 1 80 1.6E-28 T 22-04-2016 TMO_RS16365 a4c0e8a113c9c95420d024d71c38a26e 338 Gene3D G3DSA:3.90.1200.10 81 314 7.5E-60 T 22-04-2016 TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 PANTHER PTHR20982 6 186 1.8E-74 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 12 186 2.0E-62 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 25.993 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 Pfam PF01765 Ribosome recycling factor 21 184 7.3E-59 T 22-04-2016 IPR023584 Ribosome recycling factor domain TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 Gene3D G3DSA:1.10.132.20 67 186 1.1E-42 T 22-04-2016 IPR023584 Ribosome recycling factor domain TMO_RS08940 f3f45fa813ceb9df966ed64afcf43a3c 186 SUPERFAMILY SSF55194 4 185 8.77E-68 T 22-04-2016 IPR023584 Ribosome recycling factor domain TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF00005 ABC transporter 26 174 3.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF12704 MacB-like periplasmic core domain 276 495 1.5E-29 T 22-04-2016 IPR025857 MacB-like periplasmic core domain TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 Gene3D G3DSA:3.40.50.300 7 227 4.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 PANTHER PTHR24220 9 237 1.1E-97 T 22-04-2016 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 PANTHER PTHR24220 416 572 1.1E-97 T 22-04-2016 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 Pfam PF02687 FtsX-like permease family 532 643 1.4E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 SMART SM00382 35 222 8.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 PANTHER PTHR24220:SF578 9 237 1.1E-97 T 22-04-2016 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 PANTHER PTHR24220:SF578 416 572 1.1E-97 T 22-04-2016 TMO_RS04805 c960238872383cc310bd5cfff97a7cc7 650 SUPERFAMILY SSF52540 9 228 3.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 223 344 1.2E-6 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 PIRSF PIRSF017085 1 397 1.4E-143 T 22-04-2016 IPR016683 Glycosyl transferase, family 28, RedA, predicted TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 PANTHER PTHR21015 5 343 3.4E-58 T 22-04-2016 TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 PANTHER PTHR21015:SF23 5 343 3.4E-58 T 22-04-2016 IPR016683 Glycosyl transferase, family 28, RedA, predicted TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 SUPERFAMILY SSF53756 146 362 3.85E-15 T 22-04-2016 TMO_RS10155 a0ed9213611c9e45131726e2ea39df7b 397 Gene3D G3DSA:3.40.50.2000 189 362 5.8E-20 T 22-04-2016 TMO_RS09300 3c66655392cb485499d75c4eb54678fd 730 Pfam PF03968 OstA-like protein 54 140 1.4E-5 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal TMO_RS09300 3c66655392cb485499d75c4eb54678fd 730 PANTHER PTHR30189 1 714 5.4E-33 T 22-04-2016 TMO_RS09300 3c66655392cb485499d75c4eb54678fd 730 Pfam PF04453 Organic solvent tolerance protein 299 663 2.4E-54 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 TMO_RS09300 3c66655392cb485499d75c4eb54678fd 730 Gene3D G3DSA:2.60.450.10 46 205 8.6E-21 T 22-04-2016 TMO_RS09300 3c66655392cb485499d75c4eb54678fd 730 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 24 728 16.243 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 316 1.4E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:1.20.120.430 130 190 4.7E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:1.20.120.430 390 461 4.7E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:1.20.120.430 255 279 4.7E-54 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 461 1.7E-84 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 10 461 30.792 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 11 128 1.7E-33 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 PANTHER PTHR11649 13 461 1.2E-158 T 22-04-2016 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF01926 50S ribosome-binding GTPase 227 320 1.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:3.30.1360.120 5 129 4.7E-38 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF116878 385 461 1.83E-45 T 22-04-2016 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF116878 129 228 1.83E-45 T 22-04-2016 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Gene3D G3DSA:3.40.50.300 225 254 5.4E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 PANTHER PTHR11649:SF56 13 461 1.2E-158 T 22-04-2016 TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF52540 212 377 6.11E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 SUPERFAMILY SSF52540 81 178 6.11E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17200 4e4525fcb3076985c8b58b9026ed50fb 461 Pfam PF12631 MnmE helical domain 131 458 1.1E-52 T 22-04-2016 IPR025867 MnmE, helical domain TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 650 1.7E-203 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:3.40.50.620 412 648 2.1E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:3.40.50.620 18 209 2.1E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 536 549 1.6E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.6E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 1.6E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 1.6E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 234 257 1.6E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:3.90.740.10 210 398 1.1E-53 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF52374 412 656 3.47E-134 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF52374 4 206 3.47E-134 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF47323 661 936 1.0E-60 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Pfam PF06827 Zinc finger found in FPG and IleRS 905 933 1.2E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PANTHER PTHR11946:SF11 288 857 0.0 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PANTHER PTHR11946:SF11 7 255 0.0 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Pfam PF08264 Anticodon-binding domain of tRNA 694 847 3.1E-19 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PANTHER PTHR11946 288 857 0.0 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 PANTHER PTHR11946 7 255 0.0 T 22-04-2016 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Gene3D G3DSA:1.10.730.10 650 836 1.1E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 SUPERFAMILY SSF50677 207 412 2.22E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 936 20.316 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 TMO_RS14570 678e6acace08963316b7b3304a52e7b9 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 850 1.9E-259 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 TMO_RS05835 33c7f504806dd96ecefc0d474a3e0b69 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_RS05835 33c7f504806dd96ecefc0d474a3e0b69 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 89 1.7E-6 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 45 204 2.1E-45 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 Hamap MF_00013 Octanoyltransferase [lipB]. 20 228 34.33 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 92 145 5.0E-16 T 22-04-2016 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 Gene3D G3DSA:3.90.1550.10 20 226 1.1E-66 T 22-04-2016 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 PIRSF PIRSF016262 20 236 1.5E-54 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 SUPERFAMILY SSF55681 23 228 5.97E-64 T 22-04-2016 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 181 5.7E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 PANTHER PTHR10993 17 226 1.2E-66 T 22-04-2016 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 88 103 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 TMO_RS13060 87da84d49782e4f0edb30f0829a430de 238 PANTHER PTHR10993:SF10 17 226 1.2E-66 T 22-04-2016 TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 SUPERFAMILY SSF51120 476 592 3.79E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 SUPERFAMILY SSF51120 385 415 3.79E-12 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 532 541 1.6E-6 T 22-04-2016 TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 493 504 1.6E-6 T 22-04-2016 TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 514 522 1.6E-6 T 22-04-2016 TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 PRINTS PR00313 NodO calcium binding signature 505 513 1.6E-6 T 22-04-2016 TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 Gene3D G3DSA:2.150.10.10 478 597 6.1E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS29105 cbecb6bd1930106acb91b62af196b732 673 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 576 644 4.3E-4 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 Pfam PF00696 Amino acid kinase family 10 218 1.1E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 6 239 45.245 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 SUPERFAMILY SSF53633 7 239 4.97E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 Gene3D G3DSA:3.40.1160.10 5 239 1.4E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 PIRSF PIRSF005650 4 242 5.8E-94 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 PANTHER PTHR21499 1 241 4.2E-110 T 22-04-2016 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 PANTHER PTHR21499:SF23 1 241 4.2E-110 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 TMO_RS08945 6b6d0e7429b18b03c123ae4997115c37 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 239 2.4E-100 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 TMO_RS29275 a38dbd3283a68eb3cfd84254ff23736c 286 Gene3D G3DSA:3.40.630.10 41 271 8.0E-7 T 22-04-2016 TMO_RS29275 a38dbd3283a68eb3cfd84254ff23736c 286 SUPERFAMILY SSF53187 30 270 3.22E-10 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 PANTHER PTHR10314:SF83 1 331 1.7E-154 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 Gene3D G3DSA:3.40.50.1100 157 324 4.5E-71 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 Gene3D G3DSA:3.40.50.1100 1 42 4.5E-71 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 306 1.6E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 Gene3D G3DSA:3.40.50.1100 43 137 5.5E-35 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 PANTHER PTHR10314 1 331 1.7E-154 T 22-04-2016 TMO_RS12610 6b26bb35cbee946b0d6ecc6e453f2662 334 SUPERFAMILY SSF53686 2 327 1.83E-95 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS01620 b7fe70abb9aaed4bd8d6bf0b9e2d0897 118 Pfam PF04380 Membrane fusogenic activity 2 78 6.5E-22 T 22-04-2016 IPR007475 Membrane fusogenic activity TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 Pfam PF01270 Glycosyl hydrolases family 8 103 427 1.9E-71 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 Gene3D G3DSA:1.50.10.10 94 429 3.6E-74 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 SUPERFAMILY SSF48208 101 431 7.49E-81 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 413 427 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 254 271 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 323 332 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 296 307 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 190 208 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS05450 34b24a3cac0650e60336f6a5db829266 434 PRINTS PR00735 Glycosyl hydrolase family 8 signature 132 145 2.2E-23 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 Gene3D G3DSA:3.40.50.300 2 241 2.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 PANTHER PTHR24220:SF123 3 333 9.4E-136 T 22-04-2016 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 Pfam PF12857 TOBE-like domain 293 348 3.4E-11 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 SMART SM00382 26 213 8.9E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 Gene3D G3DSA:2.40.50.100 297 349 1.6E-5 T 22-04-2016 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 2 242 2.2E-116 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 Pfam PF00005 ABC transporter 19 163 1.9E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 SUPERFAMILY SSF50331 239 352 6.8E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 SUPERFAMILY SSF52540 1 244 3.25E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01275 6152eb34b85c57e144334daae5c8f289 371 PANTHER PTHR24220 3 333 9.4E-136 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 158 189 2.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 269 3.6E-9 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 155 3.7E-9 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 14 337 34.222 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Gene3D G3DSA:2.160.10.10 112 162 1.5E-16 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 PANTHER PTHR22572 215 325 4.6E-43 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 PANTHER PTHR22572 124 193 4.6E-43 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Gene3D G3DSA:2.160.10.10 223 330 2.1E-24 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 SUPERFAMILY SSF51161 44 327 5.37E-75 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 PANTHER PTHR22572:SF7 215 325 4.6E-43 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 PANTHER PTHR22572:SF7 124 193 4.6E-43 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 36 99 7.6E-19 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 Gene3D G3DSA:2.160.10.10 163 222 2.9E-12 T 22-04-2016 TMO_RS08905 1d2040cfb096eb6ce342dcd6376c72ab 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 17 340 2.1E-103 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 TMO_RS00870 9a78e541918953545353372b12e98003 290 Gene3D G3DSA:3.10.310.10 4 133 1.1E-35 T 22-04-2016 TMO_RS00870 9a78e541918953545353372b12e98003 290 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 286 35.091 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 SUPERFAMILY SSF54506 4 143 6.63E-35 T 22-04-2016 TMO_RS00870 9a78e541918953545353372b12e98003 290 Pfam PF01678 Diaminopimelate epimerase 6 135 2.1E-20 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 Pfam PF01678 Diaminopimelate epimerase 165 276 1.7E-28 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 284 2.6E-76 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 Gene3D G3DSA:3.10.310.10 134 274 3.5E-50 T 22-04-2016 TMO_RS00870 9a78e541918953545353372b12e98003 290 PANTHER PTHR31689 1 290 5.3E-107 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 75 89 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 TMO_RS00870 9a78e541918953545353372b12e98003 290 SUPERFAMILY SSF54506 160 284 1.01E-48 T 22-04-2016 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 PANTHER PTHR10849:SF20 4 162 2.0E-109 T 22-04-2016 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 Pfam PF12838 4Fe-4S dicluster domain 62 116 4.2E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 Gene3D G3DSA:1.10.1060.10 15 137 1.5E-23 T 22-04-2016 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 146 28.998 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 SUPERFAMILY SSF54862 36 146 2.18E-27 T 22-04-2016 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 1.2E-51 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS09905 0468028dd59d9005d96a6fa99d73490d 162 PANTHER PTHR10849 4 162 2.0E-109 T 22-04-2016 TMO_RS29430 5ace57075806c4bb6569bee3aaa92b57 484 Pfam PF10983 Protein of unknown function (DUF2793) 24 109 6.5E-31 T 22-04-2016 IPR021251 Protein of unknown function DUF2793 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 SUPERFAMILY SSF51182 80 203 8.02E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 PANTHER PTHR10245:SF9 1 203 7.3E-41 T 22-04-2016 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 Gene3D G3DSA:1.10.260.40 29 126 4.4E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 SMART SM00530 32 87 2.2E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 SUPERFAMILY SSF47413 27 92 1.56E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 PANTHER PTHR10245 1 203 7.3E-41 T 22-04-2016 TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 Gene3D G3DSA:2.60.120.10 127 203 1.6E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 Pfam PF07883 Cupin domain 133 202 3.3E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS16095 e8dfbc1276e9a5bef32e0649e36f21ef 214 Pfam PF01381 Helix-turn-helix 33 85 5.7E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 Gene3D G3DSA:3.40.50.300 3 201 4.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 PANTHER PTHR24220 4 194 9.1E-57 T 22-04-2016 TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 SUPERFAMILY SSF52540 4 210 2.05E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 Pfam PF00005 ABC transporter 21 163 3.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 SMART SM00382 27 212 5.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16800 ffbf1175cd0649c555a1b722667a6483 216 PANTHER PTHR24220:SF485 4 194 9.1E-57 T 22-04-2016 TMO_RS07410 b7c68a4d7637acbac62012329529c1d5 177 PANTHER PTHR40394 19 175 3.1E-36 T 22-04-2016 TMO_RS07410 b7c68a4d7637acbac62012329529c1d5 177 PANTHER PTHR40394:SF2 19 175 3.1E-36 T 22-04-2016 TMO_RS07410 b7c68a4d7637acbac62012329529c1d5 177 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 71 150 2.1E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS07410 b7c68a4d7637acbac62012329529c1d5 177 SUPERFAMILY SSF46626 62 154 5.59E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS07410 b7c68a4d7637acbac62012329529c1d5 177 Gene3D G3DSA:1.10.760.10 59 155 5.2E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 SUPERFAMILY SSF55811 243 380 1.2E-14 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:3.90.79.10 254 379 1.5E-14 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:1.10.1670.10 149 245 3.9E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 ProSitePatterns PS01155 Endonuclease III family signature. 127 156 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 61 179 2.9E-16 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF00633 Helix-hairpin-helix motif 125 152 3.3E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 SMART SM00478 64 213 2.1E-47 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 215 231 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Pfam PF14815 NUDIX domain 259 378 8.1E-18 T 22-04-2016 IPR029119 MutY, C-terminal TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 Gene3D G3DSA:1.10.340.30 51 148 8.2E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 PANTHER PTHR10359 27 334 3.3E-82 T 22-04-2016 TMO_RS13860 3aa8ea32e34b09d6f103e87a0bd340de 391 SUPERFAMILY SSF48150 27 244 3.14E-68 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 Gene3D G3DSA:3.90.180.10 2 146 4.8E-47 T 22-04-2016 IPR011032 GroES-like TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 SUPERFAMILY SSF50129 2 144 2.13E-39 T 22-04-2016 IPR011032 GroES-like TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 PANTHER PTHR11695 16 324 1.3E-151 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 PANTHER PTHR11695:SF578 16 324 1.3E-151 T 22-04-2016 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 SUPERFAMILY SSF51735 112 269 7.06E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 Gene3D G3DSA:3.40.50.720 147 251 5.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 Pfam PF00107 Zinc-binding dehydrogenase 151 254 6.4E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 SMART SM00829 11 322 2.6E-45 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS17170 363d1cfbc5d36574bdabceebd9e8cb8b 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 88 6.5E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PANTHER PTHR24423 152 479 1.9E-53 T 22-04-2016 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 SUPERFAMILY SSF47384 249 322 4.71E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 Gene3D G3DSA:3.30.565.10 332 480 3.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 322 9.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 SMART SM00387 369 482 6.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 SMART SM00388 266 324 1.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 Gene3D G3DSA:1.10.287.130 258 319 9.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 480 6.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 SUPERFAMILY SSF55874 330 479 4.32E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 PANTHER PTHR24423:SF399 152 479 1.9E-53 T 22-04-2016 TMO_RS13525 73aa11b150a183f2d0d04edcc24d35d3 484 Pfam PF08521 Two-component sensor kinase N-terminal 27 177 9.3E-5 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 Pfam PF03466 LysR substrate binding domain 90 294 2.7E-39 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 Gene3D G3DSA:1.10.10.10 6 90 5.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 Gene3D G3DSA:3.40.190.10 94 195 2.2E-22 T 22-04-2016 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 PANTHER PTHR30537:SF1 1 294 4.2E-131 T 22-04-2016 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 SUPERFAMILY SSF46785 6 90 7.33E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 PANTHER PTHR30537 1 294 4.2E-131 T 22-04-2016 TMO_RS05260 5930d4a4a8cd706ba95fcac7851ce046 295 SUPERFAMILY SSF53850 92 294 1.5E-41 T 22-04-2016 TMO_RS14875 b11ff2368fff5b15e467ba88aeda3678 285 SUPERFAMILY SSF161098 87 271 3.01E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14875 b11ff2368fff5b15e467ba88aeda3678 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 1.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14875 b11ff2368fff5b15e467ba88aeda3678 285 PANTHER PTHR30177:SF10 6 283 4.5E-122 T 22-04-2016 TMO_RS14875 b11ff2368fff5b15e467ba88aeda3678 285 Gene3D G3DSA:1.10.3720.10 87 272 1.3E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14875 b11ff2368fff5b15e467ba88aeda3678 285 PANTHER PTHR30177 6 283 4.5E-122 T 22-04-2016 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 Gene3D G3DSA:3.20.20.60 67 212 2.5E-47 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 PANTHER PTHR22931:SF15 1 212 1.2E-102 T 22-04-2016 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 SUPERFAMILY SSF51621 65 212 2.43E-48 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 Gene3D G3DSA:3.50.30.10 1 65 2.8E-12 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 PANTHER PTHR22931 1 212 1.2E-102 T 22-04-2016 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 Pfam PF00391 PEP-utilising enzyme, mobile domain 1 37 3.0E-6 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 64 212 4.4E-51 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 TMO_RS25905 c3a5109d3f04179ca480081c96b5188c 212 SUPERFAMILY SSF52009 1 57 1.7E-11 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 216 24.364 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 PANTHER PTHR10204:SF16 1 216 1.5E-49 T 22-04-2016 TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 Gene3D G3DSA:3.40.50.360 1 218 4.6E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 PANTHER PTHR10204 1 216 1.5E-49 T 22-04-2016 TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 Pfam PF02525 Flavodoxin-like fold 4 214 4.5E-35 T 22-04-2016 IPR003680 Flavodoxin-like fold TMO_RS02020 d5d1489730381348a8c2195afc12d494 226 SUPERFAMILY SSF52218 1 218 1.84E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 SUPERFAMILY SSF81442 19 524 3.66E-157 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 Gene3D G3DSA:1.20.210.10 17 527 1.8E-169 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 471 1.2E-128 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PANTHER PTHR10422 7 525 2.5E-242 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PANTHER PTHR10422:SF6 7 525 2.5E-242 T 22-04-2016 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 317 338 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 120 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 380 399 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 451 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 137 149 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 247 268 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 352 370 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 196 215 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 293 308 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 167 185 5.0E-99 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS07440 9f794dd3f3c118e03401998f677d040d 541 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 249 303 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 9.8E-22 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 Pfam PF02599 Global regulator protein family 1 52 1.9E-21 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 PANTHER PTHR34984:SF1 1 58 9.8E-21 T 22-04-2016 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 SUPERFAMILY SSF117130 1 55 3.14E-16 T 22-04-2016 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 PANTHER PTHR34984 1 58 9.8E-21 T 22-04-2016 TMO_RS05640 4d69a9748c2d0591d59e557a6991c91c 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 5.0E-9 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 TMO_RS09895 54e9a9dbcea08e3960d77cc206f6ef60 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 3 102 20.427 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TMO_RS09895 54e9a9dbcea08e3960d77cc206f6ef60 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 97 1.3E-25 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TMO_RS09895 54e9a9dbcea08e3960d77cc206f6ef60 102 PANTHER PTHR11434 5 102 4.5E-44 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 PANTHER PTHR11019:SF138 1 250 2.6E-79 T 22-04-2016 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 SUPERFAMILY SSF51182 21 179 2.47E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 PANTHER PTHR11019 1 250 2.6E-79 T 22-04-2016 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 Gene3D G3DSA:1.10.10.60 213 250 1.3E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 SMART SM00342 170 252 2.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 Gene3D G3DSA:2.60.120.10 21 86 1.8E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 Pfam PF02311 AraC-like ligand binding domain 30 111 1.3E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 Pfam PF12833 Helix-turn-helix domain 176 251 2.8E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS07340 f97482691ddd692a4e0eade2a46c72fa 255 Gene3D G3DSA:1.10.10.60 151 205 2.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16275 f22dd7c9fbfe36b7d700bc35a06ac562 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 297 1.3E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16275 f22dd7c9fbfe36b7d700bc35a06ac562 301 PANTHER PTHR32243:SF13 10 301 1.0E-86 T 22-04-2016 TMO_RS16275 f22dd7c9fbfe36b7d700bc35a06ac562 301 PANTHER PTHR32243 10 301 1.0E-86 T 22-04-2016 TMO_RS16275 f22dd7c9fbfe36b7d700bc35a06ac562 301 SUPERFAMILY SSF161098 60 287 2.09E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16275 f22dd7c9fbfe36b7d700bc35a06ac562 301 Gene3D G3DSA:1.10.3720.10 66 295 1.9E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS00325 14039cc715bf72f6053263cb94359456 76 Gene3D G3DSA:1.10.260.40 3 54 1.7E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS00325 14039cc715bf72f6053263cb94359456 76 Pfam PF13560 Helix-turn-helix domain 5 57 1.1E-11 T 22-04-2016 TMO_RS00325 14039cc715bf72f6053263cb94359456 76 SUPERFAMILY SSF47413 3 51 1.1E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS00325 14039cc715bf72f6053263cb94359456 76 SMART SM00530 2 57 1.1E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS09700 49334f994ebff0be8fbf59af2dced717 165 SUPERFAMILY SSF53335 2 156 2.07E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09700 49334f994ebff0be8fbf59af2dced717 165 PANTHER PTHR11727:SF14 1 99 8.2E-12 T 22-04-2016 TMO_RS09700 49334f994ebff0be8fbf59af2dced717 165 Gene3D G3DSA:3.40.50.150 1 68 1.4E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09700 49334f994ebff0be8fbf59af2dced717 165 PANTHER PTHR11727 1 99 8.2E-12 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TMO_RS07185 6710ea6116cfac2517495296c17d6d65 168 Pfam PF08882 Acetone carboxylase gamma subunit 47 158 6.5E-53 T 22-04-2016 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit TMO_RS07185 6710ea6116cfac2517495296c17d6d65 168 PIRSF PIRSF019217 1 167 9.6E-75 T 22-04-2016 IPR016750 Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 303 317 5.7E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 407 415 5.7E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 PRINTS PR00409 Phthalate dioxygenase reductase family signature 325 344 5.7E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 PANTHER PTHR11972:SF23 31 441 3.0E-56 T 22-04-2016 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 PANTHER PTHR11972 31 441 3.0E-56 T 22-04-2016 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 Gene3D G3DSA:2.40.30.10 233 307 4.1E-13 T 22-04-2016 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 Pfam PF08022 FAD-binding domain 251 313 2.6E-6 T 22-04-2016 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 Gene3D G3DSA:3.40.50.80 308 435 1.7E-18 T 22-04-2016 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 Pfam PF01794 Ferric reductase like transmembrane component 43 177 9.0E-16 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 SUPERFAMILY SSF63380 234 315 3.97E-17 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS14825 a5214f3f402605fe5478aa1bb80a81a8 442 SUPERFAMILY SSF52343 320 439 2.49E-21 T 22-04-2016 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 Gene3D G3DSA:3.40.140.10 1 141 1.9E-49 T 22-04-2016 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 Pfam PF14437 MafB19-like deaminase 1 144 1.6E-26 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 48 85 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 SUPERFAMILY SSF53927 1 142 3.51E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 PANTHER PTHR11079 1 142 3.8E-36 T 22-04-2016 TMO_RS14500 f9a96c08f142e0aad8dbc1b282da88ab 144 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 144 45.036 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 TMO_RS12760 e983851587e5526b157453065fc13311 351 PANTHER PTHR24220 20 256 4.4E-128 T 22-04-2016 TMO_RS12760 e983851587e5526b157453065fc13311 351 Pfam PF08402 TOBE domain 271 345 2.9E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS12760 e983851587e5526b157453065fc13311 351 SMART SM00382 43 226 2.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS12760 e983851587e5526b157453065fc13311 351 SUPERFAMILY SSF52540 19 255 9.74E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12760 e983851587e5526b157453065fc13311 351 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS12760 e983851587e5526b157453065fc13311 351 PANTHER PTHR24220:SF150 20 256 4.4E-128 T 22-04-2016 TMO_RS12760 e983851587e5526b157453065fc13311 351 Pfam PF00005 ABC transporter 35 176 2.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12760 e983851587e5526b157453065fc13311 351 Gene3D G3DSA:3.40.50.300 17 254 1.2E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12760 e983851587e5526b157453065fc13311 351 SUPERFAMILY SSF50331 250 345 1.08E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 PANTHER PTHR32332:SF12 114 192 4.6E-47 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 PANTHER PTHR32332:SF12 6 87 4.6E-47 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 SUPERFAMILY SSF51412 118 197 7.48E-25 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 SUPERFAMILY SSF51412 8 81 7.48E-25 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 PANTHER PTHR32332 114 192 4.6E-47 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 PANTHER PTHR32332 6 87 4.6E-47 T 22-04-2016 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 Gene3D G3DSA:3.20.20.70 7 199 1.2E-28 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS29625 0fd261607d8306662d3be8ce59ce7ca7 217 Pfam PF03060 Nitronate monooxygenase 20 192 2.7E-30 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 PANTHER PTHR23502 4 381 7.2E-123 T 22-04-2016 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 SUPERFAMILY SSF103473 3 392 3.53E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 PANTHER PTHR23502:SF19 4 381 7.2E-123 T 22-04-2016 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 Gene3D G3DSA:1.20.1250.20 6 188 1.4E-30 T 22-04-2016 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 Gene3D G3DSA:1.20.1250.20 205 392 2.1E-5 T 22-04-2016 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 385 3.0E-96 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS12865 c5ba82be0e13e84d10f7fa36a52edcfb 399 Pfam PF07690 Major Facilitator Superfamily 10 356 4.4E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS02550 f06be6ab8f327090d2d2e67fa054880e 297 PANTHER PTHR11795:SF349 1 297 1.7E-93 T 22-04-2016 TMO_RS02550 f06be6ab8f327090d2d2e67fa054880e 297 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 3 297 4.9E-103 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type TMO_RS02550 f06be6ab8f327090d2d2e67fa054880e 297 PANTHER PTHR11795 1 297 1.7E-93 T 22-04-2016 TMO_RS02550 f06be6ab8f327090d2d2e67fa054880e 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 284 2.7E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS13490 6bbd1c4ea09b39bf6ade617e3de8ab16 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 7.5E-28 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 TMO_RS13490 6bbd1c4ea09b39bf6ade617e3de8ab16 152 PANTHER PTHR30558 7 142 2.3E-71 T 22-04-2016 TMO_RS13490 6bbd1c4ea09b39bf6ade617e3de8ab16 152 PANTHER PTHR30558:SF9 7 142 2.3E-71 T 22-04-2016 TMO_RS13490 6bbd1c4ea09b39bf6ade617e3de8ab16 152 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 135 4.8E-61 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 TMO_RS12255 1c10d84dede12e046aff0be3f99ee9c5 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 7 132 3.0E-18 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 PANTHER PTHR36512 221 369 3.6E-87 T 22-04-2016 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 PANTHER PTHR36512 6 201 3.6E-87 T 22-04-2016 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 Gene3D G3DSA:3.60.70.12 2 214 1.4E-81 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 Gene3D G3DSA:3.60.70.12 253 365 1.4E-81 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 PANTHER PTHR36512:SF3 221 369 3.6E-87 T 22-04-2016 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 PANTHER PTHR36512:SF3 6 201 3.6E-87 T 22-04-2016 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 Pfam PF03576 Peptidase family S58 10 359 3.3E-67 T 22-04-2016 IPR005321 Peptidase S58, DmpA TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 SUPERFAMILY SSF56266 272 366 2.62E-62 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS01530 9104ea0fed1c1f8b32cb708cfe8b886f 379 SUPERFAMILY SSF56266 3 222 2.62E-62 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 SUPERFAMILY SSF54665 5 163 9.55E-44 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 157 228 5.5E-10 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 Gene3D G3DSA:3.30.365.10 130 203 2.8E-17 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 21 141 1.0E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 PANTHER PTHR11908:SF76 7 230 1.4E-64 T 22-04-2016 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 PANTHER PTHR11908 7 230 1.4E-64 T 22-04-2016 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 SUPERFAMILY SSF56003 133 229 6.67E-19 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 Gene3D G3DSA:3.90.1170.50 7 129 4.6E-40 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS26905 81384f10922835bf2a021c89efd5446d 230 SMART SM01008 21 141 1.5E-46 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Pfam PF02615 Malate/L-lactate dehydrogenase 5 336 7.8E-107 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Gene3D G3DSA:3.30.1370.60 73 276 1.6E-70 T 22-04-2016 TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 PANTHER PTHR11091 1 354 1.9E-101 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 Gene3D G3DSA:1.10.1530.10 3 72 6.5E-19 T 22-04-2016 TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 SUPERFAMILY SSF89733 2 340 2.75E-95 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS03365 4bdb5740ca32bb8a7ebf1c30a0924a75 359 PANTHER PTHR11091:SF2 1 354 1.9E-101 T 22-04-2016 TMO_RS15275 4644e9945556dd347630a192d554b394 288 SUPERFAMILY SSF46785 28 97 8.5E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15275 4644e9945556dd347630a192d554b394 288 Gene3D G3DSA:1.10.10.10 26 94 2.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08300 9221f7fb29c41ad4665b01b13d0fa551 106 Pfam PF12966 N-ATPase, AtpR subunit 13 92 1.3E-11 T 22-04-2016 IPR017581 N-ATPase, AtpR subunit-like TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 9 338 38.546 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 1.6E-39 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 Pfam PF04055 Radical SAM superfamily 23 184 6.4E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 9 338 2.8E-107 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 Gene3D G3DSA:3.20.20.70 9 298 3.5E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 PANTHER PTHR22960 9 288 2.9E-106 T 22-04-2016 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 SMART SM00729 18 219 1.1E-9 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 SUPERFAMILY SSF102114 9 282 5.76E-77 T 22-04-2016 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 24 35 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS06135 66d5e4d1c2fbfcbe6a8477f2cb8eaf28 338 Pfam PF13353 4Fe-4S single cluster domain 25 131 8.0E-7 T 22-04-2016 TMO_RS16490 ebd678d17b0bd8916fa93ce50633b69a 288 PANTHER PTHR10534 3 286 2.7E-76 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS16490 ebd678d17b0bd8916fa93ce50633b69a 288 Pfam PF08543 Phosphomethylpyrimidine kinase 79 262 2.2E-20 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 TMO_RS16490 ebd678d17b0bd8916fa93ce50633b69a 288 Gene3D G3DSA:3.40.1190.20 2 276 5.5E-73 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS16490 ebd678d17b0bd8916fa93ce50633b69a 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 2 276 3.2E-68 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS16490 ebd678d17b0bd8916fa93ce50633b69a 288 SUPERFAMILY SSF53613 3 273 2.81E-59 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS03690 6238fbbca1d108633e5806ff12c97856 218 Pfam PF03551 Transcriptional regulator PadR-like family 79 148 9.5E-17 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal TMO_RS03690 6238fbbca1d108633e5806ff12c97856 218 PANTHER PTHR33169:SF2 61 184 8.3E-28 T 22-04-2016 TMO_RS03690 6238fbbca1d108633e5806ff12c97856 218 Gene3D G3DSA:1.10.10.10 66 169 1.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03690 6238fbbca1d108633e5806ff12c97856 218 SUPERFAMILY SSF46785 75 184 4.03E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03690 6238fbbca1d108633e5806ff12c97856 218 PANTHER PTHR33169 61 184 8.3E-28 T 22-04-2016 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 PANTHER PTHR32552 153 751 2.1E-12 T 22-04-2016 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 Gene3D G3DSA:2.170.130.10 152 260 9.4E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 Gene3D G3DSA:2.40.170.20 261 751 7.9E-46 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 247 1.4E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 SUPERFAMILY SSF56935 151 751 1.05E-65 T 22-04-2016 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 Pfam PF00593 TonB dependent receptor 509 749 2.7E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS13035 5d816e0f5849fee61da86e2cdbd57559 751 SMART SM00965 67 117 1.2E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 PANTHER PTHR30204 17 92 1.8E-18 T 22-04-2016 TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 SMART SM00422 24 93 5.8E-4 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 PANTHER PTHR30204:SF15 17 92 1.8E-18 T 22-04-2016 TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 SUPERFAMILY SSF46955 24 93 2.43E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 Gene3D G3DSA:1.10.1660.10 24 104 7.3E-14 T 22-04-2016 TMO_RS29290 958d72e797c4939e81aaa1fc40edcf36 290 Pfam PF13411 MerR HTH family regulatory protein 24 92 3.3E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 PANTHER PTHR12418:SF25 24 171 1.7E-50 T 22-04-2016 TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 74 165 2.3E-24 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 Gene3D G3DSA:3.10.129.10 29 166 2.0E-51 T 22-04-2016 IPR029069 HotDog domain TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 SUPERFAMILY SSF54637 25 163 3.82E-37 T 22-04-2016 IPR029069 HotDog domain TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 Pfam PF03061 Thioesterase superfamily 79 156 4.0E-17 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS01230 3255ce86b0a9ddaba69479d33da0db92 173 PANTHER PTHR12418 24 171 1.7E-50 T 22-04-2016 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.30.310.50 373 445 5.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 PANTHER PTHR22573 3 447 8.6E-155 T 22-04-2016 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 442 5.6E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 158 257 7.06E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 2.9E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 3 151 8.2E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 178 252 6.4E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 PANTHER PTHR22573:SF15 3 447 8.6E-155 T 22-04-2016 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF55957 362 446 2.22E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Gene3D G3DSA:3.40.120.10 253 369 6.8E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 446 45.988 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 6.5E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 6.5E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 6.5E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 444 9.1E-185 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 2 183 1.65E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 SUPERFAMILY SSF53738 260 366 7.85E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 5.6E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS04595 1c3e4253c891a73a01bc7aafa2152b20 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 365 1.1E-34 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS01880 f2cbfa561cc168ed97f1c9300f7b8a3e 335 PIRSF PIRSF017082 1 335 5.8E-70 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 TMO_RS01880 f2cbfa561cc168ed97f1c9300f7b8a3e 335 PANTHER PTHR30349:SF29 34 297 4.4E-110 T 22-04-2016 TMO_RS01880 f2cbfa561cc168ed97f1c9300f7b8a3e 335 PANTHER PTHR30349 34 297 4.4E-110 T 22-04-2016 TMO_RS01880 f2cbfa561cc168ed97f1c9300f7b8a3e 335 SUPERFAMILY SSF53850 106 242 6.52E-6 T 22-04-2016 TMO_RS01880 f2cbfa561cc168ed97f1c9300f7b8a3e 335 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 333 1.1E-18 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 3.1E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 SMART SM00895 99 227 2.4E-16 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 SUPERFAMILY SSF46785 15 76 1.77E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 PANTHER PTHR11751:SF355 18 115 1.4E-18 T 22-04-2016 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 SUPERFAMILY SSF48008 97 232 3.4E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 Pfam PF07729 FCD domain 100 226 1.4E-20 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 PANTHER PTHR11751 18 115 1.4E-18 T 22-04-2016 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 Gene3D G3DSA:1.20.120.530 97 234 5.0E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 SMART SM00345 17 76 3.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02365 50006332fdc3a8dd1867a964b7084843 258 Gene3D G3DSA:1.10.10.10 15 73 3.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03275 0d92b1523f87e053c3f46bf925205800 643 Pfam PF05787 Bacterial protein of unknown function (DUF839) 195 603 2.8E-18 T 22-04-2016 IPR008557 Protein of unknown function DUF839 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 PANTHER PTHR33569:SF1 2 100 1.5E-44 T 22-04-2016 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 PANTHER PTHR33569 2 100 1.5E-44 T 22-04-2016 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 Gene3D G3DSA:3.30.280.10 1 100 7.8E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 6.6E-48 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 SUPERFAMILY SSF54111 1 100 1.2E-45 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 PIRSF PIRSF001223 1 100 6.8E-51 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 Pfam PF00547 Urease, gamma subunit 1 99 1.4E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 7.0E-37 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS08685 cdcba287e25f1b2e1008e23a45b18b2a 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.491 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 SUPERFAMILY SSF52374 17 176 6.57E-26 T 22-04-2016 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 Gene3D G3DSA:3.40.50.620 3 179 1.5E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 PANTHER PTHR22749 1 324 1.3E-110 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 Gene3D G3DSA:2.40.30.30 180 320 1.8E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 Pfam PF01687 Riboflavin kinase 184 316 6.2E-37 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 SMART SM00904 183 317 9.1E-61 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 SUPERFAMILY SSF82114 174 318 1.2E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 316 1.7E-79 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 Pfam PF06574 FAD synthetase 14 167 3.5E-47 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 PIRSF PIRSF004491 1 323 6.6E-96 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 TMO_RS14575 b805b44b2d024e53620d7f625815b047 325 PANTHER PTHR22749:SF0 1 324 1.3E-110 T 22-04-2016 TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 Pfam PF07690 Major Facilitator Superfamily 23 362 2.7E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 SUPERFAMILY SSF103473 8 395 2.62E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 PANTHER PTHR11360:SF115 9 395 2.5E-94 T 22-04-2016 TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 PANTHER PTHR11360 9 395 2.5E-94 T 22-04-2016 TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 Gene3D G3DSA:1.20.1250.20 17 195 3.2E-20 T 22-04-2016 TMO_RS06210 b538ace15cf74ac2abc01e6db7bd0d4b 417 Gene3D G3DSA:1.20.1250.20 217 393 2.1E-16 T 22-04-2016 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PANTHER PTHR22573 11 466 8.5E-146 T 22-04-2016 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 372 1.5E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.4E-20 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 1.4E-20 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 1.4E-20 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 210 223 1.4E-20 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF55957 373 457 3.31E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 8 133 2.51E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 PANTHER PTHR22573:SF28 11 466 8.5E-146 T 22-04-2016 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 256 373 5.9E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 263 370 8.63E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 13 130 1.7E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.40.120.10 179 255 2.3E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 SUPERFAMILY SSF53738 158 261 2.59E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 455 2.1E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Gene3D G3DSA:3.30.310.50 376 458 4.0E-23 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 138 1.0E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS02950 62272107a4fa24287b845c6ee6870d4c 469 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 259 4.7E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 PANTHER PTHR30465 1 276 5.5E-106 T 22-04-2016 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 275 3.4E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 PANTHER PTHR30465:SF2 1 276 5.5E-106 T 22-04-2016 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 Gene3D G3DSA:1.10.3720.10 68 272 1.2E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 SUPERFAMILY SSF161098 70 259 5.36E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01395 c67610f14bb1703be63a77542119788f 279 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 50 2.6E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS16475 c4b4218f7c279f4d95604334a7468931 112 Gene3D G3DSA:2.60.120.10 32 99 7.3E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS16475 c4b4218f7c279f4d95604334a7468931 112 SUPERFAMILY SSF51182 29 99 1.09E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS16475 c4b4218f7c279f4d95604334a7468931 112 Pfam PF07883 Cupin domain 32 90 1.3E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 SUPERFAMILY SSF46458 8 149 2.16E-38 T 22-04-2016 IPR009050 Globin-like TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Pfam PF00175 Oxidoreductase NAD-binding domain 279 386 1.4E-9 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 SUPERFAMILY SSF52343 270 407 3.67E-34 T 22-04-2016 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Pfam PF00970 Oxidoreductase FAD-binding domain 172 267 1.9E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 PRINTS PR00409 Phthalate dioxygenase reductase family signature 241 255 4.6E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 PRINTS PR00409 Phthalate dioxygenase reductase family signature 278 297 4.6E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 203 4.6E-8 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Gene3D G3DSA:3.40.50.80 272 407 1.6E-29 T 22-04-2016 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Pfam PF00042 Globin 22 116 8.9E-8 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Gene3D G3DSA:1.10.490.10 17 154 2.2E-46 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 Gene3D G3DSA:2.40.30.10 165 269 4.1E-30 T 22-04-2016 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 PANTHER PTHR22924 16 414 1.3E-107 T 22-04-2016 TMO_RS10150 462059d392a1cd4b51191c1005b44341 416 SUPERFAMILY SSF63380 164 268 5.55E-27 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 Gene3D G3DSA:3.90.550.10 28 258 7.6E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 Pfam PF00535 Glycosyl transferase family 2 28 203 3.8E-11 T 22-04-2016 IPR001173 Glycosyltransferase 2-like TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 PANTHER PTHR22916 200 270 4.0E-17 T 22-04-2016 TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 PANTHER PTHR22916 27 181 4.0E-17 T 22-04-2016 TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 PANTHER PTHR22916:SF22 200 270 4.0E-17 T 22-04-2016 TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 PANTHER PTHR22916:SF22 27 181 4.0E-17 T 22-04-2016 TMO_RS15365 6497451dc6a2402c558116eaf0312801 390 SUPERFAMILY SSF53448 27 267 3.28E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS07400 acd19879bc5434e0bae2bb7be43bd7a3 449 Pfam PF03916 Polysulphide reductase, NrfD 63 386 3.4E-29 T 22-04-2016 IPR005614 NrfD family TMO_RS07400 acd19879bc5434e0bae2bb7be43bd7a3 449 PANTHER PTHR34856 22 448 3.9E-160 T 22-04-2016 TMO_RS07400 acd19879bc5434e0bae2bb7be43bd7a3 449 PANTHER PTHR34856:SF1 22 448 3.9E-160 T 22-04-2016 TMO_RS09755 37533d1e3346f9d90ac2d5fdebad2f95 258 Gene3D G3DSA:3.40.50.300 3 238 1.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09755 37533d1e3346f9d90ac2d5fdebad2f95 258 SUPERFAMILY SSF52540 9 224 5.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09755 37533d1e3346f9d90ac2d5fdebad2f95 258 PANTHER PTHR24220 5 239 5.6E-75 T 22-04-2016 TMO_RS09755 37533d1e3346f9d90ac2d5fdebad2f95 258 Pfam PF00005 ABC transporter 19 168 4.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09755 37533d1e3346f9d90ac2d5fdebad2f95 258 SMART SM00382 28 216 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 Pfam PF03466 LysR substrate binding domain 92 289 9.5E-23 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 SUPERFAMILY SSF53850 93 291 5.61E-24 T 22-04-2016 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 PANTHER PTHR30537:SF26 1 306 2.1E-74 T 22-04-2016 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:1.10.10.10 3 85 8.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 SUPERFAMILY SSF46785 5 83 3.91E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 2.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 PANTHER PTHR30537 1 306 2.1E-74 T 22-04-2016 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:3.40.190.10 178 255 1.7E-17 T 22-04-2016 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 Gene3D G3DSA:3.40.190.10 96 177 4.1E-16 T 22-04-2016 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02335 f4d536b97a536a696fecbd10a479e540 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF47917 383 507 1.33E-23 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:1.20.150.20 384 507 7.6E-24 T 22-04-2016 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 374 1.3E-62 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 PANTHER PTHR15184 23 495 7.2E-189 T 22-04-2016 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF50615 26 104 1.18E-14 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 37 102 3.0E-5 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 PANTHER PTHR15184:SF3 23 495 7.2E-189 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 32 507 7.3E-166 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 SUPERFAMILY SSF52540 106 379 2.53E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 511 38.171 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:3.40.50.300 105 380 1.1E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 381 505 4.4E-24 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 365 374 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS08320 e1cc45393dd143f78abe9953b5de644c 520 Gene3D G3DSA:2.40.30.20 36 103 8.0E-16 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS07100 9eb212dc70e2bfdc7eb580fddd36a36e 470 SUPERFAMILY SSF75304 5 458 1.27E-133 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS07100 9eb212dc70e2bfdc7eb580fddd36a36e 470 Pfam PF01425 Amidase 28 449 8.4E-103 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS07100 9eb212dc70e2bfdc7eb580fddd36a36e 470 Gene3D G3DSA:3.90.1300.10 6 465 3.5E-131 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS07100 9eb212dc70e2bfdc7eb580fddd36a36e 470 PANTHER PTHR11895 5 466 6.4E-136 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 PANTHER PTHR31793:SF9 13 135 1.4E-39 T 22-04-2016 TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 PIRSF PIRSF003230 4 143 4.5E-41 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 Gene3D G3DSA:3.10.129.10 13 140 1.4E-42 T 22-04-2016 IPR029069 HotDog domain TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 Pfam PF03061 Thioesterase superfamily 26 110 7.0E-14 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 PANTHER PTHR31793 13 135 1.4E-39 T 22-04-2016 TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 SUPERFAMILY SSF54637 12 136 5.92E-40 T 22-04-2016 IPR029069 HotDog domain TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 126 6.4E-27 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_RS04540 a6d2c31d3a365996dfcb55894a62d5b3 144 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 13 134 8.0E-45 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- TMO_RS01825 3030c5bafa7aff85d167899d877031f5 240 Gene3D G3DSA:3.40.50.2020 66 239 4.3E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS01825 3030c5bafa7aff85d167899d877031f5 240 PANTHER PTHR11907:SF9 17 240 4.1E-41 T 22-04-2016 TMO_RS01825 3030c5bafa7aff85d167899d877031f5 240 Pfam PF00156 Phosphoribosyl transferase domain 144 236 1.4E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_RS01825 3030c5bafa7aff85d167899d877031f5 240 PANTHER PTHR11907 17 240 4.1E-41 T 22-04-2016 TMO_RS01825 3030c5bafa7aff85d167899d877031f5 240 SUPERFAMILY SSF53271 60 239 1.37E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 Pfam PF04055 Radical SAM superfamily 191 351 4.8E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 Gene3D G3DSA:3.80.30.20 187 369 2.3E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 SUPERFAMILY SSF102114 183 374 3.27E-23 T 22-04-2016 TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 Pfam PF02310 B12 binding domain 64 131 2.1E-9 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 PANTHER PTHR11918 47 511 2.1E-32 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 PANTHER PTHR11918:SF64 47 511 2.1E-32 T 22-04-2016 TMO_RS02485 a8421e01764359d88c27be4a8b140263 511 SMART SM00729 186 389 2.7E-8 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 SUPERFAMILY SSF55811 138 318 3.38E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 Gene3D G3DSA:3.90.79.10 148 320 1.9E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 ProSitePatterns PS00893 Nudix box signature. 220 241 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF00293 NUDIX domain 191 298 7.5E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 PANTHER PTHR11383 29 320 6.0E-68 T 22-04-2016 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 40 152 3.2E-9 T 22-04-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 TMO_RS13535 2e83bd06c97379095c9c0aff0754f94c 321 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 155 185 4.9E-11 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 PANTHER PTHR30124:SF0 63 409 1.1E-114 T 22-04-2016 TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 PANTHER PTHR30124 63 409 1.1E-114 T 22-04-2016 TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 Pfam PF06725 3D domain 329 407 3.1E-21 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 PIRSF PIRSF019422 1 419 8.1E-139 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 SUPERFAMILY SSF50685 48 411 1.26E-132 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 Gene3D G3DSA:2.40.40.10 53 216 5.3E-35 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 Gene3D G3DSA:2.40.40.10 221 411 2.1E-53 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 SMART SM00925 153 310 1.1E-91 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 TMO_RS17055 cc36b6317801b4db121e0dc1cc22fd90 427 Pfam PF03562 MltA specific insert domain 64 310 2.3E-85 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 SUPERFAMILY SSF55144 3 175 3.31E-46 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 PANTHER PTHR35561:SF1 1 179 1.8E-40 T 22-04-2016 TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 Gene3D G3DSA:3.90.1140.10 2 175 1.7E-53 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 PANTHER PTHR35561 1 179 1.8E-40 T 22-04-2016 TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 174 1.1E-43 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 177 24.691 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 Pfam PF02834 LigT like Phosphoesterase 93 169 1.8E-13 T 22-04-2016 IPR014051 Phosphoesterase, HXTX TMO_RS09490 810229cf6922432aeca5a0dec363720f 245 Pfam PF02834 LigT like Phosphoesterase 8 86 1.4E-14 T 22-04-2016 IPR014051 Phosphoesterase, HXTX TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 SUPERFAMILY SSF46785 7 87 1.09E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Gene3D G3DSA:3.40.190.10 92 172 2.9E-20 T 22-04-2016 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Gene3D G3DSA:3.40.190.10 281 308 2.9E-20 T 22-04-2016 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 PANTHER PTHR30118:SF4 1 302 1.6E-76 T 22-04-2016 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Gene3D G3DSA:1.10.10.10 4 89 3.4E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Pfam PF03466 LysR substrate binding domain 96 305 6.1E-25 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 PANTHER PTHR30118 1 302 1.6E-76 T 22-04-2016 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.3E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 SUPERFAMILY SSF53850 92 303 8.14E-35 T 22-04-2016 TMO_RS14740 3c17f72812ae39561b17c8ad4e5f6b4d 312 Gene3D G3DSA:3.40.190.10 173 273 6.2E-20 T 22-04-2016 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 1 297 6.3E-130 T 22-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 Gene3D G3DSA:3.40.50.300 110 273 5.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 PANTHER PTHR30258 6 295 2.0E-107 T 22-04-2016 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 PANTHER PTHR30258:SF12 6 295 2.0E-107 T 22-04-2016 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 Gene3D G3DSA:3.30.450.90 10 102 2.1E-13 T 22-04-2016 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 Pfam PF00437 Type II/IV secretion system protein 10 274 4.3E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 TMO_RS11060 205aef462c44984a0fd8f9b0f99e626e 306 SUPERFAMILY SSF52540 12 272 1.74E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 PANTHER PTHR30026 1 428 3.3E-90 T 22-04-2016 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 Gene3D G3DSA:1.20.1600.10 9 404 3.1E-73 T 22-04-2016 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 SUPERFAMILY SSF56954 2 404 2.62E-83 T 22-04-2016 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 10 411 2.1E-97 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 PANTHER PTHR30026:SF3 1 428 3.3E-90 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 Pfam PF02321 Outer membrane efflux protein 220 402 2.3E-31 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS09595 62d25ccd6303528ec6adbcd3b17a1000 434 Pfam PF02321 Outer membrane efflux protein 13 199 6.1E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS01820 ac3561aa1bbcedec354f560b3fa38c0b 303 SUPERFAMILY SSF53335 33 215 7.71E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01820 ac3561aa1bbcedec354f560b3fa38c0b 303 Gene3D G3DSA:3.40.50.150 33 267 1.0E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01820 ac3561aa1bbcedec354f560b3fa38c0b 303 Pfam PF08241 Methyltransferase domain 54 140 1.8E-11 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 TMO_RS01820 ac3561aa1bbcedec354f560b3fa38c0b 303 PANTHER PTHR13090 5 290 4.3E-97 T 22-04-2016 TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 Gene3D G3DSA:1.10.443.10 195 367 7.7E-24 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 Pfam PF00589 Phage integrase family 196 362 3.4E-10 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 SUPERFAMILY SSF56349 88 367 7.36E-41 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 PANTHER PTHR30349:SF20 80 399 2.8E-24 T 22-04-2016 TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 Gene3D G3DSA:1.10.150.130 88 184 1.5E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal TMO_RS00380 6730c9dba519f9ee600283ddc344acfc 402 PANTHER PTHR30349 80 399 2.8E-24 T 22-04-2016 TMO_RS24085 c6be637f49d52e6f8f2a2b8863022603 199 Pfam PF12236 Bacteriophage head to tail connecting protein 2 198 1.8E-43 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type TMO_RS09795 c58479ee2d6cffc02cf9dbfcf591978c 349 PANTHER PTHR30106 1 345 6.4E-74 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 TMO_RS09795 c58479ee2d6cffc02cf9dbfcf591978c 349 Pfam PF03601 Conserved hypothetical protein 698 21 330 2.9E-72 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 TMO_RS29005 87f48928d581ff8d39de673dca6a3936 568 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 168 549 4.6E-122 T 22-04-2016 IPR010344 Exopolysaccharide biosynthesis protein YbjH TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 177 20.759 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Gene3D G3DSA:3.40.50.620 1 186 1.7E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 PANTHER PTHR39321 1 152 2.7E-29 T 22-04-2016 TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 SUPERFAMILY SSF52374 1 186 2.44E-38 T 22-04-2016 TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 187 2.2E-33 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS14970 74cdd7d31bbfc29d3e7ea9c242cd5505 203 Pfam PF01467 Cytidylyltransferase-like 5 186 1.5E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS13015 1dcba35ebeafb7d86e213cf94ae48599 232 Gene3D G3DSA:3.40.50.880 10 212 6.2E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS13015 1dcba35ebeafb7d86e213cf94ae48599 232 PANTHER PTHR11019 11 165 1.4E-32 T 22-04-2016 TMO_RS13015 1dcba35ebeafb7d86e213cf94ae48599 232 Pfam PF01965 DJ-1/PfpI family 9 169 1.0E-26 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS13015 1dcba35ebeafb7d86e213cf94ae48599 232 SUPERFAMILY SSF52317 8 189 1.42E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS13015 1dcba35ebeafb7d86e213cf94ae48599 232 PANTHER PTHR11019:SF25 11 165 1.4E-32 T 22-04-2016 TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 PANTHER PTHR32308:SF0 2 287 9.3E-83 T 22-04-2016 TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 3.0E-48 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 SUPERFAMILY SSF51621 5 233 1.03E-66 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 PIRSF PIRSF015582 1 289 1.2E-78 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 PANTHER PTHR32308 2 287 9.3E-83 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like TMO_RS16495 c5fb4ce1c3c49c47d7c45120c2531c6e 290 Gene3D G3DSA:3.20.20.60 3 233 2.3E-77 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.374 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 Gene3D G3DSA:2.30.33.40 2 95 6.0E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 SUPERFAMILY SSF50129 1 95 1.82E-36 T 22-04-2016 IPR011032 GroES-like TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 PANTHER PTHR10772 1 95 5.5E-45 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 81 94 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 2.7E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 SMART SM00883 2 94 1.8E-57 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 TMO_RS08530 6266b44d62914805668edab48e7bc0d2 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 404 7.5E-31 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PIRSF PIRSF001529 1 429 6.7E-162 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 Gene3D G3DSA:3.30.930.10 105 425 2.5E-131 T 22-04-2016 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PANTHER PTHR11778:SF0 1 426 3.0E-189 T 22-04-2016 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 SUPERFAMILY SSF55681 116 422 3.11E-88 T 22-04-2016 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PANTHER PTHR11778 1 426 3.0E-189 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 421 3.5E-150 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 SUPERFAMILY SSF46589 1 112 6.28E-29 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.9E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 2.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 2.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 2.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 2.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 2.7E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 426 40.285 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 TMO_RS07740 40604b3a62210795e73a7ecabbdff2ed 429 Gene3D G3DSA:1.10.287.40 1 104 4.3E-30 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 SUPERFAMILY SSF161098 78 261 1.44E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 272 9.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 PANTHER PTHR30151 25 273 2.2E-89 T 22-04-2016 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 68 265 1.2E-69 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 Gene3D G3DSA:1.10.3720.10 76 271 6.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10800 ab5fccccc933b5da4c4d07653713a2ac 273 PANTHER PTHR30151:SF7 25 273 2.2E-89 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 PANTHER PTHR30327 1 187 3.4E-55 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 Gene3D G3DSA:3.30.70.1300 50 130 3.3E-25 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 Gene3D G3DSA:3.40.1740.10 131 177 1.8E-34 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 Gene3D G3DSA:3.40.1740.10 5 44 1.8E-34 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 SUPERFAMILY SSF143456 7 187 4.97E-61 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 Pfam PF02622 Uncharacterized ACR, COG1678 16 174 8.3E-49 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 PANTHER PTHR30327:SF1 1 187 3.4E-55 T 22-04-2016 TMO_RS14110 a3c71706f8c6fda2886544d186938237 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 187 36.412 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 SUPERFAMILY SSF51556 21 48 9.43E-56 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 SUPERFAMILY SSF51556 99 389 9.43E-56 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 PANTHER PTHR21240 147 399 4.0E-22 T 22-04-2016 TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 Gene3D G3DSA:3.20.20.140 23 48 3.1E-51 T 22-04-2016 TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 Gene3D G3DSA:3.20.20.140 86 393 3.1E-51 T 22-04-2016 TMO_RS00060 81958694f1777ec2eb4d77e1edd60efa 405 Pfam PF04909 Amidohydrolase 137 389 4.6E-23 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 SMART SM00327 405 615 3.1E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 11 612 2.7E-240 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 PIRSF PIRSF031715 1 618 1.7E-238 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 SUPERFAMILY SSF53300 408 602 1.17E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 Pfam PF06213 Cobalamin biosynthesis protein CobT 9 273 6.1E-81 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 395 611 8.0E-106 T 22-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS01715 80a532c982bf6216e62a9f3a88b5f8e7 626 Gene3D G3DSA:3.40.50.410 408 583 3.4E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 Gene3D G3DSA:3.10.129.10 23 154 1.6E-30 T 22-04-2016 IPR029069 HotDog domain TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 PANTHER PTHR12418 38 166 5.0E-20 T 22-04-2016 TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 PANTHER PTHR12418:SF28 38 166 5.0E-20 T 22-04-2016 TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 Pfam PF03061 Thioesterase superfamily 64 135 1.2E-10 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 34 151 1.7E-19 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS11470 75f07525e6ef56147b79c117bc10a433 176 SUPERFAMILY SSF54637 24 156 7.47E-28 T 22-04-2016 IPR029069 HotDog domain TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 SUPERFAMILY SSF52540 355 601 1.55E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 Gene3D G3DSA:1.20.1560.10 26 348 5.3E-64 T 22-04-2016 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 PANTHER PTHR24221:SF250 27 610 5.8E-292 T 22-04-2016 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 PANTHER PTHR24221 27 610 5.8E-292 T 22-04-2016 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 Pfam PF00664 ABC transporter transmembrane region 44 319 7.6E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 Gene3D G3DSA:3.40.50.300 366 595 9.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 SMART SM00382 391 577 3.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 SUPERFAMILY SSF90123 25 354 8.89E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS13380 840eb0d64fa5ac352ecc0595954fe6d0 618 Pfam PF00005 ABC transporter 382 531 6.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS02870 f76ca09ac9f3321b67af2d896d695e5e 272 Gene3D G3DSA:3.40.50.1820 79 251 4.6E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS02870 f76ca09ac9f3321b67af2d896d695e5e 272 SUPERFAMILY SSF53474 107 251 2.54E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.6E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 Gene3D G3DSA:1.10.10.10 1 83 8.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 SUPERFAMILY SSF53850 91 263 8.36E-27 T 22-04-2016 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 Gene3D G3DSA:3.40.190.10 170 256 4.0E-16 T 22-04-2016 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 Pfam PF03466 LysR substrate binding domain 91 263 1.3E-29 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 Gene3D G3DSA:3.40.190.10 103 169 2.4E-11 T 22-04-2016 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 PANTHER PTHR30126 1 238 2.7E-54 T 22-04-2016 TMO_RS16265 647114b475baa576a4996a93dd38c2c4 296 SUPERFAMILY SSF46785 1 83 1.42E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01520 0822fac56aa26c462f4d7227a4517a17 318 PANTHER PTHR30465:SF59 1 313 3.5E-123 T 22-04-2016 TMO_RS01520 0822fac56aa26c462f4d7227a4517a17 318 PANTHER PTHR30465 1 313 3.5E-123 T 22-04-2016 TMO_RS01520 0822fac56aa26c462f4d7227a4517a17 318 Gene3D G3DSA:1.10.3720.10 92 308 5.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01520 0822fac56aa26c462f4d7227a4517a17 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 313 1.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01520 0822fac56aa26c462f4d7227a4517a17 318 SUPERFAMILY SSF161098 91 313 7.46E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07660 9b978366bcfe9b9b4d27c9338da9baea 239 Gene3D G3DSA:3.60.20.10 2 208 9.2E-16 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS07660 9b978366bcfe9b9b4d27c9338da9baea 239 PIRSF PIRSF009120 1 239 1.5E-97 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 TMO_RS07660 9b978366bcfe9b9b4d27c9338da9baea 239 SUPERFAMILY SSF56235 2 237 1.36E-33 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS07660 9b978366bcfe9b9b4d27c9338da9baea 239 Pfam PF00227 Proteasome subunit 4 195 1.4E-6 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 TMO_RS17290 9ba4112a3003f7cee86b9c3ddfb97d2b 371 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 177 371 39.103 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS17290 9ba4112a3003f7cee86b9c3ddfb97d2b 371 SUPERFAMILY SSF142695 179 348 1.31E-58 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS17290 9ba4112a3003f7cee86b9c3ddfb97d2b 371 PANTHER PTHR21327 161 371 1.0E-92 T 22-04-2016 TMO_RS17290 9ba4112a3003f7cee86b9c3ddfb97d2b 371 Pfam PF00925 GTP cyclohydrolase II 181 347 3.0E-63 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS17290 9ba4112a3003f7cee86b9c3ddfb97d2b 371 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 182 371 2.8E-66 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 SUPERFAMILY SSF46785 2 76 2.96E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 4.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 4.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 4.7E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 PANTHER PTHR33154:SF11 4 82 8.9E-13 T 22-04-2016 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 PANTHER PTHR33154 4 82 8.9E-13 T 22-04-2016 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 SMART SM00418 5 79 2.7E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 Gene3D G3DSA:1.10.10.10 4 82 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01630 9c1a73aedf010eaddd550fc028844b5c 86 Pfam PF12840 Helix-turn-helix domain 6 63 1.5E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 PANTHER PTHR22911 20 317 3.4E-57 T 22-04-2016 TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 SUPERFAMILY SSF103481 194 292 2.48E-14 T 22-04-2016 TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 PANTHER PTHR22911:SF56 20 317 3.4E-57 T 22-04-2016 TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 Pfam PF00892 EamA-like transporter family 20 150 1.8E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 Pfam PF00892 EamA-like transporter family 160 289 1.7E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS15925 dae43b4120d632fc96f0659f067ba406 320 SUPERFAMILY SSF103481 53 154 2.22E-17 T 22-04-2016 TMO_RS04185 c0d5804c4a43774052a57ec33119878b 138 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 53 136 1.2E-36 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 TMO_RS04185 c0d5804c4a43774052a57ec33119878b 138 PANTHER PTHR10160 53 136 7.8E-36 T 22-04-2016 TMO_RS19960 36e01d2b8c97c6cd43306de0d23f9e43 66 PANTHER PTHR32552:SF17 2 66 7.7E-14 T 22-04-2016 TMO_RS19960 36e01d2b8c97c6cd43306de0d23f9e43 66 PANTHER PTHR32552 2 66 7.7E-14 T 22-04-2016 TMO_RS19960 36e01d2b8c97c6cd43306de0d23f9e43 66 SUPERFAMILY SSF56935 2 65 3.07E-16 T 22-04-2016 TMO_RS19960 36e01d2b8c97c6cd43306de0d23f9e43 66 Gene3D G3DSA:2.170.130.10 1 54 2.1E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS19960 36e01d2b8c97c6cd43306de0d23f9e43 66 Pfam PF07715 TonB-dependent Receptor Plug Domain 2 42 3.9E-6 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS29585 70a8c97a37a062ccea4036d89c93f4e4 219 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 122 214 5.3E-13 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_RS29585 70a8c97a37a062ccea4036d89c93f4e4 219 SMART SM00702 33 214 3.0E-6 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_RS19050 16623a117898948e61924c61124539a6 231 SUPERFAMILY SSF50331 101 214 2.76E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS19050 16623a117898948e61924c61124539a6 231 PANTHER PTHR24220 1 195 4.1E-60 T 22-04-2016 TMO_RS19050 16623a117898948e61924c61124539a6 231 Pfam PF12857 TOBE-like domain 155 210 1.6E-11 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 TMO_RS19050 16623a117898948e61924c61124539a6 231 Gene3D G3DSA:2.40.50.100 159 211 7.5E-6 T 22-04-2016 TMO_RS19050 16623a117898948e61924c61124539a6 231 SUPERFAMILY SSF52540 1 106 7.55E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS19050 16623a117898948e61924c61124539a6 231 Gene3D G3DSA:3.40.50.300 1 103 7.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS19050 16623a117898948e61924c61124539a6 231 Pfam PF00005 ABC transporter 1 25 1.2E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS19050 16623a117898948e61924c61124539a6 231 PANTHER PTHR24220:SF123 1 195 4.1E-60 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 SUPERFAMILY SSF53067 8 181 9.71E-16 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PANTHER PTHR19375 299 425 6.5E-72 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PANTHER PTHR19375 6 242 6.5E-72 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PRINTS PR00301 70kDa heat shock protein signature 377 393 7.7E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PRINTS PR00301 70kDa heat shock protein signature 7 20 7.7E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 SUPERFAMILY SSF53067 187 250 1.91E-35 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 SUPERFAMILY SSF53067 302 423 1.91E-35 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 95 194 2.9E-14 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 7 35 2.9E-14 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PANTHER PTHR19375:SF182 299 425 6.5E-72 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 PANTHER PTHR19375:SF182 6 242 6.5E-72 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.90.640.10 311 354 2.0E-5 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Pfam PF00012 Hsp70 protein 311 422 2.0E-15 T 22-04-2016 IPR013126 Heat shock protein 70 family TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 195 228 5.5E-15 T 22-04-2016 TMO_RS16555 f6aa07a4da78264c152a07a9a138503f 432 Gene3D G3DSA:3.30.420.40 362 404 5.5E-15 T 22-04-2016 TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 PANTHER PTHR13696:SF3 1 256 2.0E-60 T 22-04-2016 TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 PANTHER PTHR13696 1 256 2.0E-60 T 22-04-2016 TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 Gene3D G3DSA:3.40.50.300 19 259 4.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 PIRSF PIRSF003092 4 260 5.8E-58 T 22-04-2016 IPR025501 ATP binding protein MinD TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 21 227 4.4E-23 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_RS06240 6d9f5751db430add9f813bc6f87f94bc 261 SUPERFAMILY SSF52540 19 259 8.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 PANTHER PTHR20919 2 312 9.7E-115 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 Pfam PF04204 Homoserine O-succinyltransferase 2 298 1.4E-121 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 SUPERFAMILY SSF52317 18 296 8.25E-96 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 Gene3D G3DSA:3.40.50.880 34 300 8.3E-107 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 PANTHER PTHR20919:SF0 2 312 9.7E-115 T 22-04-2016 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 292 4.0E-110 T 22-04-2016 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.8E-101 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 PIRSF PIRSF000450 1 308 1.1E-128 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 TMO_RS03100 31bc9d055555ef2569f0652486f5fb04 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 300 48.351 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 PANTHER PTHR12599:SF7 2 96 5.0E-45 T 22-04-2016 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.87 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 SUPERFAMILY SSF55248 1 95 2.75E-33 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 PANTHER PTHR12599 2 96 5.0E-45 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 Gene3D G3DSA:3.30.1360.20 2 95 1.5E-35 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 TMO_RS15940 5e15289e63af705989ac0c85a6dba65b 102 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 2.2E-29 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 TMO_RS02350 32bfb87cabc07cade6b72ddbbc3308cd 220 SUPERFAMILY SSF141523 74 209 6.8E-12 T 22-04-2016 TMO_RS02350 32bfb87cabc07cade6b72ddbbc3308cd 220 Gene3D G3DSA:2.40.440.10 76 207 2.4E-10 T 22-04-2016 TMO_RS02350 32bfb87cabc07cade6b72ddbbc3308cd 220 Pfam PF03734 L,D-transpeptidase catalytic domain 80 207 9.3E-10 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 TMO_RS02350 32bfb87cabc07cade6b72ddbbc3308cd 220 PANTHER PTHR36699 81 206 9.2E-28 T 22-04-2016 TMO_RS11735 3feebf3049faaef7763a5339d8a2a445 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 29 230 7.5E-51 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS11735 3feebf3049faaef7763a5339d8a2a445 231 SUPERFAMILY SSF56529 22 231 5.1E-65 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS11735 3feebf3049faaef7763a5339d8a2a445 231 PANTHER PTHR11820:SF7 6 230 1.8E-84 T 22-04-2016 TMO_RS11735 3feebf3049faaef7763a5339d8a2a445 231 PANTHER PTHR11820 6 230 1.8E-84 T 22-04-2016 TMO_RS11735 3feebf3049faaef7763a5339d8a2a445 231 Gene3D G3DSA:3.90.850.10 23 231 4.6E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PANTHER PTHR30386 143 433 9.3E-108 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PANTHER PTHR30386 24 115 9.3E-108 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 23 433 9.4E-110 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PANTHER PTHR30386:SF4 143 433 9.3E-108 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PANTHER PTHR30386:SF4 24 115 9.3E-108 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 Pfam PF13437 HlyD family secretion protein 284 381 2.7E-16 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 ProSitePatterns PS00543 HlyD family secretion proteins signature. 397 419 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 Gene3D G3DSA:2.40.50.100 67 94 2.2E-15 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 Gene3D G3DSA:2.40.50.100 281 315 2.2E-15 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 SUPERFAMILY SSF111369 52 120 2.35E-5 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 Pfam PF13533 Biotin-lipoyl like 61 96 3.8E-6 T 22-04-2016 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 296 317 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 353 376 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 412 432 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 353 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 30 53 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS05370 3bd44431c8fc550e459caefd4aef223f 433 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 412 2.0E-42 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 PANTHER PTHR10060:SF20 1 258 4.5E-116 T 22-04-2016 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 PANTHER PTHR10060 1 258 4.5E-116 T 22-04-2016 IPR001130 TatD family GO:0016788 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 255 7.4E-83 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 Pfam PF01026 TatD related DNase 3 255 2.4E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 Gene3D G3DSA:3.20.20.140 1 255 2.5E-84 T 22-04-2016 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 SUPERFAMILY SSF51556 2 255 5.38E-84 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS08450 3cca787f48090c779993d92271c1b4b2 268 PIRSF PIRSF005902 1 258 4.8E-74 T 22-04-2016 IPR001130 TatD family GO:0016788 TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 323 1.5E-48 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 SUPERFAMILY SSF53850 146 232 8.14E-5 T 22-04-2016 TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 2.7E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 PIRSF PIRSF039026 1 363 7.1E-125 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 21 2.3E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 PANTHER PTHR33376:SF5 1 348 1.3E-108 T 22-04-2016 TMO_RS08080 afac391346dd36e2ea718dcca0cb4ab3 369 PANTHER PTHR33376 1 348 1.3E-108 T 22-04-2016 TMO_RS04320 58749cb72202bb406ea326ff548d3c1f 302 SUPERFAMILY SSF102198 48 301 1.96E-28 T 22-04-2016 TMO_RS04320 58749cb72202bb406ea326ff548d3c1f 302 Pfam PF04199 Putative cyclase 52 237 2.5E-25 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 TMO_RS04320 58749cb72202bb406ea326ff548d3c1f 302 Gene3D G3DSA:3.50.30.50 48 301 8.9E-33 T 22-04-2016 TMO_RS04320 58749cb72202bb406ea326ff548d3c1f 302 PANTHER PTHR34861 20 302 1.7E-34 T 22-04-2016 TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 PRINTS PR00418 DNA topoisomerase II family signature 3 18 2.4E-13 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 PRINTS PR00418 DNA topoisomerase II family signature 38 51 2.4E-13 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 PRINTS PR00418 DNA topoisomerase II family signature 81 82 2.4E-13 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 PANTHER PTHR10169 3 82 4.8E-38 T 22-04-2016 TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2 82 7.4E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 Gene3D G3DSA:3.30.565.10 3 82 8.1E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17970 b284a828812a71dc97a90728d705fd14 82 SUPERFAMILY SSF55874 3 82 4.19E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:3.40.190.10 178 269 2.5E-32 T 22-04-2016 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:3.40.190.10 88 177 3.7E-24 T 22-04-2016 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 Gene3D G3DSA:1.10.10.10 1 81 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 Pfam PF03466 LysR substrate binding domain 87 293 2.0E-36 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 PANTHER PTHR30346:SF6 1 296 2.7E-93 T 22-04-2016 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 SUPERFAMILY SSF53850 88 297 2.29E-33 T 22-04-2016 TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 SUPERFAMILY SSF46785 1 84 1.22E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03705 026f11d7c21b428df85f42faa44ab256 299 PANTHER PTHR30346 1 296 2.7E-93 T 22-04-2016 TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 PANTHER PTHR37426 1 295 8.1E-77 T 22-04-2016 TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 Gene3D G3DSA:3.40.50.150 1 282 5.4E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 279 36.521 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 SUPERFAMILY SSF53335 8 283 6.41E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 289 4.7E-57 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 TMO_RS00055 c69c58bffa1dceafa858edb1b3d32e4b 295 PANTHER PTHR37426:SF1 1 295 8.1E-77 T 22-04-2016 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 Pfam PF00795 Carbon-nitrogen hydrolase 276 490 9.6E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 68 475 2.7E-85 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 PANTHER PTHR38686 5 531 3.1E-69 T 22-04-2016 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 13 512 20.472 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 SUPERFAMILY SSF56317 228 505 1.57E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS17805 3459f75c304d10855942a89cc3abe749 534 Gene3D G3DSA:3.60.110.10 227 491 1.1E-22 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 Gene3D G3DSA:3.40.50.300 1 242 2.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 PANTHER PTHR24220:SF447 3 246 6.4E-129 T 22-04-2016 TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 SUPERFAMILY SSF52540 1 241 5.09E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 SMART SM00382 26 219 2.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 PANTHER PTHR24220 3 246 6.4E-129 T 22-04-2016 TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 PIRSF PIRSF039085 1 247 6.3E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_RS14425 6ab6ffd14e65d0c799193ba4b2c3007c 247 Pfam PF00005 ABC transporter 17 171 1.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 SUPERFAMILY SSF52833 41 174 7.58E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 Gene3D G3DSA:3.40.30.10 8 175 2.7E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 PANTHER PTHR10681:SF107 2 174 5.4E-44 T 22-04-2016 TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 Pfam PF08534 Redoxin 39 161 2.7E-13 T 22-04-2016 IPR013740 Redoxin GO:0016491 TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 PANTHER PTHR10681 2 174 5.4E-44 T 22-04-2016 TMO_RS15535 e17e39b16fc7f8b7cbbabd0222b20fc1 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 172 1.8E-47 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 TMO_RS06115 a7b35b558fc2bf0cd1c18486b16b2141 273 Pfam PF02698 DUF218 domain 85 249 6.9E-23 T 22-04-2016 IPR003848 Domain of unknown function DUF218 TMO_RS06115 a7b35b558fc2bf0cd1c18486b16b2141 273 Gene3D G3DSA:3.40.50.620 85 219 3.6E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS06115 a7b35b558fc2bf0cd1c18486b16b2141 273 PANTHER PTHR30336:SF1 1 266 5.6E-37 T 22-04-2016 TMO_RS06115 a7b35b558fc2bf0cd1c18486b16b2141 273 PANTHER PTHR30336 1 266 5.6E-37 T 22-04-2016 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 SUPERFAMILY SSF55200 90 174 2.09E-33 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 Gene3D G3DSA:3.10.20.80 10 85 2.6E-35 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 SUPERFAMILY SSF54364 12 85 2.22E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 90 174 2.7E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 Gene3D G3DSA:3.30.110.10 86 175 4.3E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 14 175 3.3E-64 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 7 177 29.803 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 PANTHER PTHR10938 2 190 2.4E-70 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 14 83 3.9E-31 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 TMO_RS01005 b5362c9ff80a29ecf941c1e16eb70e5b 192 ProSitePatterns PS00938 Initiation factor 3 signature. 65 78 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 SUPERFAMILY SSF88659 117 176 4.14E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Gene3D G3DSA:1.10.1740.10 13 106 1.7E-12 T 22-04-2016 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 SUPERFAMILY SSF88946 13 95 1.06E-13 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Pfam PF08281 Sigma-70, region 4 128 176 1.5E-7 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 PANTHER PTHR30173:SF15 9 396 2.0E-160 T 22-04-2016 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Pfam PF04542 Sigma-70 region 2 21 85 4.8E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 PANTHER PTHR30173 9 396 2.0E-160 T 22-04-2016 TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 Gene3D G3DSA:1.10.10.10 122 176 2.8E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13885 da6b3a400ff54dfc5d00ac6c05db0a7d 426 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 177 4.0E-13 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 PANTHER PTHR24031:SF261 1 472 2.3E-186 T 22-04-2016 TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 SMART SM00487 21 224 1.2E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 SUPERFAMILY SSF52540 24 102 5.04E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 PANTHER PTHR24031 1 472 2.3E-186 T 22-04-2016 TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 Gene3D G3DSA:3.40.50.300 2 213 2.3E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 Gene3D G3DSA:3.40.50.300 214 370 1.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 SMART SM00490 260 341 1.1E-31 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 Pfam PF00270 DEAD/DEAH box helicase 26 195 9.2E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 Pfam PF00271 Helicase conserved C-terminal domain 236 341 4.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS03790 05661c78963d28a7514b30ddc4cec45b 528 SUPERFAMILY SSF52540 77 362 3.34E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02900 32b57dadbf32e8dc7e9523ea06ccf3af 128 Pfam PF02566 OsmC-like protein 34 125 1.6E-14 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS02900 32b57dadbf32e8dc7e9523ea06ccf3af 128 SUPERFAMILY SSF82784 10 127 1.96E-31 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS02900 32b57dadbf32e8dc7e9523ea06ccf3af 128 PANTHER PTHR39624:SF2 1 127 3.0E-31 T 22-04-2016 TMO_RS02900 32b57dadbf32e8dc7e9523ea06ccf3af 128 Gene3D G3DSA:3.30.300.20 12 127 6.9E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS02900 32b57dadbf32e8dc7e9523ea06ccf3af 128 PANTHER PTHR39624 1 127 3.0E-31 T 22-04-2016 TMO_RS13795 2e55f85f9abbc392c79bf860068d87d2 286 PANTHER PTHR30477 1 275 8.6E-121 T 22-04-2016 TMO_RS13795 2e55f85f9abbc392c79bf860068d87d2 286 PANTHER PTHR30477:SF13 1 275 8.6E-121 T 22-04-2016 TMO_RS13795 2e55f85f9abbc392c79bf860068d87d2 286 SUPERFAMILY SSF81345 4 260 6.41E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS13795 2e55f85f9abbc392c79bf860068d87d2 286 Gene3D G3DSA:1.10.3470.10 60 242 3.7E-9 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS13795 2e55f85f9abbc392c79bf860068d87d2 286 Pfam PF00950 ABC 3 transport family 10 263 2.3E-77 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 2.8E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 SUPERFAMILY SSF46785 7 99 3.26E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 SMART SM00895 84 207 3.2E-20 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 PANTHER PTHR11751:SF356 12 100 8.7E-27 T 22-04-2016 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 SMART SM00345 16 74 2.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 Pfam PF07729 FCD domain 84 206 1.9E-29 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 SUPERFAMILY SSF48008 80 206 5.49E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 Gene3D G3DSA:1.10.10.10 3 75 9.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 Gene3D G3DSA:1.20.120.530 78 206 1.7E-31 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS07060 ce1d7888d7ee1e2edbbf0c0152302375 207 PANTHER PTHR11751 12 100 8.7E-27 T 22-04-2016 TMO_RS12120 4fa914c8cf3f1cb4b337add48ff010ee 372 Pfam PF00268 Ribonucleotide reductase, small chain 35 296 3.5E-63 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 TMO_RS12120 4fa914c8cf3f1cb4b337add48ff010ee 372 SUPERFAMILY SSF47240 35 339 2.76E-76 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS12120 4fa914c8cf3f1cb4b337add48ff010ee 372 Gene3D G3DSA:1.10.620.20 31 320 2.6E-86 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 TMO_RS12120 4fa914c8cf3f1cb4b337add48ff010ee 372 PIRSF PIRSF000355 19 348 1.0E-89 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 TMO_RS12120 4fa914c8cf3f1cb4b337add48ff010ee 372 PANTHER PTHR23409 35 356 1.2E-57 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 Pfam PF07690 Major Facilitator Superfamily 29 193 8.3E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 Pfam PF07690 Major Facilitator Superfamily 222 386 3.5E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 PANTHER PTHR23521:SF2 21 389 7.7E-57 T 22-04-2016 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 SUPERFAMILY SSF103473 24 389 1.96E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 Gene3D G3DSA:1.20.1250.20 215 386 6.1E-14 T 22-04-2016 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 Gene3D G3DSA:1.20.1250.20 29 196 1.5E-14 T 22-04-2016 TMO_RS07490 d0c9e2517a7988d3aba72190b429ec63 394 PANTHER PTHR23521 21 389 7.7E-57 T 22-04-2016 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 1.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 1.1E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 PANTHER PTHR30450 1 228 6.6E-90 T 22-04-2016 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 SUPERFAMILY SSF161098 10 207 6.67E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 PANTHER PTHR30450:SF7 1 228 6.6E-90 T 22-04-2016 TMO_RS15570 f3020e59d685952126ce4859f6cca1e5 228 Gene3D G3DSA:1.10.3720.10 8 223 5.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 275 2.1E-91 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 20 278 1.5E-117 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 PANTHER PTHR30406:SF1 15 280 4.7E-144 T 22-04-2016 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 PANTHER PTHR30406 15 280 4.7E-144 T 22-04-2016 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 SUPERFAMILY SSF161098 19 272 1.57E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 277 2.1E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03565 ee763b5ab2eaf31c55b922666350dcab 284 Gene3D G3DSA:1.10.3720.10 26 278 1.3E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 PANTHER PTHR33570:SF2 8 128 4.1E-44 T 22-04-2016 TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 117 3.7E-20 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 Gene3D G3DSA:1.20.1290.10 6 123 1.3E-23 T 22-04-2016 IPR029032 AhpD-like TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 8 123 1.8E-54 T 22-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 PANTHER PTHR33570 8 128 4.1E-44 T 22-04-2016 TMO_RS12240 ba09bab7f7dd457b71a410b39ceb8afa 137 SUPERFAMILY SSF69118 7 122 1.38E-31 T 22-04-2016 IPR029032 AhpD-like TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 66 5.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 SUPERFAMILY SSF46785 11 114 1.12E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 PANTHER PTHR30537 1 315 1.9E-90 T 22-04-2016 TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:1.10.10.10 10 91 5.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 Pfam PF03466 LysR substrate binding domain 91 299 3.6E-34 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:3.40.190.10 181 267 1.2E-15 T 22-04-2016 TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 Gene3D G3DSA:3.40.190.10 95 180 1.4E-14 T 22-04-2016 TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 PANTHER PTHR30537:SF1 1 315 1.9E-90 T 22-04-2016 TMO_RS12410 9883f617493462d81b6e9b31aec2c0e6 315 SUPERFAMILY SSF53850 87 301 2.53E-36 T 22-04-2016 TMO_RS17690 a2d513a6887ef7d5cdd8c403f57186c6 260 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 39 259 1.3E-76 T 22-04-2016 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 PANTHER PTHR23023 10 480 3.6E-178 T 22-04-2016 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 SUPERFAMILY SSF51905 279 463 3.75E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 PANTHER PTHR23023:SF132 10 480 3.6E-178 T 22-04-2016 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 Gene3D G3DSA:3.50.50.60 11 216 4.1E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 Gene3D G3DSA:3.50.50.60 326 480 1.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 16 222 1.2E-17 T 22-04-2016 TMO_RS09955 b1849ead63a4e559d50d3e75daf86bab 480 SUPERFAMILY SSF51905 11 233 8.42E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 PANTHER PTHR11228 50 351 2.2E-82 T 22-04-2016 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 PANTHER PTHR11228:SF26 50 351 2.2E-82 T 22-04-2016 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 Pfam PF04055 Radical SAM superfamily 107 284 1.4E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 Gene3D G3DSA:3.20.20.70 107 293 9.2E-10 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 SUPERFAMILY SSF102114 92 334 4.97E-16 T 22-04-2016 TMO_RS13505 50fddc93eb88202cce62b2aaca77c3e5 402 SMART SM00729 103 328 4.4E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 Gene3D G3DSA:2.60.120.10 20 272 2.4E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 Pfam PF02678 Pirin 37 137 7.2E-36 T 22-04-2016 IPR003829 Pirin, N-terminal domain TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 SUPERFAMILY SSF51182 20 298 7.01E-91 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 PANTHER PTHR13903:SF8 20 298 1.4E-125 T 22-04-2016 TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 PIRSF PIRSF006232 18 298 6.2E-97 T 22-04-2016 IPR012093 Pirin TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 Pfam PF05726 Pirin C-terminal cupin domain 193 298 2.1E-29 T 22-04-2016 IPR008778 Pirin, C-terminal domain TMO_RS06795 4795b8096cdb62d9dc43277ebb3240f4 298 PANTHER PTHR13903 20 298 1.4E-125 T 22-04-2016 IPR012093 Pirin TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 PANTHER PTHR30137:SF2 1 332 4.5E-134 T 22-04-2016 TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 SUPERFAMILY SSF51679 8 331 2.09E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 Gene3D G3DSA:3.20.20.30 8 329 4.4E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 331 1.6E-127 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 PANTHER PTHR30137 1 332 4.5E-134 T 22-04-2016 TMO_RS08510 e3335b84f08351c8ce239bbf2e81b20b 340 Pfam PF00296 Luciferase-like monooxygenase 19 303 3.3E-35 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 6.7E-70 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 Pfam PF01728 FtsJ-like methyltransferase 62 245 1.0E-20 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 PANTHER PTHR32319 1 245 3.3E-121 T 22-04-2016 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 SUPERFAMILY SSF53335 59 245 1.83E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 Pfam PF01479 S4 domain 7 51 2.1E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 SMART SM00363 6 68 4.4E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 Gene3D G3DSA:3.10.290.10 6 92 2.0E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 Gene3D G3DSA:3.40.50.150 93 179 1.1E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 PANTHER PTHR32319:SF0 1 245 3.3E-121 T 22-04-2016 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 SUPERFAMILY SSF55174 5 69 2.5E-14 T 22-04-2016 TMO_RS04860 fc06ac5bc1c5468f2782eac83bca12b3 269 PIRSF PIRSF005578 1 262 2.2E-98 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 TMO_RS04555 f25de24cde48b01370d9260e03080e49 152 PANTHER PTHR30558:SF7 4 151 3.1E-42 T 22-04-2016 TMO_RS04555 f25de24cde48b01370d9260e03080e49 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 22 144 8.9E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 TMO_RS04555 f25de24cde48b01370d9260e03080e49 152 PANTHER PTHR30558 4 151 3.1E-42 T 22-04-2016 TMO_RS04555 f25de24cde48b01370d9260e03080e49 152 TIGRFAM TIGR02801 tolR: protein TolR 23 142 2.5E-41 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 TMO_RS09880 f3adc8a1db2fc0c8d0660023a68f176d 481 PANTHER PTHR22773:SF41 1 480 1.2E-178 T 22-04-2016 TMO_RS09880 f3adc8a1db2fc0c8d0660023a68f176d 481 PANTHER PTHR22773 1 480 1.2E-178 T 22-04-2016 TMO_RS09880 f3adc8a1db2fc0c8d0660023a68f176d 481 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 11 468 3.9E-150 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TMO_RS09880 f3adc8a1db2fc0c8d0660023a68f176d 481 Pfam PF00361 Proton-conducting membrane transporter 126 417 8.3E-85 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS09880 f3adc8a1db2fc0c8d0660023a68f176d 481 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 7 469 18.578 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 TMO_RS05950 4a6e4dce137e393cd359f97568b3c462 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 296 4.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05950 4a6e4dce137e393cd359f97568b3c462 302 PANTHER PTHR30465 38 302 5.3E-78 T 22-04-2016 TMO_RS05950 4a6e4dce137e393cd359f97568b3c462 302 Gene3D G3DSA:1.10.3720.10 94 298 8.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05950 4a6e4dce137e393cd359f97568b3c462 302 SUPERFAMILY SSF161098 95 282 8.9E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05950 4a6e4dce137e393cd359f97568b3c462 302 PANTHER PTHR30465:SF2 38 302 5.3E-78 T 22-04-2016 TMO_RS16685 d16193cc3f742d392e2877eb13508abc 234 Gene3D G3DSA:3.40.50.1820 21 231 8.9E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16685 d16193cc3f742d392e2877eb13508abc 234 SUPERFAMILY SSF53474 20 232 6.72E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16685 d16193cc3f742d392e2877eb13508abc 234 PANTHER PTHR10655 10 232 4.0E-33 T 22-04-2016 TMO_RS16685 d16193cc3f742d392e2877eb13508abc 234 Pfam PF02230 Phospholipase/Carboxylesterase 19 227 3.7E-28 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 PANTHER PTHR30473:SF1 104 377 2.9E-145 T 22-04-2016 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 PANTHER PTHR30473:SF1 1 76 2.9E-145 T 22-04-2016 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 Gene3D G3DSA:3.40.50.300 148 352 1.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 PANTHER PTHR30473 104 377 2.9E-145 T 22-04-2016 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 PANTHER PTHR30473 1 76 2.9E-145 T 22-04-2016 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 Pfam PF02562 PhoH-like protein 150 353 9.5E-91 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 TMO_RS17790 0107f874e91e986325a81d58c63aab99 380 SUPERFAMILY SSF52540 149 328 1.17E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07405 490fc263799820049999fca646ae1aba 186 Pfam PF11821 Protein of unknown function (DUF3341) 12 177 8.9E-59 T 22-04-2016 IPR021776 Protein of unknown function DUF3341 TMO_RS07405 490fc263799820049999fca646ae1aba 186 PANTHER PTHR40394 9 179 3.3E-36 T 22-04-2016 TMO_RS07405 490fc263799820049999fca646ae1aba 186 PANTHER PTHR40394:SF1 9 179 3.3E-36 T 22-04-2016 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 11 28 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PANTHER PTHR11985:SF1 5 505 5.0E-166 T 22-04-2016 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 SUPERFAMILY SSF54373 235 328 8.24E-7 T 22-04-2016 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PANTHER PTHR11985 5 505 5.0E-166 T 22-04-2016 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 80 92 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 354 366 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 322 328 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 2.2E-25 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 Pfam PF01266 FAD dependent oxidoreductase 7 364 1.5E-53 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 394 495 9.8E-11 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 SUPERFAMILY SSF51905 321 376 7.59E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 SUPERFAMILY SSF51905 6 269 7.59E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02275 08c28fdcda43fb32e16c460947c73a83 514 Gene3D G3DSA:3.50.50.60 6 248 1.3E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 PANTHER PTHR34698 118 271 3.8E-76 T 22-04-2016 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 PANTHER PTHR34698 1 101 3.8E-76 T 22-04-2016 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 SUPERFAMILY SSF160467 4 96 1.83E-18 T 22-04-2016 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 SMART SM00796 3 224 1.1E-69 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 Pfam PF02682 Allophanate hydrolase subunit 1 4 219 8.2E-52 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 SUPERFAMILY SSF50891 91 247 1.48E-27 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 Gene3D G3DSA:2.40.100.10 91 254 3.2E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 PANTHER PTHR34698:SF2 118 271 3.8E-76 T 22-04-2016 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 PANTHER PTHR34698:SF2 1 101 3.8E-76 T 22-04-2016 TMO_RS05795 5c4fa36d389c3beeb27e30fc0f059f2a 291 Gene3D G3DSA:3.30.1360.40 4 80 9.7E-16 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 PANTHER PTHR12905:SF7 37 212 8.3E-26 T 22-04-2016 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 PANTHER PTHR12905:SF7 1 20 8.3E-26 T 22-04-2016 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 Pfam PF00149 Calcineurin-like phosphoesterase 2 197 1.8E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 36.683 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 PANTHER PTHR12905 37 212 8.3E-26 T 22-04-2016 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 PANTHER PTHR12905 1 20 8.3E-26 T 22-04-2016 TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 SUPERFAMILY SSF56300 1 255 1.38E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS17545 2ebacf746eabe2a993fc17d7d6129ca5 273 Gene3D G3DSA:3.60.21.10 3 249 1.7E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 Gene3D G3DSA:3.40.190.10 22 151 6.4E-58 T 22-04-2016 TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 PANTHER PTHR30429 7 259 3.2E-132 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 18 259 3.7E-78 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 Pfam PF03180 NLPA lipoprotein 24 259 4.9E-95 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 PIRSF PIRSF002854 2 259 1.4E-105 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS05115 b99cceeb16b98c2ef8b1903c885697e7 259 SUPERFAMILY SSF53850 23 259 1.29E-88 T 22-04-2016 TMO_RS14720 5052fd7eacc7a3a98c76108cc8ecb5ea 349 PANTHER PTHR30472:SF25 16 349 1.2E-137 T 22-04-2016 TMO_RS14720 5052fd7eacc7a3a98c76108cc8ecb5ea 349 PANTHER PTHR30472 16 349 1.2E-137 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS14720 5052fd7eacc7a3a98c76108cc8ecb5ea 349 Pfam PF01032 FecCD transport family 29 343 1.7E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS14720 5052fd7eacc7a3a98c76108cc8ecb5ea 349 SUPERFAMILY SSF81345 13 342 2.22E-77 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS14720 5052fd7eacc7a3a98c76108cc8ecb5ea 349 Gene3D G3DSA:1.10.3470.10 16 348 2.7E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS16990 fa8236eeea3c1664c76dad84aae2ce67 285 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 63 272 7.0E-67 T 22-04-2016 IPR023977 Conserved hypotheical protein CHP04052 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 PANTHER PTHR30508 4 481 0.0 T 22-04-2016 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 SUPERFAMILY SSF101960 35 80 4.58E-139 T 22-04-2016 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 SUPERFAMILY SSF101960 107 478 4.58E-139 T 22-04-2016 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 PANTHER PTHR30508:SF1 4 481 0.0 T 22-04-2016 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 14 472 1.2E-193 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 TMO_RS00550 da0d44031fd92d7607c0680fbf97129a 481 Pfam PF01458 Uncharacterized protein family (UPF0051) 219 452 1.6E-70 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 Pfam PF03100 CcmE 4 122 8.1E-41 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 PANTHER PTHR34128 1 137 2.9E-48 T 22-04-2016 TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 PANTHER PTHR34128:SF1 1 137 2.9E-48 T 22-04-2016 TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 SUPERFAMILY SSF82093 22 128 1.57E-36 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 Gene3D G3DSA:2.40.50.140 19 116 7.6E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS15525 612b93f28a8377a284ebafdf53584a46 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 132 27.679 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 SUPERFAMILY SSF57716 2 101 8.55E-36 T 22-04-2016 TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.722 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.5E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 Gene3D G3DSA:4.10.830.10 41 101 9.1E-30 T 22-04-2016 TMO_RS13190 45247f707e1d4773cb7f08f326f9e712 101 PANTHER PTHR19836 1 101 2.4E-50 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 PANTHER PTHR21262 6 718 0.0 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF55021 643 713 4.58E-8 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF13291 ACT domain 640 715 6.5E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 710 3.5E-220 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.30.70.260 641 705 2.7E-10 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF04607 Region found in RelA / SpoT proteins 236 345 5.3E-37 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF109604 6 192 4.08E-69 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF81301 182 390 2.62E-59 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF02824 TGS domain 387 445 7.2E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Pfam PF13328 HD domain 26 176 5.2E-50 T 22-04-2016 IPR003607 HD/PDEase domain TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SUPERFAMILY SSF81271 373 446 1.44E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SMART SM00471 41 153 3.8E-9 T 22-04-2016 IPR003607 HD/PDEase domain TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.30.460.10 197 326 3.2E-44 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 SMART SM00954 236 346 1.8E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 PANTHER PTHR21262:SF0 6 718 0.0 T 22-04-2016 TMO_RS08000 a1875c0e9f700b235cccfbdfe78bacc1 718 Gene3D G3DSA:3.10.20.30 385 447 3.4E-23 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 PANTHER PTHR24220 3 210 9.4E-76 T 22-04-2016 TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 SUPERFAMILY SSF52540 3 216 2.37E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 Pfam PF00005 ABC transporter 4 140 3.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 PANTHER PTHR24220:SF364 3 210 9.4E-76 T 22-04-2016 TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 SMART SM00382 13 189 1.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 ProSitePatterns PS00211 ABC transporters family signature. 113 127 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS12810 15082a761cccd32c1b29b11bf46c447e 282 Gene3D G3DSA:3.40.50.300 3 202 2.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 SUPERFAMILY SSF56112 5 311 7.66E-80 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 Gene3D G3DSA:3.90.1200.10 107 313 7.4E-65 T 22-04-2016 TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 PANTHER PTHR21064 8 290 4.2E-49 T 22-04-2016 TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 308 3.9E-110 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 Gene3D G3DSA:3.30.200.20 1 104 7.6E-39 T 22-04-2016 TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 Pfam PF01636 Phosphotransferase enzyme family 28 257 3.3E-34 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase TMO_RS14085 f86b8ab4fb27fb9db28fa5db8a72d694 321 Hamap MF_00301 Homoserine kinase [thrB]. 1 321 151.926 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 PANTHER PTHR10909 367 398 1.9E-154 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 PANTHER PTHR10909 1 348 1.9E-154 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 PANTHER PTHR10909:SF229 367 398 1.9E-154 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 PANTHER PTHR10909:SF229 1 348 1.9E-154 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 SUPERFAMILY SSF56645 3 244 7.2E-77 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 1.8E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:2.40.110.10 124 220 3.2E-38 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 121 1.9E-22 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:1.20.140.10 221 397 1.7E-31 T 22-04-2016 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 SUPERFAMILY SSF47203 231 398 7.03E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 6.1E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 TMO_RS03210 a923bd89acef41d8c9dd4f9e13009496 398 Gene3D G3DSA:1.10.540.10 1 121 1.9E-25 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS00520 79c21a5bc7d3c95d6ac7e409cdb4cfc1 59 PANTHER PTHR28524:SF3 35 59 5.8E-17 T 22-04-2016 TMO_RS00520 79c21a5bc7d3c95d6ac7e409cdb4cfc1 59 Pfam PF07896 Protein of unknown function (DUF1674) 23 59 1.1E-14 T 22-04-2016 IPR012875 Protein of unknown function DUF1674 TMO_RS00520 79c21a5bc7d3c95d6ac7e409cdb4cfc1 59 PANTHER PTHR28524 35 59 5.8E-17 T 22-04-2016 TMO_RS14305 12f9c1d12ecd8b78b18da249ae2f755a 463 PANTHER PTHR11895 4 463 4.4E-126 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS14305 12f9c1d12ecd8b78b18da249ae2f755a 463 Pfam PF01425 Amidase 26 451 1.4E-95 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS14305 12f9c1d12ecd8b78b18da249ae2f755a 463 SUPERFAMILY SSF75304 3 462 4.32E-124 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS14305 12f9c1d12ecd8b78b18da249ae2f755a 463 Gene3D G3DSA:3.90.1300.10 3 463 5.3E-124 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS07685 a6bc3c3ee0062235640dbc1710cea669 111 Pfam PF13466 STAS domain 17 93 9.7E-16 T 22-04-2016 IPR002645 STAS domain TMO_RS07685 a6bc3c3ee0062235640dbc1710cea669 111 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 2.1E-22 T 22-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TMO_RS07685 a6bc3c3ee0062235640dbc1710cea669 111 PANTHER PTHR33495 1 110 1.1E-24 T 22-04-2016 TMO_RS07685 a6bc3c3ee0062235640dbc1710cea669 111 Gene3D G3DSA:3.30.750.24 1 110 5.9E-28 T 22-04-2016 IPR002645 STAS domain TMO_RS07685 a6bc3c3ee0062235640dbc1710cea669 111 SUPERFAMILY SSF52091 1 108 7.06E-26 T 22-04-2016 IPR002645 STAS domain TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 SUPERFAMILY SSF53850 10 288 4.99E-55 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 PANTHER PTHR30177:SF12 11 288 2.5E-97 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 Gene3D G3DSA:3.40.190.120 118 224 6.0E-24 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 PANTHER PTHR30177 11 288 2.5E-97 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 Gene3D G3DSA:3.40.190.10 8 117 1.5E-53 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 Gene3D G3DSA:3.40.190.10 238 289 1.5E-53 T 22-04-2016 TMO_RS08370 3d9831bf0ff577c24643270eaf03bace 289 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 10 284 5.1E-54 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF56235 38 459 1.54E-143 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF04898 Glutamate synthase central domain 486 767 6.9E-94 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF01493 GXGXG motif 1269 1457 1.4E-79 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF51395 473 1228 1.05E-251 T 22-04-2016 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 SUPERFAMILY SSF69336 1243 1504 4.58E-93 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.60.20.10 38 462 1.7E-158 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.20.20.70 475 814 3.7E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:3.20.20.70 821 1224 5.0E-174 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF01645 Conserved region in glutamate synthase 829 1191 2.4E-156 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 PANTHER PTHR11938 29 1507 0.0 T 22-04-2016 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 PANTHER PTHR11938:SF1 29 1507 0.0 T 22-04-2016 TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Pfam PF00310 Glutamine amidotransferases class-II 38 457 7.8E-156 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain TMO_RS00955 00bab02398fbe1afffcbabadf63c6e64 1516 Gene3D G3DSA:2.160.20.60 1246 1502 7.7E-99 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 TMO_RS14945 fe5656b9c8d1eb8766354475bcb8de90 102 SUPERFAMILY SSF141091 1 100 3.14E-33 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 TMO_RS14945 fe5656b9c8d1eb8766354475bcb8de90 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 4.5E-36 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 TMO_RS14945 fe5656b9c8d1eb8766354475bcb8de90 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.872 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS14945 fe5656b9c8d1eb8766354475bcb8de90 102 PANTHER PTHR21349 1 100 6.9E-37 T 22-04-2016 TMO_RS14945 fe5656b9c8d1eb8766354475bcb8de90 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.8E-30 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 Pfam PF01322 Cytochrome C' 27 144 1.4E-33 T 22-04-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 PRINTS PR00608 Class II cytochrome C signature 110 133 6.7E-8 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 PRINTS PR00608 Class II cytochrome C signature 133 144 6.7E-8 T 22-04-2016 IPR015984 Cytochrome c prime, subgroup TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 SUPERFAMILY SSF47175 23 144 2.06E-34 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 Gene3D G3DSA:1.20.120.10 26 146 1.2E-35 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 TMO_RS01100 eb00907ea25b3ca2414a9687cd8b6f59 146 PIRSF PIRSF000027 7 146 3.9E-32 T 22-04-2016 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 Gene3D G3DSA:1.10.357.10 50 196 4.1E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 SUPERFAMILY SSF46689 2 73 1.08E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 PANTHER PTHR30055 2 195 2.4E-18 T 22-04-2016 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 3 16 1.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 47 1.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 48 4.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 SUPERFAMILY SSF48498 70 194 6.43E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS02665 f9771ceab9d625ae81a797cc780498d9 199 Gene3D G3DSA:1.10.10.60 2 49 3.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 Gene3D G3DSA:3.40.640.10 46 261 4.2E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 Pfam PF00155 Aminotransferase class I and II 28 364 9.6E-44 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 Gene3D G3DSA:3.90.1150.10 262 354 1.0E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 SUPERFAMILY SSF53383 15 371 2.82E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 PANTHER PTHR13693 8 374 9.6E-126 T 22-04-2016 TMO_RS02195 38e8e64058b1edb13cc0c87ca7c1d006 378 PANTHER PTHR13693:SF53 8 374 9.6E-126 T 22-04-2016 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 Pfam PF00919 Uncharacterized protein family UPF0004 10 96 1.8E-16 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 445 4.9E-99 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 Pfam PF04055 Radical SAM superfamily 167 339 5.1E-24 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 PANTHER PTHR11918:SF45 10 445 1.2E-115 T 22-04-2016 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 SMART SM00729 162 380 1.1E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 11 411 6.6E-128 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 SUPERFAMILY SSF102114 138 381 9.68E-56 T 22-04-2016 TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 PANTHER PTHR11918 10 445 1.2E-115 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 Gene3D G3DSA:3.80.30.20 162 381 2.7E-66 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS00865 a113c1b67edb1ef214178fc38dca2db2 446 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 166 186 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PANTHER PTHR34217:SF1 1 507 4.4E-197 T 22-04-2016 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 505 6.6E-76 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PANTHER PTHR34217 1 507 4.4E-197 T 22-04-2016 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PIRSF PIRSF006615 1 510 7.8E-167 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 390 407 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 301 317 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 157 177 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 254 273 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 344 363 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 458 476 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 274 293 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 413 434 3.9E-45 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 TMO_RS14140 b4fedbbe77dee8928fa398fa0f544b71 512 SUPERFAMILY SSF55486 1 507 1.36E-107 T 22-04-2016 TMO_RS16695 4a9f6e88a0b4eb323603b61450bf8b21 142 PANTHER PTHR34957 1 126 1.5E-26 T 22-04-2016 TMO_RS16695 4a9f6e88a0b4eb323603b61450bf8b21 142 SUPERFAMILY SSF54427 10 128 8.35E-28 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS16695 4a9f6e88a0b4eb323603b61450bf8b21 142 Pfam PF13474 SnoaL-like domain 19 124 1.9E-18 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain TMO_RS16695 4a9f6e88a0b4eb323603b61450bf8b21 142 Gene3D G3DSA:3.10.450.50 7 131 2.3E-31 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 Gene3D G3DSA:3.40.50.300 7 254 1.6E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 SUPERFAMILY SSF52540 8 252 3.43E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 PANTHER PTHR24220:SF347 9 258 6.2E-139 T 22-04-2016 TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 PIRSF PIRSF039085 4 258 5.1E-117 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 PANTHER PTHR24220 9 258 6.2E-139 T 22-04-2016 TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 SMART SM00382 32 230 7.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15550 9b80d7ff2f3a3fb0d1fc2a8937bb3ff0 258 Pfam PF00005 ABC transporter 24 182 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12735 6fee21aac319237cb455ea84f9e45adb 348 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 24 5.0E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS12735 6fee21aac319237cb455ea84f9e45adb 348 SUPERFAMILY SSF53850 126 273 8.45E-6 T 22-04-2016 TMO_RS12735 6fee21aac319237cb455ea84f9e45adb 348 PANTHER PTHR33376 1 347 4.8E-51 T 22-04-2016 TMO_RS12735 6fee21aac319237cb455ea84f9e45adb 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 320 1.5E-37 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS12735 6fee21aac319237cb455ea84f9e45adb 348 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 1.8E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00490 856 940 1.7E-19 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.30.2060.10 146 224 1.5E-15 T 22-04-2016 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF00271 Helicase conserved C-terminal domain 835 939 3.1E-18 T 22-04-2016 IPR001650 Helicase, C-terminal TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00487 630 820 3.8E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 163 1113 2.0E-303 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM00982 1040 1140 8.4E-42 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.40.50.300 830 993 2.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 PANTHER PTHR14025 418 1174 0.0 T 22-04-2016 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 383 501 3.99E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF141259 502 576 1.57E-20 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1180 27.885 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SMART SM01058 510 606 9.0E-43 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF143517 1032 1179 4.71E-40 T 22-04-2016 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF00270 DEAD/DEAH box helicase 638 794 1.0E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF02559 CarD-like/TRCF domain 511 603 2.0E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 PANTHER PTHR14025:SF21 418 1174 0.0 T 22-04-2016 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 555 814 8.57E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 812 1020 6.18E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 SUPERFAMILY SSF52540 13 359 1.13E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Pfam PF03461 TRCF domain 1043 1133 1.0E-24 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 TMO_RS08175 83eac53bd4b4e051297d262eb871f72b 1187 Gene3D G3DSA:3.40.50.300 618 816 4.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29190 68013574044ffce38ac527e7ee817548 346 SUPERFAMILY SSF53474 83 195 2.74E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS29190 68013574044ffce38ac527e7ee817548 346 Pfam PF05990 Alpha/beta hydrolase of unknown function (DUF900) 77 325 9.4E-34 T 22-04-2016 IPR010297 Protein of unknown function DUF900, hydrolase-like TMO_RS29190 68013574044ffce38ac527e7ee817548 346 Gene3D G3DSA:3.40.50.1820 85 226 1.2E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 509 4.9E-254 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Gene3D G3DSA:2.40.30.20 1 92 2.7E-40 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 SUPERFAMILY SSF50615 10 94 1.96E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 PANTHER PTHR15184 1 493 0.0 T 22-04-2016 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 502 6.8E-49 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 PIRSF PIRSF039088 1 510 9.2E-281 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 SUPERFAMILY SSF47917 380 508 7.06E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Gene3D G3DSA:1.20.150.20 380 508 1.5E-55 T 22-04-2016 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 PANTHER PTHR15184:SF3 1 493 0.0 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 91 2.0E-17 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 51.739 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Gene3D G3DSA:3.40.50.300 94 379 5.1E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 2.6E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS15055 63558b9b7ca2c12d148153e23a01abe7 510 SUPERFAMILY SSF52540 96 378 4.98E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 SUPERFAMILY SSF53756 1 434 1.52E-68 T 22-04-2016 TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 115 2.1E-7 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 PANTHER PTHR11926 1 429 1.2E-39 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 PANTHER PTHR11926:SF77 1 429 1.2E-39 T 22-04-2016 TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 Gene3D G3DSA:3.40.50.2000 264 415 1.0E-32 T 22-04-2016 TMO_RS13580 0dff6cca125ce6474a998a55ed21df97 436 Gene3D G3DSA:3.40.50.2000 3 263 1.4E-39 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 SUPERFAMILY SSF64518 1 386 5.75E-74 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PANTHER PTHR30244:SF1 297 386 9.9E-79 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PANTHER PTHR30244:SF1 2 245 9.9E-79 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 3.5E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 37 54 9.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 76 95 9.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PRINTS PR00207 Flagellin signature 111 134 9.4E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PANTHER PTHR30244 297 386 9.9E-79 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 PANTHER PTHR30244 2 245 9.9E-79 T 22-04-2016 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 Gene3D G3DSA:1.20.1330.10 240 343 9.4E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 Gene3D G3DSA:1.20.1330.10 55 140 9.4E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05430 40f79607cb280596ae7f023d9a4c510a 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 301 386 1.4E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 Pfam PF01546 Peptidase family M20/M25/M40 116 434 5.7E-28 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 Pfam PF07687 Peptidase dimerisation domain 220 334 3.8E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 Gene3D G3DSA:3.30.70.360 232 332 1.2E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 Gene3D G3DSA:3.40.630.10 378 438 1.2E-59 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 Gene3D G3DSA:3.40.630.10 36 231 1.2E-59 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 SUPERFAMILY SSF53187 354 438 2.74E-57 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 SUPERFAMILY SSF53187 24 222 2.74E-57 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 SUPERFAMILY SSF55031 223 332 4.49E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 PANTHER PTHR11014 22 441 3.6E-144 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 PANTHER PTHR11014:SF83 22 441 3.6E-144 T 22-04-2016 TMO_RS07840 76ab91bdae8bcc413ea4159abecb87af 444 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 38 423 1.6E-91 T 22-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 TMO_RS06165 e887683c20e279406d6e81b93308ed6d 121 SMART SM00448 2 115 5.2E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06165 e887683c20e279406d6e81b93308ed6d 121 Pfam PF00072 Response regulator receiver domain 5 113 4.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS06165 e887683c20e279406d6e81b93308ed6d 121 Gene3D G3DSA:3.40.50.2300 2 116 6.3E-35 T 22-04-2016 TMO_RS06165 e887683c20e279406d6e81b93308ed6d 121 PANTHER PTHR26402 2 112 4.7E-35 T 22-04-2016 TMO_RS06165 e887683c20e279406d6e81b93308ed6d 121 SUPERFAMILY SSF52172 1 116 2.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS09295 1c1f18351b341c5944cd902c2b242da3 384 Pfam PF03739 Predicted permease YjgP/YjgQ family 31 379 1.7E-63 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 TMO_RS09295 1c1f18351b341c5944cd902c2b242da3 384 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 27 380 2.0E-84 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 TMO_RS09295 1c1f18351b341c5944cd902c2b242da3 384 PANTHER PTHR33529 22 383 1.5E-51 T 22-04-2016 TMO_RS09295 1c1f18351b341c5944cd902c2b242da3 384 PANTHER PTHR33529:SF1 22 383 1.5E-51 T 22-04-2016 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 SUPERFAMILY SSF46785 4 112 8.18E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 Pfam PF03466 LysR substrate binding domain 91 279 1.0E-26 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 PANTHER PTHR30579:SF4 1 274 9.1E-70 T 22-04-2016 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:1.10.10.10 2 83 1.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:3.40.190.10 191 230 6.0E-7 T 22-04-2016 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 PANTHER PTHR30579 1 274 9.1E-70 T 22-04-2016 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 SUPERFAMILY SSF53850 92 279 1.06E-25 T 22-04-2016 TMO_RS11450 d037533d2c31b397870dd21d1a8f7ea9 281 Gene3D G3DSA:3.40.190.10 88 190 3.7E-17 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 SUPERFAMILY SSF58104 439 684 5.36E-59 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 SUPERFAMILY SSF58104 371 398 5.36E-59 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 Pfam PF02743 Cache domain 53 257 1.1E-13 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 SMART SM00283 433 687 3.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 PANTHER PTHR32089:SF40 195 378 7.4E-105 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 PANTHER PTHR32089:SF40 411 690 7.4E-105 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:3.30.450.20 171 316 1.5E-12 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 Gene3D G3DSA:1.10.287.950 452 655 2.9E-46 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 SMART SM00304 343 396 0.051 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 SMART SM00304 593 646 29.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 Pfam PF00672 HAMP domain 323 392 8.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 684 1.5E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 PANTHER PTHR32089 195 378 7.4E-105 T 22-04-2016 TMO_RS08210 cded179428ac2630478933c5220e3f0a 705 PANTHER PTHR32089 411 690 7.4E-105 T 22-04-2016 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 SUPERFAMILY SSF51395 2 439 2.61E-131 T 22-04-2016 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 PANTHER PTHR11938:SF1 2 439 2.2E-214 T 22-04-2016 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 Pfam PF01645 Conserved region in glutamate synthase 213 439 1.8E-86 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 Pfam PF04898 Glutamate synthase central domain 2 151 1.5E-47 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 PANTHER PTHR11938 2 439 2.2E-214 T 22-04-2016 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 Gene3D G3DSA:3.20.20.70 1 198 3.1E-47 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS18775 75ac031559c0aa1c0d68dc46f69b1969 439 Gene3D G3DSA:3.20.20.70 204 439 7.6E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF53218 182 326 4.19E-39 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF63882 1 181 9.03E-45 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 PANTHER PTHR10192 1 410 9.7E-127 T 22-04-2016 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:3.40.980.10 167 330 1.1E-55 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:2.40.340.10 338 405 1.0E-11 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:2.170.190.11 44 146 1.2E-24 T 22-04-2016 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 SUPERFAMILY SSF63867 335 409 6.41E-16 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 405 1.9E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:3.90.105.10 21 43 9.6E-11 T 22-04-2016 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Gene3D G3DSA:3.90.105.10 147 166 9.6E-11 T 22-04-2016 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 172 5.9E-31 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 SMART SM00852 185 322 2.4E-36 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS08855 9558a9f1da4864b957bdcdc5e9234134 411 Pfam PF00994 Probable molybdopterin binding domain 185 320 4.1E-24 T 22-04-2016 IPR001453 MoaB/Mog domain TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 PANTHER PTHR33154:SF9 1 91 1.1E-24 T 22-04-2016 TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 SUPERFAMILY SSF46785 5 91 1.16E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 SMART SM00418 13 91 1.4E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 Gene3D G3DSA:1.10.10.10 4 91 3.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 Pfam PF12840 Helix-turn-helix domain 14 71 1.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07465 23946ec4d03e4d631b270c3ab5be8a1e 97 PANTHER PTHR33154 1 91 1.1E-24 T 22-04-2016 TMO_RS02920 d5ef7f877fb5d19c8165a6999e54aa19 251 Pfam PF05138 Phenylacetic acid catabolic protein 81 245 6.0E-19 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 TMO_RS02920 d5ef7f877fb5d19c8165a6999e54aa19 251 PANTHER PTHR30458:SF0 19 242 3.4E-20 T 22-04-2016 TMO_RS02920 d5ef7f877fb5d19c8165a6999e54aa19 251 Gene3D G3DSA:1.20.1260.10 21 243 8.7E-25 T 22-04-2016 IPR012347 Ferritin-related TMO_RS02920 d5ef7f877fb5d19c8165a6999e54aa19 251 SUPERFAMILY SSF47240 28 243 9.6E-35 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS02920 d5ef7f877fb5d19c8165a6999e54aa19 251 PANTHER PTHR30458 19 242 3.4E-20 T 22-04-2016 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 235 1.5E-58 T 22-04-2016 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PANTHER PTHR24322:SF559 147 179 3.5E-66 T 22-04-2016 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PANTHER PTHR24322:SF559 7 131 3.5E-66 T 22-04-2016 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 Gene3D G3DSA:3.40.50.720 3 237 5.9E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 239 4.1E-110 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.1E-5 T 22-04-2016 TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 SUPERFAMILY SSF51735 3 238 1.36E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.3E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PANTHER PTHR24322 147 179 3.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00795 5042c88d9315007485ebf0a88a4c9f3e 241 PANTHER PTHR24322 7 131 3.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 SUPERFAMILY SSF52540 625 928 4.58E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Pfam PF00005 ABC transporter 631 867 3.8E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 PANTHER PTHR32282 9 954 0.0 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 SUPERFAMILY SSF52540 451 578 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 SUPERFAMILY SSF52540 12 213 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 701 827 1.5E-53 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.10.8.280 293 413 1.2E-39 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 486 604 8.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 10 60 8.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 828 949 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.40.50.300 620 676 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 13 932 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 100 138 1.9E-51 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 414 485 1.9E-51 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:1.20.1580.10 258 291 1.9E-51 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.30.1490.20 209 256 4.4E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Gene3D G3DSA:3.30.1490.20 139 162 4.4E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 Hamap MF_00205 UvrABC system protein A [uvrA]. 10 947 22.833 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 PANTHER PTHR32282:SF2 9 954 0.0 T 22-04-2016 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 ProSitePatterns PS00211 ABC transporters family signature. 837 851 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07825 1237a01f622d6f7d9f673ec4d8042b43 963 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS28915 b85aa4fee5a1efb7496acfd0baf5c0bd 273 Gene3D G3DSA:3.90.280.10 127 252 1.6E-4 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:2.30.120.10 333 406 2.3E-16 T 22-04-2016 TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 PANTHER PTHR34218 1 810 2.0E-249 T 22-04-2016 TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:3.60.20.10 257 332 4.7E-106 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:3.60.20.10 416 645 4.7E-106 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 PIRSF PIRSF001227 6 807 1.4E-191 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 SUPERFAMILY SSF56235 41 799 1.21E-225 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 PANTHER PTHR34218:SF2 1 810 2.0E-249 T 22-04-2016 TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 Pfam PF01804 Penicillin amidase 45 796 4.8E-229 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 TMO_RS08105 4cfef67f7b093ee656a5b3203c384e0e 814 Gene3D G3DSA:1.10.439.10 30 195 5.1E-61 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 TMO_RS09065 3ec0491669ab954b24e99ec62a7a476e 435 PANTHER PTHR33362 1 432 6.3E-84 T 22-04-2016 TMO_RS09065 3ec0491669ab954b24e99ec62a7a476e 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 14 423 3.7E-79 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS09065 3ec0491669ab954b24e99ec62a7a476e 435 PIRSF PIRSF006066 5 435 2.3E-81 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS09065 3ec0491669ab954b24e99ec62a7a476e 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 429 5.9E-86 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS03480 199ef5911192e496261a190e26ca06ad 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 20 219 9.6E-49 T 22-04-2016 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB TMO_RS03480 199ef5911192e496261a190e26ca06ad 225 Gene3D G3DSA:2.40.360.10 34 222 1.3E-33 T 22-04-2016 IPR023373 YmcC-like domain TMO_RS03480 199ef5911192e496261a190e26ca06ad 225 SUPERFAMILY SSF159270 32 221 8.24E-35 T 22-04-2016 IPR023373 YmcC-like domain TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 182 236 5.8E-18 T 22-04-2016 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 PANTHER PTHR30055:SF76 33 238 2.0E-35 T 22-04-2016 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 63 3.9E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 70 93 3.9E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 SUPERFAMILY SSF48498 115 230 2.31E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 Gene3D G3DSA:1.10.357.10 34 237 3.5E-58 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 PANTHER PTHR30055 33 238 2.0E-35 T 22-04-2016 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 50 95 1.6E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14605 d7712c15a66c0c7ddead42afa383e57d 239 SUPERFAMILY SSF46689 39 114 4.99E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS11260 8749144c4b5204b330012bee26c842e8 230 SUPERFAMILY SSF103515 130 221 3.92E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS11260 8749144c4b5204b330012bee26c842e8 230 Pfam PF05275 Copper resistance protein B precursor (CopB) 25 230 1.8E-95 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 Gene3D G3DSA:3.90.190.20 313 438 6.6E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 Gene3D G3DSA:3.40.1190.10 7 291 1.7E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 136 151 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 SUPERFAMILY SSF53623 7 271 5.1E-77 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 PIRSF PIRSF001563 1 442 2.6E-95 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 434 1.9E-97 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 PANTHER PTHR11136 7 445 1.9E-98 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 SUPERFAMILY SSF53244 314 437 1.21E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 TMO_RS16325 15298e9a72b6aa850692d749e1f4719a 445 Pfam PF08245 Mur ligase middle domain 47 200 3.3E-7 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 TIGRFAM TIGR00763 lon: endopeptidase La 11 769 1.7E-299 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PANTHER PTHR10046:SF43 11 774 0.0 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 1.4E-96 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 SMART SM00382 347 504 7.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 199 5.9E-42 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Gene3D G3DSA:1.10.8.60 500 582 7.6E-30 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Gene3D G3DSA:3.30.230.10 589 768 5.7E-74 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 SUPERFAMILY SSF88697 11 200 4.97E-50 T 22-04-2016 IPR015947 PUA-like domain TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Hamap MF_01973 Lon protease [lon]. 10 770 72.243 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 SMART SM00464 9 201 1.1E-81 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Gene3D G3DSA:3.40.50.300 309 499 9.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 1.6E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 2.8E-55 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 2.8E-55 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 2.8E-55 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 2.8E-55 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 2.8E-55 T 22-04-2016 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PIRSF PIRSF001174 1 772 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 SUPERFAMILY SSF52540 312 585 1.14E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 SUPERFAMILY SSF54211 593 768 2.62E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 PANTHER PTHR10046 11 774 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 TMO_RS09970 f1d09af82df57183da366c50b74f942e 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 TMO_RS15135 4c82a652171beccf7e11f25d4c9097a2 153 Pfam PF13801 Heavy-metal resistance 21 144 2.3E-12 T 22-04-2016 IPR025961 Heavy-metal resistance protein TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 SUPERFAMILY SSF50685 74 172 3.45E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 PANTHER PTHR34183 66 325 7.0E-73 T 22-04-2016 TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 87 177 2.8E-43 T 22-04-2016 IPR012997 Rare lipoprotein A TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 SUPERFAMILY SSF110997 249 319 7.32E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 Gene3D G3DSA:3.30.70.1070 249 317 1.1E-13 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 PANTHER PTHR34183:SF1 66 325 7.0E-73 T 22-04-2016 TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 Pfam PF03330 Lytic transglycolase 86 173 4.5E-23 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain TMO_RS08425 3f736b3b030f35f05ab0ffca3d7913c1 325 Pfam PF05036 Sporulation related domain 253 323 1.4E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 Pfam PF00108 Thiolase, N-terminal domain 5 124 3.2E-29 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 SUPERFAMILY SSF53901 1 124 1.9E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 Gene3D G3DSA:3.40.47.10 5 124 1.5E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 PANTHER PTHR18919:SF69 1 124 5.8E-52 T 22-04-2016 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 TMO_RS11900 cadc806505c71eb8e6e0351913843032 125 PANTHER PTHR18919 1 124 5.8E-52 T 22-04-2016 TMO_RS17050 c5bd500208a621d5c91cb8933ebb91b3 272 PANTHER PTHR30296 19 262 8.6E-106 T 22-04-2016 TMO_RS17050 c5bd500208a621d5c91cb8933ebb91b3 272 Pfam PF02754 Cysteine-rich domain 20 100 4.0E-14 T 22-04-2016 IPR004017 Cysteine-rich domain TMO_RS17050 c5bd500208a621d5c91cb8933ebb91b3 272 Pfam PF02754 Cysteine-rich domain 149 233 1.5E-11 T 22-04-2016 IPR004017 Cysteine-rich domain TMO_RS17050 c5bd500208a621d5c91cb8933ebb91b3 272 PANTHER PTHR30296:SF0 19 262 8.6E-106 T 22-04-2016 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 152 274 2.0E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 PANTHER PTHR10632:SF2 101 550 2.3E-174 T 22-04-2016 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 Gene3D G3DSA:3.50.50.60 152 265 9.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 Gene3D G3DSA:3.50.50.60 408 473 9.1E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 Pfam PF04273 Putative phosphatase (DUF442) 6 110 2.7E-34 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 Gene3D G3DSA:3.90.190.10 2 139 3.4E-47 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 6 135 2.9E-42 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 PANTHER PTHR10632 101 550 2.3E-174 T 22-04-2016 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 SUPERFAMILY SSF51905 347 474 7.67E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07455 67e45fdfc02ff1aeef1483313644f3eb 563 SUPERFAMILY SSF51905 151 250 7.67E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 SUPERFAMILY SSF50129 4 149 8.96E-32 T 22-04-2016 IPR011032 GroES-like TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 SUPERFAMILY SSF51735 111 269 4.31E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 Pfam PF00107 Zinc-binding dehydrogenase 151 267 6.4E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 PANTHER PTHR11695 15 325 2.2E-73 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 SMART SM00829 10 322 2.0E-24 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 312 328 5.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 159 5.4E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 Gene3D G3DSA:3.40.50.720 147 261 5.6E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.1E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS14600 bd5c7dc5be2b581dce4ee57a26929859 330 Gene3D G3DSA:3.90.180.10 15 146 1.3E-37 T 22-04-2016 IPR011032 GroES-like TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 Pfam PF01799 [2Fe-2S] binding domain 75 147 8.1E-34 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 61 4.6E-7 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 SUPERFAMILY SSF47741 86 155 5.23E-36 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 SUPERFAMILY SSF54292 3 80 1.97E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 Gene3D G3DSA:1.10.150.120 77 155 5.7E-40 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 PANTHER PTHR11908 1 149 1.2E-57 T 22-04-2016 TMO_RS05925 ba52642ec7482f6a254cead8739916cd 156 Gene3D G3DSA:3.10.20.30 4 76 4.3E-30 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 311 8.5E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 PIRSF PIRSF004532 1 320 5.0E-139 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 Gene3D G3DSA:3.30.540.10 174 316 1.9E-36 T 22-04-2016 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 Gene3D G3DSA:3.30.540.10 1 173 5.9E-65 T 22-04-2016 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 315 1.2E-113 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 PANTHER PTHR30447:SF0 1 316 1.3E-154 T 22-04-2016 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 PANTHER PTHR30447 1 316 1.3E-154 T 22-04-2016 TMO_RS09765 41c77c827ed710930da9d87efbc8f36c 320 SUPERFAMILY SSF56655 1 313 4.88E-106 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 SUPERFAMILY SSF53706 57 638 3.66E-121 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.40.50.740 62 166 6.0E-53 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.40.50.740 368 604 6.0E-53 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Pfam PF00384 Molybdopterin oxidoreductase 62 522 1.5E-50 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 PANTHER PTHR11615:SF19 56 780 7.6E-188 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 SUPERFAMILY SSF50692 630 768 3.16E-39 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Pfam PF01568 Molydopterin dinucleotide binding domain 636 759 1.7E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 PANTHER PTHR11615 56 780 7.6E-188 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:3.40.228.10 181 367 1.7E-45 T 22-04-2016 TMO_RS13375 2f934fd13c2e2a9d0d230b96c822cf04 801 Gene3D G3DSA:2.40.40.20 613 768 1.7E-50 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.40.50.980 4 115 1.5E-31 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.40.50.980 158 182 1.5E-31 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 PANTHER PTHR24096 4 523 8.0E-161 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.30.300.30 420 520 3.3E-29 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 SUPERFAMILY SSF56801 4 522 1.09E-155 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 510 1.3E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:3.40.50.980 183 336 7.5E-45 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Gene3D G3DSA:2.30.38.10 343 415 2.9E-29 T 22-04-2016 TMO_RS03540 204d1019c220f9d1bb7079ae980825e7 527 Pfam PF00501 AMP-binding enzyme 10 425 7.6E-96 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 PANTHER PTHR22777 1 430 2.3E-158 T 22-04-2016 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM01091 347 427 2.7E-29 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 SUPERFAMILY SSF56176 347 426 2.15E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF03471 Transporter associated domain 349 426 2.7E-22 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF00571 CBS domain 213 270 0.0023 T 22-04-2016 IPR000644 CBS domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF00571 CBS domain 282 332 3.6E-6 T 22-04-2016 IPR000644 CBS domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM00116 222 271 8.9 T 22-04-2016 IPR000644 CBS domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 SMART SM00116 284 332 2.3 T 22-04-2016 IPR000644 CBS domain TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Pfam PF01595 Domain of unknown function DUF21 6 198 2.6E-48 T 22-04-2016 IPR002550 Domain of unknown function DUF21 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 SUPERFAMILY SSF54631 201 334 1.39E-26 T 22-04-2016 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 PANTHER PTHR22777:SF8 1 430 2.3E-158 T 22-04-2016 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Gene3D G3DSA:3.10.580.10 199 324 2.8E-15 T 22-04-2016 TMO_RS07700 ab829c4b62dfa0b4b80df3493888cf91 437 Gene3D G3DSA:3.30.465.10 325 425 2.8E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS23955 9e5a6a80a8bb6d5925570ba8cc615482 148 Pfam PF00144 Beta-lactamase 11 139 5.0E-25 T 22-04-2016 IPR001466 Beta-lactamase-related TMO_RS23955 9e5a6a80a8bb6d5925570ba8cc615482 148 PANTHER PTHR22935 12 126 2.1E-25 T 22-04-2016 TMO_RS23955 9e5a6a80a8bb6d5925570ba8cc615482 148 SUPERFAMILY SSF56601 13 128 1.44E-27 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS23955 9e5a6a80a8bb6d5925570ba8cc615482 148 Gene3D G3DSA:3.40.710.10 13 127 1.9E-25 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 SUPERFAMILY SSF161098 84 271 9.68E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 Gene3D G3DSA:1.10.3720.10 81 287 2.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 287 1.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 65 4.3E-5 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 PANTHER PTHR30465:SF68 4 287 1.5E-117 T 22-04-2016 TMO_RS05200 ae72bd0dac40a43f2a6c547e53225ad4 289 PANTHER PTHR30465 4 287 1.5E-117 T 22-04-2016 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 23.084 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 SUPERFAMILY SSF82697 1 78 3.31E-29 T 22-04-2016 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 79 2.2E-30 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 6.0E-15 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 PANTHER PTHR34696 1 80 7.5E-33 T 22-04-2016 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 Gene3D G3DSA:3.30.1280.10 1 79 8.9E-35 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS11375 509661690e12eae3004b7d7ce830fa44 80 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 78 2.0E-33 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS07030 ad049ae6b84d7bf67ab6149d0b603463 223 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 45 208 5.3E-18 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component TMO_RS07030 ad049ae6b84d7bf67ab6149d0b603463 223 PANTHER PTHR36698:SF1 13 218 2.2E-13 T 22-04-2016 TMO_RS07030 ad049ae6b84d7bf67ab6149d0b603463 223 PANTHER PTHR36698 13 218 2.2E-13 T 22-04-2016 TMO_RS07030 ad049ae6b84d7bf67ab6149d0b603463 223 SUPERFAMILY SSF159594 43 215 3.92E-35 T 22-04-2016 TMO_RS07030 ad049ae6b84d7bf67ab6149d0b603463 223 Gene3D G3DSA:3.40.50.10610 40 216 3.5E-43 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component TMO_RS17850 4ac657af3658e2c44b53329129679788 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 297 17.223 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 PANTHER PTHR13767:SF2 4 297 7.7E-99 T 22-04-2016 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 243 295 2.2E-5 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 SUPERFAMILY SSF55120 10 239 1.75E-69 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 239 5.8E-14 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal TMO_RS17850 4ac657af3658e2c44b53329129679788 305 PANTHER PTHR13767 4 297 7.7E-99 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 5.4E-48 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 TMO_RS17850 4ac657af3658e2c44b53329129679788 305 Gene3D G3DSA:2.30.130.10 242 295 8.1E-4 T 22-04-2016 IPR015947 PUA-like domain TMO_RS17850 4ac657af3658e2c44b53329129679788 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 219 2.0E-63 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 Gene3D G3DSA:1.20.1560.10 36 335 7.2E-32 T 22-04-2016 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 Pfam PF00664 ABC transporter transmembrane region 45 296 1.5E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 SMART SM00382 375 568 5.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 Pfam PF00005 ABC transporter 368 513 2.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 PANTHER PTHR24222:SF0 26 602 7.4E-223 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 SUPERFAMILY SSF52540 340 573 7.73E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 35 575 9.9E-198 T 22-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 SUPERFAMILY SSF90123 35 337 5.76E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 PANTHER PTHR24222 26 602 7.4E-223 T 22-04-2016 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04830 021cdad32f7df1b283d3059add8c9f31 610 Gene3D G3DSA:3.40.50.300 348 573 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.40.50.20 3 130 3.3E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 SUPERFAMILY SSF56059 124 310 1.19E-56 T 22-04-2016 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 PANTHER PTHR21621 1 312 9.9E-121 T 22-04-2016 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 295 3.0E-73 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.30.1490.20 137 191 2.4E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Hamap MF_00162 Glutathione synthetase [gshB]. 1 313 161.574 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 SUPERFAMILY SSF52440 3 122 1.18E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 PANTHER PTHR21621:SF4 1 312 9.9E-121 T 22-04-2016 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Gene3D G3DSA:3.30.470.20 192 299 4.7E-48 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 120 3.5E-43 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 TMO_RS17440 a57b0c5a13cc28bcfbd45cce0d015530 313 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 311 5.2E-129 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 TMO_RS03770 fecc40b3ff739c27d4c1a4be5249c92a 125 SUPERFAMILY SSF52833 5 118 1.87E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS03770 fecc40b3ff739c27d4c1a4be5249c92a 125 PANTHER PTHR30041:SF3 4 115 5.8E-16 T 22-04-2016 TMO_RS03770 fecc40b3ff739c27d4c1a4be5249c92a 125 PANTHER PTHR30041 4 115 5.8E-16 T 22-04-2016 TMO_RS03770 fecc40b3ff739c27d4c1a4be5249c92a 125 Pfam PF03960 ArsC family 54 117 4.6E-6 T 22-04-2016 IPR006660 Arsenate reductase-like TMO_RS03770 fecc40b3ff739c27d4c1a4be5249c92a 125 Gene3D G3DSA:3.40.30.10 4 119 7.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 PANTHER PTHR33370 1 72 5.4E-47 T 22-04-2016 TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.5E-29 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 SUPERFAMILY SSF50249 1 71 4.36E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.365 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 SMART SM00316 4 72 1.1E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS05060 7adb0cadabfac3bd239dde96f850b669 72 Gene3D G3DSA:2.40.50.140 1 72 3.6E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:1.10.10.10 6 89 5.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 8.7E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:3.40.190.10 201 283 1.6E-13 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Pfam PF03466 LysR substrate binding domain 99 313 1.3E-11 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 PANTHER PTHR30118:SF4 1 318 3.2E-60 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 SUPERFAMILY SSF53850 93 313 1.56E-19 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 PANTHER PTHR30118 1 318 3.2E-60 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:3.40.190.10 93 176 2.0E-21 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 Gene3D G3DSA:3.40.190.10 290 317 2.0E-21 T 22-04-2016 TMO_RS16605 c52b13dd42c9d7a6ec92a85631e6c5ba 318 SUPERFAMILY SSF46785 8 87 2.67E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17600 cf8cabe03966257c961642e68592f1ff 322 Gene3D G3DSA:3.40.50.1820 10 320 3.2E-100 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17600 cf8cabe03966257c961642e68592f1ff 322 SUPERFAMILY SSF53474 42 320 5.79E-79 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17600 cf8cabe03966257c961642e68592f1ff 322 PANTHER PTHR23024:SF24 71 321 2.1E-89 T 22-04-2016 TMO_RS17600 cf8cabe03966257c961642e68592f1ff 322 PANTHER PTHR23024 71 321 2.1E-89 T 22-04-2016 TMO_RS17600 cf8cabe03966257c961642e68592f1ff 322 Pfam PF07859 alpha/beta hydrolase fold 90 296 1.0E-74 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 SMART SM00382 27 211 2.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 Pfam PF00005 ABC transporter 18 164 4.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 Gene3D G3DSA:3.40.50.300 3 231 5.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 SUPERFAMILY SSF52540 3 225 3.58E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 PANTHER PTHR24220 4 235 4.2E-74 T 22-04-2016 TMO_RS09355 2ca53cd00d6d73ca8ce3f88b3bbdf9c7 278 PANTHER PTHR24220:SF558 4 235 4.2E-74 T 22-04-2016 TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 SUPERFAMILY SSF54197 3 116 9.59E-32 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 PANTHER PTHR23089 5 114 1.5E-38 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 98 108 7.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 29 47 7.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 PRINTS PR00332 Histidine triad family signature 8 24 7.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 Pfam PF01230 HIT domain 14 112 8.5E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 Gene3D G3DSA:3.30.428.10 3 113 1.6E-33 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 PANTHER PTHR23089:SF2 5 114 1.5E-38 T 22-04-2016 TMO_RS16955 fbf279bfa3b8ae52b5b237276106624b 122 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 22-04-2016 IPR019808 Histidine triad, conserved site TMO_RS05135 d990bebca0b119810fd096c32dc31267 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 138 4.3E-34 T 22-04-2016 TMO_RS05135 d990bebca0b119810fd096c32dc31267 165 PANTHER PTHR10371 26 136 8.0E-31 T 22-04-2016 TMO_RS05135 d990bebca0b119810fd096c32dc31267 165 SUPERFAMILY SSF52833 22 140 1.79E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS09590 9c252cd0887e93bea75f8e0a271028be 233 Pfam PF10691 Protein of unknown function (DUF2497) 150 227 4.7E-25 T 22-04-2016 IPR019632 Protein of unknown function DUF2497 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 PANTHER PTHR30158 2 384 3.6E-109 T 22-04-2016 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 SUPERFAMILY SSF111369 64 307 3.01E-62 T 22-04-2016 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 302 6.1E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 383 4.9E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:2.40.50.100 76 109 2.9E-19 T 22-04-2016 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 Gene3D G3DSA:2.40.50.100 184 216 2.9E-19 T 22-04-2016 TMO_RS13445 ad84bf08e3501c4b95a78fc2539b1f2b 398 Pfam PF00529 HlyD membrane-fusion protein of T1SS 124 368 2.8E-6 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS29605 7bc94da481e23d634967883d79038259 322 Gene3D G3DSA:3.40.50.300 116 183 7.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29605 7bc94da481e23d634967883d79038259 322 SUPERFAMILY SSF53795 119 177 4.88E-11 T 22-04-2016 TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 SUPERFAMILY SSF52418 89 331 1.83E-49 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 Pfam PF00591 Glycosyl transferase family, a/b domain 110 260 5.2E-6 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 Gene3D G3DSA:3.40.1030.10 99 330 2.3E-32 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 Gene3D G3DSA:1.20.970.10 25 78 3.4E-15 T 22-04-2016 TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 Pfam PF02885 Glycosyl transferase family, helical bundle domain 27 78 1.9E-13 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain TMO_RS10830 c2fe7e50294d011414bcb0c685243429 333 SUPERFAMILY SSF47648 24 79 1.7E-12 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 Gene3D G3DSA:3.40.50.980 116 238 2.0E-10 T 22-04-2016 TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 PANTHER PTHR36932:SF1 5 336 4.9E-67 T 22-04-2016 TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 Pfam PF00501 AMP-binding enzyme 116 277 8.9E-12 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 PANTHER PTHR36932 5 336 4.9E-67 T 22-04-2016 TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 Gene3D G3DSA:3.30.300.30 315 400 5.4E-12 T 22-04-2016 TMO_RS15465 c70ff6d22ff263f745d0b7b7e163876f 413 SUPERFAMILY SSF56801 110 383 9.81E-34 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:3.30.1360.30 284 416 2.3E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 TMO_RS09220 350b3344368391f57723662a51b89808 608 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 560 1.5E-94 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 6.0E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 6.0E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 6.0E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 6.0E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 4 566 33.972 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 PANTHER PTHR22594 372 574 9.6E-211 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 PANTHER PTHR22594 2 304 9.6E-211 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS09220 350b3344368391f57723662a51b89808 608 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 586 3.3E-190 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 TMO_RS09220 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:3.30.930.10 417 586 4.5E-102 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:3.30.930.10 136 283 4.5E-102 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF55681 115 299 1.08E-98 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF55681 427 587 1.08E-98 T 22-04-2016 TMO_RS09220 350b3344368391f57723662a51b89808 608 Gene3D G3DSA:2.40.50.140 4 108 2.8E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS09220 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF55261 297 422 1.8E-36 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 TMO_RS09220 350b3344368391f57723662a51b89808 608 Pfam PF01336 OB-fold nucleic acid binding domain 21 102 2.5E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 TMO_RS09220 350b3344368391f57723662a51b89808 608 Pfam PF02938 GAD domain 315 406 6.9E-14 T 22-04-2016 IPR029351 GAD domain TMO_RS09220 350b3344368391f57723662a51b89808 608 SUPERFAMILY SSF50249 4 107 5.52E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS09220 350b3344368391f57723662a51b89808 608 PANTHER PTHR22594:SF5 372 574 9.6E-211 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 TMO_RS09220 350b3344368391f57723662a51b89808 608 PANTHER PTHR22594:SF5 2 304 9.6E-211 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 PANTHER PTHR31377 5 375 1.5E-141 T 22-04-2016 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 16 369 3.3E-104 T 22-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 PANTHER PTHR31377:SF0 5 375 1.5E-141 T 22-04-2016 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 9 370 4.3E-152 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 Hamap MF_01841 Agmatine deiminase [aguA]. 8 370 53.543 T 22-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 SUPERFAMILY SSF55909 7 370 1.39E-119 T 22-04-2016 TMO_RS06790 3514d93e9e60ae9bab2699382328d05d 376 Gene3D G3DSA:3.75.10.10 7 370 1.4E-124 T 22-04-2016 TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 Gene3D G3DSA:3.30.420.10 262 441 1.1E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 Pfam PF00929 Exonuclease 272 432 6.4E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 SUPERFAMILY SSF53098 264 446 1.2E-46 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 Gene3D G3DSA:3.30.450.20 124 166 8.4E-4 T 22-04-2016 TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 SMART SM00479 268 441 1.5E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_RS04115 212de148d29558fc0f7b2f7aac14bb19 469 PANTHER PTHR30231 231 452 8.3E-42 T 22-04-2016 TMO_RS12250 30d6336cb0c11e8147bca5420e577af3 445 PIRSF PIRSF006066 7 445 2.2E-73 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS12250 30d6336cb0c11e8147bca5420e577af3 445 PANTHER PTHR33362 1 444 1.6E-118 T 22-04-2016 TMO_RS12250 30d6336cb0c11e8147bca5420e577af3 445 PANTHER PTHR33362:SF5 1 444 1.6E-118 T 22-04-2016 TMO_RS12250 30d6336cb0c11e8147bca5420e577af3 445 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 435 1.6E-73 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 Gene3D G3DSA:1.10.1660.10 69 147 2.8E-14 T 22-04-2016 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 PANTHER PTHR30204:SF0 7 145 5.3E-64 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 27 5.9E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 50 70 5.9E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 27 40 5.9E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 PANTHER PTHR30204 7 145 5.3E-64 T 22-04-2016 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 Gene3D G3DSA:1.10.1660.10 13 68 9.3E-20 T 22-04-2016 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 15 153 4.6E-63 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 SMART SM00422 15 83 3.0E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 Pfam PF09278 MerR, DNA binding 57 122 1.7E-15 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 SUPERFAMILY SSF46955 15 137 1.32E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 Pfam PF00376 MerR family regulatory protein 16 52 7.8E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS17705 b3c27269e2c41a36ad2b037572c7243f 155 ProSitePatterns PS00552 MerR-type HTH domain signature. 18 40 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 PANTHER PTHR10909:SF299 121 180 6.9E-29 T 22-04-2016 TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 PANTHER PTHR10909 121 180 6.9E-29 T 22-04-2016 TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 SUPERFAMILY SSF52402 21 179 2.44E-49 T 22-04-2016 TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 Gene3D G3DSA:3.40.50.620 19 179 8.9E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 Pfam PF01012 Electron transfer flavoprotein domain 21 176 9.6E-38 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS21395 87f390b4aa7b79b0ef94719d7d8eedd5 180 SMART SM00893 21 180 5.7E-44 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 185 1.5E-55 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 186 33.306 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 PANTHER PTHR30042:SF2 1 192 6.1E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 PIRSF PIRSF001296 1 189 9.1E-68 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 Pfam PF02669 K+-transporting ATPase, c chain 6 184 2.8E-64 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 TMO_RS02305 e9aea2a1e4b32b6a93b815ee7eb7fcf7 192 PANTHER PTHR30042 1 192 6.1E-74 T 22-04-2016 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 PANTHER PTHR11986:SF80 1 438 5.3E-259 T 22-04-2016 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 PANTHER PTHR11986 1 438 5.3E-259 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 Pfam PF00202 Aminotransferase class-III 20 436 2.5E-117 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 Gene3D G3DSA:3.90.1150.10 342 439 4.6E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 Gene3D G3DSA:3.90.1150.10 9 62 4.6E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 Gene3D G3DSA:3.40.640.10 64 340 5.9E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 SUPERFAMILY SSF53383 6 438 5.42E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS04760 d2150977a3a71388235a4071e3c7a2ac 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 PANTHER PTHR30128 58 170 3.9E-51 T 22-04-2016 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 SUPERFAMILY SSF103088 60 168 1.57E-34 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 98 113 5.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 68 90 5.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 PRINTS PR01021 OMPA domain signature 113 129 5.6E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 Gene3D G3DSA:3.30.1330.60 60 168 3.2E-34 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 Pfam PF00691 OmpA family 67 162 3.5E-24 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 167 7.5E-43 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 TMO_RS04570 bb2501a269c39d8b63685d3023e5755e 170 PANTHER PTHR30128:SF18 58 170 3.9E-51 T 22-04-2016 TMO_RS29300 92e444583638ef2043225c6ae7b3f23a 414 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 45 257 4.1E-16 T 22-04-2016 IPR018642 Protein of unknown function DUF2066 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 Gene3D G3DSA:1.10.630.10 17 405 2.3E-68 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 Pfam PF00067 Cytochrome P450 220 362 7.9E-22 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 352 363 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 136 152 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 89 100 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 343 352 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 317 332 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 272 283 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PRINTS PR00359 B-class P450 signature 289 316 4.2E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 PANTHER PTHR24286 68 410 2.3E-26 T 22-04-2016 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 345 354 - T 22-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 TMO_RS06720 2ed969047ae3633ca94cfcec69b6f795 418 SUPERFAMILY SSF48264 25 404 5.76E-59 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 9.7E-28 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 9.7E-28 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 9.7E-28 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 9.7E-28 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.7E-28 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 311 2.8E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PANTHER PTHR22912 5 460 1.2E-128 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 SUPERFAMILY SSF51905 1 382 5.18E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PIRSF PIRSF000350 1 463 3.5E-90 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.7E-60 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Gene3D G3DSA:3.50.50.60 254 337 1.7E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Gene3D G3DSA:3.50.50.60 3 152 1.6E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Gene3D G3DSA:3.50.50.60 153 253 9.5E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 SUPERFAMILY SSF55424 346 461 5.5E-31 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 PANTHER PTHR22912:SF29 5 460 1.2E-128 T 22-04-2016 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 455 1.4E-24 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS13710 5b6bc5766dafd27045b47e4dd8eb0696 480 Gene3D G3DSA:3.30.390.30 343 459 3.0E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 SMART SM00924 54 157 2.0E-29 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF01769 Divalent cation transporter 341 462 9.9E-26 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 PANTHER PTHR41394:SF1 246 456 1.8E-44 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:3.10.580.10 150 282 8.1E-20 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 TIGRFAM TIGR00400 mgtE: magnesium transporter 29 468 1.2E-92 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF03448 MgtE intracellular N domain 54 154 3.5E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF54631 156 289 5.24E-30 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:1.25.60.10 28 149 8.7E-25 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 PANTHER PTHR41394 246 456 1.8E-44 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF161093 299 468 3.4E-46 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Pfam PF00571 CBS domain 222 276 1.4E-8 T 22-04-2016 IPR000644 CBS domain TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 SUPERFAMILY SSF158791 28 154 1.31E-26 T 22-04-2016 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 Gene3D G3DSA:1.10.357.20 299 468 7.8E-48 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 TMO_RS13050 e4fa9cc19f62225a24f4d95016a3b678 469 SMART SM00116 228 276 1.5E-4 T 22-04-2016 IPR000644 CBS domain TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 PANTHER PTHR30329:SF5 286 424 2.5E-26 T 22-04-2016 TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 SUPERFAMILY SSF57997 75 267 3.27E-6 T 22-04-2016 TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 SUPERFAMILY SSF103088 295 420 7.32E-28 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 PANTHER PTHR30329 286 424 2.5E-26 T 22-04-2016 TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 Pfam PF00691 OmpA family 309 415 8.3E-18 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04420 ed3bc19f341724036a113d229a743d50 424 Gene3D G3DSA:3.30.1330.60 296 422 3.0E-32 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS12405 67850420caab7d029fb2425ce0c0a9ca 299 Pfam PF01545 Cation efflux family 10 209 6.5E-29 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS12405 67850420caab7d029fb2425ce0c0a9ca 299 Gene3D G3DSA:1.20.1510.10 8 208 2.5E-19 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS12405 67850420caab7d029fb2425ce0c0a9ca 299 PANTHER PTHR11562 8 232 7.2E-13 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS12405 67850420caab7d029fb2425ce0c0a9ca 299 SUPERFAMILY SSF161111 6 209 3.66E-27 T 22-04-2016 TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 PANTHER PTHR34990 40 328 1.1E-116 T 22-04-2016 TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 56 269 1.3E-10 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 SUPERFAMILY SSF56300 53 174 8.36E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 SUPERFAMILY SSF56300 230 296 8.36E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 Gene3D G3DSA:3.60.21.10 53 188 6.0E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 Gene3D G3DSA:3.60.21.10 237 288 6.0E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS08225 2093f4131691d36069f3a15d5c4d26eb 330 PANTHER PTHR34990:SF2 40 328 1.1E-116 T 22-04-2016 TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 Gene3D G3DSA:3.40.50.300 12 262 2.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 244 266 4.4E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 PANTHER PTHR24220 15 266 1.1E-80 T 22-04-2016 TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 SMART SM00382 38 244 0.0096 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 SUPERFAMILY SSF52540 14 265 1.11E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 PANTHER PTHR24220:SF358 15 266 1.1E-80 T 22-04-2016 TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01690 ab3a2fb455142a2988312dab5f6f9a84 269 Pfam PF00005 ABC transporter 29 190 3.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS17410 f6741eaa7206a78ed57b8fbee57f08d6 510 Gene3D G3DSA:3.40.720.10 3 274 1.8E-45 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 TMO_RS17410 f6741eaa7206a78ed57b8fbee57f08d6 510 SUPERFAMILY SSF53649 4 426 9.81E-46 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 TMO_RS17410 f6741eaa7206a78ed57b8fbee57f08d6 510 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 312 7.0E-35 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 Gene3D G3DSA:3.30.70.260 196 277 6.5E-22 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 Gene3D G3DSA:3.40.190.10 93 171 7.1E-26 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 PANTHER PTHR21022 9 277 1.3E-81 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 Gene3D G3DSA:3.40.190.10 7 92 4.7E-27 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 SUPERFAMILY SSF55021 178 276 1.37E-20 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 PIRSF PIRSF001500 4 278 2.9E-61 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 Pfam PF00800 Prephenate dehydratase 9 185 3.9E-52 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 SUPERFAMILY SSF53850 9 190 7.27E-57 T 22-04-2016 TMO_RS16085 49a2bbc09f6a01af4d844ac3007015ab 289 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 159 181 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 TMO_RS14125 e874946fd9cff76cc8c743e047a2252b 74 Pfam PF01206 Sulfurtransferase TusA 2 70 4.4E-22 T 22-04-2016 IPR001455 TusA-like domain TMO_RS14125 e874946fd9cff76cc8c743e047a2252b 74 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 3 27 - T 22-04-2016 IPR001455 TusA-like domain TMO_RS14125 e874946fd9cff76cc8c743e047a2252b 74 PANTHER PTHR33279 1 73 5.1E-19 T 22-04-2016 TMO_RS14125 e874946fd9cff76cc8c743e047a2252b 74 Gene3D G3DSA:3.30.110.40 2 71 8.9E-26 T 22-04-2016 IPR001455 TusA-like domain TMO_RS14125 e874946fd9cff76cc8c743e047a2252b 74 SUPERFAMILY SSF64307 2 71 7.33E-23 T 22-04-2016 IPR001455 TusA-like domain TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 1.4E-56 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 PANTHER PTHR33797 1 136 2.0E-64 T 22-04-2016 TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 Pfam PF02566 OsmC-like protein 38 134 3.9E-19 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 PANTHER PTHR33797:SF2 1 136 2.0E-64 T 22-04-2016 TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 SUPERFAMILY SSF82784 1 136 2.09E-44 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 Gene3D G3DSA:3.30.300.20 45 136 1.2E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS07885 1f1ff977c299556abeb5171d8531dd22 137 Gene3D G3DSA:2.20.25.10 1 44 6.5E-21 T 22-04-2016 TMO_RS17695 eb505e1117a811e732dddd23255bb38f 158 Pfam PF00582 Universal stress protein family 9 145 1.7E-16 T 22-04-2016 IPR006016 UspA GO:0006950 TMO_RS17695 eb505e1117a811e732dddd23255bb38f 158 SUPERFAMILY SSF52402 9 147 2.16E-19 T 22-04-2016 TMO_RS17695 eb505e1117a811e732dddd23255bb38f 158 Gene3D G3DSA:3.40.50.620 9 146 9.1E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 PANTHER PTHR10887 927 1135 3.1E-56 T 22-04-2016 TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 PANTHER PTHR10887 725 872 3.1E-56 T 22-04-2016 TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 998 1135 1.8E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Pfam PF13086 AAA domain 764 851 8.5E-15 T 22-04-2016 TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 760 761 3.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 812 874 3.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 932 963 3.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Gene3D G3DSA:3.40.50.300 612 722 3.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF52540 1017 1165 1.82E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF52540 648 875 1.82E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF52540 932 986 1.82E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 SUPERFAMILY SSF56112 37 229 3.84E-9 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS10945 214ef016a99428429db5ce1f6e3135cb 1191 Pfam PF13087 AAA domain 933 1135 1.0E-40 T 22-04-2016 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 PANTHER PTHR23091 117 287 1.2E-26 T 22-04-2016 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.1490.20 367 435 2.2E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 SUPERFAMILY SSF56059 524 602 2.3E-31 T 22-04-2016 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 SUPERFAMILY SSF56059 357 466 2.3E-31 T 22-04-2016 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 PANTHER PTHR23091:SF122 117 287 1.2E-26 T 22-04-2016 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.470.20 436 461 5.3E-18 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.470.20 516 606 5.3E-18 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.30.470.20 347 364 5.3E-18 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Pfam PF08443 RimK-like ATP-grasp domain 356 458 2.7E-7 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Gene3D G3DSA:3.40.630.30 143 272 1.9E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 SUPERFAMILY SSF55729 96 278 8.37E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 63 606 8.1E-263 T 22-04-2016 IPR017534 GNAT-acetyltransferase TMO_RS12600 a84f6381fd694cfbebc153b56d87d29e 619 Pfam PF00583 Acetyltransferase (GNAT) family 194 273 7.4E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS02115 b160f2211bf4fc52a8902c2464422f9c 341 Gene3D G3DSA:3.20.20.100 1 317 3.3E-91 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS02115 b160f2211bf4fc52a8902c2464422f9c 341 PANTHER PTHR11732 1 235 1.2E-115 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS02115 b160f2211bf4fc52a8902c2464422f9c 341 PANTHER PTHR11732 255 316 1.2E-115 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS02115 b160f2211bf4fc52a8902c2464422f9c 341 SUPERFAMILY SSF51430 1 316 7.6E-96 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS02115 b160f2211bf4fc52a8902c2464422f9c 341 Pfam PF00248 Aldo/keto reductase family 16 316 4.8E-66 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 SUPERFAMILY SSF53254 1 152 7.07E-25 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 SMART SM00855 3 107 2.8E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 PANTHER PTHR23029 3 77 4.8E-17 T 22-04-2016 TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 67 2.8E-10 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 PANTHER PTHR23029:SF49 3 77 4.8E-17 T 22-04-2016 TMO_RS16715 a1cc49d7ca46e24cd6344cbdbd144518 172 Gene3D G3DSA:3.40.50.1240 1 166 7.1E-47 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS01875 030334434975db13994ab0eb256cad82 155 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 149 3.6E-14 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 TMO_RS15965 9527aa77a4f281e504b24ecda379160a 328 Gene3D G3DSA:3.20.20.70 3 256 1.7E-42 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS15965 9527aa77a4f281e504b24ecda379160a 328 PANTHER PTHR10277:SF3 2 243 9.5E-33 T 22-04-2016 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 TMO_RS15965 9527aa77a4f281e504b24ecda379160a 328 PANTHER PTHR10277 2 243 9.5E-33 T 22-04-2016 TMO_RS15965 9527aa77a4f281e504b24ecda379160a 328 SUPERFAMILY SSF51569 3 248 4.94E-46 T 22-04-2016 TMO_RS15965 9527aa77a4f281e504b24ecda379160a 328 Pfam PF00682 HMGL-like 3 245 4.5E-29 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS08245 c5779d9b633aed44fdcec91cfc0411e1 287 SUPERFAMILY SSF51621 2 283 1.02E-67 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS08245 c5779d9b633aed44fdcec91cfc0411e1 287 Gene3D G3DSA:3.20.20.60 2 283 8.4E-68 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS08245 c5779d9b633aed44fdcec91cfc0411e1 287 PANTHER PTHR21631 4 179 1.7E-54 T 22-04-2016 TMO_RS08245 c5779d9b633aed44fdcec91cfc0411e1 287 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 222 3.2E-48 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 Gene3D G3DSA:3.40.190.10 263 329 4.9E-40 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 Gene3D G3DSA:3.40.190.10 30 123 4.9E-40 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 SUPERFAMILY SSF53850 30 329 6.37E-57 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 Gene3D G3DSA:3.40.190.10 132 262 1.5E-27 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 329 2.8E-73 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 PANTHER PTHR30024 10 330 4.5E-40 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 PANTHER PTHR30024:SF13 10 330 4.5E-40 T 22-04-2016 TMO_RS16030 65b83db4a588e3a3438bcca67d4e1461 330 Pfam PF16868 NMT1-like family 34 329 1.1E-68 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 SMART SM00387 1 139 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 PANTHER PTHR10169 1 156 1.2E-65 T 22-04-2016 TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1 135 2.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 SMART SM00433 1 156 0.0013 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 SUPERFAMILY SSF55874 1 156 3.67E-52 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 PRINTS PR00418 DNA topoisomerase II family signature 76 90 1.5E-12 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 PRINTS PR00418 DNA topoisomerase II family signature 33 46 1.5E-12 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS23790 e733a494a09a45a88aa05c6d9014e252 156 Gene3D G3DSA:3.30.565.10 1 156 1.1E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 267 5.2E-6 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 PANTHER PTHR24220:SF554 19 268 5.1E-130 T 22-04-2016 TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 Gene3D G3DSA:3.40.50.300 15 265 3.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 PANTHER PTHR24220 19 268 5.1E-130 T 22-04-2016 TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 Pfam PF00005 ABC transporter 34 190 8.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 SUPERFAMILY SSF52540 11 265 7.42E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 16 267 2.7E-114 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 SMART SM00382 42 240 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 PIRSF PIRSF037116 5 269 3.3E-139 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK TMO_RS10555 316fec99c740c5eedefff3fa87f4254a 269 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS29545 cb23a330ba0c3460f2cdcfe92ae51f64 383 Gene3D G3DSA:3.30.70.1230 155 337 2.5E-22 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS29545 cb23a330ba0c3460f2cdcfe92ae51f64 383 PANTHER PTHR11920:SF341 150 337 4.7E-15 T 22-04-2016 TMO_RS29545 cb23a330ba0c3460f2cdcfe92ae51f64 383 SUPERFAMILY SSF55073 150 337 1.88E-35 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29545 cb23a330ba0c3460f2cdcfe92ae51f64 383 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 156 335 1.4E-14 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS29545 cb23a330ba0c3460f2cdcfe92ae51f64 383 PANTHER PTHR11920 150 337 4.7E-15 T 22-04-2016 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 ProSitePatterns PS00211 ABC transporters family signature. 858 872 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 SUPERFAMILY SSF52540 715 951 5.93E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 Gene3D G3DSA:3.40.50.300 722 946 3.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 SUPERFAMILY SSF90123 404 685 2.09E-23 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 Pfam PF00005 ABC transporter 738 886 2.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 Pfam PF00664 ABC transporter transmembrane region 407 645 6.9E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 Gene3D G3DSA:1.20.1560.10 405 683 4.3E-21 T 22-04-2016 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 SMART SM00382 747 936 6.6E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 PANTHER PTHR24221:SF161 206 953 2.1E-112 T 22-04-2016 TMO_RS07300 f95671bae09265ca2ab3a8365b367e32 955 PANTHER PTHR24221 206 953 2.1E-112 T 22-04-2016 TMO_RS16840 4940397b05cf73f40c3ef61bf0c404a5 487 Pfam PF00324 Amino acid permease 30 433 1.7E-18 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 TMO_RS16840 4940397b05cf73f40c3ef61bf0c404a5 487 PANTHER PTHR11785 65 472 3.3E-26 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 TMO_RS16840 4940397b05cf73f40c3ef61bf0c404a5 487 PIRSF PIRSF006060 17 482 1.1E-45 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 TMO_RS16840 4940397b05cf73f40c3ef61bf0c404a5 487 PANTHER PTHR11785:SF415 65 472 3.3E-26 T 22-04-2016 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 Gene3D G3DSA:3.40.50.2300 21 106 2.0E-14 T 22-04-2016 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 Gene3D G3DSA:3.40.50.2300 122 222 4.2E-39 T 22-04-2016 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 126 215 7.6E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 248 581 2.1E-136 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 125 208 1.2E-33 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 SUPERFAMILY SSF52794 20 105 7.06E-15 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 SUPERFAMILY SSF52794 123 222 3.31E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 PANTHER PTHR30505:SF0 19 580 5.5E-233 T 22-04-2016 TMO_RS02165 7a2e94e743035e34b37d23cbdbebc2e5 593 PANTHER PTHR30505 19 580 5.5E-233 T 22-04-2016 TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 SUPERFAMILY SSF52833 632 733 1.99E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 Gene3D G3DSA:3.40.30.10 595 647 1.7E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 PANTHER PTHR32234:SF3 72 277 8.4E-114 T 22-04-2016 TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 PANTHER PTHR32234:SF3 295 740 8.4E-114 T 22-04-2016 TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 Pfam PF11412 Disulphide bond corrector protein DsbC 66 182 4.6E-19 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 PANTHER PTHR32234 72 277 8.4E-114 T 22-04-2016 TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 PANTHER PTHR32234 295 740 8.4E-114 T 22-04-2016 TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 Gene3D G3DSA:3.40.30.10 648 736 1.6E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14105 ea2e53fafd84a2e69a63a51f9c8ab341 741 Pfam PF13899 Thioredoxin-like 638 711 8.2E-10 T 22-04-2016 TMO_RS16195 55571b7ebc9077cdfe90c1cdb3eb2103 158 Pfam PF02566 OsmC-like protein 53 150 5.1E-18 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS16195 55571b7ebc9077cdfe90c1cdb3eb2103 158 Gene3D G3DSA:3.30.300.20 5 151 7.1E-58 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS16195 55571b7ebc9077cdfe90c1cdb3eb2103 158 SUPERFAMILY SSF82784 6 150 3.01E-46 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 Pfam PF00561 alpha/beta hydrolase fold 32 157 1.3E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 Gene3D G3DSA:3.40.50.1820 8 294 1.4E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 106 119 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 271 293 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 PRINTS PR00412 Epoxide hydrolase signature 38 56 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 PANTHER PTHR10992 9 296 3.1E-64 T 22-04-2016 TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 SUPERFAMILY SSF53474 8 295 1.49E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS08145 efa5b96207ff4b7c94d2667e08c897df 296 PANTHER PTHR10992:SF778 9 296 3.1E-64 T 22-04-2016 TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 Pfam PF00005 ABC transporter 21 167 1.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 PANTHER PTHR24220 3 219 3.0E-86 T 22-04-2016 TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 SMART SM00382 30 216 2.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 PANTHER PTHR24220:SF430 3 219 3.0E-86 T 22-04-2016 TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 SUPERFAMILY SSF52540 1 220 1.65E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 Gene3D G3DSA:3.40.50.300 1 220 3.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16110 c4f5ec93287d011dbe257f06ad42b85c 229 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 SUPERFAMILY SSF46689 1 72 3.85E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 PANTHER PTHR30055 1 188 8.6E-39 T 22-04-2016 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 9.8E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 Gene3D G3DSA:1.10.10.60 1 65 5.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 SUPERFAMILY SSF48498 80 187 1.5E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 PANTHER PTHR30055:SF89 1 188 8.6E-39 T 22-04-2016 TMO_RS05240 c1a9465111e1d0062d6d448441428026 208 Gene3D G3DSA:1.10.357.10 74 188 4.6E-17 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 22 320 9.2E-131 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 Gene3D G3DSA:3.40.50.1100 53 149 3.9E-37 T 22-04-2016 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 SUPERFAMILY SSF53686 15 320 8.64E-101 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 22 320 1.4E-134 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 PANTHER PTHR10314:SF110 13 324 2.5E-165 T 22-04-2016 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 PANTHER PTHR10314 13 324 2.5E-165 T 22-04-2016 TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 308 7.0E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS17905 e91118206673a782cb48fe2b0345ea93 324 Gene3D G3DSA:3.40.50.1100 150 321 6.9E-77 T 22-04-2016 TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 PANTHER PTHR10366:SF460 2 257 6.3E-56 T 22-04-2016 TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 PANTHER PTHR10366:SF460 279 317 6.3E-56 T 22-04-2016 TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 5 249 5.0E-34 T 22-04-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 Gene3D G3DSA:3.40.50.720 1 316 4.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 SUPERFAMILY SSF51735 1 319 2.9E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 PANTHER PTHR10366 2 257 6.3E-56 T 22-04-2016 TMO_RS07285 2485bafd9b982558cae3bb8fe900bc4b 324 PANTHER PTHR10366 279 317 6.3E-56 T 22-04-2016 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 161 3.6E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 PANTHER PTHR32552 1 719 1.1E-39 T 22-04-2016 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Gene3D G3DSA:2.170.130.10 31 163 8.3E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Gene3D G3DSA:2.40.170.20 164 719 1.2E-67 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 Pfam PF00593 TonB dependent receptor 437 718 1.5E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 702 719 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site TMO_RS11530 1ecd2cbe90bcdc13f80df5195ea5cfea 719 SUPERFAMILY SSF56935 31 719 3.36E-93 T 22-04-2016 TMO_RS03435 4986cdef57f22932431a86e635c98657 331 Gene3D G3DSA:3.40.50.2300 134 290 1.7E-44 T 22-04-2016 TMO_RS03435 4986cdef57f22932431a86e635c98657 331 Pfam PF02608 Basic membrane protein 56 265 1.3E-37 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 TMO_RS03435 4986cdef57f22932431a86e635c98657 331 PANTHER PTHR34296 8 320 1.3E-55 T 22-04-2016 TMO_RS03435 4986cdef57f22932431a86e635c98657 331 SUPERFAMILY SSF53822 41 229 9.42E-6 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 32 286 7.8E-84 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 PANTHER PTHR30406 1 294 7.5E-131 T 22-04-2016 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 285 2.4E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 30 287 2.8E-113 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 SUPERFAMILY SSF161098 27 278 4.97E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 PANTHER PTHR30406:SF1 1 294 7.5E-131 T 22-04-2016 TMO_RS07850 560276a6f73abb5a512315d7a07e78f3 298 Gene3D G3DSA:1.10.3720.10 33 286 2.3E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 PIRSF PIRSF002599 1 68 1.8E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 40 58 4.1E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 25 34 4.1E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 PRINTS PR00050 Cold shock protein signature 4 19 4.1E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 SMART SM00357 3 67 3.7E-24 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.3E-24 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 Gene3D G3DSA:2.40.50.140 1 65 2.0E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 SUPERFAMILY SSF50249 1 66 5.57E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS08230 1361cc5d0c8a2fd31a48616f6b272ff1 68 PANTHER PTHR11544 1 68 2.6E-25 T 22-04-2016 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 6.3E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 6.3E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 6.3E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 Gene3D G3DSA:3.30.70.940 4 114 8.4E-42 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 SMART SM00738 2 111 1.6E-47 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 SMART SM00739 123 150 1.7E-4 T 22-04-2016 IPR005824 KOW TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 Pfam PF02357 Transcription termination factor nusG 4 107 2.5E-26 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 PANTHER PTHR30265 1 177 4.6E-73 T 22-04-2016 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 SUPERFAMILY SSF82679 4 113 3.53E-37 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 Gene3D G3DSA:2.30.30.30 116 177 5.8E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 2.9E-69 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 Pfam PF00467 KOW motif 127 156 2.1E-5 T 22-04-2016 IPR005824 KOW TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.697 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 TMO_RS13320 b0e22ccac6c84a38b6db9768eaf2dc94 177 SUPERFAMILY SSF50104 121 177 9.03E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain TMO_RS15575 0c0efd3fc004e33559b79686e23ebb36 77 PANTHER PTHR37827 15 73 9.1E-12 T 22-04-2016 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 PIRSF PIRSF002134 1 122 1.3E-45 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 Gene3D G3DSA:4.10.910.10 73 122 4.3E-30 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.1E-54 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 SUPERFAMILY SSF46946 2 121 6.92E-47 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.917 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.2E-33 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 PANTHER PTHR10871 2 122 1.0E-69 T 22-04-2016 TMO_RS13145 f0d64f371f31a1ce69a373c178240d25 122 Gene3D G3DSA:1.10.8.50 2 72 1.6E-29 T 22-04-2016 TMO_RS14035 0f574adfc241e48f8a56f1cd936857fe 408 Gene3D G3DSA:3.40.50.2300 62 227 1.1E-31 T 22-04-2016 TMO_RS14035 0f574adfc241e48f8a56f1cd936857fe 408 Gene3D G3DSA:3.40.50.2300 228 364 3.1E-10 T 22-04-2016 TMO_RS14035 0f574adfc241e48f8a56f1cd936857fe 408 PANTHER PTHR35271 58 404 2.7E-12 T 22-04-2016 TMO_RS14035 0f574adfc241e48f8a56f1cd936857fe 408 Pfam PF04392 ABC transporter substrate binding protein 148 401 2.2E-19 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein TMO_RS01450 edf2783342834b6c38b23838651a51f0 435 PIRSF PIRSF006066 4 435 6.3E-73 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS01450 edf2783342834b6c38b23838651a51f0 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 421 1.4E-64 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS01450 edf2783342834b6c38b23838651a51f0 435 PANTHER PTHR33362 5 434 2.3E-71 T 22-04-2016 TMO_RS01450 edf2783342834b6c38b23838651a51f0 435 PANTHER PTHR33362:SF5 5 434 2.3E-71 T 22-04-2016 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 22-04-2016 IPR033135 ClpP, histidine active site TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 Pfam PF00574 Clp protease 22 201 3.9E-86 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PANTHER PTHR10381:SF11 9 205 1.2E-144 T 22-04-2016 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 43.191 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 4.0E-97 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 SUPERFAMILY SSF52096 19 201 9.64E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PANTHER PTHR10381 9 205 1.2E-144 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 Gene3D G3DSA:3.90.226.10 20 206 1.8E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 22-04-2016 IPR018215 ClpP, Ser active site TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.4E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.4E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.4E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 1.4E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS09980 ca0535d36bf88c12b9a36612c24b12bf 210 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.4E-51 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 PANTHER PTHR30346 1 279 8.0E-81 T 22-04-2016 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:1.10.10.10 1 84 2.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:3.40.190.10 89 194 8.6E-24 T 22-04-2016 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 Pfam PF03466 LysR substrate binding domain 88 287 2.5E-34 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 SUPERFAMILY SSF53850 88 296 2.35E-31 T 22-04-2016 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 PANTHER PTHR30346:SF15 1 279 8.0E-81 T 22-04-2016 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 SUPERFAMILY SSF46785 1 110 6.34E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01345 e03afc65da074dfa6340a82d15384461 305 Gene3D G3DSA:3.40.190.10 195 270 7.1E-18 T 22-04-2016 TMO_RS00930 f02c5f2707b111a4de44be53863c0fcb 209 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 56 201 4.0E-12 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related TMO_RS00930 f02c5f2707b111a4de44be53863c0fcb 209 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 73 202 1.2E-14 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 TMO_RS15385 550d680a72b053a240c87cf01ddf781a 139 Gene3D G3DSA:3.10.129.10 2 116 8.2E-24 T 22-04-2016 IPR029069 HotDog domain TMO_RS15385 550d680a72b053a240c87cf01ddf781a 139 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 11 109 1.9E-13 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS15385 550d680a72b053a240c87cf01ddf781a 139 PANTHER PTHR12418:SF28 3 136 5.2E-13 T 22-04-2016 TMO_RS15385 550d680a72b053a240c87cf01ddf781a 139 SUPERFAMILY SSF54637 3 117 3.12E-21 T 22-04-2016 IPR029069 HotDog domain TMO_RS15385 550d680a72b053a240c87cf01ddf781a 139 PANTHER PTHR12418 3 136 5.2E-13 T 22-04-2016 TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 SMART SM00382 28 211 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 Gene3D G3DSA:3.40.50.300 3 234 3.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 Pfam PF08402 TOBE domain 277 352 8.3E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 SUPERFAMILY SSF52540 4 241 2.18E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 SUPERFAMILY SSF50331 238 352 2.21E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 PANTHER PTHR24220:SF150 5 245 2.5E-128 T 22-04-2016 TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 PANTHER PTHR24220 5 245 2.5E-128 T 22-04-2016 TMO_RS14335 900752860a43fdca9ef7bc8bc81205b6 359 Pfam PF00005 ABC transporter 20 161 4.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16355 a0cc12cc30e7fe912f038afabe99f5ff 1031 SUPERFAMILY SSF52540 555 705 6.27E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16355 a0cc12cc30e7fe912f038afabe99f5ff 1031 SUPERFAMILY SSF52540 333 504 6.27E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16355 a0cc12cc30e7fe912f038afabe99f5ff 1031 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 8 1025 7.1E-288 T 22-04-2016 IPR014153 Double-strand break repair protein AddB TMO_RS16355 a0cc12cc30e7fe912f038afabe99f5ff 1031 Pfam PF12705 PD-(D/E)XK nuclease superfamily 755 966 2.5E-23 T 22-04-2016 TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 112 132 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 Gene3D G3DSA:1.10.12.10 213 271 5.4E-13 T 22-04-2016 IPR014748 Crontonase, C-terminal TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 PANTHER PTHR11941 3 268 1.3E-60 T 22-04-2016 TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 SUPERFAMILY SSF52096 7 270 3.21E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 Gene3D G3DSA:3.90.226.10 4 207 4.6E-51 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS07055 6525e24cde86e8ca1388c045e9ee6103 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 270 2.9E-45 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS29335 a7e15399cc7139b432369e4c98efc6f9 384 SUPERFAMILY SSF52540 139 242 7.44E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29335 a7e15399cc7139b432369e4c98efc6f9 384 Gene3D G3DSA:3.40.50.300 155 242 4.7E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 SUPERFAMILY SSF51735 1 325 1.21E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 288 305 4.1E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 4.1E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 4.1E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PRINTS PR01713 Nucleotide sugar epimerase signature 249 264 4.1E-27 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 Gene3D G3DSA:3.90.25.10 186 325 1.1E-28 T 22-04-2016 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 Gene3D G3DSA:3.40.50.720 1 185 2.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 317 2.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PANTHER PTHR10366 2 325 3.0E-160 T 22-04-2016 TMO_RS03595 d134e70e5a986ffa2d5cac89409fc164 328 PANTHER PTHR10366:SF77 2 325 3.0E-160 T 22-04-2016 TMO_RS15765 cabeb279198b0d93ecb4592289cdfeff 439 PIRSF PIRSF006066 5 439 6.1E-79 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS15765 cabeb279198b0d93ecb4592289cdfeff 439 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 429 2.8E-82 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS15765 cabeb279198b0d93ecb4592289cdfeff 439 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 432 5.3E-82 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS15765 cabeb279198b0d93ecb4592289cdfeff 439 PANTHER PTHR33362 6 439 5.2E-131 T 22-04-2016 TMO_RS15765 cabeb279198b0d93ecb4592289cdfeff 439 PANTHER PTHR33362:SF5 6 439 5.2E-131 T 22-04-2016 TMO_RS08490 77f7bc1946c440aa66fd67a2bb475bd3 238 PANTHER PTHR23291 21 238 3.7E-75 T 22-04-2016 IPR006214 Bax inhibitor 1-related TMO_RS08490 77f7bc1946c440aa66fd67a2bb475bd3 238 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 232 3.4E-65 T 22-04-2016 TMO_RS08490 77f7bc1946c440aa66fd67a2bb475bd3 238 PANTHER PTHR23291:SF42 21 238 3.7E-75 T 22-04-2016 TMO_RS06100 3e1c6155f881a62a71393cd0b5dd2ab2 392 PANTHER PTHR22935:SF77 1 374 3.6E-89 T 22-04-2016 TMO_RS06100 3e1c6155f881a62a71393cd0b5dd2ab2 392 Pfam PF00144 Beta-lactamase 14 386 7.1E-63 T 22-04-2016 IPR001466 Beta-lactamase-related TMO_RS06100 3e1c6155f881a62a71393cd0b5dd2ab2 392 Gene3D G3DSA:3.40.710.10 3 375 3.0E-75 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS06100 3e1c6155f881a62a71393cd0b5dd2ab2 392 PANTHER PTHR22935 1 374 3.6E-89 T 22-04-2016 TMO_RS06100 3e1c6155f881a62a71393cd0b5dd2ab2 392 SUPERFAMILY SSF56601 6 380 3.86E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS08885 915d0e20bd12a2b50ea63a18b18d9911 396 SUPERFAMILY SSF53756 9 339 1.19E-33 T 22-04-2016 TMO_RS08885 915d0e20bd12a2b50ea63a18b18d9911 396 PANTHER PTHR30372 8 393 3.2E-99 T 22-04-2016 TMO_RS08885 915d0e20bd12a2b50ea63a18b18d9911 396 Pfam PF02684 Lipid-A-disaccharide synthetase 9 353 1.4E-99 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS08885 915d0e20bd12a2b50ea63a18b18d9911 396 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 8 387 8.2E-85 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS08885 915d0e20bd12a2b50ea63a18b18d9911 396 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 388 34.324 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 SUPERFAMILY SSF54534 219 348 6.59E-16 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 Pfam PF13145 PPIC-type PPIASE domain 246 364 7.0E-24 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 PANTHER PTHR10657 200 511 3.2E-64 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 PANTHER PTHR10657 1 173 3.2E-64 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 Gene3D G3DSA:3.10.50.40 260 373 5.5E-20 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 Gene3D G3DSA:3.10.50.40 376 489 1.3E-5 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 SUPERFAMILY SSF109998 240 295 1.1E-21 T 22-04-2016 IPR027304 Trigger factor/SurA domain TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 SUPERFAMILY SSF109998 39 167 1.1E-21 T 22-04-2016 IPR027304 Trigger factor/SurA domain TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 PANTHER PTHR10657:SF13 200 511 3.2E-64 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 PANTHER PTHR10657:SF13 1 173 3.2E-64 T 22-04-2016 TMO_RS08800 61cd6a63a418821a4ced1ce1a63715d9 637 Pfam PF13624 SurA N-terminal domain 1 163 3.6E-42 T 22-04-2016 TMO_RS17090 6de8bd3bb0e2cf2b8f4b5a34dce3af41 103 Gene3D G3DSA:1.10.630.10 8 102 6.4E-7 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 SMART SM00419 186 235 4.5E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 Gene3D G3DSA:2.60.120.10 25 168 2.0E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 Gene3D G3DSA:1.10.10.10 169 243 1.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 208 3.9E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 208 223 3.9E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 SUPERFAMILY SSF51206 25 162 1.09E-21 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 SMART SM00100 32 150 1.0E-9 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.0E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 ProSitePatterns PS00042 Crp-type HTH domain signature. 194 217 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 PANTHER PTHR24567:SF28 20 243 2.1E-62 T 22-04-2016 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 SUPERFAMILY SSF46785 164 243 5.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 PANTHER PTHR24567 20 243 2.1E-62 T 22-04-2016 TMO_RS10210 25c81d63342678d7dae56452fa5025d2 254 Pfam PF13545 Crp-like helix-turn-helix domain 167 241 3.8E-20 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 PANTHER PTHR30069:SF2 313 604 1.1E-63 T 22-04-2016 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 PANTHER PTHR30069:SF2 22 290 1.1E-63 T 22-04-2016 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 PANTHER PTHR30069 313 604 1.1E-63 T 22-04-2016 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 PANTHER PTHR30069 22 290 1.1E-63 T 22-04-2016 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 9.4E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 650 667 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 Gene3D G3DSA:2.40.170.20 168 667 1.5E-97 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 Pfam PF00593 TonB dependent receptor 421 665 6.2E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 Gene3D G3DSA:2.170.130.10 35 167 2.6E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 SUPERFAMILY SSF56935 34 230 2.93E-125 T 22-04-2016 TMO_RS14735 7445b2d58e7fb681cae2e45dcc644be5 667 SUPERFAMILY SSF56935 260 667 2.93E-125 T 22-04-2016 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 PANTHER PTHR30406:SF6 15 282 1.5E-139 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 22 275 3.1E-88 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 PANTHER PTHR30406 15 282 1.5E-139 T 22-04-2016 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 SUPERFAMILY SSF161098 22 270 1.87E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 Gene3D G3DSA:1.10.3720.10 25 278 2.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 16 278 2.5E-112 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 TMO_RS03570 1e82046454105bcdb94aab50395d9e8a 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 273 7.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 PANTHER PTHR13774 11 307 1.2E-74 T 22-04-2016 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 Gene3D G3DSA:3.10.310.10 11 137 5.1E-36 T 22-04-2016 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 PIRSF PIRSF016184 7 307 2.6E-77 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 PANTHER PTHR13774:SF15 11 307 1.2E-74 T 22-04-2016 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 Gene3D G3DSA:3.10.310.10 143 297 5.1E-34 T 22-04-2016 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 SUPERFAMILY SSF54506 10 306 8.17E-62 T 22-04-2016 TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 Pfam PF02567 Phenazine biosynthesis-like protein 15 304 9.6E-62 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS10645 433881aa4ca0e01fc52f4bbbf1203073 310 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 11 305 5.5E-68 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 PANTHER PTHR30177:SF0 8 283 1.5E-72 T 22-04-2016 TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 278 4.6E-71 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 Gene3D G3DSA:3.40.190.100 128 241 6.9E-43 T 22-04-2016 TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 PANTHER PTHR30177 8 283 1.5E-72 T 22-04-2016 TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 Gene3D G3DSA:3.40.190.10 26 127 2.7E-22 T 22-04-2016 TMO_RS04385 0f36d9c0573d3df6b4ff5db77189d9c8 294 SUPERFAMILY SSF53850 25 292 8.69E-83 T 22-04-2016 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 SMART SM00382 222 353 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 Pfam PF00308 Bacterial dnaA protein 190 406 1.2E-89 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PANTHER PTHR30050 26 128 8.4E-137 T 22-04-2016 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PANTHER PTHR30050 188 410 8.4E-137 T 22-04-2016 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 269 2.2E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 223 243 2.2E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 321 348 2.2E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 287 301 2.2E-38 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 Gene3D G3DSA:3.40.50.300 186 354 2.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 Pfam PF11638 DnaA N-terminal domain 29 90 2.6E-21 T 22-04-2016 IPR024633 DnaA N-terminal domain TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 SUPERFAMILY SSF52540 190 402 1.48E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 31 409 1.4E-118 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PANTHER PTHR30050:SF2 26 128 8.4E-137 T 22-04-2016 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 PANTHER PTHR30050:SF2 188 410 8.4E-137 T 22-04-2016 TMO_RS28515 195814a3ea7faa2279b3088e7e5bc261 410 Gene3D G3DSA:1.10.8.60 357 409 8.1E-20 T 22-04-2016 TMO_RS16135 8a5360c6833c1e50136854f90c93d0f3 315 SUPERFAMILY SSF51569 8 291 7.69E-63 T 22-04-2016 TMO_RS16135 8a5360c6833c1e50136854f90c93d0f3 315 Gene3D G3DSA:3.20.20.70 10 290 9.2E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16135 8a5360c6833c1e50136854f90c93d0f3 315 Pfam PF00682 HMGL-like 11 288 7.0E-45 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS16135 8a5360c6833c1e50136854f90c93d0f3 315 PANTHER PTHR10277:SF1 8 307 1.0E-94 T 22-04-2016 TMO_RS16135 8a5360c6833c1e50136854f90c93d0f3 315 PANTHER PTHR10277 8 307 1.0E-94 T 22-04-2016 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 Gene3D G3DSA:1.10.10.60 222 270 7.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 Gene3D G3DSA:1.10.10.60 271 319 1.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF52317 5 195 4.01E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 PANTHER PTHR11019 88 323 7.8E-83 T 22-04-2016 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 Pfam PF12833 Helix-turn-helix domain 238 317 9.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 Gene3D G3DSA:3.40.50.880 5 221 1.0E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 Pfam PF01965 DJ-1/PfpI family 5 176 2.0E-28 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 SMART SM00342 232 315 5.5E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF46689 269 320 2.24E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 PANTHER PTHR11019:SF58 88 323 7.8E-83 T 22-04-2016 TMO_RS02735 406ddf9e771d4b82de32f3410c0d4d26 335 SUPERFAMILY SSF46689 218 265 7.17E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02730 fd56cb7ab7725150d7f512a8f78a2af6 213 SUPERFAMILY SSF109604 32 122 4.19E-14 T 22-04-2016 TMO_RS02730 fd56cb7ab7725150d7f512a8f78a2af6 213 Gene3D G3DSA:1.10.3210.10 28 138 1.8E-10 T 22-04-2016 IPR006674 HD domain TMO_RS02730 fd56cb7ab7725150d7f512a8f78a2af6 213 PANTHER PTHR35569 1 213 8.0E-82 T 22-04-2016 TMO_RS02730 fd56cb7ab7725150d7f512a8f78a2af6 213 Pfam PF01966 HD domain 32 117 2.1E-7 T 22-04-2016 IPR006674 HD domain TMO_RS02730 fd56cb7ab7725150d7f512a8f78a2af6 213 PANTHER PTHR35569:SF1 1 213 8.0E-82 T 22-04-2016 TMO_RS11155 ea5b049e98367b492c8218b2ee454a9b 250 Gene3D G3DSA:3.40.50.300 80 166 1.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11155 ea5b049e98367b492c8218b2ee454a9b 250 PIRSF PIRSF034285 1 250 3.4E-72 T 22-04-2016 IPR017026 Inducible mutagenesis protein A TMO_RS11155 ea5b049e98367b492c8218b2ee454a9b 250 SUPERFAMILY SSF52540 50 167 7.57E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 886 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 3.2E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 Pfam PF01433 Peptidase family M1 118 389 6.3E-65 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PANTHER PTHR11533 622 886 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PANTHER PTHR11533 2 598 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 SUPERFAMILY SSF55486 208 456 6.96E-77 T 22-04-2016 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:1.10.390.10 313 456 5.5E-31 T 22-04-2016 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 SUPERFAMILY SSF63737 7 198 2.62E-41 T 22-04-2016 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 Gene3D G3DSA:1.25.50.10 560 887 5.0E-129 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PANTHER PTHR11533:SF152 622 886 0.0 T 22-04-2016 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 PANTHER PTHR11533:SF152 2 598 0.0 T 22-04-2016 TMO_RS06095 c49115d0d86beccdebf52aabae4404e2 887 Pfam PF11940 Domain of unknown function (DUF3458) 464 844 1.8E-139 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 3.4E-22 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 Gene3D G3DSA:3.40.5.10 1 52 1.7E-23 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 145 3.1E-36 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 PANTHER PTHR21368 1 163 8.9E-42 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 6.8E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 SUPERFAMILY SSF55653 59 146 1.26E-21 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 SUPERFAMILY SSF55658 1 54 1.05E-17 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 Gene3D G3DSA:3.10.430.100 62 146 3.0E-23 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal TMO_RS09405 516584c5a88ec12a6ab567fa77612e0e 189 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.904 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 PANTHER PTHR13847 1 63 4.0E-217 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 PANTHER PTHR13847 107 418 4.0E-217 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 PANTHER PTHR13847:SF148 1 63 4.0E-217 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 PANTHER PTHR13847:SF148 107 418 4.0E-217 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.30.9.10 270 359 7.5E-15 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.30.9.10 135 190 7.5E-15 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Pfam PF01266 FAD dependent oxidoreductase 2 398 1.5E-68 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF51905 2 54 3.37E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF51905 360 416 3.37E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF51905 107 270 3.37E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.282 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 SUPERFAMILY SSF54373 270 360 2.75E-18 T 22-04-2016 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 191 269 1.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 360 416 1.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 108 130 1.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01110 17d3ccae4101cef422a18acb15b2143d 418 Gene3D G3DSA:3.50.50.60 2 58 1.7E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11230 79e879f3a54527370e0a5042cddd2448 285 Gene3D G3DSA:3.40.50.10140 3 115 1.1E-19 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS11230 79e879f3a54527370e0a5042cddd2448 285 SUPERFAMILY SSF52200 3 123 6.54E-26 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS11230 79e879f3a54527370e0a5042cddd2448 285 SMART SM00255 3 129 2.4E-4 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS11230 79e879f3a54527370e0a5042cddd2448 285 Pfam PF13676 TIR domain 3 109 2.3E-22 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS15120 08795d842337f298349170cfb5ab6baa 107 Pfam PF13499 EF-hand domain pair 34 100 1.2E-7 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 TMO_RS15120 08795d842337f298349170cfb5ab6baa 107 Gene3D G3DSA:1.10.238.10 33 101 1.5E-9 T 22-04-2016 IPR011992 EF-hand domain pair TMO_RS15120 08795d842337f298349170cfb5ab6baa 107 SUPERFAMILY SSF47473 33 101 5.42E-9 T 22-04-2016 IPR011992 EF-hand domain pair TMO_RS15120 08795d842337f298349170cfb5ab6baa 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 89 101 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site TMO_RS15120 08795d842337f298349170cfb5ab6baa 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 38 50 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 PANTHER PTHR11851:SF136 14 460 4.2E-87 T 22-04-2016 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 Pfam PF05193 Peptidase M16 inactive domain 219 402 4.8E-18 T 22-04-2016 IPR007863 Peptidase M16, C-terminal TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 85 108 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 SUPERFAMILY SSF63411 294 463 1.67E-23 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 Gene3D G3DSA:3.30.830.10 58 264 4.5E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 Gene3D G3DSA:3.30.830.10 317 463 5.4E-17 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 PANTHER PTHR11851 14 460 4.2E-87 T 22-04-2016 TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 Pfam PF00675 Insulinase (Peptidase family M16) 65 210 3.3E-26 T 22-04-2016 IPR011765 Peptidase M16, N-terminal TMO_RS14555 64b71482e6863a3cc35e2b2c6c01d358 497 SUPERFAMILY SSF63411 54 262 1.74E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 Pfam PF01192 RNA polymerase Rpb6 8 59 1.0E-11 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 Gene3D G3DSA:3.90.940.10 1 68 1.8E-11 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 16.478 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 SUPERFAMILY SSF63562 1 80 2.09E-20 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 SMART SM01409 8 60 6.8E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 56 3.6E-16 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS07995 0c75d8ca5c63caceb93949d7aa586fdc 133 PANTHER PTHR34476 2 90 3.5E-20 T 22-04-2016 TMO_RS01745 19cac5f2d760eca878847cdc2427d6d2 211 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 6.1E-46 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 TMO_RS06805 1f57f3050e9471202be152e5b5472c4f 434 Pfam PF07690 Major Facilitator Superfamily 31 373 2.9E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS06805 1f57f3050e9471202be152e5b5472c4f 434 PANTHER PTHR23505 24 420 4.3E-67 T 22-04-2016 TMO_RS06805 1f57f3050e9471202be152e5b5472c4f 434 SUPERFAMILY SSF103473 24 430 2.22E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS06805 1f57f3050e9471202be152e5b5472c4f 434 Gene3D G3DSA:1.20.1250.20 26 206 1.1E-42 T 22-04-2016 TMO_RS06805 1f57f3050e9471202be152e5b5472c4f 434 Gene3D G3DSA:1.20.1250.20 241 430 4.0E-11 T 22-04-2016 TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 PANTHER PTHR21152 4 378 3.0E-176 T 22-04-2016 TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 Pfam PF00266 Aminotransferase class-V 135 313 1.4E-5 T 22-04-2016 IPR000192 Aminotransferase class V domain TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 SUPERFAMILY SSF53383 9 378 3.02E-73 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 9 380 1.9E-202 T 22-04-2016 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 Gene3D G3DSA:3.40.640.10 23 264 3.4E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 PIRSF PIRSF000525 14 382 4.8E-48 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 TMO_RS04620 fc03077cfd530e3672d6e2c7d1424e56 388 PANTHER PTHR21152:SF23 4 378 3.0E-176 T 22-04-2016 TMO_RS11025 228ae69bdc527ec30118d03a6f294ec9 227 Pfam PF04335 VirB8 protein 21 224 2.8E-68 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 TMO_RS11025 228ae69bdc527ec30118d03a6f294ec9 227 SUPERFAMILY SSF54427 92 226 9.2E-30 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS06865 be16edfd348d69c8cde576a52b6fdf2f 465 ProSitePatterns PS00571 Amidases signature. 155 186 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06865 be16edfd348d69c8cde576a52b6fdf2f 465 Gene3D G3DSA:3.90.1300.10 3 461 1.4E-135 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06865 be16edfd348d69c8cde576a52b6fdf2f 465 SUPERFAMILY SSF75304 3 454 1.44E-131 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06865 be16edfd348d69c8cde576a52b6fdf2f 465 PANTHER PTHR11895 5 463 5.2E-144 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06865 be16edfd348d69c8cde576a52b6fdf2f 465 Pfam PF01425 Amidase 27 446 5.8E-106 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 Pfam PF01613 Flavin reductase like domain 23 157 2.8E-21 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 PANTHER PTHR30466:SF6 2 179 8.5E-42 T 22-04-2016 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 Gene3D G3DSA:2.30.110.10 9 177 1.2E-39 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 SUPERFAMILY SSF50475 10 176 2.45E-37 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 PANTHER PTHR30466 2 179 8.5E-42 T 22-04-2016 TMO_RS09030 d322962c94a09393553f7d0fd15aa124 188 SMART SM00903 19 171 1.3E-14 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS29220 0c6e44eace52598c04502f69559dd30e 344 Pfam PF05036 Sporulation related domain 263 342 5.6E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS29220 0c6e44eace52598c04502f69559dd30e 344 Gene3D G3DSA:3.30.70.1070 263 340 8.0E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS29220 0c6e44eace52598c04502f69559dd30e 344 SUPERFAMILY SSF110997 264 340 7.06E-9 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS03035 ac8f94ff778e77316b50969f98a5d6a3 182 SUPERFAMILY SSF53474 4 175 9.6E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS03035 ac8f94ff778e77316b50969f98a5d6a3 182 Pfam PF06821 Serine hydrolase 6 176 2.7E-64 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- TMO_RS03035 ac8f94ff778e77316b50969f98a5d6a3 182 Gene3D G3DSA:3.40.50.1820 4 181 3.2E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 2.5E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 Gene3D G3DSA:1.20.120.530 99 226 1.2E-20 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 PANTHER PTHR11751 9 82 1.2E-21 T 22-04-2016 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 PANTHER PTHR11751 98 116 1.2E-21 T 22-04-2016 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 SUPERFAMILY SSF48008 99 226 9.42E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 SMART SM00345 16 75 8.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.2E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.2E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 Pfam PF07729 FCD domain 100 222 1.9E-22 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 SMART SM00895 100 223 4.7E-21 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 Gene3D G3DSA:1.10.10.10 10 76 1.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01440 87ce51a5641c1e14b971a0b8222a1725 242 SUPERFAMILY SSF46785 11 79 9.11E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00460 096f7409befba889d498f0169bb7a8f2 387 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 100 333 3.3E-21 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 TMO_RS00460 096f7409befba889d498f0169bb7a8f2 387 PANTHER PTHR37539:SF2 154 284 6.8E-12 T 22-04-2016 TMO_RS00460 096f7409befba889d498f0169bb7a8f2 387 PANTHER PTHR37539 154 284 6.8E-12 T 22-04-2016 TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 Pfam PF00665 Integrase core domain 124 249 8.2E-14 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 Pfam PF13384 Homeodomain-like domain 12 37 1.0E-5 T 22-04-2016 TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 SUPERFAMILY SSF46689 6 75 9.32E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 Gene3D G3DSA:1.10.10.10 13 38 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 PANTHER PTHR35004:SF2 1 440 5.5E-67 T 22-04-2016 TMO_RS04085 4e664a2e1f4ddf7d3d55df90414c401f 499 PANTHER PTHR35004 1 440 5.5E-67 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 PANTHER PTHR30632 8 264 3.4E-49 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 SUPERFAMILY SSF53850 28 262 3.21E-56 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 Gene3D G3DSA:3.40.190.10 113 221 7.1E-35 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 Pfam PF13531 Bacterial extracellular solute-binding protein 29 260 2.0E-45 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 Gene3D G3DSA:3.40.190.10 222 263 5.9E-12 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 Gene3D G3DSA:3.40.190.10 4 112 5.9E-12 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 PIRSF PIRSF004846 1 264 2.1E-61 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 PANTHER PTHR30632:SF0 8 264 3.4E-49 T 22-04-2016 TMO_RS15015 efa021097931eb0b20d33f67aa5fff16 265 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 259 8.6E-53 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 TMO_RS16905 c3368ca934be9f1324f41dbcfb016917 211 Gene3D G3DSA:3.40.630.30 2 194 1.9E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16905 c3368ca934be9f1324f41dbcfb016917 211 Pfam PF13302 Acetyltransferase (GNAT) domain 16 153 7.7E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS16905 c3368ca934be9f1324f41dbcfb016917 211 PANTHER PTHR13256:SF22 3 201 1.1E-64 T 22-04-2016 TMO_RS16905 c3368ca934be9f1324f41dbcfb016917 211 PANTHER PTHR13256 3 201 1.1E-64 T 22-04-2016 TMO_RS16905 c3368ca934be9f1324f41dbcfb016917 211 SUPERFAMILY SSF55729 9 178 4.5E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS26450 3efe1da82380c5cc71722393409a238e 298 PANTHER PTHR11019 19 297 1.0E-44 T 22-04-2016 TMO_RS26450 3efe1da82380c5cc71722393409a238e 298 PANTHER PTHR11019:SF58 19 297 1.0E-44 T 22-04-2016 TMO_RS26450 3efe1da82380c5cc71722393409a238e 298 Pfam PF01965 DJ-1/PfpI family 63 234 1.5E-28 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS26450 3efe1da82380c5cc71722393409a238e 298 Gene3D G3DSA:3.40.50.880 63 287 7.2E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS26450 3efe1da82380c5cc71722393409a238e 298 SUPERFAMILY SSF52317 63 253 3.05E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS07110 4e203b1251c71452680188b49e0b5a85 202 PANTHER PTHR13887 1 198 2.0E-24 T 22-04-2016 TMO_RS07110 4e203b1251c71452680188b49e0b5a85 202 Pfam PF01323 DSBA-like thioredoxin domain 5 197 7.8E-32 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 TMO_RS07110 4e203b1251c71452680188b49e0b5a85 202 PIRSF PIRSF006386 1 201 3.7E-52 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa TMO_RS07110 4e203b1251c71452680188b49e0b5a85 202 Gene3D G3DSA:3.40.30.10 2 199 5.9E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07110 4e203b1251c71452680188b49e0b5a85 202 SUPERFAMILY SSF52833 3 198 1.17E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 44.248 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 7.4E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 SUPERFAMILY SSF53098 1 157 1.48E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 5.6E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.9E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 7.9E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.9E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 7.9E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.9E-30 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 PANTHER PTHR30194 1 154 5.6E-59 T 22-04-2016 TMO_RS04525 cd6f6bf0e291fda41143440c437726c8 166 Gene3D G3DSA:3.30.420.10 1 156 4.4E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS04030 412b34e27ae0f61992f2ab6a635a65a7 163 PANTHER PTHR22936:SF4 28 155 1.1E-18 T 22-04-2016 TMO_RS04030 412b34e27ae0f61992f2ab6a635a65a7 163 Pfam PF01694 Rhomboid family 24 157 2.3E-28 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TMO_RS04030 412b34e27ae0f61992f2ab6a635a65a7 163 SUPERFAMILY SSF144091 21 162 8.76E-30 T 22-04-2016 TMO_RS04030 412b34e27ae0f61992f2ab6a635a65a7 163 Gene3D G3DSA:1.20.1540.10 23 161 3.7E-29 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 TMO_RS04030 412b34e27ae0f61992f2ab6a635a65a7 163 PANTHER PTHR22936 28 155 1.1E-18 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 PANTHER PTHR30024 28 355 1.3E-23 T 22-04-2016 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 25 351 2.4E-44 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 Gene3D G3DSA:3.40.190.10 143 257 8.3E-25 T 22-04-2016 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 Pfam PF16868 NMT1-like family 51 351 4.0E-44 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 Gene3D G3DSA:3.40.190.10 280 353 2.6E-28 T 22-04-2016 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 Gene3D G3DSA:3.40.190.10 46 126 2.6E-28 T 22-04-2016 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 SUPERFAMILY SSF53850 45 353 4.8E-49 T 22-04-2016 TMO_RS02050 d686136ff0176e227d4a1dc68d1da77d 355 PANTHER PTHR30024:SF5 28 355 1.3E-23 T 22-04-2016 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 PANTHER PTHR11880 2 92 6.0E-48 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 Pfam PF00203 Ribosomal protein S19 3 83 4.2E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.4E-21 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.4E-21 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.4E-21 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.367 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 SUPERFAMILY SSF54570 3 84 1.09E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 Gene3D G3DSA:3.30.860.10 2 91 4.5E-39 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 PIRSF PIRSF002144 1 92 2.1E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 TMO_RS13235 ce87c42c05f2d19b86e822ca554e8531 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 1.5E-41 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 417 1.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 SMART SM00387 305 418 6.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 SMART SM00388 190 259 4.6E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 191 259 3.7E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 SUPERFAMILY SSF47384 175 260 3.34E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 7.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 7.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 7.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 SUPERFAMILY SSF55874 248 420 6.29E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 Gene3D G3DSA:1.10.287.130 187 244 6.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 PANTHER PTHR24423 9 43 5.2E-72 T 22-04-2016 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 PANTHER PTHR24423 169 420 5.2E-72 T 22-04-2016 TMO_RS06305 b7012e2820a42d6024c813789969bacd 425 Gene3D G3DSA:3.30.565.10 245 419 1.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS14800 7aef9ab39c0eb0f9499cdcf791bea2f8 224 PANTHER PTHR34229:SF2 2 212 2.1E-107 T 22-04-2016 TMO_RS14800 7aef9ab39c0eb0f9499cdcf791bea2f8 224 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 215 28.384 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 TMO_RS14800 7aef9ab39c0eb0f9499cdcf791bea2f8 224 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 2.6E-45 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 TMO_RS14800 7aef9ab39c0eb0f9499cdcf791bea2f8 224 PANTHER PTHR34229 2 212 2.1E-107 T 22-04-2016 TMO_RS14800 7aef9ab39c0eb0f9499cdcf791bea2f8 224 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 206 1.5E-88 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 TMO_RS13520 125670bcf42b4e7b44cca4f0c180b336 252 PANTHER PTHR10859 12 250 1.2E-64 T 22-04-2016 TMO_RS13520 125670bcf42b4e7b44cca4f0c180b336 252 Pfam PF00535 Glycosyl transferase family 2 15 181 4.5E-22 T 22-04-2016 IPR001173 Glycosyltransferase 2-like TMO_RS13520 125670bcf42b4e7b44cca4f0c180b336 252 PANTHER PTHR10859:SF49 12 250 1.2E-64 T 22-04-2016 TMO_RS13520 125670bcf42b4e7b44cca4f0c180b336 252 Gene3D G3DSA:3.90.550.10 11 126 7.3E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS13520 125670bcf42b4e7b44cca4f0c180b336 252 SUPERFAMILY SSF53448 7 237 8.84E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03395 bce035167e6b8296c2a50daa9f111596 181 SUPERFAMILY SSF56209 6 150 5.34E-9 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS03395 bce035167e6b8296c2a50daa9f111596 181 Gene3D G3DSA:3.90.330.10 6 125 5.7E-7 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 Gene3D G3DSA:3.40.50.720 116 192 3.5E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 SMART SM00829 11 261 5.5E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 PANTHER PTHR11695 1 247 1.7E-22 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 Pfam PF13602 Zinc-binding dehydrogenase 160 245 2.2E-6 T 22-04-2016 TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 SUPERFAMILY SSF51735 79 194 1.77E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 SUPERFAMILY SSF50129 233 253 1.73E-17 T 22-04-2016 IPR011032 GroES-like TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 SUPERFAMILY SSF50129 1 83 1.73E-17 T 22-04-2016 IPR011032 GroES-like TMO_RS07525 5f04ccee71624220eb2dd7e3cfe02bad 265 Gene3D G3DSA:3.90.180.10 1 115 2.5E-19 T 22-04-2016 IPR011032 GroES-like TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 2.6E-67 T 22-04-2016 TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 Gene3D G3DSA:3.40.50.720 3 257 2.9E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 SUPERFAMILY SSF51735 7 257 1.63E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 194 2.7E-4 T 22-04-2016 TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PANTHER PTHR24321:SF6 3 257 4.3E-60 T 22-04-2016 TMO_RS03260 04fbb8becab9e1ce3a634e25b4452aab 258 PANTHER PTHR24321 3 257 4.3E-60 T 22-04-2016 TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 PANTHER PTHR15892 3 64 4.7E-25 T 22-04-2016 TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 PIRSF PIRSF002211 1 64 1.4E-25 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 Gene3D G3DSA:3.30.1390.20 5 63 4.8E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 PANTHER PTHR15892:SF2 3 64 4.7E-25 T 22-04-2016 TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 Pfam PF00327 Ribosomal protein L30p/L7e 8 58 9.3E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 62 19.034 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 SUPERFAMILY SSF55129 6 63 2.09E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain TMO_RS13165 03ee89c26fbb9c848127b3f35d94ed05 64 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 8 62 1.7E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 TMO_RS11135 107dc72958c5a7c926c9881de17e3b43 277 SUPERFAMILY SSF53335 14 254 9.29E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS11135 107dc72958c5a7c926c9881de17e3b43 277 Gene3D G3DSA:3.40.50.150 13 256 1.1E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS11135 107dc72958c5a7c926c9881de17e3b43 277 Pfam PF13649 Methyltransferase domain 50 145 8.6E-20 T 22-04-2016 TMO_RS11135 107dc72958c5a7c926c9881de17e3b43 277 PANTHER PTHR10108 15 225 2.9E-29 T 22-04-2016 TMO_RS11135 107dc72958c5a7c926c9881de17e3b43 277 PANTHER PTHR10108 259 270 2.9E-29 T 22-04-2016 TMO_RS05995 9701755445178a31437137ff827b017f 226 Gene3D G3DSA:3.40.50.850 2 222 1.8E-67 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS05995 9701755445178a31437137ff827b017f 226 PANTHER PTHR11080 1 223 5.5E-75 T 22-04-2016 TMO_RS05995 9701755445178a31437137ff827b017f 226 PANTHER PTHR11080:SF19 1 223 5.5E-75 T 22-04-2016 TMO_RS05995 9701755445178a31437137ff827b017f 226 Pfam PF00857 Isochorismatase family 22 207 1.1E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS05995 9701755445178a31437137ff827b017f 226 SUPERFAMILY SSF52499 2 214 2.35E-55 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 SUPERFAMILY SSF102114 7 435 1.29E-114 T 22-04-2016 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 10 437 9.2E-129 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 Pfam PF04055 Radical SAM superfamily 48 219 9.1E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 PANTHER PTHR13932:SF6 9 442 5.5E-174 T 22-04-2016 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 SMART SM00729 43 261 1.4E-50 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 PIRSF PIRSF000167 1 445 1.2E-159 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 PANTHER PTHR13932 9 442 5.5E-174 T 22-04-2016 TMO_RS02260 6c6ed91b0863a56acafa8dc66ee6e16d 446 Gene3D G3DSA:3.80.30.20 44 246 1.8E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS06570 3a29796667a3dc1192abd3f2e48be6e4 113 Pfam PF11804 Protein of unknown function (DUF3325) 10 108 1.4E-26 T 22-04-2016 IPR021762 Protein of unknown function DUF3325 TMO_RS09280 11ad92c8c555c17e67bdc24fc3b382ee 159 Pfam PF04364 DNA polymerase III chi subunit, HolC 13 145 1.7E-34 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 TMO_RS09280 11ad92c8c555c17e67bdc24fc3b382ee 159 Gene3D G3DSA:3.40.50.10110 13 149 1.7E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 TMO_RS09280 11ad92c8c555c17e67bdc24fc3b382ee 159 SUPERFAMILY SSF102400 13 149 1.44E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 179 194 4.8 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 393 410 8.2E-4 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 6 22 1.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 519 536 0.0014 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 307 322 19.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 53 69 0.35 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 411 428 0.0082 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 268 284 0.031 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 140 157 0.019 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 285 302 0.0044 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 159 175 0.006 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 432 448 0.062 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 33 49 0.14 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 311 462 8.89E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 5 225 1.3E-31 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 Gene3D G3DSA:2.150.10.10 377 592 3.5E-34 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 423 637 1.44E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 277 285 1.0E-10 T 22-04-2016 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 286 294 1.0E-10 T 22-04-2016 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 265 276 1.0E-10 T 22-04-2016 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 PRINTS PR00313 NodO calcium binding signature 295 304 1.0E-10 T 22-04-2016 TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 166 197 4.97E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 224 331 4.97E-22 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 3 96 2.22E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 SUPERFAMILY SSF51120 51 239 2.09E-20 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 525 543 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 399 417 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 146 164 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 20 38 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 273 291 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS11880 93173efd5e28cbd1f7f0ab50d8e8267e 646 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 282 300 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 PANTHER PTHR24220:SF123 16 260 8.6E-101 T 22-04-2016 TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 SUPERFAMILY SSF52540 15 256 1.6E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 PANTHER PTHR24220 16 260 8.6E-101 T 22-04-2016 TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 Gene3D G3DSA:3.40.50.300 7 251 3.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 SMART SM00382 39 227 3.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14645 ffdfdd37c36c9f8474f8ac81f3fb77b2 371 Pfam PF00005 ABC transporter 30 177 3.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 201 3.7E-7 T 22-04-2016 TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PANTHER PTHR13078:SF55 46 293 1.6E-107 T 22-04-2016 TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 SUPERFAMILY SSF51735 2 252 2.11E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 3.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 3.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 Pfam PF00106 short chain dehydrogenase 5 192 1.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 9.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 9.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 9.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 PANTHER PTHR13078 46 293 1.6E-107 T 22-04-2016 TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 Gene3D G3DSA:3.40.50.720 2 258 1.8E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03530 c5a5ecafc0e231005aa3dfea062ddd3e 301 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 PIRSF PIRSF005052 18 302 1.8E-96 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 PANTHER PTHR30448 9 305 2.4E-110 T 22-04-2016 TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 SUPERFAMILY SSF52540 17 170 3.09E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 18 300 40.79 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 PANTHER PTHR30448:SF0 9 305 2.4E-110 T 22-04-2016 TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 Gene3D G3DSA:3.40.50.300 16 172 1.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00895 c9d56cf027a3275a51263b0b443b6a37 314 Pfam PF03668 P-loop ATPase protein family 20 298 1.4E-86 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 TMO_RS07495 71482b455b52dba1d59470b83af34062 126 Gene3D G3DSA:3.30.2130.10 10 123 3.3E-15 T 22-04-2016 TMO_RS07495 71482b455b52dba1d59470b83af34062 126 PIRSF PIRSF008459 2 126 3.6E-27 T 22-04-2016 IPR016540 Uncharacterised conserved protein UCP008459 TMO_RS07495 71482b455b52dba1d59470b83af34062 126 SUPERFAMILY SSF55021 62 125 6.3E-17 T 22-04-2016 TMO_RS07495 71482b455b52dba1d59470b83af34062 126 Pfam PF13840 ACT domain 58 119 1.7E-17 T 22-04-2016 IPR027795 GATS-like ACT domain TMO_RS07495 71482b455b52dba1d59470b83af34062 126 SUPERFAMILY SSF55021 2 58 2.75E-16 T 22-04-2016 TMO_RS07495 71482b455b52dba1d59470b83af34062 126 PANTHER PTHR31131 3 125 3.5E-30 T 22-04-2016 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 10 185 1.1E-59 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 SUPERFAMILY SSF52540 10 185 4.74E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 Gene3D G3DSA:3.40.50.300 82 162 1.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 Gene3D G3DSA:3.40.50.300 10 32 1.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 PANTHER PTHR23117:SF8 4 186 8.6E-44 T 22-04-2016 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 9 186 33.364 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 PANTHER PTHR23117 4 186 8.6E-44 T 22-04-2016 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 Pfam PF13671 AAA domain 12 148 1.4E-10 T 22-04-2016 TMO_RS10540 388fe2099b9d59586465e2b25cbc8915 187 SMART SM00072 9 185 2.9E-5 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 PANTHER PTHR24220:SF568 3 231 1.9E-95 T 22-04-2016 TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 SUPERFAMILY SSF52540 2 223 1.28E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 SMART SM00382 26 208 4.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 Pfam PF00005 ABC transporter 17 159 2.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 Gene3D G3DSA:3.40.50.300 1 224 7.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03220 19a9d51326872a51763abbe749ef6893 231 PANTHER PTHR24220 3 231 1.9E-95 T 22-04-2016 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF101353 246 459 7.59E-58 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF55681 3 245 2.11E-109 T 22-04-2016 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PANTHER PTHR11777:SF9 1 883 0.0 T 22-04-2016 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF02272 DHHA1 domain 810 878 5.6E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 5.6E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 5.6E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 5.6E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 5.6E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 5.6E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 865 1.5E-289 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF01411 tRNA synthetases class II (A) 6 556 3.4E-214 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 707 4.1E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 SMART SM00863 654 707 1.0E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 884 194.518 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 Gene3D G3DSA:3.30.930.10 2 241 8.2E-115 T 22-04-2016 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 PANTHER PTHR11777 1 883 0.0 T 22-04-2016 TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF50447 453 553 9.18E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS05690 dde6e5ce8f13d65b881e3a00b237c951 884 SUPERFAMILY SSF55186 553 722 1.57E-50 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 TMO_RS03375 4377224043ab215132b24a94f4487a99 348 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 331 6.4E-61 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS03375 4377224043ab215132b24a94f4487a99 348 PANTHER PTHR33376 14 348 2.7E-60 T 22-04-2016 TMO_RS09810 a29f8525258583213ee24a41464eba52 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 415 8.3E-140 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 TMO_RS09810 a29f8525258583213ee24a41464eba52 415 Pfam PF02687 FtsX-like permease family 275 408 1.1E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_RS09810 a29f8525258583213ee24a41464eba52 415 Pfam PF12704 MacB-like periplasmic core domain 29 241 2.2E-16 T 22-04-2016 IPR025857 MacB-like periplasmic core domain TMO_RS09810 a29f8525258583213ee24a41464eba52 415 PANTHER PTHR30489 1 415 2.7E-74 T 22-04-2016 TMO_RS12385 1095f7c07d4a756e973f9f35bce238b0 140 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 137 9.694 T 22-04-2016 IPR022907 VapC family GO:0004540 TMO_RS12385 1095f7c07d4a756e973f9f35bce238b0 140 SUPERFAMILY SSF88723 1 138 2.61E-18 T 22-04-2016 IPR029060 PIN domain-like TMO_RS12385 1095f7c07d4a756e973f9f35bce238b0 140 Pfam PF01850 PIN domain 2 130 1.1E-16 T 22-04-2016 IPR002716 PIN domain TMO_RS12385 1095f7c07d4a756e973f9f35bce238b0 140 Gene3D G3DSA:3.40.50.1010 1 139 5.1E-14 T 22-04-2016 IPR029060 PIN domain-like TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 Gene3D G3DSA:1.10.3720.10 123 351 5.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 PANTHER PTHR30465:SF66 65 356 1.1E-189 T 22-04-2016 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 PANTHER PTHR30465:SF66 1 45 1.1E-189 T 22-04-2016 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 SUPERFAMILY SSF161098 123 341 6.38E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 147 354 1.2E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 PANTHER PTHR30465 65 356 1.1E-189 T 22-04-2016 TMO_RS16060 35aa59478d04088608ecd55080be6b18 361 PANTHER PTHR30465 1 45 1.1E-189 T 22-04-2016 TMO_RS29375 ce4450f3dc3750b69c08c13081effc3f 292 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 6 44 1.7E-19 T 22-04-2016 IPR017136 Uncharacterised conserved protein UCP037205 TMO_RS29375 ce4450f3dc3750b69c08c13081effc3f 292 PANTHER PTHR37463:SF1 2 234 8.4E-17 T 22-04-2016 TMO_RS29375 ce4450f3dc3750b69c08c13081effc3f 292 PANTHER PTHR37463 2 234 8.4E-17 T 22-04-2016 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 SUPERFAMILY SSF46548 125 242 2.98E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 179 190 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 Pfam PF08331 Domain of unknown function (DUF1730) 50 126 2.0E-20 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 SUPERFAMILY SSF48371 290 337 2.07E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 PANTHER PTHR30002:SF4 1 358 2.0E-133 T 22-04-2016 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 Pfam PF13484 4Fe-4S double cluster binding domain 178 242 1.1E-18 T 22-04-2016 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 Gene3D G3DSA:3.30.70.20 177 246 2.6E-7 T 22-04-2016 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 Gene3D G3DSA:1.25.10.10 294 343 1.0E-4 T 22-04-2016 IPR011989 Armadillo-like helical TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 1 333 3.7E-124 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS00975 9de1c5e33957ca8e035c69f768e6d0f4 371 PANTHER PTHR30002 1 358 2.0E-133 T 22-04-2016 TMO_RS12515 41ca95f55edd26f22dc3d0cf83f27df2 573 PANTHER PTHR22773 1 500 4.4E-100 T 22-04-2016 TMO_RS12515 41ca95f55edd26f22dc3d0cf83f27df2 573 Pfam PF00361 Proton-conducting membrane transporter 116 387 9.3E-37 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS12515 41ca95f55edd26f22dc3d0cf83f27df2 573 PANTHER PTHR22773:SF80 1 500 4.4E-100 T 22-04-2016 TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 SUPERFAMILY SSF56399 1305 1336 4.03E-5 T 22-04-2016 TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 Pfam PF05593 RHS Repeat 777 814 1.1E-8 T 22-04-2016 IPR031325 RHS repeat TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1266 1343 2.2E-19 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 955 989 5.5E-6 T 22-04-2016 IPR006530 YD repeat TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 777 814 2.6E-7 T 22-04-2016 IPR006530 YD repeat TMO_RS05700 eb419bb269f7d83d4a3c04b42aa96cd7 1663 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 577 601 2.2E-4 T 22-04-2016 IPR006530 YD repeat TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332:SF18 4 50 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332 79 297 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 Gene3D G3DSA:3.20.20.70 185 306 1.5E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332 4 50 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332:SF18 369 439 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332:SF18 79 297 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 Pfam PF03060 Nitronate monooxygenase 129 356 2.6E-8 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 PANTHER PTHR32332 369 439 5.1E-15 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 SUPERFAMILY SSF51412 25 49 6.77E-7 T 22-04-2016 TMO_RS17865 1e98d7a3af59b88aa67e399766db253c 465 SUPERFAMILY SSF51412 79 317 6.77E-7 T 22-04-2016 TMO_RS21345 f18110b49be8d946e003f72a603cb783 491 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 341 8.8E-137 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 TMO_RS21345 f18110b49be8d946e003f72a603cb783 491 PANTHER PTHR30047 1 491 2.8E-173 T 22-04-2016 TMO_RS21345 f18110b49be8d946e003f72a603cb783 491 ProSitePatterns PS01303 BCCT family of transporters signature. 159 168 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 TMO_RS21345 f18110b49be8d946e003f72a603cb783 491 PANTHER PTHR30047:SF2 1 491 2.8E-173 T 22-04-2016 TMO_RS05650 72359690bbba026404346fb33892698a 135 PANTHER PTHR30435 1 135 2.2E-50 T 22-04-2016 TMO_RS05650 72359690bbba026404346fb33892698a 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 3.8E-44 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 TMO_RS05650 72359690bbba026404346fb33892698a 135 PANTHER PTHR30435:SF2 1 135 2.2E-50 T 22-04-2016 TMO_RS05650 72359690bbba026404346fb33892698a 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site TMO_RS05650 72359690bbba026404346fb33892698a 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 133 5.0E-13 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_RS16480 978d7eb2b349c71b3df3d7def7dc722b 254 PANTHER PTHR40045 3 248 1.6E-47 T 22-04-2016 TMO_RS16480 978d7eb2b349c71b3df3d7def7dc722b 254 Pfam PF08892 YqcI/YcgG family 32 243 5.9E-68 T 22-04-2016 IPR014988 Uncharacterised protein family, YqcI/YcgG TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 533 710 1.7E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SMART SM00304 368 421 1.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PANTHER PTHR32089:SF40 319 403 1.7E-142 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PANTHER PTHR32089:SF40 435 714 1.7E-142 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Gene3D G3DSA:3.30.450.20 221 346 2.1E-6 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF00672 HAMP domain 350 416 2.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Gene3D G3DSA:1.10.287.950 472 681 1.2E-48 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SMART SM00283 457 711 1.1E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SUPERFAMILY SSF58104 463 710 3.01E-65 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 SUPERFAMILY SSF58104 395 423 3.01E-65 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PANTHER PTHR32089 319 403 1.7E-142 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PANTHER PTHR32089 435 714 1.7E-142 T 22-04-2016 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 Pfam PF02743 Cache domain 41 330 1.1E-17 T 22-04-2016 IPR033479 Double Cache domain 1 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 584 613 3.1E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 485 514 3.1E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS03300 f3bf0e55b564b23232c8e5ff0bc2aa71 717 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 632 661 3.1E-7 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS00760 3ddbea8a118d37dbd4146bb85743f5f9 170 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 29 153 3.1E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS00760 3ddbea8a118d37dbd4146bb85743f5f9 170 PANTHER PTHR35011:SF2 4 162 8.4E-20 T 22-04-2016 TMO_RS00760 3ddbea8a118d37dbd4146bb85743f5f9 170 PANTHER PTHR35011 4 162 8.4E-20 T 22-04-2016 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 8 239 4.0E-50 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 Gene3D G3DSA:3.20.20.70 6 246 5.7E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 PANTHER PTHR21139 5 245 2.2E-96 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 SUPERFAMILY SSF51351 5 245 3.01E-83 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 249 37.229 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 Pfam PF00121 Triosephosphate isomerase 8 245 1.0E-77 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS08795 af223e5f7d88a3b1cbfb69e0c912488c 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 PANTHER PTHR13501 6 121 2.1E-41 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 SUPERFAMILY SSF54843 6 124 1.96E-39 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 Pfam PF00237 Ribosomal protein L22p/L17e 21 119 2.3E-28 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 18 119 3.3E-30 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 24.756 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 TMO_RS13230 192b82a6afe918df2a43fc3347e7261b 126 Gene3D G3DSA:3.90.470.10 14 124 8.5E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 TMO_RS11405 54d5be76a14627dde3aea3ff9ad18be0 512 PANTHER PTHR34219 1 508 6.4E-134 T 22-04-2016 TMO_RS11405 54d5be76a14627dde3aea3ff9ad18be0 512 Pfam PF03929 PepSY-associated TM region 9 366 2.2E-53 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS11405 54d5be76a14627dde3aea3ff9ad18be0 512 PANTHER PTHR34219:SF4 1 508 6.4E-134 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PIRSF PIRSF028099 12 493 2.1E-181 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600 270 493 7.1E-132 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600 201 245 7.1E-132 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600 43 120 7.1E-132 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 Gene3D G3DSA:1.10.760.10 352 493 3.8E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600:SF4 270 493 7.1E-132 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600:SF4 43 120 7.1E-132 T 22-04-2016 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 44 493 4.2E-141 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 SUPERFAMILY SSF46626 351 493 2.5E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS06875 339095fb7248d4223fd2ddb6c93b4fd9 493 PANTHER PTHR30600:SF4 201 245 7.1E-132 T 22-04-2016 TMO_RS22850 1878f15a696564d62ea981264ba23075 110 PANTHER PTHR24220:SF150 1 110 8.2E-53 T 22-04-2016 TMO_RS22850 1878f15a696564d62ea981264ba23075 110 PANTHER PTHR24220 1 110 8.2E-53 T 22-04-2016 TMO_RS22850 1878f15a696564d62ea981264ba23075 110 Pfam PF00005 ABC transporter 7 46 1.0E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS22850 1878f15a696564d62ea981264ba23075 110 Gene3D G3DSA:3.40.50.300 2 109 2.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS22850 1878f15a696564d62ea981264ba23075 110 SUPERFAMILY SSF52540 1 110 3.74E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PIRSF PIRSF036934 1 720 3.5E-304 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF00117 Glutamine amidotransferase class-I 534 706 3.6E-33 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Gene3D G3DSA:3.40.50.880 531 716 2.3E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 SUPERFAMILY SSF52317 530 705 1.56E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF04715 Anthranilate synthase component I, N terminal region 45 209 3.6E-9 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PANTHER PTHR11236:SF22 36 588 2.9E-228 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Pfam PF00425 chorismate binding enzyme 251 503 1.6E-65 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 603 614 1.5E-8 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 576 585 1.5E-8 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00096 Glutamine amidotransferase superfamily signature 692 705 1.5E-8 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 692 705 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 532 546 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 649 661 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 576 585 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 628 636 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PRINTS PR00097 Anthranilate synthase component II signature 603 614 3.8E-21 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 PANTHER PTHR11236 36 588 2.9E-228 T 22-04-2016 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 TIGRFAM TIGR01815 TrpE-clade3: anthranilate synthase 12 716 1.1E-295 T 22-04-2016 IPR010112 Anthranilate synthase GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 Gene3D G3DSA:3.60.120.10 40 512 7.4E-117 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS06340 3e0ec5fc3f018f89efe0db43f4a59cd0 720 SUPERFAMILY SSF56322 18 512 6.54E-117 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS14025 9d158f79e803b8ecd1589945808ef42a 160 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 10.782 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS14025 9d158f79e803b8ecd1589945808ef42a 160 Pfam PF00430 ATP synthase B/B' CF(0) 7 136 1.3E-23 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 39 62 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 Pfam PF01084 Ribosomal protein S18 38 86 2.3E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 SUPERFAMILY SSF46911 18 90 1.83E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 22 90 2.1E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 PANTHER PTHR13479 23 89 1.3E-28 T 22-04-2016 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 Gene3D G3DSA:4.10.640.10 26 90 1.6E-31 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 20 91 22.123 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 46 56 7.6E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 64 78 7.6E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 56 63 7.6E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 PRINTS PR00974 Ribosomal protein S18 family signature 78 88 7.6E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS09395 87015abcc6808c5f02d5f167ccbfeebe 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 39 70 2.0E-10 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 Gene3D G3DSA:3.40.640.10 41 268 1.1E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 PANTHER PTHR11751:SF428 2 388 1.3E-144 T 22-04-2016 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 Pfam PF00155 Aminotransferase class I and II 29 380 2.5E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 PANTHER PTHR11751 2 388 1.3E-144 T 22-04-2016 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 Gene3D G3DSA:3.90.1150.10 269 385 1.0E-21 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS10030 74a6c67f4a8d777f571ed9e0de97ac31 395 SUPERFAMILY SSF53383 4 384 2.37E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 PANTHER PTHR30570:SF1 16 282 4.3E-31 T 22-04-2016 TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 Gene3D G3DSA:3.40.190.10 25 165 1.5E-30 T 22-04-2016 TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 PANTHER PTHR30570 16 282 4.3E-31 T 22-04-2016 TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 Gene3D G3DSA:3.40.190.10 166 268 3.0E-4 T 22-04-2016 TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 SUPERFAMILY SSF53850 24 333 7.29E-71 T 22-04-2016 TMO_RS17645 5dbda32df635a7533020aecf0d064872 340 Pfam PF12849 PBP superfamily domain 18 303 3.8E-46 T 22-04-2016 IPR024370 PBP domain TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 PANTHER PTHR14741 191 363 3.7E-38 T 22-04-2016 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 241 362 4.3E-28 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 16 201 1.3E-44 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 Gene3D G3DSA:3.30.950.10 118 216 2.3E-25 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 Pfam PF13847 Methyltransferase domain 264 365 9.7E-7 T 22-04-2016 IPR025714 Methyltransferase domain TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 PANTHER PTHR14741:SF34 191 363 3.7E-38 T 22-04-2016 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 SUPERFAMILY SSF53790 13 214 1.18E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 Gene3D G3DSA:3.40.50.150 235 381 2.0E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 PIRSF PIRSF036428 9 411 2.8E-126 T 22-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 Gene3D G3DSA:3.40.1010.10 12 117 5.8E-23 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 SUPERFAMILY SSF53335 218 407 1.08E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13990 edb7566c42a330171b415751ec8704e7 411 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 200 8.9E-17 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS07500 08c661d25621548628be64bca71c59ce 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 12 188 2.6E-64 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related TMO_RS07500 08c661d25621548628be64bca71c59ce 194 Gene3D G3DSA:1.20.1290.10 71 191 1.2E-35 T 22-04-2016 IPR029032 AhpD-like TMO_RS07500 08c661d25621548628be64bca71c59ce 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 51 134 1.9E-14 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS07500 08c661d25621548628be64bca71c59ce 194 PANTHER PTHR35446 10 194 6.7E-92 T 22-04-2016 TMO_RS07500 08c661d25621548628be64bca71c59ce 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 69 117 1.9E-13 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS07500 08c661d25621548628be64bca71c59ce 194 SUPERFAMILY SSF69118 11 192 1.09E-57 T 22-04-2016 IPR029032 AhpD-like TMO_RS07500 08c661d25621548628be64bca71c59ce 194 PANTHER PTHR35446:SF2 10 194 6.7E-92 T 22-04-2016 TMO_RS07500 08c661d25621548628be64bca71c59ce 194 Gene3D G3DSA:1.20.5.810 19 68 1.0E-28 T 22-04-2016 TMO_RS23310 930908c479713426f5f417fd02df849c 326 PANTHER PTHR10366:SF440 22 283 3.8E-41 T 22-04-2016 TMO_RS23310 930908c479713426f5f417fd02df849c 326 Gene3D G3DSA:3.90.25.10 208 319 1.6E-16 T 22-04-2016 TMO_RS23310 930908c479713426f5f417fd02df849c 326 Gene3D G3DSA:3.40.50.720 22 207 2.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS23310 930908c479713426f5f417fd02df849c 326 SUPERFAMILY SSF51735 22 322 2.71E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS23310 930908c479713426f5f417fd02df849c 326 PANTHER PTHR10366 22 283 3.8E-41 T 22-04-2016 TMO_RS23310 930908c479713426f5f417fd02df849c 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 23 224 1.1E-17 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 Gene3D G3DSA:3.40.50.300 22 256 9.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 SMART SM00382 50 264 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 SUPERFAMILY SSF52540 22 261 1.59E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 Pfam PF00005 ABC transporter 41 189 7.5E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 PANTHER PTHR24220 26 283 4.1E-141 T 22-04-2016 TMO_RS15460 4e9dad6c257a5877248eabda9fc1f12d 283 PANTHER PTHR24220:SF498 26 283 4.1E-141 T 22-04-2016 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 PANTHER PTHR30537:SF3 1 301 4.7E-73 T 22-04-2016 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 Pfam PF03466 LysR substrate binding domain 93 295 6.1E-31 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 Gene3D G3DSA:3.40.190.10 183 263 1.2E-11 T 22-04-2016 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 SUPERFAMILY SSF53850 93 300 1.55E-36 T 22-04-2016 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 Gene3D G3DSA:1.10.10.10 8 89 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 Gene3D G3DSA:3.40.190.10 96 182 4.1E-19 T 22-04-2016 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 SUPERFAMILY SSF46785 7 116 7.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08055 e3277cdcbeb88f910d27e887788503c4 306 PANTHER PTHR30537 1 301 4.7E-73 T 22-04-2016 TMO_RS01855 9ace004977594f990607c61d30097452 397 PANTHER PTHR23501 3 385 1.2E-145 T 22-04-2016 TMO_RS01855 9ace004977594f990607c61d30097452 397 SUPERFAMILY SSF103473 8 382 4.19E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS01855 9ace004977594f990607c61d30097452 397 Pfam PF07690 Major Facilitator Superfamily 14 346 1.3E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS01855 9ace004977594f990607c61d30097452 397 PANTHER PTHR23501:SF4 3 385 1.2E-145 T 22-04-2016 TMO_RS01855 9ace004977594f990607c61d30097452 397 Gene3D G3DSA:1.20.1250.20 206 379 2.0E-10 T 22-04-2016 TMO_RS01855 9ace004977594f990607c61d30097452 397 Gene3D G3DSA:1.20.1250.20 11 186 2.1E-26 T 22-04-2016 TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 PANTHER PTHR30001 1 543 1.3E-172 T 22-04-2016 TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 474 2.7E-139 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 Gene3D G3DSA:2.40.50.140 30 82 5.7E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 Gene3D G3DSA:2.40.50.140 133 175 5.7E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 SUPERFAMILY SSF50249 39 80 3.71E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 SUPERFAMILY SSF50249 131 175 3.71E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS05070 65884d0396ef7a2c026824335474a38a 543 Pfam PF10150 Ribonuclease E/G family 171 440 2.2E-94 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 505 3.8E-129 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 359 378 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 261 287 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 133 157 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 33 52 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 411 428 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 52 68 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PRINTS PR01806 Virulence factor MviN signature 157 178 9.3E-73 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206 506 514 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206 68 77 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206 219 451 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206 118 123 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 Pfam PF03023 MviN-like protein 29 476 4.7E-119 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PIRSF PIRSF002869 1 515 1.4E-153 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206:SF90 506 514 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206:SF90 68 77 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206:SF90 219 451 4.6E-67 T 22-04-2016 TMO_RS17575 a7119e10501300880c40a9a836af2647 518 PANTHER PTHR11206:SF90 118 123 4.6E-67 T 22-04-2016 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 SUPERFAMILY SSF161098 29 291 3.36E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 Gene3D G3DSA:1.10.3720.10 30 285 8.3E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 SUPERFAMILY SSF161098 312 564 1.31E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 283 1.3E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 Gene3D G3DSA:1.10.3720.10 320 569 8.5E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 PANTHER PTHR30183:SF2 436 572 6.5E-220 T 22-04-2016 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 PANTHER PTHR30183:SF2 36 419 6.5E-220 T 22-04-2016 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 PANTHER PTHR30183 436 572 6.5E-220 T 22-04-2016 TMO_RS07715 b9c80b20e7104ae34c35f71934323f5a 575 PANTHER PTHR30183 36 419 6.5E-220 T 22-04-2016 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 PANTHER PTHR11922 3 345 2.6E-111 T 22-04-2016 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 SUPERFAMILY SSF47648 11 76 5.76E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 Gene3D G3DSA:3.40.1030.10 80 342 6.3E-104 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 SUPERFAMILY SSF52418 82 343 5.63E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 Pfam PF02885 Glycosyl transferase family, helical bundle domain 13 73 9.6E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 Gene3D G3DSA:1.20.970.10 13 76 2.7E-25 T 22-04-2016 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 16 339 1.4E-120 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 12 340 38.051 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 Pfam PF00591 Glycosyl transferase family, a/b domain 82 330 2.4E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 TMO_RS08840 f0d399fb1bdc753f4e2abf821ca28431 346 PANTHER PTHR11922:SF5 3 345 2.6E-111 T 22-04-2016 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 Gene3D G3DSA:1.20.1440.90 88 213 4.1E-25 T 22-04-2016 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 210 230 6.7E-9 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 59 74 6.7E-9 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 Pfam PF00311 Phosphoenolpyruvate carboxylase 1 289 2.1E-72 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 PANTHER PTHR30523:SF0 1 292 4.0E-76 T 22-04-2016 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 SUPERFAMILY SSF51621 1 287 6.12E-71 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS19890 a49b6070015d47060df9cecf72a8c7e8 292 PANTHER PTHR30523 1 292 4.0E-76 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 296 2.0E-59 T 22-04-2016 IPR003741 LUD domain TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Gene3D G3DSA:1.10.1060.10 308 398 7.0E-13 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 SUPERFAMILY SSF46548 275 395 2.38E-17 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 PANTHER PTHR32479:SF10 35 471 1.4E-178 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 SUPERFAMILY SSF100950 133 297 7.11E-45 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 SUPERFAMILY SSF100950 63 87 7.11E-45 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF11870 Domain of unknown function (DUF3390) 398 469 5.1E-8 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 314 325 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 PANTHER PTHR32479 35 471 1.4E-178 T 22-04-2016 TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Gene3D G3DSA:3.40.50.10420 63 126 1.0E-51 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Gene3D G3DSA:3.40.50.10420 191 297 1.0E-51 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 Pfam PF13183 4Fe-4S dicluster domain 311 378 2.5E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS17045 a7566ce78cbd737d55ea764bfdbf65ef 493 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 17 455 5.1E-149 T 22-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 TMO_RS11630 2f3a8df2b1afe08979ffd7beafabdd24 175 Gene3D G3DSA:2.60.120.10 108 168 1.8E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS11630 2f3a8df2b1afe08979ffd7beafabdd24 175 Pfam PF07883 Cupin domain 119 167 7.9E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS11630 2f3a8df2b1afe08979ffd7beafabdd24 175 PANTHER PTHR36156:SF2 110 171 1.1E-15 T 22-04-2016 TMO_RS11630 2f3a8df2b1afe08979ffd7beafabdd24 175 PANTHER PTHR36156 110 171 1.1E-15 T 22-04-2016 TMO_RS11630 2f3a8df2b1afe08979ffd7beafabdd24 175 SUPERFAMILY SSF51182 106 170 2.97E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 28.784 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 Gene3D G3DSA:2.70.40.10 3 183 1.5E-63 T 22-04-2016 IPR029054 dUTPase-like TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 PANTHER PTHR11241 1 184 6.5E-73 T 22-04-2016 TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 SUPERFAMILY SSF51283 3 183 1.96E-49 T 22-04-2016 IPR029054 dUTPase-like TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 10 183 1.0E-48 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 PANTHER PTHR11241:SF1 1 184 6.5E-73 T 22-04-2016 TMO_RS05030 651bd59e974182ef5c5338532351aad8 184 Pfam PF00692 dUTPase 78 179 1.7E-5 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 TMO_RS29040 29f97bdfe99edd82262828ce1b34b4b7 198 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 24 128 2.4E-18 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 TMO_RS29040 29f97bdfe99edd82262828ce1b34b4b7 198 Pfam PF09523 Protein of unknown function (DUF2390) 21 129 1.8E-24 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 PANTHER PTHR30136 1 246 6.9E-56 T 22-04-2016 TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 SUPERFAMILY SSF46785 1 73 4.31E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 Pfam PF09339 IclR helix-turn-helix domain 4 54 2.1E-11 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 SUPERFAMILY SSF55781 66 246 1.44E-42 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 Gene3D G3DSA:1.10.10.10 1 71 2.6E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 Gene3D G3DSA:3.30.450.40 72 247 5.0E-46 T 22-04-2016 IPR029016 GAF domain-like TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 Pfam PF01614 Bacterial transcriptional regulator 123 242 7.8E-28 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS29205 168ab77f88b66bc84607eff7e49147fd 255 SMART SM00346 1 91 6.4E-19 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 SMART SM00382 345 489 7.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:1.10.8.60 518 576 1.6E-13 T 22-04-2016 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 Pfam PF00158 Sigma-54 interaction domain 334 492 2.1E-62 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 536 545 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:1.10.10.60 602 650 2.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 Gene3D G3DSA:3.40.50.300 334 498 4.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 635 653 5.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 618 635 5.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 SUPERFAMILY SSF52540 330 567 3.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 PANTHER PTHR32071 593 650 1.1E-116 T 22-04-2016 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 PANTHER PTHR32071 334 575 1.1E-116 T 22-04-2016 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 412 427 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 SUPERFAMILY SSF46689 536 651 6.45E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS14775 e4f0aa1caed8a6be570b06204fad27d7 653 Pfam PF02954 Bacterial regulatory protein, Fis family 622 650 2.9E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 Gene3D G3DSA:1.10.3720.10 9 264 2.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 Gene3D G3DSA:1.10.3720.10 294 545 5.4E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 SUPERFAMILY SSF161098 302 544 1.12E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 SUPERFAMILY SSF161098 3 261 3.66E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 PANTHER PTHR30183 41 556 6.2E-42 T 22-04-2016 TMO_RS16805 3ceac1e669322f1708557b93e73f6cd6 556 PANTHER PTHR30183:SF6 41 556 6.2E-42 T 22-04-2016 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 Gene3D G3DSA:1.10.10.60 277 324 1.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 Gene3D G3DSA:1.10.10.60 220 276 2.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 Pfam PF12852 Cupin 7 207 1.7E-33 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 Gene3D G3DSA:2.60.120.280 55 99 4.4E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 SMART SM00342 239 322 5.5E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 PANTHER PTHR11019:SF77 53 322 4.6E-49 T 22-04-2016 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 PANTHER PTHR11019 53 322 4.6E-49 T 22-04-2016 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 SUPERFAMILY SSF46689 222 272 2.06E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 Pfam PF12833 Helix-turn-helix domain 245 323 1.3E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS17015 0486d5ec97c09d72211576b8e1332431 328 SUPERFAMILY SSF46689 275 323 3.36E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS00480 83d981eb8bd468ba9f158658c6d28009 139 PANTHER PTHR14087 1 138 3.1E-61 T 22-04-2016 TMO_RS00480 83d981eb8bd468ba9f158658c6d28009 139 SUPERFAMILY SSF88697 1 135 2.49E-53 T 22-04-2016 IPR015947 PUA-like domain TMO_RS00480 83d981eb8bd468ba9f158658c6d28009 139 Pfam PF01878 EVE domain 3 131 5.6E-47 T 22-04-2016 IPR002740 EVE domain TMO_RS00480 83d981eb8bd468ba9f158658c6d28009 139 Gene3D G3DSA:3.10.590.10 1 131 8.8E-28 T 22-04-2016 IPR002740 EVE domain TMO_RS09710 9084c7eea3da834530588964ad3e0851 484 PANTHER PTHR30029:SF2 1 483 2.0E-123 T 22-04-2016 TMO_RS09710 9084c7eea3da834530588964ad3e0851 484 Pfam PF04293 SpoVR like protein 5 420 2.5E-142 T 22-04-2016 IPR007390 Sporulation stage V, protein R TMO_RS09710 9084c7eea3da834530588964ad3e0851 484 PANTHER PTHR30029 1 483 2.0E-123 T 22-04-2016 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 253 2.3E-44 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PANTHER PTHR11482 10 362 1.5E-84 T 22-04-2016 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 69 2.0E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 160 173 2.0E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 343 356 2.0E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 36 54 2.0E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 243 262 2.0E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 362 2.1E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 Gene3D G3DSA:2.40.37.10 239 362 1.7E-29 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 SUPERFAMILY SSF51419 9 254 2.33E-48 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01182 Ornithine decarboxylase signature 34 61 2.0E-10 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01182 Ornithine decarboxylase signature 330 343 2.0E-10 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01182 Ornithine decarboxylase signature 309 319 2.0E-10 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PRINTS PR01182 Ornithine decarboxylase signature 274 287 2.0E-10 T 22-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 PANTHER PTHR11482:SF6 10 362 1.5E-84 T 22-04-2016 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 Gene3D G3DSA:3.20.20.10 20 238 5.4E-52 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 SUPERFAMILY SSF50621 222 362 1.82E-32 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 TMO_RS08110 67d8db540ed134b79b0e86a14ab4d4ee 365 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 36 54 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 PANTHER PTHR30111:SF1 31 327 1.1E-52 T 22-04-2016 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 PIRSF PIRSF005261 7 323 4.2E-71 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 Gene3D G3DSA:3.90.1280.10 265 321 1.1E-16 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 SUPERFAMILY SSF118352 265 321 3.4E-14 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 Gene3D G3DSA:3.55.30.10 20 207 1.3E-55 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 PANTHER PTHR30111 31 327 1.1E-52 T 22-04-2016 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 SUPERFAMILY SSF64397 20 273 2.49E-59 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 Pfam PF01430 Hsp33 protein 20 312 3.1E-73 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 TMO_RS00145 202eb59a294354854536415b645ff7bd 327 Gene3D G3DSA:1.10.287.480 217 263 1.4E-10 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 SUPERFAMILY SSF52540 28 295 1.74E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 221 305 1.3E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 PANTHER PTHR24220 5 305 1.3E-121 T 22-04-2016 TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 223 287 5.9E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 SMART SM00382 28 221 9.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 PANTHER PTHR24220:SF535 5 305 1.3E-121 T 22-04-2016 TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 Gene3D G3DSA:3.40.50.300 3 246 1.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05965 e1e2cd7530a07d0e30edecf713abd5fb 309 Pfam PF00005 ABC transporter 21 171 6.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 PANTHER PTHR34182 2 124 2.7E-21 T 22-04-2016 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 1.2E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 Pfam PF03840 Preprotein translocase SecG subunit 4 72 2.2E-17 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_RS08790 6d08ed89018938ab133c140d190f7bb8 141 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 72 5.1E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 Gene3D G3DSA:3.40.710.10 266 618 4.6E-110 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 Pfam PF00912 Transglycosylase 98 263 1.7E-62 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 584 1.1E-32 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 102 618 1.7E-174 T 22-04-2016 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 PANTHER PTHR32282 16 618 9.8E-201 T 22-04-2016 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 SUPERFAMILY SSF56601 245 267 1.51E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 SUPERFAMILY SSF56601 296 624 1.51E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 Gene3D G3DSA:1.10.3810.10 91 265 5.1E-68 T 22-04-2016 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 PANTHER PTHR32282:SF5 16 618 9.8E-201 T 22-04-2016 TMO_RS00040 491aaa14ea487461c047d23feea249c0 697 SUPERFAMILY SSF53955 82 282 6.75E-71 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 7.7E-37 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Gene3D G3DSA:3.40.50.1220 183 309 8.7E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Gene3D G3DSA:3.40.50.620 1 180 2.7E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 Pfam PF01012 Electron transfer flavoprotein domain 3 168 3.2E-38 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SUPERFAMILY SSF52467 186 308 2.59E-50 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 PANTHER PTHR10909 103 306 4.3E-120 T 22-04-2016 TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 PANTHER PTHR10909:SF294 103 306 4.3E-120 T 22-04-2016 TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SMART SM00893 3 181 4.0E-54 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 SUPERFAMILY SSF52402 3 182 5.37E-53 T 22-04-2016 TMO_RS00645 5ff5d4c3be9b7b8dc6876445cfdea84f 310 PIRSF PIRSF000089 1 310 4.6E-108 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 PANTHER PTHR30085 66 366 2.2E-140 T 22-04-2016 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 PANTHER PTHR30085:SF3 66 366 2.2E-140 T 22-04-2016 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 253 1.0E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 Gene3D G3DSA:1.10.3720.10 153 361 1.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 175 359 3.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12655 279b61d2bb73ec2dae63e56e038d3fc3 367 SUPERFAMILY SSF161098 155 347 1.96E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 PANTHER PTHR11560 6 170 2.3E-58 T 22-04-2016 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 168 5.0E-8 T 22-04-2016 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 SUPERFAMILY SSF160369 3 168 2.22E-56 T 22-04-2016 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 26.254 T 22-04-2016 IPR022973 Ribosomal protein L10 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 Pfam PF00466 Ribosomal protein L10 3 98 1.3E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 TMO_RS13305 62fe13f24a78c3bee16d657d46675f2c 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 PANTHER PTHR11839:SF13 10 153 5.4E-40 T 22-04-2016 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 Gene3D G3DSA:3.90.79.10 8 153 6.4E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 Pfam PF00293 NUDIX domain 10 148 1.5E-24 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 PANTHER PTHR11839 10 153 5.4E-40 T 22-04-2016 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 PRINTS PR00502 NUDIX hydrolase family signature 38 52 2.3E-6 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 PRINTS PR00502 NUDIX hydrolase family signature 52 67 2.3E-6 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 4 158 35.43 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH TMO_RS15010 e06d9684ab715beb7bfc9c4ed46c06b8 158 SUPERFAMILY SSF55811 8 153 2.57E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PANTHER PTHR24321:SF6 2 248 1.0E-49 T 22-04-2016 TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PANTHER PTHR24321 2 248 1.0E-49 T 22-04-2016 TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 Gene3D G3DSA:3.40.50.720 1 248 4.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.4E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 SUPERFAMILY SSF51735 1 248 8.41E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 0.0027 T 22-04-2016 TMO_RS12540 a8ca1430356b6d2f5a7254c33533f8d3 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 4.3E-57 T 22-04-2016 TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 SUPERFAMILY SSF53850 1 164 3.08E-47 T 22-04-2016 TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 PANTHER PTHR30290:SF14 1 166 7.0E-47 T 22-04-2016 TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 PANTHER PTHR30290 1 166 7.0E-47 T 22-04-2016 TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 149 3.6E-39 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 Gene3D G3DSA:3.90.76.10 1 47 5.9E-11 T 22-04-2016 TMO_RS25095 164e03bf336dd9a8fc108030eff18f56 166 Gene3D G3DSA:3.40.190.10 48 161 7.5E-37 T 22-04-2016 TMO_RS02845 43c305a9aea58ff3bb694c89d636dfc7 434 PANTHER PTHR33362:SF2 5 356 9.5E-87 T 22-04-2016 TMO_RS02845 43c305a9aea58ff3bb694c89d636dfc7 434 PIRSF PIRSF006066 2 366 3.2E-101 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS02845 43c305a9aea58ff3bb694c89d636dfc7 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 365 4.6E-84 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS02845 43c305a9aea58ff3bb694c89d636dfc7 434 PANTHER PTHR33362 5 356 9.5E-87 T 22-04-2016 TMO_RS02845 43c305a9aea58ff3bb694c89d636dfc7 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 365 8.4E-94 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS02915 f8cb6277086a284f5dfb137970ed48c9 146 SUPERFAMILY SSF54637 17 145 1.85E-13 T 22-04-2016 IPR029069 HotDog domain TMO_RS02915 f8cb6277086a284f5dfb137970ed48c9 146 Gene3D G3DSA:3.10.129.10 30 145 3.9E-10 T 22-04-2016 IPR029069 HotDog domain TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 418 5.0E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 PIRSF PIRSF500134 1 436 2.9E-185 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF48179 201 299 6.46E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:3.40.50.720 232 434 4.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 PANTHER PTHR11374:SF18 1 438 2.7E-239 T 22-04-2016 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 184 8.5E-67 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 SMART SM00984 317 418 8.9E-49 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 PANTHER PTHR11374 1 438 2.7E-239 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 201 293 3.7E-37 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:1.20.5.100 204 231 1.6E-19 T 22-04-2016 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF51735 1 188 4.89E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 414 3.8E-138 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 Gene3D G3DSA:3.40.50.720 1 203 4.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 SUPERFAMILY SSF52413 303 428 1.18E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 TMO_RS02945 32dd428903cce94a9042a2e32fc55a3f 439 PIRSF PIRSF000124 1 433 1.0E-143 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 TMO_RS11615 9b3e0684bd917904e3669712b84df38c 339 PANTHER PTHR33376 1 338 3.1E-44 T 22-04-2016 TMO_RS11615 9b3e0684bd917904e3669712b84df38c 339 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 317 8.0E-38 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS17870 84929ad7af32043edc70b59bf8e31ef6 136 PANTHER PTHR33202 3 136 1.6E-42 T 22-04-2016 TMO_RS17870 84929ad7af32043edc70b59bf8e31ef6 136 Gene3D G3DSA:1.10.10.10 9 89 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17870 84929ad7af32043edc70b59bf8e31ef6 136 PANTHER PTHR33202:SF3 3 136 1.6E-42 T 22-04-2016 TMO_RS17870 84929ad7af32043edc70b59bf8e31ef6 136 Pfam PF01475 Ferric uptake regulator family 17 112 2.4E-22 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 TMO_RS17870 84929ad7af32043edc70b59bf8e31ef6 136 SUPERFAMILY SSF46785 10 132 1.07E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 SUPERFAMILY SSF47413 10 79 4.79E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 SMART SM00530 17 72 1.5E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 Gene3D G3DSA:2.60.120.10 97 187 9.7E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 Gene3D G3DSA:1.10.260.40 10 79 2.3E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 PANTHER PTHR10245:SF21 10 189 4.8E-50 T 22-04-2016 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 Pfam PF13560 Helix-turn-helix domain 13 70 3.7E-12 T 22-04-2016 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 PANTHER PTHR10245 10 189 4.8E-50 T 22-04-2016 TMO_RS03725 96df0361012890feec3ce7baf7292c17 189 SUPERFAMILY SSF51182 66 188 1.46E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 SUPERFAMILY SSF46785 1 97 2.72E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 Gene3D G3DSA:3.40.190.10 171 251 3.8E-14 T 22-04-2016 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 Gene3D G3DSA:1.10.10.10 1 79 6.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 Gene3D G3DSA:3.40.190.10 84 170 5.2E-16 T 22-04-2016 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 PANTHER PTHR30346 1 291 1.9E-45 T 22-04-2016 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 Pfam PF03466 LysR substrate binding domain 81 257 5.3E-27 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 2.4E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08635 86cf9cd1e54a673803580e9c348d40b4 292 SUPERFAMILY SSF53850 83 276 2.17E-23 T 22-04-2016 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 PANTHER PTHR13847 1 375 1.3E-35 T 22-04-2016 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Pfam PF01266 FAD dependent oxidoreductase 4 350 1.2E-43 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 SUPERFAMILY SSF51905 3 215 5.18E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 SUPERFAMILY SSF51905 312 367 5.18E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.30.9.10 80 139 2.1E-4 T 22-04-2016 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.30.9.10 215 256 2.1E-4 T 22-04-2016 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.50.50.60 2 79 3.7E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.50.50.60 312 363 3.7E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05185 0290d986c6dc454cc0c230602452c126 381 Gene3D G3DSA:3.50.50.60 140 214 3.7E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 45 2.3E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 PANTHER PTHR30328:SF4 1 181 5.7E-22 T 22-04-2016 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 SUPERFAMILY SSF46689 1 69 1.69E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 PANTHER PTHR30328 1 181 5.7E-22 T 22-04-2016 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 Gene3D G3DSA:1.10.357.10 1 178 3.9E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS06580 f603559fba559f5ed1d426cd4510a128 189 SUPERFAMILY SSF48498 67 176 7.79E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 85 96 1.1E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 165 178 1.1E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 155 1.1E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 PANTHER PTHR21581 54 314 7.1E-68 T 22-04-2016 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 Pfam PF05036 Sporulation related domain 434 514 3.3E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 SUPERFAMILY SSF56601 40 295 5.13E-71 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 Gene3D G3DSA:3.40.710.10 39 295 3.6E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 59 277 1.1E-62 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TMO_RS02970 c26c7503412c4aa71693eb20017aa46f 524 PANTHER PTHR21581:SF3 54 314 7.1E-68 T 22-04-2016 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 PANTHER PTHR30204 3 129 2.5E-44 T 22-04-2016 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 Pfam PF09278 MerR, DNA binding 44 108 1.1E-20 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 SMART SM00422 1 70 4.4E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 Gene3D G3DSA:1.10.1660.10 1 55 5.2E-23 T 22-04-2016 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 SUPERFAMILY SSF46955 1 126 5.13E-37 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 Pfam PF00376 MerR family regulatory protein 2 39 8.5E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.2E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.2E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.2E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 PANTHER PTHR30204:SF16 3 129 2.5E-44 T 22-04-2016 TMO_RS08825 685b5a9506e001a8b52f785525a25b8f 151 Gene3D G3DSA:1.10.1660.10 56 130 2.4E-30 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:2.120.10.90 527 728 4.0E-22 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 SMART SM00434 17 488 3.9E-225 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 14 770 7.4E-249 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 SUPERFAMILY SSF56719 37 505 8.24E-148 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 771 31.148 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 483 2.2E-133 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:3.90.199.10 360 424 1.9E-103 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:3.90.199.10 37 261 1.9E-103 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169 14 213 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169 233 505 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169 528 596 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169:SF48 14 213 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169:SF48 233 505 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 PANTHER PTHR10169:SF48 528 596 1.7E-183 T 22-04-2016 TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 Gene3D G3DSA:3.30.1360.40 262 358 1.4E-27 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain TMO_RS08065 af73b8634638f4385659a9cef23f7498 772 SUPERFAMILY SSF101904 529 769 1.83E-41 T 22-04-2016 TMO_RS09515 8e660a2a093d38103fcf164b18aa3116 97 PIRSF PIRSF028291 1 96 5.5E-25 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS09515 8e660a2a093d38103fcf164b18aa3116 97 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 5 93 6.1E-28 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS15380 d4770a93ad0560a4a2e0bb262022717a 505 PANTHER PTHR22726 55 298 7.5E-57 T 22-04-2016 TMO_RS15380 d4770a93ad0560a4a2e0bb262022717a 505 Gene3D G3DSA:3.30.2010.10 81 163 3.7E-20 T 22-04-2016 TMO_RS15380 d4770a93ad0560a4a2e0bb262022717a 505 Pfam PF01435 Peptidase family M48 85 269 4.4E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_RS15380 d4770a93ad0560a4a2e0bb262022717a 505 PANTHER PTHR22726:SF9 55 298 7.5E-57 T 22-04-2016 TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF01011 PQQ enzyme repeat 443 472 4.5E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 228 259 0.0066 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 726 759 8.3 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SMART SM00564 343 384 26.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SUPERFAMILY SSF50998 172 525 3.79E-147 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SUPERFAMILY SSF50998 654 803 3.79E-147 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 SUPERFAMILY SSF50998 561 627 3.79E-147 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 20 803 4.1E-294 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 PANTHER PTHR32303 581 804 5.8E-133 T 22-04-2016 TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 PANTHER PTHR32303 135 511 5.8E-133 T 22-04-2016 TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF13360 PQQ-like domain 228 382 9.4E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 Pfam PF13360 PQQ-like domain 682 771 4.1E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 Gene3D G3DSA:2.140.10.10 145 537 8.2E-143 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 Gene3D G3DSA:2.140.10.10 572 804 8.2E-143 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 PANTHER PTHR32303:SF4 581 804 5.8E-133 T 22-04-2016 TMO_RS09550 eaab29e61aa4ed236a47d9dec96d6c21 805 PANTHER PTHR32303:SF4 135 511 5.8E-133 T 22-04-2016 TMO_RS01215 8bd0e11353447b55faf935689bf3639f 295 SUPERFAMILY SSF53474 56 292 6.55E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01215 8bd0e11353447b55faf935689bf3639f 295 Pfam PF01738 Dienelactone hydrolase family 67 292 8.8E-56 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 TMO_RS01215 8bd0e11353447b55faf935689bf3639f 295 PANTHER PTHR17630 64 292 1.5E-88 T 22-04-2016 TMO_RS01215 8bd0e11353447b55faf935689bf3639f 295 PANTHER PTHR17630:SF42 64 292 1.5E-88 T 22-04-2016 TMO_RS01215 8bd0e11353447b55faf935689bf3639f 295 Gene3D G3DSA:3.40.50.1820 56 292 6.8E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:3.40.50.740 74 136 2.5E-80 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:3.40.50.740 319 543 2.5E-80 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:3.40.228.10 137 318 6.9E-42 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 1.6E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:2.20.25.90 10 60 2.0E-17 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 12 30 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Pfam PF00384 Molybdopterin oxidoreductase 80 482 2.8E-62 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 PANTHER PTHR11615:SF119 1 709 1.1E-194 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 59 1.8E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 SUPERFAMILY SSF53706 9 551 1.31E-159 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 Gene3D G3DSA:2.40.40.20 567 691 4.9E-36 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 SUPERFAMILY SSF50692 565 702 2.71E-36 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain TMO_RS10820 841c8002edbd329a8958296147fd8442 840 PANTHER PTHR11615 1 709 1.1E-194 T 22-04-2016 TMO_RS10820 841c8002edbd329a8958296147fd8442 840 SMART SM00926 7 62 2.0E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 TMO_RS00680 c85a86fceb6560d10d7edad7591a1cad 219 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 1 36 7.8E-16 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative TMO_RS00680 c85a86fceb6560d10d7edad7591a1cad 219 Pfam PF13717 zinc-ribbon domain 1 36 3.5E-15 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 PANTHER PTHR30203:SF3 2 486 1.2E-106 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Pfam PF02321 Outer membrane efflux protein 302 482 2.2E-31 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Pfam PF02321 Outer membrane efflux protein 83 269 1.0E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:2.20.200.10 334 369 5.4E-17 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:2.20.200.10 118 156 5.4E-17 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 SUPERFAMILY SSF56954 73 487 1.28E-113 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 SUPERFAMILY SSF56954 16 41 1.28E-113 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:1.20.1600.10 157 333 4.3E-104 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:1.20.1600.10 371 485 4.3E-104 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 Gene3D G3DSA:1.20.1600.10 70 108 4.3E-104 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 PANTHER PTHR30203 2 486 1.2E-106 T 22-04-2016 TMO_RS13435 908a747a470433e580d8bff2066acc5f 508 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 484 7.5E-114 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 SMART SM00903 21 168 7.3E-43 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 Gene3D G3DSA:2.30.110.10 10 167 1.3E-43 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 Pfam PF01613 Flavin reductase like domain 22 169 1.3E-32 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 PANTHER PTHR30466:SF7 12 166 1.0E-43 T 22-04-2016 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 SUPERFAMILY SSF50475 17 169 2.26E-40 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS10250 0f28c6f003baff5c09fe200ee5ae3f51 179 PANTHER PTHR30466 12 166 1.0E-43 T 22-04-2016 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 Gene3D G3DSA:3.40.30.10 21 144 2.7E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 SUPERFAMILY SSF52833 3 142 6.33E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 PIRSF PIRSF006402 1 686 4.2E-191 T 22-04-2016 IPR024705 Spermatogenesis-associated protein 20 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 PANTHER PTHR12145:SF11 4 688 4.5E-227 T 22-04-2016 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 PANTHER PTHR12145 4 688 4.5E-227 T 22-04-2016 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 Gene3D G3DSA:1.50.10.10 392 571 6.0E-12 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 Pfam PF03190 Protein of unknown function, DUF255 4 161 2.6E-72 T 22-04-2016 IPR004879 Domain of unknown function DUF255 TMO_RS17185 520ea906c8d309e86ddff6134232f6ff 688 SUPERFAMILY SSF48208 191 542 2.62E-54 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 194 207 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 SMART SM00917 364 494 4.7E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 2 490 3.1E-215 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 PANTHER PTHR10277:SF9 2 502 2.7E-247 T 22-04-2016 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 365 493 8.0E-32 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 Pfam PF00682 HMGL-like 2 268 3.4E-97 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 SUPERFAMILY SSF51569 2 286 3.76E-100 T 22-04-2016 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 7 23 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 Gene3D G3DSA:3.20.20.70 2 342 3.2E-147 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 503 40.961 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 SUPERFAMILY SSF110921 394 491 2.22E-20 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS03840 de345b517ddba729ecfed42f9be4a91b 514 PANTHER PTHR10277 2 502 2.7E-247 T 22-04-2016 TMO_RS00590 44047a089d0c51fcbe2f84248b128e3a 136 Pfam PF09391 Protein of unknown function (DUF2000) 5 135 3.4E-40 T 22-04-2016 IPR018988 Protein of unknown function DUF2000 TMO_RS00590 44047a089d0c51fcbe2f84248b128e3a 136 Gene3D G3DSA:3.40.1490.10 2 136 2.1E-53 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 TMO_RS00590 44047a089d0c51fcbe2f84248b128e3a 136 SUPERFAMILY SSF102462 3 136 9.94E-43 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 9.9E-15 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 SUPERFAMILY SSF46785 3 163 1.92E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 PANTHER PTHR33169:SF4 8 133 5.6E-26 T 22-04-2016 TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 PANTHER PTHR33169 8 133 5.6E-26 T 22-04-2016 TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 Pfam PF10400 Virulence activator alpha C-term 92 157 1.9E-7 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal TMO_RS05870 39d4bd7597f2787d0421451f5083023b 185 Gene3D G3DSA:1.10.10.10 1 83 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 PANTHER PTHR21043 15 119 6.2E-36 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 11 113 23.889 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 16 112 9.8E-33 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 Gene3D G3DSA:3.30.460.10 12 113 1.3E-35 T 22-04-2016 TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 SUPERFAMILY SSF81301 11 114 2.62E-34 T 22-04-2016 TMO_RS14975 6629811b3026ff7f9637a918c74f2939 126 Pfam PF02410 Ribosomal silencing factor during starvation 20 112 4.3E-27 T 22-04-2016 TMO_RS29255 198df58f87e54f864c68b7c98ad0d9fb 318 PANTHER PTHR33643 57 315 1.1E-33 T 22-04-2016 TMO_RS29255 198df58f87e54f864c68b7c98ad0d9fb 318 Pfam PF01774 UreD urease accessory protein 59 292 9.1E-40 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 TMO_RS29255 198df58f87e54f864c68b7c98ad0d9fb 318 Hamap MF_01384 Urease accessory protein UreD [ureD]. 12 302 22.751 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 TMO_RS29255 198df58f87e54f864c68b7c98ad0d9fb 318 PANTHER PTHR33643:SF1 57 315 1.1E-33 T 22-04-2016 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 SUPERFAMILY SSF161098 93 159 1.29E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 SUPERFAMILY SSF161098 198 320 1.29E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 Gene3D G3DSA:1.10.3720.10 201 330 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 Gene3D G3DSA:1.10.3720.10 90 162 1.7E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 335 1.3E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 PANTHER PTHR30465 12 168 3.5E-102 T 22-04-2016 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 PANTHER PTHR30465 192 335 3.5E-102 T 22-04-2016 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 PANTHER PTHR30465:SF0 12 168 3.5E-102 T 22-04-2016 TMO_RS07135 8a6de307d9c8f58bee261347b10ca7c1 339 PANTHER PTHR30465:SF0 192 335 3.5E-102 T 22-04-2016 TMO_RS04265 f13ed40af2682444aa945080d32523f8 72 Pfam PF08808 RES domain 8 66 1.4E-6 T 22-04-2016 IPR014914 RES domain TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF01179 Copper amine oxidase, enzyme domain 225 626 1.2E-157 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF49998 214 630 7.06E-156 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF02728 Copper amine oxidase, N3 domain 102 203 2.7E-19 T 22-04-2016 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 PANTHER PTHR10638:SF18 7 633 2.4E-256 T 22-04-2016 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF54416 13 101 6.69E-15 T 22-04-2016 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Pfam PF02727 Copper amine oxidase, N2 domain 16 91 2.7E-7 T 22-04-2016 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:2.70.98.20 196 633 2.4E-173 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:3.10.450.40 14 104 1.4E-16 T 22-04-2016 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 SUPERFAMILY SSF54416 102 214 8.14E-35 T 22-04-2016 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 370 383 - T 22-04-2016 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 Gene3D G3DSA:3.10.450.40 105 195 8.9E-35 T 22-04-2016 TMO_RS16845 848c4c7659ee21b5b1984c404168bb6b 640 PANTHER PTHR10638 7 633 2.4E-256 T 22-04-2016 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 Gene3D G3DSA:3.40.800.20 3 310 8.5E-105 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 Pfam PF00850 Histone deacetylase domain 20 308 1.3E-84 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 PANTHER PTHR10625:SF104 9 309 8.0E-102 T 22-04-2016 TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 SUPERFAMILY SSF52768 1 309 1.82E-100 T 22-04-2016 TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 PANTHER PTHR10625 9 309 8.0E-102 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 2.5E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 238 248 2.5E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS04840 d69193b2e87baa3180795400a8e7c3f7 312 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 2.5E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 PANTHER PTHR30290 26 496 1.9E-132 T 22-04-2016 TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 401 2.4E-93 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 Gene3D G3DSA:3.10.105.10 268 463 8.1E-49 T 22-04-2016 TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 PIRSF PIRSF002741 8 496 6.1E-107 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 PANTHER PTHR30290:SF14 26 496 1.9E-132 T 22-04-2016 TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 Gene3D G3DSA:3.90.76.10 38 192 2.0E-44 T 22-04-2016 TMO_RS01525 e29c239ed22cce5b841771ee9c10e29f 496 SUPERFAMILY SSF53850 27 494 1.74E-133 T 22-04-2016 TMO_RS15300 182c08f846865670fb358cd6b0ca34a2 122 SUPERFAMILY SSF55298 11 121 1.88E-30 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS15300 182c08f846865670fb358cd6b0ca34a2 122 PANTHER PTHR11803 17 120 2.5E-28 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family TMO_RS15300 182c08f846865670fb358cd6b0ca34a2 122 Gene3D G3DSA:3.30.1330.40 16 121 2.7E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS15300 182c08f846865670fb358cd6b0ca34a2 122 Pfam PF01042 Endoribonuclease L-PSP 17 119 1.7E-22 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 Pfam PF01668 SmpB protein 13 75 1.9E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 71.861 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 PANTHER PTHR30308 1 156 3.1E-76 T 22-04-2016 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 4.0E-33 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 SUPERFAMILY SSF74982 12 137 6.54E-51 T 22-04-2016 IPR023620 Small protein B TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 154 1.9E-55 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 PANTHER PTHR30308:SF2 1 156 3.1E-76 T 22-04-2016 TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 Gene3D G3DSA:2.40.280.10 13 132 1.3E-51 T 22-04-2016 IPR023620 Small protein B TMO_RS07970 34f75e360961ffbca360710e1f49f3cf 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 Gene3D G3DSA:3.40.50.720 5 256 4.1E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.9E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 197 5.7E-4 T 22-04-2016 TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 SUPERFAMILY SSF51735 6 256 1.99E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.6E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PANTHER PTHR24321 5 256 1.8E-46 T 22-04-2016 TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 8.8E-54 T 22-04-2016 TMO_RS14315 9f8c0ecbb42b913b46f607e8d99669bf 257 PANTHER PTHR24321:SF6 5 256 1.8E-46 T 22-04-2016 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 PANTHER PTHR11908:SF68 4 265 7.6E-78 T 22-04-2016 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.465.10 58 166 5.1E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.43.10 1 51 3.7E-20 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 SMART SM01092 171 264 5.1E-18 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 SUPERFAMILY SSF56176 1 167 1.06E-54 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 Gene3D G3DSA:3.30.390.50 172 265 1.8E-16 T 22-04-2016 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 1.5E-49 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 SUPERFAMILY SSF55447 170 265 3.45E-19 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal TMO_RS05915 792032a112ce6fd2578332ec36b2dd2b 266 PANTHER PTHR11908 4 265 7.6E-78 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 Gene3D G3DSA:1.10.10.10 3 86 1.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 PANTHER PTHR30537 1 305 1.5E-115 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 Gene3D G3DSA:3.40.190.10 180 273 3.8E-20 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 PANTHER PTHR30537:SF29 1 305 1.5E-115 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 SUPERFAMILY SSF53850 89 306 2.17E-37 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 Gene3D G3DSA:3.40.190.10 93 179 6.6E-19 T 22-04-2016 TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 SUPERFAMILY SSF46785 3 86 9.58E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09025 a2611a354b10d56edb89adf5db8dafdb 319 Pfam PF03466 LysR substrate binding domain 88 305 3.2E-36 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 133 4.4E-50 T 22-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 117 3.8E-22 T 22-04-2016 TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 Gene3D G3DSA:3.10.180.10 1 133 2.4E-46 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 PANTHER PTHR21366:SF9 1 133 3.1E-67 T 22-04-2016 TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 SUPERFAMILY SSF54593 1 133 1.61E-37 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09860 719b5ea3598895c77162e9d6e2aa8905 134 PANTHER PTHR21366 1 133 3.1E-67 T 22-04-2016 TMO_RS06535 721e6ad0be15d560f2345f11afa110b7 209 Gene3D G3DSA:1.10.357.10 25 206 4.6E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS06535 721e6ad0be15d560f2345f11afa110b7 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 72 1.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06535 721e6ad0be15d560f2345f11afa110b7 209 PANTHER PTHR30055 11 154 2.3E-16 T 22-04-2016 TMO_RS06535 721e6ad0be15d560f2345f11afa110b7 209 SUPERFAMILY SSF46689 19 89 2.79E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04105 f1ed2bf581e058103d2fd3ee61073fb0 90 Pfam PF13937 Domain of unknown function (DUF4212) 12 87 8.0E-30 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted TMO_RS04105 f1ed2bf581e058103d2fd3ee61073fb0 90 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 14 89 6.9E-29 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted TMO_RS01845 d0292e3f21adff9c39f24b988fdcd3cb 135 Pfam PF03788 LrgA family 29 122 2.9E-23 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 TMO_RS01845 d0292e3f21adff9c39f24b988fdcd3cb 135 PANTHER PTHR33931 10 133 3.5E-37 T 22-04-2016 TMO_RS01845 d0292e3f21adff9c39f24b988fdcd3cb 135 PANTHER PTHR33931:SF3 10 133 3.5E-37 T 22-04-2016 TMO_RS16440 9810d5d518c3d43dc3770f62e46b5334 435 PANTHER PTHR33362 1 435 5.0E-107 T 22-04-2016 TMO_RS16440 9810d5d518c3d43dc3770f62e46b5334 435 PANTHER PTHR33362:SF5 1 435 5.0E-107 T 22-04-2016 TMO_RS16440 9810d5d518c3d43dc3770f62e46b5334 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 431 9.0E-97 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS16440 9810d5d518c3d43dc3770f62e46b5334 435 PIRSF PIRSF006066 5 435 1.5E-89 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS16440 9810d5d518c3d43dc3770f62e46b5334 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 425 3.5E-87 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 Gene3D G3DSA:3.40.190.10 6 126 7.0E-41 T 22-04-2016 TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 Gene3D G3DSA:3.40.190.10 262 321 7.0E-41 T 22-04-2016 TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 Gene3D G3DSA:3.40.190.10 130 261 1.5E-30 T 22-04-2016 TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 PANTHER PTHR30006 5 325 5.1E-46 T 22-04-2016 TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 PIRSF PIRSF002825 1 321 4.7E-53 T 22-04-2016 IPR026045 Ferric binding protein TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 Pfam PF13343 Bacterial extracellular solute-binding protein 80 303 5.9E-25 T 22-04-2016 TMO_RS14635 83ca0742158de84299daf9f2c843c457 327 SUPERFAMILY SSF53850 24 308 3.0E-58 T 22-04-2016 TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 SUPERFAMILY SSF52141 21 234 1.24E-44 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 SMART SM00986 47 227 1.1E-31 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 SMART SM00987 47 227 1.1E-31 T 22-04-2016 TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 PANTHER PTHR33693 14 243 2.7E-62 T 22-04-2016 TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 PANTHER PTHR33693:SF2 14 243 2.7E-62 T 22-04-2016 TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 Gene3D G3DSA:3.40.470.10 20 232 2.8E-49 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS07980 957aa4b774f62870c7d25e474548b42e 243 Pfam PF03167 Uracil DNA glycosylase superfamily 48 228 7.2E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS10220 dbdb65ab5ec6a50a675279716fc22c85 254 SUPERFAMILY SSF52096 3 250 1.06E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS10220 dbdb65ab5ec6a50a675279716fc22c85 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 245 3.7E-47 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS10220 dbdb65ab5ec6a50a675279716fc22c85 254 PANTHER PTHR11941 1 252 1.8E-50 T 22-04-2016 TMO_RS10220 dbdb65ab5ec6a50a675279716fc22c85 254 Gene3D G3DSA:3.90.226.10 9 247 1.2E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 SUPERFAMILY SSF50249 2 123 9.42E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 Gene3D G3DSA:2.40.50.140 1 123 1.1E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.92 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.7E-69 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PANTHER PTHR11652 1 116 7.3E-75 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 Pfam PF00164 Ribosomal protein S12/S23 14 123 1.9E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PIRSF PIRSF002133 1 123 3.5E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS13280 9bf27cab6d90b95a3e155e1f71f1cd15 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 8.3E-62 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 PANTHER PTHR33162:SF4 1 154 1.2E-22 T 22-04-2016 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 PANTHER PTHR33162 1 154 1.2E-22 T 22-04-2016 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 71 1.1E-23 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 147 16.17 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 Pfam PF02416 mttA/Hcf106 family 4 49 1.6E-6 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.8E-17 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.8E-17 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 TMO_RS07730 817318cdfd7756f3d08bf88c7e123a18 168 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.8E-17 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 TMO_RS10315 37d4b719faff6f7bb10cbc6ddd1996ea 304 PANTHER PTHR11795:SF371 1 304 2.8E-132 T 22-04-2016 TMO_RS10315 37d4b719faff6f7bb10cbc6ddd1996ea 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 288 1.9E-53 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS10315 37d4b719faff6f7bb10cbc6ddd1996ea 304 PANTHER PTHR11795 1 304 2.8E-132 T 22-04-2016 TMO_RS02645 0038709b5d66dda1463e2a7f8e77e79d 206 Pfam PF02230 Phospholipase/Carboxylesterase 3 198 2.3E-28 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 TMO_RS02645 0038709b5d66dda1463e2a7f8e77e79d 206 SUPERFAMILY SSF53474 4 198 1.74E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS02645 0038709b5d66dda1463e2a7f8e77e79d 206 PANTHER PTHR10655 3 188 3.5E-33 T 22-04-2016 TMO_RS02645 0038709b5d66dda1463e2a7f8e77e79d 206 Gene3D G3DSA:3.40.50.1820 3 198 1.3E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10950 724635a3b8bc485a9a9ee8aa18a77dd9 596 SUPERFAMILY SSF56024 251 403 1.41E-5 T 22-04-2016 TMO_RS10950 724635a3b8bc485a9a9ee8aa18a77dd9 596 Gene3D G3DSA:3.30.870.10 264 405 4.8E-6 T 22-04-2016 TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 83 376 1.6E-72 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 SUPERFAMILY SSF51556 79 303 2.49E-66 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 SUPERFAMILY SSF51556 333 381 2.49E-66 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 Gene3D G3DSA:3.20.20.140 83 382 1.1E-76 T 22-04-2016 TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 PANTHER PTHR10443 336 385 8.5E-52 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 TMO_RS09050 07d9099687092161b04e08e0fb57e364 387 PANTHER PTHR10443 119 304 8.5E-52 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.3E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 Pfam PF01245 Ribosomal protein L19 2 117 3.6E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 32.087 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 1.8E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 PIRSF PIRSF002191 1 125 2.2E-55 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 PANTHER PTHR15680 2 121 1.8E-57 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS16395 702838e81ec402ef631087f690ff2dca 126 SUPERFAMILY SSF50104 1 119 1.6E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.197 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 Gene3D G3DSA:3.40.1180.10 14 241 2.0E-92 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 PANTHER PTHR10291 15 240 1.3E-111 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 2.3E-77 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 15 240 5.6E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 TMO_RS08935 b8e7fa46b87a192711b56487fbd3df08 242 SUPERFAMILY SSF64005 15 235 4.84E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 TMO_RS03305 9e0bd12277a67794e7dc59699839fe93 193 Pfam PF09335 SNARE associated Golgi protein 51 153 6.7E-11 T 22-04-2016 IPR032816 SNARE associated Golgi protein TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 PANTHER PTHR34772:SF1 3 88 5.6E-37 T 22-04-2016 TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 PANTHER PTHR34772 3 88 5.6E-37 T 22-04-2016 TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 SUPERFAMILY SSF50182 8 71 7.71E-25 T 22-04-2016 IPR010920 LSM domain TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 5 67 29.303 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 67 1.1E-32 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 TMO_RS08540 a6b58e7b0320f1c8a004670adf02a2b8 89 Gene3D G3DSA:2.30.30.100 4 77 2.3E-36 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 Pfam PF00672 HAMP domain 181 250 4.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PANTHER PTHR32089 155 236 1.2E-90 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PANTHER PTHR32089 265 547 1.2E-90 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 SMART SM00283 290 544 3.9E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 494 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 20 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 417 446 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 388 415 2.8E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 SMART SM00304 201 254 4.0E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 SUPERFAMILY SSF58104 229 256 2.22E-58 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 SUPERFAMILY SSF58104 296 543 2.22E-58 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 Gene3D G3DSA:1.10.287.950 308 514 2.9E-46 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PANTHER PTHR32089:SF56 155 236 1.2E-90 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 PANTHER PTHR32089:SF56 265 547 1.2E-90 T 22-04-2016 TMO_RS12570 1d4f2fd286b08ab2d3181e46c7c41826 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 543 8.0E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS07875 8411fe76cfe661374b7b7d43d80b31fd 334 PANTHER PTHR11732:SF215 2 334 6.2E-135 T 22-04-2016 TMO_RS07875 8411fe76cfe661374b7b7d43d80b31fd 334 SUPERFAMILY SSF51430 3 315 2.75E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07875 8411fe76cfe661374b7b7d43d80b31fd 334 PANTHER PTHR11732 2 334 6.2E-135 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS07875 8411fe76cfe661374b7b7d43d80b31fd 334 Gene3D G3DSA:3.20.20.100 3 324 4.6E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07875 8411fe76cfe661374b7b7d43d80b31fd 334 Pfam PF00248 Aldo/keto reductase family 17 313 1.3E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 SUPERFAMILY SSF82649 9 153 9.16E-47 T 22-04-2016 TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 Pfam PF01592 NifU-like N terminal domain 15 95 3.6E-20 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 PANTHER PTHR10093 6 96 4.5E-33 T 22-04-2016 TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 PANTHER PTHR10093 116 152 4.5E-33 T 22-04-2016 TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 11 151 2.3E-46 T 22-04-2016 TMO_RS00570 577b77239cf804fb25bc9f8a12d32f09 167 Gene3D G3DSA:3.90.1010.10 14 152 1.1E-38 T 22-04-2016 TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 121 168 2.7E-9 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 211 287 3.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 PANTHER PTHR30465:SF10 110 287 2.5E-55 T 22-04-2016 TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 PANTHER PTHR30465 110 287 2.5E-55 T 22-04-2016 TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 SUPERFAMILY SSF161098 188 282 5.36E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS25110 a1f2eb8f3f0d6fd4a1c36d0d2219c3b9 287 Gene3D G3DSA:1.10.3720.10 186 281 1.5E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 SUPERFAMILY SSF46785 9 92 1.59E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 PANTHER PTHR39168 11 232 1.7E-56 T 22-04-2016 TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 Gene3D G3DSA:1.10.10.10 11 94 2.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 PANTHER PTHR39168:SF1 11 232 1.7E-56 T 22-04-2016 TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 SMART SM00418 13 92 1.2E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS12200 c80e322cf4452454566c8b03397154cd 236 Pfam PF12840 Helix-turn-helix domain 12 72 3.8E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 Gene3D G3DSA:3.40.50.170 4 197 7.4E-72 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 PANTHER PTHR10520 3 197 2.7E-104 T 22-04-2016 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 PANTHER PTHR10520:SF10 3 197 2.7E-104 T 22-04-2016 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 191 31.533 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 Pfam PF00551 Formyl transferase 6 185 4.9E-58 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 SUPERFAMILY SSF53328 6 198 6.02E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 TMO_RS09260 211534fe6ca25ab41007c7bb29f834b6 221 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 1.2E-72 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 TMO_RS05900 3652312c4f4eb036e87db69d7f4bbdc3 106 PANTHER PTHR30388 5 106 5.7E-31 T 22-04-2016 TMO_RS05900 3652312c4f4eb036e87db69d7f4bbdc3 106 PANTHER PTHR30388:SF4 5 106 5.7E-31 T 22-04-2016 TMO_RS05900 3652312c4f4eb036e87db69d7f4bbdc3 106 Pfam PF02625 XdhC and CoxI family 14 79 1.0E-24 T 22-04-2016 IPR003777 XdhC- CoxI TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 PANTHER PTHR24220:SF374 44 411 8.9E-145 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 PANTHER PTHR24220:SF374 9 19 8.9E-145 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 SUPERFAMILY SSF52540 42 274 3.06E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 Gene3D G3DSA:3.10.580.10 276 408 4.2E-16 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 Gene3D G3DSA:3.40.50.300 7 268 3.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 Pfam PF00571 CBS domain 359 407 0.0031 T 22-04-2016 IPR000644 CBS domain TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 SUPERFAMILY SSF54631 293 406 2.56E-12 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 39 407 1.9E-138 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 Pfam PF00005 ABC transporter 48 195 2.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 PANTHER PTHR24220 44 411 8.9E-145 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 PANTHER PTHR24220 9 19 8.9E-145 T 22-04-2016 TMO_RS04395 8e023457fa18fffa9af93627a963bfba 428 SMART SM00382 56 253 5.5E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 Gene3D G3DSA:2.30.40.10 17 82 6.7E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 409 43.898 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 SUPERFAMILY SSF51338 7 71 2.07E-31 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 SUPERFAMILY SSF51338 371 406 2.07E-31 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 405 7.4E-144 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 PANTHER PTHR22642 30 406 1.5E-141 T 22-04-2016 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 Pfam PF01979 Amidohydrolase family 69 391 2.7E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 Gene3D G3DSA:3.20.20.140 83 385 3.7E-44 T 22-04-2016 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 PANTHER PTHR22642:SF1 30 406 1.5E-141 T 22-04-2016 TMO_RS11810 ac482f5af22a45eee9e552af05b520e4 421 SUPERFAMILY SSF51556 71 368 5.39E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 Pfam PF00578 AhpC/TSA family 4 137 7.5E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 Gene3D G3DSA:3.40.30.10 2 177 1.1E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 SUPERFAMILY SSF52833 1 178 1.01E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 PIRSF PIRSF000239 1 179 2.0E-54 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 PANTHER PTHR10681:SF87 1 177 1.2E-85 T 22-04-2016 TMO_RS12585 44e4c86542b3915b1b5ed2b380ee5f3a 179 PANTHER PTHR10681 1 177 1.2E-85 T 22-04-2016 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 SUPERFAMILY SSF52374 3 299 5.09E-109 T 22-04-2016 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PANTHER PTHR11451:SF41 3 319 3.3E-90 T 22-04-2016 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 6.7E-152 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:3.40.50.620 2 67 4.2E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:3.40.50.620 182 231 4.2E-53 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 305 6.5E-94 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.2E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 5.2E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 5.2E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.2E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.2E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 PANTHER PTHR11451 3 319 3.3E-90 T 22-04-2016 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:1.10.10.350 369 465 2.1E-28 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 465 33.063 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:3.90.800.10 68 181 8.3E-34 T 22-04-2016 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 Gene3D G3DSA:1.10.1160.10 234 314 1.2E-28 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS08870 b7ab3f3e2c743a467f7c763e4d0973b4 465 SUPERFAMILY SSF48163 300 465 2.88E-36 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 TMO_RS10850 01e029a18cea9f5d3e4c7a140c8ae916 370 PANTHER PTHR30294:SF22 1 367 4.3E-230 T 22-04-2016 TMO_RS10850 01e029a18cea9f5d3e4c7a140c8ae916 370 Pfam PF12698 ABC-2 family transporter protein 23 361 3.3E-32 T 22-04-2016 TMO_RS10850 01e029a18cea9f5d3e4c7a140c8ae916 370 PANTHER PTHR30294 1 367 4.3E-230 T 22-04-2016 TMO_RS03720 1123a32eb57376de53396ce71b629443 181 Gene3D G3DSA:3.40.630.30 13 175 2.2E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS03720 1123a32eb57376de53396ce71b629443 181 SUPERFAMILY SSF55729 13 164 4.09E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS03720 1123a32eb57376de53396ce71b629443 181 Pfam PF13673 Acetyltransferase (GNAT) domain 47 150 3.8E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS03720 1123a32eb57376de53396ce71b629443 181 PANTHER PTHR23091 11 178 8.2E-20 T 22-04-2016 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 PANTHER PTHR11562:SF55 7 303 1.3E-92 T 22-04-2016 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 Gene3D G3DSA:1.20.1510.10 15 213 4.9E-45 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 Pfam PF01545 Cation efflux family 20 213 2.9E-40 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 SUPERFAMILY SSF160240 217 294 6.54E-22 T 22-04-2016 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 SUPERFAMILY SSF161111 14 214 6.02E-52 T 22-04-2016 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 PANTHER PTHR11562 7 303 1.3E-92 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 293 9.8E-67 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 Gene3D G3DSA:3.30.70.1350 214 294 4.8E-26 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain TMO_RS04965 0ae8b490a626ceaca00921cdbba46890 304 Pfam PF16916 Dimerisation domain of Zinc Transporter 217 293 2.1E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 4 146 25.451 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 PANTHER PTHR21058 6 149 5.1E-46 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 10 141 2.1E-37 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 9 143 1.2E-45 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 SUPERFAMILY SSF52121 4 147 3.14E-51 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09155 0d24ccad6c81180f7b9e3d2c1bfcfbc6 149 Gene3D G3DSA:3.40.50.960 4 145 2.7E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS03960 08cdf7125e558ac8d894bbbea058cb22 195 Pfam PF03923 Uncharacterized lipoprotein 36 191 3.5E-34 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 Gene3D G3DSA:1.10.10.10 9 57 4.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 2.4E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 2.4E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 2.4E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 Gene3D G3DSA:3.30.70.920 63 159 8.5E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 SMART SM00344 10 119 1.4E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 PANTHER PTHR30154:SF28 2 161 3.7E-52 T 22-04-2016 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 Pfam PF01037 Lrp/AsnC ligand binding domain 76 150 4.9E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 SUPERFAMILY SSF46785 10 69 2.13E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 PANTHER PTHR30154 2 161 3.7E-52 T 22-04-2016 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 56 9.6E-16 T 22-04-2016 TMO_RS12315 5713fd7f746855fbbc916ab7b0ba792a 170 SUPERFAMILY SSF54909 72 158 7.51E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS15875 5f97270343b60c6f7624ad8803d2ab43 179 PANTHER PTHR34848 1 170 2.9E-64 T 22-04-2016 TMO_RS15875 5f97270343b60c6f7624ad8803d2ab43 179 Gene3D G3DSA:3.40.50.300 2 168 7.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15875 5f97270343b60c6f7624ad8803d2ab43 179 PIRSF PIRSF006135 1 170 3.8E-50 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 TMO_RS15875 5f97270343b60c6f7624ad8803d2ab43 179 SUPERFAMILY SSF52540 2 168 3.54E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15875 5f97270343b60c6f7624ad8803d2ab43 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 166 5.6E-57 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 TMO_RS15500 b4c7e91e4816b487e57e9b8fb6c15631 215 Pfam PF01810 LysE type translocator 15 207 1.2E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS15500 b4c7e91e4816b487e57e9b8fb6c15631 215 PANTHER PTHR30086 1 214 4.6E-17 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 PANTHER PTHR30429 1 266 3.5E-117 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 Gene3D G3DSA:3.40.190.10 28 157 9.3E-51 T 22-04-2016 TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 PIRSF PIRSF002854 1 266 2.6E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 Pfam PF03180 NLPA lipoprotein 30 266 9.5E-89 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 13 266 3.7E-77 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17585 3fbb90986bc04e096eeb67d6c950eb3b 266 SUPERFAMILY SSF53850 29 266 2.97E-81 T 22-04-2016 TMO_RS02595 e3feba44ec9f533595fa638e41484d00 205 Gene3D G3DSA:3.40.50.1240 52 180 3.5E-11 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS02595 e3feba44ec9f533595fa638e41484d00 205 SUPERFAMILY SSF53254 56 195 2.55E-12 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 49 1.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 PANTHER PTHR30118 1 289 4.1E-70 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 SUPERFAMILY SSF53850 73 280 2.17E-33 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 PANTHER PTHR30118:SF8 1 289 4.1E-70 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 3.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 27 3.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 6 17 3.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Gene3D G3DSA:3.40.190.10 73 156 4.6E-24 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Gene3D G3DSA:3.40.190.10 255 282 4.6E-24 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Gene3D G3DSA:1.10.10.10 1 68 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Gene3D G3DSA:3.40.190.10 157 251 1.2E-22 T 22-04-2016 TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 Pfam PF03466 LysR substrate binding domain 79 280 2.5E-21 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS07515 e5e48a9a81b789ef8f517091a3de16ad 291 SUPERFAMILY SSF46785 3 68 2.04E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 SUPERFAMILY SSF53800 11 339 1.8E-93 T 22-04-2016 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 TIGRFAM TIGR00109 hemH: ferrochelatase 10 334 1.8E-78 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 ProSitePatterns PS00534 Ferrochelatase signature. 200 218 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 Hamap MF_00323 Ferrochelatase [hemH]. 11 336 32.951 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 Gene3D G3DSA:3.40.50.1400 211 335 2.9E-36 T 22-04-2016 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 PANTHER PTHR11108 1 335 6.7E-106 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 Gene3D G3DSA:3.40.50.1400 12 210 8.2E-57 T 22-04-2016 TMO_RS17155 8d6bc40cc85938561223cebf8ca5b4cb 363 Pfam PF00762 Ferrochelatase 13 335 1.1E-100 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:2.30.38.10 349 425 4.0E-21 T 22-04-2016 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 516 5.4E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:3.40.50.980 191 348 1.5E-32 T 22-04-2016 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:3.40.50.980 19 190 2.0E-31 T 22-04-2016 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 SUPERFAMILY SSF56801 16 529 3.14E-137 T 22-04-2016 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Pfam PF00501 AMP-binding enzyme 25 432 4.1E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 184 195 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 PANTHER PTHR24096 1 524 3.9E-133 T 22-04-2016 TMO_RS02810 7c7d5e2012d55a82db8b475315cfc36b 536 Gene3D G3DSA:3.30.300.30 429 529 1.8E-29 T 22-04-2016 TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PIRSF PIRSF000126 1 263 1.8E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PANTHER PTHR24322:SF330 154 185 2.0E-32 T 22-04-2016 TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PANTHER PTHR24322:SF330 10 138 2.0E-32 T 22-04-2016 TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 Gene3D G3DSA:3.40.50.720 7 224 7.5E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.8E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.8E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.8E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 SUPERFAMILY SSF51735 6 232 2.72E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 Pfam PF00106 short chain dehydrogenase 7 194 1.5E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PANTHER PTHR24322 154 185 2.0E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01150 419a7a429a44afc62b8c8562da6d9bb3 267 PANTHER PTHR24322 10 138 2.0E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 SUPERFAMILY SSF103481 61 163 4.45E-16 T 22-04-2016 TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 Pfam PF00892 EamA-like transporter family 33 160 1.8E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 Pfam PF00892 EamA-like transporter family 192 328 1.3E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 SUPERFAMILY SSF103481 230 331 1.57E-10 T 22-04-2016 TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 PANTHER PTHR12715 26 161 3.5E-47 T 22-04-2016 TMO_RS07270 0767e10711246f21b00d9ce80737fb72 358 PANTHER PTHR12715 177 338 3.5E-47 T 22-04-2016 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 Pfam PF01497 Periplasmic binding protein 44 271 2.1E-24 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 PANTHER PTHR30535 16 293 2.8E-60 T 22-04-2016 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 Gene3D G3DSA:3.40.50.1980 166 293 3.3E-18 T 22-04-2016 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 Gene3D G3DSA:3.40.50.1980 42 155 9.9E-19 T 22-04-2016 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 SUPERFAMILY SSF53807 42 291 1.3E-41 T 22-04-2016 TMO_RS06705 1ae3288c53b9ed1072617259b6eba058 298 PANTHER PTHR30535:SF4 16 293 2.8E-60 T 22-04-2016 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 Pfam PF05191 Adenylate kinase, active site lid 127 163 5.0E-12 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 Gene3D G3DSA:3.40.50.300 2 212 1.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 Hamap MF_00235 Adenylate kinase [adk]. 1 214 49.752 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 Pfam PF00406 Adenylate kinase 5 191 5.0E-59 T 22-04-2016 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PANTHER PTHR23359 1 214 1.7E-94 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 SUPERFAMILY SSF52540 2 213 6.58E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 161 176 4.2E-37 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 178 192 4.2E-37 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 81 97 4.2E-37 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 32 46 4.2E-37 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 PRINTS PR00094 Adenylate kinase signature 4 17 4.2E-37 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS13150 33cddb3a8d1244d8b1719c37adb950f5 217 TIGRFAM TIGR01351 adk: adenylate kinase 3 213 3.9E-78 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 307 460 6.0E-38 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 Pfam PF07731 Multicopper oxidase 361 459 3.6E-21 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 157 271 1.67E-8 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 34 157 1.02E-29 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 PANTHER PTHR11709 51 460 2.3E-54 T 22-04-2016 TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 155 274 8.1E-15 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 Pfam PF07732 Multicopper oxidase 49 155 6.3E-32 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 Gene3D G3DSA:2.60.40.420 46 154 2.6E-27 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 SUPERFAMILY SSF49503 308 459 2.57E-31 T 22-04-2016 IPR008972 Cupredoxin TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 ProSitePatterns PS00079 Multicopper oxidases signature 1. 437 457 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 PANTHER PTHR11709:SF33 51 460 2.3E-54 T 22-04-2016 TMO_RS01995 7a1d2d564d5d40eddf10a8b836fe3eee 461 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_RS16885 0a5bc804f8422ee7b886bce3bd82e291 237 SUPERFAMILY SSF52499 5 207 1.92E-44 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS16885 0a5bc804f8422ee7b886bce3bd82e291 237 Gene3D G3DSA:3.40.50.850 8 209 6.7E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS16885 0a5bc804f8422ee7b886bce3bd82e291 237 PANTHER PTHR14119 1 205 2.1E-111 T 22-04-2016 TMO_RS16885 0a5bc804f8422ee7b886bce3bd82e291 237 PANTHER PTHR14119:SF1 1 205 2.1E-111 T 22-04-2016 TMO_RS16885 0a5bc804f8422ee7b886bce3bd82e291 237 Pfam PF00857 Isochorismatase family 15 168 5.4E-26 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 SUPERFAMILY SSF56300 1 259 3.34E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 PANTHER PTHR12905:SF7 37 215 1.7E-28 T 22-04-2016 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 PANTHER PTHR12905:SF7 1 20 1.7E-28 T 22-04-2016 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 Gene3D G3DSA:3.60.21.10 3 220 4.8E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 Pfam PF00149 Calcineurin-like phosphoesterase 2 197 2.2E-16 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 PANTHER PTHR12905 37 215 1.7E-28 T 22-04-2016 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 PANTHER PTHR12905 1 20 1.7E-28 T 22-04-2016 TMO_RS04000 c1694969390f86068a84dc93e97e3486 265 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 255 39.522 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 SUPERFAMILY SSF53748 5 397 2.94E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 Gene3D G3DSA:3.40.50.1270 181 385 8.5E-75 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 1.6E-75 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PIRSF PIRSF000724 1 398 2.3E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 Gene3D G3DSA:3.40.50.1260 6 180 1.2E-65 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 PANTHER PTHR11406 4 398 3.0E-181 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 Pfam PF00162 Phosphoglycerate kinase 9 388 5.0E-141 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 398 38.054 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS04460 05e763101dc39550e971f7cea7cf855b 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 17 27 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 PANTHER PTHR10986 2 117 1.2E-57 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 Gene3D G3DSA:1.10.1900.20 55 117 2.6E-30 T 22-04-2016 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.809 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-34 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-34 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-34 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 Pfam PF00453 Ribosomal protein L20 3 109 2.0E-46 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.4E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 71 1.0E-13 T 22-04-2016 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 TMO_RS01015 6d87eb71aa42a6e419c558693ee7523c 122 SUPERFAMILY SSF74731 3 117 9.81E-47 T 22-04-2016 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 Pfam PF02321 Outer membrane efflux protein 286 463 1.0E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 Pfam PF02321 Outer membrane efflux protein 74 246 2.0E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 Gene3D G3DSA:1.20.1600.10 65 465 1.7E-90 T 22-04-2016 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 464 3.7E-82 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 SUPERFAMILY SSF56954 2 31 2.62E-90 T 22-04-2016 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 SUPERFAMILY SSF56954 65 464 2.62E-90 T 22-04-2016 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 PANTHER PTHR30203 4 464 2.7E-114 T 22-04-2016 TMO_RS11875 5d5722ec4bef1fb7799574bd2ac5b80c 471 PANTHER PTHR30203:SF13 4 464 2.7E-114 T 22-04-2016 TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 Gene3D G3DSA:3.40.50.300 214 333 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 Gene3D G3DSA:3.40.50.300 86 139 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 SMART SM00763 26 383 1.8E-168 T 22-04-2016 IPR013153 PrkA AAA domain TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 SUPERFAMILY SSF52540 244 371 1.92E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 SUPERFAMILY SSF52540 82 157 1.92E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 PANTHER PTHR30267:SF2 5 643 3.1E-158 T 22-04-2016 TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 PANTHER PTHR30267 5 643 3.1E-158 T 22-04-2016 TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 Pfam PF08298 PrkA AAA domain 27 381 4.8E-152 T 22-04-2016 IPR013153 PrkA AAA domain TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 Pfam PF06798 PrkA serine protein kinase C-terminal domain 385 635 7.0E-77 T 22-04-2016 IPR010650 PrkA C-terminal domain TMO_RS09720 04a93fce018c8b7378fba0a62fde9e44 643 PIRSF PIRSF000549 5 643 9.2E-232 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 SMART SM00729 252 470 3.7E-27 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 SUPERFAMILY SSF102114 241 469 2.49E-39 T 22-04-2016 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 PANTHER PTHR11918 110 198 2.5E-38 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 PANTHER PTHR11918 216 589 2.5E-38 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 Pfam PF04055 Radical SAM superfamily 257 425 1.0E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 Gene3D G3DSA:3.80.30.20 257 458 2.3E-35 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 PANTHER PTHR11918:SF64 110 198 2.5E-38 T 22-04-2016 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 PANTHER PTHR11918:SF64 216 589 2.5E-38 T 22-04-2016 TMO_RS05335 829048b1bdb6174154670309492fbdc8 707 Pfam PF02310 B12 binding domain 107 179 1.9E-7 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PANTHER PTHR24322 15 142 2.8E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PANTHER PTHR24322 158 190 2.8E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PANTHER PTHR24322:SF427 15 142 2.8E-55 T 22-04-2016 TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PANTHER PTHR24322:SF427 158 190 2.8E-55 T 22-04-2016 TMO_RS04020 351d4c806053fc70a3327668699ef933 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 252 9.9E-60 T 22-04-2016 TMO_RS04020 351d4c806053fc70a3327668699ef933 268 Gene3D G3DSA:3.40.50.720 6 254 3.0E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04020 351d4c806053fc70a3327668699ef933 268 SUPERFAMILY SSF51735 10 254 1.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04020 351d4c806053fc70a3327668699ef933 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.0E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00430 72677d82743a2aaf8f87b162af7ffcbe 499 SUPERFAMILY SSF57997 179 289 2.94E-6 T 22-04-2016 TMO_RS00430 72677d82743a2aaf8f87b162af7ffcbe 499 Pfam PF09731 Mitochondrial inner membrane protein 261 463 2.2E-8 T 22-04-2016 IPR019133 Mitochondrial inner membrane protein Mitofilin TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 133 236 5.5E-10 T 22-04-2016 TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 92 2.3E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 SUPERFAMILY SSF54593 129 242 2.26E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 Gene3D G3DSA:3.10.180.10 2 96 1.6E-10 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 SUPERFAMILY SSF54593 1 160 4.26E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS09230 3fb65d403d9ad0452981a451987623ef 255 Gene3D G3DSA:3.10.180.10 134 242 1.5E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 SUPERFAMILY SSF53850 91 296 6.36E-33 T 22-04-2016 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 PANTHER PTHR30346:SF13 1 290 7.0E-73 T 22-04-2016 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 Pfam PF03466 LysR substrate binding domain 91 295 7.9E-37 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:1.10.10.10 3 84 7.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:3.40.190.10 180 268 3.5E-28 T 22-04-2016 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 PANTHER PTHR30346 1 290 7.0E-73 T 22-04-2016 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 Gene3D G3DSA:3.40.190.10 92 179 4.9E-15 T 22-04-2016 TMO_RS12715 b138f0cb1f55c20b442f92f0e24809bc 301 SUPERFAMILY SSF46785 2 113 1.42E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51556 59 373 1.97E-64 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 PANTHER PTHR11271:SF7 7 448 5.5E-85 T 22-04-2016 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51338 7 73 1.61E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 Pfam PF01979 Amidohydrolase family 56 420 7.7E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 Gene3D G3DSA:3.20.20.140 62 381 2.0E-58 T 22-04-2016 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 Gene3D G3DSA:2.30.40.10 382 424 7.0E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 Gene3D G3DSA:2.30.40.10 4 61 7.0E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 SUPERFAMILY SSF51338 330 450 1.3E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11435 ad31e74915d2b7c0a805369a834d35db 470 PANTHER PTHR11271 7 448 5.5E-85 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF52374 422 667 1.49E-149 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF52374 3 225 1.49E-149 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.40.50.620 2 221 5.2E-153 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.40.50.620 431 580 5.2E-153 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.40.50.620 617 646 5.2E-153 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 617 657 4.1E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 424 579 5.0E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 170 6.5E-23 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946:SF7 617 860 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946:SF7 242 581 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946:SF7 3 205 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946 617 860 0.0 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946 242 581 0.0 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PANTHER PTHR11946 3 205 0.0 T 22-04-2016 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 409 3.4E-62 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:1.10.730.10 647 796 2.9E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Pfam PF08264 Anticodon-binding domain of tRNA 703 826 1.1E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 861 22.806 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF47323 664 860 2.8E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 SUPERFAMILY SSF50677 225 418 3.77E-44 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 860 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 531 553 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 564 574 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 Gene3D G3DSA:3.90.740.10 222 430 5.0E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 TMO_RS17235 ec4324d0ae1b5016895c74ba7c2110ff 861 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 Gene3D G3DSA:1.20.1090.10 205 393 3.5E-62 T 22-04-2016 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 PIRSF PIRSF001455 35 398 1.0E-95 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 SUPERFAMILY SSF56796 38 394 1.44E-106 T 22-04-2016 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 Pfam PF01761 3-dehydroquinate synthase 99 362 1.4E-96 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 44 389 2.1E-106 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 PANTHER PTHR21090 25 399 1.3E-151 T 22-04-2016 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 33 395 39.772 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 TMO_RS01760 77f87a672a5bb9be63a3ef90211f9d63 409 Gene3D G3DSA:3.40.50.1970 34 204 1.5E-60 T 22-04-2016 TMO_RS29555 f9d270958f0e4dcdceccfdb36d1b2622 213 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 50 188 1.0E-22 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 SMART SM00304 213 266 5.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089:SF40 134 147 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089:SF40 281 559 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089:SF40 187 248 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089 134 147 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089 281 559 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PANTHER PTHR32089 187 248 1.1E-118 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 SUPERFAMILY SSF58104 241 268 1.05E-59 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 SUPERFAMILY SSF58104 308 555 1.05E-59 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF00672 HAMP domain 194 261 2.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 180 2.9E-28 T 22-04-2016 IPR024478 4HB MCP domain TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 Gene3D G3DSA:1.10.287.950 318 524 2.0E-45 T 22-04-2016 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 554 7.1E-35 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 352 7.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 7.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 7.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 7.2E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14670 b4989dab2e5b26465a55b592eb539f6f 562 SMART SM00283 302 556 4.9E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 SUPERFAMILY SSF103473 18 207 5.75E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 SUPERFAMILY SSF103473 267 439 5.75E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 SUPERFAMILY SSF103473 496 522 5.75E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Pfam PF07690 Major Facilitator Superfamily 35 428 7.8E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 PANTHER PTHR23501:SF51 31 524 2.4E-187 T 22-04-2016 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Gene3D G3DSA:1.20.1250.20 31 204 1.5E-24 T 22-04-2016 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Gene3D G3DSA:1.20.1250.20 282 436 5.1E-20 T 22-04-2016 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 Gene3D G3DSA:1.20.1250.20 494 522 5.1E-20 T 22-04-2016 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 31 514 2.5E-137 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 TMO_RS14610 7feef5ddf98cf05c0d7433adcbc1f2c6 533 PANTHER PTHR23501 31 524 2.4E-187 T 22-04-2016 TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 Gene3D G3DSA:3.40.250.10 4 153 9.9E-47 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 SMART SM00450 10 134 1.5E-23 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 SMART SM00450 158 280 4.3E-20 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 Pfam PF00581 Rhodanese-like domain 162 276 7.9E-12 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 Pfam PF00581 Rhodanese-like domain 12 130 5.9E-16 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 SUPERFAMILY SSF52821 162 283 1.31E-35 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 Gene3D G3DSA:3.40.250.10 158 284 1.7E-40 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 PANTHER PTHR11364 1 284 4.9E-115 T 22-04-2016 TMO_RS12625 2281239c6d002a3407e88652a482bacd 284 SUPERFAMILY SSF52821 2 151 4.32E-43 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS16975 dfa9021c74d5836c55d45c13000e116a 184 TIGRFAM TIGR04061 AZL_007950_fam: AZL_007950 family protein 48 183 1.7E-38 T 22-04-2016 IPR023973 Conserved hypothetical protein CHP04061, AZL007950 TMO_RS16975 dfa9021c74d5836c55d45c13000e116a 184 TIGRFAM TIGR04160 methbact_MbnC: methanobactin biosynthesis cassette protein MbnC 94 181 1.7E-25 T 22-04-2016 TMO_RS29060 a7df5f5c44ee59ca13756abf2b830bef 114 Pfam PF13103 TonB C terminal 19 89 2.9E-6 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 TMO_RS29060 a7df5f5c44ee59ca13756abf2b830bef 114 Gene3D G3DSA:3.30.1150.10 4 112 1.4E-20 T 22-04-2016 TMO_RS29060 a7df5f5c44ee59ca13756abf2b830bef 114 SUPERFAMILY SSF74653 10 110 6.93E-14 T 22-04-2016 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 Gene3D G3DSA:3.90.1170.20 9 99 1.1E-7 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 SUPERFAMILY SSF54675 7 103 5.45E-9 T 22-04-2016 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 Gene3D G3DSA:3.20.20.70 104 249 1.9E-33 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 Gene3D G3DSA:3.20.20.70 286 340 1.9E-33 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 SUPERFAMILY SSF51690 286 365 3.93E-31 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 SUPERFAMILY SSF51690 106 249 3.93E-31 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 TMO_RS11570 072505b46efe96c211fafdf1bc434730 376 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 49 101 1.3E-4 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 TMO_RS08600 a68f8addf54f8a9cf355302f2ed42d21 154 Gene3D G3DSA:3.20.80.10 17 150 6.3E-19 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain TMO_RS08600 a68f8addf54f8a9cf355302f2ed42d21 154 SUPERFAMILY SSF55136 21 144 6.28E-6 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 163 1.7E-52 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 SUPERFAMILY SSF56420 2 168 1.7E-62 T 22-04-2016 IPR023635 Peptide deformylase TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 125 154 1.4E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 106 124 1.4E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 33 62 1.4E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PRINTS PR01576 Peptide deformylase signature 94 105 1.4E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 Pfam PF01327 Polypeptide deformylase 4 157 2.3E-50 T 22-04-2016 IPR023635 Peptide deformylase TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 Hamap MF_00163 Peptide deformylase [def]. 2 167 31.316 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PIRSF PIRSF004749 1 182 7.8E-59 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PANTHER PTHR10458:SF10 1 170 5.5E-75 T 22-04-2016 TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 Gene3D G3DSA:3.90.45.10 5 171 1.3E-62 T 22-04-2016 IPR023635 Peptide deformylase TMO_RS13600 6c8410863d02879d1b6c97898506423f 184 PANTHER PTHR10458 1 170 5.5E-75 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 Gene3D G3DSA:3.60.15.10 16 242 1.4E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 PANTHER PTHR23131:SF4 18 297 1.4E-68 T 22-04-2016 TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 SMART SM00849 39 213 2.7E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 SUPERFAMILY SSF56281 18 286 1.34E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 Pfam PF00753 Metallo-beta-lactamase superfamily 43 213 2.1E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS15670 7779de6322e89f4404d919f7c21a40db 300 PANTHER PTHR23131 18 297 1.4E-68 T 22-04-2016 TMO_RS01560 2fca56f44dafbf6b48bf604a7f5037fe 236 PANTHER PTHR17630 12 236 4.3E-36 T 22-04-2016 TMO_RS01560 2fca56f44dafbf6b48bf604a7f5037fe 236 Gene3D G3DSA:3.40.50.1820 5 231 3.5E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01560 2fca56f44dafbf6b48bf604a7f5037fe 236 Pfam PF01738 Dienelactone hydrolase family 15 226 2.4E-40 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 TMO_RS01560 2fca56f44dafbf6b48bf604a7f5037fe 236 SUPERFAMILY SSF53474 2 228 2.08E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01560 2fca56f44dafbf6b48bf604a7f5037fe 236 PANTHER PTHR17630:SF42 12 236 4.3E-36 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF00364 Biotin-requiring enzyme 4 77 8.2E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 241 465 6.5E-85 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 PANTHER PTHR23151:SF9 3 197 1.3E-206 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 PANTHER PTHR23151:SF9 239 465 1.3E-206 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF51230 1 96 2.49E-29 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:2.40.50.100 1 94 1.1E-34 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF47005 134 178 3.66E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 465 5.9E-164 T 22-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 SUPERFAMILY SSF52777 239 465 2.8E-83 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Pfam PF02817 e3 binding domain 139 174 3.4E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:3.30.559.10 240 465 1.6E-89 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 Gene3D G3DSA:4.10.320.10 130 180 1.5E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 PANTHER PTHR23151 3 197 1.3E-206 T 22-04-2016 TMO_RS08620 7965e02f68ba813ca02dbd5bf1edcc3b 465 PANTHER PTHR23151 239 465 1.3E-206 T 22-04-2016 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 PANTHER PTHR32322 6 295 7.0E-60 T 22-04-2016 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 Pfam PF00892 EamA-like transporter family 25 150 8.4E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 Pfam PF00892 EamA-like transporter family 166 294 1.7E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 PANTHER PTHR32322:SF11 6 295 7.0E-60 T 22-04-2016 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 SUPERFAMILY SSF103481 50 152 3.01E-12 T 22-04-2016 TMO_RS05605 3f05e08ad4872ea2dc5ec9e05e557aff 298 SUPERFAMILY SSF103481 200 295 6.41E-10 T 22-04-2016 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PANTHER PTHR11739 3 365 1.9E-141 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 Gene3D G3DSA:1.10.580.10 14 230 9.9E-75 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PIRSF PIRSF001369 2 367 5.7E-122 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 Gene3D G3DSA:1.10.230.10 231 318 2.7E-26 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 SUPERFAMILY SSF48256 3 365 8.37E-120 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 ProSitePatterns PS00480 Citrate synthase signature. 252 264 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 170 185 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 306 322 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 326 340 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 192 220 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 245 265 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 PRINTS PR00143 Citrate synthase signature 121 134 3.1E-35 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS00050 4fe4a2aeb0e251e0fd8f03cbd8eb0228 367 Pfam PF00285 Citrate synthase, C-terminal domain 8 355 1.7E-115 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 PANTHER PTHR11360 14 420 2.1E-153 T 22-04-2016 TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 PANTHER PTHR11360:SF137 14 420 2.1E-153 T 22-04-2016 TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 SUPERFAMILY SSF103473 15 422 8.37E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 Pfam PF07690 Major Facilitator Superfamily 26 348 1.2E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 Gene3D G3DSA:1.20.1250.20 237 419 2.8E-19 T 22-04-2016 TMO_RS03110 fb400dbd72066ceb60968670861709dd 423 Gene3D G3DSA:1.20.1250.20 18 203 1.0E-22 T 22-04-2016 TMO_RS28925 411e7d7d83ab5b36873526a43e942c56 226 Pfam PF10637 Oxoglutarate and iron-dependent oxygenase degradation C-term 2 184 7.9E-12 T 22-04-2016 IPR019601 Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain GO:0005506|GO:0016706|GO:0031418|GO:0055114 KEGG: 00260+1.14.11.-|KEGG: 00361+1.14.11.-|KEGG: 00904+1.14.11.- TMO_RS06085 408c81b81fe9f8885da70c3963b3171c 255 PANTHER PTHR34979 13 245 7.2E-30 T 22-04-2016 TMO_RS06085 408c81b81fe9f8885da70c3963b3171c 255 Pfam PF03591 AzlC protein 23 165 2.0E-33 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease TMO_RS02180 c6646cb3be01f04b6ce945e643b185ab 411 PANTHER PTHR12778 13 396 1.8E-47 T 22-04-2016 TMO_RS02180 c6646cb3be01f04b6ce945e643b185ab 411 SUPERFAMILY SSF103473 3 399 4.84E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS02180 c6646cb3be01f04b6ce945e643b185ab 411 Pfam PF07690 Major Facilitator Superfamily 39 320 3.8E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS02180 c6646cb3be01f04b6ce945e643b185ab 411 Gene3D G3DSA:1.20.1250.20 215 397 5.2E-7 T 22-04-2016 TMO_RS02180 c6646cb3be01f04b6ce945e643b185ab 411 Gene3D G3DSA:1.20.1250.20 13 191 2.3E-7 T 22-04-2016 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 Pfam PF08281 Sigma-70, region 4 113 160 2.2E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 165 3.2E-21 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 SUPERFAMILY SSF88946 6 84 1.57E-12 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 PANTHER PTHR30173 10 171 1.2E-25 T 22-04-2016 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 Gene3D G3DSA:1.10.1740.10 9 80 1.1E-11 T 22-04-2016 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 Gene3D G3DSA:1.10.10.10 105 170 2.6E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 SUPERFAMILY SSF88659 88 170 6.73E-14 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS11425 a2cf9e4a04cde0d056a7ca055d492e9b 174 Pfam PF04542 Sigma-70 region 2 10 79 2.4E-9 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 SUPERFAMILY SSF46785 8 78 1.92E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 Pfam PF00455 DeoR C terminal sensor domain 79 237 6.0E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 10 44 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 Gene3D G3DSA:1.10.10.10 6 60 8.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 Gene3D G3DSA:3.40.50.1360 81 220 1.0E-11 T 22-04-2016 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 42 60 8.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 42 8.1E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 Pfam PF08220 DeoR-like helix-turn-helix domain 10 61 4.7E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 PANTHER PTHR30363 6 257 8.5E-73 T 22-04-2016 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 SUPERFAMILY SSF100950 79 238 6.88E-27 T 22-04-2016 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 PANTHER PTHR30363:SF1 6 257 8.5E-73 T 22-04-2016 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 SMART SM01134 77 238 1.9E-53 T 22-04-2016 TMO_RS01990 82e97380feadaf3a061c6e779f7e920e 259 SMART SM00420 10 62 7.1E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 TMO_RS16780 6388615972a7d475e0669f2204f524b6 483 PANTHER PTHR32024:SF3 1 482 2.2E-177 T 22-04-2016 TMO_RS16780 6388615972a7d475e0669f2204f524b6 483 PANTHER PTHR32024 1 482 2.2E-177 T 22-04-2016 TMO_RS16780 6388615972a7d475e0669f2204f524b6 483 PIRSF PIRSF006247 1 483 1.4E-165 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 TMO_RS16780 6388615972a7d475e0669f2204f524b6 483 Pfam PF02386 Cation transport protein 46 477 5.6E-56 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417 193 434 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417 147 157 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417 12 128 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417:SF2 193 434 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417:SF2 147 157 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 PANTHER PTHR23417:SF2 12 128 1.5E-91 T 22-04-2016 TMO_RS14280 5b23437e518647a29d22e1f70fb51df3 444 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 45 223 7.5E-51 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 TMO_RS14765 9eb781da241a98c035214b64eccf67a2 514 Pfam PF00263 Bacterial type II and III secretion system protein 300 448 1.7E-13 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 TMO_RS04870 68f6589ae6d65550003c182c2f0059d2 373 Gene3D G3DSA:3.40.50.1820 70 371 4.4E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04870 68f6589ae6d65550003c182c2f0059d2 373 Pfam PF11339 Protein of unknown function (DUF3141) 83 338 7.2E-22 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 TMO_RS04870 68f6589ae6d65550003c182c2f0059d2 373 PANTHER PTHR36837 83 373 2.2E-39 T 22-04-2016 TMO_RS04870 68f6589ae6d65550003c182c2f0059d2 373 SUPERFAMILY SSF53474 70 371 4.41E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 PANTHER PTHR20858:SF17 3 265 4.1E-92 T 22-04-2016 TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 265 1.1E-78 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 Pfam PF08543 Phosphomethylpyrimidine kinase 14 263 1.2E-79 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 Gene3D G3DSA:3.40.1190.20 5 265 1.7E-88 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 SUPERFAMILY SSF53613 4 267 2.81E-70 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS04605 f502b21d0640c96c25a9e9e00f1ba003 274 PANTHER PTHR20858 3 265 4.1E-92 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362 193 294 7.9E-182 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362 5 172 7.9E-182 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362 351 522 7.9E-182 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 291 3.8E-50 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 306 514 4.2E-36 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362:SF7 193 294 7.9E-182 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362:SF7 5 172 7.9E-182 T 22-04-2016 TMO_RS08070 f15a0ff811b62c3f1e5ceb0940296827 525 PANTHER PTHR33362:SF7 351 522 7.9E-182 T 22-04-2016 TMO_RS03245 517b613d80fb44315107f3a97a92af56 153 Pfam PF01575 MaoC like domain 12 116 7.9E-22 T 22-04-2016 IPR002539 MaoC-like domain TMO_RS03245 517b613d80fb44315107f3a97a92af56 153 SUPERFAMILY SSF54637 8 147 1.57E-34 T 22-04-2016 IPR029069 HotDog domain TMO_RS03245 517b613d80fb44315107f3a97a92af56 153 PANTHER PTHR13078 13 150 5.8E-35 T 22-04-2016 TMO_RS03245 517b613d80fb44315107f3a97a92af56 153 Gene3D G3DSA:3.10.129.10 10 150 1.1E-32 T 22-04-2016 IPR029069 HotDog domain TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 SUPERFAMILY SSF103473 7 290 9.42E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 SUPERFAMILY SSF103473 316 405 9.42E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 PANTHER PTHR23521:SF2 316 442 6.9E-86 T 22-04-2016 TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 PANTHER PTHR23521:SF2 2 293 6.9E-86 T 22-04-2016 TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 PANTHER PTHR23521 316 442 6.9E-86 T 22-04-2016 TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 PANTHER PTHR23521 2 293 6.9E-86 T 22-04-2016 TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 Gene3D G3DSA:1.20.1250.20 204 401 9.5E-16 T 22-04-2016 TMO_RS15425 b831f686f4e6501a9f9a99b0cd3e6065 514 Gene3D G3DSA:1.20.1250.20 8 176 2.6E-6 T 22-04-2016 TMO_RS03670 c244f1eb081a67ffc6bb61edf049e2c0 250 Gene3D G3DSA:3.40.50.150 74 147 1.9E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS03670 c244f1eb081a67ffc6bb61edf049e2c0 250 SUPERFAMILY SSF53335 51 165 1.48E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 264 1.3E-54 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 PANTHER PTHR11941 10 263 2.7E-105 T 22-04-2016 TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 Gene3D G3DSA:3.90.226.10 11 206 4.2E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 Gene3D G3DSA:1.10.12.10 209 265 1.6E-12 T 22-04-2016 IPR014748 Crontonase, C-terminal TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 PANTHER PTHR11941:SF86 10 263 2.7E-105 T 22-04-2016 TMO_RS12965 f5e52c1470d3be6bb37bc73e45b969c7 265 SUPERFAMILY SSF52096 10 265 7.62E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 Gene3D G3DSA:1.10.530.10 63 118 1.8E-53 T 22-04-2016 TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 Gene3D G3DSA:1.10.530.10 199 315 1.8E-53 T 22-04-2016 TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 Pfam PF13406 Transglycosylase SLT domain 18 311 5.0E-109 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 PANTHER PTHR30163:SF2 16 316 4.3E-124 T 22-04-2016 TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 17 315 9.5E-113 T 22-04-2016 IPR011970 Lytic murein transglycosylase TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 SUPERFAMILY SSF53955 4 315 6.75E-99 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS08420 fde9db9f305f9f620f20d7acff9142da 316 PANTHER PTHR30163 16 316 4.3E-124 T 22-04-2016 IPR011757 Lytic transglycosylase MltB TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 168 1.4E-63 T 22-04-2016 TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 Gene3D G3DSA:3.40.30.10 88 172 1.1E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 PANTHER PTHR10371 2 200 1.8E-109 T 22-04-2016 TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 PIRSF PIRSF000216 1 207 4.5E-76 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 167 8.6E-59 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 SUPERFAMILY SSF52833 13 181 1.57E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS09925 546346f3a8f2d67d959a59659fcdc31c 208 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 125 143 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 TMO_RS08215 d7d3881e3b7e70150fc8209f6ae6ab9b 281 PANTHER PTHR11863:SF2 96 234 1.1E-18 T 22-04-2016 TMO_RS08215 d7d3881e3b7e70150fc8209f6ae6ab9b 281 Pfam PF04116 Fatty acid hydroxylase superfamily 100 234 1.7E-24 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 TMO_RS08215 d7d3881e3b7e70150fc8209f6ae6ab9b 281 PANTHER PTHR11863 96 234 1.1E-18 T 22-04-2016 TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 PANTHER PTHR24220:SF361 8 256 3.2E-108 T 22-04-2016 TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 SUPERFAMILY SSF52540 8 228 4.41E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 Pfam PF00005 ABC transporter 26 168 1.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 Gene3D G3DSA:3.40.50.300 3 223 3.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 PANTHER PTHR24220 8 256 3.2E-108 T 22-04-2016 TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 SMART SM00382 35 218 5.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 256 4.4E-101 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TMO_RS10805 59d1bf3207d015f167b49bb90af6c665 275 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 SUPERFAMILY SSF53383 2 382 5.21E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 PANTHER PTHR11986 4 385 5.5E-154 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 382 42.21 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 207 244 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 Gene3D G3DSA:3.40.640.10 43 274 7.4E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 Gene3D G3DSA:3.90.1150.10 275 384 2.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 1 381 2.1E-131 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 Pfam PF00202 Aminotransferase class-III 7 380 4.3E-101 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS16730 dce3aaf2d3e174de8a971c936702fa98 385 PANTHER PTHR11986:SF79 4 385 5.5E-154 T 22-04-2016 TMO_RS02105 2a546fce95c53c53b9e972b50563bfdf 185 SUPERFAMILY SSF81342 16 183 4.32E-31 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 TMO_RS02105 2a546fce95c53c53b9e972b50563bfdf 185 Gene3D G3DSA:1.20.950.20 48 181 1.5E-9 T 22-04-2016 TMO_RS02105 2a546fce95c53c53b9e972b50563bfdf 185 PANTHER PTHR30485 48 185 8.9E-13 T 22-04-2016 TMO_RS02105 2a546fce95c53c53b9e972b50563bfdf 185 Pfam PF01292 Prokaryotic cytochrome b561 18 179 8.0E-19 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 TMO_RS02105 2a546fce95c53c53b9e972b50563bfdf 185 PANTHER PTHR30485:SF0 48 185 8.9E-13 T 22-04-2016 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 PANTHER PTHR11019:SF61 153 254 3.9E-38 T 22-04-2016 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 250 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 SMART SM00342 171 254 4.3E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 SUPERFAMILY SSF46689 155 202 1.61E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 PANTHER PTHR11019 153 254 3.9E-38 T 22-04-2016 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 Gene3D G3DSA:1.10.10.60 209 254 7.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 1.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 1.7E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 Gene3D G3DSA:1.10.10.60 151 208 1.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 SUPERFAMILY SSF46689 208 254 9.86E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16545 d2c81dc3e63f3789a033edc91e7ff14a 257 Pfam PF12833 Helix-turn-helix domain 177 253 5.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS29140 65abc41a6a6f3b209f1f91c536bc6197 377 Pfam PF13676 TIR domain 4 103 2.2E-22 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS29140 65abc41a6a6f3b209f1f91c536bc6197 377 Gene3D G3DSA:3.40.50.10140 4 99 2.8E-15 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS29140 65abc41a6a6f3b209f1f91c536bc6197 377 SUPERFAMILY SSF52200 3 102 3.14E-24 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS29140 65abc41a6a6f3b209f1f91c536bc6197 377 SMART SM00255 1 134 1.5E-7 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 PANTHER PTHR18896 29 418 2.8E-12 T 22-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 SUPERFAMILY SSF56024 258 395 3.14E-24 T 22-04-2016 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 SMART SM00155 351 378 0.0021 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 SMART SM00155 137 164 0.009 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 Pfam PF00614 Phospholipase D Active site motif 140 164 5.2E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 SUPERFAMILY SSF56024 10 249 5.38E-30 T 22-04-2016 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 Pfam PF13091 PLD-like domain 265 392 3.4E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 Gene3D G3DSA:3.30.870.10 26 251 7.0E-27 T 22-04-2016 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 Gene3D G3DSA:3.30.870.10 262 394 4.3E-19 T 22-04-2016 TMO_RS03880 8da7be1a611ed3587ed332e06ac611c8 508 PANTHER PTHR18896:SF80 29 418 2.8E-12 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Pfam PF00501 AMP-binding enzyme 24 413 3.1E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 SUPERFAMILY SSF56801 13 509 4.97E-131 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:3.30.300.30 408 508 8.7E-27 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 497 3.7E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 PANTHER PTHR24096 19 504 1.0E-124 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:2.30.38.10 330 407 3.3E-20 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:3.40.50.980 172 329 1.9E-29 T 22-04-2016 TMO_RS03495 933589b4288c8eea3023643f70de2e15 513 Gene3D G3DSA:3.40.50.980 22 171 3.4E-31 T 22-04-2016 TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 Pfam PF13409 Glutathione S-transferase, N-terminal domain 57 162 1.1E-21 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 PANTHER PTHR32419 1 322 1.0E-152 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 Gene3D G3DSA:3.40.30.10 121 169 2.7E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 Gene3D G3DSA:3.40.30.10 36 84 2.7E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 Gene3D G3DSA:1.20.1050.10 179 298 1.5E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 Pfam PF13410 Glutathione S-transferase, C-terminal domain 211 276 2.6E-11 T 22-04-2016 TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 PIRSF PIRSF015753 4 330 1.1E-117 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 SUPERFAMILY SSF47616 189 324 1.38E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 SUPERFAMILY SSF52833 39 94 6.81E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15220 9efbfdafb75836f5ab716740e58b63cb 338 SUPERFAMILY SSF52833 130 166 6.81E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS13765 0cc305352e4af0f3ab818111fe359338 282 Gene3D G3DSA:1.10.3720.10 78 276 5.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13765 0cc305352e4af0f3ab818111fe359338 282 PANTHER PTHR30151:SF8 34 277 7.0E-65 T 22-04-2016 TMO_RS13765 0cc305352e4af0f3ab818111fe359338 282 PANTHER PTHR30151 34 277 7.0E-65 T 22-04-2016 TMO_RS13765 0cc305352e4af0f3ab818111fe359338 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 274 4.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13765 0cc305352e4af0f3ab818111fe359338 282 SUPERFAMILY SSF161098 80 266 9.81E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 PANTHER PTHR32552 66 735 3.0E-86 T 22-04-2016 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 167 1.3E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 SUPERFAMILY SSF56935 68 317 8.43E-75 T 22-04-2016 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 SUPERFAMILY SSF56935 351 735 8.43E-75 T 22-04-2016 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 Gene3D G3DSA:2.40.170.20 185 735 5.1E-53 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 Pfam PF00593 TonB dependent receptor 485 732 9.3E-19 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 PANTHER PTHR32552:SF19 66 735 3.0E-86 T 22-04-2016 TMO_RS06605 bf4b01558c850a51a63931d1b1ff8d82 735 Gene3D G3DSA:2.170.130.10 26 171 1.6E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS22030 eaab8587026a9f6efa6b657df0a84443 300 PANTHER PTHR13789:SF251 214 297 6.7E-19 T 22-04-2016 TMO_RS22030 eaab8587026a9f6efa6b657df0a84443 300 SUPERFAMILY SSF51905 242 299 4.81E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS22030 eaab8587026a9f6efa6b657df0a84443 300 PANTHER PTHR13789 214 297 6.7E-19 T 22-04-2016 TMO_RS22030 eaab8587026a9f6efa6b657df0a84443 300 Gene3D G3DSA:3.50.50.60 237 275 2.9E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 280 4.5E-30 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 SUPERFAMILY SSF51735 3 186 1.28E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 SUPERFAMILY SSF48179 186 284 7.4E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 PIRSF PIRSF000105 1 286 1.9E-83 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 Gene3D G3DSA:1.10.1040.10 188 282 1.2E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 185 5.0E-57 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 PANTHER PTHR23309 4 282 6.6E-113 T 22-04-2016 TMO_RS03195 5e55ec91a82b060c463bb5f4a332f085 286 Gene3D G3DSA:3.40.50.720 4 187 5.8E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Pfam PF00501 AMP-binding enzyme 21 467 3.8E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 PANTHER PTHR24096 3 601 5.5E-132 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 SUPERFAMILY SSF56801 6 284 3.53E-107 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 SUPERFAMILY SSF56801 336 598 3.53E-107 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Gene3D G3DSA:3.40.50.980 185 279 2.1E-23 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Gene3D G3DSA:3.40.50.980 333 397 2.1E-23 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Gene3D G3DSA:2.30.38.10 408 461 9.5E-17 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 PANTHER PTHR24096:SF193 3 601 5.5E-132 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Gene3D G3DSA:3.40.50.980 7 184 1.8E-29 T 22-04-2016 TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS10240 6892774332eaa213b2a2451544ff4146 611 Gene3D G3DSA:3.30.300.30 467 588 2.5E-7 T 22-04-2016 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 SUPERFAMILY SSF48013 3 143 8.63E-36 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 Pfam PF01029 NusB family 6 139 5.5E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 Gene3D G3DSA:1.10.940.10 2 145 6.0E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 143 20.956 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 140 3.4E-40 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 TMO_RS09150 88480a88b77d29740c90c437955b49a0 158 PANTHER PTHR11078 1 156 6.0E-35 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 TMO_RS29065 7356f3f6b96fb2e664f85548c6b9f388 331 Pfam PF13432 Tetratricopeptide repeat 214 266 3.2E-6 T 22-04-2016 TMO_RS29065 7356f3f6b96fb2e664f85548c6b9f388 331 Gene3D G3DSA:1.25.40.10 214 313 3.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS29065 7356f3f6b96fb2e664f85548c6b9f388 331 SUPERFAMILY SSF48452 208 316 9.49E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS29065 7356f3f6b96fb2e664f85548c6b9f388 331 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 214 316 1.4E-30 T 22-04-2016 IPR014162 Tol-Pal system, YbgF TMO_RS29065 7356f3f6b96fb2e664f85548c6b9f388 331 Pfam PF13174 Tetratricopeptide repeat 284 312 0.018 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SUPERFAMILY SSF50998 73 449 3.66E-68 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 348 379 790.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 398 429 0.073 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 310 341 3.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 173 204 13.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 125 157 0.026 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 SMART SM00564 212 244 25.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 PANTHER PTHR32303 45 447 1.9E-17 T 22-04-2016 TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 Gene3D G3DSA:2.140.10.10 27 39 1.5E-65 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 Gene3D G3DSA:2.140.10.10 76 457 1.5E-65 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 397 457 1.2E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 108 158 9.8E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS09475 8f0e21a599125a31874b25dcad7a06a2 458 Pfam PF13360 PQQ-like domain 169 377 1.8E-42 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 PANTHER PTHR11814 9 581 1.4E-163 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 Pfam PF00916 Sulfate permease family 25 405 7.2E-90 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 Gene3D G3DSA:3.30.750.24 459 567 6.7E-17 T 22-04-2016 IPR002645 STAS domain TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 TIGRFAM TIGR00815 sulP: sulfate permease 9 552 1.3E-119 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 SUPERFAMILY SSF52091 456 568 1.69E-17 T 22-04-2016 IPR002645 STAS domain TMO_RS06370 4cbd0e312866fe84b44d242482a742e4 584 Pfam PF01740 STAS domain 460 563 9.1E-17 T 22-04-2016 IPR002645 STAS domain TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 PANTHER PTHR30050 1 223 5.0E-37 T 22-04-2016 TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 SUPERFAMILY SSF52540 11 198 8.99E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 Gene3D G3DSA:1.10.8.60 157 219 6.2E-13 T 22-04-2016 TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 Gene3D G3DSA:3.40.50.300 1 148 2.3E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 Pfam PF00308 Bacterial dnaA protein 87 188 4.0E-5 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA TMO_RS09235 a0fce573b896dad0f2872967e3fc7fb3 235 PANTHER PTHR30050:SF5 1 223 5.0E-37 T 22-04-2016 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 SUPERFAMILY SSF53697 124 269 1.87E-17 T 22-04-2016 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 Gene3D G3DSA:3.40.50.10490 113 278 1.3E-14 T 22-04-2016 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 Gene3D G3DSA:1.10.10.10 8 82 1.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 PANTHER PTHR30514 9 311 6.5E-36 T 22-04-2016 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 PANTHER PTHR30514:SF3 9 311 6.5E-36 T 22-04-2016 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 Pfam PF01380 SIS domain 139 263 7.5E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 SUPERFAMILY SSF46689 9 81 5.73E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14210 8e789551494679de3e189dc7ac627bee 328 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 73 1.5E-10 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 TMO_RS28905 95ec24f47f6c64c37e122bf6fcc00c59 181 Pfam PF09374 Predicted Peptidoglycan domain 108 167 3.0E-11 T 22-04-2016 IPR018537 Peptidoglycan binding domain TMO_RS28905 95ec24f47f6c64c37e122bf6fcc00c59 181 Gene3D G3DSA:1.20.141.10 4 170 6.5E-37 T 22-04-2016 TMO_RS28905 95ec24f47f6c64c37e122bf6fcc00c59 181 SUPERFAMILY SSF53955 5 170 2.17E-35 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS28905 95ec24f47f6c64c37e122bf6fcc00c59 181 Pfam PF05838 Glycosyl hydrolase 108 12 102 5.9E-12 T 22-04-2016 IPR008565 Protein of unknown function DUF847 TMO_RS00125 b515b4401ddfcaa4787b31aa974e06e4 174 PANTHER PTHR31793 39 167 2.4E-31 T 22-04-2016 TMO_RS00125 b515b4401ddfcaa4787b31aa974e06e4 174 SUPERFAMILY SSF54637 36 166 1.67E-34 T 22-04-2016 IPR029069 HotDog domain TMO_RS00125 b515b4401ddfcaa4787b31aa974e06e4 174 Gene3D G3DSA:3.10.129.10 37 169 1.2E-35 T 22-04-2016 IPR029069 HotDog domain TMO_RS00125 b515b4401ddfcaa4787b31aa974e06e4 174 Pfam PF13279 Thioesterase-like superfamily 45 162 8.1E-13 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 ProSitePatterns PS00080 Multicopper oxidases signature 2. 579 590 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 SUPERFAMILY SSF49503 169 382 2.23E-60 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Pfam PF00394 Multicopper oxidase 227 347 2.2E-28 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709 63 206 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709 249 367 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709 457 596 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 4 597 2.7E-246 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 SUPERFAMILY SSF49503 453 596 6.19E-36 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Gene3D G3DSA:2.60.40.420 172 378 3.9E-54 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 ProSitePatterns PS00079 Multicopper oxidases signature 1. 574 594 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Gene3D G3DSA:2.60.40.420 476 600 9.0E-37 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Pfam PF07731 Multicopper oxidase 479 598 8.0E-27 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Gene3D G3DSA:2.60.40.420 47 171 5.7E-29 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709:SF33 63 206 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709:SF33 249 367 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 PANTHER PTHR11709:SF33 457 596 1.3E-98 T 22-04-2016 TMO_RS11265 03434c77760137edb8461163ae865a3f 606 SUPERFAMILY SSF49503 57 196 1.13E-37 T 22-04-2016 IPR008972 Cupredoxin TMO_RS11265 03434c77760137edb8461163ae865a3f 606 Pfam PF07732 Multicopper oxidase 64 165 5.9E-35 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 TMO_RS03850 c0550f23e80cb8beeec2b80553b2edba 301 PIRSF PIRSF038471 11 286 2.5E-51 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_RS03850 c0550f23e80cb8beeec2b80553b2edba 301 Pfam PF04085 rod shape-determining protein MreC 135 274 7.6E-29 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_RS03850 c0550f23e80cb8beeec2b80553b2edba 301 PANTHER PTHR34138 9 275 1.7E-40 T 22-04-2016 TMO_RS03850 c0550f23e80cb8beeec2b80553b2edba 301 PANTHER PTHR34138:SF1 9 275 1.7E-40 T 22-04-2016 TMO_RS03850 c0550f23e80cb8beeec2b80553b2edba 301 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 44 274 4.6E-28 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 Gene3D G3DSA:3.40.50.720 8 258 6.4E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 3.9E-81 T 22-04-2016 TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PANTHER PTHR24322:SF317 17 148 4.6E-48 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PANTHER PTHR24322:SF317 164 196 4.6E-48 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PANTHER PTHR24322 17 148 4.6E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PANTHER PTHR24322 164 196 4.6E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 SUPERFAMILY SSF51735 12 258 4.56E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS11365 d091de94a9df3fa7a1310e385d1bad79 260 PIRSF PIRSF000094 7 260 2.2E-85 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 TMO_RS12910 b44b1d651a09b7c54fd309d1cdfa0929 309 Pfam PF08904 Domain of unknown function (DUF1849) 56 301 3.8E-65 T 22-04-2016 IPR015000 Protein of unknown function DUF1849 TMO_RS16650 94d0a3fecf17dbffdcad0c232ff5590f 295 PANTHER PTHR32243:SF13 4 294 2.0E-96 T 22-04-2016 TMO_RS16650 94d0a3fecf17dbffdcad0c232ff5590f 295 Gene3D G3DSA:1.10.3720.10 61 292 2.5E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16650 94d0a3fecf17dbffdcad0c232ff5590f 295 SUPERFAMILY SSF161098 55 283 9.94E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16650 94d0a3fecf17dbffdcad0c232ff5590f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 293 7.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16650 94d0a3fecf17dbffdcad0c232ff5590f 295 PANTHER PTHR32243 4 294 2.0E-96 T 22-04-2016 TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 SUPERFAMILY SSF54637 14 154 1.15E-44 T 22-04-2016 IPR029069 HotDog domain TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 15 154 9.1E-54 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 Pfam PF07977 FabA-like domain 24 148 4.4E-34 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 Gene3D G3DSA:3.10.129.10 11 156 3.0E-53 T 22-04-2016 IPR029069 HotDog domain TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 15 156 32.821 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 TMO_RS08900 7e737acc24219dfd3919d644142277c0 158 PANTHER PTHR30272 14 158 1.8E-64 T 22-04-2016 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 11 198 3.1E-53 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 SUPERFAMILY SSF53850 10 221 7.6E-60 T 22-04-2016 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 PANTHER PTHR21403:SF3 11 223 7.0E-76 T 22-04-2016 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 10 222 47.485 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 Gene3D G3DSA:3.40.190.10 11 156 4.0E-37 T 22-04-2016 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 Pfam PF01634 ATP phosphoribosyltransferase 62 218 3.1E-44 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 TMO_RS05040 fbea45d8074faf9ab3b3d9c07df373cc 227 PANTHER PTHR21403 11 223 7.0E-76 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 TMO_RS13895 364219146dc307d9ab1edf8939bdd369 232 SUPERFAMILY SSF52833 62 228 4.58E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS13895 364219146dc307d9ab1edf8939bdd369 232 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_RS13895 364219146dc307d9ab1edf8939bdd369 232 Pfam PF13462 Thioredoxin 63 229 2.8E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS13895 364219146dc307d9ab1edf8939bdd369 232 Gene3D G3DSA:3.40.30.10 63 229 2.1E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS13895 364219146dc307d9ab1edf8939bdd369 232 PANTHER PTHR13887 62 231 9.8E-37 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PANTHER PTHR10110 10 523 9.4E-79 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 SMART SM00100 718 830 3.5E-25 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PANTHER PTHR10110:SF86 648 681 9.4E-79 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 780 797 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PANTHER PTHR10110:SF86 10 523 9.4E-79 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 754 768 2.0E-7 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 739 753 2.0E-7 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 778 787 2.0E-7 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 790 801 2.0E-7 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PRINTS PR00103 cAMP-dependent protein kinase signature 811 823 2.0E-7 T 22-04-2016 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 Pfam PF00027 Cyclic nucleotide-binding domain 740 818 7.7E-21 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 PANTHER PTHR10110 648 681 9.4E-79 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 SUPERFAMILY SSF51206 711 829 1.44E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 Pfam PF00999 Sodium/hydrogen exchanger family 14 428 7.5E-49 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_RS03400 93ba631554a307d0d0e6f41146566178 841 Gene3D G3DSA:2.60.120.10 710 835 5.0E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 Gene3D G3DSA:1.10.10.60 153 211 1.5E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 Gene3D G3DSA:1.10.10.60 212 255 6.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 SUPERFAMILY SSF51182 30 199 1.6E-15 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 PANTHER PTHR11019 24 257 1.2E-65 T 22-04-2016 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 Gene3D G3DSA:2.60.120.280 17 93 1.1E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 Pfam PF12833 Helix-turn-helix domain 180 256 2.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 SMART SM00342 174 256 3.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 211 252 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 PANTHER PTHR11019:SF99 24 257 1.2E-65 T 22-04-2016 TMO_RS02775 e3ee6f3e54ff10ee277435bdbe12aa70 263 SUPERFAMILY SSF46689 211 256 1.21E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS09620 a4b760463de707819fae77b7f064df5f 97 Pfam PF02036 SCP-2 sterol transfer family 5 97 4.8E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain TMO_RS09620 a4b760463de707819fae77b7f064df5f 97 PANTHER PTHR10094 43 97 3.0E-13 T 22-04-2016 TMO_RS09620 a4b760463de707819fae77b7f064df5f 97 PANTHER PTHR10094:SF12 43 97 3.0E-13 T 22-04-2016 TMO_RS09620 a4b760463de707819fae77b7f064df5f 97 Gene3D G3DSA:3.30.1050.10 6 97 7.3E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain TMO_RS09620 a4b760463de707819fae77b7f064df5f 97 SUPERFAMILY SSF55718 9 97 3.53E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain TMO_RS12000 d6e8a0be7cf8ab8485c44d1eb45c3338 181 Pfam PF11985 Protein of unknown function (DUF3486) 1 179 2.6E-43 T 22-04-2016 IPR021874 Bacteriophage Mu, Gp27 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 Gene3D G3DSA:1.10.630.10 7 353 1.2E-47 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PANTHER PTHR11712 53 351 3.5E-18 T 22-04-2016 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 106 121 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 148 170 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 296 305 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 225 236 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 89 105 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 PRINTS PR00359 B-class P450 signature 305 316 2.6E-16 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS17060 b7d3b1629d0d1e1884a6ca7f754ab57e 363 SUPERFAMILY SSF48264 4 353 2.49E-36 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 PANTHER PTHR32507:SF7 1 567 1.4E-179 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 PANTHER PTHR32507 1 567 1.4E-179 T 22-04-2016 TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 SUPERFAMILY SSF56176 496 559 8.45E-6 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 Gene3D G3DSA:3.30.465.10 497 565 1.0E-5 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 Pfam PF03471 Transporter associated domain 495 567 2.3E-7 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 SMART SM01091 491 568 1.4E-5 T 22-04-2016 IPR005170 Transporter-associated domain TMO_RS11720 99f11eeb97aa6732de3b813cb0ae739d 568 Pfam PF00999 Sodium/hydrogen exchanger family 14 393 9.7E-50 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 PANTHER PTHR12418:SF28 28 150 2.2E-30 T 22-04-2016 TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 Gene3D G3DSA:3.10.129.10 26 151 5.4E-32 T 22-04-2016 IPR029069 HotDog domain TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 SUPERFAMILY SSF54637 18 151 5.25E-33 T 22-04-2016 IPR029069 HotDog domain TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 PANTHER PTHR12418 28 150 2.2E-30 T 22-04-2016 TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 Pfam PF03061 Thioesterase superfamily 65 139 3.5E-17 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS00710 a021ff2c65ba818e30e984d92709c597 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 32 128 1.1E-16 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 PANTHER PTHR30388 48 238 3.4E-59 T 22-04-2016 TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 PANTHER PTHR30388 5 31 3.4E-59 T 22-04-2016 TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 PANTHER PTHR30388:SF4 48 238 3.4E-59 T 22-04-2016 TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 PANTHER PTHR30388:SF4 5 31 3.4E-59 T 22-04-2016 TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 Pfam PF13478 XdhC Rossmann domain 83 224 1.8E-40 T 22-04-2016 IPR027051 XdhC Rossmann domain TMO_RS05895 4312ff3ecb8473487df2f1c47101a92f 243 Gene3D G3DSA:3.40.50.720 81 169 2.5E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04325 2d8237103a48bcd7428034547712072a 259 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 258 2.1E-106 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 SUPERFAMILY SSF51735 4 258 1.67E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PANTHER PTHR24322:SF328 10 138 1.6E-52 T 22-04-2016 TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PANTHER PTHR24322:SF328 154 186 1.6E-52 T 22-04-2016 TMO_RS04325 2d8237103a48bcd7428034547712072a 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PANTHER PTHR24322 10 138 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PANTHER PTHR24322 154 186 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 9.2E-54 T 22-04-2016 TMO_RS04325 2d8237103a48bcd7428034547712072a 259 Gene3D G3DSA:3.40.50.720 2 258 1.1E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04325 2d8237103a48bcd7428034547712072a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 Gene3D G3DSA:1.10.3720.10 3 281 8.9E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 282 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 PANTHER PTHR32243:SF31 149 291 2.7E-83 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 PANTHER PTHR32243:SF31 1 133 2.7E-83 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 SUPERFAMILY SSF161098 3 288 2.09E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 PANTHER PTHR32243 149 291 2.7E-83 T 22-04-2016 TMO_RS16280 622cf2b471755f8863357319d45ffa71 292 PANTHER PTHR32243 1 133 2.7E-83 T 22-04-2016 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 PANTHER PTHR30537 2 294 6.6E-83 T 22-04-2016 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 Pfam PF03466 LysR substrate binding domain 94 292 7.4E-30 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:3.40.190.10 179 263 5.0E-13 T 22-04-2016 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 PANTHER PTHR30537:SF26 2 294 6.6E-83 T 22-04-2016 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:1.10.10.10 5 87 3.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 SUPERFAMILY SSF46785 6 89 1.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 SUPERFAMILY SSF53850 94 295 8.69E-33 T 22-04-2016 TMO_RS02025 8e12ab037861cc9c924cd4e521e6190a 298 Gene3D G3DSA:3.40.190.10 98 178 2.6E-21 T 22-04-2016 TMO_RS10460 3cef1994c9e2f7a38f493e0553cd029d 670 PANTHER PTHR12815 241 670 1.5E-61 T 22-04-2016 TMO_RS10460 3cef1994c9e2f7a38f493e0553cd029d 670 Pfam PF01103 Surface antigen 378 670 2.1E-48 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 TMO_RS10460 3cef1994c9e2f7a38f493e0553cd029d 670 PANTHER PTHR12815:SF11 241 670 1.5E-61 T 22-04-2016 TMO_RS10460 3cef1994c9e2f7a38f493e0553cd029d 670 Gene3D G3DSA:2.40.160.50 368 670 1.8E-28 T 22-04-2016 TMO_RS09465 f94bad48a1ba51e31c2936cf0f222c85 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 314 1.6E-74 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS09465 f94bad48a1ba51e31c2936cf0f222c85 329 PANTHER PTHR10314 8 328 7.4E-135 T 22-04-2016 TMO_RS09465 f94bad48a1ba51e31c2936cf0f222c85 329 PANTHER PTHR10314:SF124 8 328 7.4E-135 T 22-04-2016 TMO_RS09465 f94bad48a1ba51e31c2936cf0f222c85 329 Gene3D G3DSA:3.40.50.1100 74 326 7.9E-69 T 22-04-2016 TMO_RS09465 f94bad48a1ba51e31c2936cf0f222c85 329 SUPERFAMILY SSF53686 8 322 1.57E-91 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 128 149 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 86 106 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 44 64 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 107 127 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 65 85 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 3 22 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PRINTS PR00601 Bacterioferritin signature 23 43 1.5E-69 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PANTHER PTHR30295 1 152 1.1E-56 T 22-04-2016 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 Gene3D G3DSA:1.20.1260.10 1 154 1.4E-63 T 22-04-2016 IPR012347 Ferritin-related TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PIRSF PIRSF002560 1 157 8.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 PANTHER PTHR30295:SF9 1 152 1.1E-56 T 22-04-2016 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 SUPERFAMILY SSF47240 1 153 2.24E-53 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 Pfam PF00210 Ferritin-like domain 8 142 5.9E-41 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_RS03155 ac3a3fe8e7257e086f09b3ae3946ff88 160 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 3.8E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 TMO_RS09600 af668f6c7a8964cc0dcf46f3f9033b3a 218 PANTHER PTHR11579:SF0 1 172 1.1E-32 T 22-04-2016 TMO_RS09600 af668f6c7a8964cc0dcf46f3f9033b3a 218 SUPERFAMILY SSF53335 1 192 3.47E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09600 af668f6c7a8964cc0dcf46f3f9033b3a 218 Gene3D G3DSA:3.40.50.150 18 204 3.7E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09600 af668f6c7a8964cc0dcf46f3f9033b3a 218 PANTHER PTHR11579 1 172 1.1E-32 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 TMO_RS09600 af668f6c7a8964cc0dcf46f3f9033b3a 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 177 6.9E-37 T 22-04-2016 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 472 643 6.02E-30 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 20 95 1.5E-10 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 291 360 8.2E-11 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 114 279 1.5E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Gene3D G3DSA:2.150.10.10 468 657 2.7E-30 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 221 237 0.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 62 78 0.086 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 150 166 0.016 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 26 42 36.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 485 502 0.033 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 574 590 0.017 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 309 324 0.092 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 239 254 0.15 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 61 0.076 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 379 395 0.79 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 468 483 1.0 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 415 430 3.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 203 219 2.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 133 149 0.0024 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 556 572 0.079 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 326 342 0.011 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 397 413 5.7 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 10 84 7.85E-13 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 147 165 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 411 429 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 402 420 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 50 68 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 138 156 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 59 77 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 570 588 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 491 509 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 69 158 6.67E-15 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 247 345 3.53E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 158 282 7.33E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 SUPERFAMILY SSF51120 335 462 7.19E-14 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 604 683 2.3E-4 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 327 335 1.1E-10 T 22-04-2016 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 336 345 1.1E-10 T 22-04-2016 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 130 141 1.1E-10 T 22-04-2016 TMO_RS03185 b16b7584bb2986121567183d1bdb8d35 690 PRINTS PR00313 NodO calcium binding signature 309 317 1.1E-10 T 22-04-2016 TMO_RS06995 e358b33cc32657fd70f28bd5956a5eee 294 SUPERFAMILY SSF161098 13 285 2.62E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06995 e358b33cc32657fd70f28bd5956a5eee 294 Gene3D G3DSA:1.10.3720.10 17 286 7.2E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06995 e358b33cc32657fd70f28bd5956a5eee 294 PANTHER PTHR30193:SF10 1 286 1.6E-73 T 22-04-2016 TMO_RS06995 e358b33cc32657fd70f28bd5956a5eee 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 280 1.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06995 e358b33cc32657fd70f28bd5956a5eee 294 PANTHER PTHR30193 1 286 1.6E-73 T 22-04-2016 TMO_RS14145 2b386baa71c68d79fb6247c9e5c5bb53 334 PANTHER PTHR35457 3 326 2.0E-51 T 22-04-2016 TMO_RS14145 2b386baa71c68d79fb6247c9e5c5bb53 334 PANTHER PTHR35457:SF1 3 326 2.0E-51 T 22-04-2016 TMO_RS14145 2b386baa71c68d79fb6247c9e5c5bb53 334 Pfam PF02628 Cytochrome oxidase assembly protein 13 302 1.0E-49 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 SUPERFAMILY SSF46785 2 95 1.67E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 SMART SM00418 8 90 1.4E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 PANTHER PTHR33154 10 102 7.5E-18 T 22-04-2016 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 1.0E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 Gene3D G3DSA:1.10.10.10 2 103 6.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01055 2eabee7b6f4af33878a1ccdb4b62d8a1 108 Pfam PF12840 Helix-turn-helix domain 9 70 5.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 Pfam PF07549 SecD/SecF GG Motif 37 62 1.1E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 PANTHER PTHR30081 9 303 9.5E-76 T 22-04-2016 TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 Gene3D G3DSA:1.20.1640.10 101 300 7.6E-33 T 22-04-2016 TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 Pfam PF02355 Protein export membrane protein 114 297 4.1E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 119 286 1.8E-57 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 300 28.647 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 289 1.5E-84 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 SUPERFAMILY SSF82866 77 296 1.96E-41 T 22-04-2016 TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 2.0E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 2.0E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 2.0E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS07785 ece092efd8f0b9fc2d3e07c75505f347 322 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 2.0E-33 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 SUPERFAMILY SSF52540 60 250 3.11E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 Gene3D G3DSA:3.40.50.300 60 245 3.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 SUPERFAMILY SSF52540 480 547 1.68E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 SUPERFAMILY SSF52540 231 294 1.68E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 SUPERFAMILY SSF52540 329 410 1.68E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 Pfam PF13538 UvrD-like helicase C-terminal domain 487 537 7.8E-16 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 Gene3D G3DSA:3.40.50.300 476 540 8.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 Gene3D G3DSA:3.40.50.300 246 356 8.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04290 36de417a66e4323eeab5a3722d445800 754 Pfam PF13604 AAA domain 81 199 2.6E-13 T 22-04-2016 TMO_RS07595 b7673aeebddfc4561d91c914745d75f3 348 SUPERFAMILY SSF51445 15 330 7.16E-68 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily TMO_RS07595 b7673aeebddfc4561d91c914745d75f3 348 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 25 307 2.8E-53 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_RS07595 b7673aeebddfc4561d91c914745d75f3 348 PANTHER PTHR30480:SF7 16 294 6.6E-92 T 22-04-2016 TMO_RS07595 b7673aeebddfc4561d91c914745d75f3 348 Gene3D G3DSA:3.20.20.300 16 322 5.6E-70 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 TMO_RS07595 b7673aeebddfc4561d91c914745d75f3 348 PANTHER PTHR30480 16 294 6.6E-92 T 22-04-2016 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 PANTHER PTHR19211 1 102 4.3E-17 T 22-04-2016 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 PANTHER PTHR19211:SF6 126 214 4.3E-17 T 22-04-2016 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 PANTHER PTHR19211 126 214 4.3E-17 T 22-04-2016 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 Pfam PF00005 ABC transporter 162 199 7.5E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 Gene3D G3DSA:3.40.50.300 162 213 1.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 PANTHER PTHR19211:SF6 1 102 4.3E-17 T 22-04-2016 TMO_RS18820 6068c33aaa9792758d5440d33ff33475 214 SUPERFAMILY SSF52540 159 209 1.63E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 Pfam PF01047 MarR family 35 92 1.1E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 SMART SM00347 28 128 4.1E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 SUPERFAMILY SSF46785 17 144 8.95E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 7.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 7.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 7.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 Gene3D G3DSA:1.10.10.10 23 143 1.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03525 c6a7d1578f5c24afacef0f27aa74ae08 149 PANTHER PTHR18964 25 142 1.5E-20 T 22-04-2016 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 SUPERFAMILY SSF51391 4 205 4.97E-60 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 194 3.7E-51 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 PANTHER PTHR20857 2 186 7.5E-48 T 22-04-2016 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 209 22.773 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 Pfam PF02581 Thiamine monophosphate synthase/TENI 9 188 9.0E-53 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 Gene3D G3DSA:3.20.20.70 4 209 2.5E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS04445 be1476c261f2e9ae45367406bc0035cd 222 PANTHER PTHR20857:SF15 2 186 7.5E-48 T 22-04-2016 TMO_RS15035 1d993400b8ab6c7ae0c14e93ea826279 271 Pfam PF13668 Ferritin-like domain 34 162 4.8E-5 T 22-04-2016 TMO_RS15035 1d993400b8ab6c7ae0c14e93ea826279 271 Gene3D G3DSA:1.10.620.20 16 173 1.5E-14 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 TMO_RS15035 1d993400b8ab6c7ae0c14e93ea826279 271 SUPERFAMILY SSF47240 1 251 5.08E-42 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 Gene3D G3DSA:3.30.70.580 1 106 7.7E-33 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 PIRSF PIRSF001430 1 246 1.6E-70 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 33.345 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 Gene3D G3DSA:3.30.70.660 108 243 5.5E-51 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 PANTHER PTHR11142 1 246 3.5E-89 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 Pfam PF01416 tRNA pseudouridine synthase 8 104 1.2E-8 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 4.7E-32 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 SUPERFAMILY SSF55120 1 246 5.32E-83 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13610 c293f720e89639521f37f4aecc5255e5 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 7.8E-57 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:1.10.10.10 8 88 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 PANTHER PTHR30346 8 298 2.7E-38 T 22-04-2016 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 SUPERFAMILY SSF46785 8 116 9.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 SUPERFAMILY SSF53850 95 292 2.53E-22 T 22-04-2016 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 Pfam PF03466 LysR substrate binding domain 94 291 1.2E-20 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 3.9E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:3.40.190.10 213 266 6.0E-5 T 22-04-2016 TMO_RS02030 70be768729d9cf27bf0ae1a45dc9e73f 302 Gene3D G3DSA:3.40.190.10 89 198 5.9E-12 T 22-04-2016 TMO_RS01205 9eef40ee84772c05199b8113ce7fd99c 200 Gene3D G3DSA:1.10.3150.10 68 153 2.0E-4 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD TMO_RS01205 9eef40ee84772c05199b8113ce7fd99c 200 PANTHER PTHR40202:SF1 26 199 2.4E-23 T 22-04-2016 TMO_RS01205 9eef40ee84772c05199b8113ce7fd99c 200 SUPERFAMILY SSF109604 19 164 4.81E-25 T 22-04-2016 TMO_RS01205 9eef40ee84772c05199b8113ce7fd99c 200 PANTHER PTHR40202 26 199 2.4E-23 T 22-04-2016 TMO_RS01205 9eef40ee84772c05199b8113ce7fd99c 200 Pfam PF01966 HD domain 62 130 4.8E-6 T 22-04-2016 IPR006674 HD domain TMO_RS14925 3a224dfebaa3f3ee723985fe56a1f22c 87 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 5 72 6.4E-22 T 22-04-2016 IPR022789 Antitoxin ParD TMO_RS14925 3a224dfebaa3f3ee723985fe56a1f22c 87 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 8 78 6.7E-9 T 22-04-2016 IPR022789 Antitoxin ParD TMO_RS14925 3a224dfebaa3f3ee723985fe56a1f22c 87 SUPERFAMILY SSF47598 2 46 3.11E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 TMO_RS14925 3a224dfebaa3f3ee723985fe56a1f22c 87 PANTHER PTHR36582 1 80 1.2E-14 T 22-04-2016 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 Pfam PF00366 Ribosomal protein S17 8 74 1.6E-31 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 3.0E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 3.0E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 3.0E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 1 77 23.516 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 Gene3D G3DSA:2.40.50.140 3 74 6.5E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 PANTHER PTHR10744 1 74 7.7E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 SUPERFAMILY SSF50249 3 74 3.86E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 74 4.2E-36 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13210 1362115c6943656e1205e8d40d3beaa8 78 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 1.0E-26 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PANTHER PTHR24322 23 151 4.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PANTHER PTHR24322 167 205 4.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 SUPERFAMILY SSF51735 16 268 4.23E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 Pfam PF00106 short chain dehydrogenase 20 209 5.9E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 1.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 1.8E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 19 202 0.001 T 22-04-2016 TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 Gene3D G3DSA:3.40.50.720 19 247 3.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PANTHER PTHR24322:SF57 23 151 4.4E-41 T 22-04-2016 TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PANTHER PTHR24322:SF57 167 205 4.4E-41 T 22-04-2016 TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 3.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 3.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS10880 9500d62de67aec27f703b12c391183e6 345 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 3.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 Pfam PF02348 Cytidylyltransferase 5 215 2.2E-35 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 PANTHER PTHR21485 1 241 2.0E-66 T 22-04-2016 TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 SUPERFAMILY SSF53448 1 240 4.73E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 3 234 3.0E-47 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 PANTHER PTHR21485:SF4 1 241 2.0E-66 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 TMO_RS16080 b4c9ad23ad0335bc2efb25e8af0800c9 244 Gene3D G3DSA:3.90.550.10 1 241 4.2E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 SUPERFAMILY SSF89028 6 186 1.67E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 185 1.0E-54 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 Pfam PF01923 Cobalamin adenosyltransferase 7 174 1.9E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 185 1.4E-57 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 Gene3D G3DSA:1.20.1200.10 16 189 1.5E-65 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 TMO_RS00635 cb63ff4b356d91f9766f96fa96fca29a 191 PANTHER PTHR12213 1 186 7.2E-74 T 22-04-2016 TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 SUPERFAMILY SSF50249 4 157 5.83E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 Pfam PF00436 Single-strand binding protein family 5 107 3.0E-39 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 Gene3D G3DSA:2.40.50.140 193 213 2.3E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 Gene3D G3DSA:2.40.50.140 2 128 2.3E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 35.702 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 PANTHER PTHR10302 1 119 9.0E-45 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 TMO_RS07870 248bb1b5174316e601363c392b1b9500 213 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 122 2.3E-44 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:1.10.10.10 6 85 3.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:3.40.190.10 164 264 5.6E-23 T 22-04-2016 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 Gene3D G3DSA:3.40.190.10 86 131 5.9E-4 T 22-04-2016 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 Pfam PF03466 LysR substrate binding domain 90 294 7.9E-37 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 PANTHER PTHR30537 1 293 9.5E-110 T 22-04-2016 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 PANTHER PTHR30537:SF1 1 293 9.5E-110 T 22-04-2016 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 SUPERFAMILY SSF53850 91 295 5.07E-41 T 22-04-2016 TMO_RS07295 7f18e10047ccdc8f26f7853c71c18331 301 SUPERFAMILY SSF46785 6 111 2.93E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13770 f3f81a739fd700d9e9101090ea5b1223 367 Gene3D G3DSA:3.40.190.10 131 251 4.1E-18 T 22-04-2016 TMO_RS13770 f3f81a739fd700d9e9101090ea5b1223 367 PANTHER PTHR30024:SF1 20 273 1.4E-24 T 22-04-2016 TMO_RS13770 f3f81a739fd700d9e9101090ea5b1223 367 PANTHER PTHR30024 20 273 1.4E-24 T 22-04-2016 TMO_RS13770 f3f81a739fd700d9e9101090ea5b1223 367 SUPERFAMILY SSF53850 52 274 1.62E-35 T 22-04-2016 TMO_RS13770 f3f81a739fd700d9e9101090ea5b1223 367 Pfam PF09084 NMT1/THI5 like 88 263 2.6E-20 T 22-04-2016 IPR015168 SsuA/THI5-like TMO_RS00435 a49ca35e6185c0885d1cac801b441d32 258 Gene3D G3DSA:3.40.50.10090 2 95 3.8E-12 T 22-04-2016 TMO_RS00435 a49ca35e6185c0885d1cac801b441d32 258 Gene3D G3DSA:3.40.50.10090 130 236 4.6E-6 T 22-04-2016 TMO_RS00435 a49ca35e6185c0885d1cac801b441d32 258 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 231 5.5E-31 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS00435 a49ca35e6185c0885d1cac801b441d32 258 SUPERFAMILY SSF69618 1 237 1.06E-38 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 TMO_RS08090 00471b3668012b74139c558c129f25a0 370 SUPERFAMILY SSF53850 145 270 1.28E-7 T 22-04-2016 TMO_RS08090 00471b3668012b74139c558c129f25a0 370 PANTHER PTHR33376 1 348 6.7E-110 T 22-04-2016 TMO_RS08090 00471b3668012b74139c558c129f25a0 370 PIRSF PIRSF039026 1 363 7.6E-122 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_RS08090 00471b3668012b74139c558c129f25a0 370 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 322 1.9E-50 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS08090 00471b3668012b74139c558c129f25a0 370 Gene3D G3DSA:3.40.190.10 167 224 5.6E-4 T 22-04-2016 TMO_RS08090 00471b3668012b74139c558c129f25a0 370 PANTHER PTHR33376:SF5 1 348 6.7E-110 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Pfam PF02872 5'-nucleotidase, C-terminal domain 407 603 1.6E-25 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.150.10.10 1363 1506 3.4E-19 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.130.10.10 1066 1125 7.4E-23 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:2.130.10.10 719 980 7.4E-23 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF63829 724 827 4.77E-5 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF51120 1371 1503 1.03E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 322 342 2.69E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 579 598 2.69E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 274 297 2.69E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 490 513 2.69E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR01607 Apyrase family signature 1 13 2.69E-6 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00786 5'-nucleotidase signature 2. 103 114 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF56300 189 354 2.36E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF56300 1 56 2.36E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF56300 90 162 2.36E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF51120 1236 1322 8.02E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1426 1444 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1399 1417 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1408 1426 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575 81 164 3.8E-163 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575 187 461 3.8E-163 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575 1060 1187 3.8E-163 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575 1 57 3.8E-163 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575 484 645 3.8E-163 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:3.90.780.10 407 651 1.3E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 Gene3D G3DSA:3.60.21.10 2 352 5.8E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575:SF7 81 164 3.8E-163 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575:SF7 187 461 3.8E-163 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575:SF7 1060 1187 3.8E-163 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575:SF7 1 57 3.8E-163 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PANTHER PTHR11575:SF7 484 645 3.8E-163 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1189 1249 1.1E-6 T 22-04-2016 IPR010221 VCBS repeat TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF55816 406 609 1.57E-32 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1421 1429 7.94E-9 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1409 1420 7.94E-9 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1439 1447 7.94E-9 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 PRINTS PR00313 NodO calcium binding signature 1460 1469 7.94E-9 T 22-04-2016 TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF50969 1070 1168 3.34E-19 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_RS05350 1cf062e223e4fee8d15facb0d4b217b9 1575 SUPERFAMILY SSF50969 798 997 3.34E-19 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_RS00070 b7c7bfb0fb8f204e76dd5901fd0dde30 230 SUPERFAMILY SSF55821 18 211 3.66E-10 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS00070 b7c7bfb0fb8f204e76dd5901fd0dde30 230 Gene3D G3DSA:3.90.870.10 14 212 3.1E-14 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain TMO_RS00070 b7c7bfb0fb8f204e76dd5901fd0dde30 230 Pfam PF01300 Telomere recombination 24 209 1.7E-8 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 PANTHER PTHR30055 6 207 1.8E-16 T 22-04-2016 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.8E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 SUPERFAMILY SSF46689 10 90 3.03E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 Gene3D G3DSA:1.10.357.10 14 194 9.6E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS12180 de337c0438d8df9ca32f182c6ec0a432 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 3.9E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01170 07b5375717ab5731eec157b1816ad869 303 SUPERFAMILY SSF103481 198 293 1.7E-9 T 22-04-2016 TMO_RS01170 07b5375717ab5731eec157b1816ad869 303 Pfam PF00892 EamA-like transporter family 161 290 1.6E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS01170 07b5375717ab5731eec157b1816ad869 303 Pfam PF00892 EamA-like transporter family 17 144 1.4E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS01170 07b5375717ab5731eec157b1816ad869 303 SUPERFAMILY SSF103481 53 148 5.36E-12 T 22-04-2016 TMO_RS01170 07b5375717ab5731eec157b1816ad869 303 PANTHER PTHR22911 13 302 8.7E-37 T 22-04-2016 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 Gene3D G3DSA:3.20.10.10 135 286 9.8E-41 T 22-04-2016 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 Pfam PF01063 Amino-transferase class IV 40 262 1.1E-38 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 PANTHER PTHR11825 1 281 9.4E-48 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 Gene3D G3DSA:3.30.470.10 12 128 3.0E-18 T 22-04-2016 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 SUPERFAMILY SSF56752 11 286 3.4E-69 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS16100 7734deb23480f411cfeab8f11621200a 289 ProSitePatterns PS00770 Aminotransferases class-IV signature. 188 217 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 TMO_RS09575 24f84ffab627bb24fd3a9557c321f099 351 Gene3D G3DSA:2.120.10.30 18 347 1.2E-43 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS09575 24f84ffab627bb24fd3a9557c321f099 351 SUPERFAMILY SSF63829 9 344 1.32E-38 T 22-04-2016 TMO_RS09575 24f84ffab627bb24fd3a9557c321f099 351 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 30 269 2.1E-16 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 39.536 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 PIRSF PIRSF039093 6 186 4.6E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 SUPERFAMILY SSF56235 9 183 5.7E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 PANTHER PTHR32194 10 184 6.0E-120 T 22-04-2016 TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 1.6E-82 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 Pfam PF00227 Proteasome subunit 11 181 1.8E-22 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 TMO_RS16875 3fae5d9624f3afd762f04491fc1d915b 186 Gene3D G3DSA:3.60.20.10 13 184 3.0E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 PANTHER PTHR11699 5 482 2.8E-199 T 22-04-2016 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 Gene3D G3DSA:3.40.309.10 268 453 1.9E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 Gene3D G3DSA:3.40.605.10 11 267 3.0E-87 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 SUPERFAMILY SSF53720 9 481 8.9E-154 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS03080 96e9d0f20743a5422faeda6047d4c372 492 Pfam PF00171 Aldehyde dehydrogenase family 21 478 6.8E-158 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 Pfam PF04055 Radical SAM superfamily 178 327 3.2E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 SUPERFAMILY SSF102114 164 362 4.71E-22 T 22-04-2016 TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 PANTHER PTHR11918:SF64 81 365 8.2E-27 T 22-04-2016 TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 PANTHER PTHR11918 81 365 8.2E-27 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 Gene3D G3DSA:3.80.30.20 172 360 9.9E-21 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS02480 4c20ede9bd8e4a82f89e0c3149049fe4 449 SMART SM00729 170 374 6.9E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 SMART SM00382 26 221 1.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 Pfam PF00005 ABC transporter 18 163 2.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 SUPERFAMILY SSF52540 1 238 4.64E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 PANTHER PTHR24220:SF350 3 237 2.1E-133 T 22-04-2016 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 SUPERFAMILY SSF54631 265 307 9.04E-5 T 22-04-2016 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 PANTHER PTHR24220 3 237 2.1E-133 T 22-04-2016 TMO_RS08360 2bf4b8381aa0135e2d5c4fb0c8d80e7a 309 Gene3D G3DSA:3.40.50.300 1 236 1.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 PANTHER PTHR18895:SF60 3 136 2.7E-22 T 22-04-2016 TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 130 136 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 PIRSF PIRSF004553 1 196 6.3E-42 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 Pfam PF03602 Conserved hypothetical protein 95 3 192 4.8E-38 T 22-04-2016 TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 SUPERFAMILY SSF53335 3 188 1.13E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 Gene3D G3DSA:3.40.50.150 3 195 1.1E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS14515 74f4bf7da4055ee68945a29066131a7f 211 PANTHER PTHR18895 3 136 2.7E-22 T 22-04-2016 TMO_RS03385 0dc83a5bc23030a00c171891bfbbd65a 422 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 412 2.2E-103 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS03385 0dc83a5bc23030a00c171891bfbbd65a 422 PANTHER PTHR33362 1 421 4.2E-113 T 22-04-2016 TMO_RS03385 0dc83a5bc23030a00c171891bfbbd65a 422 PIRSF PIRSF006066 1 422 4.4E-116 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS03385 0dc83a5bc23030a00c171891bfbbd65a 422 PANTHER PTHR33362:SF6 1 421 4.2E-113 T 22-04-2016 TMO_RS03385 0dc83a5bc23030a00c171891bfbbd65a 422 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 418 4.2E-116 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS07035 47086696632fe0815ce1269ce41570db 332 PANTHER PTHR36698 2 328 1.3E-59 T 22-04-2016 TMO_RS07035 47086696632fe0815ce1269ce41570db 332 PANTHER PTHR36698:SF2 2 328 1.3E-59 T 22-04-2016 TMO_RS07035 47086696632fe0815ce1269ce41570db 332 Pfam PF02470 MlaD protein 42 114 9.4E-12 T 22-04-2016 IPR003399 Mce/MlaD TMO_RS01610 5543131430aeeab3ce6326a01b4543c8 392 SUPERFAMILY SSF53335 12 382 1.66E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01610 5543131430aeeab3ce6326a01b4543c8 392 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 71 318 5.3E-63 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA TMO_RS01610 5543131430aeeab3ce6326a01b4543c8 392 PANTHER PTHR12049 21 382 1.4E-124 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA TMO_RS01610 5543131430aeeab3ce6326a01b4543c8 392 PANTHER PTHR12049:SF7 21 382 1.4E-124 T 22-04-2016 TMO_RS14175 be4c0e162e5d84ca584d4688bf527b43 287 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 280 19.443 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 TMO_RS14175 be4c0e162e5d84ca584d4688bf527b43 287 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 54 76 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site TMO_RS14175 be4c0e162e5d84ca584d4688bf527b43 287 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 2 279 6.1E-99 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 TMO_RS14175 be4c0e162e5d84ca584d4688bf527b43 287 Pfam PF01040 UbiA prenyltransferase family 17 261 2.5E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 TMO_RS14175 be4c0e162e5d84ca584d4688bf527b43 287 PANTHER PTHR11048 2 280 4.9E-78 T 22-04-2016 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 SMART SM00382 35 234 6.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 SMART SM00382 311 502 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Gene3D G3DSA:3.40.50.300 275 526 9.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Gene3D G3DSA:3.40.50.300 5 258 8.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Pfam PF00005 ABC transporter 303 452 2.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Pfam PF00005 ABC transporter 27 184 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 PANTHER PTHR24220:SF132 8 412 3.7E-173 T 22-04-2016 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 SUPERFAMILY SSF52540 6 255 1.78E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 531 0.035 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 274 7.6E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 SUPERFAMILY SSF52540 276 524 1.45E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01400 0fa7ad6e0a24ee87fb75f96dd3c01d29 546 PANTHER PTHR24220 8 412 3.7E-173 T 22-04-2016 TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 Gene3D G3DSA:3.40.50.720 133 299 6.8E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 SUPERFAMILY SSF51735 5 315 2.13E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 Gene3D G3DSA:3.30.1780.10 4 132 1.8E-30 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 PANTHER PTHR13812:SF19 45 311 6.3E-66 T 22-04-2016 TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 55 314 3.8E-49 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 PIRSF PIRSF001439 6 317 3.4E-61 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin TMO_RS03750 fc36bd33ac6ac9d58a3dc46555fec542 317 PANTHER PTHR13812 45 311 6.3E-66 T 22-04-2016 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 Gene3D G3DSA:3.40.50.720 175 291 2.8E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 SUPERFAMILY SSF51735 144 311 6.38E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 SUPERFAMILY SSF50129 2 148 2.59E-56 T 22-04-2016 IPR011032 GroES-like TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 SUPERFAMILY SSF50129 313 341 2.59E-56 T 22-04-2016 IPR011032 GroES-like TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 PANTHER PTHR11695 19 343 6.5E-140 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 SMART SM00829 16 341 1.1E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 Gene3D G3DSA:3.90.180.10 2 174 4.1E-67 T 22-04-2016 IPR011032 GroES-like TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 136 4.1E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 PANTHER PTHR11695:SF280 19 343 6.5E-140 T 22-04-2016 TMO_RS14770 c6bd020356e259fd5334b2e553615d81 343 Pfam PF00107 Zinc-binding dehydrogenase 181 305 6.0E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 PANTHER PTHR11746 143 209 6.5E-13 T 22-04-2016 TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 PANTHER PTHR11746:SF102 143 209 6.5E-13 T 22-04-2016 TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 Hamap MF_00528 Septum formation protein Maf [maf]. 17 211 25.486 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 Gene3D G3DSA:3.90.950.10 16 206 1.5E-48 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 SUPERFAMILY SSF52972 16 205 1.7E-48 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 PIRSF PIRSF006305 10 210 2.6E-39 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS17140 bc04d0b64b788c55802ffdd2464ef365 212 Pfam PF02545 Maf-like protein 17 205 3.3E-39 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 PANTHER PTHR23023:SF30 19 481 1.1E-206 T 22-04-2016 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 SUPERFAMILY SSF51905 21 403 4.21E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 PANTHER PTHR23023 19 481 1.1E-206 T 22-04-2016 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 22 44 4.1E-5 T 22-04-2016 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 195 220 4.1E-5 T 22-04-2016 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 Pfam PF13450 NAD(P)-binding Rossmann-like domain 25 76 1.4E-7 T 22-04-2016 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 Gene3D G3DSA:3.50.50.60 338 476 2.9E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 Gene3D G3DSA:3.50.50.60 21 234 1.5E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01295 9f8048d037c9e56a0fe258916f952d79 505 Pfam PF00743 Flavin-binding monooxygenase-like 96 234 2.3E-12 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS04360 96b90e011cd58a9feb7e7bd159b2a215 326 SUPERFAMILY SSF53822 39 256 1.67E-15 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS04360 96b90e011cd58a9feb7e7bd159b2a215 326 PANTHER PTHR34296 1 326 1.0E-55 T 22-04-2016 TMO_RS04360 96b90e011cd58a9feb7e7bd159b2a215 326 Gene3D G3DSA:3.40.50.2300 155 291 9.3E-38 T 22-04-2016 TMO_RS04360 96b90e011cd58a9feb7e7bd159b2a215 326 Pfam PF02608 Basic membrane protein 38 291 4.0E-50 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 TMO_RS04360 96b90e011cd58a9feb7e7bd159b2a215 326 Gene3D G3DSA:3.40.50.2300 34 154 3.3E-36 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 Gene3D G3DSA:3.40.50.1980 27 174 1.3E-12 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 SUPERFAMILY SSF53807 29 343 2.98E-44 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 Gene3D G3DSA:3.40.50.1980 189 341 1.9E-23 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 PANTHER PTHR30535:SF5 14 374 8.3E-58 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 PANTHER PTHR30535 14 374 8.3E-58 T 22-04-2016 TMO_RS14725 634092df218234b45c27d20b39e3787c 375 Pfam PF01497 Periplasmic binding protein 61 317 5.1E-20 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 43 592 8.7E-155 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 Pfam PF01368 DHH family 97 188 1.4E-8 T 22-04-2016 IPR001667 DDH domain TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 Pfam PF02272 DHHA1 domain 397 455 8.9E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 PANTHER PTHR30255 16 596 5.6E-181 T 22-04-2016 TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 SUPERFAMILY SSF64182 71 473 2.09E-110 T 22-04-2016 TMO_RS09760 7453b143be1318e63e5bf3d862a82e87 596 PANTHER PTHR30255:SF2 16 596 5.6E-181 T 22-04-2016 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 SMART SM00530 82 137 1.9E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 SUPERFAMILY SSF47413 73 143 9.38E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 Pfam PF01381 Helix-turn-helix 85 137 9.3E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 Gene3D G3DSA:1.10.260.40 77 142 1.1E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 PANTHER PTHR10245 50 209 3.3E-23 T 22-04-2016 TMO_RS29670 b3a107af60068895a8b1e8ecf39315b4 235 PANTHER PTHR10245:SF38 50 209 3.3E-23 T 22-04-2016 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 Gene3D G3DSA:2.170.130.10 28 161 3.9E-40 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 PANTHER PTHR32552:SF15 20 631 2.7E-46 T 22-04-2016 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 PANTHER PTHR32552 20 631 2.7E-46 T 22-04-2016 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 SUPERFAMILY SSF56935 38 631 6.72E-111 T 22-04-2016 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 Pfam PF00593 TonB dependent receptor 406 629 5.4E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 156 1.3E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06835 b6c3873b4065ec41062edbf38d661f7c 631 Gene3D G3DSA:2.40.170.20 162 631 1.9E-82 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS09945 130da67b58a32bba8a89be26c998df80 121 PANTHER PTHR11058 1 121 2.6E-69 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 TMO_RS09945 130da67b58a32bba8a89be26c998df80 121 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 23 120 1.1E-40 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 TMO_RS09945 130da67b58a32bba8a89be26c998df80 121 PANTHER PTHR11058:SF10 1 121 2.6E-69 T 22-04-2016 TMO_RS09945 130da67b58a32bba8a89be26c998df80 121 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 4 121 20.097 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 Gene3D G3DSA:3.30.420.10 19 176 2.5E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 PANTHER PTHR12124 6 184 2.8E-86 T 22-04-2016 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 Pfam PF01612 3'-5' exonuclease 19 168 1.7E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 SMART SM00474 1 169 3.7E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 SUPERFAMILY SSF53098 19 190 3.14E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS00940 075ce7dd59455d989ef08f970ae80975 203 PANTHER PTHR12124:SF48 6 184 2.8E-86 T 22-04-2016 TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 Pfam PF01809 Haemolytic domain 2 66 4.9E-28 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 PANTHER PTHR33383 2 76 1.1E-35 T 22-04-2016 TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 67 21.756 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 SMART SM01234 1 66 3.2E-37 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 14 66 2.0E-17 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor TMO_RS13680 46a60a8e145389633e7c25b8d5d24489 86 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 3 69 9.4E-27 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 Hamap MF_01151 Protein GrpE [grpE]. 2 185 19.688 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 ProSitePatterns PS01071 grpE protein signature. 140 183 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 Pfam PF01025 GrpE 30 184 3.0E-50 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 Gene3D G3DSA:2.30.22.10 129 186 1.8E-24 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 PANTHER PTHR21237 12 188 2.6E-62 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 SUPERFAMILY SSF58014 32 129 2.88E-26 T 22-04-2016 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 164 183 4.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 50 66 4.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 137 152 4.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 PRINTS PR00773 GrpE protein signature 78 93 4.9E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 SUPERFAMILY SSF51064 131 186 1.96E-17 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 TMO_RS17490 184134c502772e8048db4fb3356ccbac 206 Gene3D G3DSA:3.90.20.20 32 128 9.7E-31 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.90.76.10 80 174 7.0E-22 T 22-04-2016 TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 PANTHER PTHR30290 1 540 7.8E-116 T 22-04-2016 TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.40.190.10 175 312 2.6E-38 T 22-04-2016 TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 Gene3D G3DSA:3.10.105.10 313 514 1.7E-48 T 22-04-2016 TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 456 1.6E-83 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 SUPERFAMILY SSF53850 40 541 1.81E-116 T 22-04-2016 TMO_RS07130 2524a709a37042caa5bd26493e9fcb19 544 PIRSF PIRSF002741 8 543 1.2E-85 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 PANTHER PTHR39338:SF1 6 388 4.2E-94 T 22-04-2016 TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 Gene3D G3DSA:3.40.50.410 220 339 7.9E-10 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 SMART SM00327 217 384 4.3E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 Pfam PF05762 VWA domain containing CoxE-like protein 162 381 1.6E-70 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 PIRSF PIRSF010256 3 388 5.1E-117 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 SUPERFAMILY SSF53300 219 350 9.85E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS05905 b7ff229e0c0087bfc04cf7012f1dcea6 388 PANTHER PTHR39338 6 388 4.2E-94 T 22-04-2016 TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 11 201 46.533 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 13 197 3.7E-52 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 SUPERFAMILY SSF52972 6 199 4.97E-67 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 PANTHER PTHR11067:SF9 6 197 3.6E-69 T 22-04-2016 TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 Gene3D G3DSA:3.90.950.10 6 198 1.7E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 PANTHER PTHR11067 6 197 3.6E-69 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 TMO_RS17475 cb0647d1b96fd2b256aa11a5406cc70c 203 Pfam PF01725 Ham1 family 13 196 4.7E-50 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Pfam PF03129 Anticodon binding domain 325 412 5.2E-14 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Gene3D G3DSA:3.30.930.10 3 184 4.5E-84 T 22-04-2016 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Gene3D G3DSA:3.30.930.10 220 316 4.5E-84 T 22-04-2016 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 PANTHER PTHR11476:SF9 3 413 2.9E-186 T 22-04-2016 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 SUPERFAMILY SSF52954 324 411 8.34E-21 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01925 52360114c8ef887f16272978de2e9440 414 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 402 9.4E-137 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Pfam PF13393 Histidyl-tRNA synthetase 9 311 7.9E-42 T 22-04-2016 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 SUPERFAMILY SSF55681 4 315 6.32E-92 T 22-04-2016 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 412 31.062 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 Gene3D G3DSA:3.40.50.800 324 411 7.8E-26 T 22-04-2016 IPR004154 Anticodon-binding TMO_RS01925 52360114c8ef887f16272978de2e9440 414 PANTHER PTHR11476 3 413 2.9E-186 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 TMO_RS01925 52360114c8ef887f16272978de2e9440 414 PIRSF PIRSF001549 1 413 3.2E-110 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 SUPERFAMILY SSF48452 875 932 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 SUPERFAMILY SSF48452 725 752 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 SUPERFAMILY SSF48452 504 573 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 Gene3D G3DSA:1.25.40.10 882 940 2.8E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 Gene3D G3DSA:1.25.40.10 501 642 2.8E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05575 6f9b6ec670ed8f736c776b7fb47fff07 1031 Gene3D G3DSA:1.25.40.10 719 759 2.8E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS29890 401eaf1d80d949a438d7899ffb9f4d3b 151 PANTHER PTHR33362 2 148 9.5E-30 T 22-04-2016 TMO_RS29890 401eaf1d80d949a438d7899ffb9f4d3b 151 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 137 4.0E-25 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS29890 401eaf1d80d949a438d7899ffb9f4d3b 151 PANTHER PTHR33362:SF5 2 148 9.5E-30 T 22-04-2016 TMO_RS01405 0e7fa8eaca2a31eb31f821ea03fc2b87 320 PANTHER PTHR10996 34 316 6.8E-74 T 22-04-2016 TMO_RS01405 0e7fa8eaca2a31eb31f821ea03fc2b87 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 285 1.3E-40 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS01405 0e7fa8eaca2a31eb31f821ea03fc2b87 320 SUPERFAMILY SSF51735 102 285 8.42E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01405 0e7fa8eaca2a31eb31f821ea03fc2b87 320 Gene3D G3DSA:3.40.50.720 101 285 1.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS01405 0e7fa8eaca2a31eb31f821ea03fc2b87 320 PANTHER PTHR10996:SF114 34 316 6.8E-74 T 22-04-2016 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 Gene3D G3DSA:3.40.50.150 132 412 3.0E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 SUPERFAMILY SSF53335 144 410 2.13E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 PIRSF PIRSF003085 29 416 9.6E-119 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 PANTHER PTHR10108:SF795 72 329 1.0E-88 T 22-04-2016 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 PANTHER PTHR10108:SF795 346 410 1.0E-88 T 22-04-2016 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 PANTHER PTHR10108 72 329 1.0E-88 T 22-04-2016 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 PANTHER PTHR10108 346 410 1.0E-88 T 22-04-2016 TMO_RS13410 c5058a6a1a6b190ec1f35304ed7d003d 416 Pfam PF02353 Mycolic acid cyclopropane synthetase 136 410 1.5E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS14850 4b80b8e728c5997fba5dcda686a55507 370 SUPERFAMILY SSF48371 41 245 5.51E-38 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 TMO_RS14850 4b80b8e728c5997fba5dcda686a55507 370 PANTHER PTHR39167 9 368 3.3E-83 T 22-04-2016 TMO_RS00995 47c214d6ce121bc0305ffea74811bcbb 388 Pfam PF00534 Glycosyl transferases group 1 195 352 3.7E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS00995 47c214d6ce121bc0305ffea74811bcbb 388 PANTHER PTHR12526 9 384 5.8E-60 T 22-04-2016 TMO_RS00995 47c214d6ce121bc0305ffea74811bcbb 388 SUPERFAMILY SSF53756 14 384 1.66E-80 T 22-04-2016 TMO_RS00995 47c214d6ce121bc0305ffea74811bcbb 388 Gene3D G3DSA:3.40.50.2000 159 357 1.6E-26 T 22-04-2016 TMO_RS00995 47c214d6ce121bc0305ffea74811bcbb 388 Pfam PF13439 Glycosyltransferase Family 4 22 177 1.7E-30 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 PANTHER PTHR11647 1 431 1.2E-133 T 22-04-2016 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 Gene3D G3DSA:3.20.20.140 70 373 2.5E-92 T 22-04-2016 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 427 8.2E-94 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 ProSitePatterns PS00483 Dihydroorotase signature 2. 305 316 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 Gene3D G3DSA:2.30.40.10 374 433 1.7E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 Pfam PF01979 Amidohydrolase family 55 423 7.8E-26 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 SUPERFAMILY SSF51338 5 57 1.57E-32 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 SUPERFAMILY SSF51338 369 433 1.57E-32 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 PANTHER PTHR11647:SF1 1 431 1.2E-133 T 22-04-2016 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 Gene3D G3DSA:2.30.40.10 6 69 1.4E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS02705 b35f007c781e1e122cb4b68a3e361a46 451 SUPERFAMILY SSF51556 58 370 1.17E-93 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 SUPERFAMILY SSF81271 282 362 1.68E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:1.10.150.300 132 201 2.7E-27 T 22-04-2016 IPR023192 TGS-like domain TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 44.39 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.9E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PIRSF PIRSF006641 1 366 2.8E-155 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.9E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.9E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.9E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:3.10.20.30 269 366 2.3E-47 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 PANTHER PTHR23305 1 366 8.6E-203 T 22-04-2016 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Pfam PF01926 50S ribosome-binding GTPase 5 117 2.7E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 SUPERFAMILY SSF52540 3 304 1.47E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 3.8E-151 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:3.40.50.300 4 131 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01575 8c0136407f6d0936102d74b13fd00e49 366 Gene3D G3DSA:3.40.50.300 202 268 1.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05880 1c194995c45572650f0deef7fe9123f1 267 Pfam PF04321 RmlD substrate binding domain 65 164 6.2E-7 T 22-04-2016 IPR029903 RmlD-like substrate binding domain TMO_RS05880 1c194995c45572650f0deef7fe9123f1 267 SUPERFAMILY SSF51735 1 254 7.91E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05880 1c194995c45572650f0deef7fe9123f1 267 Gene3D G3DSA:3.40.50.720 1 220 4.4E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS29490 ac78ac166c4c4e673d27942d2fed6b0c 67 SUPERFAMILY SSF89796 8 59 5.62E-21 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS29490 ac78ac166c4c4e673d27942d2fed6b0c 67 Gene3D G3DSA:3.40.50.10540 8 60 1.0E-20 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS29490 ac78ac166c4c4e673d27942d2fed6b0c 67 Pfam PF02515 CoA-transferase family III 10 57 1.1E-17 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS17605 507ca6e30e7b5d34b59d573cf2203e85 255 Pfam PF06057 Bacterial virulence protein (VirJ) 55 241 1.9E-54 T 22-04-2016 IPR010333 Bacterial virulence TMO_RS17605 507ca6e30e7b5d34b59d573cf2203e85 255 SUPERFAMILY SSF53474 48 241 2.12E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17605 507ca6e30e7b5d34b59d573cf2203e85 255 Gene3D G3DSA:3.40.50.1820 49 238 8.7E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 SUPERFAMILY SSF143865 196 279 6.54E-34 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 SUPERFAMILY SSF143865 2 167 6.54E-34 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 Gene3D G3DSA:1.20.58.340 265 341 2.1E-28 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 Pfam PF01544 CorA-like Mg2+ transporter protein 23 166 6.7E-18 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 Pfam PF01544 CorA-like Mg2+ transporter protein 212 337 6.4E-30 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 PANTHER PTHR21535:SF37 20 341 7.6E-106 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 Gene3D G3DSA:3.30.460.20 22 111 3.4E-5 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 SUPERFAMILY SSF144083 276 338 3.92E-21 T 22-04-2016 TMO_RS10420 167b42d477e3171d4f90cf8026571933 341 PANTHER PTHR21535 20 341 7.6E-106 T 22-04-2016 TMO_RS02520 ac4012d713aa92b37f3ac7182b2da280 182 Gene3D G3DSA:3.90.1340.10 4 67 1.9E-28 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS02520 ac4012d713aa92b37f3ac7182b2da280 182 SUPERFAMILY SSF88874 4 174 9.81E-47 T 22-04-2016 TMO_RS02520 ac4012d713aa92b37f3ac7182b2da280 182 Pfam PF07484 Phage Tail Collar Domain 6 62 1.9E-25 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS02520 ac4012d713aa92b37f3ac7182b2da280 182 PANTHER PTHR34720 4 174 1.5E-45 T 22-04-2016 TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 SMART SM00382 40 212 2.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 SUPERFAMILY SSF52540 8 236 6.14E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 Gene3D G3DSA:3.40.50.300 14 225 1.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 Pfam PF00005 ABC transporter 31 163 1.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 PANTHER PTHR24220:SF466 17 249 3.3E-88 T 22-04-2016 TMO_RS06975 3ada05fbc209e012985a5c21128dd654 282 PANTHER PTHR24220 17 249 3.3E-88 T 22-04-2016 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07196 Flagellin hook IN motif 170 229 6.3E-8 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07196 Flagellin hook IN motif 306 360 1.6E-6 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 PANTHER PTHR30288 18 543 1.2E-54 T 22-04-2016 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 PANTHER PTHR30288 617 704 1.2E-54 T 22-04-2016 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 PANTHER PTHR30288:SF0 18 543 1.2E-54 T 22-04-2016 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 PANTHER PTHR30288:SF0 617 704 1.2E-54 T 22-04-2016 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 28 141 9.0E-18 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 TMO_RS05415 ba96be262da43468a2c6db9bfed82b8e 707 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 375 689 1.2E-42 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 PANTHER PTHR20858 1 186 7.9E-41 T 22-04-2016 TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 PIRSF PIRSF003170 1 223 5.9E-68 T 22-04-2016 IPR026285 TenA_E protein TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 Pfam PF03070 TENA/THI-4/PQQC family 17 221 3.5E-20 T 22-04-2016 IPR004305 Thiaminase-2/PQQC TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 PANTHER PTHR20858:SF18 1 186 7.9E-41 T 22-04-2016 TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 Gene3D G3DSA:1.20.910.10 5 221 3.3E-51 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS04220 d63d7b7f43093df156e9aa85fa5fb56a 223 SUPERFAMILY SSF48613 9 220 3.5E-52 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 PANTHER PTHR21631:SF4 1 274 3.1E-96 T 22-04-2016 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 SUPERFAMILY SSF51621 2 289 2.65E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 Gene3D G3DSA:3.20.20.60 2 285 1.7E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 249 9.3E-52 T 22-04-2016 TMO_RS02375 fc790000af2318526f2a7df39b51140b 305 PANTHER PTHR21631 1 274 3.1E-96 T 22-04-2016 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 Pfam PF00892 EamA-like transporter family 170 306 5.5E-24 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 Pfam PF00892 EamA-like transporter family 23 155 1.7E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 SUPERFAMILY SSF103481 209 310 6.67E-13 T 22-04-2016 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 SUPERFAMILY SSF103481 56 158 1.96E-12 T 22-04-2016 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 PANTHER PTHR12715 3 313 1.2E-73 T 22-04-2016 TMO_RS13390 7cff4d3155b7628c4bdaa7f30e5243ec 314 PANTHER PTHR12715:SF12 3 313 1.2E-73 T 22-04-2016 TMO_RS00095 535de631f47a598278c13a0e4d51e927 344 PANTHER PTHR30222:SF2 11 344 2.5E-131 T 22-04-2016 TMO_RS00095 535de631f47a598278c13a0e4d51e927 344 Pfam PF13416 Bacterial extracellular solute-binding protein 64 308 2.8E-36 T 22-04-2016 TMO_RS00095 535de631f47a598278c13a0e4d51e927 344 Gene3D G3DSA:3.40.190.10 125 281 6.1E-32 T 22-04-2016 TMO_RS00095 535de631f47a598278c13a0e4d51e927 344 PANTHER PTHR30222 11 344 2.5E-131 T 22-04-2016 TMO_RS00095 535de631f47a598278c13a0e4d51e927 344 SUPERFAMILY SSF53850 23 342 9.93E-64 T 22-04-2016 TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 SMART SM00530 9 64 8.1E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 Pfam PF13560 Helix-turn-helix domain 7 64 7.2E-12 T 22-04-2016 TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 Gene3D G3DSA:1.10.260.40 6 61 2.1E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 SUPERFAMILY SSF47413 4 64 3.49E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 Pfam PF06114 Domain of unknown function (DUF955) 248 346 1.1E-11 T 22-04-2016 IPR010359 HTH domain, IrrE-type TMO_RS04675 e6310b64c5076da7821442a8fc949fba 488 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 348 486 1.2E-34 T 22-04-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 SMART SM00382 35 220 9.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 SUPERFAMILY SSF52540 11 251 1.66E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 Pfam PF00005 ABC transporter 27 170 3.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 PANTHER PTHR24220 12 249 4.8E-101 T 22-04-2016 TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 Gene3D G3DSA:3.40.50.300 7 245 5.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 SUPERFAMILY SSF50331 258 352 1.73E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal TMO_RS07720 7ee144214d8a7fb16ac9e3d347d95e88 353 PANTHER PTHR24220:SF282 12 249 4.8E-101 T 22-04-2016 TMO_RS01785 71c7fa324445974b5713a41105255181 327 PANTHER PTHR32308:SF2 211 327 4.7E-101 T 22-04-2016 TMO_RS01785 71c7fa324445974b5713a41105255181 327 PANTHER PTHR32308:SF2 12 189 4.7E-101 T 22-04-2016 TMO_RS01785 71c7fa324445974b5713a41105255181 327 SUPERFAMILY SSF51621 11 270 6.91E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS01785 71c7fa324445974b5713a41105255181 327 PANTHER PTHR32308 211 327 4.7E-101 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like TMO_RS01785 71c7fa324445974b5713a41105255181 327 PANTHER PTHR32308 12 189 4.7E-101 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like TMO_RS01785 71c7fa324445974b5713a41105255181 327 PIRSF PIRSF015582 1 327 8.4E-87 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like TMO_RS01785 71c7fa324445974b5713a41105255181 327 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 261 5.9E-41 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 TMO_RS01785 71c7fa324445974b5713a41105255181 327 Gene3D G3DSA:3.20.20.60 10 270 2.5E-76 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS03685 2dad1b273dac25315c7d473880b068c9 196 PANTHER PTHR34295 24 196 8.3E-40 T 22-04-2016 TMO_RS03685 2dad1b273dac25315c7d473880b068c9 196 PANTHER PTHR34295:SF1 24 196 8.3E-40 T 22-04-2016 TMO_RS03685 2dad1b273dac25315c7d473880b068c9 196 PIRSF PIRSF016661 15 190 3.0E-39 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_RS03685 2dad1b273dac25315c7d473880b068c9 196 Pfam PF02632 BioY family 43 182 7.2E-36 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_RS14495 b37d0f239a1461323e3c3c8e435638fc 286 PANTHER PTHR30433:SF4 1 284 3.5E-97 T 22-04-2016 IPR022522 Flagellar motor stator, MotA TMO_RS14495 b37d0f239a1461323e3c3c8e435638fc 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 9.3E-99 T 22-04-2016 IPR022522 Flagellar motor stator, MotA TMO_RS14495 b37d0f239a1461323e3c3c8e435638fc 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site TMO_RS14495 b37d0f239a1461323e3c3c8e435638fc 286 PANTHER PTHR30433 1 284 3.5E-97 T 22-04-2016 TMO_RS14495 b37d0f239a1461323e3c3c8e435638fc 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 131 218 4.7E-10 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS14595 c1d6087f4ca41b063949ff908d14d732 199 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 35 193 2.0E-26 T 22-04-2016 IPR005642 Lysine exporter LysO TMO_RS14595 c1d6087f4ca41b063949ff908d14d732 199 Pfam PF03956 Membrane protein of unknown function (DUF340) 9 197 1.8E-52 T 22-04-2016 IPR005642 Lysine exporter LysO TMO_RS14595 c1d6087f4ca41b063949ff908d14d732 199 PANTHER PTHR35804:SF1 2 199 1.5E-43 T 22-04-2016 TMO_RS14595 c1d6087f4ca41b063949ff908d14d732 199 PANTHER PTHR35804 2 199 1.5E-43 T 22-04-2016 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 PANTHER PTHR26402:SF316 1 218 3.5E-83 T 22-04-2016 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 SMART SM00448 1 112 1.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 Gene3D G3DSA:1.10.10.10 123 218 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 Gene3D G3DSA:3.40.50.2300 1 121 2.6E-33 T 22-04-2016 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 1.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 SMART SM00862 145 216 1.2E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 SUPERFAMILY SSF52172 1 118 5.55E-35 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 Pfam PF00072 Response regulator receiver domain 3 111 7.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 PANTHER PTHR26402 1 218 3.5E-83 T 22-04-2016 TMO_RS02405 ff4d518381af409757163e6f730d10d7 221 SUPERFAMILY SSF46894 120 217 8.22E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 164 33.116 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PANTHER PTHR21342 1 168 2.1E-64 T 22-04-2016 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 160 2.0E-56 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 Gene3D G3DSA:3.40.50.620 4 163 3.1E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS07895 c483ee0ea3543835ab08899245156280 174 SUPERFAMILY SSF52374 5 159 1.53E-37 T 22-04-2016 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PANTHER PTHR21342:SF1 1 168 2.1E-64 T 22-04-2016 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.9E-35 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 1.9E-35 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.9E-35 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.9E-35 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 Pfam PF01467 Cytidylyltransferase-like 6 137 1.2E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS07895 c483ee0ea3543835ab08899245156280 174 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 3.7E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 TMO_RS03715 9754ae1f59f9a22d1bf7edd1fea33ff5 117 Gene3D G3DSA:3.30.70.900 2 116 2.9E-52 T 22-04-2016 TMO_RS03715 9754ae1f59f9a22d1bf7edd1fea33ff5 117 SUPERFAMILY SSF54909 2 116 3.22E-50 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS03715 9754ae1f59f9a22d1bf7edd1fea33ff5 117 Pfam PF07237 Protein of unknown function (DUF1428) 3 103 8.9E-45 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 TMO_RS03715 9754ae1f59f9a22d1bf7edd1fea33ff5 117 PIRSF PIRSF007028 1 117 1.9E-48 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 TMO_RS10985 0b7c72ce94fd5e38c38527a6a3e292bb 196 Gene3D G3DSA:1.10.357.10 1 183 1.6E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS10985 0b7c72ce94fd5e38c38527a6a3e292bb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 8.7E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS10985 0b7c72ce94fd5e38c38527a6a3e292bb 196 SUPERFAMILY SSF48498 80 183 8.4E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS10985 0b7c72ce94fd5e38c38527a6a3e292bb 196 SUPERFAMILY SSF46689 10 73 2.41E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10985 0b7c72ce94fd5e38c38527a6a3e292bb 196 PANTHER PTHR30055 8 184 1.4E-15 T 22-04-2016 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 482 503 1.4E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 77 98 1.4E-5 T 22-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 473 489 1.1 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 359 372 0.5 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 455 471 0.044 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 509 525 0.032 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 491 507 0.17 T 22-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF51120 326 403 2.09E-6 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF51120 446 584 1.31E-25 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 491 499 4.4E-9 T 22-04-2016 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 479 490 4.4E-9 T 22-04-2016 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 509 517 4.4E-9 T 22-04-2016 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 PRINTS PR00313 NodO calcium binding signature 518 527 4.4E-9 T 22-04-2016 TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 469 487 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 478 496 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 505 523 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 SUPERFAMILY SSF53474 92 212 2.97E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:2.150.10.10 446 599 1.5E-37 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS06780 ecc674f17c0760c20508ddd32ffb1b3b 601 Gene3D G3DSA:2.150.10.10 329 386 1.5E-37 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 SUPERFAMILY SSF46689 3 79 4.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 PANTHER PTHR30055 1 211 1.6E-29 T 22-04-2016 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 2.1E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.1E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 Gene3D G3DSA:1.10.357.10 3 171 1.1E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 8.1E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 PANTHER PTHR30055:SF30 1 211 1.6E-29 T 22-04-2016 TMO_RS01300 906db06f7a2482f60787f82850a35f36 223 Pfam PF13972 Bacterial transcriptional repressor 65 205 5.0E-39 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR TMO_RS05400 0040826545cb7d6b9d19d72ed79a4cc1 155 PANTHER PTHR30212 18 104 7.2E-12 T 22-04-2016 TMO_RS05400 0040826545cb7d6b9d19d72ed79a4cc1 155 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 7 108 1.5E-12 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 TMO_RS05400 0040826545cb7d6b9d19d72ed79a4cc1 155 PANTHER PTHR30212:SF3 18 104 7.2E-12 T 22-04-2016 TMO_RS05400 0040826545cb7d6b9d19d72ed79a4cc1 155 SUPERFAMILY SSF50475 1 119 1.12E-11 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS05400 0040826545cb7d6b9d19d72ed79a4cc1 155 Gene3D G3DSA:2.30.110.10 1 117 9.2E-15 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 TMO_RS29250 964f4c7aaeee9a9acdaf794821bc9dd1 128 Pfam PF04977 Septum formation initiator 13 87 1.4E-14 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 PANTHER PTHR30572:SF3 28 386 2.3E-116 T 22-04-2016 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 256 4.0E-19 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 Gene3D G3DSA:2.40.50.100 51 84 2.2E-18 T 22-04-2016 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 Gene3D G3DSA:2.40.50.100 173 205 2.2E-18 T 22-04-2016 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 262 1.2E-37 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 SUPERFAMILY SSF111369 42 250 7.45E-23 T 22-04-2016 TMO_RS11865 5d67bb5a8cc46df397ea89f8998244e5 394 PANTHER PTHR30572 28 386 2.3E-116 T 22-04-2016 TMO_RS06270 ecd7baab1feb206df7463cc5f4224a32 235 Pfam PF02108 Flagellar assembly protein FliH 88 195 5.7E-6 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 SUPERFAMILY SSF51735 9 247 1.89E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.2E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 Gene3D G3DSA:3.40.50.720 9 247 5.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 PANTHER PTHR24317 116 247 1.7E-18 T 22-04-2016 TMO_RS00185 c56bf05d47ff343dd79322a423e46476 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 247 3.3E-36 T 22-04-2016 TMO_RS15580 1dc3a56c464f636fc85cb3cbe5b9b595 286 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 274 4.3E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS15580 1dc3a56c464f636fc85cb3cbe5b9b595 286 PANTHER PTHR11795 1 284 2.2E-89 T 22-04-2016 TMO_RS01865 a0413090282f38b0f359f51dc675d067 382 Pfam PF14907 Uncharacterised nucleotidyltransferase 39 284 6.9E-37 T 22-04-2016 TMO_RS01175 021f3abac7afb82963929e4886dabf55 189 PANTHER PTHR13947 59 163 1.4E-13 T 22-04-2016 TMO_RS01175 021f3abac7afb82963929e4886dabf55 189 SUPERFAMILY SSF55729 19 163 4.29E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS01175 021f3abac7afb82963929e4886dabf55 189 Pfam PF00583 Acetyltransferase (GNAT) family 97 162 7.6E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS01175 021f3abac7afb82963929e4886dabf55 189 Gene3D G3DSA:3.40.630.30 19 164 6.8E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17040 075695ec641b455a01f1fc62f9139147 229 PANTHER PTHR32479:SF11 8 229 1.6E-18 T 22-04-2016 TMO_RS17040 075695ec641b455a01f1fc62f9139147 229 PANTHER PTHR32479 8 229 1.6E-18 T 22-04-2016 TMO_RS17040 075695ec641b455a01f1fc62f9139147 229 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 129 226 5.4E-25 T 22-04-2016 IPR003741 LUD domain TMO_RS17040 075695ec641b455a01f1fc62f9139147 229 Gene3D G3DSA:3.40.50.10420 53 227 2.6E-42 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain TMO_RS17040 075695ec641b455a01f1fc62f9139147 229 SUPERFAMILY SSF100950 52 227 5.86E-38 T 22-04-2016 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 SUPERFAMILY SSF51905 10 316 3.35E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 Gene3D G3DSA:3.50.50.60 118 313 1.3E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 2.2E-10 T 22-04-2016 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 2.2E-10 T 22-04-2016 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 2.2E-10 T 22-04-2016 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 299 317 4.7E-8 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 17 39 4.7E-8 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 124 4.7E-8 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 156 180 4.7E-8 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 Gene3D G3DSA:3.50.50.60 10 117 4.2E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12635 919182727d5ae2dbc06ec43ea4e78927 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 317 1.4E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS17345 ff849d748000d063b3e404d364011f15 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 252 2.4E-29 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS17345 ff849d748000d063b3e404d364011f15 253 PANTHER PTHR11941 6 250 5.0E-37 T 22-04-2016 TMO_RS17345 ff849d748000d063b3e404d364011f15 253 Gene3D G3DSA:3.90.226.10 3 250 4.9E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS17345 ff849d748000d063b3e404d364011f15 253 SUPERFAMILY SSF52096 2 252 8.4E-51 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS06045 f19353236f6f1aaf9695683d9c4b9f2d 106 PANTHER PTHR30561:SF0 1 106 2.3E-49 T 22-04-2016 TMO_RS06045 f19353236f6f1aaf9695683d9c4b9f2d 106 SUPERFAMILY SSF103481 5 101 2.88E-19 T 22-04-2016 TMO_RS06045 f19353236f6f1aaf9695683d9c4b9f2d 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.3E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 TMO_RS06045 f19353236f6f1aaf9695683d9c4b9f2d 106 PANTHER PTHR30561 1 106 2.3E-49 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 Gene3D G3DSA:3.90.1310.10 125 241 8.1E-29 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 SUPERFAMILY SSF56601 512 626 1.29E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 SUPERFAMILY SSF56601 243 480 1.29E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 13 626 1.5E-212 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 622 4.9E-63 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 SUPERFAMILY SSF56519 50 242 6.93E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 PANTHER PTHR30627:SF2 508 643 1.3E-187 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 PANTHER PTHR30627:SF2 1 490 1.3E-187 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 PANTHER PTHR30627 508 643 1.3E-187 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 PANTHER PTHR30627 1 490 1.3E-187 T 22-04-2016 TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 Gene3D G3DSA:3.40.710.10 242 627 2.3E-101 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS03860 75c5b5248b9202c3bf44bc1099d08087 668 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 228 4.6E-37 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 SUPERFAMILY SSF111337 1 344 2.49E-123 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 Gene3D G3DSA:2.40.10.240 62 134 1.6E-17 T 22-04-2016 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 PANTHER PTHR30307:SF0 2 351 6.6E-144 T 22-04-2016 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 Gene3D G3DSA:3.40.1780.10 181 344 7.6E-90 T 22-04-2016 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 Gene3D G3DSA:3.40.1780.10 1 60 7.6E-90 T 22-04-2016 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 Pfam PF02547 Queuosine biosynthesis protein 4 344 1.1E-124 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 43.878 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.8E-109 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 TMO_RS07900 fe3574242bb67a4afa89a01b728f4195 353 PANTHER PTHR30307 2 351 6.6E-144 T 22-04-2016 TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 SMART SM00271 142 200 6.3E-14 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 180 200 1.4E-7 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 145 163 1.4E-7 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 PRINTS PR00625 DnaJ domain signature 163 178 1.4E-7 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 SUPERFAMILY SSF46565 140 197 4.19E-15 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 Pfam PF00226 DnaJ domain 145 197 6.4E-12 T 22-04-2016 IPR001623 DnaJ domain TMO_RS01725 d8c50e8578da772ce41e2d159bfcf34a 203 Gene3D G3DSA:1.10.287.110 140 198 3.0E-14 T 22-04-2016 IPR001623 DnaJ domain TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 373 553 2.8E-33 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 Pfam PF17200 Single Cache domain 2 39 185 1.4E-25 T 22-04-2016 IPR033480 Single Cache domain 2 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 Pfam PF00672 HAMP domain 192 259 6.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 Gene3D G3DSA:3.30.450.20 23 181 5.3E-33 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 PANTHER PTHR32089:SF56 278 557 1.2E-117 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 PANTHER PTHR32089:SF56 144 246 1.2E-117 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 SMART SM00283 300 554 2.6E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 PANTHER PTHR32089 278 557 1.2E-117 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 PANTHER PTHR32089 144 246 1.2E-117 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 Gene3D G3DSA:1.10.287.950 316 525 2.3E-43 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 SUPERFAMILY SSF58104 306 553 2.09E-58 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 SUPERFAMILY SSF58104 240 266 2.09E-58 T 22-04-2016 TMO_RS10755 e5a9abebeaaba8664237b5c4d576051d 560 SMART SM01049 33 128 1.6E-24 T 22-04-2016 IPR033480 Single Cache domain 2 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 PANTHER PTHR13528 1 91 5.9E-29 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 20.904 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 Gene3D G3DSA:2.30.170.40 2 75 9.6E-29 T 22-04-2016 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 SUPERFAMILY SSF143800 1 81 4.32E-26 T 22-04-2016 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 Pfam PF00830 Ribosomal L28 family 3 61 2.3E-22 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 TMO_RS01635 52cad26c1e8c2e1f3698b48dd21499f2 103 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.4E-22 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS01555 9de85bfb0d3596119070ede3de523aa0 287 SUPERFAMILY SSF54593 173 286 8.66E-9 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS01555 9de85bfb0d3596119070ede3de523aa0 287 SUPERFAMILY SSF54593 4 197 8.17E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS01555 9de85bfb0d3596119070ede3de523aa0 287 Pfam PF13468 Glyoxalase-like domain 8 191 3.6E-40 T 22-04-2016 IPR025870 Glyoxalase-like domain TMO_RS01555 9de85bfb0d3596119070ede3de523aa0 287 Gene3D G3DSA:3.10.180.10 171 263 6.4E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS01555 9de85bfb0d3596119070ede3de523aa0 287 Gene3D G3DSA:3.10.180.10 5 127 1.0E-9 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS12790 b47642f43d5bfe47a425fd6d38beba1e 385 Gene3D G3DSA:3.40.50.2000 192 358 7.9E-25 T 22-04-2016 TMO_RS12790 b47642f43d5bfe47a425fd6d38beba1e 385 Pfam PF13439 Glycosyltransferase Family 4 21 188 5.9E-24 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain TMO_RS12790 b47642f43d5bfe47a425fd6d38beba1e 385 PANTHER PTHR12526 7 382 2.0E-50 T 22-04-2016 TMO_RS12790 b47642f43d5bfe47a425fd6d38beba1e 385 Pfam PF00534 Glycosyl transferases group 1 199 358 8.2E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS12790 b47642f43d5bfe47a425fd6d38beba1e 385 SUPERFAMILY SSF53756 11 379 4.45E-69 T 22-04-2016 TMO_RS13555 2addc502c50c9009d4d0b36da6eb5bf7 133 SUPERFAMILY SSF54593 3 131 2.69E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS13555 2addc502c50c9009d4d0b36da6eb5bf7 133 PANTHER PTHR34109 8 131 9.8E-15 T 22-04-2016 TMO_RS13555 2addc502c50c9009d4d0b36da6eb5bf7 133 Gene3D G3DSA:3.10.180.10 1 128 3.0E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS13555 2addc502c50c9009d4d0b36da6eb5bf7 133 Pfam PF12681 Glyoxalase-like domain 8 130 3.7E-12 T 22-04-2016 IPR025870 Glyoxalase-like domain TMO_RS11520 51031da818f49a395b424edfe261abd5 331 Gene3D G3DSA:1.10.3470.10 5 327 2.1E-79 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS11520 51031da818f49a395b424edfe261abd5 331 PANTHER PTHR30472 5 331 1.3E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS11520 51031da818f49a395b424edfe261abd5 331 Pfam PF01032 FecCD transport family 13 324 1.7E-73 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS11520 51031da818f49a395b424edfe261abd5 331 SUPERFAMILY SSF81345 5 325 8.5E-64 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS08205 e19abeaef298fe29a8ba117888da8695 199 Pfam PF00588 SpoU rRNA Methylase family 15 155 3.6E-12 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 TMO_RS08205 e19abeaef298fe29a8ba117888da8695 199 SUPERFAMILY SSF75217 14 166 9.59E-20 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS08205 e19abeaef298fe29a8ba117888da8695 199 Gene3D G3DSA:3.40.1280.10 17 173 1.9E-16 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 18 391 8.5E-92 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 PANTHER PTHR23502 18 406 5.4E-103 T 22-04-2016 TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 Pfam PF07690 Major Facilitator Superfamily 24 366 1.4E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 Gene3D G3DSA:1.20.1250.20 216 394 4.5E-8 T 22-04-2016 TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 Gene3D G3DSA:1.20.1250.20 19 196 5.3E-26 T 22-04-2016 TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 SUPERFAMILY SSF103473 16 399 1.06E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS00045 2e1fd704ca0c879b84eb65b3a381252e 406 PANTHER PTHR23502:SF19 18 406 5.4E-103 T 22-04-2016 TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 Gene3D G3DSA:3.40.50.2300 282 401 1.6E-34 T 22-04-2016 TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 PANTHER PTHR30483:SF8 284 558 1.7E-100 T 22-04-2016 TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 PANTHER PTHR30483 284 558 1.7E-100 T 22-04-2016 TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 SUPERFAMILY SSF53822 284 554 2.02E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 Pfam PF13433 Periplasmic binding protein domain 283 556 2.7E-111 T 22-04-2016 TMO_RS26310 6c9e2137646bff1ed696147d74956d1b 558 Gene3D G3DSA:3.40.50.2300 402 557 7.6E-52 T 22-04-2016 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 PANTHER PTHR10277 12 309 1.1E-89 T 22-04-2016 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 SUPERFAMILY SSF51569 18 306 2.56E-78 T 22-04-2016 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 30 46 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 PANTHER PTHR10277:SF9 12 309 1.1E-89 T 22-04-2016 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 Gene3D G3DSA:3.20.20.70 12 317 1.7E-90 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 Pfam PF00682 HMGL-like 23 280 3.4E-71 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS05125 e8fe30d0330cbb88a1f526c13c43922c 445 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 216 229 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 SUPERFAMILY SSF56784 11 231 6.84E-47 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 53 66 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 39 52 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 162 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 1.0E-33 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 14 195 1.2E-31 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 92 202 1.6E-13 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 Gene3D G3DSA:1.10.150.240 42 96 2.2E-24 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 Gene3D G3DSA:3.40.50.1000 97 229 4.6E-36 T 22-04-2016 IPR023214 HAD-like domain TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 11 206 1.6E-62 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 TMO_RS07955 798c17e20bca747d124f2d660821ef41 233 PANTHER PTHR12725 4 233 1.6E-27 T 22-04-2016 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 Gene3D G3DSA:3.40.640.10 68 344 1.3E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 PANTHER PTHR11986 1 455 7.6E-245 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 Pfam PF00202 Aminotransferase class-III 25 447 9.1E-99 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 PIRSF PIRSF000521 3 450 2.3E-35 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 Gene3D G3DSA:3.90.1150.10 9 66 5.8E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 Gene3D G3DSA:3.90.1150.10 347 450 5.8E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 SUPERFAMILY SSF53383 12 449 1.1E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS01415 ae869976ce922ef428b510692936fe4f 455 PANTHER PTHR11986:SF81 1 455 7.6E-245 T 22-04-2016 TMO_RS05735 7c31ff9d9d11be974c3bc77bea59a204 413 Gene3D G3DSA:1.20.1250.20 25 206 5.8E-29 T 22-04-2016 TMO_RS05735 7c31ff9d9d11be974c3bc77bea59a204 413 SUPERFAMILY SSF103473 15 408 9.29E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS05735 7c31ff9d9d11be974c3bc77bea59a204 413 Pfam PF07690 Major Facilitator Superfamily 29 371 1.4E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS05735 7c31ff9d9d11be974c3bc77bea59a204 413 Gene3D G3DSA:1.20.1250.20 230 402 2.4E-12 T 22-04-2016 TMO_RS05735 7c31ff9d9d11be974c3bc77bea59a204 413 PANTHER PTHR23501 24 410 9.8E-60 T 22-04-2016 TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 SUPERFAMILY SSF53597 8 201 3.65E-53 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 9 213 7.3E-47 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 Pfam PF01872 RibD C-terminal domain 11 187 7.3E-45 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 PANTHER PTHR11079 17 188 3.2E-13 T 22-04-2016 TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 Gene3D G3DSA:3.40.430.10 2 213 5.2E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain TMO_RS17305 0ea6793738f8094f79dafb6179f078a5 229 PANTHER PTHR11079:SF76 17 188 3.2E-13 T 22-04-2016 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 256 6.0E-51 T 22-04-2016 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 297 46.61 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 296 4.0E-124 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 PANTHER PTHR21631:SF4 9 288 2.9E-120 T 22-04-2016 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 PANTHER PTHR21631 9 288 2.9E-120 T 22-04-2016 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 Gene3D G3DSA:3.20.20.60 15 292 4.5E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS12145 4ed538c0b4fa519f88273aecdd192e18 305 SUPERFAMILY SSF51621 5 295 1.35E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS03985 80e047742c93ef8d5d2771f3318ce03a 488 PANTHER PTHR32057 6 488 1.6E-158 T 22-04-2016 TMO_RS03985 80e047742c93ef8d5d2771f3318ce03a 488 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 474 43.166 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 TMO_RS03985 80e047742c93ef8d5d2771f3318ce03a 488 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 5 457 1.9E-107 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 TMO_RS29560 44db1f95372c6c7d03db786306631364 337 Gene3D G3DSA:3.30.70.270 181 328 2.0E-31 T 22-04-2016 TMO_RS29560 44db1f95372c6c7d03db786306631364 337 SMART SM00267 168 337 1.0E-24 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29560 44db1f95372c6c7d03db786306631364 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 328 1.2E-27 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29560 44db1f95372c6c7d03db786306631364 337 SUPERFAMILY SSF55073 184 327 3.66E-27 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29560 44db1f95372c6c7d03db786306631364 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 328 1.6E-26 T 22-04-2016 IPR000160 GGDEF domain TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 PANTHER PTHR12124 1 289 1.2E-56 T 22-04-2016 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 SMART SM00341 206 286 2.0E-11 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 Hamap MF_01899 Ribonuclease D [rnd]. 1 364 43.357 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 Gene3D G3DSA:3.30.420.10 2 174 6.4E-19 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 Pfam PF01612 3'-5' exonuclease 1 168 3.5E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 SUPERFAMILY SSF47819 297 366 1.33E-13 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 Pfam PF00570 HRDC domain 210 277 9.9E-17 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 TIGRFAM TIGR01388 rnd: ribonuclease D 1 365 4.2E-124 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 SUPERFAMILY SSF47819 193 290 1.29E-20 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 Gene3D G3DSA:1.10.150.80 215 260 0.001 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 SMART SM00474 1 168 2.5E-35 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 TMO_RS09225 2efc23b7da2e95131a4553fb51c3acee 381 SUPERFAMILY SSF53098 1 201 2.06E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS14100 287a8c618b369c17a578ffe95c1ae402 160 Pfam PF08534 Redoxin 6 157 1.3E-36 T 22-04-2016 IPR013740 Redoxin GO:0016491 TMO_RS14100 287a8c618b369c17a578ffe95c1ae402 160 PANTHER PTHR10430 1 160 2.2E-82 T 22-04-2016 TMO_RS14100 287a8c618b369c17a578ffe95c1ae402 160 Gene3D G3DSA:3.40.30.10 1 160 7.6E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14100 287a8c618b369c17a578ffe95c1ae402 160 SUPERFAMILY SSF52833 1 159 3.76E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14100 287a8c618b369c17a578ffe95c1ae402 160 PANTHER PTHR10430:SF16 1 160 2.2E-82 T 22-04-2016 TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 SUPERFAMILY SSF52096 12 268 8.71E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 Gene3D G3DSA:1.10.12.10 212 268 6.1E-17 T 22-04-2016 IPR014748 Crontonase, C-terminal TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 268 5.3E-56 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 Gene3D G3DSA:3.90.226.10 9 209 4.8E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 PANTHER PTHR11941:SF28 1 266 8.4E-120 T 22-04-2016 TMO_RS09000 0cda2b33411371d463cbb8dfee9b1e13 269 PANTHER PTHR11941 1 266 8.4E-120 T 22-04-2016 TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 PANTHER PTHR24220:SF519 9 260 4.7E-135 T 22-04-2016 TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 SMART SM00382 32 242 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Gene3D G3DSA:3.40.50.300 4 254 1.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 1.0E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 PANTHER PTHR24220 9 260 4.7E-135 T 22-04-2016 TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 Pfam PF00005 ABC transporter 23 185 2.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS15435 9eb7ffd1bfaa17a677ec146b35a80ca2 265 SUPERFAMILY SSF52540 6 257 2.02E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08385 4d9736656220b2e47c79b856837ece0a 326 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 150 165 - T 22-04-2016 IPR019826 Carboxylesterase type B, active site TMO_RS08385 4d9736656220b2e47c79b856837ece0a 326 SUPERFAMILY SSF53474 24 323 1.8E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS08385 4d9736656220b2e47c79b856837ece0a 326 Pfam PF07859 alpha/beta hydrolase fold 85 297 5.4E-67 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 TMO_RS08385 4d9736656220b2e47c79b856837ece0a 326 PANTHER PTHR23024 55 323 1.1E-71 T 22-04-2016 TMO_RS08385 4d9736656220b2e47c79b856837ece0a 326 Gene3D G3DSA:3.40.50.1820 4 323 1.0E-86 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS19490 b5d2d0435186c15224587b96843eec2d 390 Pfam PF06213 Cobalamin biosynthesis protein CobT 1 209 1.6E-56 T 22-04-2016 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS19490 b5d2d0435186c15224587b96843eec2d 390 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 331 390 3.3E-24 T 22-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 PANTHER PTHR37937 302 668 6.4E-26 T 22-04-2016 TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 PANTHER PTHR37937:SF1 302 668 6.4E-26 T 22-04-2016 TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 292 642 6.4E-63 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 Gene3D G3DSA:3.40.50.300 510 686 6.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 Gene3D G3DSA:3.40.50.300 310 377 6.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16820 ca973b90584200d5d5ff355ebfb27e55 710 SUPERFAMILY SSF52540 292 683 7.96E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS07445 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 SUPERFAMILY SSF81452 15 210 9.55E-42 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 TMO_RS07445 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 PANTHER PTHR11403 11 211 1.4E-48 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 TMO_RS07445 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 PANTHER PTHR11403:SF6 11 211 1.4E-48 T 22-04-2016 TMO_RS07445 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 Pfam PF00510 Cytochrome c oxidase subunit III 23 209 4.8E-13 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 TMO_RS07445 8a4ebb8c8d033b27dc3d1a7db539ef9a 211 Gene3D G3DSA:1.20.120.80 18 210 5.2E-44 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 TMO_RS15350 0757c037d9523fe35423e8f59ee2be2c 226 Pfam PF05401 Nodulation protein S (NodS) 16 123 2.1E-12 T 22-04-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- TMO_RS15350 0757c037d9523fe35423e8f59ee2be2c 226 Gene3D G3DSA:3.40.50.150 25 153 1.3E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS15350 0757c037d9523fe35423e8f59ee2be2c 226 SUPERFAMILY SSF53335 14 161 2.5E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS15255 31f304147ad0136760a98e2c694dc507 545 Gene3D G3DSA:3.30.450.20 403 524 9.3E-12 T 22-04-2016 TMO_RS15255 31f304147ad0136760a98e2c694dc507 545 SUPERFAMILY SSF55785 397 520 3.32E-8 T 22-04-2016 IPR000014 PAS domain TMO_RS15255 31f304147ad0136760a98e2c694dc507 545 Pfam PF08447 PAS fold 463 524 6.3E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 TMO_RS02080 1e4fce7ae90d5130ee3a59c7052694a7 156 PIRSF PIRSF031796 2 153 1.7E-49 T 22-04-2016 IPR009394 DNA repair protein MmcB-like TMO_RS02080 1e4fce7ae90d5130ee3a59c7052694a7 156 Pfam PF06319 Protein of unknown function (DUF1052) 11 149 5.8E-51 T 22-04-2016 IPR009394 DNA repair protein MmcB-like TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 Gene3D G3DSA:2.40.170.20 159 675 5.6E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 4.3E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 Gene3D G3DSA:2.170.130.10 33 158 5.5E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 Pfam PF00593 TonB dependent receptor 432 673 1.1E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 SUPERFAMILY SSF56935 33 675 2.02E-105 T 22-04-2016 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 PANTHER PTHR32552 9 675 3.5E-68 T 22-04-2016 TMO_RS01325 495031ee781e217da1c9d96f374484b9 675 PANTHER PTHR32552:SF11 9 675 3.5E-68 T 22-04-2016 TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 SUPERFAMILY SSF51735 13 255 1.38E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.7E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PANTHER PTHR24322 164 196 6.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PANTHER PTHR24322 18 148 6.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 Pfam PF00106 short chain dehydrogenase 16 209 2.6E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 Gene3D G3DSA:3.40.50.720 4 255 1.2E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06935 6f9b1c90df08292b783c90327da51ac8 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06785 6ee61d1e090fdc48c49acd5bb1bb36fa 364 PANTHER PTHR30514:SF0 28 358 9.5E-41 T 22-04-2016 TMO_RS06785 6ee61d1e090fdc48c49acd5bb1bb36fa 364 Gene3D G3DSA:3.40.367.20 131 335 3.3E-48 T 22-04-2016 TMO_RS06785 6ee61d1e090fdc48c49acd5bb1bb36fa 364 PANTHER PTHR30514 28 358 9.5E-41 T 22-04-2016 TMO_RS06785 6ee61d1e090fdc48c49acd5bb1bb36fa 364 Pfam PF02685 Glucokinase 34 338 6.5E-61 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 TMO_RS06785 6ee61d1e090fdc48c49acd5bb1bb36fa 364 SUPERFAMILY SSF53067 36 344 8.11E-38 T 22-04-2016 TMO_RS09290 edc8470ffc9eff1f909447ed88ae7d49 379 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 9 357 1.5E-76 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 TMO_RS09290 edc8470ffc9eff1f909447ed88ae7d49 379 PANTHER PTHR33529:SF2 4 369 2.5E-59 T 22-04-2016 TMO_RS09290 edc8470ffc9eff1f909447ed88ae7d49 379 PANTHER PTHR33529 4 369 2.5E-59 T 22-04-2016 TMO_RS09290 edc8470ffc9eff1f909447ed88ae7d49 379 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 355 8.5E-62 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 TMO_RS11120 ec7c62ea18630eb7e069faa12ab2a461 135 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 28 126 5.3E-26 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 SUPERFAMILY SSF88659 102 173 2.43E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 SUPERFAMILY SSF88946 16 100 2.0E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 PANTHER PTHR30173 16 163 5.7E-29 T 22-04-2016 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 Gene3D G3DSA:1.10.1740.10 16 85 8.5E-13 T 22-04-2016 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 Pfam PF04542 Sigma-70 region 2 17 84 1.7E-10 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 170 4.4E-19 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 Pfam PF08281 Sigma-70, region 4 118 166 2.6E-9 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS13630 1c746627eac80d507d7040f86b26dd4c 181 Gene3D G3DSA:1.10.10.10 112 174 1.5E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 303 7.6E-19 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PANTHER PTHR11405:SF16 1 305 4.4E-123 T 22-04-2016 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 1.6E-14 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 1.6E-14 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 138 149 1.6E-14 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.5E-93 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 308 39.788 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 Gene3D G3DSA:3.40.50.1370 150 281 4.1E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PANTHER PTHR11405 1 305 4.4E-123 T 22-04-2016 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 150 3.1E-39 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 137 154 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 44 66 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 262 267 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 82 91 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 221 230 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 287 301 1.7E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 SUPERFAMILY SSF53671 5 307 2.23E-95 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS12820 8e982d61f03057a3d3c7b51cbfa4ef93 311 Gene3D G3DSA:3.40.50.1370 8 149 2.3E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 22 42 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 177 243 2.2E-16 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 PANTHER PTHR30435:SF18 12 246 3.6E-40 T 22-04-2016 TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 Pfam PF00460 Flagella basal body rod protein 17 45 2.1E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 PANTHER PTHR30435 12 246 3.6E-40 T 22-04-2016 TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 17 226 1.2E-53 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 16 131 4.4E-35 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G TMO_RS05530 3dc04e8d68539f9b9485c235dc868c91 250 SUPERFAMILY SSF117143 88 207 5.89E-18 T 22-04-2016 TMO_RS16105 b5a68f8429f20d5563a98d0f24c3e1ac 878 PANTHER PTHR30287 21 121 2.2E-101 T 22-04-2016 TMO_RS16105 b5a68f8429f20d5563a98d0f24c3e1ac 878 PANTHER PTHR30287 138 877 2.2E-101 T 22-04-2016 TMO_RS16105 b5a68f8429f20d5563a98d0f24c3e1ac 878 Pfam PF02687 FtsX-like permease family 756 867 5.6E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 PANTHER PTHR13847 4 361 1.7E-123 T 22-04-2016 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.50.50.60 2 85 3.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.50.50.60 140 221 3.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.50.50.60 325 363 3.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 SUPERFAMILY SSF51905 325 367 3.28E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 SUPERFAMILY SSF51905 4 223 3.28E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 PANTHER PTHR13847:SF207 4 361 1.7E-123 T 22-04-2016 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Pfam PF01266 FAD dependent oxidoreductase 6 363 6.1E-66 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.30.9.10 226 244 1.5E-4 T 22-04-2016 TMO_RS15335 7e49bcb24a74c1a6bce134f4e9bdd8f4 375 Gene3D G3DSA:3.30.9.10 87 139 1.5E-4 T 22-04-2016 TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 PANTHER PTHR32303 2 116 4.1E-51 T 22-04-2016 TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 PANTHER PTHR32303:SF4 2 116 4.1E-51 T 22-04-2016 TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 Pfam PF01011 PQQ enzyme repeat 140 177 2.9E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 SUPERFAMILY SSF50998 2 33 5.49E-48 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 SUPERFAMILY SSF50998 62 213 5.49E-48 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 PANTHER PTHR32303:SF4 132 213 4.1E-51 T 22-04-2016 TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 SMART SM00564 71 106 250.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 SMART SM00564 135 167 0.0041 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 PANTHER PTHR32303 132 213 4.1E-51 T 22-04-2016 TMO_RS07380 0a65c2c040969a33e2fc32a131beec1d 218 Gene3D G3DSA:2.140.10.10 2 213 3.9E-39 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 PANTHER PTHR13774 47 224 1.1E-15 T 22-04-2016 TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 Gene3D G3DSA:3.10.310.10 2 98 7.9E-10 T 22-04-2016 TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 Gene3D G3DSA:3.10.310.10 122 245 1.8E-19 T 22-04-2016 TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 Pfam PF02567 Phenazine biosynthesis-like protein 10 225 2.8E-15 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 SUPERFAMILY SSF54506 10 237 1.92E-26 T 22-04-2016 TMO_RS03800 94284601a3f83a713cb50d91dc0dd908 275 PIRSF PIRSF016184 2 274 3.6E-25 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 Pfam PF00072 Response regulator receiver domain 6 114 4.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 Gene3D G3DSA:3.40.50.2300 2 122 1.8E-35 T 22-04-2016 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 PANTHER PTHR26402 4 228 2.9E-77 T 22-04-2016 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 SUPERFAMILY SSF52172 1 123 2.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 Gene3D G3DSA:1.10.10.10 130 227 5.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 SUPERFAMILY SSF46894 132 226 5.67E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 PANTHER PTHR26402:SF292 4 228 2.9E-77 T 22-04-2016 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 SMART SM00862 150 226 1.3E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 TMO_RS11860 8b9591b4841c59f2b2a5ce63bd62845e 229 SMART SM00448 4 114 7.0E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 SUPERFAMILY SSF52255 15 168 1.29E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 PIRSF PIRSF001338 11 173 8.5E-67 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 SMART SM01001 14 165 3.9E-100 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 PANTHER PTHR11609:SF5 14 166 1.2E-80 T 22-04-2016 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 16 166 4.7E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 PANTHER PTHR11609 14 166 1.2E-80 T 22-04-2016 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 Gene3D G3DSA:3.40.50.7700 11 166 1.6E-71 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 16 169 31.997 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS04235 beaa66c6ff3a31c73547ff810d6a83cf 174 Pfam PF00731 AIR carboxylase 16 162 1.4E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 SUPERFAMILY SSF89796 21 411 6.15E-129 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 PANTHER PTHR24023:SF593 26 398 7.7E-38 T 22-04-2016 TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 Pfam PF02515 CoA-transferase family III 23 388 2.3E-120 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 Gene3D G3DSA:3.40.50.10540 319 411 2.7E-108 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 Gene3D G3DSA:3.40.50.10540 19 230 2.7E-108 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 Gene3D G3DSA:3.30.1540.10 236 318 1.1E-28 T 22-04-2016 TMO_RS07080 4dfd821338f92b7da3b47d4a937812f6 411 PANTHER PTHR24023 26 398 7.7E-38 T 22-04-2016 TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 Pfam PF00156 Phosphoribosyl transferase domain 15 162 3.8E-19 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 Gene3D G3DSA:3.40.50.2020 8 178 1.1E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 10 175 2.6E-49 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 PANTHER PTHR22573 8 177 3.8E-57 T 22-04-2016 TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 PANTHER PTHR22573:SF56 8 177 3.8E-57 T 22-04-2016 TMO_RS00675 bec1a26abc27148a9e9b6dcbd12d6561 180 SUPERFAMILY SSF53271 8 176 7.47E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 SUPERFAMILY SSF52540 222 389 1.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 291 309 9.2E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 245 263 9.2E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 9.2E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 Hamap MF_00900 GTPase HflX [hflX]. 50 418 44.584 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 Pfam PF13167 GTP-binding GTPase N-terminal 48 135 9.1E-25 T 22-04-2016 IPR025121 GTPase HflX, N-terminal TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 Pfam PF01926 50S ribosome-binding GTPase 224 325 1.0E-16 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 46 388 3.4E-127 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PANTHER PTHR10229 17 446 8.4E-156 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PIRSF PIRSF006809 17 449 3.0E-135 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 PANTHER PTHR10229:SF0 17 446 8.4E-156 T 22-04-2016 TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 Gene3D G3DSA:3.40.50.300 223 389 3.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08535 644367919535b3050a4026dd5ebbfe75 455 Pfam PF16360 GTP-binding GTPase Middle Region 137 216 3.8E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 Pfam PF03167 Uracil DNA glycosylase superfamily 138 287 1.0E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 PANTHER PTHR33693:SF1 106 302 5.5E-72 T 22-04-2016 TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 SUPERFAMILY SSF52141 111 296 3.27E-61 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 PANTHER PTHR33693 106 302 5.5E-72 T 22-04-2016 TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 SMART SM00987 136 288 4.3E-40 T 22-04-2016 TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 Gene3D G3DSA:3.40.470.10 111 296 5.9E-68 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 123 295 2.1E-61 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain TMO_RS13475 e35cc05ac687671ba4990cc0c7e8a74d 302 SMART SM00986 136 288 4.3E-40 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 196 218 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 89 100 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 296 323 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 279 290 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 152 167 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 354 365 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 135 151 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 345 354 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PRINTS PR00359 B-class P450 signature 324 339 3.4E-52 T 22-04-2016 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 PANTHER PTHR11712 3 406 1.2E-102 T 22-04-2016 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 22-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 Pfam PF00067 Cytochrome P450 276 371 2.4E-14 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 Pfam PF00067 Cytochrome P450 85 268 6.7E-9 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 Gene3D G3DSA:1.10.630.10 4 408 3.2E-123 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS02715 8b30e390fda114b0e323f6628c169c8d 411 SUPERFAMILY SSF48264 9 405 2.36E-93 T 22-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169:SF48 445 636 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169:SF48 10 421 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169:SF48 666 763 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 585 632 1.4E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 669 713 2.1E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 534 580 1.6E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 892 937 9.8E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 716 763 6.9E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 7.9E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169 837 912 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:1.10.268.10 367 491 1.2E-37 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:3.30.1360.40 241 337 4.1E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 8 944 28.308 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:3.90.199.10 39 221 1.2E-83 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 937 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169 445 636 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169 10 421 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169 666 763 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 PANTHER PTHR10169:SF48 837 912 0.0 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:2.120.10.90 838 937 3.2E-114 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Gene3D G3DSA:2.120.10.90 526 764 3.2E-114 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 499 1.5E-149 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 SMART SM00434 16 494 6.2E-267 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF101904 838 947 1.31E-94 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF101904 665 765 1.31E-94 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF101904 528 633 1.31E-94 T 22-04-2016 TMO_RS07890 9f52d379a018a53e4bb6b973288a8063 978 SUPERFAMILY SSF56719 36 516 4.71E-172 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 TMO_RS04650 76b147acc4f09556e60885f77c412599 249 SMART SM00382 43 228 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04650 76b147acc4f09556e60885f77c412599 249 PANTHER PTHR24220:SF568 20 247 1.1E-85 T 22-04-2016 TMO_RS04650 76b147acc4f09556e60885f77c412599 249 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS04650 76b147acc4f09556e60885f77c412599 249 Pfam PF00005 ABC transporter 35 177 2.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS04650 76b147acc4f09556e60885f77c412599 249 Gene3D G3DSA:3.40.50.300 17 241 8.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04650 76b147acc4f09556e60885f77c412599 249 PANTHER PTHR24220 20 247 1.1E-85 T 22-04-2016 TMO_RS04650 76b147acc4f09556e60885f77c412599 249 SUPERFAMILY SSF52540 18 244 1.08E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 PANTHER PTHR11808:SF45 10 391 2.0E-122 T 22-04-2016 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 PIRSF PIRSF001434 1 392 6.7E-111 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 11 391 5.5E-111 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 PANTHER PTHR11808 10 391 2.0E-122 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 Gene3D G3DSA:3.40.640.10 10 261 4.0E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 388 6.4E-93 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 SUPERFAMILY SSF53383 40 389 1.35E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 Gene3D G3DSA:3.90.1150.10 263 391 1.8E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS11440 8532ea1c6907794d70c09736963364a4 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 PANTHER PTHR11271:SF7 24 441 9.8E-70 T 22-04-2016 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 Gene3D G3DSA:2.30.40.10 5 71 1.3E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51338 4 72 6.12E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 Pfam PF01979 Amidohydrolase family 57 414 7.0E-23 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 PANTHER PTHR11271 24 441 9.8E-70 T 22-04-2016 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 Gene3D G3DSA:3.20.20.140 72 382 1.4E-58 T 22-04-2016 TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51556 60 365 2.12E-64 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS11610 ad10879d45707bf3623e586f0cd2267f 468 SUPERFAMILY SSF51338 340 444 1.53E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 PANTHER PTHR22769 1 156 4.4E-71 T 22-04-2016 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 Gene3D G3DSA:3.90.79.10 36 160 2.0E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 Pfam PF00293 NUDIX domain 40 108 2.6E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 PANTHER PTHR22769:SF17 1 156 4.4E-71 T 22-04-2016 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 Gene3D G3DSA:2.20.70.10 2 35 2.6E-17 T 22-04-2016 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 SUPERFAMILY SSF55811 3 161 5.55E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS00845 cac97c891e4444166289113822ef39b4 197 Pfam PF14803 Nudix N-terminal 3 35 6.0E-17 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- TMO_RS00845 cac97c891e4444166289113822ef39b4 197 PRINTS PR00502 NUDIX hydrolase family signature 79 94 7.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS00845 cac97c891e4444166289113822ef39b4 197 PRINTS PR00502 NUDIX hydrolase family signature 65 79 7.4E-5 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS00845 cac97c891e4444166289113822ef39b4 197 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 PANTHER PTHR12302 20 150 3.4E-27 T 22-04-2016 TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 PANTHER PTHR12302:SF0 20 150 3.4E-27 T 22-04-2016 TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 SUPERFAMILY SSF50199 20 140 3.79E-32 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 Gene3D G3DSA:2.40.50.90 20 136 8.3E-21 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 Pfam PF00565 Staphylococcal nuclease homologue 33 135 3.1E-14 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS02880 6274b6110c5b1310dc68a8f90bca5677 150 SMART SM00318 13 136 8.2E-14 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS16115 a0a6d630cea561db279b2e28764b5297 217 SUPERFAMILY SSF52266 24 206 2.14E-47 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS16115 a0a6d630cea561db279b2e28764b5297 217 PANTHER PTHR30383 28 210 8.9E-39 T 22-04-2016 TMO_RS16115 a0a6d630cea561db279b2e28764b5297 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 191 1.7E-25 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS16115 a0a6d630cea561db279b2e28764b5297 217 Gene3D G3DSA:3.40.50.1110 28 203 1.3E-49 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS09800 33049babd634932bc1241a0e87f8da35 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 38 71 2.8E-5 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS09800 33049babd634932bc1241a0e87f8da35 209 Gene3D G3DSA:2.160.10.10 36 195 3.5E-41 T 22-04-2016 TMO_RS09800 33049babd634932bc1241a0e87f8da35 209 PANTHER PTHR13061:SF11 27 195 8.6E-73 T 22-04-2016 TMO_RS09800 33049babd634932bc1241a0e87f8da35 209 PANTHER PTHR13061 27 195 8.6E-73 T 22-04-2016 TMO_RS09800 33049babd634932bc1241a0e87f8da35 209 SUPERFAMILY SSF51161 32 191 1.16E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS01420 588a052a8469f11fbb59f928472b6ba0 469 Pfam PF13440 Polysaccharide biosynthesis protein 17 306 3.2E-60 T 22-04-2016 TMO_RS01420 588a052a8469f11fbb59f928472b6ba0 469 PANTHER PTHR30250 1 469 6.9E-22 T 22-04-2016 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:3.40.50.970 181 564 5.5E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 PIRSF PIRSF000157 1 963 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Gene3D G3DSA:3.40.50.970 632 816 6.1E-21 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 SUPERFAMILY SSF52518 141 563 2.29E-89 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 SUPERFAMILY SSF52518 601 816 1.18E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 815 961 6.0E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF00676 Dehydrogenase E1 component 232 551 6.6E-60 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 SMART SM00861 618 810 1.9E-57 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 PANTHER PTHR23152 9 961 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF02779 Transketolase, pyrimidine binding domain 617 811 3.6E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 10 961 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_RS15150 52ddf274049dfc00fd9f3edca567bc66 963 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 9 47 1.8E-13 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 TMO_RS16655 2cf971f378367961c5d503fd621d8952 282 Gene3D G3DSA:1.10.3720.10 7 271 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16655 2cf971f378367961c5d503fd621d8952 282 PANTHER PTHR32243:SF31 1 279 3.4E-112 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 TMO_RS16655 2cf971f378367961c5d503fd621d8952 282 PANTHER PTHR32243 1 279 3.4E-112 T 22-04-2016 TMO_RS16655 2cf971f378367961c5d503fd621d8952 282 SUPERFAMILY SSF161098 6 278 2.09E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS16655 2cf971f378367961c5d503fd621d8952 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 277 3.9E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 SUPERFAMILY SSF47616 80 207 2.18E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 117 199 2.0E-14 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 83 1.4E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 Gene3D G3DSA:3.40.30.10 2 85 3.4E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 Gene3D G3DSA:1.20.1050.10 86 203 1.2E-52 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 PANTHER PTHR11260:SF178 4 205 4.9E-73 T 22-04-2016 TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 PANTHER PTHR11260 4 205 4.9E-73 T 22-04-2016 TMO_RS10690 e41ae93f1e0392f0bac05cfbb2d51035 234 SUPERFAMILY SSF52833 2 86 1.14E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS01685 b81efe5fec04f658563423b891ceee0e 301 PANTHER PTHR30482 1 291 2.7E-77 T 22-04-2016 TMO_RS01685 b81efe5fec04f658563423b891ceee0e 301 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 281 2.2E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS01685 b81efe5fec04f658563423b891ceee0e 301 PANTHER PTHR30482:SF10 1 291 2.7E-77 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 PANTHER PTHR30024:SF13 7 318 1.7E-70 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 SUPERFAMILY SSF53850 30 320 5.85E-73 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 Pfam PF16868 NMT1-like family 32 318 2.0E-81 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 Gene3D G3DSA:3.40.190.10 251 320 7.0E-49 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 Gene3D G3DSA:3.40.190.10 28 109 7.0E-49 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 Gene3D G3DSA:3.40.190.10 117 250 1.9E-36 T 22-04-2016 TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 6 318 1.7E-93 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family TMO_RS14200 02835b2505798e77b1cb949f35cbb51d 320 PANTHER PTHR30024 7 318 1.7E-70 T 22-04-2016 TMO_RS03060 f34868640c4b232dee872bb2724b813f 364 PANTHER PTHR22726:SF10 1 336 1.0E-50 T 22-04-2016 TMO_RS03060 f34868640c4b232dee872bb2724b813f 364 Gene3D G3DSA:3.30.2010.10 159 244 5.5E-19 T 22-04-2016 TMO_RS03060 f34868640c4b232dee872bb2724b813f 364 PANTHER PTHR22726 1 336 1.0E-50 T 22-04-2016 TMO_RS03060 f34868640c4b232dee872bb2724b813f 364 Pfam PF01435 Peptidase family M48 163 336 1.2E-27 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 Gene3D G3DSA:1.10.10.60 265 314 2.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 5 184 4.6E-36 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 SMART SM00342 231 313 1.6E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 SUPERFAMILY SSF46689 266 314 5.82E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 PANTHER PTHR11019 218 314 4.0E-22 T 22-04-2016 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 297 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 313 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 309 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 PANTHER PTHR11019:SF52 218 314 4.0E-22 T 22-04-2016 TMO_RS16855 d57a5b01d4aa16fd9fd40497be31fa8c 315 Pfam PF12833 Helix-turn-helix domain 237 314 2.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS01640 3257c635176c1f4f86bc322fb21c6abc 182 PANTHER PTHR34300 8 167 6.7E-48 T 22-04-2016 TMO_RS01640 3257c635176c1f4f86bc322fb21c6abc 182 Pfam PF02592 Putative vitamin uptake transporter 35 163 3.2E-28 T 22-04-2016 IPR003744 Protein of unknown function DUF165 TMO_RS01640 3257c635176c1f4f86bc322fb21c6abc 182 PANTHER PTHR34300:SF1 8 167 6.7E-48 T 22-04-2016 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 PANTHER PTHR11835:SF35 1 368 4.0E-184 T 22-04-2016 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 SMART SM01329 6 361 1.3E-189 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 Gene3D G3DSA:3.40.718.10 2 365 3.4E-122 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 PANTHER PTHR11835 1 368 4.0E-184 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 SUPERFAMILY SSF53659 4 367 1.06E-116 T 22-04-2016 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 361 2.5E-145 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 365 50.657 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 TMO_RS16410 e2440afaa83ed684d58a6fb523c6a6d0 369 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 361 1.0E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:3.40.50.980 202 363 9.3E-27 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:3.30.300.30 442 544 5.0E-31 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 PANTHER PTHR24095 18 542 6.0E-188 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Pfam PF00501 AMP-binding enzyme 37 446 1.1E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 PANTHER PTHR24095:SF117 18 542 6.0E-188 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:3.40.50.980 36 201 3.1E-38 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 534 1.9E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 Gene3D G3DSA:2.30.38.10 365 441 2.3E-21 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 SUPERFAMILY SSF56801 15 545 6.28E-152 T 22-04-2016 TMO_RS03165 b7d524b53cb0b02aa52129b039229634 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 Pfam PF00881 Nitroreductase family 2 191 3.3E-37 T 22-04-2016 IPR029479 Nitroreductase TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 Gene3D G3DSA:3.40.109.10 1 85 7.9E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 Gene3D G3DSA:3.40.109.10 117 215 7.9E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 PANTHER PTHR23026 1 219 6.8E-39 T 22-04-2016 TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 SUPERFAMILY SSF55469 2 214 8.25E-47 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS07120 badbf94e8e635643a054a941b4d8052e 219 PANTHER PTHR23026:SF90 1 219 6.8E-39 T 22-04-2016 TMO_RS00835 3f78c2707cadd4d7d57492b38106a1ed 295 PANTHER PTHR32196 1 293 3.4E-119 T 22-04-2016 TMO_RS00835 3f78c2707cadd4d7d57492b38106a1ed 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 266 2.9E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS00835 3f78c2707cadd4d7d57492b38106a1ed 295 PANTHER PTHR32196:SF27 1 293 3.4E-119 T 22-04-2016 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 214 230 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 SMART SM00997 192 351 7.6E-116 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 423 50.354 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 SMART SM00996 6 430 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.720 194 350 4.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00880 29c5b81641e43773ba2182684e185853 431 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 7 423 5.8E-198 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 SUPERFAMILY SSF52283 352 431 1.08E-121 T 22-04-2016 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 SUPERFAMILY SSF52283 4 191 1.08E-121 T 22-04-2016 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 78 92 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 PIRSF PIRSF001109 1 431 1.7E-201 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.1480 352 431 5.1E-145 T 22-04-2016 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Gene3D G3DSA:3.40.50.1480 6 193 5.1E-145 T 22-04-2016 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 192 351 1.5E-83 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 PANTHER PTHR23420 1 431 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 6 142 1.7E-73 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 TMO_RS00880 29c5b81641e43773ba2182684e185853 431 SUPERFAMILY SSF51735 192 351 1.23E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 SUPERFAMILY SSF52540 5 247 3.52E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Pfam PF00005 ABC transporter 23 178 4.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 PANTHER PTHR24220:SF400 8 249 1.3E-120 T 22-04-2016 TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 247 6.4E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 PANTHER PTHR24220 8 249 1.3E-120 T 22-04-2016 TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 SMART SM00382 31 225 4.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10730 dba9d3c5ab6c8f4d2d8e0278aeaddf4a 251 Gene3D G3DSA:3.40.50.300 3 245 6.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 85 17.717 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 4 88 6.9E-18 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 2 85 3.3E-31 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 PANTHER PTHR21256 1 100 1.4E-40 T 22-04-2016 TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 Gene3D G3DSA:1.10.287.1080 32 82 3.7E-4 T 22-04-2016 TMO_RS16950 9c17174d234c72007c9ff29f871ed688 102 SUPERFAMILY SSF101386 1 89 1.18E-24 T 22-04-2016 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 Pfam PF00034 Cytochrome c 61 157 6.8E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PANTHER PTHR11961:SF6 1 167 7.1E-37 T 22-04-2016 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 Gene3D G3DSA:1.10.760.10 57 159 7.7E-36 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 131 141 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 98 108 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 148 156 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 82 97 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 112 128 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PRINTS PR00604 Class IA and IB cytochrome C signature 69 76 1.4E-14 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 PANTHER PTHR11961 1 167 7.1E-37 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 TMO_RS16075 e9ec2061f35ad68c1e48d3c6ed016928 196 SUPERFAMILY SSF46626 57 159 2.91E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS00475 fa9f3f3767b624b23d0aa8c01b4abd33 94 Gene3D G3DSA:3.30.70.1060 1 91 7.8E-31 T 22-04-2016 TMO_RS00475 fa9f3f3767b624b23d0aa8c01b4abd33 94 SUPERFAMILY SSF54909 1 91 5.36E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS00475 fa9f3f3767b624b23d0aa8c01b4abd33 94 PANTHER PTHR33606 1 91 1.2E-22 T 22-04-2016 TMO_RS00475 fa9f3f3767b624b23d0aa8c01b4abd33 94 Pfam PF03795 YCII-related domain 1 88 2.2E-21 T 22-04-2016 IPR005545 YCII-related TMO_RS11220 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 SUPERFAMILY SSF56219 12 265 2.36E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS11220 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 15 247 2.9E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS11220 e1acaf9d310b2b171d28a1a1e6ed9f5e 266 Gene3D G3DSA:3.60.10.10 6 266 2.4E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 PANTHER PTHR12418:SF28 35 161 9.2E-23 T 22-04-2016 TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 SUPERFAMILY SSF54637 24 150 6.3E-26 T 22-04-2016 IPR029069 HotDog domain TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 PANTHER PTHR12418 35 161 9.2E-23 T 22-04-2016 TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 41 145 9.7E-16 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 Gene3D G3DSA:3.10.129.10 25 151 1.3E-30 T 22-04-2016 IPR029069 HotDog domain TMO_RS12995 44af1dd992683b92634f41c809e4e99f 162 Pfam PF03061 Thioesterase superfamily 71 143 6.5E-11 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 Pfam PF01965 DJ-1/PfpI family 8 175 5.6E-51 T 22-04-2016 IPR002818 DJ-1/PfpI TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 174 7.9E-51 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 Gene3D G3DSA:3.40.50.880 4 178 4.3E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 PANTHER PTHR11019:SF115 8 178 2.4E-63 T 22-04-2016 TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 SUPERFAMILY SSF52317 7 176 8.2E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS05825 e5130a22ca6db5dbe0088677921dd624 183 PANTHER PTHR11019 8 178 2.4E-63 T 22-04-2016 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 PANTHER PTHR11609 3 238 5.4E-113 T 22-04-2016 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 PANTHER PTHR11609:SF2 3 238 5.4E-113 T 22-04-2016 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 SUPERFAMILY SSF56104 5 236 1.8E-78 T 22-04-2016 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 Pfam PF01259 SAICAR synthetase 6 235 1.5E-62 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 237 2.8E-63 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 31.997 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 Gene3D G3DSA:3.30.200.20 7 93 4.1E-37 T 22-04-2016 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 TMO_RS11370 8db76d84142f9fa9de65930e495857ad 256 Gene3D G3DSA:3.30.470.20 94 223 9.9E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 SUPERFAMILY SSF63380 1 101 1.36E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 Pfam PF00677 Lumazine binding domain 109 192 1.2E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 Pfam PF00677 Lumazine binding domain 3 95 5.4E-19 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 SUPERFAMILY SSF63380 101 203 9.35E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.7E-52 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 PANTHER PTHR21098 1 201 2.8E-83 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 PIRSF PIRSF000498 1 208 1.2E-66 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 Gene3D G3DSA:2.40.30.20 5 112 3.3E-25 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS09165 53f630217ca1a083db3a159228fac0bb 210 Gene3D G3DSA:2.40.30.20 113 203 1.1E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 TMO_RS05375 59eb4b3196941c6007dcbfb565dc1060 360 SMART SM00267 211 359 0.008 T 22-04-2016 IPR000160 GGDEF domain TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PANTHER PTHR13789 1 373 2.9E-58 T 22-04-2016 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 SUPERFAMILY SSF51905 10 174 1.05E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 SUPERFAMILY SSF51905 271 379 1.05E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 Pfam PF01494 FAD binding domain 11 319 2.2E-14 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 Gene3D G3DSA:3.50.50.60 272 355 1.5E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 Gene3D G3DSA:3.50.50.60 12 179 1.5E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PANTHER PTHR13789:SF251 1 373 2.9E-58 T 22-04-2016 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 5.8E-12 T 22-04-2016 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 5.8E-12 T 22-04-2016 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.8E-12 T 22-04-2016 TMO_RS01315 866ab943c1252b44a0a71429f932cf5d 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 5.8E-12 T 22-04-2016 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 SUPERFAMILY SSF52540 14 271 1.05E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Gene3D G3DSA:3.40.50.300 313 585 5.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 PANTHER PTHR24220 16 279 3.2E-138 T 22-04-2016 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 PANTHER PTHR24220 306 463 3.2E-138 T 22-04-2016 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 PANTHER PTHR24220:SF586 16 279 3.2E-138 T 22-04-2016 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 PANTHER PTHR24220:SF586 306 463 3.2E-138 T 22-04-2016 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 SMART SM00382 43 250 7.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 SMART SM00382 357 577 2.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Gene3D G3DSA:3.40.50.300 13 274 8.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 288 1.6E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 557 589 1.4E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF00005 ABC transporter 349 505 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 Pfam PF00005 ABC transporter 35 200 3.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10190 322ce95debb3ed000fb287a4fb7a5b68 639 SUPERFAMILY SSF52540 320 577 1.18E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17890 7dfebf7b4f7ebb56d60e6fc98988eaa1 241 Pfam PF01936 NYN domain 146 195 1.4E-9 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type TMO_RS17890 7dfebf7b4f7ebb56d60e6fc98988eaa1 241 Gene3D G3DSA:3.40.50.1010 137 215 1.9E-30 T 22-04-2016 IPR029060 PIN domain-like TMO_RS17890 7dfebf7b4f7ebb56d60e6fc98988eaa1 241 Gene3D G3DSA:3.40.50.1010 1 92 1.9E-30 T 22-04-2016 IPR029060 PIN domain-like TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 Gene3D G3DSA:3.40.190.10 94 194 4.0E-32 T 22-04-2016 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 SUPERFAMILY SSF46785 3 86 2.62E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 PANTHER PTHR30537:SF26 1 308 2.5E-100 T 22-04-2016 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 SUPERFAMILY SSF53850 92 299 5.07E-40 T 22-04-2016 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 PANTHER PTHR30537 1 308 2.5E-100 T 22-04-2016 TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 Gene3D G3DSA:1.10.10.10 2 86 8.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 Pfam PF03466 LysR substrate binding domain 91 298 3.0E-37 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS01265 c482b7cbec6ff373b5d0316e7317b1d1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 Gene3D G3DSA:3.40.1060.10 160 263 1.1E-18 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 SUPERFAMILY SSF53732 1 417 2.22E-95 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 Gene3D G3DSA:3.30.499.10 2 158 1.8E-18 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PANTHER PTHR11670:SF42 1 417 5.3E-87 T 22-04-2016 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 128 143 5.1E-5 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 114 127 5.1E-5 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 203 216 5.1E-5 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PRINTS PR00415 Aconitase family signature 351 364 5.1E-5 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 Gene3D G3DSA:3.30.499.10 274 417 1.8E-39 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 PANTHER PTHR11670 1 417 5.3E-87 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08280 9ad45fbac183b4d043c9df1168682040 418 Pfam PF00330 Aconitase family (aconitate hydratase) 54 409 5.5E-60 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 SUPERFAMILY SSF51621 2 307 8.48E-73 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 PANTHER PTHR30523:SF0 2 303 1.3E-76 T 22-04-2016 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 PANTHER PTHR30523 2 303 1.3E-76 T 22-04-2016 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 Pfam PF00311 Phosphoenolpyruvate carboxylase 90 310 2.6E-60 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 94 105 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 Gene3D G3DSA:1.20.1440.90 237 306 9.0E-10 T 22-04-2016 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 208 223 2.1E-12 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 93 106 2.1E-12 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS25860 b700fd311319aa7704c04aafc1906000 322 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 162 2.1E-12 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 PANTHER PTHR10578 1 379 2.8E-139 T 22-04-2016 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 Gene3D G3DSA:3.20.20.70 6 382 1.1E-135 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 SUPERFAMILY SSF51395 5 379 1.25E-94 T 22-04-2016 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 PIRSF PIRSF000138 1 383 8.2E-133 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 Pfam PF01070 FMN-dependent dehydrogenase 16 377 2.2E-127 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 PANTHER PTHR10578:SF65 1 379 2.8E-139 T 22-04-2016 TMO_RS02370 dc2af6e59e4a8cc1f097f265af1480ad 385 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 276 282 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 TMO_RS13460 4fc07f958abbe2c1fff157c4ac0e84f4 493 SUPERFAMILY SSF52200 35 148 8.37E-9 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS13460 4fc07f958abbe2c1fff157c4ac0e84f4 493 Pfam PF13676 TIR domain 36 146 7.2E-16 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 PANTHER PTHR30158 44 420 1.2E-181 T 22-04-2016 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 PANTHER PTHR30158:SF9 44 420 1.2E-181 T 22-04-2016 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 395 5.6E-83 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 84 317 7.7E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 Gene3D G3DSA:2.40.50.100 194 224 6.5E-19 T 22-04-2016 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 Gene3D G3DSA:2.40.50.100 86 119 6.5E-19 T 22-04-2016 TMO_RS11325 c6aa79bd924e71ee7afc62fd10975d74 421 SUPERFAMILY SSF111369 75 322 9.29E-68 T 22-04-2016 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 Gene3D G3DSA:3.30.70.260 326 392 4.0E-9 T 22-04-2016 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 PANTHER PTHR10314:SF17 2 355 1.2E-140 T 22-04-2016 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 SUPERFAMILY SSF53686 4 311 6.68E-88 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 399 6.0E-128 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 PANTHER PTHR10314 2 355 1.2E-140 T 22-04-2016 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 SUPERFAMILY SSF55021 327 392 8.33E-8 T 22-04-2016 TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 303 8.4E-74 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme TMO_RS08100 78092945c40a3ba82c5494ecffec7b73 413 Gene3D G3DSA:3.40.50.1100 69 321 2.3E-71 T 22-04-2016 TMO_RS09315 409d31658ed163190aee4bce969feaab 291 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 23 286 47.966 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TMO_RS09315 409d31658ed163190aee4bce969feaab 291 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 24 284 2.8E-69 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 TMO_RS09315 409d31658ed163190aee4bce969feaab 291 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 58 86 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 TMO_RS09315 409d31658ed163190aee4bce969feaab 291 SUPERFAMILY SSF53335 22 286 2.61E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09315 409d31658ed163190aee4bce969feaab 291 SMART SM00650 39 219 1.8E-62 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 TMO_RS09315 409d31658ed163190aee4bce969feaab 291 Gene3D G3DSA:3.40.50.150 11 220 2.5E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09315 409d31658ed163190aee4bce969feaab 291 Gene3D G3DSA:1.10.8.100 223 286 5.4E-22 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like TMO_RS09315 409d31658ed163190aee4bce969feaab 291 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 284 2.5E-45 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TMO_RS09315 409d31658ed163190aee4bce969feaab 291 PANTHER PTHR11727 8 285 7.6E-84 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 Pfam PF00672 HAMP domain 193 261 7.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 SMART SM00283 302 556 7.3E-46 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 SMART SM00304 213 266 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 SUPERFAMILY SSF58104 241 268 9.94E-60 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 SUPERFAMILY SSF58104 308 555 9.94E-60 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089 280 559 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089 138 161 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089 187 248 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 371 554 5.5E-36 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 1.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 352 1.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 1.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 1.5E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 Gene3D G3DSA:1.10.287.950 318 524 9.1E-46 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089:SF40 280 559 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089:SF40 138 161 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 PANTHER PTHR32089:SF40 187 248 2.4E-114 T 22-04-2016 TMO_RS14675 03b6a4a26bc563208305690a85befee8 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 184 8.0E-24 T 22-04-2016 IPR024478 4HB MCP domain TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 SUPERFAMILY SSF46785 4 71 4.19E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 Pfam PF07729 FCD domain 77 197 1.8E-21 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 Gene3D G3DSA:1.10.10.10 3 69 6.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 Gene3D G3DSA:1.20.120.530 71 200 1.5E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 SUPERFAMILY SSF48008 75 201 2.04E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 SMART SM00345 9 67 2.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.3E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 PANTHER PTHR11751 5 93 1.0E-21 T 22-04-2016 TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 PANTHER PTHR11751:SF436 5 93 1.0E-21 T 22-04-2016 TMO_RS02205 8357358146f0273d493c8a120bdc231a 213 SMART SM00895 77 198 4.6E-17 T 22-04-2016 IPR011711 GntR, C-terminal TMO_RS08810 5b986890aa7c034a2d16530da0f91e5e 193 Gene3D G3DSA:3.40.630.30 15 193 5.9E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS08810 5b986890aa7c034a2d16530da0f91e5e 193 SUPERFAMILY SSF55729 17 165 8.86E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS08810 5b986890aa7c034a2d16530da0f91e5e 193 Pfam PF13302 Acetyltransferase (GNAT) domain 23 163 4.2E-29 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS08810 5b986890aa7c034a2d16530da0f91e5e 193 PANTHER PTHR13256:SF19 18 192 1.2E-35 T 22-04-2016 TMO_RS08810 5b986890aa7c034a2d16530da0f91e5e 193 PANTHER PTHR13256 18 192 1.2E-35 T 22-04-2016 TMO_RS08365 dcfe3d1b1cee06b560777afbfaf24e8d 404 Gene3D G3DSA:1.10.3720.10 149 386 1.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08365 dcfe3d1b1cee06b560777afbfaf24e8d 404 PANTHER PTHR30177:SF8 105 384 9.5E-85 T 22-04-2016 TMO_RS08365 dcfe3d1b1cee06b560777afbfaf24e8d 404 SUPERFAMILY SSF161098 187 387 4.97E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08365 dcfe3d1b1cee06b560777afbfaf24e8d 404 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 399 5.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS08365 dcfe3d1b1cee06b560777afbfaf24e8d 404 PANTHER PTHR30177 105 384 9.5E-85 T 22-04-2016 TMO_RS11840 eb112eb398d89600027463917efaa4cd 212 PANTHER PTHR30086 4 210 4.4E-56 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS11840 eb112eb398d89600027463917efaa4cd 212 PANTHER PTHR30086:SF2 4 210 4.4E-56 T 22-04-2016 TMO_RS11840 eb112eb398d89600027463917efaa4cd 212 PIRSF PIRSF006324 1 212 3.7E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS11840 eb112eb398d89600027463917efaa4cd 212 Pfam PF01810 LysE type translocator 16 209 2.5E-30 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS09520 61bc2855f9c1104d673e829cb518b924 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 32 210 1.6E-54 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like TMO_RS09520 61bc2855f9c1104d673e829cb518b924 216 SUPERFAMILY SSF51197 17 211 2.2E-60 T 22-04-2016 TMO_RS09520 61bc2855f9c1104d673e829cb518b924 216 Gene3D G3DSA:2.60.120.590 16 212 4.5E-58 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like TMO_RS09520 61bc2855f9c1104d673e829cb518b924 216 PANTHER PTHR16557 45 210 3.6E-50 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 PANTHER PTHR10909 1 173 5.5E-109 T 22-04-2016 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 Gene3D G3DSA:2.40.110.10 26 126 6.0E-32 T 22-04-2016 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 Gene3D G3DSA:1.10.540.10 1 22 2.8E-4 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 PANTHER PTHR10909:SF285 1 173 5.5E-109 T 22-04-2016 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 SUPERFAMILY SSF56645 1 149 1.96E-43 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 Gene3D G3DSA:1.20.140.10 127 173 2.1E-16 T 22-04-2016 TMO_RS23325 ecb3541041468bbabe40d54d2a352dec 174 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 26 124 2.6E-22 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 SUPERFAMILY SSF103025 15 292 2.04E-89 T 22-04-2016 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Pfam PF01571 Aminomethyltransferase folate-binding domain 21 265 2.3E-86 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 17 373 2.3E-102 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 PANTHER PTHR13847:SF209 15 372 1.9E-148 T 22-04-2016 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:3.30.1360.120 16 83 5.6E-24 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:3.30.1360.120 132 243 7.1E-30 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:3.30.70.1400 84 131 3.6E-7 T 22-04-2016 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 SUPERFAMILY SSF101790 286 379 1.96E-24 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 PIRSF PIRSF006487 5 379 2.0E-79 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 369 2.0E-22 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 PANTHER PTHR13847 15 372 1.9E-148 T 22-04-2016 TMO_RS14065 559d450ff500e33229e6953a89cfe5b4 379 Gene3D G3DSA:2.40.30.110 291 368 1.4E-26 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 TMO_RS14220 69cc9588bf2487a22136bea5ea33e521 413 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 13 410 2.3E-142 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA TMO_RS14220 69cc9588bf2487a22136bea5ea33e521 413 Pfam PF08886 Glutamate-cysteine ligase 12 410 2.4E-159 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA TMO_RS29620 7c058a56f3914fb2a9897d2b3ca6e5a6 151 PANTHER PTHR32332:SF12 2 146 3.0E-23 T 22-04-2016 TMO_RS29620 7c058a56f3914fb2a9897d2b3ca6e5a6 151 PANTHER PTHR32332 2 146 3.0E-23 T 22-04-2016 TMO_RS29620 7c058a56f3914fb2a9897d2b3ca6e5a6 151 Pfam PF03060 Nitronate monooxygenase 2 137 3.5E-24 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 TMO_RS29620 7c058a56f3914fb2a9897d2b3ca6e5a6 151 Gene3D G3DSA:3.20.20.70 2 128 1.0E-19 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS29620 7c058a56f3914fb2a9897d2b3ca6e5a6 151 SUPERFAMILY SSF51412 2 77 3.21E-16 T 22-04-2016 TMO_RS14195 cee42431d84006318057da8e89e010dc 724 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 45 705 4.2E-205 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein TMO_RS14195 cee42431d84006318057da8e89e010dc 724 Pfam PF11874 Domain of unknown function (DUF3394) 638 687 5.2E-12 T 22-04-2016 IPR021814 Protein of unknown function DUF3394 TMO_RS14195 cee42431d84006318057da8e89e010dc 724 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 159 619 2.2E-83 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS14195 cee42431d84006318057da8e89e010dc 724 PANTHER PTHR33362 16 724 1.2E-226 T 22-04-2016 TMO_RS14195 cee42431d84006318057da8e89e010dc 724 PANTHER PTHR33362:SF1 16 724 1.2E-226 T 22-04-2016 TMO_RS15355 5e574ec2a41d487efa476ade88d03bf7 255 Gene3D G3DSA:3.40.50.10320 29 231 3.7E-36 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain TMO_RS15355 5e574ec2a41d487efa476ade88d03bf7 255 PANTHER PTHR12993 17 237 4.4E-21 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related TMO_RS15355 5e574ec2a41d487efa476ade88d03bf7 255 Pfam PF02585 GlcNAc-PI de-N-acetylase 32 159 1.1E-20 T 22-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related TMO_RS15355 5e574ec2a41d487efa476ade88d03bf7 255 SUPERFAMILY SSF102588 29 227 1.7E-38 T 22-04-2016 IPR024078 Putative deacetylase LmbE-like domain TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 Gene3D G3DSA:3.40.50.720 3 254 3.7E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 SUPERFAMILY SSF51735 10 254 1.05E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PANTHER PTHR24322:SF650 15 144 1.5E-73 T 22-04-2016 TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PANTHER PTHR24322:SF650 160 192 1.5E-73 T 22-04-2016 TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.0E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 2.8E-70 T 22-04-2016 TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 6.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 6.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 6.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 191 4.0E-5 T 22-04-2016 TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PANTHER PTHR24322 15 144 1.5E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS03265 797c8fbcb409e2604802400cb5b4043c 258 PANTHER PTHR24322 160 192 1.5E-73 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 PANTHER PTHR11941:SF53 254 331 9.4E-126 T 22-04-2016 TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 PANTHER PTHR11941:SF53 2 192 9.4E-126 T 22-04-2016 TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 PANTHER PTHR11941 254 331 9.4E-126 T 22-04-2016 TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 PANTHER PTHR11941 2 192 9.4E-126 T 22-04-2016 TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 SUPERFAMILY SSF52096 263 333 3.09E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 SUPERFAMILY SSF52096 3 197 3.09E-61 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 348 2.0E-122 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 TMO_RS08125 69fc0a631190ce02077750f80d6fb53f 359 Gene3D G3DSA:3.90.226.10 3 203 1.7E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 Pfam PF00311 Phosphoenolpyruvate carboxylase 145 925 2.9E-278 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 149 160 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 SUPERFAMILY SSF51621 20 925 4.87E-292 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 578 590 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 11 925 18.882 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 414 434 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 263 278 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 201 217 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 752 778 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 148 161 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 576 596 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 618 647 6.7E-56 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PANTHER PTHR30523:SF0 14 925 0.0 T 22-04-2016 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 PANTHER PTHR30523 14 925 0.0 T 22-04-2016 TMO_RS02125 8447662c6ecfdda11a0a03e6564f0e24 925 Gene3D G3DSA:1.20.1440.90 292 417 3.3E-24 T 22-04-2016 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 SUPERFAMILY SSF47973 4 149 1.03E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 PIRSF PIRSF002122 2 156 4.0E-61 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.7E-68 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 Gene3D G3DSA:1.10.455.10 7 156 4.2E-68 T 22-04-2016 IPR023798 Ribosomal protein S7 domain TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 PANTHER PTHR11205 1 156 6.3E-94 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.945 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 TMO_RS13275 8b931620c417d99b0014e8da2b4782a1 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.7E-68 T 22-04-2016 IPR023798 Ribosomal protein S7 domain TMO_RS09140 8ff6f730bd00a182255a61fd777b942b 189 Gene3D G3DSA:3.30.70.900 17 73 3.4E-4 T 22-04-2016 TMO_RS09140 8ff6f730bd00a182255a61fd777b942b 189 Gene3D G3DSA:3.30.70.900 98 166 2.4E-5 T 22-04-2016 TMO_RS09140 8ff6f730bd00a182255a61fd777b942b 189 SUPERFAMILY SSF54909 3 78 9.39E-7 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS09140 8ff6f730bd00a182255a61fd777b942b 189 Pfam PF16157 Domain of unknown function (DUF4865) 1 183 1.4E-57 T 22-04-2016 IPR032349 Protein of unknown function DUF4865 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 PANTHER PTHR10314 15 64 3.3E-21 T 22-04-2016 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 PANTHER PTHR10314 87 154 3.3E-21 T 22-04-2016 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 21 274 4.7E-77 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 PANTHER PTHR10314:SF4 15 64 3.3E-21 T 22-04-2016 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 PANTHER PTHR10314:SF4 87 154 3.3E-21 T 22-04-2016 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 27 279 36.074 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 SUPERFAMILY SSF51366 16 260 7.72E-87 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 Pfam PF00290 Tryptophan synthase alpha chain 21 259 4.8E-93 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 61 74 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 TMO_RS16315 a7b3a998ef928fc50bb38a752914b43a 287 Gene3D G3DSA:3.20.20.70 16 282 8.3E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 Pfam PF00199 Catalase 17 397 3.5E-188 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 SMART SM01060 17 401 7.6E-278 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 SUPERFAMILY SSF56634 13 491 3.93E-210 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PANTHER PTHR11465 14 487 1.1E-286 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 ProSitePatterns PS00438 Catalase proximal active site signature. 53 69 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 330 356 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 114 131 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 93 111 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 298 325 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 133 151 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PRINTS PR00067 Catalase signature 30 53 3.7E-72 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 Gene3D G3DSA:2.40.180.10 12 367 1.3E-174 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 PIRSF PIRSF038928 6 490 3.7E-220 T 22-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 Pfam PF06628 Catalase-related immune-responsive 425 485 4.0E-23 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS01310 cd61e70b4bd3e7898ee0a410e76a316b 494 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 343 351 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 SUPERFAMILY SSF56327 144 311 7.78E-58 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 SUPERFAMILY SSF51735 5 144 3.96E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 8.5E-42 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 6.536727E-30 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 6.536727E-30 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 6.536727E-30 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 6.536727E-30 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 6.536727E-30 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 Gene3D G3DSA:3.90.110.10 145 312 4.3E-63 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 6.6E-31 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PANTHER PTHR11540:SF16 1 310 1.9E-149 T 22-04-2016 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 313 42.22 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PIRSF PIRSF000102 1 313 1.6E-105 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 PANTHER PTHR11540 1 310 1.9E-149 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 308 2.5E-131 T 22-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 TMO_RS15165 09942092deb2c0368ee58807d7504ec3 314 Gene3D G3DSA:3.40.50.720 2 144 8.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04255 8a05115fc805eff6b5f364194c3170ae 163 PANTHER PTHR33204:SF10 1 161 3.1E-37 T 22-04-2016 TMO_RS04255 8a05115fc805eff6b5f364194c3170ae 163 SUPERFAMILY SSF46785 6 144 4.25E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04255 8a05115fc805eff6b5f364194c3170ae 163 PANTHER PTHR33204 1 161 3.1E-37 T 22-04-2016 TMO_RS04255 8a05115fc805eff6b5f364194c3170ae 163 Gene3D G3DSA:1.10.10.10 5 110 1.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04255 8a05115fc805eff6b5f364194c3170ae 163 Pfam PF01638 HxlR-like helix-turn-helix 25 105 2.0E-14 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 Gene3D G3DSA:3.30.230.10 8 116 4.2E-24 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 SUPERFAMILY SSF54211 7 115 1.69E-19 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 113 9.0E-13 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 Pfam PF00825 Ribonuclease P 7 115 1.5E-20 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 PANTHER PTHR33992 8 116 1.4E-17 T 22-04-2016 TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 96 2.0E-6 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_RS13685 c8dd6d3849d31c727b0a1dfd8350d0b1 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 114 12.891 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 TMO_RS04550 14ed50e2dab57465d9d1dc450cb85b71 244 PANTHER PTHR30625:SF3 18 244 1.3E-63 T 22-04-2016 TMO_RS04550 14ed50e2dab57465d9d1dc450cb85b71 244 PANTHER PTHR30625 18 244 1.3E-63 T 22-04-2016 TMO_RS04550 14ed50e2dab57465d9d1dc450cb85b71 244 TIGRFAM TIGR02796 tolQ: protein TolQ 21 238 3.6E-86 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 TMO_RS04550 14ed50e2dab57465d9d1dc450cb85b71 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 90 226 1.5E-41 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 SUPERFAMILY SSF48498 100 213 6.99E-29 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 PANTHER PTHR30055 15 213 7.5E-47 T 22-04-2016 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 53 76 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 45 1.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 Gene3D G3DSA:1.10.357.10 26 213 4.4E-42 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 Pfam PF16925 Bacterial transcriptional repressor C-terminal 100 213 1.2E-48 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 SUPERFAMILY SSF46689 23 92 3.33E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 74 9.3E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07510 47ce86c41d7a25b6d5e64891f9938d01 226 PANTHER PTHR30055:SF20 15 213 7.5E-47 T 22-04-2016 TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 PANTHER PTHR11695:SF5 21 332 3.4E-60 T 22-04-2016 TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 Gene3D G3DSA:3.90.180.10 7 92 1.8E-11 T 22-04-2016 IPR011032 GroES-like TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 SUPERFAMILY SSF50129 7 149 7.46E-27 T 22-04-2016 IPR011032 GroES-like TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 PANTHER PTHR11695 21 332 3.4E-60 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 SUPERFAMILY SSF51735 118 298 3.52E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 92 7.0E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 SMART SM00829 16 331 1.1E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS06940 40c99c64c1ede5d2697f87ab59a5aceb 334 Gene3D G3DSA:3.40.50.720 127 300 2.0E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SUPERFAMILY SSF158472 335 384 8.89E-12 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 702 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 706 716 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 735 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 593 8.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Pfam PF08448 PAS fold 408 516 3.8E-5 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SMART SM00387 636 762 2.7E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SUPERFAMILY SSF55785 392 515 7.61E-9 T 22-04-2016 IPR000014 PAS domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423 400 668 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423 688 741 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423 16 21 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Gene3D G3DSA:3.30.565.10 582 761 1.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SUPERFAMILY SSF55874 587 763 5.76E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423:SF471 400 668 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423:SF471 688 741 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PANTHER PTHR24423:SF471 16 21 1.1E-50 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Pfam PF00672 HAMP domain 316 384 8.2E-18 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SUPERFAMILY SSF47384 520 594 3.92E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Gene3D G3DSA:3.30.450.20 393 516 9.9E-11 T 22-04-2016 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SMART SM00388 525 596 4.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SMART SM00091 402 470 1.9E-4 T 22-04-2016 IPR000014 PAS domain TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 PIRSF PIRSF037532 24 765 9.2E-230 T 22-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 SMART SM00304 335 388 3.5E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Gene3D G3DSA:1.10.287.130 521 581 4.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08560 c41da9087401ddc3c94f9be0f7cac5b7 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 637 761 1.3E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS16125 b285ba97a686e0a6575b33894337d374 176 PANTHER PTHR13061 1 169 2.9E-59 T 22-04-2016 TMO_RS16125 b285ba97a686e0a6575b33894337d374 176 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 124 2.2E-9 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS16125 b285ba97a686e0a6575b33894337d374 176 Gene3D G3DSA:2.160.10.10 4 169 1.5E-42 T 22-04-2016 TMO_RS16125 b285ba97a686e0a6575b33894337d374 176 SUPERFAMILY SSF51161 3 169 1.94E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 PANTHER PTHR30055 1 88 4.5E-12 T 22-04-2016 TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 PANTHER PTHR30055:SF53 1 88 4.5E-12 T 22-04-2016 TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 SUPERFAMILY SSF48498 89 198 4.45E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 SUPERFAMILY SSF46689 5 72 2.82E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 Gene3D G3DSA:1.10.10.60 6 63 1.5E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS10865 873f3c4ba83b446a878216e50619289b 202 Gene3D G3DSA:1.10.357.10 72 198 2.6E-8 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS00805 a80063b061248be137d1ad558d00f650 421 SUPERFAMILY SSF53474 116 403 4.18E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00805 a80063b061248be137d1ad558d00f650 421 Gene3D G3DSA:3.40.50.1820 119 403 4.8E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00805 a80063b061248be137d1ad558d00f650 421 PANTHER PTHR36837 123 416 4.9E-40 T 22-04-2016 TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 PANTHER PTHR11365:SF2 11 706 1.2E-76 T 22-04-2016 TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 SUPERFAMILY SSF53067 288 338 2.27E-5 T 22-04-2016 TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 SUPERFAMILY SSF53067 18 93 2.27E-5 T 22-04-2016 TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 19 206 4.2E-42 T 22-04-2016 IPR008040 Hydantoinaseoxoprolinase, N-terminal TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 PANTHER PTHR11365 11 706 1.2E-76 T 22-04-2016 TMO_RS07195 c51bcc0f42a68ffe868ee0966e0efcfb 725 Pfam PF01968 Hydantoinase/oxoprolinase 232 517 4.2E-76 T 22-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 Pfam PF05193 Peptidase M16 inactive domain 174 344 9.1E-37 T 22-04-2016 IPR007863 Peptidase M16, C-terminal TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 Pfam PF00675 Insulinase (Peptidase family M16) 18 165 7.7E-46 T 22-04-2016 IPR011765 Peptidase M16, N-terminal TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 39 62 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 Gene3D G3DSA:3.30.830.10 225 419 7.6E-59 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 PANTHER PTHR11851 8 424 5.7E-143 T 22-04-2016 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 Gene3D G3DSA:3.30.830.10 9 219 3.8E-61 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 SUPERFAMILY SSF63411 7 217 2.75E-62 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS14130 58a6cb6575c811496b24b5500f4dd258 425 SUPERFAMILY SSF63411 224 425 2.71E-47 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 PANTHER PTHR36837 164 660 5.9E-207 T 22-04-2016 TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 Pfam PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 62 101 7.6E-20 T 22-04-2016 IPR022211 Poly-beta-hydroxybutyrate polymerase N-terminal TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 PANTHER PTHR36837:SF2 164 660 5.9E-207 T 22-04-2016 TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 169 338 1.3E-51 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 Gene3D G3DSA:3.40.50.1820 294 629 1.3E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17515 fe2b8fe95251a2d43e0960ceadba7ce3 660 SUPERFAMILY SSF53474 283 579 9.63E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 Gene3D G3DSA:3.30.450.40 82 243 1.6E-39 T 22-04-2016 IPR029016 GAF domain-like TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 Gene3D G3DSA:1.10.10.10 8 81 6.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 SUPERFAMILY SSF46785 10 85 1.59E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 PANTHER PTHR30136 10 246 4.0E-54 T 22-04-2016 TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 SUPERFAMILY SSF55781 76 244 7.85E-40 T 22-04-2016 IPR029016 GAF domain-like TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 SMART SM00346 10 101 3.2E-25 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 Pfam PF09339 IclR helix-turn-helix domain 12 62 7.8E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS00155 ee96b64ee24c8392cbd6559a8d3df2da 246 Pfam PF01614 Bacterial transcriptional regulator 133 238 8.2E-13 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 PANTHER PTHR30043:SF1 19 268 1.0E-104 T 22-04-2016 TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 Gene3D G3DSA:1.10.3720.10 73 265 4.3E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 267 6.4E-88 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 267 8.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 SUPERFAMILY SSF161098 72 259 2.09E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS10515 326e6ebbde1b3d6eb6cc128e71a505da 268 PANTHER PTHR30043 19 268 1.0E-104 T 22-04-2016 TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 Gene3D G3DSA:1.20.5.460 253 274 1.1E-6 T 22-04-2016 TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 PIRSF PIRSF034452 1 276 2.7E-149 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 Gene3D G3DSA:3.20.20.70 1 252 2.5E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 PANTHER PTHR31862 10 276 2.2E-111 T 22-04-2016 TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 SUPERFAMILY SSF51621 3 197 3.77E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS07355 ffc50bde770141f48925c8eb4052a746 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 274 5.7E-130 T 22-04-2016 IPR009215 TIM-barrel domain, IGPS-like TMO_RS10785 66992a0f057fb82a72a0433af4223af6 391 PANTHER PTHR30199:SF0 1 387 2.2E-108 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS10785 66992a0f057fb82a72a0433af4223af6 391 Pfam PF03594 Benzoate membrane transport protein 3 374 3.0E-115 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS10785 66992a0f057fb82a72a0433af4223af6 391 PANTHER PTHR30199 1 387 2.2E-108 T 22-04-2016 TMO_RS10785 66992a0f057fb82a72a0433af4223af6 391 TIGRFAM TIGR00843 benE: benzoate transporter 3 373 7.6E-87 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS00855 15322ec0348f6d319c35f72c8c7a27e5 183 PANTHER PTHR36917 1 171 8.4E-44 T 22-04-2016 TMO_RS00855 15322ec0348f6d319c35f72c8c7a27e5 183 Pfam PF04279 Intracellular septation protein A 1 172 8.2E-55 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 TMO_RS00855 15322ec0348f6d319c35f72c8c7a27e5 183 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 174 7.2E-50 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 TMO_RS00855 15322ec0348f6d319c35f72c8c7a27e5 183 PANTHER PTHR36917:SF1 1 171 8.4E-44 T 22-04-2016 TMO_RS00855 15322ec0348f6d319c35f72c8c7a27e5 183 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 17.64 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 TMO_RS06065 0b444dc63417323b6ac203435bc75e38 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 430 2.9E-88 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS06065 0b444dc63417323b6ac203435bc75e38 434 PIRSF PIRSF006066 7 434 3.4E-84 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS06065 0b444dc63417323b6ac203435bc75e38 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 424 1.3E-90 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS06065 0b444dc63417323b6ac203435bc75e38 434 PANTHER PTHR33362 12 434 6.7E-141 T 22-04-2016 TMO_RS06065 0b444dc63417323b6ac203435bc75e38 434 PANTHER PTHR33362:SF5 12 434 6.7E-141 T 22-04-2016 TMO_RS08875 7e3a4679d5fa9e5eb36e9e3b0f49cab3 259 Gene3D G3DSA:3.40.190.10 22 151 3.3E-47 T 22-04-2016 TMO_RS08875 7e3a4679d5fa9e5eb36e9e3b0f49cab3 259 PIRSF PIRSF002854 2 259 3.5E-78 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS08875 7e3a4679d5fa9e5eb36e9e3b0f49cab3 259 Pfam PF03180 NLPA lipoprotein 24 259 3.5E-74 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS08875 7e3a4679d5fa9e5eb36e9e3b0f49cab3 259 SUPERFAMILY SSF53850 24 259 1.04E-67 T 22-04-2016 TMO_RS08875 7e3a4679d5fa9e5eb36e9e3b0f49cab3 259 PANTHER PTHR30429 23 259 2.9E-93 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS00925 0f247900a3b70cc0fe06a821449a5467 213 Pfam PF03968 OstA-like protein 60 192 1.6E-16 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal TMO_RS00925 0f247900a3b70cc0fe06a821449a5467 213 Gene3D G3DSA:2.60.450.10 49 205 4.2E-29 T 22-04-2016 TMO_RS00925 0f247900a3b70cc0fe06a821449a5467 213 PANTHER PTHR36504 131 213 1.3E-22 T 22-04-2016 TMO_RS00925 0f247900a3b70cc0fe06a821449a5467 213 PANTHER PTHR36504 18 99 1.3E-22 T 22-04-2016 TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 Gene3D G3DSA:1.20.1250.20 30 197 1.2E-7 T 22-04-2016 TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 Gene3D G3DSA:1.20.1250.20 227 406 1.8E-8 T 22-04-2016 TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 SUPERFAMILY SSF103473 32 392 3.53E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 Pfam PF13347 MFS/sugar transport protein 18 432 1.4E-75 T 22-04-2016 TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 PANTHER PTHR11328 18 446 1.2E-48 T 22-04-2016 TMO_RS10410 a1ddece54463e0acb2c5661dc58fca7d 483 PANTHER PTHR11328:SF24 18 446 1.2E-48 T 22-04-2016 TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 SUPERFAMILY SSF53335 3 267 2.03E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 PANTHER PTHR11061:SF33 7 214 2.6E-71 T 22-04-2016 TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 PANTHER PTHR11061:SF33 254 263 2.6E-71 T 22-04-2016 TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 Pfam PF03602 Conserved hypothetical protein 95 122 203 5.1E-8 T 22-04-2016 TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 Gene3D G3DSA:3.40.50.150 19 293 3.3E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 PANTHER PTHR11061 7 214 2.6E-71 T 22-04-2016 TMO_RS05580 883d9a7065be2c7644cd4ca72241f96d 307 PANTHER PTHR11061 254 263 2.6E-71 T 22-04-2016 TMO_RS11045 b6055c988d8f8cd897b678f919161ccc 812 SUPERFAMILY SSF52540 398 748 8.18E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11045 b6055c988d8f8cd897b678f919161ccc 812 Gene3D G3DSA:3.40.50.300 412 582 3.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11045 b6055c988d8f8cd897b678f919161ccc 812 Gene3D G3DSA:3.40.50.300 630 707 3.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11045 b6055c988d8f8cd897b678f919161ccc 812 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 182 389 3.0E-13 T 22-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 TMO_RS11045 b6055c988d8f8cd897b678f919161ccc 812 SMART SM00382 441 708 8.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 196 217 1.5E-9 T 22-04-2016 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 285 297 1.5E-9 T 22-04-2016 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 244 1.5E-9 T 22-04-2016 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 56 81 1.5E-9 T 22-04-2016 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PANTHER PTHR22773 50 322 8.1E-60 T 22-04-2016 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 Pfam PF00361 Proton-conducting membrane transporter 107 324 3.7E-30 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 TMO_RS28945 6cce11fff801e091577e891f3ac61aa6 489 PANTHER PTHR22773:SF67 50 322 8.1E-60 T 22-04-2016 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 174 3.2E-25 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 SUPERFAMILY SSF88946 6 95 1.62E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 SUPERFAMILY SSF88659 109 175 2.24E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 Gene3D G3DSA:1.10.1740.10 9 100 3.5E-24 T 22-04-2016 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 Pfam PF04542 Sigma-70 region 2 21 88 2.9E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 Gene3D G3DSA:1.10.10.10 114 176 1.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 Pfam PF08281 Sigma-70, region 4 118 170 6.3E-11 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 PANTHER PTHR30173:SF31 5 174 6.9E-39 T 22-04-2016 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 42 74 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS15900 59f05fefc9942f30414d3a54c524f761 178 PANTHER PTHR30173 5 174 6.9E-39 T 22-04-2016 TMO_RS17080 10cc83fc84cfea8f08fec0d6c9344b82 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 21 86 1.4E-16 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 TMO_RS12435 114baa340e025dcc6169552261d6d8e2 288 PANTHER PTHR23088:SF12 1 282 4.8E-70 T 22-04-2016 TMO_RS12435 114baa340e025dcc6169552261d6d8e2 288 Pfam PF00795 Carbon-nitrogen hydrolase 21 214 8.1E-24 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS12435 114baa340e025dcc6169552261d6d8e2 288 Gene3D G3DSA:3.60.110.10 1 278 1.1E-51 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS12435 114baa340e025dcc6169552261d6d8e2 288 PANTHER PTHR23088 1 282 4.8E-70 T 22-04-2016 TMO_RS12435 114baa340e025dcc6169552261d6d8e2 288 SUPERFAMILY SSF56317 2 274 2.88E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS04740 aa04d8711fa0e0e36006193cab535830 255 Pfam PF01323 DSBA-like thioredoxin domain 3 214 3.3E-36 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 TMO_RS04740 aa04d8711fa0e0e36006193cab535830 255 PANTHER PTHR13887 1 229 1.7E-53 T 22-04-2016 TMO_RS04740 aa04d8711fa0e0e36006193cab535830 255 PANTHER PTHR13887:SF10 1 229 1.7E-53 T 22-04-2016 TMO_RS04740 aa04d8711fa0e0e36006193cab535830 255 Gene3D G3DSA:3.40.30.10 1 214 5.4E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS04740 aa04d8711fa0e0e36006193cab535830 255 SUPERFAMILY SSF52833 1 218 3.54E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15390 b5b02090190d372ccff745a845c29b2b 144 Pfam PF03061 Thioesterase superfamily 55 128 2.3E-14 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS15390 b5b02090190d372ccff745a845c29b2b 144 PANTHER PTHR21660 44 141 7.1E-16 T 22-04-2016 TMO_RS15390 b5b02090190d372ccff745a845c29b2b 144 Gene3D G3DSA:3.10.129.10 6 142 3.4E-42 T 22-04-2016 IPR029069 HotDog domain TMO_RS15390 b5b02090190d372ccff745a845c29b2b 144 SUPERFAMILY SSF54637 18 141 2.69E-26 T 22-04-2016 IPR029069 HotDog domain TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 411 431 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 91 113 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 184 202 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 212 231 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PRINTS PR00175 Sodium/alanine symporter signature 350 372 4.7E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 Pfam PF01235 Sodium:alanine symporter family 56 453 2.1E-143 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PANTHER PTHR30330 1 476 1.3E-210 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 3.7E-135 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS04475 ef6322eb4cf93e447d4c6003536e5abd 476 PANTHER PTHR30330:SF1 1 476 1.3E-210 T 22-04-2016 TMO_RS08720 d89b40991cfb3a4471b741c5b39b2ea3 250 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 57 223 2.8E-25 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 TMO_RS08720 d89b40991cfb3a4471b741c5b39b2ea3 250 PANTHER PTHR34136 1 239 5.7E-19 T 22-04-2016 TMO_RS11235 585d82ba607772475ddfa58925063bf9 504 Pfam PF13289 SIR2-like domain 103 242 1.6E-26 T 22-04-2016 TMO_RS11235 585d82ba607772475ddfa58925063bf9 504 SUPERFAMILY SSF52467 20 203 7.19E-9 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 PIRSF PIRSF006241 1 260 4.2E-88 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 8.1E-31 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 PANTHER PTHR12110 1 257 5.7E-79 T 22-04-2016 TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 Gene3D G3DSA:3.20.20.150 1 256 7.5E-78 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 PANTHER PTHR12110:SF22 1 257 5.7E-79 T 22-04-2016 TMO_RS07940 e97744e535c5d5ac88bf9bdc4d546d8d 263 SUPERFAMILY SSF51658 1 256 1.7E-73 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 Pfam PF02515 CoA-transferase family III 1 363 5.3E-94 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 SUPERFAMILY SSF89796 2 387 7.06E-103 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 Gene3D G3DSA:3.30.1540.10 213 287 9.4E-16 T 22-04-2016 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 PANTHER PTHR24023 215 374 4.9E-26 T 22-04-2016 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 PANTHER PTHR24023 9 192 4.9E-26 T 22-04-2016 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 PANTHER PTHR24023:SF593 215 374 4.9E-26 T 22-04-2016 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 PANTHER PTHR24023:SF593 9 192 4.9E-26 T 22-04-2016 TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 Gene3D G3DSA:3.40.50.10540 288 388 3.9E-86 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS16130 e0d8717cd145e513def20d6f33aa3a8a 396 Gene3D G3DSA:3.40.50.10540 2 195 3.9E-86 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS14120 0e673fafa116f92354cade280e46c3ae 216 SUPERFAMILY SSF55729 12 198 2.61E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS14120 0e673fafa116f92354cade280e46c3ae 216 PANTHER PTHR13256 14 206 3.9E-48 T 22-04-2016 TMO_RS14120 0e673fafa116f92354cade280e46c3ae 216 Pfam PF13302 Acetyltransferase (GNAT) domain 19 174 4.3E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS14120 0e673fafa116f92354cade280e46c3ae 216 PANTHER PTHR13256:SF24 14 206 3.9E-48 T 22-04-2016 TMO_RS14120 0e673fafa116f92354cade280e46c3ae 216 Gene3D G3DSA:3.40.630.30 13 198 3.7E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 PANTHER PTHR30592 9 264 1.6E-90 T 22-04-2016 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 259 3.2E-50 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 SUPERFAMILY SSF53927 6 259 2.32E-71 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 Gene3D G3DSA:3.40.140.10 125 259 1.3E-46 T 22-04-2016 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 Pfam PF02634 FdhD/NarQ family 23 259 1.2E-69 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 PANTHER PTHR30592:SF1 9 264 1.6E-90 T 22-04-2016 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 Gene3D G3DSA:3.10.20.10 24 109 2.4E-24 T 22-04-2016 TMO_RS05150 e3e17a1df009b14d28c2532e71280221 265 PIRSF PIRSF015626 6 262 8.1E-73 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 PANTHER PTHR11079 10 325 1.2E-71 T 22-04-2016 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 Gene3D G3DSA:3.10.290.10 16 92 2.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 Pfam PF00849 RNA pseudouridylate synthase 104 257 5.8E-37 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 SUPERFAMILY SSF55120 96 321 3.52E-59 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 SUPERFAMILY SSF55174 16 69 1.16E-9 T 22-04-2016 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 SMART SM00363 17 80 2.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 PANTHER PTHR11079:SF74 10 325 1.2E-71 T 22-04-2016 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 Pfam PF01479 S4 domain 17 63 8.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 TMO_RS13110 78f593fe6b1b1b692b36ebcc302eb346 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 317 4.5E-58 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 Pfam PF02575 YbaB/EbfC DNA-binding family 8 98 1.2E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 PANTHER PTHR33449 1 107 2.4E-47 T 22-04-2016 TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 102 8.8E-30 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 Gene3D G3DSA:3.30.1310.10 1 107 3.5E-43 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 SUPERFAMILY SSF82607 8 102 8.24E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 PIRSF PIRSF004555 1 106 7.3E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS13545 be81f2a8eebf0826e52199868a479fd1 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 23.201 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family TMO_RS03460 055f6b36cf444932e81f08c24670d4f8 204 Pfam PF13580 SIS domain 18 152 7.1E-22 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 TMO_RS03460 055f6b36cf444932e81f08c24670d4f8 204 SUPERFAMILY SSF53697 13 196 3.84E-47 T 22-04-2016 TMO_RS03460 055f6b36cf444932e81f08c24670d4f8 204 PANTHER PTHR30390 9 192 1.8E-66 T 22-04-2016 TMO_RS03460 055f6b36cf444932e81f08c24670d4f8 204 PANTHER PTHR30390:SF6 9 192 1.8E-66 T 22-04-2016 TMO_RS03460 055f6b36cf444932e81f08c24670d4f8 204 Gene3D G3DSA:3.40.50.10490 10 196 1.0E-52 T 22-04-2016 TMO_RS03560 82042cf757756777ebed46f87d0539da 352 PANTHER PTHR33376 9 340 8.4E-38 T 22-04-2016 TMO_RS03560 82042cf757756777ebed46f87d0539da 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 312 2.2E-29 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS16180 96b0166c344ce872e568060e19a29f43 59 Gene3D G3DSA:2.60.260.40 2 50 1.4E-21 T 22-04-2016 IPR019401 Zinc finger, CHCC-type TMO_RS16180 96b0166c344ce872e568060e19a29f43 59 Pfam PF10276 Zinc-finger domain 12 47 1.4E-17 T 22-04-2016 IPR019401 Zinc finger, CHCC-type TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 206 221 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 144 157 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Pfam PF02954 Bacterial regulatory protein, Fis family 446 484 1.7E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PANTHER PTHR32071 19 371 2.5E-182 T 22-04-2016 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PANTHER PTHR32071 404 502 2.5E-182 T 22-04-2016 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF46689 429 486 1.86E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 333 342 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:1.10.8.60 293 363 8.9E-24 T 22-04-2016 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 489 4.9E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 469 4.9E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF52172 22 164 3.47E-14 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Pfam PF00158 Sigma-54 interaction domain 121 286 1.2E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:3.40.50.300 117 292 5.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 SMART SM00382 140 283 1.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 SUPERFAMILY SSF52540 120 361 1.39E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PANTHER PTHR32071:SF21 19 371 2.5E-182 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 PANTHER PTHR32071:SF21 404 502 2.5E-182 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:3.40.50.2300 16 116 1.9E-9 T 22-04-2016 TMO_RS06255 82c98f9afc45197dd5f27e582405947b 509 Gene3D G3DSA:1.10.10.60 431 486 4.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 Gene3D G3DSA:3.40.50.1950 10 193 8.1E-76 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 PANTHER PTHR30108:SF10 9 193 1.9E-103 T 22-04-2016 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 10 193 35.888 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 Pfam PF02441 Flavoprotein 11 134 4.6E-24 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 11 191 3.0E-69 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 PANTHER PTHR30108 9 193 1.9E-103 T 22-04-2016 TMO_RS04270 c9928a7a62a73d0c332485a9ae9bc3dc 201 SUPERFAMILY SSF52507 10 193 1.31E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 PANTHER PTHR10204 1 202 1.2E-68 T 22-04-2016 TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 Pfam PF02525 Flavodoxin-like fold 1 201 3.4E-47 T 22-04-2016 IPR003680 Flavodoxin-like fold TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 SUPERFAMILY SSF52218 1 205 3.52E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 Gene3D G3DSA:3.40.50.360 1 203 2.1E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 PANTHER PTHR10204:SF37 1 202 1.2E-68 T 22-04-2016 TMO_RS09020 bac4f51ae88ea2f704c668c2f12d1683 209 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 203 32.112 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 TMO_RS11960 c844b78b456044d1c980c4444a7ffc04 143 Pfam PF07030 Protein of unknown function (DUF1320) 3 115 2.9E-33 T 22-04-2016 IPR009752 Bacteriophage Mu, Gp36 TMO_RS09900 b600f81c8929fe49f153d591d63a6df1 204 PANTHER PTHR33269 1 201 8.4E-65 T 22-04-2016 TMO_RS09900 b600f81c8929fe49f153d591d63a6df1 204 PANTHER PTHR33269:SF4 1 201 8.4E-65 T 22-04-2016 TMO_RS09900 b600f81c8929fe49f153d591d63a6df1 204 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 168 3.0E-39 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 Gene3D G3DSA:1.10.760.10 17 226 2.8E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 PANTHER PTHR10422 22 162 1.6E-68 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 PANTHER PTHR10422:SF23 22 162 1.6E-68 T 22-04-2016 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 SUPERFAMILY SSF46626 17 172 6.52E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 SUPERFAMILY SSF46626 214 223 6.52E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 6 229 6.1E-95 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_RS11480 d2eddbfaad174f26b62dae41e3b81d1a 230 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 230 4.1E-100 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 Gene3D G3DSA:1.10.357.10 3 189 6.3E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 PANTHER PTHR30328 1 161 6.7E-12 T 22-04-2016 TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 SUPERFAMILY SSF48498 79 190 7.23E-14 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 SUPERFAMILY SSF46689 5 75 4.37E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 Pfam PF13305 WHG domain 83 167 2.2E-12 T 22-04-2016 IPR025996 WHG domain TMO_RS08465 bb7f03f352282f364a538b301051ef50 197 PANTHER PTHR30328:SF6 1 161 6.7E-12 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 SUPERFAMILY SSF111369 42 111 3.01E-11 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 286 7.6E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 PANTHER PTHR30386:SF7 1 337 4.1E-106 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 PANTHER PTHR30386 1 337 4.1E-106 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 SUPERFAMILY SSF111369 183 281 7.45E-12 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 Gene3D G3DSA:2.40.50.100 44 76 3.2E-19 T 22-04-2016 TMO_RS14615 f9714261d2cb087ec14e85f90ef12645 337 Gene3D G3DSA:2.40.50.100 207 240 3.2E-19 T 22-04-2016 TMO_RS13115 812bbf6d51731f96313d239f82818ef5 131 PANTHER PTHR28259 7 131 2.8E-30 T 22-04-2016 TMO_RS13115 812bbf6d51731f96313d239f82818ef5 131 TIGRFAM TIGR00494 crcB: protein CrcB 11 122 1.8E-26 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_RS13115 812bbf6d51731f96313d239f82818ef5 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 9 127 18.932 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_RS13115 812bbf6d51731f96313d239f82818ef5 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 122 3.7E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 SUPERFAMILY SSF53383 98 465 3.84E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 9.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 9.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 SMART SM00345 21 80 1.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 SUPERFAMILY SSF46785 17 83 1.53E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 Gene3D G3DSA:1.10.10.10 16 82 5.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 Pfam PF00155 Aminotransferase class I and II 138 388 2.8E-25 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 4.4E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 PANTHER PTHR11751 109 467 3.2E-97 T 22-04-2016 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 PANTHER PTHR11751:SF10 109 467 3.2E-97 T 22-04-2016 TMO_RS16910 9706effd71ff4f0f03043ff057adb64c 467 Gene3D G3DSA:3.40.640.10 140 355 1.3E-55 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 PANTHER PTHR33495 5 125 1.2E-17 T 22-04-2016 TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 18 121 8.3E-21 T 22-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 SUPERFAMILY SSF52091 25 125 8.83E-20 T 22-04-2016 IPR002645 STAS domain TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 Gene3D G3DSA:3.30.750.24 18 125 2.9E-21 T 22-04-2016 IPR002645 STAS domain TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 Pfam PF01740 STAS domain 34 121 1.3E-12 T 22-04-2016 IPR002645 STAS domain TMO_RS06035 dfb5dbd2cad213536f3ef3955a9a8cb4 129 PANTHER PTHR33495:SF2 5 125 1.2E-17 T 22-04-2016 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 PANTHER PTHR34595 13 516 1.2E-287 T 22-04-2016 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 PIRSF PIRSF005522 28 516 2.2E-223 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 SUPERFAMILY SSF56059 58 252 1.59E-60 T 22-04-2016 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 SUPERFAMILY SSF56059 361 507 1.59E-60 T 22-04-2016 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 Pfam PF14403 Circularly permuted ATP-grasp type 2 114 492 3.5E-167 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 TMO_RS07675 715d97c1e64cef373468157fd2a2950e 516 PANTHER PTHR34595:SF3 13 516 1.2E-287 T 22-04-2016 TMO_RS04990 d99c5816ce18cd675b158c71585bf7a5 412 Gene3D G3DSA:3.40.50.2000 187 361 1.4E-29 T 22-04-2016 TMO_RS04990 d99c5816ce18cd675b158c71585bf7a5 412 PANTHER PTHR12526 265 380 2.7E-36 T 22-04-2016 TMO_RS04990 d99c5816ce18cd675b158c71585bf7a5 412 PANTHER PTHR12526 62 232 2.7E-36 T 22-04-2016 TMO_RS04990 d99c5816ce18cd675b158c71585bf7a5 412 SUPERFAMILY SSF53756 66 363 6.28E-53 T 22-04-2016 TMO_RS04990 d99c5816ce18cd675b158c71585bf7a5 412 Pfam PF00534 Glycosyl transferases group 1 187 361 3.1E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 PANTHER PTHR11695 35 350 1.1E-67 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 Pfam PF00107 Zinc-binding dehydrogenase 172 274 6.1E-17 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 SUPERFAMILY SSF50129 24 170 7.76E-25 T 22-04-2016 IPR011032 GroES-like TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 PANTHER PTHR11695:SF605 35 350 1.1E-67 T 22-04-2016 TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 Gene3D G3DSA:3.40.50.720 169 277 3.3E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 SMART SM00829 30 347 3.8E-11 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 Gene3D G3DSA:3.90.180.10 24 168 1.1E-26 T 22-04-2016 IPR011032 GroES-like TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 SUPERFAMILY SSF51735 134 281 6.76E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS09500 222f3e59d0741467ecccac316e65c444 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 47 106 1.0E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 PANTHER PTHR24220 23 321 3.8E-113 T 22-04-2016 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 SUPERFAMILY SSF52540 46 306 1.13E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 Gene3D G3DSA:3.40.50.300 33 258 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 5.8E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 SMART SM00382 46 242 9.7E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 PANTHER PTHR24220:SF529 23 321 3.8E-113 T 22-04-2016 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 Pfam PF00005 ABC transporter 38 184 4.4E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS05960 1d84e5a405c294535919361cbb96caf7 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 322 9.9E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS02475 1908aa3452d022bd6d0addd12ff0e096 264 Gene3D G3DSA:3.90.226.10 6 205 1.1E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS02475 1908aa3452d022bd6d0addd12ff0e096 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 262 1.5E-56 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS02475 1908aa3452d022bd6d0addd12ff0e096 264 SUPERFAMILY SSF52096 4 263 8.0E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS02475 1908aa3452d022bd6d0addd12ff0e096 264 PANTHER PTHR11941 4 261 2.7E-79 T 22-04-2016 TMO_RS02475 1908aa3452d022bd6d0addd12ff0e096 264 Gene3D G3DSA:1.10.12.10 206 264 1.0E-16 T 22-04-2016 IPR014748 Crontonase, C-terminal TMO_RS13045 cce9699cfe3fb3fbac4903483b345416 348 PANTHER PTHR23028 2 337 5.7E-28 T 22-04-2016 TMO_RS13045 cce9699cfe3fb3fbac4903483b345416 348 Pfam PF01757 Acyltransferase family 10 319 1.8E-25 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 TMO_RS13910 7a9e0ee619df1e7d40c2c1702afd910b 1264 PANTHER PTHR23304:SF96 10 1263 0.0 T 22-04-2016 TMO_RS13910 7a9e0ee619df1e7d40c2c1702afd910b 1264 Pfam PF02514 CobN/Magnesium Chelatase 139 1243 0.0 T 22-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 TMO_RS13910 7a9e0ee619df1e7d40c2c1702afd910b 1264 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1257 0.0 T 22-04-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 TMO_RS13910 7a9e0ee619df1e7d40c2c1702afd910b 1264 PANTHER PTHR23304 10 1263 0.0 T 22-04-2016 TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 PANTHER PTHR24220 20 259 1.8E-173 T 22-04-2016 TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 Pfam PF00005 ABC transporter 34 182 8.8E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 SMART SM00382 43 230 2.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 PIRSF PIRSF039085 15 258 1.2E-107 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 SUPERFAMILY SSF52540 18 252 1.11E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 Gene3D G3DSA:3.40.50.300 17 253 4.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12650 cea27a2f2caa80eaae688a1d1c767e83 259 PANTHER PTHR24220:SF490 20 259 1.8E-173 T 22-04-2016 TMO_RS16770 b64dc7bb47a2026845aad32bb500496d 116 SUPERFAMILY SSF56399 1 107 1.5E-30 T 22-04-2016 TMO_RS16770 b64dc7bb47a2026845aad32bb500496d 116 Pfam PF06108 Protein of unknown function (DUF952) 6 91 1.3E-28 T 22-04-2016 IPR009297 Protein of unknown function DUF952 TMO_RS16770 b64dc7bb47a2026845aad32bb500496d 116 PANTHER PTHR34129 1 113 8.2E-25 T 22-04-2016 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PANTHER PTHR11349 1 139 3.3E-69 T 22-04-2016 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 SMART SM00562 3 140 1.0E-86 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 Gene3D G3DSA:3.30.70.141 1 139 7.2E-57 T 22-04-2016 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 SUPERFAMILY SSF54919 1 139 3.54E-56 T 22-04-2016 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.276 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 Pfam PF00334 Nucleoside diphosphate kinase 4 138 4.7E-55 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.4E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.4E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.4E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.4E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS09265 892b97fc83c1e2d129f3503fd64afd61 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.4E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 SUPERFAMILY SSF53955 35 208 1.24E-50 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 Gene3D G3DSA:1.10.3810.10 39 206 1.3E-48 T 22-04-2016 TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 PANTHER PTHR30400 1 208 1.1E-75 T 22-04-2016 TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 PANTHER PTHR30400:SF0 1 208 1.1E-75 T 22-04-2016 TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 2 204 4.8E-61 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 TMO_RS01220 a2b2b0ab89817ad8649fd1aabd0b1199 215 Pfam PF00912 Transglycosylase 42 198 8.9E-43 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 PANTHER PTHR13693:SF57 2 403 7.2E-231 T 22-04-2016 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 Pfam PF00155 Aminotransferase class I and II 46 390 2.2E-77 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 SUPERFAMILY SSF53383 2 398 1.28E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 Gene3D G3DSA:3.90.1150.10 281 394 6.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 PANTHER PTHR13693 2 403 7.2E-231 T 22-04-2016 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 Gene3D G3DSA:3.40.640.10 63 280 1.9E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 TMO_RS10325 313e3380236f8e33f241a61b85b85147 408 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 1 401 3.6E-202 T 22-04-2016 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: REACT_9431|UniPathway: UPA00251 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 PANTHER PTHR24095 8 508 6.7E-116 T 22-04-2016 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 502 9.7E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Gene3D G3DSA:3.40.50.980 174 333 3.7E-32 T 22-04-2016 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Gene3D G3DSA:2.30.38.10 334 409 1.0E-18 T 22-04-2016 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Gene3D G3DSA:3.40.50.980 19 173 3.2E-28 T 22-04-2016 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Pfam PF00501 AMP-binding enzyme 21 415 6.3E-75 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 SUPERFAMILY SSF56801 7 508 6.8E-127 T 22-04-2016 TMO_RS08195 a1acbfd02421766387b5769596c66153 511 Gene3D G3DSA:3.30.300.30 416 508 2.9E-24 T 22-04-2016 TMO_RS08390 a448474734ade5bb5093df35f02951c5 92 SUPERFAMILY SSF143011 1 92 4.71E-14 T 22-04-2016 TMO_RS08390 a448474734ade5bb5093df35f02951c5 92 PANTHER PTHR40266 1 92 2.2E-40 T 22-04-2016 TMO_RS08390 a448474734ade5bb5093df35f02951c5 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 10 92 8.2E-18 T 22-04-2016 IPR007711 Toxin HigB-1 TMO_RS08390 a448474734ade5bb5093df35f02951c5 92 PANTHER PTHR40266:SF2 1 92 2.2E-40 T 22-04-2016 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 Gene3D G3DSA:3.40.309.10 295 472 2.0E-58 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 PANTHER PTHR11699 1 508 0.0 T 22-04-2016 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 SUPERFAMILY SSF53720 18 501 5.24E-163 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 PANTHER PTHR11699:SF97 1 508 0.0 T 22-04-2016 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 Gene3D G3DSA:3.40.605.10 12 294 6.0E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS05385 428521a0c18e9775ee7d48fe1019b669 508 Pfam PF00171 Aldehyde dehydrogenase family 29 494 5.7E-165 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS11650 feb3ce15ef6734d6b5822855a90cb29c 1095 Pfam PF13550 Putative phage tail protein 576 743 1.5E-34 T 22-04-2016 IPR032876 Tip attachment protein J TMO_RS00035 d7a3150ce1639beb52cb6018d56fe3b5 271 Gene3D G3DSA:3.40.830.10 4 267 5.6E-89 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS00035 d7a3150ce1639beb52cb6018d56fe3b5 271 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 32 250 5.1E-31 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS00035 d7a3150ce1639beb52cb6018d56fe3b5 271 PIRSF PIRSF006157 4 271 1.0E-80 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 TMO_RS00035 d7a3150ce1639beb52cb6018d56fe3b5 271 SUPERFAMILY SSF53213 9 268 1.57E-78 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 TMO_RS00035 d7a3150ce1639beb52cb6018d56fe3b5 271 PANTHER PTHR30096 9 270 3.8E-87 T 22-04-2016 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 SUPERFAMILY SSF161111 25 157 3.27E-45 T 22-04-2016 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 SUPERFAMILY SSF161111 185 249 3.27E-45 T 22-04-2016 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 PANTHER PTHR11562 7 329 1.9E-93 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 Pfam PF01545 Cation efflux family 29 248 8.2E-34 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 PANTHER PTHR11562:SF40 7 329 1.9E-93 T 22-04-2016 TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 Gene3D G3DSA:1.20.1510.10 26 248 1.7E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS01335 55bf049fa85c2817856c5b5c770ea17b 331 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 299 1.6E-63 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS10720 f6c09a0cc479cbb34f3fa9b5e1985002 258 PANTHER PTHR31118 1 33 8.9E-37 T 22-04-2016 TMO_RS10720 f6c09a0cc479cbb34f3fa9b5e1985002 258 PANTHER PTHR31118 53 258 8.9E-37 T 22-04-2016 TMO_RS10720 f6c09a0cc479cbb34f3fa9b5e1985002 258 SUPERFAMILY SSF102198 2 256 5.36E-57 T 22-04-2016 TMO_RS10720 f6c09a0cc479cbb34f3fa9b5e1985002 258 Gene3D G3DSA:3.50.30.50 3 257 8.3E-62 T 22-04-2016 TMO_RS10720 f6c09a0cc479cbb34f3fa9b5e1985002 258 Pfam PF04199 Putative cyclase 6 186 5.4E-36 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 PANTHER PTHR30055 11 206 4.5E-31 T 22-04-2016 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 Gene3D G3DSA:1.10.357.10 71 205 1.1E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 Gene3D G3DSA:1.10.10.60 15 70 2.2E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 5.5E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 5.5E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 72 5.1E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 SUPERFAMILY SSF46689 16 85 1.99E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04895 071a3bae1b454be42478903370b8be99 206 SUPERFAMILY SSF48498 100 204 2.91E-17 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 155 456 2.3E-97 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 Gene3D G3DSA:3.40.630.10 142 462 2.9E-110 T 22-04-2016 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PANTHER PTHR11963 103 463 2.4E-129 T 22-04-2016 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 SUPERFAMILY SSF53187 147 463 8.16E-100 T 22-04-2016 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PANTHER PTHR11963:SF13 103 463 2.4E-129 T 22-04-2016 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 308 328 4.9E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 336 351 4.9E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 4.9E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 4.9E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS16035 d00820f90f5696cd1600fc65628fb6f5 468 PRINTS PR00481 Cytosol aminopeptidase signature 227 244 4.9E-42 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.40.190.10 202 302 4.8E-30 T 22-04-2016 TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 SUPERFAMILY SSF53850 39 516 5.07E-92 T 22-04-2016 TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 PANTHER PTHR30290 1 517 6.9E-84 T 22-04-2016 TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 409 6.8E-67 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.10.105.10 303 492 1.8E-32 T 22-04-2016 TMO_RS05970 0fead5fb361980541f110d5ea26f5b90 524 Gene3D G3DSA:3.90.76.10 49 201 2.0E-21 T 22-04-2016 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PANTHER PTHR10795 46 175 4.7E-49 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PANTHER PTHR10795 197 353 4.7E-49 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 SUPERFAMILY SSF103515 509 802 8.37E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 318 328 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 SMART SM00869 527 796 2.5E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 Pfam PF03797 Autotransporter beta-domain 526 784 6.4E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 134 147 2.3E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 317 333 2.3E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PRINTS PR00723 Subtilisin serine protease family (S8) signature 74 93 2.3E-19 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 79 90 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 Pfam PF00082 Subtilase family 74 359 1.5E-40 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 505 802 1.6E-15 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 Gene3D G3DSA:3.40.50.200 54 357 5.0E-65 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 Gene3D G3DSA:2.40.128.130 522 802 3.0E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PANTHER PTHR10795:SF419 46 175 4.7E-49 T 22-04-2016 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 PANTHER PTHR10795:SF419 197 353 4.7E-49 T 22-04-2016 TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 138 148 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site TMO_RS29175 7f4de4b99d091776d65c364a8871ad0e 802 SUPERFAMILY SSF52743 59 356 1.18E-61 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 Pfam PF01464 Transglycosylase SLT domain 472 574 1.8E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 Gene3D G3DSA:1.25.40.10 252 351 7.2E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 SUPERFAMILY SSF48435 85 447 3.92E-16 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 PANTHER PTHR21666 442 611 4.9E-35 T 22-04-2016 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 482 510 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 SUPERFAMILY SSF53955 473 618 8.28E-40 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS13480 7d2a9efdb8e17a76efc0ce69a3ce8d0e 647 Gene3D G3DSA:1.10.530.10 473 615 1.6E-39 T 22-04-2016 TMO_RS12620 c8629b93a21f424512e23e232def3a21 404 SUPERFAMILY SSF52833 15 164 1.22E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12620 c8629b93a21f424512e23e232def3a21 404 Gene3D G3DSA:3.40.30.10 15 144 1.4E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12620 c8629b93a21f424512e23e232def3a21 404 SMART SM00702 193 373 2.9E-6 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 TMO_RS12620 c8629b93a21f424512e23e232def3a21 404 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 285 372 7.5E-12 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 TMO_RS15170 873d5fad0f5574ea9faf6006399a6f7c 392 SUPERFAMILY SSF52540 82 209 8.78E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15170 873d5fad0f5574ea9faf6006399a6f7c 392 Pfam PF03969 AFG1-like ATPase 13 387 9.0E-127 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 TMO_RS15170 873d5fad0f5574ea9faf6006399a6f7c 392 PANTHER PTHR12169 11 391 2.8E-157 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 TMO_RS15170 873d5fad0f5574ea9faf6006399a6f7c 392 Gene3D G3DSA:3.40.50.300 80 209 3.7E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04405 37e8b6ddde5acd6aefe0c55631fa5f05 146 Pfam PF00011 Hsp20/alpha crystallin family 44 140 3.8E-18 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain TMO_RS04405 37e8b6ddde5acd6aefe0c55631fa5f05 146 Gene3D G3DSA:2.60.40.790 17 140 4.4E-20 T 22-04-2016 IPR008978 HSP20-like chaperone TMO_RS04405 37e8b6ddde5acd6aefe0c55631fa5f05 146 PANTHER PTHR11527 40 141 6.3E-25 T 22-04-2016 IPR031107 Small heat shock protein HSP20 TMO_RS04405 37e8b6ddde5acd6aefe0c55631fa5f05 146 PANTHER PTHR11527:SF127 40 141 6.3E-25 T 22-04-2016 TMO_RS04405 37e8b6ddde5acd6aefe0c55631fa5f05 146 SUPERFAMILY SSF49764 43 140 2.83E-20 T 22-04-2016 IPR008978 HSP20-like chaperone TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 132 3.4E-30 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 PANTHER PTHR13822 1 132 2.9E-30 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 18.85 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 3.5E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 87 1.0E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 Gene3D G3DSA:2.60.15.10 1 89 2.9E-27 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 PANTHER PTHR13822:SF7 1 132 2.9E-30 T 22-04-2016 TMO_RS15040 a5a67966df00210c5e8135c39cb9dd68 133 SUPERFAMILY SSF51344 5 85 1.7E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 SUPERFAMILY SSF52540 6 236 2.72E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 Pfam PF00005 ABC transporter 23 172 1.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 PANTHER PTHR24220 9 255 1.1E-108 T 22-04-2016 TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 SMART SM00382 32 222 3.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 Gene3D G3DSA:3.40.50.300 8 244 1.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS09430 55706855794d8db292d48636ed6a23d2 259 PANTHER PTHR24220:SF567 9 255 1.1E-108 T 22-04-2016 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 Pfam PF01425 Amidase 29 443 8.7E-86 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 PANTHER PTHR11895:SF24 10 460 2.1E-192 T 22-04-2016 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 Gene3D G3DSA:3.90.1300.10 9 454 4.7E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 SUPERFAMILY SSF75304 9 452 9.42E-118 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 43 602 2.6E-240 T 22-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 TMO_RS06030 abad10e3a748b38214eebbb83485894f 607 PANTHER PTHR11895 10 460 2.1E-192 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 PANTHER PTHR13847 22 345 2.2E-52 T 22-04-2016 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 PANTHER PTHR13847 364 448 2.2E-52 T 22-04-2016 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 SUPERFAMILY SSF51905 29 242 2.94E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 SUPERFAMILY SSF51905 382 446 2.94E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Gene3D G3DSA:3.30.9.10 242 380 6.9E-9 T 22-04-2016 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Gene3D G3DSA:3.30.9.10 109 162 6.9E-9 T 22-04-2016 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Pfam PF01266 FAD dependent oxidoreductase 30 421 9.3E-60 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Gene3D G3DSA:3.50.50.60 163 241 2.9E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Gene3D G3DSA:3.50.50.60 382 441 2.9E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS05175 1c6cd88631da8079c2b21cdb19702885 451 Gene3D G3DSA:3.50.50.60 23 105 2.9E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11965 a8cf452cf65a994b23bc739e2a3979cf 314 Gene3D G3DSA:3.90.1690.10 4 313 6.3E-71 T 22-04-2016 TMO_RS14050 0aac03c7b8f3dcc6cf8eb175b8a0e85d 501 SUPERFAMILY SSF53383 45 491 3.88E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS14050 0aac03c7b8f3dcc6cf8eb175b8a0e85d 501 Gene3D G3DSA:3.40.640.10 90 335 6.1E-31 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS14050 0aac03c7b8f3dcc6cf8eb175b8a0e85d 501 PANTHER PTHR11773 16 490 1.3E-192 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 TMO_RS14050 0aac03c7b8f3dcc6cf8eb175b8a0e85d 501 Pfam PF00266 Aminotransferase class-V 167 284 1.3E-8 T 22-04-2016 IPR000192 Aminotransferase class V domain TMO_RS05655 03ef5c15a5d95d4ea7726bd84cdbada7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 4.0E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_RS05655 03ef5c15a5d95d4ea7726bd84cdbada7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 4.0E-5 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_RS05655 03ef5c15a5d95d4ea7726bd84cdbada7 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 28 104 2.4E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_RS05655 03ef5c15a5d95d4ea7726bd84cdbada7 104 PANTHER PTHR34653 24 104 1.2E-12 T 22-04-2016 TMO_RS05655 03ef5c15a5d95d4ea7726bd84cdbada7 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 104 14.548 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 Gene3D G3DSA:1.20.1250.20 19 206 4.5E-39 T 22-04-2016 TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 SUPERFAMILY SSF103473 15 441 1.83E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 PANTHER PTHR23505 280 439 8.0E-77 T 22-04-2016 TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 PANTHER PTHR23505 18 261 8.0E-77 T 22-04-2016 TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 Pfam PF07690 Major Facilitator Superfamily 29 398 2.0E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS10255 a5667a6465ad43afa88d8c98059c88d7 449 Gene3D G3DSA:1.20.1250.20 223 439 2.8E-13 T 22-04-2016 TMO_RS04310 56d444fe72716af74421bd87342307c1 269 Pfam PF12706 Beta-lactamase superfamily domain 34 235 1.0E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04310 56d444fe72716af74421bd87342307c1 269 PANTHER PTHR12553 1 268 3.6E-74 T 22-04-2016 TMO_RS04310 56d444fe72716af74421bd87342307c1 269 SUPERFAMILY SSF56281 1 268 1.57E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04310 56d444fe72716af74421bd87342307c1 269 Gene3D G3DSA:3.60.15.10 1 268 6.8E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04310 56d444fe72716af74421bd87342307c1 269 PANTHER PTHR12553:SF29 1 268 3.6E-74 T 22-04-2016 TMO_RS04310 56d444fe72716af74421bd87342307c1 269 SMART SM00849 23 212 0.0057 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 Pfam PF05145 Putative ammonia monooxygenase 28 350 3.1E-78 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 PIRSF PIRSF038991 1 357 3.7E-71 T 22-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 196 350 2.6E-30 T 22-04-2016 IPR017516 AbrB duplication TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 159 5.1E-33 T 22-04-2016 IPR017516 AbrB duplication TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 PANTHER PTHR38457:SF1 1 361 3.6E-44 T 22-04-2016 TMO_RS04835 616b3bf3c1efb70a7d1d4beb11dfe206 362 PANTHER PTHR38457 1 361 3.6E-44 T 22-04-2016 TMO_RS17755 a3d6e129acefe85a353fb5738ae9248f 141 SUPERFAMILY SSF55729 2 139 2.23E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17755 a3d6e129acefe85a353fb5738ae9248f 141 PANTHER PTHR23091:SF247 1 140 3.5E-21 T 22-04-2016 TMO_RS17755 a3d6e129acefe85a353fb5738ae9248f 141 PANTHER PTHR23091 1 140 3.5E-21 T 22-04-2016 TMO_RS17755 a3d6e129acefe85a353fb5738ae9248f 141 Gene3D G3DSA:3.40.630.30 2 138 1.8E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17755 a3d6e129acefe85a353fb5738ae9248f 141 Pfam PF00583 Acetyltransferase (GNAT) family 43 112 1.5E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS00755 0cd2d30fc6aa0007c5221920b2d132a0 325 PIRSF PIRSF006470 1 325 5.6E-103 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS00755 0cd2d30fc6aa0007c5221920b2d132a0 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 284 5.9E-80 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS00755 0cd2d30fc6aa0007c5221920b2d132a0 325 PANTHER PTHR33376:SF2 5 322 4.4E-91 T 22-04-2016 TMO_RS00755 0cd2d30fc6aa0007c5221920b2d132a0 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 310 5.6E-90 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS00755 0cd2d30fc6aa0007c5221920b2d132a0 325 PANTHER PTHR33376 5 322 4.4E-91 T 22-04-2016 TMO_RS06350 200d886215f89783dba05b44f609c13d 141 PANTHER PTHR30574:SF1 8 140 2.8E-24 T 22-04-2016 TMO_RS06350 200d886215f89783dba05b44f609c13d 141 PANTHER PTHR30574 8 140 2.8E-24 T 22-04-2016 TMO_RS08270 3e6129f255d1a24c5544c78b093562b2 288 PANTHER PTHR11795:SF398 1 288 1.1E-77 T 22-04-2016 TMO_RS08270 3e6129f255d1a24c5544c78b093562b2 288 PANTHER PTHR11795 1 288 1.1E-77 T 22-04-2016 TMO_RS08270 3e6129f255d1a24c5544c78b093562b2 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 272 4.9E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS17325 8dc61235015878bd5f33ed1f77712c8d 275 Gene3D G3DSA:3.40.50.150 185 203 3.2E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17325 8dc61235015878bd5f33ed1f77712c8d 275 Gene3D G3DSA:3.40.50.150 6 149 3.2E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17325 8dc61235015878bd5f33ed1f77712c8d 275 SUPERFAMILY SSF53335 190 204 7.03E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17325 8dc61235015878bd5f33ed1f77712c8d 275 SUPERFAMILY SSF53335 16 161 7.03E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 61 689 1.2E-109 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 58 689 4.4E-161 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 Gene3D G3DSA:2.170.130.10 70 180 2.1E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 PANTHER PTHR32552 1 689 1.6E-90 T 22-04-2016 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 PANTHER PTHR32552:SF27 1 689 1.6E-90 T 22-04-2016 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 Gene3D G3DSA:2.40.170.20 181 689 1.1E-90 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 176 2.7E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 Pfam PF00593 TonB dependent receptor 441 688 2.6E-36 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS06690 b3677e8d2e230db164d2a89ac6577fee 689 SUPERFAMILY SSF56935 59 689 5.86E-117 T 22-04-2016 TMO_RS07430 85a9fb690c528ffff8123e33e78e1065 267 PANTHER PTHR12151 37 261 9.8E-45 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC TMO_RS07430 85a9fb690c528ffff8123e33e78e1065 267 SUPERFAMILY SSF52833 32 192 4.55E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07430 85a9fb690c528ffff8123e33e78e1065 267 PANTHER PTHR12151:SF8 37 261 9.8E-45 T 22-04-2016 TMO_RS07430 85a9fb690c528ffff8123e33e78e1065 267 Gene3D G3DSA:3.40.30.10 34 194 2.8E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 Gene3D G3DSA:3.40.50.2020 17 223 7.5E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 18 223 5.5E-78 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 PANTHER PTHR10285 19 213 5.0E-82 T 22-04-2016 TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 Pfam PF14681 Uracil phosphoribosyltransferase 20 223 3.3E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 17 224 43.102 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 TMO_RS14095 bc9f9e267391cd326a331a416d5be2a5 224 SUPERFAMILY SSF53271 18 222 6.78E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:3.40.190.10 183 269 3.9E-13 T 22-04-2016 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 Pfam PF03466 LysR substrate binding domain 94 302 1.4E-35 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 PANTHER PTHR30419 1 301 4.8E-64 T 22-04-2016 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 SUPERFAMILY SSF46785 5 116 4.97E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:3.40.190.10 99 182 6.7E-13 T 22-04-2016 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 PANTHER PTHR30419:SF10 1 301 4.8E-64 T 22-04-2016 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 4 303 3.5E-121 T 22-04-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 Gene3D G3DSA:1.10.10.10 5 83 8.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS12245 4eef1afb4f6c2063a7e6752718e82c26 328 SUPERFAMILY SSF53850 98 306 2.02E-36 T 22-04-2016 TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 PANTHER PTHR30483 1 376 5.1E-136 T 22-04-2016 TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 Gene3D G3DSA:3.40.50.2300 23 154 3.0E-41 T 22-04-2016 TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 Gene3D G3DSA:3.40.50.2300 308 359 3.0E-41 T 22-04-2016 TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 SUPERFAMILY SSF53822 28 394 6.73E-74 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 Pfam PF13458 Periplasmic binding protein 28 371 8.6E-60 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 PANTHER PTHR30483:SF9 1 376 5.1E-136 T 22-04-2016 TMO_RS10130 ae35d75f4594184c19ad9714f4544576 398 Gene3D G3DSA:3.40.50.2300 166 307 3.6E-13 T 22-04-2016 TMO_RS16165 9cd24a0acefe20fb5a547837a1077c7d 171 Pfam PF00583 Acetyltransferase (GNAT) family 59 151 1.2E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS16165 9cd24a0acefe20fb5a547837a1077c7d 171 PANTHER PTHR36449 1 164 7.1E-38 T 22-04-2016 TMO_RS16165 9cd24a0acefe20fb5a547837a1077c7d 171 SUPERFAMILY SSF55729 67 163 1.58E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16165 9cd24a0acefe20fb5a547837a1077c7d 171 Gene3D G3DSA:3.40.630.30 46 156 5.1E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 509 8.4E-59 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 Pfam PF00474 Sodium:solute symporter family 391 509 1.4E-18 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 Pfam PF00474 Sodium:solute symporter family 67 327 1.6E-39 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 PANTHER PTHR11819:SF159 38 337 1.2E-198 T 22-04-2016 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 PANTHER PTHR11819:SF159 365 570 1.2E-198 T 22-04-2016 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 PANTHER PTHR11819 38 337 1.2E-198 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 PANTHER PTHR11819 365 570 1.2E-198 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 TMO_RS04100 1e16983c68b60dbe9edf1eda5e42f7bf 588 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 42 572 1.0E-226 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 125 139 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 176 188 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 53 62 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 153 165 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 113 125 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 244 254 5.3E-23 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PANTHER PTHR30587 52 256 1.5E-102 T 22-04-2016 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 Pfam PF00813 FliP family 57 250 2.5E-79 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 183 203 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 253 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 74 94 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 204 225 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 94 113 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 55 74 3.3E-65 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 231 243 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 183 198 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 PANTHER PTHR30587:SF0 52 256 1.5E-102 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS05620 7c0ab3a013365eae221f0023f4b572eb 256 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 57 254 1.9E-86 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 189 3.6E-21 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 Gene3D G3DSA:1.10.10.10 133 190 3.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 Pfam PF08281 Sigma-70, region 4 133 185 6.3E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 Pfam PF04542 Sigma-70 region 2 28 96 6.4E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 PANTHER PTHR30173:SF31 1 191 8.0E-40 T 22-04-2016 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 SUPERFAMILY SSF88946 6 109 1.53E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 PANTHER PTHR30173 1 191 8.0E-40 T 22-04-2016 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 SUPERFAMILY SSF88659 132 190 2.83E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS14625 c18073a69100be89972977834f5cfc8c 191 Gene3D G3DSA:1.10.1740.10 6 117 5.4E-25 T 22-04-2016 TMO_RS06450 79da55282ba57558afdc9a316d2857d8 293 PANTHER PTHR30477 6 275 2.0E-53 T 22-04-2016 TMO_RS06450 79da55282ba57558afdc9a316d2857d8 293 SUPERFAMILY SSF81345 12 269 3.92E-18 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS06450 79da55282ba57558afdc9a316d2857d8 293 PANTHER PTHR30477:SF3 6 275 2.0E-53 T 22-04-2016 TMO_RS06450 79da55282ba57558afdc9a316d2857d8 293 Pfam PF00950 ABC 3 transport family 12 270 2.0E-44 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 Pfam PF02445 Quinolinate synthetase A protein 39 328 1.4E-111 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 37 330 7.5E-93 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 PANTHER PTHR30573:SF0 1 331 5.1E-132 T 22-04-2016 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 PANTHER PTHR30573 1 331 5.1E-132 T 22-04-2016 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 Hamap MF_00568 Quinolinate synthase A [nadA]. 34 330 43.567 T 22-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 TMO_RS09555 7bd746378969ffe5acca8bf122a6904b 331 SUPERFAMILY SSF142754 37 329 7.32E-108 T 22-04-2016 TMO_RS11785 634496f66fa701f6e6a47b21491511f4 143 PIRSF PIRSF032025 1 143 8.9E-50 T 22-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 TMO_RS11785 634496f66fa701f6e6a47b21491511f4 143 Pfam PF07370 Protein of unknown function (DUF1489) 5 143 1.0E-47 T 22-04-2016 IPR008320 Uncharacterised conserved protein UCP032025 TMO_RS29360 128326d6ad37b99378cf35b91f96536a 229 Pfam PF03591 AzlC protein 9 152 1.3E-22 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease TMO_RS14380 97f700d83be9f0ae25013e4675b9a70d 293 Gene3D G3DSA:3.20.20.60 5 284 5.3E-67 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS14380 97f700d83be9f0ae25013e4675b9a70d 293 PANTHER PTHR21631 6 181 2.1E-55 T 22-04-2016 TMO_RS14380 97f700d83be9f0ae25013e4675b9a70d 293 SUPERFAMILY SSF51621 4 265 3.72E-67 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS14380 97f700d83be9f0ae25013e4675b9a70d 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 225 3.3E-47 T 22-04-2016 TMO_RS29465 82323fe8da48be4f214d8b25befa650b 115 Pfam PF01627 Hpt domain 30 102 1.0E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS29465 82323fe8da48be4f214d8b25befa650b 115 SUPERFAMILY SSF47226 3 112 6.67E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS29465 82323fe8da48be4f214d8b25befa650b 115 Gene3D G3DSA:1.20.120.160 4 112 1.7E-16 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:3.10.450.50 40 81 2.8E-8 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:3.10.450.50 137 193 2.8E-8 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 Pfam PF05494 MlaC protein 48 219 9.9E-50 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:1.10.10.640 82 121 2.2E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 Gene3D G3DSA:1.10.10.640 194 227 2.2E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical TMO_RS04155 0ae75ddc1aa11c5acdee58755adde34e 230 PANTHER PTHR36573 10 225 5.4E-28 T 22-04-2016 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 488 1.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 Gene3D G3DSA:3.30.565.10 329 492 3.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 151 1.3E-14 T 22-04-2016 IPR029095 NarX-like, N-terminal TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 SMART SM00387 374 489 1.0E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 SUPERFAMILY SSF55874 317 489 2.78E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PANTHER PTHR24423 241 493 2.2E-59 T 22-04-2016 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 Gene3D G3DSA:1.10.287.130 254 323 4.2E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 PANTHER PTHR24423:SF479 241 493 2.2E-59 T 22-04-2016 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 SMART SM00388 262 327 1.6E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS10835 7be415a402f8756c245f4a653d981a26 506 SUPERFAMILY SSF47384 247 327 3.14E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS14475 c7640261ebd9bb2dde11a818c6e0fb27 261 Pfam PF01551 Peptidase family M23 163 258 3.1E-29 T 22-04-2016 IPR016047 Peptidase M23 TMO_RS14475 c7640261ebd9bb2dde11a818c6e0fb27 261 PANTHER PTHR21666 138 261 2.9E-41 T 22-04-2016 TMO_RS14475 c7640261ebd9bb2dde11a818c6e0fb27 261 Gene3D G3DSA:2.70.70.10 131 260 5.6E-43 T 22-04-2016 TMO_RS14475 c7640261ebd9bb2dde11a818c6e0fb27 261 SUPERFAMILY SSF51261 68 260 3.92E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 Pfam PF00484 Carbonic anhydrase 44 201 1.4E-48 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 PANTHER PTHR11002:SF7 8 196 1.5E-68 T 22-04-2016 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 SUPERFAMILY SSF53056 5 214 7.59E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 93 113 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 Gene3D G3DSA:3.40.1050.10 8 213 1.8E-68 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 PANTHER PTHR11002 8 196 1.5E-68 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS16635 03c44abe370010f7a0c78ba1ea308de2 215 SMART SM00947 36 206 1.9E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 TMO_RS03270 7a34499965a065ebef034bd1dfe73ba5 348 Gene3D G3DSA:3.90.1200.10 118 318 3.7E-31 T 22-04-2016 TMO_RS03270 7a34499965a065ebef034bd1dfe73ba5 348 SUPERFAMILY SSF56112 15 329 2.19E-55 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS03270 7a34499965a065ebef034bd1dfe73ba5 348 Pfam PF01636 Phosphotransferase enzyme family 38 289 6.3E-46 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase TMO_RS03270 7a34499965a065ebef034bd1dfe73ba5 348 PANTHER PTHR12725:SF80 67 200 1.6E-15 T 22-04-2016 TMO_RS03270 7a34499965a065ebef034bd1dfe73ba5 348 PANTHER PTHR12725 67 200 1.6E-15 T 22-04-2016 TMO_RS11730 ac4e655383b66a192c491ee9e09105e0 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 23 51 1.2E-6 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS11730 ac4e655383b66a192c491ee9e09105e0 83 SUPERFAMILY SSF143120 4 52 8.89E-11 T 22-04-2016 TMO_RS11730 ac4e655383b66a192c491ee9e09105e0 83 Gene3D G3DSA:3.40.1620.10 2 49 1.4E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS11730 ac4e655383b66a192c491ee9e09105e0 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 52 9.0E-11 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS15945 0b43d4727e2d526c7a8fb345b9edbdb9 145 PANTHER PTHR41522 7 145 4.9E-25 T 22-04-2016 TMO_RS15945 0b43d4727e2d526c7a8fb345b9edbdb9 145 Pfam PF06262 Zinicin-like metallopeptidase 45 143 9.4E-34 T 22-04-2016 IPR010428 Zinicin-like metallopeptidase TMO_RS15945 0b43d4727e2d526c7a8fb345b9edbdb9 145 SUPERFAMILY SSF55486 16 143 3.19E-33 T 22-04-2016 TMO_RS17760 b702b116c2d1178b77f9b260a27ecfd8 82 Gene3D G3DSA:3.30.110.40 2 75 5.0E-15 T 22-04-2016 IPR001455 TusA-like domain TMO_RS17760 b702b116c2d1178b77f9b260a27ecfd8 82 SUPERFAMILY SSF64307 5 68 5.49E-13 T 22-04-2016 IPR001455 TusA-like domain TMO_RS17760 b702b116c2d1178b77f9b260a27ecfd8 82 Pfam PF01206 Sulfurtransferase TusA 9 77 2.8E-13 T 22-04-2016 IPR001455 TusA-like domain TMO_RS05075 773eb86bdc964d37fe1fdf6e5d153f65 79 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 14 72 16.0 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 TMO_RS05075 773eb86bdc964d37fe1fdf6e5d153f65 79 SUPERFAMILY SSF57716 19 69 9.27E-13 T 22-04-2016 TMO_RS05075 773eb86bdc964d37fe1fdf6e5d153f65 79 Gene3D G3DSA:3.30.50.10 19 70 2.4E-18 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 TMO_RS05075 773eb86bdc964d37fe1fdf6e5d153f65 79 Pfam PF03884 Domain of unknown function (DUF329) 19 68 8.0E-15 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 TMO_RS04815 8f48aa5328cb4944613106681c95c28c 317 PANTHER PTHR34383:SF3 81 305 1.4E-90 T 22-04-2016 TMO_RS04815 8f48aa5328cb4944613106681c95c28c 317 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 81 292 3.7E-75 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related TMO_RS04815 8f48aa5328cb4944613106681c95c28c 317 Gene3D G3DSA:3.40.50.300 64 295 6.4E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04815 8f48aa5328cb4944613106681c95c28c 317 PANTHER PTHR34383 81 305 1.4E-90 T 22-04-2016 TMO_RS04815 8f48aa5328cb4944613106681c95c28c 317 SUPERFAMILY SSF52540 106 291 8.82E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PIRSF PIRSF039144 1 112 1.1E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 Gene3D G3DSA:3.30.70.120 1 112 6.2E-54 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 83 103 8.1E-46 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 52 75 8.1E-46 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 2 17 8.1E-46 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PRINTS PR00340 P-II protein signature 23 41 8.1E-46 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 SUPERFAMILY SSF54913 1 112 1.5E-48 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 SMART SM00938 4 105 9.5E-71 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 TMO_RS10035 8d9a381c899fcba2bd7679910a4118f2 112 PANTHER PTHR30115 1 112 5.9E-70 T 22-04-2016 TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 Gene3D G3DSA:3.30.450.40 103 277 4.6E-42 T 22-04-2016 IPR029016 GAF domain-like TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 PANTHER PTHR30136 28 279 2.2E-48 T 22-04-2016 TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 Gene3D G3DSA:1.10.10.10 23 98 1.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 SUPERFAMILY SSF46785 29 99 3.56E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 Pfam PF01614 Bacterial transcriptional regulator 153 274 3.5E-22 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 Pfam PF09339 IclR helix-turn-helix domain 31 82 7.8E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 SUPERFAMILY SSF55781 87 276 2.03E-35 T 22-04-2016 IPR029016 GAF domain-like TMO_RS14385 971aaab8434e3b837239be2aa6949864 283 SMART SM00346 29 119 2.9E-21 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 100 109 5.6E-8 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 91 99 5.6E-8 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 5.6E-8 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 138 2.5E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 PANTHER PTHR30266 1 142 8.6E-48 T 22-04-2016 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 PANTHER PTHR30266:SF2 1 142 8.6E-48 T 22-04-2016 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 141 25.816 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 SUPERFAMILY SSF81330 13 134 1.02E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS06725 437c51f95c4cbb1ec33e0553af8ff311 146 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 137 9.5E-41 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 TMO_RS01195 d9585019de16718df69ed8972598b967 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 15 191 1.4E-17 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS01195 d9585019de16718df69ed8972598b967 209 Gene3D G3DSA:3.40.50.1110 11 203 1.6E-39 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS01195 d9585019de16718df69ed8972598b967 209 SUPERFAMILY SSF52266 10 199 2.5E-36 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain TMO_RS12645 fd86461e83b6bcdf2f8e88c499b27374 321 Gene3D G3DSA:3.40.50.1820 38 319 1.3E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS12645 fd86461e83b6bcdf2f8e88c499b27374 321 PANTHER PTHR10992 232 321 3.6E-24 T 22-04-2016 TMO_RS12645 fd86461e83b6bcdf2f8e88c499b27374 321 PANTHER PTHR10992 17 216 3.6E-24 T 22-04-2016 TMO_RS12645 fd86461e83b6bcdf2f8e88c499b27374 321 SUPERFAMILY SSF53474 25 319 2.18E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS12645 fd86461e83b6bcdf2f8e88c499b27374 321 Pfam PF12697 Alpha/beta hydrolase family 53 313 1.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 Gene3D G3DSA:3.40.50.300 1274 1413 4.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 Gene3D G3DSA:3.40.50.300 922 938 4.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 Gene3D G3DSA:3.40.50.300 1 166 4.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937:SF261 1 288 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937:SF261 856 1141 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937:SF261 605 739 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937:SF261 331 532 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937:SF261 1165 1413 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 SUPERFAMILY SSF75553 586 744 4.32E-6 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1412 20.104 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 Pfam PF02463 RecF/RecN/SMC N terminal domain 5 1403 1.3E-56 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937 1 288 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937 856 1141 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937 605 739 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937 331 532 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 PANTHER PTHR18937 1165 1413 6.1E-209 T 22-04-2016 TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 SUPERFAMILY SSF52540 1206 1411 4.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13900 b695d30aa4f7768670efdc66af8a3ff7 1418 SUPERFAMILY SSF52540 1 210 4.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 PANTHER PTHR33711 5 193 1.7E-51 T 22-04-2016 TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 194 3.2E-61 T 22-04-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 PANTHER PTHR33711:SF2 5 193 1.7E-51 T 22-04-2016 TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 Gene3D G3DSA:2.60.130.10 4 193 6.5E-56 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 SUPERFAMILY SSF49482 4 194 1.19E-45 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 TMO_RS12230 834bbfb03bc7c68c91209ba86862b338 194 Pfam PF00775 Dioxygenase 41 111 1.7E-9 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 PANTHER PTHR24220:SF132 304 414 1.8E-161 T 22-04-2016 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 PANTHER PTHR24220:SF132 7 288 1.8E-161 T 22-04-2016 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 532 1.6E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 269 5.7E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF00005 ABC transporter 305 454 7.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Pfam PF00005 ABC transporter 26 183 2.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 PANTHER PTHR24220 304 414 1.8E-161 T 22-04-2016 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 PANTHER PTHR24220 7 288 1.8E-161 T 22-04-2016 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Gene3D G3DSA:3.40.50.300 5 257 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 Gene3D G3DSA:3.40.50.300 276 528 1.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 SMART SM00382 34 233 3.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 SMART SM00382 313 504 9.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 SUPERFAMILY SSF52540 278 526 6.32E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14365 13382ee11a5c4404c8f9d7bf788ad765 555 SUPERFAMILY SSF52540 5 254 1.63E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 129 251 9.42E-27 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 1 121 2.3E-24 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 250 3.6E-33 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 372 1.6E-32 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 SMART SM00480 17 369 8.4E-125 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 SUPERFAMILY SSF55979 252 373 3.4E-34 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Gene3D G3DSA:3.10.150.10 129 255 4.4E-37 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 PIRSF PIRSF000804 1 373 2.9E-118 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Gene3D G3DSA:3.10.150.10 256 373 3.8E-35 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 PANTHER PTHR30478 2 373 4.3E-124 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Gene3D G3DSA:3.10.150.10 1 121 3.0E-30 T 22-04-2016 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 121 2.3E-29 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS00010 78f2f76266b2c6d30545c5d07b4857dc 373 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 372 1.3E-87 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 136 147 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 Gene3D G3DSA:3.30.70.20 37 153 8.1E-15 T 22-04-2016 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 Pfam PF13187 4Fe-4S dicluster domain 92 149 2.4E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 PANTHER PTHR11615:SF38 4 192 7.2E-33 T 22-04-2016 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 SUPERFAMILY SSF54862 19 158 2.76E-40 T 22-04-2016 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 Gene3D G3DSA:2.20.25.90 162 191 3.1E-7 T 22-04-2016 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 93 104 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 SMART SM00929 27 67 8.3E-20 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 27 66 6.8E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 164 190 1.3E-5 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 TMO_RS28470 1f0f2b303935ad4b8f4a681e1b8ea455 192 PANTHER PTHR11615 4 192 7.2E-33 T 22-04-2016 TMO_RS05325 8121a36060d056779b3d3c2423636c77 305 PANTHER PTHR42194 3 255 3.2E-28 T 22-04-2016 TMO_RS05325 8121a36060d056779b3d3c2423636c77 305 SUPERFAMILY SSF51658 85 260 4.42E-8 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS05325 8121a36060d056779b3d3c2423636c77 305 Pfam PF05114 Protein of unknown function (DUF692) 8 259 2.4E-44 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 TMO_RS05325 8121a36060d056779b3d3c2423636c77 305 PANTHER PTHR42194:SF1 3 255 3.2E-28 T 22-04-2016 TMO_RS05325 8121a36060d056779b3d3c2423636c77 305 Gene3D G3DSA:3.20.20.150 6 291 2.7E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 Gene3D G3DSA:3.90.650.10 186 359 2.8E-67 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 166 2.3E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 18 360 45.45 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 SUPERFAMILY SSF56042 185 356 1.5E-57 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 PANTHER PTHR10520:SF10 20 366 7.4E-204 T 22-04-2016 TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 20 349 1.7E-132 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 Pfam PF02769 AIR synthase related protein, C-terminal domain 189 355 8.2E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 PANTHER PTHR10520 20 366 7.4E-204 T 22-04-2016 TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 Gene3D G3DSA:3.30.1330.10 33 181 7.5E-62 T 22-04-2016 IPR016188 PurM-like, N-terminal domain TMO_RS09255 17839b9640dd45da5c38df5a82ed1e9c 374 SUPERFAMILY SSF55326 19 181 1.21E-49 T 22-04-2016 TMO_RS16160 3a9f1240704633b3aa4567b361d8c995 101 Pfam PF08681 Protein of unknown function (DUF1778) 18 95 1.0E-24 T 22-04-2016 IPR014795 Vibrio phage ICP1, Orf50 TMO_RS16160 3a9f1240704633b3aa4567b361d8c995 101 SUPERFAMILY SSF47598 17 92 3.72E-22 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 TMO_RS16160 3a9f1240704633b3aa4567b361d8c995 101 PANTHER PTHR35401 17 95 1.1E-20 T 22-04-2016 TMO_RS16160 3a9f1240704633b3aa4567b361d8c995 101 PANTHER PTHR35401:SF2 17 95 1.1E-20 T 22-04-2016 TMO_RS16160 3a9f1240704633b3aa4567b361d8c995 101 Gene3D G3DSA:1.20.5.780 17 98 4.9E-27 T 22-04-2016 TMO_RS15855 3476ec3a08264c158f3ffacd7994b2e7 408 Pfam PF06850 PHB de-polymerase C-terminus 204 404 5.7E-96 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal TMO_RS15855 3476ec3a08264c158f3ffacd7994b2e7 408 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 404 1.6E-184 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase TMO_RS15855 3476ec3a08264c158f3ffacd7994b2e7 408 SUPERFAMILY SSF53474 90 403 1.6E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15855 3476ec3a08264c158f3ffacd7994b2e7 408 PIRSF PIRSF020818 1 408 4.6E-192 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase TMO_RS30120 10b59722a9921a70069d4549cf4ee210 143 SUPERFAMILY SSF51905 15 142 9.55E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS30120 10b59722a9921a70069d4549cf4ee210 143 PANTHER PTHR13789:SF251 6 143 1.6E-19 T 22-04-2016 TMO_RS30120 10b59722a9921a70069d4549cf4ee210 143 Pfam PF01266 FAD dependent oxidoreductase 15 83 1.6E-6 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS30120 10b59722a9921a70069d4549cf4ee210 143 Gene3D G3DSA:3.50.50.60 17 142 7.6E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS30120 10b59722a9921a70069d4549cf4ee210 143 PANTHER PTHR13789 6 143 1.6E-19 T 22-04-2016 TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 6 105 1.8E-23 T 22-04-2016 IPR004624 PhnA protein TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 Pfam PF03831 PhnA domain 39 105 1.1E-29 T 22-04-2016 IPR013988 PhnA protein, C-terminal TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 PANTHER PTHR30305:SF3 27 105 3.7E-30 T 22-04-2016 TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 Gene3D G3DSA:2.30.30.40 37 105 2.2E-32 T 22-04-2016 TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 PANTHER PTHR30305 27 105 3.7E-30 T 22-04-2016 TMO_RS03665 91a03f232ac07613297dccf15bf6f5a7 106 SUPERFAMILY SSF82057 36 105 2.61E-25 T 22-04-2016 TMO_RS05095 bdf24eda7b3f1a027fdc1e44287447b6 370 Pfam PF09334 tRNA synthetases class I (M) 161 224 5.1E-5 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS05095 bdf24eda7b3f1a027fdc1e44287447b6 370 SUPERFAMILY SSF52374 153 216 6.68E-6 T 22-04-2016 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 SUPERFAMILY SSF51905 2 198 3.11E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 Pfam PF01266 FAD dependent oxidoreductase 4 198 2.1E-21 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 PANTHER PTHR13847 1 216 1.7E-55 T 22-04-2016 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 Gene3D G3DSA:3.50.50.60 5 14 9.3E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 Gene3D G3DSA:3.50.50.60 67 154 9.3E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS22605 109a4a204581314c1ea5bcdddddc7d7a 216 PANTHER PTHR13847:SF210 1 216 1.7E-55 T 22-04-2016 TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 Gene3D G3DSA:3.40.50.300 2 226 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 PANTHER PTHR24220 7 233 1.3E-91 T 22-04-2016 TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 SUPERFAMILY SSF52540 5 228 2.17E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 PANTHER PTHR24220:SF469 7 233 1.3E-91 T 22-04-2016 TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 Pfam PF00005 ABC transporter 21 163 5.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10120 88e4e5127da4f88745d5a31858333295 241 SMART SM00382 30 212 2.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS19575 c397cfcc3851679ba62f2969ca04a21e 273 Gene3D G3DSA:3.40.50.150 50 272 1.4E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS19575 c397cfcc3851679ba62f2969ca04a21e 273 SUPERFAMILY SSF53335 50 232 5.81E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS19575 c397cfcc3851679ba62f2969ca04a21e 273 Pfam PF08241 Methyltransferase domain 71 157 1.5E-11 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 TMO_RS19575 c397cfcc3851679ba62f2969ca04a21e 273 PANTHER PTHR13090 22 273 1.5E-85 T 22-04-2016 TMO_RS06585 ebf8366ec395eb5b91cf6abef972161b 62 Pfam PF08898 Domain of unknown function (DUF1843) 8 52 1.4E-8 T 22-04-2016 IPR014994 Domain of unknown function DUF1843 TMO_RS08170 433dde8aec58480d372a2c2189deb92f 80 PANTHER PTHR12469 3 80 1.3E-28 T 22-04-2016 TMO_RS08170 433dde8aec58480d372a2c2189deb92f 80 Gene3D G3DSA:1.10.150.250 2 79 1.2E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase TMO_RS08170 433dde8aec58480d372a2c2189deb92f 80 Pfam PF03937 Flavinator of succinate dehydrogenase 9 80 7.5E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase TMO_RS08170 433dde8aec58480d372a2c2189deb92f 80 PANTHER PTHR12469:SF2 3 80 1.3E-28 T 22-04-2016 TMO_RS08170 433dde8aec58480d372a2c2189deb92f 80 SUPERFAMILY SSF109910 3 74 8.11E-24 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase TMO_RS07075 11b8cc118711acb5c71ed9ac787c0300 347 Gene3D G3DSA:3.40.190.10 171 260 4.0E-4 T 22-04-2016 TMO_RS07075 11b8cc118711acb5c71ed9ac787c0300 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 43 324 5.9E-48 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS07075 11b8cc118711acb5c71ed9ac787c0300 347 PANTHER PTHR33376 7 344 9.8E-59 T 22-04-2016 TMO_RS07075 11b8cc118711acb5c71ed9ac787c0300 347 SUPERFAMILY SSF53850 148 286 2.99E-8 T 22-04-2016 TMO_RS03550 361ca77e6f16676b2838ec21410a88ee 446 PANTHER PTHR33362 8 445 3.7E-106 T 22-04-2016 TMO_RS03550 361ca77e6f16676b2838ec21410a88ee 446 PANTHER PTHR33362:SF5 8 445 3.7E-106 T 22-04-2016 TMO_RS03550 361ca77e6f16676b2838ec21410a88ee 446 PIRSF PIRSF006066 5 446 1.2E-86 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS03550 361ca77e6f16676b2838ec21410a88ee 446 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 442 2.0E-86 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS03550 361ca77e6f16676b2838ec21410a88ee 446 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 436 9.0E-84 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 PANTHER PTHR23501:SF28 17 391 1.7E-101 T 22-04-2016 TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 SUPERFAMILY SSF103473 13 392 7.72E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 PANTHER PTHR23501 17 391 1.7E-101 T 22-04-2016 TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 Gene3D G3DSA:1.20.1250.20 213 390 2.0E-11 T 22-04-2016 TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 Gene3D G3DSA:1.20.1250.20 21 196 3.3E-22 T 22-04-2016 TMO_RS17020 827e6b2ebae925af072fd1ae45dd30d8 404 Pfam PF07690 Major Facilitator Superfamily 25 344 4.1E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS04095 02d0ecc8712cb2fc84e1258ababc607a 105 Pfam PF02325 YGGT family 17 87 4.6E-8 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 PANTHER PTHR10366 3 318 4.0E-121 T 22-04-2016 TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 Gene3D G3DSA:3.90.25.10 181 316 1.7E-33 T 22-04-2016 TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 PANTHER PTHR10366:SF41 3 318 4.0E-121 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 Gene3D G3DSA:3.40.50.720 2 180 4.6E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 297 8.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05875 bf8b420c3ae0efbb716dcd6b3c007e31 340 SUPERFAMILY SSF51735 1 315 5.91E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 SUPERFAMILY SSF50610 480 542 1.06E-12 T 22-04-2016 IPR009004 Transposase, Mu, C-terminal TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 SUPERFAMILY SSF53098 254 470 2.73E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 Gene3D G3DSA:1.10.10.10 1 56 1.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 Pfam PF00665 Integrase core domain 252 375 6.1E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 Gene3D G3DSA:2.30.30.130 481 542 5.0E-11 T 22-04-2016 IPR009004 Transposase, Mu, C-terminal TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 Pfam PF09299 Mu transposase, C-terminal 481 539 2.2E-11 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal TMO_RS12100 80f310b90cf5938a2192813a4811ba96 705 Gene3D G3DSA:3.30.420.10 246 472 8.3E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS16725 b91092146412bddd117006e104d0825b 433 SUPERFAMILY SSF53383 7 420 2.91E-168 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16725 b91092146412bddd117006e104d0825b 433 PANTHER PTHR11680 7 427 6.2E-257 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS16725 b91092146412bddd117006e104d0825b 433 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 421 50.837 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS16725 b91092146412bddd117006e104d0825b 433 PANTHER PTHR11680:SF9 7 427 6.2E-257 T 22-04-2016 TMO_RS16725 b91092146412bddd117006e104d0825b 433 PIRSF PIRSF000412 3 425 1.2E-159 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS16725 b91092146412bddd117006e104d0825b 433 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS16725 b91092146412bddd117006e104d0825b 433 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.2E-165 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 TMO_RS16725 b91092146412bddd117006e104d0825b 433 Gene3D G3DSA:3.90.1150.10 287 421 6.2E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS16725 b91092146412bddd117006e104d0825b 433 Gene3D G3DSA:3.40.640.10 37 286 3.9E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS09205 5026e886dbd7f85727e8c2bcbe3dc6b5 312 SUPERFAMILY SSF48239 214 307 3.93E-8 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS09205 5026e886dbd7f85727e8c2bcbe3dc6b5 312 SUPERFAMILY SSF48239 11 112 3.93E-8 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS09205 5026e886dbd7f85727e8c2bcbe3dc6b5 312 Gene3D G3DSA:1.50.10.20 7 113 5.8E-7 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS06885 b62f8ce813a036526ec0b25425ae0d9a 377 SUPERFAMILY SSF50969 57 348 1.53E-19 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like TMO_RS06885 b62f8ce813a036526ec0b25425ae0d9a 377 PIRSF PIRSF028101 1 377 3.1E-88 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 TMO_RS06885 b62f8ce813a036526ec0b25425ae0d9a 377 Pfam PF07433 Protein of unknown function (DUF1513) 66 375 8.6E-100 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 TMO_RS06885 b62f8ce813a036526ec0b25425ae0d9a 377 Gene3D G3DSA:2.130.10.10 57 346 2.2E-17 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS15980 82a31472ebdc2de181c7a371c727e5e3 462 SUPERFAMILY SSF56059 36 157 1.34E-18 T 22-04-2016 TMO_RS15980 82a31472ebdc2de181c7a371c727e5e3 462 SUPERFAMILY SSF56059 288 427 1.34E-18 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 PANTHER PTHR10657:SF11 21 276 8.0E-43 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF109998 35 203 1.06E-30 T 22-04-2016 IPR027304 Trigger factor/SurA domain TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF54534 294 383 3.66E-10 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 Pfam PF00639 PPIC-type PPIASE domain 188 275 1.5E-20 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 PANTHER PTHR10657 21 276 8.0E-43 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 Gene3D G3DSA:3.10.50.40 289 403 8.7E-10 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 Gene3D G3DSA:3.10.50.40 176 281 1.2E-26 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 Pfam PF13624 SurA N-terminal domain 8 149 1.2E-17 T 22-04-2016 TMO_RS09305 683b83c7770db97af4615c6898e42c55 426 SUPERFAMILY SSF54534 178 278 3.53E-24 T 22-04-2016 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 PIRSF PIRSF002465 3 339 3.7E-119 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 PANTHER PTHR30100 3 342 4.1E-129 T 22-04-2016 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 138.383 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 Pfam PF02504 Fatty acid synthesis protein 5 327 1.2E-103 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 SUPERFAMILY SSF53659 5 335 1.64E-102 T 22-04-2016 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 PANTHER PTHR30100:SF1 3 342 4.1E-129 T 22-04-2016 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 Gene3D G3DSA:3.40.718.10 4 334 5.5E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 TMO_RS09110 65b1d9708f1eaf78c0f3f722c662e047 352 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 8.3E-97 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 Gene3D G3DSA:3.40.30.10 10 89 3.4E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 SUPERFAMILY SSF47616 81 205 1.74E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 SUPERFAMILY SSF52833 3 80 1.82E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 PANTHER PTHR11260:SF144 1 172 3.0E-41 T 22-04-2016 TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 80 7.8E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 PANTHER PTHR11260 1 172 3.0E-41 T 22-04-2016 TMO_RS15665 9387d5e7ccc2cad8e60605816177ce59 230 Gene3D G3DSA:1.20.1050.10 90 203 1.7E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS29075 95749879b8607c3056047fade9966775 160 Gene3D G3DSA:3.40.140.10 7 129 1.2E-16 T 22-04-2016 TMO_RS29075 95749879b8607c3056047fade9966775 160 SUPERFAMILY SSF102712 7 134 6.41E-18 T 22-04-2016 TMO_RS29075 95749879b8607c3056047fade9966775 160 PANTHER PTHR34858 6 126 1.7E-20 T 22-04-2016 TMO_RS29075 95749879b8607c3056047fade9966775 160 PANTHER PTHR34858:SF1 6 126 1.7E-20 T 22-04-2016 TMO_RS29075 95749879b8607c3056047fade9966775 160 SMART SM00232 6 133 0.0016 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 TMO_RS29075 95749879b8607c3056047fade9966775 160 Pfam PF14464 Prokaryotic homologs of the JAB domain 13 130 1.7E-17 T 22-04-2016 IPR028090 JAB domain, prokaryotic TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PANTHER PTHR10804:SF82 10 266 1.4E-104 T 22-04-2016 TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PANTHER PTHR10804 10 266 1.4E-104 T 22-04-2016 TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 SUPERFAMILY SSF55920 17 266 1.13E-84 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 18 261 9.6E-78 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 Hamap MF_01974 Methionine aminopeptidase [map]. 15 262 36.137 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 173 185 1.8E-19 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 80 93 1.8E-19 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 204 216 1.8E-19 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 103 119 1.8E-19 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 Pfam PF00557 Metallopeptidase family M24 25 253 1.1E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS14660 c5180a41011da1546dd6e8f25047b4b8 274 Gene3D G3DSA:3.90.230.10 17 268 1.3E-86 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS06090 7ed5cda95c27aca07da209154839eba8 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 99 4.5E-16 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD TMO_RS17395 3538dc111ce4a9e32db106cd91c111fc 231 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 14 206 3.9E-22 T 22-04-2016 TMO_RS15485 c19544706d6d6be54df5c2dc3e7ba3f3 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 32 163 4.6E-17 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS13250 4f5903488920f617c18f4a248364812c 207 SUPERFAMILY SSF52166 1 206 4.19E-70 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 TMO_RS13250 4f5903488920f617c18f4a248364812c 207 Gene3D G3DSA:3.40.1370.10 57 207 1.7E-53 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 TMO_RS13250 4f5903488920f617c18f4a248364812c 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 203 5.2E-67 T 22-04-2016 IPR013005 50S ribosomal protein uL4 TMO_RS13250 4f5903488920f617c18f4a248364812c 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 204 3.3E-61 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 TMO_RS13250 4f5903488920f617c18f4a248364812c 207 PANTHER PTHR10746 1 206 1.2E-88 T 22-04-2016 IPR013005 50S ribosomal protein uL4 TMO_RS13250 4f5903488920f617c18f4a248364812c 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 207 30.809 T 22-04-2016 IPR013005 50S ribosomal protein uL4 TMO_RS09545 701973a53f45c69a0186cc1e2455188f 320 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 300 1.6E-35 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS09545 701973a53f45c69a0186cc1e2455188f 320 SUPERFAMILY SSF161111 7 220 4.18E-40 T 22-04-2016 TMO_RS09545 701973a53f45c69a0186cc1e2455188f 320 PANTHER PTHR13414 5 284 6.7E-95 T 22-04-2016 TMO_RS09545 701973a53f45c69a0186cc1e2455188f 320 Gene3D G3DSA:1.20.1510.10 8 218 2.0E-34 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS09545 701973a53f45c69a0186cc1e2455188f 320 Pfam PF01545 Cation efflux family 12 218 1.1E-33 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 Gene3D G3DSA:2.40.50.100 99 130 6.4E-13 T 22-04-2016 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 Gene3D G3DSA:2.40.50.100 233 266 6.4E-13 T 22-04-2016 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 SUPERFAMILY SSF111369 87 344 4.18E-16 T 22-04-2016 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 86 409 4.0E-44 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 PANTHER PTHR30469 25 426 9.6E-60 T 22-04-2016 TMO_RS15115 e7bd8a1fad64fa0442ce712044de5fef 427 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 92 328 1.2E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS02145 5bf27135bc5acdbb0049961c96b7099e 118 Gene3D G3DSA:3.30.70.120 32 110 1.4E-5 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal TMO_RS02145 5bf27135bc5acdbb0049961c96b7099e 118 SUPERFAMILY SSF54913 12 112 5.0E-15 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_RS07725 f38dce4406897e6be740b04aa3701933 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 19.528 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TMO_RS07725 f38dce4406897e6be740b04aa3701933 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 2 48 2.5E-19 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 TMO_RS07725 f38dce4406897e6be740b04aa3701933 82 Pfam PF02416 mttA/Hcf106 family 3 52 1.2E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 TMO_RS06840 683372feb325f2a697c16420a2587b4d 197 Pfam PF05239 PRC-barrel domain 94 144 2.5E-6 T 22-04-2016 IPR027275 PRC-barrel domain TMO_RS06840 683372feb325f2a697c16420a2587b4d 197 SUPERFAMILY SSF50346 45 172 1.62E-9 T 22-04-2016 IPR011033 PRC-barrel-like TMO_RS06840 683372feb325f2a697c16420a2587b4d 197 Gene3D G3DSA:2.30.30.240 88 143 3.9E-7 T 22-04-2016 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 Gene3D G3DSA:1.20.210.10 10 465 3.7E-68 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 SUPERFAMILY SSF81442 10 467 6.15E-117 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 PANTHER PTHR10422:SF21 9 466 2.6E-245 T 22-04-2016 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 PANTHER PTHR10422 9 466 2.6E-245 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 444 8.5E-114 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS11475 d99ad512a01577b149bffda7cd71d659 486 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 462 8.3E-214 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 TMO_RS26110 d08203fd2c2ac7c78696bb175c963ada 345 Gene3D G3DSA:3.20.20.70 234 345 1.2E-39 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS26110 d08203fd2c2ac7c78696bb175c963ada 345 SUPERFAMILY SSF51395 234 345 3.75E-30 T 22-04-2016 TMO_RS26110 d08203fd2c2ac7c78696bb175c963ada 345 Pfam PF01070 FMN-dependent dehydrogenase 244 345 2.8E-32 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 TMO_RS26110 d08203fd2c2ac7c78696bb175c963ada 345 PANTHER PTHR10578 219 345 6.2E-47 T 22-04-2016 TMO_RS01080 8bcf6a9998ca25da23f859b8af105841 185 SUPERFAMILY SSF88874 1 179 2.22E-46 T 22-04-2016 TMO_RS01080 8bcf6a9998ca25da23f859b8af105841 185 Pfam PF07484 Phage Tail Collar Domain 6 62 1.7E-24 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS01080 8bcf6a9998ca25da23f859b8af105841 185 Gene3D G3DSA:3.90.1340.10 1 67 5.0E-29 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS01080 8bcf6a9998ca25da23f859b8af105841 185 PANTHER PTHR34720 1 185 7.2E-47 T 22-04-2016 TMO_RS12470 514b14c4ff122e5293ea7c7d0a7dda8b 157 PANTHER PTHR34584 1 148 1.7E-15 T 22-04-2016 TMO_RS12470 514b14c4ff122e5293ea7c7d0a7dda8b 157 Pfam PF01899 Na+/H+ ion antiporter subunit 8 137 2.5E-26 T 22-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PANTHER PTHR30483 1 410 4.8E-140 T 22-04-2016 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 Pfam PF13433 Periplasmic binding protein domain 35 397 6.9E-144 T 22-04-2016 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 SUPERFAMILY SSF53822 34 397 3.13E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 Gene3D G3DSA:3.40.50.2300 155 304 2.2E-21 T 22-04-2016 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 263 281 2.4E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 2.4E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 57 73 2.4E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 76 94 2.4E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 Gene3D G3DSA:3.40.50.2300 30 154 2.6E-52 T 22-04-2016 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 Gene3D G3DSA:3.40.50.2300 305 360 2.6E-52 T 22-04-2016 TMO_RS02555 a8423b878372cead4555ec59a47f4f8f 417 PANTHER PTHR30483:SF8 1 410 4.8E-140 T 22-04-2016 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 SUPERFAMILY SSF51735 105 293 2.32E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 SUPERFAMILY SSF52283 5 139 3.4E-39 T 22-04-2016 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 Gene3D G3DSA:3.40.50.720 5 119 2.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 180 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 PANTHER PTHR10996 4 324 1.3E-124 T 22-04-2016 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 6.6E-59 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 18 323 4.5E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site TMO_RS17885 7918fe9216b9d1b81ebc66afa9979cc4 326 Gene3D G3DSA:3.40.50.720 120 295 1.3E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00525 e2d35bc869a9670add27fa0836a20fc4 303 PANTHER PTHR10120 1 299 6.7E-106 T 22-04-2016 TMO_RS00525 e2d35bc869a9670add27fa0836a20fc4 303 Gene3D G3DSA:3.30.2010.10 56 146 1.3E-35 T 22-04-2016 TMO_RS00525 e2d35bc869a9670add27fa0836a20fc4 303 PANTHER PTHR10120:SF19 1 299 6.7E-106 T 22-04-2016 TMO_RS00525 e2d35bc869a9670add27fa0836a20fc4 303 Pfam PF01435 Peptidase family M48 65 280 2.3E-40 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 TMO_RS00525 e2d35bc869a9670add27fa0836a20fc4 303 Hamap MF_00188 Protease HtpX [htpX]. 3 280 28.606 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 PANTHER PTHR10992 9 268 2.5E-40 T 22-04-2016 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 Pfam PF00561 alpha/beta hydrolase fold 24 140 2.8E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 1.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 1.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 Gene3D G3DSA:3.40.50.1820 3 268 4.3E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS14465 20ceb0c5b3aad7d42634ee708d7361fd 270 SUPERFAMILY SSF53474 6 266 1.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 Pfam PF00107 Zinc-binding dehydrogenase 167 260 2.0E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 Gene3D G3DSA:3.40.50.720 150 310 7.1E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF51735 133 308 9.03E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 Pfam PF16884 N-terminal domain of oxidoreductase 9 111 4.4E-33 T 22-04-2016 TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 Gene3D G3DSA:3.90.180.10 5 149 5.1E-49 T 22-04-2016 IPR011032 GroES-like TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 PANTHER PTHR11695:SF528 26 344 1.2E-103 T 22-04-2016 TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF50129 293 342 6.83E-5 T 22-04-2016 IPR011032 GroES-like TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 SMART SM00829 21 341 4.7E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 SUPERFAMILY SSF50129 7 150 1.0E-34 T 22-04-2016 IPR011032 GroES-like TMO_RS03740 239ccb5403b5fbcd7609198a0d8a9dfd 344 PANTHER PTHR11695 26 344 1.2E-103 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS17895 672f4627f5b510cdd194cf71a72ee3b2 151 Pfam PF02635 DsrE/DsrF-like family 21 149 5.1E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein TMO_RS17895 672f4627f5b510cdd194cf71a72ee3b2 151 SUPERFAMILY SSF75169 10 52 1.33E-11 T 22-04-2016 IPR027396 DsrEFH-like TMO_RS17895 672f4627f5b510cdd194cf71a72ee3b2 151 SUPERFAMILY SSF75169 91 142 1.33E-11 T 22-04-2016 IPR027396 DsrEFH-like TMO_RS17895 672f4627f5b510cdd194cf71a72ee3b2 151 Gene3D G3DSA:3.40.1260.10 7 128 2.8E-14 T 22-04-2016 IPR027396 DsrEFH-like TMO_RS02140 c132b92cf81a6022d7a93373352f85e0 824 PANTHER PTHR38344:SF1 11 820 9.3E-199 T 22-04-2016 TMO_RS02140 c132b92cf81a6022d7a93373352f85e0 824 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 11 777 1.0E-241 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 TMO_RS02140 c132b92cf81a6022d7a93373352f85e0 824 Hamap MF_01871 UPF0753 protein . 6 792 22.531 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 TMO_RS02140 c132b92cf81a6022d7a93373352f85e0 824 PANTHER PTHR38344 11 820 9.3E-199 T 22-04-2016 TMO_RS06500 04e7179108c1af5f12606cf55271d879 327 PANTHER PTHR32196 17 326 1.8E-80 T 22-04-2016 TMO_RS06500 04e7179108c1af5f12606cf55271d879 327 PANTHER PTHR32196:SF21 17 326 1.8E-80 T 22-04-2016 TMO_RS06500 04e7179108c1af5f12606cf55271d879 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 316 7.2E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS01680 a59ab7eeb01d39538ed507e94c78fd83 290 PANTHER PTHR11795 1 290 1.6E-54 T 22-04-2016 TMO_RS01680 a59ab7eeb01d39538ed507e94c78fd83 290 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 275 6.8E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS01250 1414974efc73e83cc1809222fd990716 190 PANTHER PTHR35011 2 173 7.0E-64 T 22-04-2016 TMO_RS01250 1414974efc73e83cc1809222fd990716 190 PANTHER PTHR35011:SF1 2 173 7.0E-64 T 22-04-2016 TMO_RS01250 1414974efc73e83cc1809222fd990716 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 151 4.5E-30 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 PANTHER PTHR11019:SF81 135 294 1.6E-65 T 22-04-2016 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 PANTHER PTHR11019:SF81 44 119 1.6E-65 T 22-04-2016 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 Gene3D G3DSA:1.10.10.60 186 240 2.0E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 SUPERFAMILY SSF46689 239 290 2.37E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 174 1.3E-43 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 SUPERFAMILY SSF46689 187 237 5.67E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 PANTHER PTHR11019 135 294 1.6E-65 T 22-04-2016 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 PANTHER PTHR11019 44 119 1.6E-65 T 22-04-2016 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 Pfam PF12833 Helix-turn-helix domain 209 283 3.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 Gene3D G3DSA:1.10.10.60 241 282 5.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12550 b2c2c2fdae7d6582f4c7a96d553fae65 309 SMART SM00342 203 286 8.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14375 ab0cb042060975b25331ec60f8d608fc 169 PANTHER PTHR11670:SF41 6 164 2.5E-17 T 22-04-2016 TMO_RS14375 ab0cb042060975b25331ec60f8d608fc 169 PANTHER PTHR11670 6 164 2.5E-17 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14375 ab0cb042060975b25331ec60f8d608fc 169 Gene3D G3DSA:3.20.19.10 39 135 3.1E-9 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS14375 ab0cb042060975b25331ec60f8d608fc 169 SUPERFAMILY SSF52016 11 164 1.75E-19 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 Pfam PF12501 Phosphate ATP-binding cassette transporter 7 178 4.1E-36 T 22-04-2016 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 PANTHER PTHR30425:SF3 156 460 3.5E-101 T 22-04-2016 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 PANTHER PTHR30425 156 460 3.5E-101 T 22-04-2016 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 Gene3D G3DSA:1.10.3720.10 165 457 2.1E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 162 455 6.6E-84 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 247 456 1.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17650 3200a1f77cee9a1673f96179bfbded4f 460 SUPERFAMILY SSF161098 201 447 2.49E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04545 fef117e37a3d2383b6edf3dc40318d38 465 Gene3D G3DSA:3.90.1300.10 2 462 1.5E-121 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS04545 fef117e37a3d2383b6edf3dc40318d38 465 PANTHER PTHR11895 1 462 7.5E-125 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS04545 fef117e37a3d2383b6edf3dc40318d38 465 SUPERFAMILY SSF75304 3 462 1.57E-121 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS04545 fef117e37a3d2383b6edf3dc40318d38 465 Pfam PF01425 Amidase 25 445 4.1E-89 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 Gene3D G3DSA:3.40.605.10 405 446 2.3E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 Gene3D G3DSA:3.40.605.10 30 254 2.3E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 353 374 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 PANTHER PTHR11063:SF8 36 447 6.2E-169 T 22-04-2016 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 43 436 2.3E-133 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 35 446 39.897 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 SUPERFAMILY SSF53720 36 445 1.22E-113 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 Pfam PF00171 Aldehyde dehydrogenase family 28 311 3.9E-13 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 Gene3D G3DSA:3.40.309.10 257 404 2.2E-36 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 PIRSF PIRSF000151 29 447 2.4E-169 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 TMO_RS14965 6b5edcdd98b1a68b20d0f230caa96b27 447 PANTHER PTHR11063 36 447 6.2E-169 T 22-04-2016 TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 PANTHER PTHR24220 18 245 4.7E-91 T 22-04-2016 TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 SUPERFAMILY SSF52540 15 238 6.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 SMART SM00382 41 222 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 Gene3D G3DSA:3.40.50.300 15 237 1.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 Pfam PF00005 ABC transporter 32 173 9.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 PANTHER PTHR24220:SF568 18 245 4.7E-91 T 22-04-2016 TMO_RS10735 21353c8d8a62481218e79728d0d836e0 245 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10530 38f0c2cc1d65a4a1a0200768365ec5fd 237 Pfam PF06299 Protein of unknown function (DUF1045) 66 227 1.2E-50 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 TMO_RS10530 38f0c2cc1d65a4a1a0200768365ec5fd 237 PIRSF PIRSF033328 5 236 4.9E-50 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 TMO_RS02320 925b474c7119403c2eaa43729600fcbf 115 Pfam PF02211 Nitrile hydratase beta subunit 43 114 5.5E-9 T 22-04-2016 IPR024690 Nitrile hydratase beta subunit domain GO:0018822 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02320 925b474c7119403c2eaa43729600fcbf 115 SUPERFAMILY SSF50090 40 114 2.2E-19 T 22-04-2016 IPR008990 Electron transport accessory protein-like domain TMO_RS02320 925b474c7119403c2eaa43729600fcbf 115 TIGRFAM TIGR03889 nitrile_acc: nitrile hydratase accessory protein 48 115 2.0E-25 T 22-04-2016 IPR023808 Nitrile hydratase accessory protein, putative TMO_RS02320 925b474c7119403c2eaa43729600fcbf 115 Gene3D G3DSA:1.10.472.20 42 114 4.6E-15 T 22-04-2016 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PANTHER PTHR30009 473 664 2.2E-267 T 22-04-2016 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PANTHER PTHR30009 1 417 2.2E-267 T 22-04-2016 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 649 2.9E-198 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PANTHER PTHR30009:SF0 473 664 2.2E-267 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PANTHER PTHR30009:SF0 1 417 2.2E-267 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 639 652 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.5E-62 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 Pfam PF01578 Cytochrome C assembly protein 89 295 1.9E-57 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 2.1E-95 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 TMO_RS15530 5aeaffe7c6f66866f4b2f63e697c47b5 671 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 646 2.5E-113 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal TMO_RS06070 bbd92ab2d63cec531471d82392ae6b24 153 Gene3D G3DSA:3.40.50.980 14 125 4.3E-13 T 22-04-2016 TMO_RS06070 bbd92ab2d63cec531471d82392ae6b24 153 Pfam PF00501 AMP-binding enzyme 15 123 5.2E-13 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS06070 bbd92ab2d63cec531471d82392ae6b24 153 SUPERFAMILY SSF56801 5 139 1.83E-19 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF10385 RNA polymerase beta subunit external 1 domain 599 664 2.7E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF00562 RNA polymerase Rpb2, domain 6 726 1282 1.7E-165 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856 1201 1362 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856 1052 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856 5 237 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856 348 733 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856 749 936 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04560 RNA polymerase Rpb2, domain 7 1285 1359 3.0E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.50.150 1064 1078 2.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.50.150 833 943 2.9E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.50.100 723 798 1.9E-30 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1361 12.464 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04565 RNA polymerase Rpb2, domain 3 521 589 4.6E-32 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 365 462 1.5E-19 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 229 1.0E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1358 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.270.10 799 826 5.4E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.40.270.10 1079 1261 5.4E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1110.10 354 452 8.2E-72 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1110.10 159 236 8.2E-72 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:2.30.150.10 600 664 1.0E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 667 721 1.1E-150 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 453 599 1.1E-150 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Gene3D G3DSA:3.90.1100.10 19 157 1.1E-150 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856:SF20 1201 1362 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856:SF20 1052 1147 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856:SF20 5 237 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856:SF20 348 733 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 PANTHER PTHR20856:SF20 749 936 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 Pfam PF04563 RNA polymerase beta subunit 27 505 7.9E-31 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 SUPERFAMILY SSF64484 1058 1361 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 SUPERFAMILY SSF64484 11 232 0.0 T 22-04-2016 TMO_RS13290 ee11385402bdd413ecf7e04305c6b810 1362 SUPERFAMILY SSF64484 351 945 0.0 T 22-04-2016 TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 PANTHER PTHR11941 1 254 3.2E-132 T 22-04-2016 TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 PANTHER PTHR11941:SF54 1 254 3.2E-132 T 22-04-2016 TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 SUPERFAMILY SSF52096 1 257 1.45E-92 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.7E-91 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS17945 7a85b167aa197ee9e246260dc7e159bb 257 Gene3D G3DSA:3.90.226.10 1 255 4.5E-102 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 SUPERFAMILY SSF46689 2 74 8.98E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 SUPERFAMILY SSF48498 73 165 5.78E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 PANTHER PTHR30328 2 155 1.8E-17 T 22-04-2016 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 3.3E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 Pfam PF13305 WHG domain 83 146 1.2E-5 T 22-04-2016 IPR025996 WHG domain TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 PANTHER PTHR30328:SF6 2 155 1.8E-17 T 22-04-2016 TMO_RS07280 3859e1f020ee60a7f9c205566af0fedc 191 Gene3D G3DSA:1.10.357.10 2 161 5.7E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PANTHER PTHR33164:SF4 28 188 1.9E-32 T 22-04-2016 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 Gene3D G3DSA:1.10.10.10 38 187 2.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 SUPERFAMILY SSF46785 41 187 8.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PANTHER PTHR33164 28 188 1.9E-32 T 22-04-2016 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 Pfam PF01047 MarR family 81 140 8.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 SMART SM00347 72 175 2.1E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 165 185 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 151 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS14345 cb2e99b6434e52f1901e487b0c232123 196 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 131 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 Pfam PF00589 Phage integrase family 215 392 4.8E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 Gene3D G3DSA:1.10.443.10 216 395 1.5E-17 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 PANTHER PTHR30629 1 435 7.9E-173 T 22-04-2016 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 Gene3D G3DSA:1.10.150.130 100 198 6.2E-12 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal TMO_RS04090 7602c68580e094881a93dce637d6b856 645 Pfam PF13356 Domain of unknown function (DUF4102) 7 88 2.5E-16 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 SUPERFAMILY SSF56349 100 402 4.71E-47 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 TMO_RS04090 7602c68580e094881a93dce637d6b856 645 PANTHER PTHR30629:SF4 1 435 7.9E-173 T 22-04-2016 TMO_RS17380 c6c6e1a8c6aa02fcc99f106eb84a3334 454 Pfam PF07690 Major Facilitator Superfamily 35 303 1.8E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS17380 c6c6e1a8c6aa02fcc99f106eb84a3334 454 SUPERFAMILY SSF103473 31 452 1.44E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS17380 c6c6e1a8c6aa02fcc99f106eb84a3334 454 PANTHER PTHR12778 29 443 1.1E-103 T 22-04-2016 TMO_RS17380 c6c6e1a8c6aa02fcc99f106eb84a3334 454 Gene3D G3DSA:1.20.1250.20 28 221 2.6E-12 T 22-04-2016 TMO_RS17380 c6c6e1a8c6aa02fcc99f106eb84a3334 454 Gene3D G3DSA:1.20.1250.20 266 449 3.1E-11 T 22-04-2016 TMO_RS03465 96063dfef65070d979a740c7bfe6b75a 143 SUPERFAMILY SSF51182 19 138 6.61E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS03465 96063dfef65070d979a740c7bfe6b75a 143 Pfam PF07883 Cupin domain 72 132 3.0E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel TMO_RS03465 96063dfef65070d979a740c7bfe6b75a 143 Gene3D G3DSA:2.60.120.10 23 141 3.9E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 839 9.9E-141 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 6 1083 13.538 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Pfam PF14579 Helix-hairpin-helix motif 780 875 2.2E-13 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 PANTHER PTHR32294 2 1038 0.0 T 22-04-2016 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 PANTHER PTHR32294:SF4 2 1038 0.0 T 22-04-2016 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 284 706 4.3E-142 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS09695 4c9f3cbca1b0fe78f2a289f023265ee7 1083 SMART SM00481 7 74 1.1E-6 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 TMO_RS05790 877e4e701e771163ba230bf73b9ccf6c 323 Gene3D G3DSA:2.40.100.10 191 310 1.2E-6 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS05790 877e4e701e771163ba230bf73b9ccf6c 323 SMART SM00797 24 314 1.5E-122 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_RS05790 877e4e701e771163ba230bf73b9ccf6c 323 SUPERFAMILY SSF50891 178 303 3.03E-9 T 22-04-2016 IPR029000 Cyclophilin-like domain TMO_RS05790 877e4e701e771163ba230bf73b9ccf6c 323 Pfam PF02626 Allophanate hydrolase subunit 2 25 297 2.7E-83 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_RS05790 877e4e701e771163ba230bf73b9ccf6c 323 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 2 320 1.0E-78 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B TMO_RS09640 af1410f84788c42e574767402c583a78 431 PRINTS PR00812 Bacterial general secretion pathway protein F signature 394 408 4.3E-6 T 22-04-2016 IPR003004 GspF/PilC family TMO_RS09640 af1410f84788c42e574767402c583a78 431 PRINTS PR00812 Bacterial general secretion pathway protein F signature 194 222 4.3E-6 T 22-04-2016 IPR003004 GspF/PilC family TMO_RS09640 af1410f84788c42e574767402c583a78 431 Pfam PF00482 Type II secretion system (T2SS), protein F 300 414 9.4E-13 T 22-04-2016 IPR018076 Type II secretion system F domain TMO_RS09640 af1410f84788c42e574767402c583a78 431 Pfam PF00482 Type II secretion system (T2SS), protein F 105 222 4.4E-13 T 22-04-2016 IPR018076 Type II secretion system F domain TMO_RS09640 af1410f84788c42e574767402c583a78 431 PANTHER PTHR30012:SF0 25 430 7.8E-39 T 22-04-2016 TMO_RS09640 af1410f84788c42e574767402c583a78 431 PANTHER PTHR30012 25 430 7.8E-39 T 22-04-2016 TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 SUPERFAMILY SSF52980 19 129 1.23E-16 T 22-04-2016 IPR011335 Restriction endonuclease type II-like TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Pfam PF02021 Uncharacterised protein family UPF0102 24 116 7.7E-18 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Gene3D G3DSA:3.40.1350.10 24 131 3.4E-22 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 PANTHER PTHR34039:SF1 13 133 3.0E-22 T 22-04-2016 TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 PANTHER PTHR34039 13 133 3.0E-22 T 22-04-2016 TMO_RS17455 28dd39c4fd8fec7f9aca1892a6aaad3d 134 Hamap MF_00048 UPF0102 protein YraN [yraN]. 17 129 17.187 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 TMO_RS21515 fe3a4d5015e725f932f3d0e733b0242e 218 PANTHER PTHR36837 4 218 1.2E-26 T 22-04-2016 TMO_RS21515 fe3a4d5015e725f932f3d0e733b0242e 218 SUPERFAMILY SSF53474 4 187 1.69E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS21515 fe3a4d5015e725f932f3d0e733b0242e 218 Gene3D G3DSA:3.40.50.1820 4 147 3.1E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PANTHER PTHR11444 15 363 2.2E-87 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PANTHER PTHR11444:SF21 15 363 2.2E-87 T 22-04-2016 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 Gene3D G3DSA:1.20.200.10 111 364 5.1E-71 T 22-04-2016 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 SUPERFAMILY SSF48557 15 367 2.04E-80 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 Gene3D G3DSA:1.10.275.10 14 110 8.6E-23 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS12225 f58313594af03129b1354d0ff783770c 399 Pfam PF00206 Lyase 33 306 6.0E-40 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 1.8E-20 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 1.8E-20 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 1.8E-20 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.8E-20 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.7E-8 T 22-04-2016 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 1.7E-8 T 22-04-2016 TMO_RS12225 f58313594af03129b1354d0ff783770c 399 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 1.7E-8 T 22-04-2016 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 Gene3D G3DSA:1.10.10.60 296 342 1.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 Pfam PF12833 Helix-turn-helix domain 265 340 8.1E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 PANTHER PTHR11019 250 347 5.6E-22 T 22-04-2016 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 PANTHER PTHR11019:SF52 250 347 5.6E-22 T 22-04-2016 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 SMART SM00342 258 339 1.5E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS04205 b62771fef370937785381db0b04ca3d8 354 SUPERFAMILY SSF46689 296 341 4.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 238 258 4.1E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 SUPERFAMILY SSF52540 14 257 4.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 PANTHER PTHR24220 17 261 3.9E-109 T 22-04-2016 TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 Pfam PF00005 ABC transporter 32 187 1.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 Gene3D G3DSA:3.40.50.300 13 260 2.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 PANTHER PTHR24220:SF491 17 261 3.9E-109 T 22-04-2016 TMO_RS10125 ecb0887ecdb5dd0fe1737442d8430b21 265 SMART SM00382 40 237 1.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 Gene3D G3DSA:3.40.50.1820 3 270 4.0E-73 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 1.2E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 SUPERFAMILY SSF53474 4 269 3.36E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 Pfam PF12697 Alpha/beta hydrolase family 21 261 2.6E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS10105 ee2e99621e79e0e5892b26a9b8abc116 271 PANTHER PTHR10992 5 271 4.6E-30 T 22-04-2016 TMO_RS03175 f6282fd94943d5386722c9c1ffbe81f1 64 Pfam PF13617 YnbE-like lipoprotein 8 61 1.2E-25 T 22-04-2016 IPR025985 YnbE-like lipoprotein TMO_RS03175 f6282fd94943d5386722c9c1ffbe81f1 64 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 20 64 5.0E-11 T 22-04-2016 TMO_RS06205 3cd11cb4fd699af3a3ea787109726917 316 PANTHER PTHR30294 285 315 6.5E-49 T 22-04-2016 TMO_RS06205 3cd11cb4fd699af3a3ea787109726917 316 PANTHER PTHR30294 2 260 6.5E-49 T 22-04-2016 TMO_RS06205 3cd11cb4fd699af3a3ea787109726917 316 PANTHER PTHR30294:SF20 285 315 6.5E-49 T 22-04-2016 TMO_RS06205 3cd11cb4fd699af3a3ea787109726917 316 PANTHER PTHR30294:SF20 2 260 6.5E-49 T 22-04-2016 TMO_RS06205 3cd11cb4fd699af3a3ea787109726917 316 Pfam PF12679 ABC-2 family transporter protein 12 313 6.7E-38 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 TMO_RS09480 5637cea26e19e8969aeb5a555dba602f 241 Pfam PF09976 Tetratricopeptide repeat-like domain 22 195 1.5E-14 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain TMO_RS01750 810b0e6f75b4b79ec98a3e8b12993f20 299 PANTHER PTHR36838:SF2 1 295 4.6E-71 T 22-04-2016 TMO_RS01750 810b0e6f75b4b79ec98a3e8b12993f20 299 PANTHER PTHR36838 1 295 4.6E-71 T 22-04-2016 TMO_RS01750 810b0e6f75b4b79ec98a3e8b12993f20 299 Pfam PF03547 Membrane transport protein 151 286 1.8E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 TMO_RS01750 810b0e6f75b4b79ec98a3e8b12993f20 299 Pfam PF03547 Membrane transport protein 6 139 3.3E-7 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 PIRSF PIRSF004848 1 225 4.4E-60 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 SUPERFAMILY SSF51419 1 218 4.45E-71 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 Gene3D G3DSA:3.20.20.10 1 223 1.3E-78 T 22-04-2016 IPR029066 PLP-binding barrel TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 Pfam PF01168 Alanine racemase, N-terminal domain 7 220 1.2E-23 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 PANTHER PTHR10146 3 224 1.6E-89 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS17275 62ed43bc8d06b4979fdaec6940b049ef 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 220 1.2E-50 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 TMO_RS13070 ecea124dd9aacc3e10971d30aa04b380 158 Pfam PF11157 Protein of unknown function (DUF2937) 68 155 6.7E-16 T 22-04-2016 IPR022584 Protein of unknown function DUF2937 TMO_RS06310 6b6a0e6a26513eff05b7c1939c41c8af 272 SUPERFAMILY SSF110857 91 202 5.62E-9 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like TMO_RS06310 6b6a0e6a26513eff05b7c1939c41c8af 272 PANTHER PTHR12192:SF9 92 256 5.1E-41 T 22-04-2016 TMO_RS06310 6b6a0e6a26513eff05b7c1939c41c8af 272 PANTHER PTHR12192 92 256 5.1E-41 T 22-04-2016 IPR006840 ChaC-like protein TMO_RS06310 6b6a0e6a26513eff05b7c1939c41c8af 272 Pfam PF04752 ChaC-like protein 92 256 6.8E-36 T 22-04-2016 IPR006840 ChaC-like protein TMO_RS06310 6b6a0e6a26513eff05b7c1939c41c8af 272 Gene3D G3DSA:3.10.490.10 92 248 6.1E-22 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like TMO_RS03775 31ec4ba6253080a8c286df1e84f7f0cb 399 SUPERFAMILY SSF53187 125 374 1.15E-47 T 22-04-2016 TMO_RS03775 31ec4ba6253080a8c286df1e84f7f0cb 399 PANTHER PTHR12756 12 295 5.8E-74 T 22-04-2016 TMO_RS03775 31ec4ba6253080a8c286df1e84f7f0cb 399 Gene3D G3DSA:3.40.630.10 121 359 2.4E-31 T 22-04-2016 TMO_RS03775 31ec4ba6253080a8c286df1e84f7f0cb 399 Pfam PF00246 Zinc carboxypeptidase 149 250 1.1E-13 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 TMO_RS03775 31ec4ba6253080a8c286df1e84f7f0cb 399 PANTHER PTHR12756:SF18 12 295 5.8E-74 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 SUPERFAMILY SSF55154 8 213 3.71E-19 T 22-04-2016 IPR033469 CYTH-like domain TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 Pfam PF05235 CHAD domain 240 516 9.9E-47 T 22-04-2016 IPR007899 CHAD domain TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 SMART SM01118 3 210 2.9E-7 T 22-04-2016 IPR023577 CYTH domain TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339 9 284 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339 303 391 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339 418 534 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339:SF1 9 284 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339:SF1 303 391 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 PANTHER PTHR39339:SF1 418 534 4.0E-12 T 22-04-2016 TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 Gene3D G3DSA:2.40.320.10 3 215 3.5E-14 T 22-04-2016 IPR023577 CYTH domain TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 SMART SM00880 239 551 4.7E-65 T 22-04-2016 IPR007899 CHAD domain TMO_RS13725 ab8645dfb1ea24c007dd5b1720d1eb63 563 Pfam PF01928 CYTH domain 8 178 2.3E-8 T 22-04-2016 IPR023577 CYTH domain TMO_RS07640 0f7dc925df33c7f0c27ade7afb887fb8 123 Gene3D G3DSA:3.90.330.10 17 71 3.5E-10 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07640 0f7dc925df33c7f0c27ade7afb887fb8 123 Pfam PF02979 Nitrile hydratase, alpha chain 21 71 4.5E-7 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07640 0f7dc925df33c7f0c27ade7afb887fb8 123 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 17 71 0.003 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07640 0f7dc925df33c7f0c27ade7afb887fb8 123 SUPERFAMILY SSF56209 14 95 3.01E-16 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07640 0f7dc925df33c7f0c27ade7afb887fb8 123 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 20 94 4.1E-18 T 22-04-2016 IPR022513 Thiazole/oxazole-modified microcins TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 Pfam PF01614 Bacterial transcriptional regulator 143 266 6.4E-14 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 SUPERFAMILY SSF55781 92 268 6.15E-40 T 22-04-2016 IPR029016 GAF domain-like TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 Gene3D G3DSA:3.30.450.40 96 268 7.7E-39 T 22-04-2016 IPR029016 GAF domain-like TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 PANTHER PTHR30136 1 266 4.3E-100 T 22-04-2016 TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 PANTHER PTHR30136:SF4 1 266 4.3E-100 T 22-04-2016 TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 Pfam PF09339 IclR helix-turn-helix domain 27 77 2.4E-17 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 SMART SM00346 25 115 3.4E-25 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 Gene3D G3DSA:1.10.10.10 19 95 1.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10500 2afb6b948dc5a6be55a0660b6360edff 271 SUPERFAMILY SSF46785 25 97 1.57E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07045 885e2687c99e178c82c5571b642e4006 397 PANTHER PTHR30188 53 396 1.5E-119 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 TMO_RS07045 885e2687c99e178c82c5571b642e4006 397 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 151 393 3.5E-71 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria TMO_RS07045 885e2687c99e178c82c5571b642e4006 397 PANTHER PTHR30188:SF3 53 396 1.5E-119 T 22-04-2016 TMO_RS07045 885e2687c99e178c82c5571b642e4006 397 Pfam PF02405 Permease MlaE 181 391 8.2E-73 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 PANTHER PTHR11935:SF110 20 297 1.2E-120 T 22-04-2016 TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 Gene3D G3DSA:3.60.15.10 22 266 3.4E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 SUPERFAMILY SSF56281 23 302 2.57E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 Pfam PF00753 Metallo-beta-lactamase superfamily 39 219 6.8E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 SMART SM00849 29 219 7.3E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS06360 410da4678de2e9a821d020ba036b970d 302 PANTHER PTHR11935 20 297 1.2E-120 T 22-04-2016 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 SUPERFAMILY SSF53649 4 482 1.44E-96 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 Gene3D G3DSA:3.30.1120.10 423 489 8.8E-11 T 22-04-2016 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 Pfam PF00884 Sulfatase 3 372 2.2E-53 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 PANTHER PTHR10342 260 497 1.8E-83 T 22-04-2016 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 PANTHER PTHR10342 3 224 1.8E-83 T 22-04-2016 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 Gene3D G3DSA:3.40.720.10 3 390 5.5E-77 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 Pfam PF16347 Domain of unknown function (DUF4976) 375 481 2.1E-7 T 22-04-2016 IPR032506 Domain of unknown function DUF4976 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 PANTHER PTHR10342:SF207 260 497 1.8E-83 T 22-04-2016 TMO_RS16250 cb2b9048da9cda3f934cf3c06f56879f 501 PANTHER PTHR10342:SF207 3 224 1.8E-83 T 22-04-2016 TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 SUPERFAMILY SSF52540 4 274 2.24E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 Pfam PF00685 Sulfotransferase domain 5 272 1.6E-27 T 22-04-2016 IPR000863 Sulfotransferase domain GO:0008146 TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 Gene3D G3DSA:3.40.50.300 5 273 2.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 PANTHER PTHR11783 5 58 1.4E-16 T 22-04-2016 TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 PANTHER PTHR11783 82 260 1.4E-16 T 22-04-2016 TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 PANTHER PTHR11783:SF15 5 58 1.4E-16 T 22-04-2016 TMO_RS17260 3e9fb90e8fc1e67ac7fd2331f6e98fbe 299 PANTHER PTHR11783:SF15 82 260 1.4E-16 T 22-04-2016 TMO_RS10165 91a1e3de59e470446d89bd1dc100fd29 396 SUPERFAMILY SSF53756 2 376 5.5E-47 T 22-04-2016 TMO_RS10165 91a1e3de59e470446d89bd1dc100fd29 396 Pfam PF00534 Glycosyl transferases group 1 236 357 1.8E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS10165 91a1e3de59e470446d89bd1dc100fd29 396 Gene3D G3DSA:3.40.50.2000 185 358 2.7E-25 T 22-04-2016 TMO_RS10165 91a1e3de59e470446d89bd1dc100fd29 396 PANTHER PTHR12526:SF397 1 380 3.6E-33 T 22-04-2016 TMO_RS10165 91a1e3de59e470446d89bd1dc100fd29 396 PANTHER PTHR12526 1 380 3.6E-33 T 22-04-2016 TMO_RS04660 972b4fc5a154121660b105d99b6fac67 383 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 310 1.6E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS04660 972b4fc5a154121660b105d99b6fac67 383 PANTHER PTHR30482:SF2 329 380 1.9E-61 T 22-04-2016 TMO_RS04660 972b4fc5a154121660b105d99b6fac67 383 PANTHER PTHR30482:SF2 2 303 1.9E-61 T 22-04-2016 TMO_RS04660 972b4fc5a154121660b105d99b6fac67 383 PANTHER PTHR30482 329 380 1.9E-61 T 22-04-2016 TMO_RS04660 972b4fc5a154121660b105d99b6fac67 383 PANTHER PTHR30482 2 303 1.9E-61 T 22-04-2016 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 SUPERFAMILY SSF53098 3 169 4.83E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 PANTHER PTHR30231:SF0 2 168 1.3E-72 T 22-04-2016 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 SMART SM00479 2 172 9.8E-50 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 224 8.3E-81 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 170 3.9E-49 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 PANTHER PTHR30231 2 168 1.3E-72 T 22-04-2016 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 Gene3D G3DSA:3.30.420.10 2 171 6.3E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS17125 d12b6b6bbe559724f48c188fdd533fd4 228 Pfam PF00929 Exonuclease 4 163 1.8E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III TMO_RS13975 317bb1d265195243a1698538923c1248 281 Gene3D G3DSA:3.40.1010.10 2 110 2.8E-32 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 TMO_RS13975 317bb1d265195243a1698538923c1248 281 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 249 1.2E-97 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 TMO_RS13975 317bb1d265195243a1698538923c1248 281 SUPERFAMILY SSF53790 2 247 5.89E-64 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13975 317bb1d265195243a1698538923c1248 281 PANTHER PTHR21091 1 223 1.6E-62 T 22-04-2016 TMO_RS13975 317bb1d265195243a1698538923c1248 281 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 TMO_RS13975 317bb1d265195243a1698538923c1248 281 PANTHER PTHR21091:SF17 1 223 1.6E-62 T 22-04-2016 TMO_RS13975 317bb1d265195243a1698538923c1248 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 6.6E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 TMO_RS13975 317bb1d265195243a1698538923c1248 281 Gene3D G3DSA:3.30.950.10 111 230 5.2E-37 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 SMART SM00342 20 103 1.5E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 SMART SM00871 135 285 4.6E-24 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 Gene3D G3DSA:1.10.10.60 57 105 4.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 Gene3D G3DSA:1.10.10.60 4 56 1.6E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 Gene3D G3DSA:3.20.80.10 134 285 9.5E-24 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 Pfam PF14526 Integron-associated effector binding protein 152 284 6.7E-20 T 22-04-2016 IPR029441 Integron-associated effector binding protein TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF46689 5 50 9.41E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 57 99 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 PANTHER PTHR11019 6 111 1.9E-26 T 22-04-2016 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF46689 56 105 4.17E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 SUPERFAMILY SSF55136 133 284 4.97E-24 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 87 103 9.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 72 87 9.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 TMO_RS01130 31c0b818e043a444eef3072ea708e634 286 Pfam PF12833 Helix-turn-helix domain 26 104 1.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS14395 1aefbeb3e7f4620c685a4ca2480cc2cd 63 Pfam PF13711 Domain of unknown function (DUF4160) 1 58 2.2E-11 T 22-04-2016 IPR025427 Protein of unknown function DUF4160 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 SUPERFAMILY SSF53800 8 274 2.07E-60 T 22-04-2016 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 PANTHER PTHR33542:SF2 8 307 1.4E-73 T 22-04-2016 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 Pfam PF01903 CbiX 15 129 2.9E-24 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 Pfam PF01903 CbiX 163 266 3.4E-19 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 PANTHER PTHR33542 8 307 1.4E-73 T 22-04-2016 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 Gene3D G3DSA:3.40.50.1400 155 275 1.2E-21 T 22-04-2016 TMO_RS14000 e5e60bb20af89b62e99d84e3c2c6b7de 385 Gene3D G3DSA:3.40.50.1400 8 141 1.5E-25 T 22-04-2016 TMO_RS14435 51b4e85566d7a3486599580992646a78 218 PANTHER PTHR30614 1 218 8.4E-80 T 22-04-2016 TMO_RS14435 51b4e85566d7a3486599580992646a78 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 2.0E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS14435 51b4e85566d7a3486599580992646a78 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 212 5.2E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14435 51b4e85566d7a3486599580992646a78 218 Gene3D G3DSA:1.10.3720.10 11 212 6.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14435 51b4e85566d7a3486599580992646a78 218 SUPERFAMILY SSF161098 11 198 1.23E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS20985 761656fe206056144b07a8f38877fa2d 86 SUPERFAMILY SSF51604 1 86 5.58E-10 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS20985 761656fe206056144b07a8f38877fa2d 86 Gene3D G3DSA:3.20.20.120 1 86 7.0E-11 T 22-04-2016 IPR029065 Enolase C-terminal domain-like TMO_RS15320 4985364dca304f751507668103b479bf 352 Gene3D G3DSA:3.90.25.10 197 304 3.3E-9 T 22-04-2016 TMO_RS15320 4985364dca304f751507668103b479bf 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 236 2.3E-30 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS15320 4985364dca304f751507668103b479bf 352 Gene3D G3DSA:3.40.50.720 1 196 1.2E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15320 4985364dca304f751507668103b479bf 352 SUPERFAMILY SSF51735 1 326 1.78E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15320 4985364dca304f751507668103b479bf 352 PANTHER PTHR10366:SF12 2 333 2.1E-59 T 22-04-2016 TMO_RS15320 4985364dca304f751507668103b479bf 352 PANTHER PTHR10366 2 333 2.1E-59 T 22-04-2016 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 Gene3D G3DSA:2.30.30.100 216 259 2.1E-6 T 22-04-2016 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 Gene3D G3DSA:3.30.930.10 11 212 2.8E-48 T 22-04-2016 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 Pfam PF03099 Biotin/lipoate A/B protein ligase family 30 151 4.2E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 17 260 1.3E-42 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 SUPERFAMILY SSF50037 218 261 1.79E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 SUPERFAMILY SSF55681 13 212 2.06E-43 T 22-04-2016 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 PANTHER PTHR12835 17 261 2.6E-54 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 TMO_RS09875 a2fe46c776cc8b5a0514344abcd2f5fd 270 Pfam PF02237 Biotin protein ligase C terminal domain 216 261 6.5E-6 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 Pfam PF00999 Sodium/hydrogen exchanger family 7 419 4.8E-58 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 PANTHER PTHR10110:SF120 1 542 7.0E-160 T 22-04-2016 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 PANTHER PTHR10110 1 542 7.0E-160 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 543 4.8E-111 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 7.9E-6 T 22-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 7.9E-6 T 22-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 TMO_RS12215 10eaff89413f1ce706b7d005b6b5b448 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 7.9E-6 T 22-04-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: REACT_15518 TMO_RS09345 8ece8b835bc7dc7d1ca27821299e740e 292 SUPERFAMILY SSF53807 32 276 2.16E-33 T 22-04-2016 TMO_RS09345 8ece8b835bc7dc7d1ca27821299e740e 292 Pfam PF01497 Periplasmic binding protein 35 247 3.5E-17 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS09345 8ece8b835bc7dc7d1ca27821299e740e 292 Gene3D G3DSA:3.40.50.1980 32 151 2.1E-13 T 22-04-2016 TMO_RS09345 8ece8b835bc7dc7d1ca27821299e740e 292 Gene3D G3DSA:3.40.50.1980 163 277 2.4E-7 T 22-04-2016 TMO_RS11835 f310d64db2140b9aa7606e5cf272ba47 485 Gene3D G3DSA:3.40.630.30 265 417 3.3E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS11835 f310d64db2140b9aa7606e5cf272ba47 485 SUPERFAMILY SSF55729 258 423 1.71E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 PANTHER PTHR11920 162 447 5.9E-53 T 22-04-2016 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 PANTHER PTHR11920 76 95 5.9E-53 T 22-04-2016 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 SUPERFAMILY SSF55073 237 425 4.4E-57 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 PANTHER PTHR11920:SF257 162 447 5.9E-53 T 22-04-2016 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 PANTHER PTHR11920:SF257 76 95 5.9E-53 T 22-04-2016 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 SMART SM00044 193 405 1.3E-24 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 242 419 3.1E-34 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS01030 134c46d5c2116bf0b048dc3edaa8679f 468 Gene3D G3DSA:3.30.70.1230 242 424 2.3E-42 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:1.10.287.90 11 88 1.8E-11 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 PANTHER PTHR22888 8 237 5.7E-77 T 22-04-2016 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:1.10.760.10 226 307 4.7E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 Gene3D G3DSA:2.60.40.420 91 225 2.2E-43 T 22-04-2016 IPR008972 Cupredoxin TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF46626 208 314 1.49E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 15 206 3.6E-50 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF49503 93 244 7.52E-45 T 22-04-2016 IPR008972 Cupredoxin TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 Pfam PF00034 Cytochrome c 216 307 7.0E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 142 190 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 124 191 4.1E-17 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 SUPERFAMILY SSF81464 11 94 1.42E-9 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 TMO_RS07435 3215be6c2f164b73c0140546fe32bb25 316 PANTHER PTHR22888:SF2 8 237 5.7E-77 T 22-04-2016 TMO_RS02500 24bc84e8af0128fc4a3559ae3ba07dda 144 Gene3D G3DSA:3.10.129.10 9 144 1.1E-27 T 22-04-2016 IPR029069 HotDog domain TMO_RS02500 24bc84e8af0128fc4a3559ae3ba07dda 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 122 3.4E-12 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS02500 24bc84e8af0128fc4a3559ae3ba07dda 144 PANTHER PTHR12418 22 121 1.3E-16 T 22-04-2016 TMO_RS02500 24bc84e8af0128fc4a3559ae3ba07dda 144 SUPERFAMILY SSF54637 4 140 2.91E-26 T 22-04-2016 IPR029069 HotDog domain TMO_RS02500 24bc84e8af0128fc4a3559ae3ba07dda 144 Pfam PF03061 Thioesterase superfamily 53 125 1.0E-9 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS09325 123bfd3599504321bf84bbb195549857 224 Pfam PF00625 Guanylate kinase 22 200 6.7E-51 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_RS09325 123bfd3599504321bf84bbb195549857 224 SUPERFAMILY SSF52540 18 204 4.27E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09325 123bfd3599504321bf84bbb195549857 224 PANTHER PTHR23117:SF13 17 209 4.6E-85 T 22-04-2016 TMO_RS09325 123bfd3599504321bf84bbb195549857 224 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 21 199 4.6E-70 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TMO_RS09325 123bfd3599504321bf84bbb195549857 224 SMART SM00072 19 202 2.5E-56 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit TMO_RS09325 123bfd3599504321bf84bbb195549857 224 Gene3D G3DSA:3.40.50.300 18 42 9.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09325 123bfd3599504321bf84bbb195549857 224 Gene3D G3DSA:3.40.50.300 102 207 9.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09325 123bfd3599504321bf84bbb195549857 224 Gene3D G3DSA:3.30.63.10 50 101 6.1E-26 T 22-04-2016 TMO_RS09325 123bfd3599504321bf84bbb195549857 224 PANTHER PTHR23117 17 209 4.6E-85 T 22-04-2016 TMO_RS09325 123bfd3599504321bf84bbb195549857 224 ProSitePatterns PS00856 Guanylate kinase-like signature. 54 71 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TMO_RS09325 123bfd3599504321bf84bbb195549857 224 Hamap MF_00328 Guanylate kinase [gmk]. 18 202 35.179 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 Gene3D G3DSA:3.40.47.10 238 370 2.2E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 Gene3D G3DSA:3.40.47.10 148 176 2.2E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 Gene3D G3DSA:3.40.47.10 18 106 1.1E-15 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 Gene3D G3DSA:3.40.47.10 187 219 1.1E-15 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 PIRSF PIRSF000429 1 376 3.3E-14 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 PANTHER PTHR18919:SF108 1 379 5.3E-142 T 22-04-2016 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 SUPERFAMILY SSF53901 5 219 1.98E-20 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 SUPERFAMILY SSF53901 247 370 4.87E-15 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 TMO_RS03505 6862c9bd4425a538e400584526ca16c5 381 PANTHER PTHR18919 1 379 5.3E-142 T 22-04-2016 TMO_RS12815 2413085b5667057b5d00088f51085f57 270 PANTHER PTHR30294 34 270 2.8E-17 T 22-04-2016 TMO_RS12815 2413085b5667057b5d00088f51085f57 270 Pfam PF01061 ABC-2 type transporter 30 229 2.5E-14 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 TMO_RS01390 fe781a31ccff768e08a4661c7e0734e5 325 Gene3D G3DSA:1.10.3720.10 91 318 8.4E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01390 fe781a31ccff768e08a4661c7e0734e5 325 PANTHER PTHR30465 1 323 1.7E-116 T 22-04-2016 TMO_RS01390 fe781a31ccff768e08a4661c7e0734e5 325 SUPERFAMILY SSF161098 94 307 2.62E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01390 fe781a31ccff768e08a4661c7e0734e5 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 322 2.2E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01390 fe781a31ccff768e08a4661c7e0734e5 325 PANTHER PTHR30465:SF0 1 323 1.7E-116 T 22-04-2016 TMO_RS25690 017ffb2f4b13a1229855ae34ba4f41f8 235 SUPERFAMILY SSF51126 55 235 7.53E-28 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS25690 017ffb2f4b13a1229855ae34ba4f41f8 235 Pfam PF12951 Passenger-associated-transport-repeat 132 160 3.9E-10 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat TMO_RS25690 017ffb2f4b13a1229855ae34ba4f41f8 235 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 131 160 8.0E-12 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat TMO_RS25690 017ffb2f4b13a1229855ae34ba4f41f8 235 Gene3D G3DSA:2.160.20.20 58 235 3.3E-11 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 SUPERFAMILY SSF53474 233 537 1.37E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 111 283 1.9E-79 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 PANTHER PTHR36837:SF2 25 599 7.3E-240 T 22-04-2016 TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 68 597 2.0E-243 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 PANTHER PTHR36837 25 599 7.3E-240 T 22-04-2016 TMO_RS09780 8b7279eed32e73d4bd81878021373812 600 Gene3D G3DSA:3.40.50.1820 217 570 1.0E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS06595 bb80a3f2787dd69454b1652aeae4ae2a 67 Pfam PF08898 Domain of unknown function (DUF1843) 15 58 7.1E-10 T 22-04-2016 IPR014994 Domain of unknown function DUF1843 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 SUPERFAMILY SSF53774 2 281 3.53E-56 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 Gene3D G3DSA:3.40.50.40 180 280 1.1E-19 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PIRSF PIRSF001220 1 281 3.4E-41 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 Pfam PF00710 Asparaginase, N-terminal 2 168 1.1E-31 T 22-04-2016 IPR027474 L-asparaginase, N-terminal TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 3.0E-8 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 229 247 3.0E-8 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PRINTS PR00139 Asparaginase/glutaminase family signature 74 92 3.0E-8 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 SMART SM00870 2 281 7.1E-32 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 Gene3D G3DSA:3.40.50.1170 2 168 2.7E-34 T 22-04-2016 IPR027474 L-asparaginase, N-terminal TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PANTHER PTHR11707 1 278 1.4E-36 T 22-04-2016 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PIRSF PIRSF500176 1 281 2.2E-49 T 22-04-2016 TMO_RS04485 5cb83ca500e0320e78ab60126cf81edb 281 PANTHER PTHR11707:SF3 1 278 1.4E-36 T 22-04-2016 TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 536 2.9E-225 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 SUPERFAMILY SSF52317 289 540 1.01E-77 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 Pfam PF06418 CTP synthase N-terminus 3 264 2.1E-119 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 SUPERFAMILY SSF52540 1 266 2.82E-117 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 Hamap MF_01227 CTP synthase [pyrG]. 2 541 50.63 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 Gene3D G3DSA:3.40.50.880 288 541 6.8E-93 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 Pfam PF00117 Glutamine amidotransferase class-I 301 535 3.8E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 Gene3D G3DSA:3.40.50.300 1 284 7.9E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08785 cba7ef4171c94bc95079a9fe5983c532 544 PANTHER PTHR11550 1 540 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 Pfam PF01207 Dihydrouridine synthase (Dus) 1 309 1.5E-79 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 PANTHER PTHR11082 1 299 3.0E-139 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 PIRSF PIRSF006621 1 310 1.1E-72 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 SUPERFAMILY SSF51395 1 293 6.11E-70 T 22-04-2016 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 312 47.002 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 5.3E-127 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 PANTHER PTHR11082:SF29 1 299 3.0E-139 T 22-04-2016 TMO_RS10270 0ac2d9781942e61c0b85455341cff99e 318 Gene3D G3DSA:3.20.20.70 1 239 3.3E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 PANTHER PTHR11496 1 391 4.4E-128 T 22-04-2016 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 SUPERFAMILY SSF56796 8 391 1.96E-117 T 22-04-2016 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 16 383 1.1E-116 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 Gene3D G3DSA:1.20.1090.10 189 392 1.3E-62 T 22-04-2016 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 PANTHER PTHR11496:SF68 1 391 4.4E-128 T 22-04-2016 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 Gene3D G3DSA:3.40.50.1970 9 188 4.8E-53 T 22-04-2016 TMO_RS02790 6a371645e72912763aac60d474c7778d 392 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 TMO_RS14915 33e4cc4407ce84275520aa046da1fc6e 207 Pfam PF01810 LysE type translocator 27 199 1.0E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS14915 33e4cc4407ce84275520aa046da1fc6e 207 PANTHER PTHR30086:SF12 13 206 2.3E-22 T 22-04-2016 TMO_RS14915 33e4cc4407ce84275520aa046da1fc6e 207 PANTHER PTHR30086 13 206 2.3E-22 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 306 3.8E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 52 372 1.0E-46 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:2.40.50.100 195 226 6.7E-15 T 22-04-2016 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 Gene3D G3DSA:2.40.50.100 74 106 6.7E-15 T 22-04-2016 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 PANTHER PTHR30572:SF3 8 361 2.4E-68 T 22-04-2016 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 PANTHER PTHR30572 8 361 2.4E-68 T 22-04-2016 TMO_RS04810 dd5d476f8dbe7f7b18df7cbeafaea2d5 402 SUPERFAMILY SSF111369 62 251 3.4E-21 T 22-04-2016 TMO_RS14090 a09740c07b3e4a3647175fe3dd9fc99d 151 Pfam PF00075 RNase H 10 146 1.4E-50 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 TMO_RS14090 a09740c07b3e4a3647175fe3dd9fc99d 151 PANTHER PTHR10642 5 147 5.5E-60 T 22-04-2016 TMO_RS14090 a09740c07b3e4a3647175fe3dd9fc99d 151 SUPERFAMILY SSF53098 9 147 2.78E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS14090 a09740c07b3e4a3647175fe3dd9fc99d 151 Gene3D G3DSA:3.30.420.10 9 148 4.9E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS14090 a09740c07b3e4a3647175fe3dd9fc99d 151 Hamap MF_00042 Ribonuclease H [rnhA]. 8 151 33.312 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 PANTHER PTHR30346:SF13 1 293 2.4E-117 T 22-04-2016 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.0E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 SUPERFAMILY SSF53850 90 297 1.21E-41 T 22-04-2016 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Pfam PF03466 LysR substrate binding domain 89 294 1.8E-43 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 PANTHER PTHR30346 1 293 2.4E-117 T 22-04-2016 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 SUPERFAMILY SSF46785 2 112 2.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Gene3D G3DSA:1.10.10.10 2 82 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Gene3D G3DSA:3.40.190.10 173 268 4.2E-32 T 22-04-2016 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Gene3D G3DSA:3.40.190.10 282 296 6.9E-18 T 22-04-2016 TMO_RS05815 a56114af6dbd293c7cb485c6c4545220 304 Gene3D G3DSA:3.40.190.10 91 172 6.9E-18 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 PANTHER PTHR30085:SF5 1 312 1.1E-156 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 SUPERFAMILY SSF53850 28 258 6.34E-49 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 Gene3D G3DSA:3.40.190.10 227 257 2.4E-15 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 Gene3D G3DSA:3.40.190.10 34 127 2.4E-15 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 257 8.9E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS12665 834527937d15211aa01e5ef08073a568 343 PANTHER PTHR30085 1 312 1.1E-156 T 22-04-2016 TMO_RS12665 834527937d15211aa01e5ef08073a568 343 SMART SM00062 37 267 1.2E-42 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF TMO_RS12665 834527937d15211aa01e5ef08073a568 343 Gene3D G3DSA:3.40.190.10 128 225 8.9E-14 T 22-04-2016 TMO_RS00810 2513bfec7acdc0e8e853d3025783891b 206 Pfam PF05233 PHB accumulation regulatory domain 82 121 1.3E-17 T 22-04-2016 IPR007897 PHB accumulation regulatory TMO_RS00810 2513bfec7acdc0e8e853d3025783891b 206 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 19 77 1.3E-28 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal TMO_RS00810 2513bfec7acdc0e8e853d3025783891b 206 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 19 121 1.6E-43 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.903 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 Gene3D G3DSA:1.20.5.1030 4 61 1.9E-22 T 22-04-2016 TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 PANTHER PTHR33910:SF1 8 64 4.8E-17 T 22-04-2016 TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 62 3.0E-19 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 60 4.1E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 TMO_RS13325 ab4db59f2307b38fb82de58d79a87873 65 PANTHER PTHR33910 8 64 4.8E-17 T 22-04-2016 TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 Gene3D G3DSA:3.40.1190.20 8 283 6.8E-47 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 SUPERFAMILY SSF53613 7 283 4.21E-46 T 22-04-2016 IPR029056 Ribokinase-like TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 PANTHER PTHR10584 1 281 1.0E-33 T 22-04-2016 TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 Pfam PF00294 pfkB family carbohydrate kinase 8 284 2.3E-29 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 38 57 3.9E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 209 220 3.9E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 PRINTS PR00990 Ribokinase signature 11 32 3.9E-5 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 TMO_RS17025 5feaed44216a2244cafd4ca1fceaab9b 290 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 240 253 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 TMO_RS07655 61c4cd100fe910d5121cfb0dc8bcdbf6 61 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 16 31 - T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 TMO_RS07655 61c4cd100fe910d5121cfb0dc8bcdbf6 61 Pfam PF01679 Proteolipid membrane potential modulator 11 58 4.5E-23 T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 TMO_RS07655 61c4cd100fe910d5121cfb0dc8bcdbf6 61 PANTHER PTHR21659 10 61 4.9E-24 T 22-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Gene3D G3DSA:2.130.10.10 161 439 4.2E-72 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Hamap MF_00671 Protein TolB [tolB]. 5 437 32.122 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 PANTHER PTHR36842 15 441 9.1E-50 T 22-04-2016 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 26 438 1.5E-135 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 SUPERFAMILY SSF69304 164 438 2.22E-55 T 22-04-2016 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Pfam PF07676 WD40-like Beta Propeller Repeat 388 414 0.022 T 22-04-2016 IPR011659 WD40-like Beta Propeller TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Pfam PF07676 WD40-like Beta Propeller Repeat 291 326 1.5E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Pfam PF07676 WD40-like Beta Propeller Repeat 252 282 0.28 T 22-04-2016 IPR011659 WD40-like Beta Propeller TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Pfam PF07676 WD40-like Beta Propeller Repeat 335 367 0.0051 T 22-04-2016 IPR011659 WD40-like Beta Propeller TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Gene3D G3DSA:3.40.50.10070 31 160 3.9E-49 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 Pfam PF04052 TolB amino-terminal domain 32 138 5.7E-34 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 TMO_RS04565 2f0b55b883b505955c95c932b44d82da 442 SUPERFAMILY SSF52964 37 170 1.44E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 TMO_RS17195 12cb26a94accd5dc8141d84086c237d5 136 PANTHER PTHR11780 11 108 2.4E-23 T 22-04-2016 TMO_RS17195 12cb26a94accd5dc8141d84086c237d5 136 PANTHER PTHR11780:SF12 11 108 2.4E-23 T 22-04-2016 TMO_RS17195 12cb26a94accd5dc8141d84086c237d5 136 SUPERFAMILY SSF52833 10 108 4.81E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17195 12cb26a94accd5dc8141d84086c237d5 136 Gene3D G3DSA:3.40.30.10 10 109 1.5E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 SUPERFAMILY SSF52507 2 179 2.09E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 Pfam PF02441 Flavoprotein 5 133 3.7E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 201 387 4.0E-67 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 SUPERFAMILY SSF102645 199 415 9.42E-72 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 PANTHER PTHR14359:SF20 1 413 2.4E-167 T 22-04-2016 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 Gene3D G3DSA:3.40.50.1950 3 182 8.9E-67 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 PANTHER PTHR14359 1 413 2.4E-167 T 22-04-2016 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 410 1.5E-119 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 TMO_RS17920 e0ede180c28d54cad30d4653165d8e25 424 Gene3D G3DSA:3.40.50.10300 198 415 1.2E-81 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 Gene3D G3DSA:3.30.470.20 190 285 1.3E-17 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 SUPERFAMILY SSF56059 120 289 5.4E-32 T 22-04-2016 TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 Gene3D G3DSA:3.40.50.20 18 125 1.3E-8 T 22-04-2016 IPR016185 Pre-ATP-grasp domain TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 Gene3D G3DSA:3.30.1490.20 126 189 1.4E-6 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 PANTHER PTHR21621:SF0 35 282 1.3E-37 T 22-04-2016 TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 Pfam PF08443 RimK-like ATP-grasp domain 121 283 7.0E-17 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type TMO_RS03815 8fabd51fad66dfef6b9ad0f10ee23cd4 324 PANTHER PTHR21621 35 282 1.3E-37 T 22-04-2016 TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF03445 Putative nucleotidyltransferase DUF294 169 304 2.2E-37 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 PANTHER PTHR11911 4 139 4.3E-22 T 22-04-2016 TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 SUPERFAMILY SSF54631 19 147 6.7E-29 T 22-04-2016 TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF00571 CBS domain 21 76 4.3E-12 T 22-04-2016 IPR000644 CBS domain TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF00571 CBS domain 88 141 6.7E-8 T 22-04-2016 IPR000644 CBS domain TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 SMART SM00116 94 142 4.2E-8 T 22-04-2016 IPR000644 CBS domain TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 SMART SM00116 28 76 3.2E-7 T 22-04-2016 IPR000644 CBS domain TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 342 474 8.1E-35 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding TMO_RS04120 9528efc3d8b4bc82d78e530482621ef6 484 Gene3D G3DSA:3.10.580.10 22 139 4.4E-27 T 22-04-2016 TMO_RS03555 f192faa7b7dfd630d5faa3f8346d14f6 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 144 3.3E-15 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 PANTHER PTHR24095:SF169 14 545 1.2E-277 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 532 4.7E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 PANTHER PTHR24095 14 545 1.2E-277 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 SUPERFAMILY SSF56801 18 544 1.44E-145 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:2.30.38.10 375 442 2.0E-17 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.30.300.30 444 542 2.9E-34 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.40.50.980 203 348 5.3E-30 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Pfam PF00501 AMP-binding enzyme 30 449 3.2E-93 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.40.50.980 177 202 6.8E-38 T 22-04-2016 TMO_RS04275 eeccb60a21e89b77e29b6f4b7e14c958 545 Gene3D G3DSA:3.40.50.980 24 137 6.8E-38 T 22-04-2016 TMO_RS03615 880731af50c5d9088ff416033c8ebe94 341 PANTHER PTHR22916 24 298 6.8E-36 T 22-04-2016 TMO_RS03615 880731af50c5d9088ff416033c8ebe94 341 Gene3D G3DSA:3.90.550.10 23 245 2.2E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03615 880731af50c5d9088ff416033c8ebe94 341 Pfam PF00535 Glycosyl transferase family 2 26 187 2.9E-8 T 22-04-2016 IPR001173 Glycosyltransferase 2-like TMO_RS03615 880731af50c5d9088ff416033c8ebe94 341 SUPERFAMILY SSF53448 14 250 4.3E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS03615 880731af50c5d9088ff416033c8ebe94 341 PANTHER PTHR22916:SF22 24 298 6.8E-36 T 22-04-2016 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 Gene3D G3DSA:1.20.1300.10 3 123 3.7E-46 T 22-04-2016 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 PIRSF PIRSF000178 1 126 3.7E-42 T 22-04-2016 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 PANTHER PTHR10978 6 124 1.8E-41 T 22-04-2016 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 6 124 7.5E-42 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 SUPERFAMILY SSF81343 5 123 2.94E-37 T 22-04-2016 TMO_RS16505 5d5db087c3f170561c82ed28ae8bf8fa 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 117 1.2E-32 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 Pfam PF00293 NUDIX domain 2 120 1.1E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 SUPERFAMILY SSF55811 3 123 3.79E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 PRINTS PR00502 NUDIX hydrolase family signature 30 44 7.7E-6 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 PRINTS PR00502 NUDIX hydrolase family signature 44 59 7.7E-6 T 22-04-2016 IPR020476 NUDIX hydrolase TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 Gene3D G3DSA:3.90.79.10 4 126 7.2E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 TMO_RS00170 2772b5897cef4d342c9295d4f4ec3b22 142 PANTHER PTHR22769 2 121 2.4E-17 T 22-04-2016 TMO_RS11985 65229eee6630cd0935a86af0fee04ea4 414 Pfam PF04233 Phage Mu protein F like protein 54 171 1.4E-12 T 22-04-2016 IPR006528 Phage head morphogenesis domain TMO_RS13295 dc3eb963863ed068d32ab0dfc51a2dd7 77 Gene3D G3DSA:2.30.30.40 31 63 2.6E-4 T 22-04-2016 TMO_RS15860 500a80e781aef9c4f22e0482496b4645 206 Pfam PF02630 SCO1/SenC 34 191 3.0E-50 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC TMO_RS15860 500a80e781aef9c4f22e0482496b4645 206 PANTHER PTHR12151 5 206 5.5E-72 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC TMO_RS15860 500a80e781aef9c4f22e0482496b4645 206 SUPERFAMILY SSF52833 49 205 8.08E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15860 500a80e781aef9c4f22e0482496b4645 206 Gene3D G3DSA:3.40.30.10 15 204 1.9E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS08050 a69cf8270f24c5a2ab454079251fc300 327 SUPERFAMILY SSF51735 7 311 3.4E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08050 a69cf8270f24c5a2ab454079251fc300 327 PANTHER PTHR10366 6 310 1.6E-18 T 22-04-2016 TMO_RS08050 a69cf8270f24c5a2ab454079251fc300 327 Gene3D G3DSA:3.40.50.720 3 250 4.7E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08050 a69cf8270f24c5a2ab454079251fc300 327 Pfam PF13460 NAD(P)H-binding 11 117 9.4E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14785 600fe18295d9ca2fedf0d73230f1739b 100 Pfam PF02361 Cobalt transport protein 2 66 5.1E-13 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component TMO_RS29365 9fb85f09199b94a1ade976e82c70567b 712 SUPERFAMILY SSF103515 413 712 7.06E-37 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29365 9fb85f09199b94a1ade976e82c70567b 712 Pfam PF03797 Autotransporter beta-domain 468 703 5.4E-28 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29365 9fb85f09199b94a1ade976e82c70567b 712 Gene3D G3DSA:2.40.128.130 418 712 2.4E-36 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29365 9fb85f09199b94a1ade976e82c70567b 712 SMART SM00869 434 701 1.3E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS29365 9fb85f09199b94a1ade976e82c70567b 712 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 464 712 2.2E-21 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 SUPERFAMILY SSF89796 1 312 9.94E-98 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 Pfam PF02515 CoA-transferase family III 1 307 3.2E-94 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 PANTHER PTHR24023:SF593 1 266 1.8E-31 T 22-04-2016 TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 Gene3D G3DSA:3.40.50.10540 1 154 8.3E-78 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 Gene3D G3DSA:3.40.50.10540 243 312 8.3E-78 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 Gene3D G3DSA:3.30.1540.10 160 242 4.6E-32 T 22-04-2016 TMO_RS12750 30fa64850c7d03bce5bac9ee3e8b1e06 314 PANTHER PTHR24023 1 266 1.8E-31 T 22-04-2016 TMO_RS29645 661593b6be37bc5ba77b1d7d3e7ea1a8 303 Gene3D G3DSA:3.40.50.300 119 184 6.6E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29645 661593b6be37bc5ba77b1d7d3e7ea1a8 303 SUPERFAMILY SSF53795 121 179 3.36E-11 T 22-04-2016 TMO_RS08730 1d649a1a1a1ae1a1ed29f67ae584c680 707 PANTHER PTHR32309 24 692 3.7E-36 T 22-04-2016 TMO_RS08730 1d649a1a1a1ae1a1ed29f67ae584c680 707 Pfam PF02706 Chain length determinant protein 32 181 5.0E-5 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 TMO_RS08730 1d649a1a1a1ae1a1ed29f67ae584c680 707 SUPERFAMILY SSF52540 547 702 4.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08730 1d649a1a1a1ae1a1ed29f67ae584c680 707 Gene3D G3DSA:3.40.50.300 549 694 2.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08730 1d649a1a1a1ae1a1ed29f67ae584c680 707 PANTHER PTHR32309:SF13 24 692 3.7E-36 T 22-04-2016 TMO_RS20535 26a5e7adf0762e4f0dc7415d4d5ed51a 367 Gene3D G3DSA:3.40.50.970 16 218 1.0E-5 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS20535 26a5e7adf0762e4f0dc7415d4d5ed51a 367 SUPERFAMILY SSF52518 18 202 7.65E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 SUPERFAMILY SSF51569 3 294 1.37E-79 T 22-04-2016 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 SUPERFAMILY SSF110921 420 521 4.45E-19 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 SMART SM00917 376 525 4.3E-28 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 PANTHER PTHR10277 1 533 1.8E-241 T 22-04-2016 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 PANTHER PTHR10277:SF5 1 533 1.8E-241 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 Pfam PF00682 HMGL-like 6 269 1.5E-45 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 Pfam PF08502 LeuA allosteric (dimerisation) domain 378 521 8.1E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 6 527 1.2E-193 T 22-04-2016 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101|UniPathway: UPA00047 TMO_RS11545 fe9f8972e916891fd3f40faae4291a8b 545 Gene3D G3DSA:3.20.20.70 4 350 1.1E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 ProSitePatterns PS00163 Fumarate lyases signature. 321 330 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.20.200.10 143 406 4.5E-109 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 SUPERFAMILY SSF48557 8 466 1.07E-160 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.7E-6 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 179 199 2.7E-6 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00145 Argininosuccinate lyase family signature 321 337 2.7E-6 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Pfam PF10415 Fumarase C C-terminus 412 465 5.0E-25 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PANTHER PTHR11444:SF1 1 466 5.1E-269 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.10.275.10 7 142 2.5E-62 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 9 465 6.5E-232 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Pfam PF00206 Lyase 16 346 1.1E-113 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Gene3D G3DSA:1.10.40.30 409 467 4.5E-31 T 22-04-2016 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.8E-35 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 275 302 2.8E-35 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 2.8E-35 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PRINTS PR00149 Fumarate lyase superfamily signature 321 337 2.8E-35 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 Hamap MF_00743 Fumarate hydratase class II [fumC]. 8 466 91.737 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 TMO_RS00420 4f4fd1dfaffc9d839d1692b01cba25de 468 PANTHER PTHR11444 1 466 5.1E-269 T 22-04-2016 IPR000362 Fumarate lyase family TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 SUPERFAMILY SSF54373 178 278 1.41E-40 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 SUPERFAMILY SSF51905 277 393 2.81E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 SUPERFAMILY SSF51905 3 175 2.81E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 Pfam PF01494 FAD binding domain 4 345 1.1E-79 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PANTHER PTHR13789:SF192 4 393 9.6E-178 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PANTHER PTHR13789 4 393 9.6E-178 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 4 394 2.5E-169 T 22-04-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.0E-27 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.0E-27 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.0E-27 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.0E-27 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 Gene3D G3DSA:3.30.9.10 157 302 1.3E-62 T 22-04-2016 TMO_RS12220 d752805f755fb99053442fcb2ba0e3cb 394 Gene3D G3DSA:3.40.50.720 3 156 1.1E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 Pfam PF02515 CoA-transferase family III 11 359 1.6E-88 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 SUPERFAMILY SSF89796 9 376 3.01E-114 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 PANTHER PTHR24023:SF591 27 371 3.5E-94 T 22-04-2016 TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 Gene3D G3DSA:3.40.50.10540 299 376 2.4E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 Gene3D G3DSA:3.40.50.10540 9 211 2.4E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 Gene3D G3DSA:3.30.1540.10 222 298 1.7E-13 T 22-04-2016 TMO_RS03520 ac1aae94ff144d5af449e11956819214 382 PANTHER PTHR24023 27 371 3.5E-94 T 22-04-2016 TMO_RS07345 e3ec54e450342fb67a0e436a9553dd56 263 Pfam PF01925 Sulfite exporter TauE/SafE 12 260 2.0E-37 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS07345 e3ec54e450342fb67a0e436a9553dd56 263 PANTHER PTHR30269 3 263 1.3E-70 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS07345 e3ec54e450342fb67a0e436a9553dd56 263 PANTHER PTHR30269:SF7 3 263 1.3E-70 T 22-04-2016 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 Gene3D G3DSA:3.20.20.70 10 205 5.8E-56 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 SUPERFAMILY SSF51569 9 204 7.33E-51 T 22-04-2016 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 PANTHER PTHR30246 1 210 6.0E-58 T 22-04-2016 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 Pfam PF01081 KDPG and KHG aldolase 12 187 4.7E-22 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 PANTHER PTHR30246:SF1 1 210 6.0E-58 T 22-04-2016 TMO_RS16970 5e920ed6dc382da0508cc619453c5ae1 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 125 138 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 PANTHER PTHR24096 105 421 2.1E-25 T 22-04-2016 TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 ProSitePatterns PS00455 Putative AMP-binding domain signature. 241 252 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 Gene3D G3DSA:3.40.50.980 249 395 2.7E-26 T 22-04-2016 TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 Gene3D G3DSA:3.40.50.980 119 248 2.4E-9 T 22-04-2016 TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 SUPERFAMILY SSF56801 103 420 5.76E-45 T 22-04-2016 TMO_RS20790 5afc2eebea4f81477400c84a4b975698 422 Pfam PF00501 AMP-binding enzyme 232 393 1.2E-23 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 Gene3D G3DSA:2.40.50.140 644 713 3.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 SUPERFAMILY SSF50249 641 723 2.57E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 SMART SM00316 641 724 1.0E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 Hamap MF_01895 Ribonuclease R [rnr]. 32 724 52.114 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF00575 S1 RNA binding domain 641 712 3.1E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF08461 Ribonuclease R winged-helix domain 16 65 8.5E-6 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 PANTHER PTHR23355:SF9 141 757 1.9E-154 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 PANTHER PTHR23355:SF9 1 18 1.9E-154 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 SUPERFAMILY SSF50249 232 641 1.26E-130 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 PANTHER PTHR23355 141 757 1.9E-154 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 130 721 7.7E-153 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 SMART SM00955 264 595 5.8E-156 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 Pfam PF00773 RNB domain 264 593 1.7E-97 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 PANTHER PTHR23355 1 18 1.9E-154 T 22-04-2016 TMO_RS12855 3abf8c54b7d42ffb62925265678042ac 781 TIGRFAM TIGR02063 RNase_R: ribonuclease R 13 725 2.2E-203 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 PANTHER PTHR30151 4 30 2.5E-106 T 22-04-2016 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 PANTHER PTHR30151 46 275 2.5E-106 T 22-04-2016 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 67 265 4.9E-68 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 PANTHER PTHR30151:SF7 4 30 2.5E-106 T 22-04-2016 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 PANTHER PTHR30151:SF7 46 275 2.5E-106 T 22-04-2016 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 SUPERFAMILY SSF161098 79 263 1.02E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 271 3.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS01655 af1b7920f866c8816fc5705b2811e386 275 Gene3D G3DSA:1.10.3720.10 76 269 2.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF05746 DALR anticodon binding domain 452 580 1.0E-29 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SMART SM01016 5 94 6.8E-35 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 580 23.801 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF52374 119 463 3.94E-82 T 22-04-2016 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PANTHER PTHR11956:SF6 1 303 1.1E-182 T 22-04-2016 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 1.7E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 1.7E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 321 342 1.7E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 1.7E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PANTHER PTHR11956 1 303 1.1E-182 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:1.10.730.10 458 580 5.1E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PANTHER PTHR11956 319 580 1.1E-182 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:3.40.50.620 118 457 7.1E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Gene3D G3DSA:3.30.1360.70 6 113 4.6E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF00750 tRNA synthetases class I (R) 103 183 1.1E-10 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 PANTHER PTHR11956:SF6 319 580 1.1E-182 T 22-04-2016 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 15 94 8.4E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SMART SM00836 452 580 1.1E-55 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF47323 446 580 1.24E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 29 579 8.6E-107 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS07585 f22116d1c552ad8ec13b9c8cfd7d1e96 581 SUPERFAMILY SSF55190 3 114 6.02E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 Pfam PF02224 Cytidylate kinase 11 210 4.0E-54 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 Hamap MF_00238 Cytidylate kinase [cmk]. 9 214 30.846 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 PANTHER PTHR21299 9 214 7.3E-45 T 22-04-2016 TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 TIGRFAM TIGR00017 cmk: cytidylate kinase 9 208 5.2E-50 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 Gene3D G3DSA:3.40.50.300 8 210 6.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16235 fef9f5491f5c002c993c42e39b6886f6 214 SUPERFAMILY SSF52540 8 213 1.26E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PANTHER PTHR10804:SF82 2 262 1.0E-142 T 22-04-2016 TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 Hamap MF_01974 Methionine aminopeptidase [map]. 2 249 41.843 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.1E-98 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 Pfam PF00557 Metallopeptidase family M24 11 240 3.2E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 Gene3D G3DSA:3.90.230.10 1 250 1.5E-100 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 SUPERFAMILY SSF55920 1 254 1.83E-93 T 22-04-2016 IPR000994 Peptidase M24, structural domain TMO_RS10915 59b52b93115947e7079f12d6da88296a 264 PANTHER PTHR10804 2 262 1.0E-142 T 22-04-2016 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 Gene3D G3DSA:3.30.499.10 2 160 1.7E-16 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 Pfam PF00330 Aconitase family (aconitate hydratase) 80 410 3.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 SUPERFAMILY SSF53732 1 418 1.96E-85 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 Gene3D G3DSA:3.40.1060.10 161 265 1.1E-9 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 PANTHER PTHR11670:SF34 1 417 1.2E-65 T 22-04-2016 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 Gene3D G3DSA:3.30.499.10 274 417 4.4E-39 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS14370 cb101520e41bec162d0fb64f9beae09e 425 PANTHER PTHR11670 1 417 1.2E-65 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 PIRSF PIRSF003107 3 222 1.1E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 Gene3D G3DSA:1.20.58.220 124 217 1.9E-32 T 22-04-2016 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 SUPERFAMILY SSF109755 8 224 9.84E-71 T 22-04-2016 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 217 1.2E-68 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 Pfam PF01895 PhoU domain 124 209 8.1E-23 T 22-04-2016 IPR026022 PhoU domain TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 Pfam PF01895 PhoU domain 21 108 3.0E-21 T 22-04-2016 IPR026022 PhoU domain TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 PANTHER PTHR10010:SF14 4 219 8.3E-73 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 Gene3D G3DSA:1.20.58.220 5 119 9.4E-31 T 22-04-2016 TMO_RS17665 62a2746e81a04e13bc2751cc72ce0bc7 239 PANTHER PTHR10010 4 219 8.3E-73 T 22-04-2016 TMO_RS09580 120311c2603f0e2e36d85279f4632ea8 254 Pfam PF01925 Sulfite exporter TauE/SafE 14 248 2.8E-35 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS09580 120311c2603f0e2e36d85279f4632ea8 254 PANTHER PTHR30269 6 251 9.1E-71 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS09580 120311c2603f0e2e36d85279f4632ea8 254 PANTHER PTHR30269:SF10 6 251 9.1E-71 T 22-04-2016 TMO_RS10405 ec2f3f3c226bd47f4af05d8f17eaba93 177 PANTHER PTHR15887 39 167 4.9E-21 T 22-04-2016 TMO_RS10405 ec2f3f3c226bd47f4af05d8f17eaba93 177 Pfam PF11911 Protein of unknown function (DUF3429) 34 168 5.6E-34 T 22-04-2016 IPR021836 Protein of unknown function DUF3429 TMO_RS03885 46a8910e67e7d210f3b09c8fbb0a876a 151 SUPERFAMILY SSF55729 9 150 8.89E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS03885 46a8910e67e7d210f3b09c8fbb0a876a 151 Pfam PF13673 Acetyltransferase (GNAT) domain 57 134 5.8E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS03885 46a8910e67e7d210f3b09c8fbb0a876a 151 PANTHER PTHR23091:SF277 8 133 1.7E-20 T 22-04-2016 TMO_RS03885 46a8910e67e7d210f3b09c8fbb0a876a 151 PANTHER PTHR23091 8 133 1.7E-20 T 22-04-2016 TMO_RS03885 46a8910e67e7d210f3b09c8fbb0a876a 151 Gene3D G3DSA:3.40.630.30 8 150 6.4E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS06530 1c4d57b71ffc9c7281b3d1b21c77ff92 379 Pfam PF11017 Protein of unknown function (DUF2855) 42 362 3.9E-104 T 22-04-2016 IPR021276 Protein of unknown function DUF2855 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF46929 167 214 1.06E-8 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 206 6.4E-36 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF50249 1 63 1.37E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Pfam PF07499 RuvA, C-terminal domain 166 213 5.3E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Pfam PF14520 Helix-hairpin-helix domain 72 130 8.3E-13 T 22-04-2016 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 214 28.196 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Pfam PF01330 RuvA N terminal domain 1 62 5.6E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 PANTHER PTHR33796 2 215 8.0E-57 T 22-04-2016 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:1.10.150.20 67 134 5.1E-25 T 22-04-2016 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:2.40.50.140 1 64 1.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 SUPERFAMILY SSF47781 65 132 1.11E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 TMO_RS04530 713bd9b597ba20cc02c306327f04a821 215 Gene3D G3DSA:1.10.8.10 166 214 2.0E-9 T 22-04-2016 TMO_RS05255 7f4f14c0b5d3b597f3efccee1d91ac91 366 SUPERFAMILY SSF51430 6 335 1.83E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS05255 7f4f14c0b5d3b597f3efccee1d91ac91 366 Pfam PF00248 Aldo/keto reductase family 18 335 5.6E-63 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS05255 7f4f14c0b5d3b597f3efccee1d91ac91 366 Gene3D G3DSA:3.20.20.100 12 336 4.1E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS05255 7f4f14c0b5d3b597f3efccee1d91ac91 366 PANTHER PTHR11732 255 335 4.0E-102 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS05255 7f4f14c0b5d3b597f3efccee1d91ac91 366 PANTHER PTHR11732 4 231 4.0E-102 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 Pfam PF00149 Calcineurin-like phosphoesterase 5 248 4.0E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 SUPERFAMILY SSF56300 181 266 9.95E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 SUPERFAMILY SSF56300 3 140 9.95E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 PANTHER PTHR37844 1 19 1.7E-32 T 22-04-2016 TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 PANTHER PTHR37844 40 268 1.7E-32 T 22-04-2016 TMO_RS11355 a1c9ed19690821c0f52a5a6f108f5e13 279 Gene3D G3DSA:3.60.21.10 3 275 1.8E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS16360 d620823c8e7bde8304aedd514e5d13fd 255 PANTHER PTHR22572:SF15 15 247 2.0E-41 T 22-04-2016 TMO_RS16360 d620823c8e7bde8304aedd514e5d13fd 255 SUPERFAMILY SSF53448 15 248 7.66E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS16360 d620823c8e7bde8304aedd514e5d13fd 255 Gene3D G3DSA:3.90.550.10 13 248 5.2E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS16360 d620823c8e7bde8304aedd514e5d13fd 255 Pfam PF00483 Nucleotidyl transferase 16 145 9.1E-16 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 TMO_RS16360 d620823c8e7bde8304aedd514e5d13fd 255 PANTHER PTHR22572 15 247 2.0E-41 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 SUPERFAMILY SSF52317 1 194 5.9E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 Gene3D G3DSA:3.60.120.10 234 706 1.6E-120 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 Gene3D G3DSA:3.40.50.880 2 194 3.2E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 Pfam PF00117 Glutamine amidotransferase class-I 4 192 2.3E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 192 1.9E-42 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PANTHER PTHR11236 1 706 6.3E-190 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 Pfam PF00425 chorismate binding enzyme 441 698 2.8E-80 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PANTHER PTHR11236:SF18 1 706 6.3E-190 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00097 Anthranilate synthase component II signature 107 115 2.8E-22 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00097 Anthranilate synthase component II signature 82 93 2.8E-22 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00097 Anthranilate synthase component II signature 172 185 2.8E-22 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.8E-22 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00097 Anthranilate synthase component II signature 127 139 2.8E-22 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 SUPERFAMILY SSF56322 253 706 4.71E-106 T 22-04-2016 IPR005801 ADC synthase GO:0009058 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 6.7E-7 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 46 60 6.7E-7 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.7E-12 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 1.7E-12 T 22-04-2016 TMO_RS02750 f7e7d9a869d55f8e9aa08f15f35c58da 714 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.7E-12 T 22-04-2016 TMO_RS05195 18a0a567a07b91af3720f123d956192c 316 Gene3D G3DSA:1.10.3720.10 91 309 8.8E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05195 18a0a567a07b91af3720f123d956192c 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 7.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS05195 18a0a567a07b91af3720f123d956192c 316 PANTHER PTHR30465:SF24 1 315 1.0E-131 T 22-04-2016 TMO_RS05195 18a0a567a07b91af3720f123d956192c 316 PANTHER PTHR30465 1 315 1.0E-131 T 22-04-2016 TMO_RS05195 18a0a567a07b91af3720f123d956192c 316 SUPERFAMILY SSF161098 92 297 2.29E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 Pfam PF01175 Urocanase 11 546 9.8E-258 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 PIRSF PIRSF001423 2 557 3.7E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 PANTHER PTHR12216 9 552 0.0 T 22-04-2016 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 Hamap MF_00577 Urocanate hydratase [hutU]. 5 555 50.584 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 PANTHER PTHR12216:SF3 9 552 0.0 T 22-04-2016 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 Gene3D G3DSA:3.40.50.10730 141 348 2.8E-93 T 22-04-2016 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 552 2.3E-292 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 SUPERFAMILY SSF111326 7 553 3.92E-260 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 Gene3D G3DSA:3.40.1770.10 9 140 2.1E-161 T 22-04-2016 TMO_RS14860 7d5691bcda4a18034a1f590ac0ce78de 557 Gene3D G3DSA:3.40.1770.10 359 553 2.1E-161 T 22-04-2016 TMO_RS06565 4ff9972e96a6aa2e8e09fa6690398f8a 521 PANTHER PTHR34219:SF4 1 505 5.3E-155 T 22-04-2016 TMO_RS06565 4ff9972e96a6aa2e8e09fa6690398f8a 521 Pfam PF03929 PepSY-associated TM region 10 370 3.8E-52 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS06565 4ff9972e96a6aa2e8e09fa6690398f8a 521 PANTHER PTHR34219 1 505 5.3E-155 T 22-04-2016 TMO_RS14010 86b11df100ea4865938e544367011750 243 PANTHER PTHR11410:SF6 7 243 4.2E-101 T 22-04-2016 TMO_RS14010 86b11df100ea4865938e544367011750 243 PANTHER PTHR11410 7 243 4.2E-101 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 243 16.606 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 ProSitePatterns PS00449 ATP synthase a subunit signature. 173 182 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site TMO_RS14010 86b11df100ea4865938e544367011750 243 SUPERFAMILY SSF81336 81 237 7.32E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 89 105 1.6E-30 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 150 165 1.6E-30 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 223 238 1.6E-30 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 PRINTS PR00123 ATP synthase A subunit signature 170 192 1.6E-30 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 Gene3D G3DSA:1.20.120.220 81 242 1.4E-53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 8 239 7.3E-74 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS14010 86b11df100ea4865938e544367011750 243 Pfam PF00119 ATP synthase A chain 33 236 3.1E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 Gene3D G3DSA:1.10.357.10 57 247 2.2E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 94 117 7.0E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 73 86 7.0E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 SUPERFAMILY SSF46689 60 144 2.62E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 Pfam PF00440 Bacterial regulatory proteins, tetR family 73 119 5.9E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS28680 84db269df0b057e7d8ddd9590155e81a 251 PANTHER PTHR30055 53 228 1.9E-25 T 22-04-2016 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 Pfam PF03462 PCRF domain 12 204 2.8E-66 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 PANTHER PTHR11075:SF9 2 357 4.5E-173 T 22-04-2016 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 Gene3D G3DSA:3.30.160.20 211 287 3.9E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 1.9E-151 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 SMART SM00937 64 179 4.8E-52 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.525 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 Gene3D G3DSA:1.20.58.410 6 93 7.1E-9 T 22-04-2016 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 PANTHER PTHR11075 2 357 4.5E-173 T 22-04-2016 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 Pfam PF00472 RF-1 domain 212 321 2.8E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_RS01930 8842331b5d898d53d3fc97991a102364 362 SUPERFAMILY SSF75620 11 354 6.8E-124 T 22-04-2016 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 SUPERFAMILY SSF161111 9 215 7.32E-26 T 22-04-2016 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 Gene3D G3DSA:1.20.1510.10 10 213 3.6E-20 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 SUPERFAMILY SSF160240 232 293 5.89E-6 T 22-04-2016 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 Gene3D G3DSA:3.30.70.1350 237 292 5.8E-7 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 PANTHER PTHR11562 5 292 2.2E-18 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 292 1.7E-29 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 PANTHER PTHR11562:SF55 5 292 2.2E-18 T 22-04-2016 TMO_RS07210 2a225a1f3298584c3f076624d0e0fb64 297 Pfam PF01545 Cation efflux family 15 213 4.8E-21 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 Pfam PF07690 Major Facilitator Superfamily 24 358 3.6E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 Gene3D G3DSA:1.20.1250.20 211 392 2.2E-8 T 22-04-2016 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 PANTHER PTHR23502 29 386 4.5E-71 T 22-04-2016 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 SUPERFAMILY SSF103473 6 393 8.11E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 Gene3D G3DSA:1.20.1250.20 11 190 5.0E-26 T 22-04-2016 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 PANTHER PTHR23502:SF19 29 386 4.5E-71 T 22-04-2016 TMO_RS13020 a23d0e8828f3f6ad1324d31843f20227 394 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 21 387 1.6E-68 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS29640 11b875f038574e9fb47ad3c97e30a605 663 SUPERFAMILY SSF48239 597 653 1.65E-18 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS29640 11b875f038574e9fb47ad3c97e30a605 663 SUPERFAMILY SSF48239 355 560 1.65E-18 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS29640 11b875f038574e9fb47ad3c97e30a605 663 Gene3D G3DSA:1.50.10.20 602 655 8.7E-19 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS29640 11b875f038574e9fb47ad3c97e30a605 663 Gene3D G3DSA:1.50.10.20 356 570 8.7E-19 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid TMO_RS13515 a7200db9763f3760e10e318d579c9c5d 114 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 96 3.0E-24 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS13515 a7200db9763f3760e10e318d579c9c5d 114 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 24 93 1.1E-30 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS13515 a7200db9763f3760e10e318d579c9c5d 114 SMART SM01259 24 95 1.2E-41 T 22-04-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 SMART SM00965 77 128 3.5E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 SUPERFAMILY SSF56935 136 826 3.79E-142 T 22-04-2016 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 825 1.8E-116 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 PANTHER PTHR32552 162 826 3.9E-173 T 22-04-2016 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 Pfam PF00593 TonB dependent receptor 588 825 2.6E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 Gene3D G3DSA:2.40.170.20 297 826 4.7E-154 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 282 4.1E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 PANTHER PTHR32552:SF17 162 826 3.9E-173 T 22-04-2016 TMO_RS11415 442e0fb45700ced97093ed879abf49d5 826 Gene3D G3DSA:2.170.130.10 132 293 5.5E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 230 1.3E-37 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 PIRSF PIRSF037208 1 242 6.3E-85 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 PANTHER PTHR21367 20 236 5.2E-61 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 18 87 3.1E-14 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 PANTHER PTHR21367:SF0 20 236 5.2E-61 T 22-04-2016 TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 SUPERFAMILY SSF55729 83 239 1.86E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS08095 7adf00bdc8dc8aa8516e6a345ad31672 242 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 239 42.672 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic TMO_RS11895 26c5297ba9702a409230dae08b131549 268 Gene3D G3DSA:3.40.50.1820 56 265 3.6E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS11895 26c5297ba9702a409230dae08b131549 268 Pfam PF12697 Alpha/beta hydrolase family 65 258 9.8E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS11895 26c5297ba9702a409230dae08b131549 268 SUPERFAMILY SSF53474 48 260 7.83E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS11895 26c5297ba9702a409230dae08b131549 268 PANTHER PTHR10992 12 266 8.7E-22 T 22-04-2016 TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 Pfam PF01695 IstB-like ATP binding protein 54 229 3.3E-62 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050:SF6 1 251 6.1E-74 T 22-04-2016 TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 SUPERFAMILY SSF52540 94 232 5.13E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 Gene3D G3DSA:3.40.50.300 84 231 2.2E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 PANTHER PTHR30050 1 251 6.1E-74 T 22-04-2016 TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 SMART SM00382 97 230 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04080 4a3e34797e9e86d765034ff1a796854f 263 PIRSF PIRSF003073 1 252 1.8E-74 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 PANTHER PTHR12418 1 141 2.0E-35 T 22-04-2016 TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 SUPERFAMILY SSF54637 7 140 3.49E-29 T 22-04-2016 IPR029069 HotDog domain TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 Pfam PF03061 Thioesterase superfamily 54 129 8.4E-12 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 Gene3D G3DSA:3.10.129.10 18 141 8.8E-40 T 22-04-2016 IPR029069 HotDog domain TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 137 6.6E-14 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS12905 a450fac1411c18a963ce9f1330fb1253 142 PANTHER PTHR12418:SF30 1 141 2.0E-35 T 22-04-2016 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 PANTHER PTHR24220 21 340 1.6E-133 T 22-04-2016 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 340 1.7E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 PANTHER PTHR24220:SF336 21 340 1.6E-133 T 22-04-2016 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 SMART SM00382 55 247 3.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 Gene3D G3DSA:3.40.50.300 18 271 8.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 249 321 3.0E-14 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 SUPERFAMILY SSF52540 20 269 3.04E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01505 614a9de7d73666abf1f0f0ea512496e0 342 Pfam PF00005 ABC transporter 46 197 7.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS11020 288e7f0b606d51a3a1864fb9987e69f1 326 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 102 307 1.8E-71 T 22-04-2016 IPR014142 P-type conjugative transfer protein TrbG TMO_RS11020 288e7f0b606d51a3a1864fb9987e69f1 326 Pfam PF03524 Conjugal transfer protein 101 320 7.4E-62 T 22-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 258 1.9E-69 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 Gene3D G3DSA:3.60.10.10 1 258 1.2E-83 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 SUPERFAMILY SSF56219 1 258 1.11E-80 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 251 9.4E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 PANTHER PTHR22748 1 266 9.3E-100 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 PANTHER PTHR22748:SF7 1 266 9.3E-100 T 22-04-2016 TMO_RS07570 f2a5063fbbca54620c93cb9a0a292e37 277 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 8.1E-71 T 22-04-2016 TMO_RS12365 1fe7eca5d2653f2c391cd39cc3a3a78f 200 Pfam PF16233 Domain of unknown function (DUF4893) 37 198 3.1E-58 T 22-04-2016 IPR032609 Protein of unknown function DUF4893 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PANTHER PTHR30537 1 295 1.9E-84 T 22-04-2016 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:3.40.190.10 93 174 1.7E-24 T 22-04-2016 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:3.40.190.10 175 257 3.9E-18 T 22-04-2016 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 SUPERFAMILY SSF53850 91 290 9.05E-31 T 22-04-2016 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 SUPERFAMILY SSF46785 3 87 4.21E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Gene3D G3DSA:1.10.10.10 1 87 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 PANTHER PTHR30537:SF26 1 295 1.9E-84 T 22-04-2016 TMO_RS05205 9e18569f4b4fcda0a0e6e5e3d17cb31a 300 Pfam PF03466 LysR substrate binding domain 91 286 3.8E-31 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 SUPERFAMILY SSF52540 1 180 1.23E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 PANTHER PTHR40072:SF2 2 63 5.5E-19 T 22-04-2016 TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 Gene3D G3DSA:3.40.50.300 1 183 1.4E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 3 122 4.0E-24 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 3 143 1.2E-27 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 TMO_RS10790 19254def0dc0d8957b5df0bc327f12b8 188 PANTHER PTHR40072 2 63 5.5E-19 T 22-04-2016 TMO_RS11655 e26d05cf3e362c1dc937ce85b519ea46 277 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 163 3.0E-51 T 22-04-2016 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal TMO_RS11655 e26d05cf3e362c1dc937ce85b519ea46 277 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 23 270 2.7E-60 T 22-04-2016 IPR011928 Bacteriophage phiJL001, Gp84 TMO_RS11655 e26d05cf3e362c1dc937ce85b519ea46 277 Pfam PF09356 Phage conserved hypothetical protein BR0599 194 270 5.0E-23 T 22-04-2016 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 Gene3D G3DSA:3.50.50.60 186 265 2.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 Gene3D G3DSA:3.50.50.60 358 404 2.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 Gene3D G3DSA:3.50.50.60 34 133 2.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 PANTHER PTHR13847:SF210 3 435 1.4E-126 T 22-04-2016 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 PANTHER PTHR13847 3 435 1.4E-126 T 22-04-2016 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 SUPERFAMILY SSF51905 358 427 7.34E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 SUPERFAMILY SSF51905 43 266 7.34E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS02040 0050c6f5252b34366a3352dc04b61c1f 437 Pfam PF01266 FAD dependent oxidoreductase 44 394 1.5E-51 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS29170 2e7a82353f8dc358217e4a7592cf9516 607 Gene3D G3DSA:3.40.50.450 25 198 5.1E-8 T 22-04-2016 TMO_RS29170 2e7a82353f8dc358217e4a7592cf9516 607 SUPERFAMILY SSF102405 25 197 1.56E-8 T 22-04-2016 TMO_RS07070 c80d0ed47342ca74a3533d152e77ec35 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 424 2.6E-100 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS07070 c80d0ed47342ca74a3533d152e77ec35 428 PIRSF PIRSF006066 3 428 1.2E-92 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS07070 c80d0ed47342ca74a3533d152e77ec35 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 422 5.5E-91 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS07070 c80d0ed47342ca74a3533d152e77ec35 428 PANTHER PTHR33362 4 424 8.3E-118 T 22-04-2016 TMO_RS07070 c80d0ed47342ca74a3533d152e77ec35 428 PANTHER PTHR33362:SF5 4 424 8.3E-118 T 22-04-2016 TMO_RS05990 70db8e372f615787bd0f45d00effe592 120 Gene3D G3DSA:2.60.120.10 21 111 1.2E-24 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS05990 70db8e372f615787bd0f45d00effe592 120 SUPERFAMILY SSF51182 20 115 1.15E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS05990 70db8e372f615787bd0f45d00effe592 120 Pfam PF12973 ChrR Cupin-like domain 24 107 4.3E-20 T 22-04-2016 IPR025979 ChrR-like cupin domain TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 PANTHER PTHR19288 6 288 5.5E-63 T 22-04-2016 TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 PANTHER PTHR19288:SF3 6 288 5.5E-63 T 22-04-2016 TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 Gene3D G3DSA:3.40.50.1000 17 88 8.3E-27 T 22-04-2016 IPR023214 HAD-like domain TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 Gene3D G3DSA:3.40.50.1000 200 253 8.3E-27 T 22-04-2016 IPR023214 HAD-like domain TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 TIGRFAM TIGR01459 HAD-SF-IIA-hyp4: HAD hydrolase, TIGR01459 family 11 245 2.2E-55 T 22-04-2016 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 19 245 5.1E-30 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 SUPERFAMILY SSF56784 17 264 4.72E-44 T 22-04-2016 IPR023214 HAD-like domain TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 Pfam PF13242 HAD-hyrolase-like 200 254 6.5E-10 T 22-04-2016 TMO_RS16755 ad7b5553bb2684f5e7bdd2e663bb269e 290 Pfam PF13344 Haloacid dehalogenase-like hydrolase 19 118 4.5E-15 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA TMO_RS03380 6617bdb9110eaef24ff340978e874d2c 203 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 51 180 2.6E-24 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS03380 6617bdb9110eaef24ff340978e874d2c 203 PANTHER PTHR35011 12 202 6.9E-16 T 22-04-2016 TMO_RS11115 d0d8bd1427a4ffaf9ee05d65094a102f 95 Pfam PF12728 Helix-turn-helix domain 12 62 1.4E-6 T 22-04-2016 TMO_RS11115 d0d8bd1427a4ffaf9ee05d65094a102f 95 Gene3D G3DSA:1.10.10.10 12 61 1.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11115 d0d8bd1427a4ffaf9ee05d65094a102f 95 SUPERFAMILY SSF46955 11 61 4.94E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain TMO_RS13485 200bbc4662b9e29bd95d440d8cf95fce 318 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 86 301 4.6E-96 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 TMO_RS13485 200bbc4662b9e29bd95d440d8cf95fce 318 Pfam PF01618 MotA/TolQ/ExbB proton channel family 190 287 3.6E-33 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS13485 200bbc4662b9e29bd95d440d8cf95fce 318 PANTHER PTHR30572:SF11 78 305 2.2E-52 T 22-04-2016 TMO_RS13485 200bbc4662b9e29bd95d440d8cf95fce 318 PANTHER PTHR30572 78 305 2.2E-52 T 22-04-2016 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 Pfam PF01593 Flavin containing amine oxidoreductase 28 283 8.0E-14 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 PANTHER PTHR10742:SF299 20 425 5.0E-119 T 22-04-2016 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 SUPERFAMILY SSF51905 397 425 7.34E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 SUPERFAMILY SSF51905 20 317 7.34E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 PRINTS PR00419 Adrenodoxin reductase family signature 42 55 9.7E-6 T 22-04-2016 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 PRINTS PR00419 Adrenodoxin reductase family signature 19 41 9.7E-6 T 22-04-2016 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 Gene3D G3DSA:3.50.50.60 20 140 7.9E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 Gene3D G3DSA:3.50.50.60 217 298 7.9E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS13400 23c84478845d9dd2f44b1c67595f06a2 433 PANTHER PTHR10742 20 425 5.0E-119 T 22-04-2016 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 PANTHER PTHR13847 1 394 2.1E-92 T 22-04-2016 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 SUPERFAMILY SSF51905 6 229 6.48E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 SUPERFAMILY SSF51905 324 388 6.48E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 PANTHER PTHR13847:SF44 1 394 2.1E-92 T 22-04-2016 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Pfam PF01266 FAD dependent oxidoreductase 8 363 3.2E-43 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.50.50.60 3 90 3.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.50.50.60 150 228 3.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.50.50.60 324 384 3.0E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.30.9.10 112 149 6.6E-8 T 22-04-2016 TMO_RS14650 50f0ce7d77feccb4bc731433bd898f5d 394 Gene3D G3DSA:3.30.9.10 229 321 6.6E-8 T 22-04-2016 TMO_RS02505 34136a1077cf65be45c205fd1cb4e148 83 Gene3D G3DSA:1.10.1200.10 2 81 1.8E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS02505 34136a1077cf65be45c205fd1cb4e148 83 SUPERFAMILY SSF47336 3 81 6.54E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS02505 34136a1077cf65be45c205fd1cb4e148 83 Pfam PF00550 Phosphopantetheine attachment site 9 75 2.6E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain TMO_RS08180 edfb5728e546820f529f2e1103677ce7 110 Pfam PF05957 Bacterial protein of unknown function (DUF883) 18 110 3.7E-17 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB TMO_RS06415 47f3ac7e40953147a69be9e251b8a1d7 202 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 40 166 4.7E-21 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 Gene3D G3DSA:3.40.50.2300 170 305 1.4E-18 T 22-04-2016 TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 SUPERFAMILY SSF53822 33 402 8.07E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 Gene3D G3DSA:3.40.50.2300 29 152 6.4E-22 T 22-04-2016 TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 Gene3D G3DSA:3.40.50.2300 306 357 6.4E-22 T 22-04-2016 TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 Pfam PF13458 Periplasmic binding protein 33 367 5.6E-80 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 PANTHER PTHR30483:SF17 8 404 2.1E-197 T 22-04-2016 TMO_RS02385 c1daa9d0d801b128aa4f3eb53f8cb0da 408 PANTHER PTHR30483 8 404 2.1E-197 T 22-04-2016 TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 PANTHER PTHR11807:SF2 10 204 1.5E-49 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 PANTHER PTHR11807 10 204 1.5E-49 T 22-04-2016 TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 206 1.2E-39 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 10 312 18.151 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 Pfam PF01171 PP-loop family 26 205 2.0E-41 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 Gene3D G3DSA:3.40.50.620 26 185 1.9E-13 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS04580 d07e89a38ef5d4f0de16f92489815a1e 493 SUPERFAMILY SSF52402 19 205 6.4E-41 T 22-04-2016 TMO_RS22505 fb1c4533652172420e2d54d104cb027d 400 PANTHER PTHR21666:SF221 210 400 8.0E-43 T 22-04-2016 TMO_RS22505 fb1c4533652172420e2d54d104cb027d 400 Pfam PF01551 Peptidase family M23 336 400 4.7E-22 T 22-04-2016 IPR016047 Peptidase M23 TMO_RS22505 fb1c4533652172420e2d54d104cb027d 400 PANTHER PTHR21666 210 400 8.0E-43 T 22-04-2016 TMO_RS22505 fb1c4533652172420e2d54d104cb027d 400 SUPERFAMILY SSF51261 195 400 1.88E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif TMO_RS22505 fb1c4533652172420e2d54d104cb027d 400 Gene3D G3DSA:2.70.70.10 298 400 1.1E-34 T 22-04-2016 TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 PANTHER PTHR33603 1 152 4.0E-41 T 22-04-2016 TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 Gene3D G3DSA:3.40.1280.10 2 152 2.9E-48 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 PIRSF PIRSF004505 1 152 1.6E-41 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 Pfam PF02590 Predicted SPOUT methyltransferase 1 151 7.8E-43 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 SUPERFAMILY SSF75217 1 150 4.24E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 PANTHER PTHR33603:SF1 1 152 4.0E-41 T 22-04-2016 TMO_RS14980 e11bd4cc3b71c8d4029d2690c94580db 153 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 152 26.959 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS02235 20b65320215d57a517372e314bdc2a6f 321 SUPERFAMILY SSF161098 37 298 1.14E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02235 20b65320215d57a517372e314bdc2a6f 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 300 2.5E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02235 20b65320215d57a517372e314bdc2a6f 321 PANTHER PTHR30193 9 314 2.7E-51 T 22-04-2016 TMO_RS02235 20b65320215d57a517372e314bdc2a6f 321 PANTHER PTHR30193:SF10 9 314 2.7E-51 T 22-04-2016 TMO_RS02235 20b65320215d57a517372e314bdc2a6f 321 Gene3D G3DSA:1.10.3720.10 29 292 4.0E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02955 fb3e9be3b5b2ba59e7514c431a4d7615 208 Pfam PF03741 Integral membrane protein TerC family 1 195 1.8E-41 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 TMO_RS02955 fb3e9be3b5b2ba59e7514c431a4d7615 208 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 1 195 1.2E-60 T 22-04-2016 IPR022301 Integral membrane protein YjbE TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 2.2E-58 T 22-04-2016 TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 SUPERFAMILY SSF51735 6 247 7.33E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PANTHER PTHR24322 155 186 1.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PANTHER PTHR24322 11 139 1.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 Gene3D G3DSA:3.40.50.720 2 247 3.6E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS14310 d204744e78a4316af1d895bc4d95ca9d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.6E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 487 196.846 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 PANTHER PTHR21343:SF1 1 484 1.3E-193 T 22-04-2016 TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 SUPERFAMILY SSF52317 253 444 8.25E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 436 2.1E-54 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 PANTHER PTHR21343 1 484 1.3E-193 T 22-04-2016 TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 SUPERFAMILY SSF52540 1 237 2.82E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 Gene3D G3DSA:3.40.50.880 253 441 9.5E-26 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 479 1.1E-133 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 Gene3D G3DSA:3.40.50.300 4 231 8.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS06830 60348ee64044c30a0a6fc7fffe636bdd 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 7.7E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain TMO_RS29470 53190ad22887b4550e6ce835b3eab19b 184 SUPERFAMILY SSF55729 2 170 6.65E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS29470 53190ad22887b4550e6ce835b3eab19b 184 Gene3D G3DSA:3.40.630.30 1 175 7.6E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS29470 53190ad22887b4550e6ce835b3eab19b 184 Pfam PF00583 Acetyltransferase (GNAT) family 61 151 2.0E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS29470 53190ad22887b4550e6ce835b3eab19b 184 PANTHER PTHR23091 93 171 1.4E-23 T 22-04-2016 TMO_RS29470 53190ad22887b4550e6ce835b3eab19b 184 PANTHER PTHR23091 1 76 1.4E-23 T 22-04-2016 TMO_RS11390 dfa124b46b761495cceb06a66afe2ca6 78 SUPERFAMILY SSF82657 1 77 1.15E-25 T 22-04-2016 IPR002634 BolA protein TMO_RS11390 dfa124b46b761495cceb06a66afe2ca6 78 Pfam PF01722 BolA-like protein 27 77 5.0E-16 T 22-04-2016 IPR002634 BolA protein TMO_RS11390 dfa124b46b761495cceb06a66afe2ca6 78 Gene3D G3DSA:3.30.300.90 1 77 5.2E-24 T 22-04-2016 IPR002634 BolA protein TMO_RS11390 dfa124b46b761495cceb06a66afe2ca6 78 PANTHER PTHR12735 7 77 1.3E-16 T 22-04-2016 TMO_RS11390 dfa124b46b761495cceb06a66afe2ca6 78 PIRSF PIRSF003113 1 78 7.0E-22 T 22-04-2016 IPR002634 BolA protein TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 Pfam PF00700 Bacterial flagellin C-terminal helical region 301 386 1.7E-22 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PANTHER PTHR30244 297 386 1.9E-79 T 22-04-2016 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PANTHER PTHR30244 2 245 1.9E-79 T 22-04-2016 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 76 95 1.8E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 37 54 1.8E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PRINTS PR00207 Flagellin signature 111 134 1.8E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 SUPERFAMILY SSF64518 1 386 3.27E-73 T 22-04-2016 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PANTHER PTHR30244:SF1 297 386 1.9E-79 T 22-04-2016 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 PANTHER PTHR30244:SF1 2 245 1.9E-79 T 22-04-2016 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 8.8E-33 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 Gene3D G3DSA:1.20.1330.10 240 343 3.5E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS05425 2e54940c133404a21570e2b23300c23a 387 Gene3D G3DSA:1.20.1330.10 55 140 3.5E-39 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 TMO_RS14730 5a28a036d88c0dbfc1d04ba0010450f7 97 PIRSF PIRSF028291 3 97 1.6E-26 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS14730 5a28a036d88c0dbfc1d04ba0010450f7 97 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 93 1.1E-28 T 22-04-2016 IPR014543 Uncharacterised conserved protein UCP028291 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 PANTHER PTHR35008 25 151 2.9E-21 T 22-04-2016 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 SUPERFAMILY SSF46626 24 134 3.89E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 130 6.4E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 Gene3D G3DSA:1.10.760.10 26 141 2.9E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 PRINTS PR00605 Class IC cytochrome C signature 47 58 3.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_RS15270 509f569c015adbeee39fc99bead3fa63 151 PRINTS PR00605 Class IC cytochrome C signature 108 130 3.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 Gene3D G3DSA:2.170.130.10 30 185 1.2E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 SUPERFAMILY SSF56935 31 715 2.98E-140 T 22-04-2016 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 713 9.4E-126 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 PANTHER PTHR32552 65 715 1.6E-178 T 22-04-2016 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 PANTHER PTHR32552 15 44 1.6E-178 T 22-04-2016 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 174 5.0E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 Pfam PF00593 TonB dependent receptor 482 714 6.5E-33 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 Gene3D G3DSA:2.40.170.20 191 715 8.3E-149 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 PANTHER PTHR32552:SF17 65 715 1.6E-178 T 22-04-2016 TMO_RS02005 8b498fc7e846bdf82b493ddb4d5cb76c 715 PANTHER PTHR32552:SF17 15 44 1.6E-178 T 22-04-2016 TMO_RS15450 f59afd6448f7237123d73180cd057654 356 PANTHER PTHR30482:SF5 1 353 5.1E-135 T 22-04-2016 TMO_RS15450 f59afd6448f7237123d73180cd057654 356 PANTHER PTHR30482 1 353 5.1E-135 T 22-04-2016 TMO_RS15450 f59afd6448f7237123d73180cd057654 356 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 4.7E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 SUPERFAMILY SSF54197 8 143 2.17E-27 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 9 25 3.2E-10 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 92 102 3.2E-10 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 PRINTS PR00332 Histidine triad family signature 30 48 3.2E-10 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 Gene3D G3DSA:3.30.428.10 7 142 3.5E-25 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 PANTHER PTHR23089:SF7 8 103 1.1E-18 T 22-04-2016 TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 Pfam PF01230 HIT domain 18 104 2.3E-12 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS15285 d924c1399ea96cc80217e20cf3371b8b 148 PANTHER PTHR23089 8 103 1.1E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein TMO_RS14930 0058ba242e3d7e00edf7a79b20f7b486 181 Pfam PF00857 Isochorismatase family 5 147 2.8E-42 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS14930 0058ba242e3d7e00edf7a79b20f7b486 181 SUPERFAMILY SSF52499 2 179 4.32E-56 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS14930 0058ba242e3d7e00edf7a79b20f7b486 181 PANTHER PTHR11080 4 178 1.7E-55 T 22-04-2016 TMO_RS14930 0058ba242e3d7e00edf7a79b20f7b486 181 Gene3D G3DSA:3.40.50.850 2 179 7.6E-57 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS14930 0058ba242e3d7e00edf7a79b20f7b486 181 PANTHER PTHR11080:SF35 4 178 1.7E-55 T 22-04-2016 TMO_RS03825 5ce0b8aaf4ad9858650a291b36b949e6 300 SUPERFAMILY SSF103481 48 145 9.55E-9 T 22-04-2016 TMO_RS03825 5ce0b8aaf4ad9858650a291b36b949e6 300 PANTHER PTHR22911 5 299 9.4E-23 T 22-04-2016 TMO_RS03825 5ce0b8aaf4ad9858650a291b36b949e6 300 SUPERFAMILY SSF103481 203 299 5.36E-9 T 22-04-2016 TMO_RS03825 5ce0b8aaf4ad9858650a291b36b949e6 300 PANTHER PTHR22911:SF65 5 299 9.4E-23 T 22-04-2016 TMO_RS03825 5ce0b8aaf4ad9858650a291b36b949e6 300 Pfam PF00892 EamA-like transporter family 159 298 1.2E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS14150 90a333f8d80084c7cb944f74811703a9 227 PANTHER PTHR23427 5 225 1.6E-59 T 22-04-2016 TMO_RS14150 90a333f8d80084c7cb944f74811703a9 227 PANTHER PTHR23427:SF2 5 225 1.6E-59 T 22-04-2016 TMO_RS14150 90a333f8d80084c7cb944f74811703a9 227 Pfam PF02104 SURF1 family 3 214 9.8E-44 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 TMO_RS25045 8303ab2990bada9847dfe5961adb0b11 263 SUPERFAMILY SSF103473 2 262 4.58E-22 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS25045 8303ab2990bada9847dfe5961adb0b11 263 PANTHER PTHR12778 3 261 4.7E-21 T 22-04-2016 TMO_RS25045 8303ab2990bada9847dfe5961adb0b11 263 Pfam PF07690 Major Facilitator Superfamily 3 214 2.2E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS25045 8303ab2990bada9847dfe5961adb0b11 263 Gene3D G3DSA:1.20.1250.20 2 73 8.5E-6 T 22-04-2016 TMO_RS25045 8303ab2990bada9847dfe5961adb0b11 263 Gene3D G3DSA:1.20.1250.20 95 261 2.0E-4 T 22-04-2016 TMO_RS00850 1465767659ba046a5cc2db903addb321 558 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 63 290 3.5E-6 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_RS00850 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.130.10.10 42 171 4.7E-10 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 TMO_RS00850 1465767659ba046a5cc2db903addb321 558 SUPERFAMILY SSF63829 342 557 2.94E-25 T 22-04-2016 TMO_RS00850 1465767659ba046a5cc2db903addb321 558 SUPERFAMILY SSF63825 37 154 1.05E-26 T 22-04-2016 TMO_RS00850 1465767659ba046a5cc2db903addb321 558 SUPERFAMILY SSF63825 195 298 1.05E-26 T 22-04-2016 TMO_RS00850 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.120.10.30 196 397 8.0E-18 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS00850 1465767659ba046a5cc2db903addb321 558 Gene3D G3DSA:2.120.10.30 398 556 2.2E-18 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS01260 be6f3ab8233f5959d6e639cc30e7e64b 83 Pfam PF06568 Domain of unknown function (DUF1127) 38 65 1.7E-5 T 22-04-2016 IPR009506 Protein of unknown function DUF1127 TMO_RS17765 b7bba9e36c4c72ed48e64e6179015589 140 Pfam PF05443 ROS/MUCR transcriptional regulator protein 9 132 1.3E-51 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 TMO_RS04695 da5442aad0dc75a65eb678370251df36 76 Gene3D G3DSA:2.10.260.10 1 62 2.1E-5 T 22-04-2016 TMO_RS04695 da5442aad0dc75a65eb678370251df36 76 SUPERFAMILY SSF89447 4 65 1.73E-7 T 22-04-2016 TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 SUPERFAMILY SSF52833 6 117 2.21E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 Gene3D G3DSA:3.40.30.10 5 117 4.3E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 PANTHER PTHR30041 4 113 1.1E-37 T 22-04-2016 TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 Pfam PF03960 ArsC family 10 115 2.2E-15 T 22-04-2016 IPR006660 Arsenate reductase-like TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 6 116 1.1E-35 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 TMO_RS17435 dedddfb280492441b5a193c9cb3f36aa 117 PANTHER PTHR30041:SF4 4 113 1.1E-37 T 22-04-2016 TMO_RS09240 fabf0d43a285e1e121fc7034c87a6edf 379 Pfam PF01594 Domain of unknown function DUF20 11 338 2.7E-52 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like TMO_RS09240 fabf0d43a285e1e121fc7034c87a6edf 379 PANTHER PTHR21716 2 352 2.4E-60 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 PANTHER PTHR12903 4 105 6.9E-48 T 22-04-2016 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 SMART SM00739 4 31 9.6E-5 T 22-04-2016 IPR005824 KOW TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 21.412 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 Pfam PF00467 KOW motif 7 37 9.8E-7 T 22-04-2016 IPR005824 KOW TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 Gene3D G3DSA:2.30.30.30 3 92 5.3E-27 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 103 2.4E-26 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.3E-38 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13200 f54c186cf0433858a9b440e47f4245ce 105 SUPERFAMILY SSF50104 4 101 1.47E-34 T 22-04-2016 IPR008991 Translation protein SH3-like domain TMO_RS06335 07befdaf96f5520731be9122607f457f 358 Pfam PF10005 zinc-ribbon domain 3 94 5.4E-34 T 22-04-2016 IPR011201 Zinc-ribbon domain, bacteria TMO_RS06335 07befdaf96f5520731be9122607f457f 358 PIRSF PIRSF012641 1 358 8.1E-154 T 22-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TMO_RS06335 07befdaf96f5520731be9122607f457f 358 Pfam PF15887 Putative zinc-binding metallo-peptidase 98 352 9.5E-111 T 22-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase TMO_RS11980 d78ae96f88b1ae0377524f7102810f64 171 Pfam PF05069 Phage virion morphogenesis family 10 162 7.6E-26 T 22-04-2016 IPR006522 Phage virion morphogensis protein TMO_RS11980 d78ae96f88b1ae0377524f7102810f64 171 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 161 1.7E-11 T 22-04-2016 IPR006522 Phage virion morphogensis protein TMO_RS19515 7bc8714eb9c7c72ef1d4aaa277d6be5d 169 Gene3D G3DSA:3.10.580.10 29 168 5.5E-19 T 22-04-2016 TMO_RS19515 7bc8714eb9c7c72ef1d4aaa277d6be5d 169 PANTHER PTHR22777 26 169 6.5E-58 T 22-04-2016 TMO_RS19515 7bc8714eb9c7c72ef1d4aaa277d6be5d 169 SUPERFAMILY SSF54631 30 169 4.03E-31 T 22-04-2016 TMO_RS19515 7bc8714eb9c7c72ef1d4aaa277d6be5d 169 Pfam PF00571 CBS domain 43 100 7.0E-4 T 22-04-2016 IPR000644 CBS domain TMO_RS19515 7bc8714eb9c7c72ef1d4aaa277d6be5d 169 Pfam PF00571 CBS domain 121 166 2.0E-6 T 22-04-2016 IPR000644 CBS domain TMO_RS29450 bc6f46d02faa63b6aa7786e8850f7621 1388 Gene3D G3DSA:3.20.20.80 474 792 1.5E-11 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 TMO_RS29450 bc6f46d02faa63b6aa7786e8850f7621 1388 SUPERFAMILY SSF51445 476 790 3.86E-15 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Pfam PF13450 NAD(P)-binding Rossmann-like domain 17 75 2.1E-12 T 22-04-2016 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.90.660.10 214 311 1.5E-36 T 22-04-2016 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.90.660.10 64 127 1.5E-36 T 22-04-2016 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.50.50.60 16 51 4.7E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.50.50.60 133 213 4.7E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Gene3D G3DSA:3.50.50.60 313 350 4.7E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 SUPERFAMILY SSF51905 316 350 9.25E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 SUPERFAMILY SSF51905 16 228 9.25E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 PANTHER PTHR16128 15 350 8.5E-61 T 22-04-2016 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 PANTHER PTHR16128:SF5 15 350 8.5E-61 T 22-04-2016 TMO_RS10445 7ec4ee0992e2fb7081f611224a4135a4 351 Pfam PF01593 Flavin containing amine oxidoreductase 122 349 2.3E-12 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_RS11845 b37fcfbb1b515bbd3c533aa79725aa92 291 Gene3D G3DSA:3.40.630.30 1 93 3.0E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS11845 b37fcfbb1b515bbd3c533aa79725aa92 291 SUPERFAMILY SSF55729 1 94 4.75E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 PANTHER PTHR30472 78 381 2.6E-112 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 PANTHER PTHR30472:SF3 78 381 2.6E-112 T 22-04-2016 TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 PANTHER PTHR30472:SF3 1 62 2.6E-112 T 22-04-2016 TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 Gene3D G3DSA:1.10.3470.10 22 376 1.2E-94 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 PANTHER PTHR30472 1 62 2.6E-112 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 SUPERFAMILY SSF81345 23 374 5.75E-75 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS06710 934f99f2b9c4277b7ff08102d4ea039c 382 Pfam PF01032 FecCD transport family 41 374 1.2E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 TMO_RS05550 2dbd202b839e62663b0f780c9419bfae 271 Gene3D G3DSA:1.25.60.10 183 242 8.3E-6 T 22-04-2016 TMO_RS05550 2dbd202b839e62663b0f780c9419bfae 271 SUPERFAMILY SSF158791 176 241 1.31E-6 T 22-04-2016 TMO_RS07610 e7c3bbd72a526802510cf72539547244 418 PANTHER PTHR30386 1 330 1.9E-24 T 22-04-2016 TMO_RS07610 e7c3bbd72a526802510cf72539547244 418 Pfam PF13437 HlyD family secretion protein 251 335 2.5E-8 T 22-04-2016 TMO_RS07610 e7c3bbd72a526802510cf72539547244 418 TIGRFAM TIGR03794 NHLM_micro_HlyD: NHLM bacteriocin system secretion protein 14 413 2.6E-82 T 22-04-2016 IPR022275 NHPM bacteriocin system secretion protein, HylD TMO_RS07610 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.50.100 249 280 2.8E-7 T 22-04-2016 TMO_RS07610 e7c3bbd72a526802510cf72539547244 418 Gene3D G3DSA:2.40.50.100 80 105 2.8E-7 T 22-04-2016 TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 PANTHER PTHR10362:SF7 26 515 1.2E-149 T 22-04-2016 TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 Gene3D G3DSA:1.10.275.10 31 214 2.2E-56 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 Gene3D G3DSA:1.20.200.10 215 513 1.9E-88 T 22-04-2016 TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 SUPERFAMILY SSF48557 30 513 1.18E-145 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 Pfam PF00221 Aromatic amino acid lyase 33 489 3.8E-147 T 22-04-2016 IPR001106 Aromatic amino acid lyase TMO_RS14865 330df2b0dfc4459afd34b93f6bb05334 516 PANTHER PTHR10362 26 515 1.2E-149 T 22-04-2016 TMO_RS12265 b3040818732d6654a8b075f2c5bf114a 387 SUPERFAMILY SSF53474 221 310 2.81E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS12265 b3040818732d6654a8b075f2c5bf114a 387 Gene3D G3DSA:3.40.50.1820 221 284 2.2E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS06005 3d1975b03feb5d965d4687c074c6cdac 230 PANTHER PTHR11080:SF19 2 229 3.6E-98 T 22-04-2016 TMO_RS06005 3d1975b03feb5d965d4687c074c6cdac 230 PANTHER PTHR11080 2 229 3.6E-98 T 22-04-2016 TMO_RS06005 3d1975b03feb5d965d4687c074c6cdac 230 SUPERFAMILY SSF52499 12 224 6.8E-58 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS06005 3d1975b03feb5d965d4687c074c6cdac 230 Pfam PF00857 Isochorismatase family 27 216 7.9E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS06005 3d1975b03feb5d965d4687c074c6cdac 230 Gene3D G3DSA:3.40.50.850 7 229 8.1E-69 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS29050 b08c649fefca8098dcb8d8034436c65e 116 Pfam PF05164 Cell division protein ZapA 4 106 3.7E-15 T 22-04-2016 IPR007838 Cell division protein ZapA-like TMO_RS29050 b08c649fefca8098dcb8d8034436c65e 116 SUPERFAMILY SSF102829 4 87 3.4E-15 T 22-04-2016 IPR007838 Cell division protein ZapA-like TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 SUPERFAMILY SSF47240 29 160 1.03E-19 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 8 192 27.314 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 PANTHER PTHR11237:SF4 25 192 1.7E-80 T 22-04-2016 TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 PANTHER PTHR11237 25 192 1.7E-80 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 Gene3D G3DSA:1.20.1260.10 37 157 8.9E-7 T 22-04-2016 IPR012347 Ferritin-related TMO_RS16020 ec2bc8fbc01ad9c2a3ae83a16061d7dc 192 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 28 191 1.8E-65 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 TMO_RS12465 3c193552e202561f1f97e652f6c207b7 313 SUPERFAMILY SSF53850 27 308 1.67E-54 T 22-04-2016 TMO_RS12465 3c193552e202561f1f97e652f6c207b7 313 PANTHER PTHR31528 1 308 8.4E-90 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 TMO_RS12465 3c193552e202561f1f97e652f6c207b7 313 Gene3D G3DSA:3.40.190.10 111 219 5.5E-17 T 22-04-2016 TMO_RS12465 3c193552e202561f1f97e652f6c207b7 313 PANTHER PTHR31528:SF5 1 308 8.4E-90 T 22-04-2016 TMO_RS12465 3c193552e202561f1f97e652f6c207b7 313 Pfam PF09084 NMT1/THI5 like 35 246 2.9E-72 T 22-04-2016 IPR015168 SsuA/THI5-like TMO_RS10110 0c66940959a79f9df90758eb34eae13b 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 305 2.5E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS10110 0c66940959a79f9df90758eb34eae13b 351 PANTHER PTHR30482 5 307 3.9E-112 T 22-04-2016 TMO_RS10110 0c66940959a79f9df90758eb34eae13b 351 PANTHER PTHR30482 323 351 3.9E-112 T 22-04-2016 TMO_RS10110 0c66940959a79f9df90758eb34eae13b 351 PANTHER PTHR30482:SF2 5 307 3.9E-112 T 22-04-2016 TMO_RS10110 0c66940959a79f9df90758eb34eae13b 351 PANTHER PTHR30482:SF2 323 351 3.9E-112 T 22-04-2016 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:3.20.20.140 72 361 2.5E-86 T 22-04-2016 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 PANTHER PTHR11271:SF33 15 419 3.5E-116 T 22-04-2016 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 SUPERFAMILY SSF51338 8 70 3.28E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 SUPERFAMILY SSF51338 375 417 3.28E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:2.30.40.10 362 385 1.0E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 Pfam PF01979 Amidohydrolase family 66 415 1.6E-41 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 SUPERFAMILY SSF51556 70 373 4.74E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 PANTHER PTHR11271 15 419 3.5E-116 T 22-04-2016 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:2.30.40.10 386 417 5.0E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS01700 2cfaf1a84d71bdcde89d4e02e2499579 419 Gene3D G3DSA:2.30.40.10 12 71 5.0E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS18795 aead3b1d07731b1018cb0069f381f634 107 PANTHER PTHR22911:SF41 2 107 6.9E-37 T 22-04-2016 TMO_RS18795 aead3b1d07731b1018cb0069f381f634 107 PANTHER PTHR22911 2 107 6.9E-37 T 22-04-2016 TMO_RS18795 aead3b1d07731b1018cb0069f381f634 107 Pfam PF00892 EamA-like transporter family 2 107 6.9E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS18795 aead3b1d07731b1018cb0069f381f634 107 SUPERFAMILY SSF103481 30 107 2.75E-7 T 22-04-2016 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 SUPERFAMILY SSF103481 58 160 6.8E-11 T 22-04-2016 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 SUPERFAMILY SSF103481 207 306 2.48E-12 T 22-04-2016 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 PANTHER PTHR12715 27 307 2.2E-75 T 22-04-2016 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 PANTHER PTHR12715:SF17 27 307 2.2E-75 T 22-04-2016 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 Pfam PF00892 EamA-like transporter family 169 302 8.6E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS17510 3bc472ceabbb01a4f329e5146a25bfaa 307 Pfam PF00892 EamA-like transporter family 27 157 1.8E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07535 96a9bee7f778e70aa3fccd4ee63b5704 68 SMART SM00530 6 62 5.4E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS07535 96a9bee7f778e70aa3fccd4ee63b5704 68 Gene3D G3DSA:1.10.260.40 1 66 5.1E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS07535 96a9bee7f778e70aa3fccd4ee63b5704 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.0E-22 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS07535 96a9bee7f778e70aa3fccd4ee63b5704 68 PANTHER PTHR37301 2 67 1.0E-32 T 22-04-2016 TMO_RS07535 96a9bee7f778e70aa3fccd4ee63b5704 68 SUPERFAMILY SSF47413 1 66 2.03E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 SMART SM00530 48 103 6.5E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 Pfam PF01381 Helix-turn-helix 49 101 1.4E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 SUPERFAMILY SSF47413 42 111 1.18E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 PANTHER PTHR10245:SF38 16 106 7.3E-19 T 22-04-2016 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 Gene3D G3DSA:1.10.260.40 41 114 2.9E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS29675 9daf1ab67d86e0c9a33ca8f4d9c0335e 181 PANTHER PTHR10245 16 106 7.3E-19 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 PANTHER PTHR10617 5 348 5.3E-61 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 SUPERFAMILY SSF51905 4 178 4.31E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 SUPERFAMILY SSF51905 284 365 4.31E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 Gene3D G3DSA:3.30.9.10 208 280 7.0E-5 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 PANTHER PTHR10617:SF113 5 348 5.3E-61 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 4.2E-11 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.2E-11 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 4.2E-11 T 22-04-2016 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 Pfam PF01494 FAD binding domain 4 320 1.6E-30 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 Gene3D G3DSA:3.50.50.60 286 323 1.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS03040 36208d21a8522e948b75a50f15658f11 574 Gene3D G3DSA:3.50.50.60 5 181 1.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00695 2c4059356294363e4449f846caf773e7 206 PANTHER PTHR30336 1 179 7.7E-18 T 22-04-2016 TMO_RS00695 2c4059356294363e4449f846caf773e7 206 Pfam PF02698 DUF218 domain 39 155 1.9E-10 T 22-04-2016 IPR003848 Domain of unknown function DUF218 TMO_RS00695 2c4059356294363e4449f846caf773e7 206 Gene3D G3DSA:3.40.50.620 102 151 1.4E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS00695 2c4059356294363e4449f846caf773e7 206 PANTHER PTHR30336:SF1 1 179 7.7E-18 T 22-04-2016 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 8 263 18.995 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 261 1.4E-67 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 PANTHER PTHR30589 1 265 8.0E-90 T 22-04-2016 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 PANTHER PTHR30589:SF0 1 265 8.0E-90 T 22-04-2016 TMO_RS01615 75eddbce174aead266168bcba81ac474 272 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 257 1.8E-77 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 PANTHER PTHR31793 1 136 5.0E-30 T 22-04-2016 TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 Pfam PF03061 Thioesterase superfamily 24 103 3.0E-13 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 122 2.8E-22 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 PANTHER PTHR31793:SF9 1 136 5.0E-30 T 22-04-2016 TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 SUPERFAMILY SSF54637 2 136 1.21E-35 T 22-04-2016 IPR029069 HotDog domain TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 Gene3D G3DSA:3.10.129.10 5 136 4.1E-37 T 22-04-2016 IPR029069 HotDog domain TMO_RS15950 6931df911bf1df32e4a28249e3ab7896 141 PIRSF PIRSF003230 2 139 5.8E-25 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 Pfam PF07690 Major Facilitator Superfamily 30 368 2.9E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 Gene3D G3DSA:1.20.1250.20 223 397 8.5E-9 T 22-04-2016 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 SUPERFAMILY SSF103473 13 398 7.06E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 Gene3D G3DSA:1.20.1250.20 23 207 2.0E-27 T 22-04-2016 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 PANTHER PTHR23502:SF19 23 397 1.7E-79 T 22-04-2016 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 77 93 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 PANTHER PTHR23502 23 397 1.7E-79 T 22-04-2016 TMO_RS01145 2440233aa482eed07dbc19a394640bf9 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 24 387 8.5E-69 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS00600 af6ce6f6767f2a63283c0c01af24abf6 661 PANTHER PTHR30047 1 656 6.2E-252 T 22-04-2016 TMO_RS00600 af6ce6f6767f2a63283c0c01af24abf6 661 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 493 5.8E-165 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 TMO_RS00600 af6ce6f6767f2a63283c0c01af24abf6 661 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 492 1.0E-194 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 TMO_RS00600 af6ce6f6767f2a63283c0c01af24abf6 661 ProSitePatterns PS01303 BCCT family of transporters signature. 310 319 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 TMO_RS00600 af6ce6f6767f2a63283c0c01af24abf6 661 PANTHER PTHR30047:SF2 1 656 6.2E-252 T 22-04-2016 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 PANTHER PTHR32248:SF4 85 260 2.0E-27 T 22-04-2016 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 PANTHER PTHR32248:SF4 1 65 2.0E-27 T 22-04-2016 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 1 38 3.4E-14 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 PANTHER PTHR32248 85 260 2.0E-27 T 22-04-2016 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 PANTHER PTHR32248 1 65 2.0E-27 T 22-04-2016 TMO_RS18725 3460994d85d1902b560fb188236d893d 262 Pfam PF04963 Sigma-54 factor, core binding domain 146 260 2.3E-23 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 PANTHER PTHR23416 1 254 2.9E-114 T 22-04-2016 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 19 47 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 PANTHER PTHR23416:SF8 1 254 2.9E-114 T 22-04-2016 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 263 43.685 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 259 1.3E-21 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Gene3D G3DSA:1.20.1180.10 196 260 8.4E-18 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 SUPERFAMILY SSF51161 3 253 1.79E-69 T 22-04-2016 IPR011004 Trimeric LpxA-like TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 261 3.2E-101 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 51 4.0E-9 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 1.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 PIRSF PIRSF000456 3 270 2.3E-100 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 TMO_RS08895 e39aaba0033bcdda258bb8b9c34f0284 274 Gene3D G3DSA:2.160.10.10 5 191 5.1E-45 T 22-04-2016 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 PANTHER PTHR30085:SF1 260 401 6.8E-153 T 22-04-2016 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 PANTHER PTHR30085:SF1 1 181 6.8E-153 T 22-04-2016 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Gene3D G3DSA:1.10.3720.10 91 160 4.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Gene3D G3DSA:1.10.3720.10 268 396 4.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Gene3D G3DSA:1.10.3720.10 234 235 4.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 SUPERFAMILY SSF161098 193 382 4.97E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 232 396 1.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 SUPERFAMILY SSF161098 92 212 1.6E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 PANTHER PTHR30085 260 401 6.8E-153 T 22-04-2016 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 PANTHER PTHR30085 1 181 6.8E-153 T 22-04-2016 TMO_RS12660 b7c2a69a46ed7052914f68c9bf8c8ad7 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 1.8E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 TMO_RS17115 ca226652fd26a452daaf2b27c0cfbeb7 294 PANTHER PTHR14194 1 283 6.1E-47 T 22-04-2016 TMO_RS17115 ca226652fd26a452daaf2b27c0cfbeb7 294 SUPERFAMILY SSF51735 2 253 6.12E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS17115 ca226652fd26a452daaf2b27c0cfbeb7 294 Pfam PF05368 NmrA-like family 3 221 2.7E-28 T 22-04-2016 IPR008030 NmrA-like domain TMO_RS17115 ca226652fd26a452daaf2b27c0cfbeb7 294 Gene3D G3DSA:3.40.50.720 1 219 6.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16895 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 SUPERFAMILY SSF55729 6 137 1.42E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16895 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 Gene3D G3DSA:3.40.630.30 2 147 3.7E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS16895 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 PANTHER PTHR10545:SF39 3 147 4.0E-57 T 22-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 TMO_RS16895 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 PANTHER PTHR10545 3 147 4.0E-57 T 22-04-2016 TMO_RS16895 2dfa487dc01c7b37e41ecc79f4e4ab7d 150 Pfam PF00583 Acetyltransferase (GNAT) family 58 137 9.0E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:2.40.50.100 87 120 5.6E-14 T 22-04-2016 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 Gene3D G3DSA:2.40.50.100 181 212 5.6E-14 T 22-04-2016 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 PANTHER PTHR30469 15 376 1.8E-50 T 22-04-2016 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 363 1.0E-48 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 SUPERFAMILY SSF111369 78 289 1.96E-28 T 22-04-2016 TMO_RS05865 48547fde9aca8b7940cf5640f0d68b4b 408 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 283 2.8E-27 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 Gene3D G3DSA:3.40.50.2300 39 155 7.7E-30 T 22-04-2016 TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 SUPERFAMILY SSF53822 39 311 8.95E-59 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 Gene3D G3DSA:3.40.50.2300 156 289 3.8E-32 T 22-04-2016 TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 PANTHER PTHR32196 51 286 1.5E-26 T 22-04-2016 TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 PANTHER PTHR32196:SF9 51 286 1.5E-26 T 22-04-2016 TMO_RS06490 fd76c597533ba7d42dd21501a3afbca4 345 Pfam PF13407 Periplasmic binding protein domain 49 288 9.3E-51 T 22-04-2016 IPR025997 Periplasmic binding protein TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 SMART SM00833 255 348 1.8E-4 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 Gene3D G3DSA:3.40.50.300 6 228 3.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 344 9.8E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 212 7.9E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 PANTHER PTHR13748:SF10 1 344 2.4E-132 T 22-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 SUPERFAMILY SSF90002 255 345 1.44E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 344 3.4E-163 T 22-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 PANTHER PTHR13748 1 344 2.4E-132 T 22-04-2016 TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 Gene3D G3DSA:3.30.1220.10 232 344 2.2E-24 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal TMO_RS13915 208748cfcd63744b97888d2ec920a76a 350 SUPERFAMILY SSF52540 6 229 4.18E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 2.3E-10 T 22-04-2016 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.3E-10 T 22-04-2016 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 322 2.3E-10 T 22-04-2016 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 SUPERFAMILY SSF51905 302 378 3.22E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 SUPERFAMILY SSF51905 8 168 3.22E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 Gene3D G3DSA:3.50.50.60 9 170 9.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 Gene3D G3DSA:3.50.50.60 295 350 9.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 PANTHER PTHR13789 9 377 4.8E-46 T 22-04-2016 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 SUPERFAMILY SSF54373 168 300 2.55E-37 T 22-04-2016 TMO_RS11000 ef0acd0c25334f293f3b6b703f66a4c5 381 PANTHER PTHR13789:SF107 9 377 4.8E-46 T 22-04-2016 TMO_RS12780 81417f087867105850c568c043751aa8 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 1.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS12780 81417f087867105850c568c043751aa8 198 SUPERFAMILY SSF46689 3 72 6.98E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS12780 81417f087867105850c568c043751aa8 198 Gene3D G3DSA:1.10.357.10 2 178 5.2E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619:SF1 592 793 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619:SF1 109 448 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619:SF1 536 571 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.30.1950.10 139 199 7.9E-4 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Pfam PF02563 Polysaccharide biosynthesis/export protein 131 192 3.0E-7 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 621 675 3.3E-13 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 733 760 3.3E-13 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 206 284 1.8E-15 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 761 816 2.0E-8 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 540 620 2.1E-10 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Gene3D G3DSA:3.10.560.10 285 329 2.2E-4 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619 592 793 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619 109 448 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 PANTHER PTHR33619 536 571 1.3E-53 T 22-04-2016 TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Pfam PF10531 SLBB domain 540 583 1.2E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Pfam PF10531 SLBB domain 294 332 0.0089 T 22-04-2016 IPR019554 Soluble ligand binding domain TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Pfam PF10531 SLBB domain 211 262 1.7E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain TMO_RS03600 c2ea0f3f4c37e77116a6f026d7dfa4ec 876 Pfam PF06251 Capsule biosynthesis GfcC 645 845 6.5E-16 T 22-04-2016 IPR010425 Domain of unknown function DUF1017 TMO_RS13750 f3f0a3b70a21335505d3fe90a5559abc 585 SUPERFAMILY SSF53187 324 456 1.06E-17 T 22-04-2016 TMO_RS13750 f3f0a3b70a21335505d3fe90a5559abc 585 Gene3D G3DSA:3.40.630.10 322 449 6.7E-14 T 22-04-2016 TMO_RS02910 a46dc05745dce7550d0956f9843c22e7 359 Gene3D G3DSA:3.20.20.70 37 245 1.5E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS02910 a46dc05745dce7550d0956f9843c22e7 359 SUPERFAMILY SSF102114 41 256 3.01E-12 T 22-04-2016 TMO_RS05520 05a89240afa86ecb1068e50bc15f9d60 330 Pfam PF13144 Chaperone for flagella basal body P-ring formation 168 320 4.3E-31 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TMO_RS05520 05a89240afa86ecb1068e50bc15f9d60 330 PANTHER PTHR36307 62 330 2.0E-29 T 22-04-2016 TMO_RS05520 05a89240afa86ecb1068e50bc15f9d60 330 SMART SM00858 197 259 7.6E-6 T 22-04-2016 IPR013974 SAF domain TMO_RS05520 05a89240afa86ecb1068e50bc15f9d60 330 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 189 320 4.2E-34 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 SMART SM00116 13 60 2.7E-8 T 22-04-2016 IPR000644 CBS domain TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 SMART SM00116 78 126 1.5E-7 T 22-04-2016 IPR000644 CBS domain TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 PANTHER PTHR11911 12 142 5.3E-32 T 22-04-2016 TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 Pfam PF00571 CBS domain 71 123 3.6E-12 T 22-04-2016 IPR000644 CBS domain TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 Pfam PF00571 CBS domain 13 60 2.9E-11 T 22-04-2016 IPR000644 CBS domain TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 Gene3D G3DSA:3.10.580.10 3 126 1.5E-32 T 22-04-2016 TMO_RS12300 6b7b44354f4b465fa60e1f97e1926ada 144 SUPERFAMILY SSF54631 1 141 6.06E-35 T 22-04-2016 TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 Pfam PF00005 ABC transporter 29 170 5.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 PANTHER PTHR24220 9 263 5.1E-122 T 22-04-2016 TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 Gene3D G3DSA:3.40.50.300 6 219 2.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 SUPERFAMILY SSF52540 8 226 1.03E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 29 258 2.2E-93 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 SMART SM00382 37 220 3.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS01660 cd4d1e615ce6b622b11654303266adb8 301 PANTHER PTHR24220:SF361 9 263 5.1E-122 T 22-04-2016 TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 79 94 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 Pfam PF00276 Ribosomal protein L23 8 93 6.3E-35 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 SUPERFAMILY SSF54189 5 95 1.69E-34 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 PANTHER PTHR11620 7 97 2.8E-32 T 22-04-2016 TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 Gene3D G3DSA:3.30.70.330 5 96 9.1E-38 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 TMO_RS13245 14bc679d810da5b6fc005087f9b4dc64 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 96 22.726 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 TMO_RS08405 b9ea03ce2656d880d47530239516ab29 216 PANTHER PTHR33217:SF2 2 192 9.1E-76 T 22-04-2016 TMO_RS08405 b9ea03ce2656d880d47530239516ab29 216 PANTHER PTHR33217 2 192 9.1E-76 T 22-04-2016 TMO_RS08405 b9ea03ce2656d880d47530239516ab29 216 Pfam PF00872 Transposase, Mutator family 3 192 1.6E-66 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_RS09125 e7cef6f862eae2d2ca61a5de973a23c8 201 PANTHER PTHR12184:SF2 12 137 6.0E-37 T 22-04-2016 TMO_RS09125 e7cef6f862eae2d2ca61a5de973a23c8 201 Pfam PF03981 Ubiquinol-cytochrome C chaperone 35 180 1.4E-41 T 22-04-2016 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 TMO_RS09125 e7cef6f862eae2d2ca61a5de973a23c8 201 PANTHER PTHR12184 12 137 6.0E-37 T 22-04-2016 IPR007129 Ubiquinol-cytochrome c chaperone, CBP3 TMO_RS09125 e7cef6f862eae2d2ca61a5de973a23c8 201 PIRSF PIRSF032079 1 187 4.7E-54 T 22-04-2016 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related TMO_RS12355 de06412d21c8de0f25c08f68283e158b 97 PANTHER PTHR12219 3 93 7.9E-30 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 TMO_RS12355 de06412d21c8de0f25c08f68283e158b 97 Pfam PF04800 ETC complex I subunit conserved region 3 95 2.2E-34 T 22-04-2016 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 TMO_RS12355 de06412d21c8de0f25c08f68283e158b 97 Gene3D G3DSA:3.30.160.190 1 79 3.4E-32 T 22-04-2016 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 SMART SM00388 143 212 1.6E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 PANTHER PTHR24423 8 50 6.5E-15 T 22-04-2016 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 PANTHER PTHR24423 70 313 6.5E-15 T 22-04-2016 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 211 5.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 Gene3D G3DSA:1.10.287.130 141 207 6.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS04775 3078ec41771114093330f3f6dc709254 388 SUPERFAMILY SSF47384 132 212 1.61E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS08265 0cbe59b768af87569ea57371c39db08f 322 PANTHER PTHR30482 7 321 9.2E-69 T 22-04-2016 TMO_RS08265 0cbe59b768af87569ea57371c39db08f 322 PANTHER PTHR30482:SF10 7 321 9.2E-69 T 22-04-2016 TMO_RS08265 0cbe59b768af87569ea57371c39db08f 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 302 1.6E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS04955 5689b6068e4eb28af422e6b362ef99b3 158 Pfam PF05433 Glycine zipper 2TM domain 29 70 8.4E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 TMO_RS04955 5689b6068e4eb28af422e6b362ef99b3 158 Pfam PF16998 17 kDa outer membrane surface antigen 71 156 4.8E-13 T 22-04-2016 IPR032635 Surface antigen domain TMO_RS04955 5689b6068e4eb28af422e6b362ef99b3 158 PIRSF PIRSF002721 2 157 4.0E-48 T 22-04-2016 IPR016364 Surface antigen, Rickettsia type TMO_RS11625 ea65dac7ad4b69e4f7bab5ec91726bd1 431 PANTHER PTHR33362 11 428 1.8E-129 T 22-04-2016 TMO_RS11625 ea65dac7ad4b69e4f7bab5ec91726bd1 431 PANTHER PTHR33362:SF5 11 428 1.8E-129 T 22-04-2016 TMO_RS11625 ea65dac7ad4b69e4f7bab5ec91726bd1 431 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 1.1E-87 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS11625 ea65dac7ad4b69e4f7bab5ec91726bd1 431 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 11 422 9.4E-88 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS11625 ea65dac7ad4b69e4f7bab5ec91726bd1 431 PIRSF PIRSF006066 6 431 2.4E-86 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS05395 85a309165a69b47f8daf1c2b26caa3a1 286 SMART SM01236 112 224 4.9E-5 T 22-04-2016 TMO_RS05395 85a309165a69b47f8daf1c2b26caa3a1 286 SUPERFAMILY SSF48613 35 272 1.24E-8 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS05395 85a309165a69b47f8daf1c2b26caa3a1 286 Gene3D G3DSA:1.20.910.10 33 273 1.5E-6 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS01795 4c334d44beaaaa1d0d163d6ff4537c75 278 PANTHER PTHR31620:SF8 24 238 2.8E-27 T 22-04-2016 TMO_RS01795 4c334d44beaaaa1d0d163d6ff4537c75 278 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 25 243 1.9E-55 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN TMO_RS01795 4c334d44beaaaa1d0d163d6ff4537c75 278 PANTHER PTHR31620 24 238 2.8E-27 T 22-04-2016 TMO_RS01795 4c334d44beaaaa1d0d163d6ff4537c75 278 SUPERFAMILY SSF159501 5 277 3.24E-54 T 22-04-2016 TMO_RS12890 35bba94c5bfe530c9881e808f73ecd5c 121 PANTHER PTHR24423 2 121 1.1E-37 T 22-04-2016 TMO_RS12890 35bba94c5bfe530c9881e808f73ecd5c 121 Gene3D G3DSA:3.40.50.2300 3 120 1.7E-37 T 22-04-2016 TMO_RS12890 35bba94c5bfe530c9881e808f73ecd5c 121 SMART SM00448 3 116 4.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS12890 35bba94c5bfe530c9881e808f73ecd5c 121 SUPERFAMILY SSF52172 3 121 3.98E-36 T 22-04-2016 IPR011006 CheY-like superfamily TMO_RS12890 35bba94c5bfe530c9881e808f73ecd5c 121 Pfam PF00072 Response regulator receiver domain 5 115 7.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 TMO_RS16900 424f48ba021ded7cd8c83813072a6e90 307 SUPERFAMILY SSF103481 218 293 9.55E-9 T 22-04-2016 TMO_RS16900 424f48ba021ded7cd8c83813072a6e90 307 Pfam PF00892 EamA-like transporter family 159 291 1.9E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS16900 424f48ba021ded7cd8c83813072a6e90 307 Pfam PF00892 EamA-like transporter family 19 148 1.9E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS16900 424f48ba021ded7cd8c83813072a6e90 307 SUPERFAMILY SSF103481 51 149 1.83E-13 T 22-04-2016 TMO_RS16900 424f48ba021ded7cd8c83813072a6e90 307 PANTHER PTHR12715 14 307 6.2E-45 T 22-04-2016 TMO_RS13945 d2142a1398e476cae5318cc4459855b2 298 Pfam PF00892 EamA-like transporter family 147 277 1.6E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS13945 d2142a1398e476cae5318cc4459855b2 298 SUPERFAMILY SSF103481 184 281 7.85E-10 T 22-04-2016 TMO_RS13945 d2142a1398e476cae5318cc4459855b2 298 PANTHER PTHR22911 10 285 8.9E-91 T 22-04-2016 TMO_RS13945 d2142a1398e476cae5318cc4459855b2 298 PANTHER PTHR22911:SF37 10 285 8.9E-91 T 22-04-2016 TMO_RS13945 d2142a1398e476cae5318cc4459855b2 298 SUPERFAMILY SSF103481 45 135 3.92E-6 T 22-04-2016 TMO_RS15480 95aa2b7e63b176b8288e68219d586ddd 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 3.5E-87 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS15480 95aa2b7e63b176b8288e68219d586ddd 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 428 1.4E-77 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS15480 95aa2b7e63b176b8288e68219d586ddd 438 PIRSF PIRSF006066 5 438 2.8E-75 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS15480 95aa2b7e63b176b8288e68219d586ddd 438 PANTHER PTHR33362 4 436 2.1E-87 T 22-04-2016 TMO_RS15480 95aa2b7e63b176b8288e68219d586ddd 438 PANTHER PTHR33362:SF7 4 436 2.1E-87 T 22-04-2016 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 Pfam PF00311 Phosphoenolpyruvate carboxylase 1 162 1.4E-75 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 PANTHER PTHR30523 1 163 2.8E-81 T 22-04-2016 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 64 84 1.3E-20 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 106 135 1.3E-20 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 66 78 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 SUPERFAMILY SSF51621 1 162 2.04E-70 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS29780 10ea248fbd368d9235a0bf3b466fc983 163 PANTHER PTHR30523:SF0 1 163 2.8E-81 T 22-04-2016 TMO_RS09080 b7ad6491817f9a7d52c0f10053bbd950 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 2.6E-32 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 TMO_RS09080 b7ad6491817f9a7d52c0f10053bbd950 107 PANTHER PTHR23419:SF0 6 104 7.8E-34 T 22-04-2016 TMO_RS09080 b7ad6491817f9a7d52c0f10053bbd950 107 PANTHER PTHR23419 6 104 7.8E-34 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 TMO_RS09080 b7ad6491817f9a7d52c0f10053bbd950 107 SUPERFAMILY SSF54913 4 106 1.0E-33 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta TMO_RS09080 b7ad6491817f9a7d52c0f10053bbd950 107 Gene3D G3DSA:3.30.70.830 4 106 2.5E-35 T 22-04-2016 TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 62 6.9E-17 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 Pfam PF00691 OmpA family 133 215 5.8E-11 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 SUPERFAMILY SSF103088 122 239 1.16E-17 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 PANTHER PTHR30329:SF4 18 245 3.0E-28 T 22-04-2016 TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 Gene3D G3DSA:3.30.1330.60 115 239 2.0E-18 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS05570 1e7bb0ee19527808be8dd4a369d9f944 249 PANTHER PTHR30329 18 245 3.0E-28 T 22-04-2016 TMO_RS02800 4313c41f25ef3acb5fe2a7c912670f03 145 PANTHER PTHR31793:SF7 1 144 7.2E-59 T 22-04-2016 TMO_RS02800 4313c41f25ef3acb5fe2a7c912670f03 145 PANTHER PTHR31793 1 144 7.2E-59 T 22-04-2016 TMO_RS02800 4313c41f25ef3acb5fe2a7c912670f03 145 Pfam PF03061 Thioesterase superfamily 28 110 2.2E-12 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS02800 4313c41f25ef3acb5fe2a7c912670f03 145 SUPERFAMILY SSF54637 9 143 7.09E-39 T 22-04-2016 IPR029069 HotDog domain TMO_RS02800 4313c41f25ef3acb5fe2a7c912670f03 145 Gene3D G3DSA:3.10.129.10 4 144 1.5E-50 T 22-04-2016 IPR029069 HotDog domain TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 PIRSF PIRSF001434 2 389 1.2E-117 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 SUPERFAMILY SSF53383 37 387 2.33E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Gene3D G3DSA:3.40.640.10 13 258 6.2E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 PANTHER PTHR11808 6 390 2.8E-136 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Gene3D G3DSA:3.90.1150.10 260 388 1.4E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS03780 9c43f8eb3d2d14182dc0f1e7e916b44d 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 15 385 3.6E-104 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 TMO_RS13800 97318c932b83078e4b485e9b5f3df12b 278 PANTHER PTHR30477:SF9 4 268 5.0E-116 T 22-04-2016 TMO_RS13800 97318c932b83078e4b485e9b5f3df12b 278 SUPERFAMILY SSF81345 5 263 8.76E-35 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS13800 97318c932b83078e4b485e9b5f3df12b 278 Pfam PF00950 ABC 3 transport family 13 267 5.2E-74 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 TMO_RS13800 97318c932b83078e4b485e9b5f3df12b 278 Gene3D G3DSA:1.10.3470.10 56 264 1.5E-7 T 22-04-2016 IPR029022 ABC transporter, BtuC-like TMO_RS13800 97318c932b83078e4b485e9b5f3df12b 278 PANTHER PTHR30477 4 268 5.0E-116 T 22-04-2016 TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 Gene3D G3DSA:3.40.50.300 36 257 3.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 SUPERFAMILY SSF52540 56 247 7.27E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 PANTHER PTHR24220 39 243 9.7E-81 T 22-04-2016 TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 Pfam PF00005 ABC transporter 57 197 6.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 SMART SM00382 66 246 3.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS13755 735c4846c44f400d6961ae1319d64701 283 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 Gene3D G3DSA:3.20.20.70 22 278 3.6E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 PANTHER PTHR21057 8 278 6.9E-157 T 22-04-2016 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 18 280 52.651 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 PANTHER PTHR21057:SF2 8 278 6.9E-157 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 Pfam PF00793 DAHP synthetase I family 18 265 6.7E-64 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 23 278 5.0E-121 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 TMO_RS08780 1b9000c797d80b5fbd6f2a8796743159 284 SUPERFAMILY SSF51569 10 279 4.85E-103 T 22-04-2016 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 Gene3D G3DSA:3.40.50.720 158 275 6.1E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 Gene3D G3DSA:3.90.180.10 11 157 1.0E-51 T 22-04-2016 IPR011032 GroES-like TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 99 8.3E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 SUPERFAMILY SSF50129 13 152 1.07E-41 T 22-04-2016 IPR011032 GroES-like TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 PANTHER PTHR11695:SF610 27 340 2.0E-138 T 22-04-2016 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 Pfam PF00107 Zinc-binding dehydrogenase 163 284 1.3E-32 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 PANTHER PTHR11695 27 340 2.0E-138 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 SUPERFAMILY SSF51735 123 300 2.3E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 SMART SM00829 22 336 4.1E-51 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 TMO_RS04305 f56e402d80269f68889c80c031c3c9b0 341 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 13 338 3.5E-148 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- TMO_RS17280 9a4f48ddc61bca79b6405dd7f30bf7c0 170 PANTHER PTHR38589:SF1 15 166 1.8E-31 T 22-04-2016 TMO_RS17280 9a4f48ddc61bca79b6405dd7f30bf7c0 170 Pfam PF03734 L,D-transpeptidase catalytic domain 18 163 8.3E-10 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 TMO_RS17280 9a4f48ddc61bca79b6405dd7f30bf7c0 170 PANTHER PTHR38589 15 166 1.8E-31 T 22-04-2016 TMO_RS17280 9a4f48ddc61bca79b6405dd7f30bf7c0 170 SUPERFAMILY SSF141523 125 166 6.41E-5 T 22-04-2016 TMO_RS17280 9a4f48ddc61bca79b6405dd7f30bf7c0 170 SUPERFAMILY SSF141523 20 55 6.41E-5 T 22-04-2016 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Gene3D G3DSA:3.40.710.10 46 294 8.7E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SUPERFAMILY SSF56601 31 294 5.05E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PANTHER PTHR21581 52 410 4.3E-102 T 22-04-2016 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Gene3D G3DSA:2.60.410.10 295 384 4.0E-22 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PANTHER PTHR21581:SF3 52 410 4.3E-102 T 22-04-2016 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SMART SM00936 294 384 7.3E-31 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 SUPERFAMILY SSF69189 294 386 8.24E-23 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 134 151 2.7E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 81 92 2.7E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 161 174 2.7E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 383 1.5E-19 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 TMO_RS08430 2a620bfdded36ff8fa5a9f5c0f00ee94 412 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 46 270 4.3E-71 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Pfam PF02779 Transketolase, pyrimidine binding domain 342 513 4.1E-49 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Gene3D G3DSA:3.40.50.970 316 517 4.5E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 SUPERFAMILY SSF52518 1 308 8.62E-114 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 SMART SM00861 343 514 5.7E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 1 322 7.5E-139 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 SUPERFAMILY SSF52518 336 515 2.95E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Gene3D G3DSA:3.40.50.970 1 308 1.1E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Pfam PF02780 Transketolase, C-terminal domain 538 643 1.8E-12 T 22-04-2016 IPR033248 Transketolase, C-terminal domain TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 PANTHER PTHR11624 325 649 0.0 T 22-04-2016 IPR033247 Transketolase family TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 PANTHER PTHR11624 1 301 0.0 T 22-04-2016 IPR033247 Transketolase family TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 SUPERFAMILY SSF52922 524 650 4.45E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 PANTHER PTHR11624:SF1 325 649 0.0 T 22-04-2016 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 PANTHER PTHR11624:SF1 1 301 0.0 T 22-04-2016 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 TIGRFAM TIGR00232 tktlase_bact: transketolase 1 647 2.9E-260 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 ProSitePatterns PS00801 Transketolase signature 1. 6 26 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 TMO_RS04470 883af9356b36711a1c985dc35d79679c 651 Gene3D G3DSA:3.40.50.920 527 649 4.3E-45 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 TMO_RS04820 06d6f294ac6af93ed8a32ffab4e3e4e9 455 Pfam PF02308 MgtC family 15 139 1.1E-14 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 TMO_RS04820 06d6f294ac6af93ed8a32ffab4e3e4e9 455 Pfam PF13194 Domain of unknown function (DUF4010) 187 428 7.7E-45 T 22-04-2016 IPR025105 Domain of unknown function DUF4010 TMO_RS04820 06d6f294ac6af93ed8a32ffab4e3e4e9 455 PANTHER PTHR39084 324 455 2.9E-41 T 22-04-2016 TMO_RS04820 06d6f294ac6af93ed8a32ffab4e3e4e9 455 PANTHER PTHR39084 6 297 2.9E-41 T 22-04-2016 TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 Gene3D G3DSA:3.40.50.450 2 186 6.2E-73 T 22-04-2016 TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 PANTHER PTHR31223 1 191 7.7E-90 T 22-04-2016 TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 SUPERFAMILY SSF102405 2 178 1.05E-61 T 22-04-2016 TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 PANTHER PTHR31223:SF0 1 191 7.7E-90 T 22-04-2016 TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 179 2.9E-63 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG TMO_RS01240 3feccab9dd240e921f25493d9ae5ef8b 193 Pfam PF03641 Possible lysine decarboxylase 46 174 2.5E-41 T 22-04-2016 IPR031100 LOG family TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 PANTHER PTHR10108:SF831 18 214 9.4E-61 T 22-04-2016 TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 Pfam PF07021 Methionine biosynthesis protein MetW 16 210 2.3E-80 T 22-04-2016 IPR010743 Methionine biosynthesis MetW TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 Gene3D G3DSA:3.40.50.150 24 178 9.4E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 PANTHER PTHR10108 18 214 9.4E-61 T 22-04-2016 TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 SUPERFAMILY SSF53335 13 179 1.92E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00745 590c8ca7ca323ef4cf06d6517fbc66d6 215 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 16 210 7.2E-76 T 22-04-2016 IPR010743 Methionine biosynthesis MetW TMO_RS03675 08932480a102b57131eb89e5f0860c71 194 SUPERFAMILY SSF46689 8 52 8.72E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS03675 08932480a102b57131eb89e5f0860c71 194 SUPERFAMILY SSF48498 81 186 9.69E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS03675 08932480a102b57131eb89e5f0860c71 194 Pfam PF13977 Bacterial transcriptional repressor 99 186 7.7E-11 T 22-04-2016 TMO_RS03675 08932480a102b57131eb89e5f0860c71 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 52 5.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS03675 08932480a102b57131eb89e5f0860c71 194 Gene3D G3DSA:1.10.357.10 9 188 4.3E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Pfam PF13307 Helicase C-terminal domain 767 904 7.9E-14 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SMART SM00491 785 908 1.9E-6 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 PANTHER PTHR11472:SF37 216 691 7.6E-59 T 22-04-2016 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 PANTHER PTHR11472:SF37 721 903 7.6E-59 T 22-04-2016 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Gene3D G3DSA:3.40.50.300 394 439 2.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Gene3D G3DSA:3.40.50.300 240 316 2.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 Gene3D G3DSA:3.40.50.300 786 863 0.001 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SUPERFAMILY SSF52540 867 903 2.87E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SUPERFAMILY SSF52540 186 315 2.87E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 SUPERFAMILY SSF52540 395 451 2.87E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 PANTHER PTHR11472 216 691 7.6E-59 T 22-04-2016 TMO_RS13835 a14fa6176e8e9ba3b96f0cbd32c4a85d 987 PANTHER PTHR11472 721 903 7.6E-59 T 22-04-2016 TMO_RS12085 fa04704005eb6b87fd6f840fc9e214d9 213 Gene3D G3DSA:1.10.10.10 33 89 1.2E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12085 fa04704005eb6b87fd6f840fc9e214d9 213 SUPERFAMILY SSF46785 33 88 1.05E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01625 4308a998cc7edb4bbe91419943af1905 308 SUPERFAMILY SSF103481 49 151 1.7E-12 T 22-04-2016 TMO_RS01625 4308a998cc7edb4bbe91419943af1905 308 PANTHER PTHR22911 16 305 2.2E-43 T 22-04-2016 TMO_RS01625 4308a998cc7edb4bbe91419943af1905 308 SUPERFAMILY SSF103481 197 294 6.8E-11 T 22-04-2016 TMO_RS01625 4308a998cc7edb4bbe91419943af1905 308 Pfam PF00892 EamA-like transporter family 23 148 1.5E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS01625 4308a998cc7edb4bbe91419943af1905 308 Pfam PF00892 EamA-like transporter family 160 293 5.9E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07165 8cde52605750206196659f4df52dbaec 657 PANTHER PTHR33362 46 646 2.5E-173 T 22-04-2016 TMO_RS07165 8cde52605750206196659f4df52dbaec 657 PANTHER PTHR33362:SF1 46 646 2.5E-173 T 22-04-2016 TMO_RS07165 8cde52605750206196659f4df52dbaec 657 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 554 2.6E-92 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS07165 8cde52605750206196659f4df52dbaec 657 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 21 625 3.6E-185 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein TMO_RS17750 8410d007776af110546c72da4a057ada 243 Gene3D G3DSA:3.30.420.40 9 143 3.5E-33 T 22-04-2016 TMO_RS17750 8410d007776af110546c72da4a057ada 243 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 9 228 8.5E-48 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 TMO_RS17750 8410d007776af110546c72da4a057ada 243 PANTHER PTHR11735 9 135 9.3E-29 T 22-04-2016 TMO_RS17750 8410d007776af110546c72da4a057ada 243 Pfam PF00814 Glycoprotease family 38 138 1.2E-21 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 TMO_RS17750 8410d007776af110546c72da4a057ada 243 PANTHER PTHR11735:SF11 9 135 9.3E-29 T 22-04-2016 TMO_RS17750 8410d007776af110546c72da4a057ada 243 SUPERFAMILY SSF53067 9 107 3.56E-24 T 22-04-2016 TMO_RS17750 8410d007776af110546c72da4a057ada 243 SUPERFAMILY SSF53067 123 224 5.44E-8 T 22-04-2016 TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 SUPERFAMILY SSF102114 6 388 7.32E-106 T 22-04-2016 TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 Pfam PF04055 Radical SAM superfamily 13 180 6.3E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 Pfam PF06969 HemN C-terminal domain 317 378 7.6E-13 T 22-04-2016 IPR010723 HemN, C-terminal TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 SMART SM00729 8 227 2.4E-50 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 10 347 1.3E-83 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 PANTHER PTHR13932 8 398 6.4E-137 T 22-04-2016 TMO_RS17470 fb19bc5a999bcd1d1c60b7a29d10125a 399 Gene3D G3DSA:3.80.30.20 9 212 6.8E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe TMO_RS05470 2a71d0e44580470a1646cecf249bf6a5 172 Gene3D G3DSA:2.30.290.10 31 170 1.7E-23 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain TMO_RS05470 2a71d0e44580470a1646cecf249bf6a5 172 SUPERFAMILY SSF141457 31 170 9.94E-20 T 22-04-2016 IPR024046 Flagellar assembly factor FliW domain TMO_RS05470 2a71d0e44580470a1646cecf249bf6a5 172 PANTHER PTHR39190 30 170 9.9E-17 T 22-04-2016 TMO_RS05470 2a71d0e44580470a1646cecf249bf6a5 172 Pfam PF02623 FliW protein 47 169 7.7E-17 T 22-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 TMO_RS29580 293c6e9a30efd611e83025694de4d8bc 440 SUPERFAMILY SSF53623 44 222 1.26E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS29580 293c6e9a30efd611e83025694de4d8bc 440 PANTHER PTHR11136:SF0 36 206 7.6E-15 T 22-04-2016 TMO_RS29580 293c6e9a30efd611e83025694de4d8bc 440 Pfam PF08245 Mur ligase middle domain 64 214 3.8E-7 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS29580 293c6e9a30efd611e83025694de4d8bc 440 PANTHER PTHR11136 36 206 7.6E-15 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 TMO_RS29580 293c6e9a30efd611e83025694de4d8bc 440 Gene3D G3DSA:3.40.1190.10 43 220 1.3E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 TMO_RS09715 b9e97e6b67b6e199704462a82ea9e310 427 Pfam PF04285 Protein of unknown function (DUF444) 7 413 4.0E-130 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 TMO_RS09715 b9e97e6b67b6e199704462a82ea9e310 427 SUPERFAMILY SSF53300 242 366 1.92E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A TMO_RS09715 b9e97e6b67b6e199704462a82ea9e310 427 PANTHER PTHR30510 3 419 6.8E-105 T 22-04-2016 TMO_RS09715 b9e97e6b67b6e199704462a82ea9e310 427 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 15 410 1.7E-141 T 22-04-2016 IPR014230 Sporulation protein YhbH TMO_RS09715 b9e97e6b67b6e199704462a82ea9e310 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 3 415 31.988 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:3.40.190.10 173 253 2.2E-15 T 22-04-2016 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:3.40.190.10 91 172 3.4E-14 T 22-04-2016 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 SUPERFAMILY SSF46785 2 84 1.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 PANTHER PTHR30346 1 299 5.7E-71 T 22-04-2016 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 Pfam PF03466 LysR substrate binding domain 86 279 1.4E-27 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 Gene3D G3DSA:1.10.10.10 2 85 3.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 SUPERFAMILY SSF53850 91 282 5.98E-27 T 22-04-2016 TMO_RS13000 d7f24ab9205fd718e4d55ce281bcc980 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS29655 9a0dc13a325b8defa8f1dced37fe5737 359 SUPERFAMILY SSF56935 30 359 4.89E-31 T 22-04-2016 TMO_RS29655 9a0dc13a325b8defa8f1dced37fe5737 359 Pfam PF13609 Gram-negative porin 12 339 2.7E-48 T 22-04-2016 TMO_RS29655 9a0dc13a325b8defa8f1dced37fe5737 359 Gene3D G3DSA:2.40.160.10 34 359 6.4E-42 T 22-04-2016 IPR023614 Porin domain TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 SUPERFAMILY SSF56801 7 513 2.62E-152 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 PANTHER PTHR24096 3 508 1.6E-166 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.40.50.980 148 172 1.4E-28 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.40.50.980 8 114 1.4E-28 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.30.300.30 410 511 2.4E-32 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 500 4.0E-22 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:2.30.38.10 334 408 5.2E-29 T 22-04-2016 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Pfam PF00501 AMP-binding enzyme 14 415 4.2E-100 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS04890 b8281a7a7db6cb5a1e137f16f93e17da 519 Gene3D G3DSA:3.40.50.980 173 322 5.7E-45 T 22-04-2016 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 Pfam PF08241 Methyltransferase domain 153 249 5.9E-23 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 SMART SM00418 6 85 6.3E-21 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 Gene3D G3DSA:3.40.50.150 107 288 2.4E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 PANTHER PTHR10108 113 298 1.3E-28 T 22-04-2016 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 Pfam PF01022 Bacterial regulatory protein, arsR family 14 58 9.6E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 SUPERFAMILY SSF53335 107 300 7.32E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 SUPERFAMILY SSF46785 1 101 4.07E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 7.1E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 7.1E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 7.1E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 7.1E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 TMO_RS04165 47e861ae2d96d7c920bf5493b70c7dd0 306 Gene3D G3DSA:1.10.10.10 3 76 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS03000 540f852eec062badf846335af246473a 222 Gene3D G3DSA:2.60.120.620 87 183 1.4E-4 T 22-04-2016 TMO_RS13560 54422377e8026d9728eb5b552646099a 379 SUPERFAMILY SSF109604 44 176 9.42E-18 T 22-04-2016 TMO_RS13560 54422377e8026d9728eb5b552646099a 379 Gene3D G3DSA:1.10.3210.10 44 151 4.9E-12 T 22-04-2016 IPR006674 HD domain TMO_RS13560 54422377e8026d9728eb5b552646099a 379 TIGRFAM TIGR00277 HDIG: HDIG domain 49 117 2.1E-8 T 22-04-2016 IPR006675 HDIG domain TMO_RS13560 54422377e8026d9728eb5b552646099a 379 Gene3D G3DSA:3.40.50.300 239 369 2.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13560 54422377e8026d9728eb5b552646099a 379 SUPERFAMILY SSF52540 240 371 8.44E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS13560 54422377e8026d9728eb5b552646099a 379 Pfam PF13671 AAA domain 239 366 1.5E-16 T 22-04-2016 TMO_RS13560 54422377e8026d9728eb5b552646099a 379 Pfam PF01966 HD domain 56 147 1.1E-10 T 22-04-2016 IPR006674 HD domain TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 PANTHER PTHR30024 189 449 5.7E-130 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 PANTHER PTHR30024 20 165 5.7E-130 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 PANTHER PTHR30024:SF7 189 449 5.7E-130 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 PANTHER PTHR30024:SF7 20 165 5.7E-130 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 SUPERFAMILY SSF53850 58 306 1.75E-27 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 Gene3D G3DSA:3.40.190.10 196 296 3.7E-9 T 22-04-2016 TMO_RS10795 3ef3458a4c6377b541117ec0fc826ccb 484 Pfam PF13379 NMT1-like family 55 318 1.0E-95 T 22-04-2016 TMO_RS12025 a71f111bef856be05655f9f44fb96d1d 200 SUPERFAMILY SSF53955 19 197 1.01E-31 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS12025 a71f111bef856be05655f9f44fb96d1d 200 Pfam PF05838 Glycosyl hydrolase 108 28 122 3.3E-19 T 22-04-2016 IPR008565 Protein of unknown function DUF847 TMO_RS12025 a71f111bef856be05655f9f44fb96d1d 200 Pfam PF09374 Predicted Peptidoglycan domain 127 195 7.9E-6 T 22-04-2016 IPR018537 Peptidoglycan binding domain TMO_RS12025 a71f111bef856be05655f9f44fb96d1d 200 Gene3D G3DSA:1.20.141.10 18 196 1.4E-35 T 22-04-2016 TMO_RS16000 a1ef63928e912bb4930ec0668e256e81 185 Pfam PF14279 HNH endonuclease 92 141 6.5E-19 T 22-04-2016 IPR029471 HNH endonuclease 5 TMO_RS16000 a1ef63928e912bb4930ec0668e256e81 185 PANTHER PTHR33877 11 178 1.2E-66 T 22-04-2016 TMO_RS16000 a1ef63928e912bb4930ec0668e256e81 185 SMART SM00507 79 132 1.3E-11 T 22-04-2016 IPR003615 HNH nuclease TMO_RS16000 a1ef63928e912bb4930ec0668e256e81 185 PANTHER PTHR33877:SF2 11 178 1.2E-66 T 22-04-2016 TMO_RS11015 7bd3ca933582942cc70aaed8ec618e18 396 Pfam PF03743 Bacterial conjugation TrbI-like protein 214 391 1.2E-58 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI TMO_RS02240 c5293b65ce2d3ae7db1be812bec262ad 270 SUPERFAMILY SSF161098 9 259 4.71E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02240 c5293b65ce2d3ae7db1be812bec262ad 270 PANTHER PTHR30193 9 262 2.4E-48 T 22-04-2016 TMO_RS02240 c5293b65ce2d3ae7db1be812bec262ad 270 PANTHER PTHR30193:SF20 9 262 2.4E-48 T 22-04-2016 TMO_RS02240 c5293b65ce2d3ae7db1be812bec262ad 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 259 1.6E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS02240 c5293b65ce2d3ae7db1be812bec262ad 270 Gene3D G3DSA:1.10.3720.10 11 260 7.6E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17590 dbc23be763588ef5fd21ba77b08781a8 281 PANTHER PTHR30429 7 281 7.6E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17590 dbc23be763588ef5fd21ba77b08781a8 281 SUPERFAMILY SSF53850 45 281 7.1E-67 T 22-04-2016 TMO_RS17590 dbc23be763588ef5fd21ba77b08781a8 281 PIRSF PIRSF002854 6 281 1.1E-85 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS17590 dbc23be763588ef5fd21ba77b08781a8 281 Gene3D G3DSA:3.40.190.10 44 172 7.2E-46 T 22-04-2016 TMO_RS17590 dbc23be763588ef5fd21ba77b08781a8 281 Pfam PF03180 NLPA lipoprotein 45 281 9.8E-79 T 22-04-2016 IPR004872 Lipoprotein NlpA family TMO_RS16155 ebed725f2ba0b8c689dfd98cabb25c69 252 Pfam PF13787 Protein of unknown function with HXXEE motif 54 169 9.9E-21 T 22-04-2016 IPR025671 Protein of unknown function with HXXEE motif TMO_RS17175 01dbfb3df6e3f33f03cad04927d01f38 228 SUPERFAMILY SSF53474 2 225 6.91E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS17175 01dbfb3df6e3f33f03cad04927d01f38 228 PANTHER PTHR17630 12 224 4.7E-41 T 22-04-2016 TMO_RS17175 01dbfb3df6e3f33f03cad04927d01f38 228 Pfam PF01738 Dienelactone hydrolase family 12 225 1.6E-48 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 TMO_RS17175 01dbfb3df6e3f33f03cad04927d01f38 228 Gene3D G3DSA:3.40.50.1820 2 226 4.1E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS02015 ced3945e5c3d7854e12ab718407ee898 364 PANTHER PTHR34219 4 364 1.6E-24 T 22-04-2016 TMO_RS02015 ced3945e5c3d7854e12ab718407ee898 364 Pfam PF03929 PepSY-associated TM region 15 362 6.9E-46 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS02295 ab091d9ab015d809df23093a1b1d1745 566 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 560 33.183 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_RS02295 ab091d9ab015d809df23093a1b1d1745 566 PIRSF PIRSF001294 1 562 8.2E-220 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_RS02295 ab091d9ab015d809df23093a1b1d1745 566 Pfam PF03814 Potassium-transporting ATPase A subunit 11 558 1.3E-222 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_RS02295 ab091d9ab015d809df23093a1b1d1745 566 PANTHER PTHR30607 2 564 2.5E-272 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_RS02295 ab091d9ab015d809df23093a1b1d1745 566 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 560 3.4E-210 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 SUPERFAMILY SSF52540 357 400 2.72E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 SMART SM00382 35 225 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 SUPERFAMILY SSF52540 22 222 1.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 Gene3D G3DSA:3.40.50.300 360 403 2.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 Gene3D G3DSA:3.40.50.300 24 259 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 PANTHER PTHR19211 1 300 7.0E-72 T 22-04-2016 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 Pfam PF00005 ABC transporter 360 397 2.7E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 Pfam PF00005 ABC transporter 37 174 3.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 PANTHER PTHR19211 324 398 7.0E-72 T 22-04-2016 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 PANTHER PTHR19211:SF6 324 398 7.0E-72 T 22-04-2016 TMO_RS21715 c9d59beadbb86c0d1f0e391c9badec4f 404 PANTHER PTHR19211:SF6 1 300 7.0E-72 T 22-04-2016 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 SUPERFAMILY SSF46785 1 83 4.77E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 PANTHER PTHR30346 1 298 4.4E-76 T 22-04-2016 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 PANTHER PTHR30346:SF0 1 298 4.4E-76 T 22-04-2016 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 Pfam PF03466 LysR substrate binding domain 88 288 5.5E-33 T 22-04-2016 IPR005119 LysR, substrate-binding TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:1.10.10.10 1 85 8.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:3.40.190.10 89 176 3.1E-24 T 22-04-2016 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 SUPERFAMILY SSF53850 90 293 2.09E-32 T 22-04-2016 TMO_RS11330 2eee7dd22d07714ef8ca323fab8a8ec2 301 Gene3D G3DSA:3.40.190.10 177 263 9.2E-15 T 22-04-2016 TMO_RS29385 126c76594fb824a98f116c2682de10e5 212 Gene3D G3DSA:1.20.1250.20 2 177 9.7E-22 T 22-04-2016 TMO_RS29385 126c76594fb824a98f116c2682de10e5 212 PANTHER PTHR11360:SF115 1 169 3.1E-42 T 22-04-2016 TMO_RS29385 126c76594fb824a98f116c2682de10e5 212 Pfam PF07690 Major Facilitator Superfamily 7 197 3.5E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS29385 126c76594fb824a98f116c2682de10e5 212 SUPERFAMILY SSF103473 1 178 7.85E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS29385 126c76594fb824a98f116c2682de10e5 212 PANTHER PTHR11360 1 169 3.1E-42 T 22-04-2016 TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 SUPERFAMILY SSF52540 1 192 3.55E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 PANTHER PTHR10695 1 175 1.8E-50 T 22-04-2016 TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Pfam PF01121 Dephospho-CoA kinase 2 174 1.4E-43 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 174 1.6E-37 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Gene3D G3DSA:3.40.50.300 1 176 5.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17130 0dc11e0c817e8c6ca80ba645a4aac8d8 222 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 24.594 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 TMO_RS05315 8756d215fd7ff2ecd11896709f80b21f 808 Pfam PF04738 Lantibiotic dehydratase, C terminus 102 418 2.9E-17 T 22-04-2016 IPR006827 Lantibiotic dehydratase, C-terminal TMO_RS11885 3f27e7ab6ad8f056b224b8d48cc329f3 138 SUPERFAMILY SSF54593 6 122 7.7E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS11885 3f27e7ab6ad8f056b224b8d48cc329f3 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 120 2.1E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain TMO_RS11885 3f27e7ab6ad8f056b224b8d48cc329f3 138 Gene3D G3DSA:3.10.180.10 1 123 3.2E-32 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase TMO_RS11360 92d1655bfe2ef00ca443a1e8df4db00b 105 PIRSF PIRSF031780 1 104 3.9E-24 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 TMO_RS11360 92d1655bfe2ef00ca443a1e8df4db00b 105 Pfam PF07345 Domain of unknown function (DUF1476) 1 99 1.1E-31 T 22-04-2016 IPR009945 Protein of unknown function DUF1476 TMO_RS06890 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 PANTHER PTHR33336 1 84 4.7E-22 T 22-04-2016 TMO_RS06890 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 SUPERFAMILY SSF54909 1 92 8.26E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS06890 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 77 2.0E-20 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_RS06890 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 PANTHER PTHR33336:SF5 1 84 4.7E-22 T 22-04-2016 TMO_RS06890 0066bc77f63a6c4d30a9d5dd6ebb8bbe 96 Gene3D G3DSA:3.30.70.900 5 95 3.3E-28 T 22-04-2016 TMO_RS14550 0b446b7355347df2667226993498904d 485 PANTHER PTHR11851 42 455 1.2E-53 T 22-04-2016 TMO_RS14550 0b446b7355347df2667226993498904d 485 SUPERFAMILY SSF63411 276 459 3.17E-49 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS14550 0b446b7355347df2667226993498904d 485 SUPERFAMILY SSF63411 42 270 4.37E-40 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 TMO_RS14550 0b446b7355347df2667226993498904d 485 Pfam PF05193 Peptidase M16 inactive domain 215 389 5.7E-28 T 22-04-2016 IPR007863 Peptidase M16, C-terminal TMO_RS14550 0b446b7355347df2667226993498904d 485 PANTHER PTHR11851:SF140 42 455 1.2E-53 T 22-04-2016 TMO_RS14550 0b446b7355347df2667226993498904d 485 Gene3D G3DSA:3.30.830.10 279 456 1.5E-37 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS14550 0b446b7355347df2667226993498904d 485 Gene3D G3DSA:3.30.830.10 51 262 2.3E-36 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 128 6.1E-29 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 SUPERFAMILY SSF52540 23 115 1.12E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 PANTHER PTHR33540 2 139 9.2E-35 T 22-04-2016 TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 PANTHER PTHR33540:SF2 2 139 9.2E-35 T 22-04-2016 TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 Gene3D G3DSA:3.40.50.300 2 143 6.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16370 18f91885161b1ed23a4bc39795121c54 163 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 122 1.1E-32 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 TMO_RS11505 192a5c94ca72266b2757ff81701bce8b 238 PANTHER PTHR42208 1 228 2.6E-22 T 22-04-2016 TMO_RS11505 192a5c94ca72266b2757ff81701bce8b 238 PANTHER PTHR42208:SF1 1 228 2.6E-22 T 22-04-2016 TMO_RS11505 192a5c94ca72266b2757ff81701bce8b 238 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 13 222 4.6E-34 T 22-04-2016 TMO_RS06590 97070f729caccba378047afc65997b12 71 Pfam PF08898 Domain of unknown function (DUF1843) 20 71 3.8E-22 T 22-04-2016 IPR014994 Domain of unknown function DUF1843 TMO_RS11660 050b4377b0ff184e23615978fe155be4 211 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 5 210 4.8E-76 T 22-04-2016 IPR011740 Protein of unknown function DUF2460 TMO_RS11660 050b4377b0ff184e23615978fe155be4 211 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 7 210 7.3E-76 T 22-04-2016 IPR011740 Protein of unknown function DUF2460 TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 PRINTS PR01159 DNA gyrase subunit B signature 46 59 1.2E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 PRINTS PR01159 DNA gyrase subunit B signature 72 81 1.2E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 PRINTS PR01159 DNA gyrase subunit B signature 31 46 1.2E-14 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 Gene3D G3DSA:3.30.565.10 3 81 8.4E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 SUPERFAMILY SSF55874 3 62 1.09E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS17975 cc35f45f8002c26037c63bd81a2b4862 81 PANTHER PTHR10169 1 81 1.2E-14 T 22-04-2016 TMO_RS29515 d082c43d13e1ff02253ea09b8913f51e 200 SUPERFAMILY SSF46689 5 71 3.79E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29515 d082c43d13e1ff02253ea09b8913f51e 200 Gene3D G3DSA:1.10.357.10 13 188 3.4E-15 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS29515 d082c43d13e1ff02253ea09b8913f51e 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 8.7E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 SUPERFAMILY SSF53681 126 217 7.33E-7 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 205 215 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 SUPERFAMILY SSF53681 12 107 7.72E-6 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 Pfam PF01177 Asp/Glu/Hydantoin racemase 17 234 1.3E-14 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 Gene3D G3DSA:3.40.50.1860 127 219 4.5E-7 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS04490 b6856ff526086cffca7baf9da2b3cc56 248 Gene3D G3DSA:3.40.50.1860 12 109 4.5E-10 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS29015 fc84f46e09af7268a91e36f137393057 393 PANTHER PTHR34180 13 392 1.5E-28 T 22-04-2016 TMO_RS29015 fc84f46e09af7268a91e36f137393057 393 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 151 374 6.2E-15 T 22-04-2016 IPR005079 Peptidase C45 TMO_RS16430 403c4643db2044899d5b4491b60e3384 374 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 307 1.6E-23 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS16430 403c4643db2044899d5b4491b60e3384 374 PANTHER PTHR33376 1 341 1.2E-30 T 22-04-2016 TMO_RS17925 6316b193c02f73b800d653798a391667 504 Pfam PF03109 ABC1 family 116 233 1.7E-32 T 22-04-2016 IPR004147 UbiB domain TMO_RS17925 6316b193c02f73b800d653798a391667 504 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 444 1.5E-163 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 TMO_RS17925 6316b193c02f73b800d653798a391667 504 SUPERFAMILY SSF56112 98 161 1.04E-36 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS17925 6316b193c02f73b800d653798a391667 504 SUPERFAMILY SSF56112 196 436 1.04E-36 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS17925 6316b193c02f73b800d653798a391667 504 Gene3D G3DSA:3.90.1200.10 265 318 1.4E-8 T 22-04-2016 TMO_RS17925 6316b193c02f73b800d653798a391667 504 PANTHER PTHR10566:SF79 53 445 3.8E-160 T 22-04-2016 TMO_RS17925 6316b193c02f73b800d653798a391667 504 Gene3D G3DSA:3.90.1200.10 127 188 3.5E-6 T 22-04-2016 TMO_RS17925 6316b193c02f73b800d653798a391667 504 PANTHER PTHR10566 53 445 3.8E-160 T 22-04-2016 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 PANTHER PTHR24220:SF305 17 277 2.0E-108 T 22-04-2016 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 PANTHER PTHR24220:SF305 295 323 2.0E-108 T 22-04-2016 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 Pfam PF00005 ABC transporter 32 174 1.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 SMART SM00382 41 230 5.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 SUPERFAMILY SSF52540 10 237 3.38E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 Gene3D G3DSA:3.40.50.300 10 237 4.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 PANTHER PTHR24220 17 277 2.0E-108 T 22-04-2016 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 PANTHER PTHR24220 295 323 2.0E-108 T 22-04-2016 TMO_RS16175 e6dcd7906dfba3b6b3622ffaba0ebd44 326 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14680 307287f26af2d74e036d36483fe6def7 154 Pfam PF12098 Protein of unknown function (DUF3574) 46 154 1.5E-32 T 22-04-2016 IPR021957 Protein of unknown function DUF3574 TMO_RS15905 e1e1ea641d3bb8bf2ead04c743d22181 228 Gene3D G3DSA:2.60.120.10 117 215 2.2E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS15905 e1e1ea641d3bb8bf2ead04c743d22181 228 SUPERFAMILY SSF51182 107 221 1.07E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS15905 e1e1ea641d3bb8bf2ead04c743d22181 228 Pfam PF12973 ChrR Cupin-like domain 123 205 4.0E-12 T 22-04-2016 IPR025979 ChrR-like cupin domain TMO_RS15905 e1e1ea641d3bb8bf2ead04c743d22181 228 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 227 6.1E-55 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 373 484 9.1E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 SUPERFAMILY SSF55874 322 484 4.19E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PANTHER PTHR24423 185 485 3.1E-52 T 22-04-2016 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PANTHER PTHR24423 2 7 3.1E-52 T 22-04-2016 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 SMART SM00387 372 485 2.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 Gene3D G3DSA:3.30.565.10 298 484 8.0E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 2.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 444 2.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 430 2.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 2.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PANTHER PTHR24423:SF534 185 485 3.1E-52 T 22-04-2016 TMO_RS13715 8aa0925eb3a6302ad15edca198114abd 485 PANTHER PTHR24423:SF534 2 7 3.1E-52 T 22-04-2016 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 PANTHER PTHR31480:SF5 109 567 6.3E-39 T 22-04-2016 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 461 486 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 Pfam PF00494 Squalene/phytoene synthase 49 294 1.1E-31 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 Pfam PF00494 Squalene/phytoene synthase 319 571 2.4E-45 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 PANTHER PTHR31480 109 567 6.3E-39 T 22-04-2016 TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 Gene3D G3DSA:1.10.600.10 320 569 8.0E-48 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 Gene3D G3DSA:1.10.600.10 49 306 1.7E-35 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 SUPERFAMILY SSF48576 36 309 1.01E-34 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS29235 ebb0b96ed03e4c4a7ab56d317c750796 594 SUPERFAMILY SSF48576 318 578 6.04E-44 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 Gene3D G3DSA:3.40.140.10 109 186 7.2E-27 T 22-04-2016 TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 Pfam PF04002 RadC-like JAB domain 113 186 5.2E-24 T 22-04-2016 IPR025657 RadC-like JAB domain TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 PANTHER PTHR30471 7 186 1.1E-56 T 22-04-2016 TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 TIGRFAM TIGR00608 radc: DNA repair protein RadC 20 186 2.6E-50 T 22-04-2016 IPR001405 RadC protein TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 PANTHER PTHR30471:SF3 7 186 1.1E-56 T 22-04-2016 TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 Gene3D G3DSA:1.10.150.20 56 91 5.1E-6 T 22-04-2016 TMO_RS10920 431f4cd5971b3fc06de50ffc2ac1d9ab 196 SUPERFAMILY SSF47781 25 92 1.41E-8 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 ProSitePatterns PS00194 Thioredoxin family active site. 39 57 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF14559 Tetratricopeptide repeat 143 204 1.8E-11 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:3.40.30.10 15 122 9.9E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PANTHER PTHR10438:SF282 16 124 9.8E-38 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PANTHER PTHR10438:SF282 265 286 9.8E-38 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF00085 Thioredoxin 20 119 1.8E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 SUPERFAMILY SSF52833 16 123 7.96E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Pfam PF14561 Tetratricopeptide repeat 216 304 7.0E-31 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PANTHER PTHR10438 16 124 9.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PANTHER PTHR10438 265 286 9.8E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:1.25.40.10 132 216 2.0E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 SUPERFAMILY SSF48452 137 196 1.21E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 SUPERFAMILY SSF48452 232 266 1.21E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 Gene3D G3DSA:1.25.40.10 219 304 3.5E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 TIGRFAM TIGR01068 thioredoxin: thioredoxin 33 120 6.6E-29 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 46 55 8.3E-5 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 86 97 8.3E-5 T 22-04-2016 TMO_RS15785 30eb7d46c02c1cb0dd426f8113ac5450 305 PRINTS PR00421 Thioredoxin family signature 38 46 8.3E-5 T 22-04-2016 TMO_RS13995 a7b472b436514241f43e17bd576184a7 212 Gene3D G3DSA:3.40.50.10230 4 204 2.2E-70 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 TMO_RS13995 a7b472b436514241f43e17bd576184a7 212 PANTHER PTHR32439 12 211 7.5E-60 T 22-04-2016 TMO_RS13995 a7b472b436514241f43e17bd576184a7 212 SUPERFAMILY SSF63965 4 205 3.4E-64 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 TMO_RS13995 a7b472b436514241f43e17bd576184a7 212 Pfam PF02570 Precorrin-8X methylmutase 11 205 3.4E-65 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 TMO_RS14795 7424e949f4e6ab42120602f324425441 108 Pfam PF02553 Cobalt transport protein component CbiN 4 72 9.1E-31 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 TMO_RS14795 7424e949f4e6ab42120602f324425441 108 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 108 45.179 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 TMO_RS14795 7424e949f4e6ab42120602f324425441 108 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 87 5.7E-36 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 TMO_RS14795 7424e949f4e6ab42120602f324425441 108 PANTHER PTHR38662 1 99 1.4E-39 T 22-04-2016 TMO_RS03135 b19c121b1be936b8951fcc578835aa3d 406 SUPERFAMILY SSF103473 11 394 2.22E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS03135 b19c121b1be936b8951fcc578835aa3d 406 Gene3D G3DSA:1.20.1250.20 216 392 2.1E-11 T 22-04-2016 TMO_RS03135 b19c121b1be936b8951fcc578835aa3d 406 PANTHER PTHR23534 1 405 4.0E-58 T 22-04-2016 TMO_RS03135 b19c121b1be936b8951fcc578835aa3d 406 Pfam PF07690 Major Facilitator Superfamily 29 342 7.4E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS03135 b19c121b1be936b8951fcc578835aa3d 406 Gene3D G3DSA:1.20.1250.20 19 196 1.0E-10 T 22-04-2016 TMO_RS07330 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 Gene3D G3DSA:3.20.20.60 8 231 8.6E-62 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS07330 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 PANTHER PTHR21631 12 269 7.6E-74 T 22-04-2016 TMO_RS07330 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 SUPERFAMILY SSF51621 8 273 4.6E-65 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 TMO_RS07330 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 250 2.0E-69 T 22-04-2016 TMO_RS07330 63a4dcdf6cc1a5ceb4d6e4f6889013f5 283 PANTHER PTHR21631:SF18 12 269 7.6E-74 T 22-04-2016 TMO_RS01370 06d6ca04f76fd38ad8f1478b30927ff2 148 Gene3D G3DSA:1.10.10.10 2 134 3.2E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01370 06d6ca04f76fd38ad8f1478b30927ff2 148 SUPERFAMILY SSF46785 4 135 1.26E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS01370 06d6ca04f76fd38ad8f1478b30927ff2 148 Pfam PF01047 MarR family 31 87 4.5E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS01370 06d6ca04f76fd38ad8f1478b30927ff2 148 PANTHER PTHR33164 5 148 1.2E-21 T 22-04-2016 TMO_RS01370 06d6ca04f76fd38ad8f1478b30927ff2 148 SMART SM00347 24 124 1.9E-21 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS18125 46beaafeeedb6c117372df51cf00c2d1 88 Gene3D G3DSA:2.60.120.10 4 61 6.0E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS18125 46beaafeeedb6c117372df51cf00c2d1 88 SUPERFAMILY SSF51206 4 63 3.67E-11 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like TMO_RS07545 426c3553028781c26dde5c553e8232ea 426 Pfam PF05559 Protein of unknown function (DUF763) 6 339 3.2E-125 T 22-04-2016 IPR008482 Protein of unknown function DUF763 TMO_RS07545 426c3553028781c26dde5c553e8232ea 426 PANTHER PTHR38597 3 390 2.3E-177 T 22-04-2016 TMO_RS12305 5d15cc16716c1e197df6b6e614aa58bd 168 PANTHER PTHR10545 10 167 7.6E-36 T 22-04-2016 TMO_RS12305 5d15cc16716c1e197df6b6e614aa58bd 168 Gene3D G3DSA:3.40.630.30 9 164 3.1E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS12305 5d15cc16716c1e197df6b6e614aa58bd 168 Pfam PF00583 Acetyltransferase (GNAT) family 67 146 7.1E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS12305 5d15cc16716c1e197df6b6e614aa58bd 168 SUPERFAMILY SSF55729 10 150 6.18E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS02580 79284c63916589b6cd91e7c97c105b4d 205 Pfam PF06226 Protein of unknown function (DUF1007) 17 167 2.7E-42 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 SMART SM01323 18 101 5.0E-48 T 22-04-2016 IPR003849 Preprotein translocase YajC TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 Pfam PF02699 Preprotein translocase subunit 21 98 1.5E-31 T 22-04-2016 IPR003849 Preprotein translocase YajC TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 PANTHER PTHR33909 1 126 5.9E-36 T 22-04-2016 TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 2.3E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 PANTHER PTHR33909:SF1 1 126 5.9E-36 T 22-04-2016 TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 1.9E-18 T 22-04-2016 IPR003849 Preprotein translocase YajC TMO_RS07775 b8c5a732fe7bed6213a0a33d3aad0446 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 1.9E-18 T 22-04-2016 IPR003849 Preprotein translocase YajC TMO_RS05050 d6dc0a519341ea4b8eea981fff344f90 173 PIRSF PIRSF032146 13 173 5.2E-67 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 TMO_RS05050 d6dc0a519341ea4b8eea981fff344f90 173 Pfam PF06793 Uncharacterised protein family (UPF0262) 20 172 1.7E-68 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 TMO_RS05050 d6dc0a519341ea4b8eea981fff344f90 173 Hamap MF_00678 UPF0262 protein . 19 172 38.348 T 22-04-2016 IPR008321 Uncharacterised conserved protein UCP032146 TMO_RS09855 96ee21e67dfb36dbf8a05c8ca22625b5 79 Pfam PF07330 Protein of unknown function (DUF1467) 3 74 5.1E-18 T 22-04-2016 IPR009935 Protein of unknown function DUF1467 TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 7.2E-74 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 SUPERFAMILY SSF51735 403 537 2.41E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 PANTHER PTHR16254:SF6 7 561 5.6E-183 T 22-04-2016 TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 Pfam PF00999 Sodium/hydrogen exchanger family 12 374 9.6E-59 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 PANTHER PTHR16254 7 561 5.6E-183 T 22-04-2016 TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 Gene3D G3DSA:3.40.50.720 401 535 2.6E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16630 8c4953cc3a182b61c2e74589f23f9f55 575 Pfam PF02254 TrkA-N domain 407 520 7.6E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 TMO_RS12695 b3aec21ca5f66dab177d8ff14d72507f 379 Pfam PF04932 O-Antigen ligase 156 311 2.4E-14 T 22-04-2016 IPR007016 O-antigen ligase-related TMO_RS00075 4e97c9d9d699f8ea588355ab6b84d5d8 226 SUPERFAMILY SSF48613 3 218 4.45E-34 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS00075 4e97c9d9d699f8ea588355ab6b84d5d8 226 Pfam PF14518 Iron-containing redox enzyme 38 195 4.9E-23 T 22-04-2016 IPR028201 PqqC-like protein TMO_RS00075 4e97c9d9d699f8ea588355ab6b84d5d8 226 Gene3D G3DSA:1.20.910.10 3 201 2.7E-35 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS00075 4e97c9d9d699f8ea588355ab6b84d5d8 226 SMART SM01236 71 175 1.1E-10 T 22-04-2016 TMO_RS00075 4e97c9d9d699f8ea588355ab6b84d5d8 226 PANTHER PTHR40279 3 213 1.6E-14 T 22-04-2016 TMO_RS08750 1b5ff72db7c52ee6d2056298152498ca 339 SUPERFAMILY SSF51445 31 302 7.26E-18 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily TMO_RS08750 1b5ff72db7c52ee6d2056298152498ca 339 Pfam PF00704 Glycosyl hydrolases family 18 34 239 2.4E-7 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 TMO_RS08750 1b5ff72db7c52ee6d2056298152498ca 339 Gene3D G3DSA:3.20.20.80 28 252 4.3E-14 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 TMO_RS02515 97a0a96ded15869a26342a6c300464f2 172 Gene3D G3DSA:3.90.1340.10 1 63 1.5E-27 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS02515 97a0a96ded15869a26342a6c300464f2 172 SUPERFAMILY SSF88874 1 166 5.62E-37 T 22-04-2016 TMO_RS02515 97a0a96ded15869a26342a6c300464f2 172 PANTHER PTHR34720 1 172 4.4E-42 T 22-04-2016 TMO_RS02515 97a0a96ded15869a26342a6c300464f2 172 Pfam PF07484 Phage Tail Collar Domain 6 62 4.6E-25 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS03990 2b9758cfb0c8737ab11a4187baa59cc5 136 Gene3D G3DSA:1.10.260.40 44 118 6.8E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS03990 2b9758cfb0c8737ab11a4187baa59cc5 136 SMART SM00530 62 116 0.0016 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS03990 2b9758cfb0c8737ab11a4187baa59cc5 136 PANTHER PTHR40455:SF1 8 130 1.1E-15 T 22-04-2016 TMO_RS03990 2b9758cfb0c8737ab11a4187baa59cc5 136 PANTHER PTHR40455 8 130 1.1E-15 T 22-04-2016 TMO_RS03990 2b9758cfb0c8737ab11a4187baa59cc5 136 SUPERFAMILY SSF47413 60 118 8.09E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04370 762b993f43703be64cfef7a35051f29b 468 PANTHER PTHR34219 273 466 2.9E-107 T 22-04-2016 TMO_RS04370 762b993f43703be64cfef7a35051f29b 468 PANTHER PTHR34219 15 250 2.9E-107 T 22-04-2016 TMO_RS04370 762b993f43703be64cfef7a35051f29b 468 Pfam PF03929 PepSY-associated TM region 25 412 4.3E-52 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS04370 762b993f43703be64cfef7a35051f29b 468 PANTHER PTHR34219:SF2 273 466 2.9E-107 T 22-04-2016 TMO_RS04370 762b993f43703be64cfef7a35051f29b 468 PANTHER PTHR34219:SF2 15 250 2.9E-107 T 22-04-2016 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 94 109 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PANTHER PTHR30330:SF3 1 444 2.1E-210 T 22-04-2016 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 442 3.4E-156 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PANTHER PTHR30330 1 444 2.1E-210 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 187 205 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 413 433 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 94 116 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 354 376 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 310 328 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 PRINTS PR00175 Sodium/alanine symporter signature 215 234 5.8E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS12800 20e847d92fdde7445560ab11d329447a 449 Pfam PF01235 Sodium:alanine symporter family 61 446 2.7E-147 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 TMO_RS10475 f2a6cd969a0383253caff2a04bfc67cc 397 Pfam PF10129 OpgC protein 8 361 2.0E-96 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC TMO_RS10475 f2a6cd969a0383253caff2a04bfc67cc 397 PANTHER PTHR38592 5 361 4.9E-53 T 22-04-2016 TMO_RS10475 f2a6cd969a0383253caff2a04bfc67cc 397 PIRSF PIRSF028704 2 382 7.0E-95 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 Gene3D G3DSA:1.10.357.10 6 197 5.2E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.7E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 SUPERFAMILY SSF46689 9 91 3.39E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 PANTHER PTHR30328 6 196 3.4E-36 T 22-04-2016 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 PANTHER PTHR30328:SF3 6 196 3.4E-36 T 22-04-2016 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS11890 958a053afabd3714d01440a6e730bc57 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS07385 1482ad066af06c99d535210b3e17d181 434 Pfam PF00999 Sodium/hydrogen exchanger family 11 410 4.4E-54 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 TMO_RS07385 1482ad066af06c99d535210b3e17d181 434 PANTHER PTHR10110 7 411 7.3E-72 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 TMO_RS07385 1482ad066af06c99d535210b3e17d181 434 PANTHER PTHR10110:SF86 7 411 7.3E-72 T 22-04-2016 TMO_RS09245 f022c765baa95b890cba386f1da9eb69 205 PIRSF PIRSF000847 4 196 1.6E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 TMO_RS09245 f022c765baa95b890cba386f1da9eb69 205 PANTHER PTHR14269 8 180 2.9E-30 T 22-04-2016 TMO_RS09245 f022c765baa95b890cba386f1da9eb69 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 71 1.3E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 TMO_RS10285 455a019e4a429a98d963432ad68af26e 407 Pfam PF08874 Domain of unknown function (DUF1835) 76 180 8.4E-5 T 22-04-2016 IPR014973 Protein of unknown function DUF1835 TMO_RS03420 a744012fdd1af3caf387ccfa1b9a6e07 313 PANTHER PTHR32196:SF33 16 311 9.3E-67 T 22-04-2016 TMO_RS03420 a744012fdd1af3caf387ccfa1b9a6e07 313 PANTHER PTHR32196 16 311 9.3E-67 T 22-04-2016 TMO_RS03420 a744012fdd1af3caf387ccfa1b9a6e07 313 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 291 6.7E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 PANTHER PTHR11920:SF257 30 269 2.7E-56 T 22-04-2016 TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 Gene3D G3DSA:3.30.70.1230 64 246 5.6E-43 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 64 241 7.8E-35 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 SMART SM00044 15 227 1.3E-24 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 SUPERFAMILY SSF55073 59 247 1.04E-57 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS24775 36254d6acf183dd1de8127f642c45d2a 273 PANTHER PTHR11920 30 269 2.7E-56 T 22-04-2016 TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 PANTHER PTHR24220:SF73 15 259 9.8E-59 T 22-04-2016 TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 Pfam PF00005 ABC transporter 37 180 6.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 SMART SM00382 39 213 8.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 PANTHER PTHR24220 15 259 9.8E-59 T 22-04-2016 TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 Gene3D G3DSA:3.40.50.300 16 241 4.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS14715 3e4cb41a55f93d55ea009fdc34cc14d7 271 SUPERFAMILY SSF52540 16 244 2.57E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 Pfam PF00005 ABC transporter 25 173 4.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 SUPERFAMILY SSF52540 6 224 2.28E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 PANTHER PTHR24220:SF111 7 227 3.0E-92 T 22-04-2016 TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 SMART SM00382 34 222 4.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 PANTHER PTHR24220 7 227 3.0E-92 T 22-04-2016 TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 Gene3D G3DSA:3.40.50.300 4 223 1.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS09805 1591ac6a732d323436cc01936a684f4e 227 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10770 385a372042ce8cfbe0ecef3b75d9dad6 127 Gene3D G3DSA:1.20.1260.10 15 73 5.4E-12 T 22-04-2016 IPR012347 Ferritin-related TMO_RS10770 385a372042ce8cfbe0ecef3b75d9dad6 127 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 124 6.0E-39 T 22-04-2016 IPR030907 Ferritin-like protein TMO_RS10770 385a372042ce8cfbe0ecef3b75d9dad6 127 SUPERFAMILY SSF47240 7 93 1.48E-19 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS17555 724145070096f61225da1d72c8f498d8 267 SUPERFAMILY SSF161098 11 257 1.87E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17555 724145070096f61225da1d72c8f498d8 267 PANTHER PTHR30193 15 264 4.4E-29 T 22-04-2016 TMO_RS17555 724145070096f61225da1d72c8f498d8 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 260 7.2E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17555 724145070096f61225da1d72c8f498d8 267 Gene3D G3DSA:1.10.3720.10 17 265 5.1E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17555 724145070096f61225da1d72c8f498d8 267 PANTHER PTHR30193:SF20 15 264 4.4E-29 T 22-04-2016 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 Pfam PF02119 Flagellar P-ring protein 44 386 4.2E-144 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PANTHER PTHR30381:SF0 41 387 2.3E-162 T 22-04-2016 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 Hamap MF_00416 Flagellar P-ring protein [flgI]. 24 387 37.37 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PANTHER PTHR30381 41 387 2.3E-162 T 22-04-2016 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 44 59 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 143 161 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 183 201 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 59 74 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 209 227 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 273 285 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 79 94 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 104 123 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS05495 cae079cb8eff93f0053880b5203444bb 387 PRINTS PR01010 Flagellar P-ring protein signature 126 143 5.99E-83 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 PANTHER PTHR30469:SF5 43 366 3.7E-131 T 22-04-2016 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 PANTHER PTHR30469 43 366 3.7E-131 T 22-04-2016 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:2.40.50.100 166 200 6.2E-14 T 22-04-2016 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 Gene3D G3DSA:2.40.50.100 72 105 6.2E-14 T 22-04-2016 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 SUPERFAMILY SSF111369 64 276 1.26E-33 T 22-04-2016 TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 271 2.5E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain TMO_RS17715 4f29264a80c18972c44bc210c6e4e6ff 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 356 7.0E-75 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS07370 1a1aedce466247be0e492f1928f13ea3 410 Gene3D G3DSA:3.40.50.2000 307 337 2.4E-4 T 22-04-2016 TMO_RS07370 1a1aedce466247be0e492f1928f13ea3 410 Gene3D G3DSA:3.40.50.2000 1 264 2.5E-61 T 22-04-2016 TMO_RS07370 1a1aedce466247be0e492f1928f13ea3 410 PANTHER PTHR11926 1 400 6.9E-64 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 TMO_RS07370 1a1aedce466247be0e492f1928f13ea3 410 PANTHER PTHR11926:SF394 1 400 6.9E-64 T 22-04-2016 TMO_RS07370 1a1aedce466247be0e492f1928f13ea3 410 SUPERFAMILY SSF53756 1 407 1.47E-82 T 22-04-2016 TMO_RS06750 4e56aade01fa853a02028f34bf6dd9fd 137 PANTHER PTHR30558 1 132 3.5E-21 T 22-04-2016 TMO_RS06750 4e56aade01fa853a02028f34bf6dd9fd 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 134 3.7E-22 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 SUPERFAMILY SSF117396 5 262 1.57E-69 T 22-04-2016 IPR002763 Protein of unknown function DUF72 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 PANTHER PTHR30348:SF7 5 218 7.3E-104 T 22-04-2016 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 PANTHER PTHR30348:SF7 236 264 7.3E-104 T 22-04-2016 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 PANTHER PTHR30348 5 218 7.3E-104 T 22-04-2016 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 PANTHER PTHR30348 236 264 7.3E-104 T 22-04-2016 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 Gene3D G3DSA:3.20.20.410 2 262 5.0E-73 T 22-04-2016 IPR002763 Protein of unknown function DUF72 TMO_RS14845 c25ecd385daf5308f5fde100bb1ab5a9 264 Pfam PF01904 Protein of unknown function DUF72 22 260 3.8E-54 T 22-04-2016 IPR002763 Protein of unknown function DUF72 TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 14 130 1.1E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 PANTHER PTHR11717 4 168 4.8E-28 T 22-04-2016 TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 SMART SM00226 12 149 1.3E-36 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 SUPERFAMILY SSF52788 12 148 1.31E-41 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 PANTHER PTHR11717:SF18 4 168 4.8E-28 T 22-04-2016 TMO_RS02360 f0320d8a561f25b3ee475794a6c30e9e 172 Gene3D G3DSA:3.40.50.270 11 143 2.3E-41 T 22-04-2016 TMO_RS10565 da1e2da9e9e2d7be21ece2cc9d137abc 381 PIRSF PIRSF007313 1 367 9.4E-160 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 TMO_RS10565 da1e2da9e9e2d7be21ece2cc9d137abc 381 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 356 1.4E-162 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 TMO_RS16120 a6b28c424601ef9f8da909a4f43f7308 142 SUPERFAMILY SSF55961 1 142 2.57E-47 T 22-04-2016 TMO_RS16120 a6b28c424601ef9f8da909a4f43f7308 142 Gene3D G3DSA:3.30.530.20 1 142 5.1E-61 T 22-04-2016 IPR023393 START-like domain TMO_RS16120 a6b28c424601ef9f8da909a4f43f7308 142 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 5 141 6.7E-45 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G TMO_RS16120 a6b28c424601ef9f8da909a4f43f7308 142 PANTHER PTHR38588:SF1 2 142 1.6E-39 T 22-04-2016 TMO_RS16120 a6b28c424601ef9f8da909a4f43f7308 142 PANTHER PTHR38588 2 142 1.6E-39 T 22-04-2016 TMO_RS01870 e595cda27cc04d0f4ec1f2b0190607ac 510 PANTHER PTHR35342 1 504 6.8E-222 T 22-04-2016 TMO_RS01870 e595cda27cc04d0f4ec1f2b0190607ac 510 PANTHER PTHR35342:SF4 1 504 6.8E-222 T 22-04-2016 TMO_RS01870 e595cda27cc04d0f4ec1f2b0190607ac 510 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 19 439 1.1E-140 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 Pfam PF00850 Histone deacetylase domain 28 285 1.2E-46 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 Gene3D G3DSA:3.40.800.20 4 289 1.2E-60 T 22-04-2016 IPR023801 Histone deacetylase domain TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 PANTHER PTHR10625:SF131 11 286 5.1E-107 T 22-04-2016 TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 3.4E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 PRINTS PR01270 Histone deacetylase superfamily signature 225 235 3.4E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 3.4E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 SUPERFAMILY SSF52768 3 291 1.77E-78 T 22-04-2016 TMO_RS02085 29d8aebd7c4f80066848228cfc68f42f 305 PANTHER PTHR10625 11 286 5.1E-107 T 22-04-2016 IPR000286 Histone deacetylase superfamily TMO_RS03545 7906ed64eb065f7f799c966230707aaf 267 Gene3D G3DSA:3.90.226.10 5 264 1.3E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS03545 7906ed64eb065f7f799c966230707aaf 267 SUPERFAMILY SSF52096 2 266 3.98E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS03545 7906ed64eb065f7f799c966230707aaf 267 PANTHER PTHR11941 7 264 3.4E-63 T 22-04-2016 TMO_RS03545 7906ed64eb065f7f799c966230707aaf 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 264 2.8E-55 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS03545 7906ed64eb065f7f799c966230707aaf 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 108 128 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 Pfam PF04333 MlaA lipoprotein 65 257 2.2E-63 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 PANTHER PTHR30035 59 283 4.1E-45 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 134 151 3.1E-23 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 171 188 3.1E-23 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 66 79 3.1E-23 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS04160 d63d7356f35b2e834cff5a77d28893de 283 PRINTS PR01805 VacJ lipoprotein signature 83 99 3.1E-23 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 Pfam PF01645 Conserved region in glutamate synthase 172 488 2.3E-85 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 PIRSF PIRSF006429 21 547 1.7E-153 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 SUPERFAMILY SSF51395 30 515 2.77E-132 T 22-04-2016 TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 PANTHER PTHR11938 174 504 6.8E-80 T 22-04-2016 TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 PIRSF PIRSF500060 25 544 1.2E-216 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 PANTHER PTHR11938:SF50 174 504 6.8E-80 T 22-04-2016 TMO_RS15245 412784fbec26d01b8ce8d61e80eac1df 550 Gene3D G3DSA:3.20.20.70 66 515 1.7E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06145 8c9f2e737daa7a7018903f14d392c388 70 Pfam PF12073 Protein of unknown function (DUF3553) 13 60 1.8E-23 T 22-04-2016 IPR021938 Protein of unknown function DUF3553 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 Pfam PF01037 Lrp/AsnC ligand binding domain 71 137 4.2E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 4.9E-20 T 22-04-2016 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 Gene3D G3DSA:3.30.70.920 56 139 3.8E-27 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 SUPERFAMILY SSF46785 2 62 1.73E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 Gene3D G3DSA:1.10.10.10 4 55 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.5E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.5E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.5E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 SMART SM00344 3 112 2.8E-47 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 PANTHER PTHR30154:SF28 1 152 2.8E-59 T 22-04-2016 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 PANTHER PTHR30154 1 152 2.8E-59 T 22-04-2016 TMO_RS07475 e7086ebe9ad7497031194b7cb3140c55 153 SUPERFAMILY SSF54909 65 152 2.95E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 PANTHER PTHR23029:SF28 2 200 2.2E-40 T 22-04-2016 TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 SUPERFAMILY SSF53254 7 194 6.0E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 PANTHER PTHR23029 2 200 2.2E-40 T 22-04-2016 TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 185 2.0E-37 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 Gene3D G3DSA:3.40.50.1240 5 200 4.5E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily TMO_RS15880 513e3dec9d450d3117242a768c6f6264 210 SMART SM00855 6 156 8.1E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 TMO_RS03510 c1a4f1dc9baa526df5aa7e16464fd460 139 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 19 53 1.8E-16 T 22-04-2016 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal TMO_RS03510 c1a4f1dc9baa526df5aa7e16464fd460 139 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 58 120 1.2E-18 T 22-04-2016 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal TMO_RS03510 c1a4f1dc9baa526df5aa7e16464fd460 139 SUPERFAMILY SSF50249 6 127 1.35E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold TMO_RS03510 c1a4f1dc9baa526df5aa7e16464fd460 139 PANTHER PTHR34075:SF2 1 139 1.3E-41 T 22-04-2016 TMO_RS03510 c1a4f1dc9baa526df5aa7e16464fd460 139 PANTHER PTHR34075 1 139 1.3E-41 T 22-04-2016 TMO_RS13820 c070b01b7dcdb1623ce8315e62d402be 175 PANTHER PTHR36449 7 174 7.6E-32 T 22-04-2016 TMO_RS13820 c070b01b7dcdb1623ce8315e62d402be 175 Gene3D G3DSA:3.40.630.30 27 150 1.3E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS13820 c070b01b7dcdb1623ce8315e62d402be 175 SUPERFAMILY SSF55729 34 150 1.77E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS13820 c070b01b7dcdb1623ce8315e62d402be 175 Pfam PF00583 Acetyltransferase (GNAT) family 60 150 4.0E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 Gene3D G3DSA:1.10.10.10 25 167 5.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 SUPERFAMILY SSF46785 30 169 1.17E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 92 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 128 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 108 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 PRINTS PR00598 Bacterial regulatory protein MarR family signature 142 162 3.1E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 PANTHER PTHR33164 5 176 6.5E-24 T 22-04-2016 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 Pfam PF01047 MarR family 60 116 1.1E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS12945 1b703b6dbefffc2155dffda2bcbd82ac 189 SMART SM00347 52 152 1.7E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 PANTHER PTHR30425 211 449 1.7E-91 T 22-04-2016 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 PANTHER PTHR30425 1 78 1.7E-91 T 22-04-2016 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 Gene3D G3DSA:1.10.3720.10 207 449 8.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 Gene3D G3DSA:1.10.3720.10 58 80 8.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 209 447 5.1E-65 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 Pfam PF11812 Domain of unknown function (DUF3333) 36 183 4.6E-51 T 22-04-2016 IPR024573 Domain of unknown function DUF3333 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 SUPERFAMILY SSF161098 226 443 5.36E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 PANTHER PTHR30425:SF2 211 449 1.7E-91 T 22-04-2016 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 PANTHER PTHR30425:SF2 1 78 1.7E-91 T 22-04-2016 TMO_RS17655 519e0d21ff1c81c764c1e69abafc08ef 450 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 250 447 1.8E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS04015 d58976ac204af0d53771ce67a8b664cf 399 Gene3D G3DSA:3.40.50.2300 152 321 2.5E-35 T 22-04-2016 TMO_RS04015 d58976ac204af0d53771ce67a8b664cf 399 SUPERFAMILY SSF53822 23 394 7.06E-76 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS04015 d58976ac204af0d53771ce67a8b664cf 399 PANTHER PTHR30483:SF17 1 396 8.0E-160 T 22-04-2016 TMO_RS04015 d58976ac204af0d53771ce67a8b664cf 399 PANTHER PTHR30483 1 396 8.0E-160 T 22-04-2016 TMO_RS04015 d58976ac204af0d53771ce67a8b664cf 399 Pfam PF13458 Periplasmic binding protein 23 359 5.0E-72 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS00560 73777d6372c83e2e46f32cbf03919e5f 449 SUPERFAMILY SSF101960 20 434 1.44E-95 T 22-04-2016 TMO_RS00560 73777d6372c83e2e46f32cbf03919e5f 449 PANTHER PTHR30508:SF0 7 445 6.7E-107 T 22-04-2016 TMO_RS00560 73777d6372c83e2e46f32cbf03919e5f 449 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 409 1.9E-63 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 TMO_RS00560 73777d6372c83e2e46f32cbf03919e5f 449 PANTHER PTHR30508 7 445 6.7E-107 T 22-04-2016 TMO_RS00560 73777d6372c83e2e46f32cbf03919e5f 449 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 425 3.1E-78 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 PANTHER PTHR22981 4 297 1.7E-118 T 22-04-2016 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 Gene3D G3DSA:1.10.1040.10 164 297 3.4E-49 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 292 1.7E-41 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 SUPERFAMILY SSF51735 1 162 3.58E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 293 2.0E-132 T 22-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 PIRSF PIRSF000103 1 299 2.1E-82 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 SUPERFAMILY SSF48179 164 294 3.74E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 5.9E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 TMO_RS06900 08dedc7fa4178b7dd664b49e10bae9af 299 Gene3D G3DSA:3.40.50.720 2 163 2.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 Gene3D G3DSA:3.30.1330.60 161 279 3.2E-23 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 SUPERFAMILY SSF103088 171 279 2.09E-23 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 209 224 2.1E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 224 240 2.1E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 PRINTS PR01021 OMPA domain signature 179 201 2.1E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 Pfam PF00691 OmpA family 178 273 3.9E-15 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS02090 5e5fb81b5f573416d2972c40193c0070 281 PANTHER PTHR30128 177 277 6.3E-14 T 22-04-2016 TMO_RS15585 35d6a3eaf9b304b0eac59adcce4ad660 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 305 2.1E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS15585 35d6a3eaf9b304b0eac59adcce4ad660 347 PANTHER PTHR30482 19 346 4.5E-94 T 22-04-2016 TMO_RS15585 35d6a3eaf9b304b0eac59adcce4ad660 347 PANTHER PTHR30482:SF10 19 346 4.5E-94 T 22-04-2016 TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 SMART SM01260 566 903 3.5E-47 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 671 686 4.2E-10 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 728 744 4.2E-10 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 786 806 4.2E-10 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 PRINTS PR01950 LanC-like protein superfamily signature 569 587 4.2E-10 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 Pfam PF05147 Lanthionine synthetase C-like protein 570 853 3.2E-36 T 22-04-2016 IPR007822 Lanthionine synthetase C-like TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 SUPERFAMILY SSF158745 565 888 9.94E-44 T 22-04-2016 TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 Gene3D G3DSA:1.50.10.10 631 822 5.9E-5 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 TMO_RS12205 89685fa89c7c19f47388332af9324cf4 906 Pfam PF13575 Domain of unknown function (DUF4135) 102 474 6.3E-79 T 22-04-2016 IPR025410 Domain of unknown function DUF4135 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 SMART SM00382 387 870 7.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:3.40.50.300 365 476 3.5E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:3.40.50.300 706 883 5.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 PANTHER PTHR24221 767 893 2.8E-61 T 22-04-2016 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 PANTHER PTHR24221:SF161 767 893 2.8E-61 T 22-04-2016 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 PANTHER PTHR24221:SF161 74 470 2.8E-61 T 22-04-2016 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00005 ABC transporter 740 824 3.0E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00005 ABC transporter 378 480 1.4E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Gene3D G3DSA:1.20.1560.10 18 333 9.4E-45 T 22-04-2016 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 PANTHER PTHR24221 74 470 2.8E-61 T 22-04-2016 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 SUPERFAMILY SSF52540 364 490 2.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 SUPERFAMILY SSF52540 777 883 2.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 SUPERFAMILY SSF90123 18 339 1.96E-49 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS10335 7a032477ee2350a9a3f09edf77292609 894 Pfam PF00664 ABC transporter transmembrane region 66 304 2.2E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 TMO_RS12560 f6fd88a77ff640fe0149c54c3fcdf50c 147 PANTHER PTHR11075 1 142 9.8E-27 T 22-04-2016 TMO_RS12560 f6fd88a77ff640fe0149c54c3fcdf50c 147 SUPERFAMILY SSF110916 15 108 3.01E-12 T 22-04-2016 TMO_RS12560 f6fd88a77ff640fe0149c54c3fcdf50c 147 Gene3D G3DSA:3.30.160.200 13 114 1.9E-25 T 22-04-2016 TMO_RS12560 f6fd88a77ff640fe0149c54c3fcdf50c 147 Pfam PF00472 RF-1 domain 13 141 1.9E-21 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 TMO_RS17615 8f5addf40a0945609c3ff1aed3376bcc 406 PANTHER PTHR30483 1 404 3.4E-175 T 22-04-2016 TMO_RS17615 8f5addf40a0945609c3ff1aed3376bcc 406 PANTHER PTHR30483:SF17 1 404 3.4E-175 T 22-04-2016 TMO_RS17615 8f5addf40a0945609c3ff1aed3376bcc 406 Pfam PF13458 Periplasmic binding protein 30 367 7.3E-82 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS17615 8f5addf40a0945609c3ff1aed3376bcc 406 SUPERFAMILY SSF53822 30 402 1.04E-82 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS17615 8f5addf40a0945609c3ff1aed3376bcc 406 Gene3D G3DSA:3.40.50.2300 156 328 8.8E-35 T 22-04-2016 TMO_RS14855 218e560939837fe933375e387040f823 195 Pfam PF05962 HutD 8 171 5.4E-56 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves TMO_RS14855 218e560939837fe933375e387040f823 195 Gene3D G3DSA:2.60.120.10 107 172 1.2E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS14855 218e560939837fe933375e387040f823 195 PANTHER PTHR37943:SF1 1 141 1.6E-44 T 22-04-2016 TMO_RS14855 218e560939837fe933375e387040f823 195 PANTHER PTHR37943 1 141 1.6E-44 T 22-04-2016 TMO_RS14855 218e560939837fe933375e387040f823 195 SUPERFAMILY SSF51182 1 170 5.63E-53 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS14855 218e560939837fe933375e387040f823 195 Gene3D G3DSA:2.60.120.10 9 106 2.3E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 Gene3D G3DSA:3.40.50.980 334 397 3.8E-21 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 Gene3D G3DSA:3.40.50.980 199 291 3.8E-21 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 SUPERFAMILY SSF56801 10 296 1.16E-100 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 SUPERFAMILY SSF56801 337 602 1.16E-100 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 Gene3D G3DSA:2.30.38.10 398 465 6.0E-17 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 PANTHER PTHR24096 12 605 1.6E-299 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 Pfam PF00501 AMP-binding enzyme 19 469 2.2E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 PANTHER PTHR24096:SF151 12 605 1.6E-299 T 22-04-2016 TMO_RS15440 99ea07db1cee2916e861e3c92a1cf8b6 642 Gene3D G3DSA:3.40.50.980 11 198 1.1E-26 T 22-04-2016 TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 103 6.6E-16 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 Gene3D G3DSA:3.30.70.270 1 106 4.0E-23 T 22-04-2016 TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 PANTHER PTHR10799:SF774 1 100 2.0E-15 T 22-04-2016 TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 SMART SM00267 1 104 8.8E-4 T 22-04-2016 IPR000160 GGDEF domain TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 SUPERFAMILY SSF55073 1 105 3.14E-20 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 PANTHER PTHR10799 1 100 2.0E-15 T 22-04-2016 TMO_RS29025 c12ba6662436acffecefd6c039f9493c 116 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 99 1.0E-17 T 22-04-2016 IPR000160 GGDEF domain TMO_RS07690 0e0336507c59aefbc4b8c43f12a49bb9 550 Pfam PF02690 Na+/Pi-cotransporter 14 149 3.9E-22 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 TMO_RS07690 0e0336507c59aefbc4b8c43f12a49bb9 550 Pfam PF02690 Na+/Pi-cotransporter 140 253 3.1E-9 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 TMO_RS16510 78969122d1ff37cb3febdfc6bdf30720 126 Gene3D G3DSA:1.20.1300.10 10 121 3.5E-27 T 22-04-2016 TMO_RS16510 78969122d1ff37cb3febdfc6bdf30720 126 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 7.7E-28 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 TMO_RS16510 78969122d1ff37cb3febdfc6bdf30720 126 SUPERFAMILY SSF81343 11 122 7.85E-29 T 22-04-2016 TMO_RS16510 78969122d1ff37cb3febdfc6bdf30720 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 111 2.7E-18 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 TMO_RS00900 931859ed63db663aeb2aa09dffbd5cf6 153 PANTHER PTHR30305:SF1 7 83 7.5E-12 T 22-04-2016 TMO_RS00900 931859ed63db663aeb2aa09dffbd5cf6 153 Gene3D G3DSA:3.40.50.300 6 143 2.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00900 931859ed63db663aeb2aa09dffbd5cf6 153 SUPERFAMILY SSF53795 6 125 1.22E-17 T 22-04-2016 TMO_RS00900 931859ed63db663aeb2aa09dffbd5cf6 153 Pfam PF07475 HPr Serine kinase C-terminal domain 6 83 3.2E-18 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 TMO_RS00900 931859ed63db663aeb2aa09dffbd5cf6 153 PANTHER PTHR30305 7 83 7.5E-12 T 22-04-2016 TMO_RS12420 3bdb6308e3125614c2c5ffa5e38c8e17 174 PANTHER PTHR39337 16 143 8.7E-23 T 22-04-2016 TMO_RS12420 3bdb6308e3125614c2c5ffa5e38c8e17 174 Pfam PF04343 Protein of unknown function, DUF488 25 129 9.6E-16 T 22-04-2016 IPR007438 Protein of unknown function DUF488 TMO_RS12420 3bdb6308e3125614c2c5ffa5e38c8e17 174 PANTHER PTHR39337:SF1 16 143 8.7E-23 T 22-04-2016 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 SUPERFAMILY SSF48150 12 193 2.01E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 PANTHER PTHR30037 12 195 7.3E-102 T 22-04-2016 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 PANTHER PTHR30037:SF4 12 195 7.3E-102 T 22-04-2016 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 12 188 2.0E-73 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 Pfam PF03352 Methyladenine glycosylase 14 189 9.2E-73 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 TMO_RS04975 87f7d5873580683294c4805cc87983ee 197 Gene3D G3DSA:1.10.340.30 12 190 6.8E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 24 349 2.5E-132 T 22-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 PANTHER PTHR11203:SF35 22 234 1.3E-67 T 22-04-2016 TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 SUPERFAMILY SSF56281 27 332 3.68E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 PANTHER PTHR11203 22 234 1.3E-67 T 22-04-2016 TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 Gene3D G3DSA:3.60.15.10 51 159 2.4E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS10390 89a8da754df3c5f4316c5255cea44405 367 Gene3D G3DSA:3.60.15.10 290 326 2.4E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 SMART SM00388 199 268 4.9E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF55874 257 430 1.83E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:1.10.287.130 190 254 9.6E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 200 267 6.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 429 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 410 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:3.10.580.10 72 182 2.1E-7 T 22-04-2016 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 Gene3D G3DSA:3.30.565.10 255 430 1.8E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 430 2.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF47384 184 267 9.22E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 SMART SM00387 314 432 1.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 SUPERFAMILY SSF54631 72 185 3.54E-8 T 22-04-2016 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 PANTHER PTHR24423 178 442 1.9E-80 T 22-04-2016 TMO_RS29440 dff804e044d26d3193f936aa48f9de21 448 PANTHER PTHR24423 1 22 1.9E-80 T 22-04-2016 TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 315 5.3E-92 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 Gene3D G3DSA:3.40.50.300 47 107 1.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 Gene3D G3DSA:3.40.50.300 153 161 1.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 PANTHER PTHR30160:SF13 4 336 5.4E-70 T 22-04-2016 TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 SUPERFAMILY SSF52540 49 198 1.91E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 20 324 8.4E-64 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 330 35.492 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 TMO_RS14285 640d8b3f7981bff5b60d3fcfac628d37 362 PANTHER PTHR30160 4 336 5.4E-70 T 22-04-2016 TMO_RS05565 c6f1862961e2ea79c3c71f072fece694 220 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 22 56 3.4E-6 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 Pfam PF01411 tRNA synthetases class II (A) 22 66 6.4E-7 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 SUPERFAMILY SSF55186 103 252 6.8E-29 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 199 251 1.6E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 SUPERFAMILY SSF50447 2 66 3.39E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 SMART SM00863 199 251 1.1E-12 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 TMO_RS12615 c9c025660334b568582c1b0c35770eb4 256 PANTHER PTHR11777 11 251 3.1E-52 T 22-04-2016 TMO_RS01705 28940aba9bccd55ac6de5de771de2f12 107 SUPERFAMILY SSF47413 33 93 3.52E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01705 28940aba9bccd55ac6de5de771de2f12 107 Gene3D G3DSA:1.10.260.40 32 91 2.0E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01705 28940aba9bccd55ac6de5de771de2f12 107 Pfam PF13744 Helix-turn-helix domain 12 89 2.6E-11 T 22-04-2016 TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 Gene3D G3DSA:1.10.12.10 208 264 5.2E-11 T 22-04-2016 IPR014748 Crontonase, C-terminal TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 SUPERFAMILY SSF52096 4 264 1.07E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 263 4.1E-51 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 PANTHER PTHR11941:SF54 1 261 1.5E-67 T 22-04-2016 TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 PANTHER PTHR11941 1 261 1.5E-67 T 22-04-2016 TMO_RS07085 f3d8f075377f8d9121ac9b8706937ed5 264 Gene3D G3DSA:3.90.226.10 2 204 4.4E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 Gene3D G3DSA:3.40.640.10 55 248 3.6E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 361 54.405 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 360 4.0E-91 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 PANTHER PTHR11751 4 360 2.8E-66 T 22-04-2016 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 SUPERFAMILY SSF53383 6 361 2.02E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 Pfam PF00155 Aminotransferase class I and II 30 347 4.0E-52 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 PANTHER PTHR11751:SF398 4 360 2.8E-66 T 22-04-2016 TMO_RS00730 181ec6f1dc31c83344115a7fd24c525c 366 Gene3D G3DSA:3.90.1150.10 249 360 5.8E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 13 267 32.135 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 PANTHER PTHR30457 14 251 1.3E-67 T 22-04-2016 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 Gene3D G3DSA:3.40.1210.10 14 250 2.7E-72 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 SUPERFAMILY SSF64167 14 261 4.84E-70 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 Pfam PF01975 Survival protein SurE 15 197 3.1E-50 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS03255 5dabda2515b27904fc0e7db92767ca5a 268 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 14 248 6.2E-54 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS11170 15017e243e01fb2348dcc9de42649343 195 SUPERFAMILY SSF143081 2 194 6.8E-39 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS11170 15017e243e01fb2348dcc9de42649343 195 Pfam PF02586 SOS response associated peptidase (SRAP) 86 194 1.0E-19 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS11170 15017e243e01fb2348dcc9de42649343 195 Gene3D G3DSA:3.90.1680.10 1 194 4.5E-28 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS23270 4fb87e5af8e15f39d49a4beb9041e8fb 263 Gene3D G3DSA:1.20.1250.20 4 157 7.2E-19 T 22-04-2016 TMO_RS23270 4fb87e5af8e15f39d49a4beb9041e8fb 263 SUPERFAMILY SSF103473 3 262 1.7E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS23270 4fb87e5af8e15f39d49a4beb9041e8fb 263 PANTHER PTHR23501 2 260 7.1E-34 T 22-04-2016 TMO_RS23270 4fb87e5af8e15f39d49a4beb9041e8fb 263 PANTHER PTHR23501:SF4 2 260 7.1E-34 T 22-04-2016 TMO_RS23270 4fb87e5af8e15f39d49a4beb9041e8fb 263 Pfam PF07690 Major Facilitator Superfamily 3 262 5.2E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 68 79 1.2E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 111 125 1.2E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 42 50 1.2E-13 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PANTHER PTHR10992:SF860 223 326 9.4E-90 T 22-04-2016 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PANTHER PTHR10992:SF860 7 178 9.4E-90 T 22-04-2016 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 5.5E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 5.5E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 5.5E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 Gene3D G3DSA:3.40.50.1820 13 315 1.9E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 Pfam PF00561 alpha/beta hydrolase fold 41 150 2.6E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PANTHER PTHR10992 223 326 9.4E-90 T 22-04-2016 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PANTHER PTHR10992 7 178 9.4E-90 T 22-04-2016 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 14 325 6.3E-94 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 SUPERFAMILY SSF53474 2 312 7.64E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS15375 ac0ae9da40f0275c5cc5f6eff5aac021 339 PIRSF PIRSF006431 4 330 3.7E-112 T 22-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 TMO_RS10350 3a118d11f114a044f149dc024c9c185a 305 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 246 5.5E-13 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TMO_RS10350 3a118d11f114a044f149dc024c9c185a 305 PANTHER PTHR40572 40 295 1.7E-40 T 22-04-2016 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 25 429 5.1E-123 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 Pfam PF01979 Amidohydrolase family 58 428 2.2E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 PANTHER PTHR11647 9 430 2.4E-165 T 22-04-2016 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 ProSitePatterns PS00482 Dihydroorotase signature 1. 64 72 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 Gene3D G3DSA:2.30.40.10 9 75 7.5E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 SUPERFAMILY SSF51338 8 60 1.11E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 SUPERFAMILY SSF51338 374 430 1.11E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 SUPERFAMILY SSF51556 61 373 2.17E-109 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 Hamap MF_00220_B Dihydroorotase [pyrC]. 4 432 41.553 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 PANTHER PTHR11647:SF70 9 430 2.4E-165 T 22-04-2016 TMO_RS12825 c1626d0ca2c3bae3edba2eee43dca992 432 Gene3D G3DSA:3.20.20.140 76 414 4.3E-111 T 22-04-2016 TMO_RS07220 48939b32cf287492b59d5919429c514d 264 PANTHER PTHR11487 29 249 3.2E-55 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 TMO_RS07220 48939b32cf287492b59d5919429c514d 264 SUPERFAMILY SSF53474 16 258 1.31E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS07220 48939b32cf287492b59d5919429c514d 264 Pfam PF00975 Thioesterase domain 35 258 1.3E-34 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 TMO_RS07220 48939b32cf287492b59d5919429c514d 264 Gene3D G3DSA:3.40.50.1820 23 260 3.6E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PANTHER PTHR34933:SF1 51 264 1.7E-59 T 22-04-2016 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 Hamap MF_00415 Flagellar L-ring protein [flgH]. 16 262 24.733 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 225 239 1.2E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 241 255 1.2E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 204 220 1.2E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 99 111 1.2E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PRINTS PR01008 Flagellar L-ring protein signature 178 193 1.2E-27 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 PANTHER PTHR34933 51 264 1.7E-59 T 22-04-2016 TMO_RS05515 0bfeac7093d39dbb71913f0520a42f0c 264 Pfam PF02107 Flagellar L-ring protein 79 263 5.5E-54 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 PANTHER PTHR11552:SF139 96 236 7.6E-15 T 22-04-2016 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 Pfam PF05199 GMC oxidoreductase 101 225 2.9E-17 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 Gene3D G3DSA:3.50.50.60 153 235 9.3E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 SUPERFAMILY SSF51905 80 86 8.94E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 SUPERFAMILY SSF51905 173 235 8.94E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS00500 308449557b59c7f2698ccab7e834ec1f 238 PANTHER PTHR11552 96 236 7.6E-15 T 22-04-2016 TMO_RS00485 86b96f545cf9bc6a0fd989401c767122 119 PANTHER PTHR40261:SF2 32 113 1.4E-27 T 22-04-2016 TMO_RS00485 86b96f545cf9bc6a0fd989401c767122 119 Gene3D G3DSA:2.102.10.10 9 115 3.5E-20 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS00485 86b96f545cf9bc6a0fd989401c767122 119 SUPERFAMILY SSF50022 9 113 5.37E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS00485 86b96f545cf9bc6a0fd989401c767122 119 Pfam PF00355 Rieske [2Fe-2S] domain 10 96 1.0E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 TMO_RS00485 86b96f545cf9bc6a0fd989401c767122 119 PANTHER PTHR40261 32 113 1.4E-27 T 22-04-2016 TMO_RS17270 7fcd4b27eafd615e13a2539bc631f932 222 Gene3D G3DSA:3.20.20.70 23 204 1.1E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS17270 7fcd4b27eafd615e13a2539bc631f932 222 Pfam PF02581 Thiamine monophosphate synthase/TENI 41 195 2.7E-19 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS17270 7fcd4b27eafd615e13a2539bc631f932 222 SUPERFAMILY SSF51391 45 203 5.36E-27 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 4.1E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 PANTHER PTHR30055 1 170 1.4E-23 T 22-04-2016 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.0E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.0E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 SUPERFAMILY SSF46689 5 86 2.87E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS00175 97fead11548f7cc18742622f3fdb431e 202 Gene3D G3DSA:1.10.357.10 4 198 1.8E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS15330 bd85ac780cf14a50beb8f4dbc34bb209 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 231 1.9E-12 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS15330 bd85ac780cf14a50beb8f4dbc34bb209 314 SUPERFAMILY SSF51735 1 292 3.5E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15330 bd85ac780cf14a50beb8f4dbc34bb209 314 Gene3D G3DSA:3.40.50.720 1 216 1.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS14400 17b936c7c8f70e406e02749a45697ba2 143 SMART SM00530 8 63 1.2E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS14400 17b936c7c8f70e406e02749a45697ba2 143 Gene3D G3DSA:1.10.260.40 7 68 3.5E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS14400 17b936c7c8f70e406e02749a45697ba2 143 SUPERFAMILY SSF47413 5 68 8.04E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS14400 17b936c7c8f70e406e02749a45697ba2 143 Pfam PF13560 Helix-turn-helix domain 8 59 2.8E-11 T 22-04-2016 TMO_RS12260 9158d645e4dc1722c8f4d4989c9ac0a1 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 314 1.7E-41 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS12260 9158d645e4dc1722c8f4d4989c9ac0a1 343 PANTHER PTHR33376 1 343 6.0E-44 T 22-04-2016 TMO_RS03405 73f88b87fcc66a39197e3bf0f02d3fc2 127 SUPERFAMILY SSF88723 2 124 5.61E-15 T 22-04-2016 IPR029060 PIN domain-like TMO_RS03405 73f88b87fcc66a39197e3bf0f02d3fc2 127 Pfam PF01850 PIN domain 2 115 8.1E-9 T 22-04-2016 IPR002716 PIN domain TMO_RS03405 73f88b87fcc66a39197e3bf0f02d3fc2 127 Gene3D G3DSA:3.40.50.1010 2 124 9.8E-9 T 22-04-2016 IPR029060 PIN domain-like TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 237 2.9E-63 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 35.964 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 Gene3D G3DSA:3.40.1210.10 1 248 2.6E-80 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 SUPERFAMILY SSF64167 2 249 3.14E-79 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 Pfam PF01975 Survival protein SurE 3 185 4.5E-53 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 TMO_RS07745 49a2d0784fd6848da26a17e753715b28 251 PANTHER PTHR30457 2 249 1.3E-77 T 22-04-2016 TMO_RS05405 04aa4b451474ba16f01930531a21e0f4 159 Gene3D G3DSA:1.20.1290.10 26 150 7.1E-26 T 22-04-2016 IPR029032 AhpD-like TMO_RS05405 04aa4b451474ba16f01930531a21e0f4 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 81 1.1E-7 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS05405 04aa4b451474ba16f01930531a21e0f4 159 SUPERFAMILY SSF69118 27 151 9.03E-25 T 22-04-2016 IPR029032 AhpD-like TMO_RS05405 04aa4b451474ba16f01930531a21e0f4 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 106 4.7E-10 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS17445 91172991a4b52048e96124067cefe35c 293 Gene3D G3DSA:1.25.40.10 191 266 1.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS17445 91172991a4b52048e96124067cefe35c 293 Pfam PF13371 Tetratricopeptide repeat 214 282 3.1E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS17445 91172991a4b52048e96124067cefe35c 293 PANTHER PTHR31350:SF1 83 293 2.6E-26 T 22-04-2016 TMO_RS17445 91172991a4b52048e96124067cefe35c 293 Pfam PF13369 Transglutaminase-like superfamily 76 211 1.7E-38 T 22-04-2016 IPR032698 Protein SirB1, N-terminal TMO_RS17445 91172991a4b52048e96124067cefe35c 293 SUPERFAMILY SSF48452 192 264 4.69E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS17445 91172991a4b52048e96124067cefe35c 293 PANTHER PTHR31350 83 293 2.6E-26 T 22-04-2016 TMO_RS17250 5066a1aa7ea4b4c0156b2790d5547f65 364 Pfam PF13609 Gram-negative porin 12 344 8.6E-47 T 22-04-2016 TMO_RS17250 5066a1aa7ea4b4c0156b2790d5547f65 364 Gene3D G3DSA:2.40.160.10 31 364 1.1E-41 T 22-04-2016 IPR023614 Porin domain TMO_RS17250 5066a1aa7ea4b4c0156b2790d5547f65 364 SUPERFAMILY SSF56935 20 364 3.89E-29 T 22-04-2016 TMO_RS14535 20f33c93953fd537db4bf5e1ee399c90 394 PANTHER PTHR41519:SF1 5 384 1.4E-21 T 22-04-2016 TMO_RS14535 20f33c93953fd537db4bf5e1ee399c90 394 PANTHER PTHR41519 5 384 1.4E-21 T 22-04-2016 TMO_RS14535 20f33c93953fd537db4bf5e1ee399c90 394 SUPERFAMILY SSF75011 102 250 8.24E-5 T 22-04-2016 TMO_RS14535 20f33c93953fd537db4bf5e1ee399c90 394 Pfam PF13449 Esterase-like activity of phytase 55 367 1.4E-62 T 22-04-2016 IPR027372 Phytase-like domain TMO_RS02230 17aaf22b40f6fb77608e09b24313110d 368 SUPERFAMILY SSF53850 44 364 2.88E-44 T 22-04-2016 TMO_RS02230 17aaf22b40f6fb77608e09b24313110d 368 Pfam PF13416 Bacterial extracellular solute-binding protein 64 335 7.9E-41 T 22-04-2016 TMO_RS02230 17aaf22b40f6fb77608e09b24313110d 368 PANTHER PTHR30006 1 366 1.4E-16 T 22-04-2016 TMO_RS02230 17aaf22b40f6fb77608e09b24313110d 368 Gene3D G3DSA:3.40.190.10 152 308 1.5E-29 T 22-04-2016 TMO_RS04745 1c8001fdfbd8bf7aa193dc9a7be6ea67 311 Pfam PF03547 Membrane transport protein 160 304 4.1E-11 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 TMO_RS04745 1c8001fdfbd8bf7aa193dc9a7be6ea67 311 Pfam PF03547 Membrane transport protein 9 151 4.2E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 TMO_RS04745 1c8001fdfbd8bf7aa193dc9a7be6ea67 311 PANTHER PTHR36838 1 311 1.4E-34 T 22-04-2016 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 PANTHER PTHR21109:SF3 2 68 6.1E-32 T 22-04-2016 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 2.0E-8 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 1.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 1.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 1.3E-5 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 Pfam PF01165 Ribosomal protein S21 2 55 3.4E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 13.901 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 56 6.7E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 TMO_RS04215 35e22c93184009f3b570e7db41d57a64 68 PANTHER PTHR21109 2 68 6.1E-32 T 22-04-2016 TMO_RS14695 aaa298896c21df0d83cc0276a3c3a2ad 277 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 22 258 2.9E-81 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 TMO_RS14695 aaa298896c21df0d83cc0276a3c3a2ad 277 PIRSF PIRSF018982 5 268 3.9E-84 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 TMO_RS14695 aaa298896c21df0d83cc0276a3c3a2ad 277 PANTHER PTHR39330 22 275 3.3E-82 T 22-04-2016 TMO_RS28975 7f576eac6f4a2b04dc4318031d4c0623 375 PANTHER PTHR40659 242 371 9.3E-29 T 22-04-2016 TMO_RS28975 7f576eac6f4a2b04dc4318031d4c0623 375 PANTHER PTHR40659 26 223 9.3E-29 T 22-04-2016 TMO_RS28975 7f576eac6f4a2b04dc4318031d4c0623 375 Pfam PF03824 High-affinity nickel-transport protein 97 364 6.4E-36 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 TMO_RS01840 f3a3da42c17af69b6481ad1d206eed03 233 Pfam PF04172 LrgB-like family 17 229 1.7E-69 T 22-04-2016 IPR007300 CidB/LrgB family TMO_RS01840 f3a3da42c17af69b6481ad1d206eed03 233 PANTHER PTHR30249:SF4 11 231 6.2E-85 T 22-04-2016 TMO_RS01840 f3a3da42c17af69b6481ad1d206eed03 233 PANTHER PTHR30249 11 231 6.2E-85 T 22-04-2016 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 164 9.1E-49 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 Gene3D G3DSA:3.40.50.1470 1 183 2.0E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 PANTHER PTHR17224:SF1 1 198 7.4E-72 T 22-04-2016 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 32.303 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 Pfam PF01195 Peptidyl-tRNA hydrolase 3 172 3.8E-50 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 PANTHER PTHR17224 1 198 7.4E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS01580 5d669970cf5391ed44395a2eaf4a5435 216 SUPERFAMILY SSF53178 1 183 9.81E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 TMO_RS09130 39b0ddbe76ba6050742300b6b9748875 188 Pfam PF04355 SmpA / OmlA family 56 129 6.1E-16 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 TMO_RS17120 4d73e3c4a3161d3da22e418ff114b208 284 Gene3D G3DSA:3.40.710.10 20 250 7.1E-63 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS17120 4d73e3c4a3161d3da22e418ff114b208 284 Pfam PF00905 Penicillin binding protein transpeptidase domain 30 240 3.9E-33 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 TMO_RS17120 4d73e3c4a3161d3da22e418ff114b208 284 SUPERFAMILY SSF56601 25 239 2.32E-27 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like TMO_RS17120 4d73e3c4a3161d3da22e418ff114b208 284 ProSitePatterns PS00337 Beta-lactamase class-D active site. 53 63 - T 22-04-2016 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 SUPERFAMILY SSF88659 100 157 3.92E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 Pfam PF08281 Sigma-70, region 4 103 155 3.9E-14 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 Pfam PF04542 Sigma-70 region 2 15 74 2.8E-13 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 SUPERFAMILY SSF88946 14 89 5.49E-18 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 PANTHER PTHR30173 15 161 2.7E-33 T 22-04-2016 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 156 1.7E-21 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 Gene3D G3DSA:1.10.1740.10 16 74 4.3E-20 T 22-04-2016 TMO_RS08480 38f1d7555c8f86565a277e0cbe6cc7e4 186 Gene3D G3DSA:1.10.10.10 101 158 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS14320 98434dfe3c90d296ec6f2b3a4d1693a5 273 Pfam PF01522 Polysaccharide deacetylase 44 149 7.4E-24 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_RS14320 98434dfe3c90d296ec6f2b3a4d1693a5 273 PANTHER PTHR10587 10 160 1.3E-32 T 22-04-2016 TMO_RS14320 98434dfe3c90d296ec6f2b3a4d1693a5 273 SUPERFAMILY SSF88713 5 265 2.43E-64 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 TMO_RS14320 98434dfe3c90d296ec6f2b3a4d1693a5 273 Gene3D G3DSA:3.20.20.370 11 265 1.1E-76 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 TMO_RS14005 b18741490979890f3e08bb3e91d3e9f8 134 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 42 93 1.4E-15 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter TMO_RS10215 e93cc926dc58d1b969159c02fee4388f 277 PANTHER PTHR30622:SF3 2 272 6.9E-127 T 22-04-2016 TMO_RS10215 e93cc926dc58d1b969159c02fee4388f 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 3.4E-79 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_RS10215 e93cc926dc58d1b969159c02fee4388f 277 PANTHER PTHR30622 2 272 6.9E-127 T 22-04-2016 TMO_RS10215 e93cc926dc58d1b969159c02fee4388f 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 17.742 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_RS10215 e93cc926dc58d1b969159c02fee4388f 277 Pfam PF02673 Bacitracin resistance protein BacA 9 258 9.5E-78 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 TMO_RS08155 40ed171b7802198f7547febb555c0e66 172 Pfam PF14760 Rnk N-terminus 46 86 7.4E-6 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PANTHER PTHR22807:SF30 23 419 2.8E-75 T 22-04-2016 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 Gene3D G3DSA:1.10.940.10 3 133 3.9E-26 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 Pfam PF01189 16S rRNA methyltransferase RsmB/F 218 415 2.0E-45 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 341 357 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 239 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 417 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 303 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 200 214 1.5E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 Pfam PF01029 NusB family 8 110 2.3E-14 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 SUPERFAMILY SSF48013 3 133 8.34E-23 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 SUPERFAMILY SSF53335 128 417 2.48E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 PANTHER PTHR22807 23 419 2.8E-75 T 22-04-2016 TMO_RS00530 b55a45d81320dc57df0a4133ab25d979 421 Gene3D G3DSA:3.40.50.150 211 417 7.4E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS01225 0b79084b6152c3fcb0e489af3187e26d 2224 Pfam PF03797 Autotransporter beta-domain 1933 2208 2.9E-42 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01225 0b79084b6152c3fcb0e489af3187e26d 2224 SMART SM00869 1934 2214 1.0E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01225 0b79084b6152c3fcb0e489af3187e26d 2224 SUPERFAMILY SSF103515 1924 2224 6.93E-50 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS01225 0b79084b6152c3fcb0e489af3187e26d 2224 Gene3D G3DSA:2.40.128.130 1912 2224 1.9E-52 T 22-04-2016 IPR005546 Autotransporter beta-domain TMO_RS00470 6f879e421ff7ffc3456bf4f5a48424ba 327 Pfam PF13460 NAD(P)H-binding 13 112 1.1E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00470 6f879e421ff7ffc3456bf4f5a48424ba 327 Gene3D G3DSA:3.40.50.720 6 230 5.1E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00470 6f879e421ff7ffc3456bf4f5a48424ba 327 PANTHER PTHR10366 8 285 5.0E-20 T 22-04-2016 TMO_RS00470 6f879e421ff7ffc3456bf4f5a48424ba 327 SUPERFAMILY SSF51735 9 288 4.08E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS08335 5f99452192ff70fa40b157893830a483 407 Pfam PF07690 Major Facilitator Superfamily 20 247 2.8E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS08335 5f99452192ff70fa40b157893830a483 407 Gene3D G3DSA:1.20.1250.20 225 403 3.0E-21 T 22-04-2016 TMO_RS08335 5f99452192ff70fa40b157893830a483 407 SUPERFAMILY SSF103473 10 405 5.62E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS08335 5f99452192ff70fa40b157893830a483 407 Gene3D G3DSA:1.20.1250.20 14 201 3.0E-31 T 22-04-2016 TMO_RS08335 5f99452192ff70fa40b157893830a483 407 PANTHER PTHR11360 13 401 6.6E-101 T 22-04-2016 TMO_RS29395 f9df831f680e7c31ce76488feba25bda 191 Pfam PF05656 Protein of unknown function (DUF805) 77 186 1.8E-26 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 TMO_RS29395 f9df831f680e7c31ce76488feba25bda 191 PANTHER PTHR34980 19 186 3.0E-21 T 22-04-2016 TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 SUPERFAMILY SSF51735 16 261 2.79E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 Gene3D G3DSA:3.40.50.720 15 261 6.3E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 260 1.8E-52 T 22-04-2016 TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 202 0.0013 T 22-04-2016 TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 4.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 8.9E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PANTHER PTHR24322 167 198 2.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS16615 8357513f24a7fa7327892090b45bac02 269 PANTHER PTHR24322 19 151 2.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS01710 436ffaf26c01db429676d32fabdcadac 119 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 108 2.3E-21 T 22-04-2016 IPR009241 Toxin HigB-like TMO_RS01710 436ffaf26c01db429676d32fabdcadac 119 SUPERFAMILY SSF143011 1 84 8.24E-5 T 22-04-2016 TMO_RS12090 93afa23ccecf5d40f0384091967b0b6d 241 Gene3D G3DSA:3.40.50.300 17 152 1.5E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12090 93afa23ccecf5d40f0384091967b0b6d 241 SUPERFAMILY SSF52540 19 222 9.16E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12090 93afa23ccecf5d40f0384091967b0b6d 241 Pfam PF13401 AAA domain 28 136 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS04225 05f64c38c2af8e0d41366c0c0de198cd 257 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 47 228 9.0E-54 T 22-04-2016 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 UniPathway: UPA00232 TMO_RS04225 05f64c38c2af8e0d41366c0c0de198cd 257 Pfam PF08511 COQ9 149 224 1.9E-32 T 22-04-2016 IPR013718 COQ9 UniPathway: UPA00232 TMO_RS04225 05f64c38c2af8e0d41366c0c0de198cd 257 PANTHER PTHR21427 43 230 7.1E-40 T 22-04-2016 TMO_RS29525 565a61ddddbd4ed619c17bd4d0a7893d 610 Gene3D G3DSA:3.30.565.10 475 604 2.5E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29525 565a61ddddbd4ed619c17bd4d0a7893d 610 PANTHER PTHR24421 106 588 2.7E-18 T 22-04-2016 TMO_RS29525 565a61ddddbd4ed619c17bd4d0a7893d 610 SMART SM00387 516 607 2.7E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29525 565a61ddddbd4ed619c17bd4d0a7893d 610 SUPERFAMILY SSF55874 475 604 1.81E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS29525 565a61ddddbd4ed619c17bd4d0a7893d 610 Pfam PF07730 Histidine kinase 421 471 1.4E-4 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 SUPERFAMILY SSF51735 5 239 4.05E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 Gene3D G3DSA:3.40.50.720 7 230 1.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 Pfam PF00106 short chain dehydrogenase 9 198 1.8E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PANTHER PTHR24322 13 142 3.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PANTHER PTHR24322 159 195 3.3E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS04025 c68865a70d4a15ea7b91f1b15cc2c627 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS18385 0a11318610d43afe27048d08099ce1f3 380 Gene3D G3DSA:3.50.50.60 52 107 1.9E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS18385 0a11318610d43afe27048d08099ce1f3 380 Gene3D G3DSA:3.50.50.60 143 247 1.9E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS18385 0a11318610d43afe27048d08099ce1f3 380 SUPERFAMILY SSF51905 45 116 2.3E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS18385 0a11318610d43afe27048d08099ce1f3 380 SUPERFAMILY SSF51905 143 266 2.3E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS14470 9c83beb0544fc88cb82b6d13cb13e01c 321 PANTHER PTHR30238 3 321 1.4E-137 T 22-04-2016 TMO_RS14470 9c83beb0544fc88cb82b6d13cb13e01c 321 PANTHER PTHR30238:SF0 3 321 1.4E-137 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 TMO_RS14470 9c83beb0544fc88cb82b6d13cb13e01c 321 Pfam PF03741 Integral membrane protein TerC family 71 278 3.3E-56 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 TMO_RS14470 9c83beb0544fc88cb82b6d13cb13e01c 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 5 309 2.6E-114 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 TMO_RS04910 d3c08262a7558b71717384c6b498947e 128 SUPERFAMILY SSF54637 3 127 9.74E-28 T 22-04-2016 IPR029069 HotDog domain TMO_RS04910 d3c08262a7558b71717384c6b498947e 128 Gene3D G3DSA:3.10.129.10 12 126 1.7E-34 T 22-04-2016 IPR029069 HotDog domain TMO_RS04910 d3c08262a7558b71717384c6b498947e 128 PANTHER PTHR13078 15 93 1.7E-13 T 22-04-2016 TMO_RS04910 d3c08262a7558b71717384c6b498947e 128 Pfam PF01575 MaoC like domain 14 112 1.5E-23 T 22-04-2016 IPR002539 MaoC-like domain TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 231 5.0E-92 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 Pfam PF00005 ABC transporter 17 160 4.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 SMART SM00382 26 199 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 PANTHER PTHR24220:SF404 3 231 4.4E-98 T 22-04-2016 TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 Gene3D G3DSA:3.40.50.300 1 226 3.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 PANTHER PTHR24220 3 231 4.4E-98 T 22-04-2016 TMO_RS02535 c0c2fb7fff68322a1810d6e5ae923c06 231 SUPERFAMILY SSF52540 2 224 6.63E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 Pfam PF00255 Glutathione peroxidase 52 157 3.0E-27 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 SUPERFAMILY SSF52833 49 205 4.19E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 ProSitePatterns PS00460 Glutathione peroxidases active site. 71 86 - T 22-04-2016 IPR029759 Glutathione peroxidase active site TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 PANTHER PTHR11592:SF40 51 205 4.2E-55 T 22-04-2016 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 167 176 3.1E-10 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 69 86 3.1E-10 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 PRINTS PR01011 Glutathione peroxidase family signature 104 120 3.1E-10 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 PANTHER PTHR11592 51 205 4.2E-55 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 TMO_RS02075 55be539689f708d1e4be59447bf949ed 213 Gene3D G3DSA:3.40.30.10 49 205 2.5E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS15075 6cc34783b93e085c3306ac2ad104056f 235 Pfam PF04340 Protein of unknown function, DUF484 16 230 1.2E-23 T 22-04-2016 IPR007435 Protein of unknown function DUF484 TMO_RS01570 1977706d09aaaf7abadaccf23ebf3533 171 Pfam PF06889 Protein of unknown function (DUF1266) 71 163 1.9E-25 T 22-04-2016 IPR009677 Protein of unknown function DUF1266 TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 PANTHER PTHR22572:SF14 9 286 2.8E-99 T 22-04-2016 TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 Gene3D G3DSA:3.90.550.10 8 273 4.2E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 SUPERFAMILY SSF53448 5 272 2.82E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 7 268 6.4E-108 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 PANTHER PTHR22572 9 286 2.8E-99 T 22-04-2016 TMO_RS02940 a19450e6d7fe238154e4737115cac0a7 299 Pfam PF00483 Nucleotidyl transferase 14 269 1.6E-29 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 TMO_RS00655 f21b2934486e3ec1418e1c14d3c5e8e6 198 Gene3D G3DSA:3.40.30.10 2 193 4.9E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00655 f21b2934486e3ec1418e1c14d3c5e8e6 198 SUPERFAMILY SSF52833 1 189 1.94E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS00655 f21b2934486e3ec1418e1c14d3c5e8e6 198 Pfam PF08534 Redoxin 55 179 5.8E-17 T 22-04-2016 IPR013740 Redoxin GO:0016491 TMO_RS00655 f21b2934486e3ec1418e1c14d3c5e8e6 198 PANTHER PTHR10681:SF125 49 174 2.1E-19 T 22-04-2016 TMO_RS00655 f21b2934486e3ec1418e1c14d3c5e8e6 198 PANTHER PTHR10681 49 174 2.1E-19 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 SUPERFAMILY SSF53067 129 317 5.42E-38 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 SUPERFAMILY SSF53067 4 124 3.24E-33 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 Gene3D G3DSA:3.30.420.40 4 121 1.9E-40 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 133 146 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 Gene3D G3DSA:3.30.420.150 125 318 7.0E-51 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 PANTHER PTHR30005 4 317 2.8E-73 T 22-04-2016 TMO_RS07230 c1dc5daded908a1b4513e61bef30c160 334 Pfam PF02541 Ppx/GppA phosphatase family 23 316 6.5E-50 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 TMO_RS13550 630160b5375607d70847e81997f6a85b 268 SMART SM00342 166 250 0.0055 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS13550 630160b5375607d70847e81997f6a85b 268 Pfam PF12833 Helix-turn-helix domain 173 249 2.2E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 TMO_RS15680 d919e0d36c5a3e2c01bea757f2be3903 96 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 13 92 1.7E-20 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 TMO_RS15680 d919e0d36c5a3e2c01bea757f2be3903 96 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 30 93 6.7E-12 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.4E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 Gene3D G3DSA:1.10.10.60 10 65 2.0E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 SUPERFAMILY SSF46689 11 92 1.8E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 PANTHER PTHR30055 3 191 1.8E-30 T 22-04-2016 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 Gene3D G3DSA:1.10.357.10 66 193 6.8E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 3.0E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 3.0E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS02710 10ec17c4a18a8dc7d024064415bd1d64 196 SUPERFAMILY SSF48498 87 192 9.78E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 Pfam PF02979 Nitrile hydratase, alpha chain 31 213 6.7E-88 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 PIRSF PIRSF001426 8 221 4.2E-96 T 22-04-2016 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 ProDom PD007559 HYDRATASE NITRILE ALPHA SUBUNIT LYASE CHAIN METAL-BINDING DIRECT SEQUENCING NITRILASE 35 211 7.0E-77 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 SUPERFAMILY SSF56209 18 213 1.83E-84 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 TIGRFAM TIGR01323 nitrile_alph: nitrile hydratase, alpha subunit 31 213 5.4E-93 T 22-04-2016 IPR018141 Nitrile hydratase, alpha subunit GO:0006807|GO:0018822|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS02330 ac66384665ad8020d6ee4d362734a0e1 224 Gene3D G3DSA:3.90.330.10 7 216 1.0E-95 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS06680 17fa478dae936f6633d035414a9a1dda 213 Pfam PF01810 LysE type translocator 16 208 1.4E-16 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS06680 17fa478dae936f6633d035414a9a1dda 213 PANTHER PTHR30086 2 211 5.9E-24 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS06680 17fa478dae936f6633d035414a9a1dda 213 PANTHER PTHR30086:SF6 2 211 5.9E-24 T 22-04-2016 TMO_RS01465 87f577a97a54855c995bcb3f576aa959 282 PANTHER PTHR11941 1 263 6.5E-89 T 22-04-2016 TMO_RS01465 87f577a97a54855c995bcb3f576aa959 282 PANTHER PTHR11941:SF95 1 263 6.5E-89 T 22-04-2016 TMO_RS01465 87f577a97a54855c995bcb3f576aa959 282 SUPERFAMILY SSF52096 3 264 4.02E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS01465 87f577a97a54855c995bcb3f576aa959 282 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 265 4.9E-51 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS01465 87f577a97a54855c995bcb3f576aa959 282 Gene3D G3DSA:3.90.226.10 3 263 1.6E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS07930 6a348d060e14c36f88189b3a111d2534 211 SUPERFAMILY SSF54427 76 207 3.19E-20 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS07930 6a348d060e14c36f88189b3a111d2534 211 Pfam PF13474 SnoaL-like domain 108 205 3.4E-9 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain TMO_RS07930 6a348d060e14c36f88189b3a111d2534 211 Gene3D G3DSA:3.10.450.50 82 204 3.3E-11 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS05230 2a851910c607ac3746280b592aeb7079 167 Pfam PF06172 Cupin superfamily (DUF985) 19 151 4.2E-42 T 22-04-2016 IPR009327 Cupin domain of unknown function DUF985 TMO_RS05230 2a851910c607ac3746280b592aeb7079 167 SUPERFAMILY SSF51182 12 158 5.79E-51 T 22-04-2016 IPR011051 RmlC-like cupin domain TMO_RS05230 2a851910c607ac3746280b592aeb7079 167 PANTHER PTHR33387 4 156 9.4E-43 T 22-04-2016 TMO_RS05230 2a851910c607ac3746280b592aeb7079 167 Gene3D G3DSA:2.60.120.10 11 156 9.5E-49 T 22-04-2016 IPR014710 RmlC-like jelly roll fold TMO_RS05270 649438b6688c48dc7bca856393b45696 407 PANTHER PTHR34219 1 392 8.1E-73 T 22-04-2016 TMO_RS05270 649438b6688c48dc7bca856393b45696 407 PANTHER PTHR34219:SF1 1 392 8.1E-73 T 22-04-2016 TMO_RS05270 649438b6688c48dc7bca856393b45696 407 Pfam PF03929 PepSY-associated TM region 7 383 9.3E-52 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 PANTHER PTHR19211 20 252 1.5E-107 T 22-04-2016 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 PANTHER PTHR19211 288 516 1.5E-107 T 22-04-2016 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 Gene3D G3DSA:3.40.50.300 356 515 2.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 SUPERFAMILY SSF52540 19 219 2.71E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 SMART SM00382 361 522 2.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 SMART SM00382 32 222 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 Gene3D G3DSA:3.40.50.300 22 256 2.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 Pfam PF00005 ABC transporter 357 482 2.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 Pfam PF00005 ABC transporter 34 171 6.6E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS00985 55ebc134a0329bb31ce25f4194b60d5e 526 SUPERFAMILY SSF52540 356 515 8.79E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08505 c28f1fa9fd3a46848b2bc58e38d134a6 238 SUPERFAMILY SSF52540 58 214 6.1E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08505 c28f1fa9fd3a46848b2bc58e38d134a6 238 Gene3D G3DSA:3.40.50.300 57 212 6.4E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS08505 c28f1fa9fd3a46848b2bc58e38d134a6 238 PANTHER PTHR30153 57 217 7.8E-20 T 22-04-2016 TMO_RS08505 c28f1fa9fd3a46848b2bc58e38d134a6 238 Pfam PF03796 DnaB-like helicase C terminal domain 57 116 1.8E-9 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 TMO_RS08505 c28f1fa9fd3a46848b2bc58e38d134a6 238 Pfam PF03796 DnaB-like helicase C terminal domain 121 211 1.3E-7 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 PANTHER PTHR21256:SF2 15 157 2.3E-31 T 22-04-2016 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 Gene3D G3DSA:3.40.50.1980 53 158 2.0E-21 T 22-04-2016 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 PANTHER PTHR21256 15 157 2.3E-31 T 22-04-2016 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 Pfam PF00815 Histidinol dehydrogenase 42 159 2.3E-28 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 SUPERFAMILY SSF53720 47 156 6.87E-8 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 PRINTS PR00083 Histidinol dehydrogenase signature 131 158 2.3E-13 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS20040 6c0fb0be0042d1b3b9b1571b246fd5b3 160 PRINTS PR00083 Histidinol dehydrogenase signature 55 79 2.3E-13 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 Gene3D G3DSA:3.40.50.300 1 234 1.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 SUPERFAMILY SSF52540 2 230 1.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.7E-108 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 PANTHER PTHR24220:SF85 3 251 2.0E-128 T 22-04-2016 TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 SMART SM00382 26 238 2.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 PANTHER PTHR24220 3 251 2.0E-128 T 22-04-2016 TMO_RS00555 dc8554390e23bee8f7f76b05c3f34174 252 Pfam PF00005 ABC transporter 17 172 4.8E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS12805 814a6b4ec981a7815d0ad9b94c6159b3 308 PANTHER PTHR31752:SF13 12 18 8.1E-33 T 22-04-2016 TMO_RS12805 814a6b4ec981a7815d0ad9b94c6159b3 308 PANTHER PTHR31752:SF13 119 308 8.1E-33 T 22-04-2016 TMO_RS12805 814a6b4ec981a7815d0ad9b94c6159b3 308 Pfam PF03547 Membrane transport protein 163 302 1.7E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 TMO_RS12805 814a6b4ec981a7815d0ad9b94c6159b3 308 PANTHER PTHR31752 12 18 8.1E-33 T 22-04-2016 TMO_RS12805 814a6b4ec981a7815d0ad9b94c6159b3 308 PANTHER PTHR31752 119 308 8.1E-33 T 22-04-2016 TMO_RS00720 7890190643cf8c4687f3a5118b7a9829 335 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 24 325 1.6E-68 T 22-04-2016 IPR018666 Protein of unknown function DUF2125 TMO_RS11085 51de38ae08016a7f417b5ef29d8608f7 303 Gene3D G3DSA:1.10.530.10 64 186 6.1E-42 T 22-04-2016 TMO_RS11085 51de38ae08016a7f417b5ef29d8608f7 303 PANTHER PTHR21666 48 187 1.3E-34 T 22-04-2016 TMO_RS11085 51de38ae08016a7f417b5ef29d8608f7 303 SUPERFAMILY SSF53955 63 184 2.85E-40 T 22-04-2016 IPR023346 Lysozyme-like domain TMO_RS11085 51de38ae08016a7f417b5ef29d8608f7 303 Pfam PF01464 Transglycosylase SLT domain 70 168 7.3E-26 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 TMO_RS13465 7f2036b10e1bb0b511d01ec4b4e7289b 520 Gene3D G3DSA:3.30.420.10 292 503 6.4E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS13465 7f2036b10e1bb0b511d01ec4b4e7289b 520 SUPERFAMILY SSF53098 12 175 7.84E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS13465 7f2036b10e1bb0b511d01ec4b4e7289b 520 SUPERFAMILY SSF53098 219 520 7.84E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 TMO_RS08005 5522054f65374929887ad4c2c068e663 200 Pfam PF00156 Phosphoribosyl transferase domain 51 167 2.1E-12 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_RS08005 5522054f65374929887ad4c2c068e663 200 PANTHER PTHR19278 4 173 1.3E-26 T 22-04-2016 TMO_RS08005 5522054f65374929887ad4c2c068e663 200 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 197 1.7E-70 T 22-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS08005 5522054f65374929887ad4c2c068e663 200 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 200 26.065 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 TMO_RS08005 5522054f65374929887ad4c2c068e663 200 SUPERFAMILY SSF53271 4 194 1.85E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS08005 5522054f65374929887ad4c2c068e663 200 Gene3D G3DSA:3.40.50.2020 4 186 1.1E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS12450 85b07e2e240d782b1d2a774772d7cf44 160 Pfam PF02643 Uncharacterized ACR, COG1430 51 153 1.7E-31 T 22-04-2016 IPR003795 Protein of unknown function DUF192 TMO_RS12450 85b07e2e240d782b1d2a774772d7cf44 160 PANTHER PTHR37953 50 160 1.5E-30 T 22-04-2016 TMO_RS12450 85b07e2e240d782b1d2a774772d7cf44 160 PANTHER PTHR37953:SF1 50 160 1.5E-30 T 22-04-2016 TMO_RS10575 89d4207f4d88f5e702c8b2fe2452ae88 163 Pfam PF06754 Phosphonate metabolism protein PhnG 17 162 6.4E-51 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 TMO_RS10575 89d4207f4d88f5e702c8b2fe2452ae88 163 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 16 163 1.4E-49 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 PANTHER PTHR30435 444 567 4.0E-75 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 PANTHER PTHR30435 4 131 4.0E-75 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 487 564 1.5E-19 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF00460 Flagella basal body rod protein 9 39 3.0E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 310 547 9.4E-44 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 8 309 2.3E-45 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 SUPERFAMILY SSF117143 84 195 3.14E-61 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 SUPERFAMILY SSF117143 314 527 3.14E-61 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 PANTHER PTHR30435:SF1 444 567 4.0E-75 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 PANTHER PTHR30435:SF1 4 131 4.0E-75 T 22-04-2016 TMO_RS06290 8e54226318ff7a81fb05200061d52ce7 567 Pfam PF07559 Flagellar basal body protein FlaE 323 446 6.7E-14 T 22-04-2016 IPR011491 Flagellar hook protein FlgE TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 PANTHER PTHR33376:SF7 2 326 4.0E-162 T 22-04-2016 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 272 6.1E-88 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 311 9.5E-110 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 SUPERFAMILY SSF53850 47 118 7.11E-5 T 22-04-2016 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 SUPERFAMILY SSF53850 152 255 7.11E-5 T 22-04-2016 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 PIRSF PIRSF006470 1 328 1.8E-133 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 TMO_RS01245 6a999f8787be0151c0a28563e50b41d3 329 PANTHER PTHR33376 2 326 4.0E-162 T 22-04-2016 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 PANTHER PTHR20275:SF7 37 259 6.2E-89 T 22-04-2016 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 PANTHER PTHR20275 37 259 6.2E-89 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 Pfam PF01513 ATP-NAD kinase 30 186 4.8E-17 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 Hamap MF_00361 NAD kinase [nadK]. 9 260 19.509 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 SUPERFAMILY SSF111331 31 245 4.19E-52 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 Gene3D G3DSA:2.60.200.30 116 231 9.7E-26 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 TMO_RS06130 c21693e235d0753511338093e9cd13fd 260 Gene3D G3DSA:3.40.50.10330 31 115 1.2E-18 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 TMO_RS11130 6c64a5011f265478505dd7147b954f9e 85 SUPERFAMILY SSF47413 1 71 1.61E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS11130 6c64a5011f265478505dd7147b954f9e 85 PANTHER PTHR10245 3 72 3.1E-15 T 22-04-2016 TMO_RS11130 6c64a5011f265478505dd7147b954f9e 85 Pfam PF01381 Helix-turn-helix 11 63 2.4E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS11130 6c64a5011f265478505dd7147b954f9e 85 Gene3D G3DSA:1.10.260.40 1 74 2.7E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS11130 6c64a5011f265478505dd7147b954f9e 85 SMART SM00530 10 65 3.6E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS16640 abeab06676f24b169c84c2f892e2825c 260 Gene3D G3DSA:3.20.20.190 20 256 5.0E-63 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 TMO_RS16640 abeab06676f24b169c84c2f892e2825c 260 PANTHER PTHR23344 21 256 1.3E-57 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 TMO_RS16640 abeab06676f24b169c84c2f892e2825c 260 PANTHER PTHR23344:SF20 21 256 1.3E-57 T 22-04-2016 TMO_RS16640 abeab06676f24b169c84c2f892e2825c 260 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 24 253 2.1E-42 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 TMO_RS16640 abeab06676f24b169c84c2f892e2825c 260 SUPERFAMILY SSF51695 20 256 8.63E-64 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 TMO_RS15400 c19f5dbd3a038bf2c695e5e73bbc522e 165 SMART SM01058 5 115 2.2E-30 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS15400 c19f5dbd3a038bf2c695e5e73bbc522e 165 PANTHER PTHR38447 1 146 1.1E-40 T 22-04-2016 TMO_RS15400 c19f5dbd3a038bf2c695e5e73bbc522e 165 SUPERFAMILY SSF141259 5 64 5.62E-14 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS15400 c19f5dbd3a038bf2c695e5e73bbc522e 165 Pfam PF02559 CarD-like/TRCF domain 7 113 1.2E-14 T 22-04-2016 IPR003711 CarD-like/TRCF domain TMO_RS08085 98d551547519b634ee07ad6d479399df 366 PANTHER PTHR33376:SF5 1 345 6.2E-99 T 22-04-2016 TMO_RS08085 98d551547519b634ee07ad6d479399df 366 PANTHER PTHR33376 1 345 6.2E-99 T 22-04-2016 TMO_RS08085 98d551547519b634ee07ad6d479399df 366 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 317 1.3E-42 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS08085 98d551547519b634ee07ad6d479399df 366 PIRSF PIRSF039026 1 360 1.3E-118 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 PANTHER PTHR23088 1 269 6.2E-66 T 22-04-2016 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 Pfam PF00795 Carbon-nitrogen hydrolase 295 541 4.7E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 Pfam PF00795 Carbon-nitrogen hydrolase 7 247 4.8E-47 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 Gene3D G3DSA:3.60.110.10 5 267 2.8E-73 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 Gene3D G3DSA:3.60.110.10 293 544 2.3E-58 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 SUPERFAMILY SSF56317 5 266 2.75E-70 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS02530 2fc46ae107363a8ac9958d36a61ca0cd 575 SUPERFAMILY SSF56317 293 543 1.83E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 TMO_RS14290 c3a7be5f4b287ff82e953e4490c9ff41 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 21 292 1.1E-46 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 TMO_RS14290 c3a7be5f4b287ff82e953e4490c9ff41 294 PANTHER PTHR30606 13 292 2.2E-61 T 22-04-2016 TMO_RS14290 c3a7be5f4b287ff82e953e4490c9ff41 294 PANTHER PTHR30606:SF2 13 292 2.2E-61 T 22-04-2016 TMO_RS10940 e90dc33a5d94c190645bc2202ba5b76f 217 Pfam PF07751 Abi-like protein 19 163 4.5E-6 T 22-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like TMO_RS11460 649c1699c511bb8a992d8a88d4e81ea2 144 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 15 140 3.4E-11 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 TMO_RS01090 71df973a799e3e81fcd95db5997c9863 186 SUPERFAMILY SSF88874 1 176 4.84E-40 T 22-04-2016 TMO_RS01090 71df973a799e3e81fcd95db5997c9863 186 PANTHER PTHR34720 1 184 2.6E-36 T 22-04-2016 TMO_RS01090 71df973a799e3e81fcd95db5997c9863 186 Pfam PF07484 Phage Tail Collar Domain 7 63 2.7E-21 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS01090 71df973a799e3e81fcd95db5997c9863 186 Gene3D G3DSA:3.90.1340.10 1 69 1.4E-23 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS12875 64d96fe511eff02eeb49ab261c05ac09 198 Pfam PF07310 PAS domain 23 147 3.0E-11 T 22-04-2016 IPR009922 Protein of unknown function DUF1457 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 27 402 3.8E-72 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 PANTHER PTHR23502 25 403 6.2E-83 T 22-04-2016 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 Gene3D G3DSA:1.20.1250.20 235 404 3.9E-9 T 22-04-2016 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 Gene3D G3DSA:1.20.1250.20 25 209 5.4E-30 T 22-04-2016 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 PANTHER PTHR23502:SF19 25 403 6.2E-83 T 22-04-2016 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 Pfam PF07690 Major Facilitator Superfamily 34 375 2.1E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS10660 0f3c8024a806bf78824ae3266553bf3b 416 SUPERFAMILY SSF103473 19 403 2.09E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS12340 3d6833dbb3a534ba7fcb976f8c4fee86 172 Gene3D G3DSA:3.90.960.10 17 167 7.9E-44 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS12340 3d6833dbb3a534ba7fcb976f8c4fee86 172 SUPERFAMILY SSF55826 19 165 1.83E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS12340 3d6833dbb3a534ba7fcb976f8c4fee86 172 PANTHER PTHR30411:SF1 13 166 1.3E-22 T 22-04-2016 TMO_RS12340 3d6833dbb3a534ba7fcb976f8c4fee86 172 PANTHER PTHR30411 13 166 1.3E-22 T 22-04-2016 TMO_RS12340 3d6833dbb3a534ba7fcb976f8c4fee86 172 Pfam PF04073 Aminoacyl-tRNA editing domain 39 157 8.8E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 TMO_RS12335 e5a9916f49bab6a77cd39e0e0f4f0878 171 SUPERFAMILY SSF101738 3 114 4.71E-42 T 22-04-2016 IPR007481 Stringent starvation protein B TMO_RS12335 e5a9916f49bab6a77cd39e0e0f4f0878 171 Gene3D G3DSA:2.30.30.220 3 115 4.5E-48 T 22-04-2016 IPR007481 Stringent starvation protein B TMO_RS12335 e5a9916f49bab6a77cd39e0e0f4f0878 171 Pfam PF04386 Stringent starvation protein B 9 163 1.9E-47 T 22-04-2016 IPR007481 Stringent starvation protein B TMO_RS00890 19ae5d89a2ad7dac8fbc56add10dc4b9 135 Gene3D G3DSA:3.40.50.510 1 129 1.6E-42 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TMO_RS00890 19ae5d89a2ad7dac8fbc56add10dc4b9 135 Pfam PF03610 PTS system fructose IIA component 3 114 3.9E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TMO_RS00890 19ae5d89a2ad7dac8fbc56add10dc4b9 135 SUPERFAMILY SSF53062 1 129 5.49E-38 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 TMO_RS00890 19ae5d89a2ad7dac8fbc56add10dc4b9 135 PANTHER PTHR33799 2 130 2.9E-44 T 22-04-2016 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 Gene3D G3DSA:1.10.260.40 15 78 1.3E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 SMART SM00530 18 73 4.0E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 PANTHER PTHR10245 9 102 5.6E-22 T 22-04-2016 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 Pfam PF01381 Helix-turn-helix 19 73 1.5E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 PANTHER PTHR10245:SF38 9 102 5.6E-22 T 22-04-2016 TMO_RS01730 1306d5e4847857b79a2a83ccf3baaa02 122 SUPERFAMILY SSF47413 4 79 2.82E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS05330 def5ab5de45903dbc48b5ff0012e35e4 209 PANTHER PTHR30086 8 207 2.3E-65 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS05330 def5ab5de45903dbc48b5ff0012e35e4 209 Pfam PF01810 LysE type translocator 21 200 1.2E-20 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS05330 def5ab5de45903dbc48b5ff0012e35e4 209 PANTHER PTHR30086:SF12 8 207 2.3E-65 T 22-04-2016 TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 233 315 3.9E-11 T 22-04-2016 IPR012334 Pectin lyase fold TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 103 187 3.9E-11 T 22-04-2016 IPR012334 Pectin lyase fold TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 391 392 3.9E-11 T 22-04-2016 IPR012334 Pectin lyase fold TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 Gene3D G3DSA:2.160.20.10 461 555 3.9E-11 T 22-04-2016 IPR012334 Pectin lyase fold TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SUPERFAMILY SSF51126 483 568 6.2E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SUPERFAMILY SSF51126 233 288 6.2E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SUPERFAMILY SSF51126 97 185 6.2E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SUPERFAMILY SSF51126 388 426 6.2E-12 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 515 542 370.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 171 199 3500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 493 514 480.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 240 261 740.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat TMO_RS13590 d67e3a96bdbd24f7378a6aa34efa26ad 584 SMART SM00710 267 314 3500.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat TMO_RS00255 1dc3cf7b7f4f8fa625210123c88342e0 536 Pfam PF12236 Bacteriophage head to tail connecting protein 18 488 1.2E-124 T 22-04-2016 IPR020991 Head-to-tail joining protein, podovirus-type TMO_RS01070 6113e732c508aa0ff0c228619b295226 193 Gene3D G3DSA:3.40.630.30 7 161 1.5E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS01070 6113e732c508aa0ff0c228619b295226 193 Pfam PF00583 Acetyltransferase (GNAT) family 87 159 4.1E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS01070 6113e732c508aa0ff0c228619b295226 193 SUPERFAMILY SSF55729 13 162 1.17E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS11705 fcb12600bffedc5ad3c469fa2b5ecc6c 173 Pfam PF05163 DinB family 9 164 4.8E-30 T 22-04-2016 IPR007837 DNA damage-inducible protein DinB TMO_RS11705 fcb12600bffedc5ad3c469fa2b5ecc6c 173 SUPERFAMILY SSF109854 6 147 5.13E-30 T 22-04-2016 TMO_RS11705 fcb12600bffedc5ad3c469fa2b5ecc6c 173 PANTHER PTHR37302:SF2 2 170 1.0E-20 T 22-04-2016 TMO_RS11705 fcb12600bffedc5ad3c469fa2b5ecc6c 173 PANTHER PTHR37302 2 170 1.0E-20 T 22-04-2016 TMO_RS11705 fcb12600bffedc5ad3c469fa2b5ecc6c 173 Gene3D G3DSA:1.20.120.450 1 162 2.3E-32 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase TMO_RS01085 32aad0a032eeaf9ecb7bc6f164cb5227 183 PANTHER PTHR34720 1 182 7.7E-44 T 22-04-2016 TMO_RS01085 32aad0a032eeaf9ecb7bc6f164cb5227 183 SUPERFAMILY SSF88874 2 177 1.31E-42 T 22-04-2016 TMO_RS01085 32aad0a032eeaf9ecb7bc6f164cb5227 183 Pfam PF07484 Phage Tail Collar Domain 6 61 2.1E-23 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS01085 32aad0a032eeaf9ecb7bc6f164cb5227 183 Gene3D G3DSA:3.90.1340.10 2 67 2.8E-27 T 22-04-2016 IPR011083 Phage tail collar domain TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 Gene3D G3DSA:3.40.50.2020 2 172 2.4E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 7.8E-60 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 PANTHER PTHR32315 3 172 4.2E-75 T 22-04-2016 TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 Pfam PF00156 Phosphoribosyl transferase domain 37 148 5.5E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 34.163 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 TMO_RS04970 096b1744528a7606ee621dacc473b8f8 174 SUPERFAMILY SSF53271 3 161 5.64E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like TMO_RS16445 ccaf740676a055165205a34f60555ca6 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 4.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS16445 ccaf740676a055165205a34f60555ca6 227 SUPERFAMILY SSF48498 97 212 6.82E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS16445 ccaf740676a055165205a34f60555ca6 227 SUPERFAMILY SSF46689 17 92 6.67E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS16445 ccaf740676a055165205a34f60555ca6 227 Gene3D G3DSA:1.10.357.10 16 219 2.5E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS16445 ccaf740676a055165205a34f60555ca6 227 PANTHER PTHR30328 1 196 1.1E-17 T 22-04-2016 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 38 69 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site TMO_RS14820 3df11e9ea558935273c6f70803680646 217 PANTHER PTHR30055 5 202 2.6E-25 T 22-04-2016 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 5.8E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 8.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 8.5E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 SUPERFAMILY SSF46689 13 87 9.48E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS14820 3df11e9ea558935273c6f70803680646 217 Gene3D G3DSA:1.10.357.10 8 206 1.5E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 Gene3D G3DSA:3.40.50.2300 164 305 1.2E-17 T 22-04-2016 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 PANTHER PTHR30483 7 405 2.1E-217 T 22-04-2016 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 Gene3D G3DSA:3.40.50.2300 29 151 5.8E-31 T 22-04-2016 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 Gene3D G3DSA:3.40.50.2300 306 356 5.8E-31 T 22-04-2016 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 PANTHER PTHR30483:SF17 7 405 2.1E-217 T 22-04-2016 TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 Pfam PF13458 Periplasmic binding protein 32 368 4.3E-87 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS10760 939152b51995ac8b152144d7b7db0458 405 SUPERFAMILY SSF53822 32 403 8.07E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS07635 920602c342485916ab4b8e32fae7b054 100 Gene3D G3DSA:3.90.330.10 18 63 1.4E-7 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS07635 920602c342485916ab4b8e32fae7b054 100 SUPERFAMILY SSF56209 6 65 4.71E-12 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS17320 f98d998c24ac8a9431c36da4910f0e2f 355 SUPERFAMILY SSF53756 16 354 1.49E-60 T 22-04-2016 TMO_RS17320 f98d998c24ac8a9431c36da4910f0e2f 355 Pfam PF00534 Glycosyl transferases group 1 172 332 2.2E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 TMO_RS17320 f98d998c24ac8a9431c36da4910f0e2f 355 PANTHER PTHR12526 123 355 4.1E-48 T 22-04-2016 TMO_RS17320 f98d998c24ac8a9431c36da4910f0e2f 355 Gene3D G3DSA:3.40.50.2000 174 332 9.8E-28 T 22-04-2016 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 PANTHER PTHR30026:SF3 20 455 1.6E-67 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 SUPERFAMILY SSF56954 12 431 4.19E-73 T 22-04-2016 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 Pfam PF02321 Outer membrane efflux protein 248 429 1.2E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 Pfam PF02321 Outer membrane efflux protein 39 225 2.8E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 Gene3D G3DSA:1.20.1600.10 31 431 2.1E-60 T 22-04-2016 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 PANTHER PTHR30026 20 455 1.6E-67 T 22-04-2016 TMO_RS07630 cacaccc30ba25f079557ee8a8e673326 464 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 36 438 8.5E-77 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 TMO_RS06990 5729d4a11ed85e3b1f232b2252d71964 274 SUPERFAMILY SSF161098 10 265 5.42E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06990 5729d4a11ed85e3b1f232b2252d71964 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 261 1.2E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06990 5729d4a11ed85e3b1f232b2252d71964 274 Gene3D G3DSA:1.10.3720.10 16 268 3.2E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06990 5729d4a11ed85e3b1f232b2252d71964 274 PANTHER PTHR30193 9 274 9.3E-42 T 22-04-2016 TMO_RS11245 92dbdf8d19f5de76c9c5495ba4d9e449 206 SUPERFAMILY SSF52200 36 151 2.75E-5 T 22-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 TMO_RS13510 4f9f1a7eff22f36eb072622a26b5f3e6 551 PANTHER PTHR33908 3 418 2.2E-33 T 22-04-2016 TMO_RS13510 4f9f1a7eff22f36eb072622a26b5f3e6 551 PANTHER PTHR33908:SF3 3 418 2.2E-33 T 22-04-2016 TMO_RS13510 4f9f1a7eff22f36eb072622a26b5f3e6 551 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 76 233 2.0E-11 T 22-04-2016 TMO_RS06550 4f3924972cc4d00f955b590a5b1454dd 318 PIRSF PIRSF018266 2 317 1.5E-64 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS06550 4f3924972cc4d00f955b590a5b1454dd 318 PANTHER PTHR30273 5 318 1.5E-42 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS06550 4f3924972cc4d00f955b590a5b1454dd 318 Pfam PF04773 FecR protein 116 205 4.8E-19 T 22-04-2016 IPR006860 FecR protein TMO_RS00945 a6e54faba8a9535a357bfc333997001f 320 Gene3D G3DSA:3.40.50.720 2 229 2.4E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00945 a6e54faba8a9535a357bfc333997001f 320 PANTHER PTHR12126 4 311 4.5E-101 T 22-04-2016 TMO_RS00945 a6e54faba8a9535a357bfc333997001f 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 215 1.9E-16 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 TMO_RS00945 a6e54faba8a9535a357bfc333997001f 320 SUPERFAMILY SSF51735 1 258 1.37E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13430 14281ea66a4ac29f7eaabb03ef6ced94 73 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 65 6.5E-11 T 22-04-2016 TMO_RS13430 14281ea66a4ac29f7eaabb03ef6ced94 73 Gene3D G3DSA:3.40.50.720 21 67 5.2E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13430 14281ea66a4ac29f7eaabb03ef6ced94 73 SUPERFAMILY SSF51735 20 66 8.64E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 SUPERFAMILY SSF53187 31 329 1.36E-33 T 22-04-2016 TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 PANTHER PTHR37326:SF1 3 332 1.2E-38 T 22-04-2016 TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 329 4.3E-29 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 PIRSF PIRSF039012 3 336 1.1E-63 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 PANTHER PTHR37326 3 332 1.2E-38 T 22-04-2016 TMO_RS07160 a4b62324166ee457e00c188278fc6265 339 Gene3D G3DSA:3.40.630.10 8 166 5.1E-17 T 22-04-2016 TMO_RS29145 fb4c4da0cbf3b29cd540336c871e356d 188 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 57 179 4.5E-15 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 Gene3D G3DSA:3.40.50.620 158 279 7.0E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 SUPERFAMILY SSF52402 158 280 2.09E-21 T 22-04-2016 TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 241 253 1.0E-8 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 156 174 1.0E-8 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 PRINTS PR01438 Universal stress protein signature 259 281 1.0E-8 T 22-04-2016 IPR006015 Universal stress protein A TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 Pfam PF00582 Universal stress protein family 158 279 5.9E-12 T 22-04-2016 IPR006016 UspA GO:0006950 TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 Gene3D G3DSA:3.40.50.620 3 123 6.8E-8 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS02755 49068c4ddd1f913cb8d1b38b436691f2 281 SUPERFAMILY SSF52402 1 145 2.18E-11 T 22-04-2016 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Gene3D G3DSA:3.50.50.60 174 225 3.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Gene3D G3DSA:3.50.50.60 1 89 3.5E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 SUPERFAMILY SSF51905 1 254 8.2E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 SUPERFAMILY SSF51905 344 398 8.2E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Pfam PF01593 Flavin containing amine oxidoreductase 343 397 6.1E-9 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 PANTHER PTHR10668 1 87 2.1E-13 T 22-04-2016 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 PANTHER PTHR10668:SF4 1 87 2.1E-13 T 22-04-2016 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Gene3D G3DSA:3.50.50.60 232 261 5.6E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Gene3D G3DSA:3.50.50.60 363 398 5.6E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS07800 d572e33759b9eee23b16a7cc4fe95d6d 399 Pfam PF13450 NAD(P)-binding Rossmann-like domain 3 69 1.0E-12 T 22-04-2016 TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 29 311 2.4E-105 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 88 110 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 PANTHER PTHR11048 21 310 9.9E-120 T 22-04-2016 TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 24 313 27.25 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 PANTHER PTHR11048:SF28 21 310 9.9E-120 T 22-04-2016 TMO_RS14230 6efd1a4c43460206afae03115e472bce 318 Pfam PF01040 UbiA prenyltransferase family 48 294 8.3E-54 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 Pfam PF13537 Glutamine amidotransferase domain 58 164 1.1E-17 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 Gene3D G3DSA:3.40.50.620 222 391 2.5E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 Gene3D G3DSA:3.40.50.620 456 630 2.5E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772:SF10 60 367 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772:SF10 408 426 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772:SF10 477 650 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 Gene3D G3DSA:3.60.20.10 40 221 6.6E-32 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 Pfam PF00733 Asparagine synthase 240 623 1.8E-23 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 SUPERFAMILY SSF52402 508 615 5.23E-25 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 SUPERFAMILY SSF52402 218 388 5.23E-25 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772 60 367 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772 408 426 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 PANTHER PTHR11772 477 650 1.6E-20 T 22-04-2016 TMO_RS12160 fecca24f5179ad36c52425cb39c2cc87 650 SUPERFAMILY SSF56235 35 221 9.65E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PANTHER PTHR24322:SF513 166 198 1.1E-37 T 22-04-2016 TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PANTHER PTHR24322:SF513 25 150 1.1E-37 T 22-04-2016 TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 Pfam PF00106 short chain dehydrogenase 23 205 3.2E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 SUPERFAMILY SSF51735 17 261 7.87E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 4.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 4.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.3E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PANTHER PTHR24322 166 198 1.1E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 PANTHER PTHR24322 25 150 1.1E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR TMO_RS13415 3d4797ca1d8a967d0138a7841966da9b 266 Gene3D G3DSA:3.40.50.720 20 233 1.7E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS15540 01c1389670b5dae6aae5533ae3014120 150 PANTHER PTHR30009 16 132 1.7E-25 T 22-04-2016 TMO_RS15540 01c1389670b5dae6aae5533ae3014120 150 PANTHER PTHR30009:SF7 16 132 1.7E-25 T 22-04-2016 TMO_RS15540 01c1389670b5dae6aae5533ae3014120 150 Pfam PF03918 Cytochrome C biogenesis protein 13 149 2.6E-48 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family TMO_RS15630 1930d00ec1db531543c4bedebf619355 196 Gene3D G3DSA:3.90.1140.10 15 160 4.3E-9 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase TMO_RS15630 1930d00ec1db531543c4bedebf619355 196 SUPERFAMILY SSF55144 14 162 9.68E-12 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase TMO_RS15630 1930d00ec1db531543c4bedebf619355 196 Pfam PF13563 2'-5' RNA ligase superfamily 15 162 5.1E-16 T 22-04-2016 TMO_RS12430 0a6e2ba3f2f2ef83fee79421dd865864 200 Gene3D G3DSA:3.40.630.30 14 172 2.6E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS12430 0a6e2ba3f2f2ef83fee79421dd865864 200 SUPERFAMILY SSF55729 16 172 1.87E-10 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 Gene3D G3DSA:2.60.370.10 60 182 4.1E-53 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 PIRSF PIRSF005413 1 184 8.3E-62 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 PANTHER PTHR21320:SF3 1 179 6.2E-61 T 22-04-2016 TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 183 36.089 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 36 179 4.5E-55 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 PANTHER PTHR21320 1 179 6.2E-61 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 TMO_RS14165 8213e4b1ffa3fd344fd830252e10de56 184 SUPERFAMILY SSF110111 60 182 3.92E-50 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 Gene3D G3DSA:3.30.420.100 22 119 3.7E-40 T 22-04-2016 TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 SUPERFAMILY SSF53137 8 117 2.18E-52 T 22-04-2016 TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 1.7E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 1.5E-41 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 PANTHER PTHR12899 8 119 1.7E-41 T 22-04-2016 TMO_RS13175 55e5357fd65af9fd189194c7a5aace77 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 119 28.725 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 TMO_RS29180 9a2c96d2601ff4d21d06c3ba8d6e5360 236 SUPERFAMILY SSF56925 39 236 1.7E-27 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 TMO_RS29180 9a2c96d2601ff4d21d06c3ba8d6e5360 236 Pfam PF13505 Outer membrane protein beta-barrel domain 8 236 3.0E-17 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel TMO_RS29180 9a2c96d2601ff4d21d06c3ba8d6e5360 236 Gene3D G3DSA:2.40.160.20 39 236 9.1E-33 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 TMO_RS11990 e94ed60582fbae485bf44c142911f25f 475 Pfam PF06074 Protein of unknown function (DUF935) 31 463 2.4E-74 T 22-04-2016 IPR009279 Protein of unknown function DUF935 TMO_RS05535 e7e956665521feb99687d6a32cac293b 187 Pfam PF03748 Flagellar basal body-associated protein FliL 90 187 4.2E-19 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 TMO_RS05535 e7e956665521feb99687d6a32cac293b 187 PANTHER PTHR35091 3 58 4.5E-28 T 22-04-2016 TMO_RS05535 e7e956665521feb99687d6a32cac293b 187 PANTHER PTHR35091 76 187 4.5E-28 T 22-04-2016 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 SUPERFAMILY SSF46689 7 67 2.41E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 6.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 Gene3D G3DSA:1.10.357.10 106 186 8.5E-6 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 Gene3D G3DSA:1.10.10.60 7 64 2.4E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 PANTHER PTHR30055 1 61 2.9E-12 T 22-04-2016 TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 SUPERFAMILY SSF48498 127 188 7.78E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS29305 b1585f668ea51b76d2867f825344e443 222 PANTHER PTHR30055:SF27 1 61 2.9E-12 T 22-04-2016 TMO_RS17560 970efee5928c78687d0dacf7c79e5156 277 PANTHER PTHR30193 11 277 1.5E-37 T 22-04-2016 TMO_RS17560 970efee5928c78687d0dacf7c79e5156 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 267 1.8E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17560 970efee5928c78687d0dacf7c79e5156 277 SUPERFAMILY SSF161098 8 276 2.35E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS17560 970efee5928c78687d0dacf7c79e5156 277 Gene3D G3DSA:1.10.3720.10 15 271 4.0E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 273 5.6E-46 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 PANTHER PTHR11941:SF95 94 271 2.1E-86 T 22-04-2016 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 PANTHER PTHR11941:SF95 1 78 2.1E-86 T 22-04-2016 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 PANTHER PTHR11941 94 271 2.1E-86 T 22-04-2016 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 PANTHER PTHR11941 1 78 2.1E-86 T 22-04-2016 TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 Gene3D G3DSA:3.90.226.10 10 272 4.1E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12745 6030e0197f6d0828d7cc196d1fc5a3b4 274 SUPERFAMILY SSF52096 11 274 1.14E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS20440 34905f02266705b4d6ca3a715e0df099 179 PANTHER PTHR36445:SF1 7 176 1.3E-28 T 22-04-2016 TMO_RS20440 34905f02266705b4d6ca3a715e0df099 179 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 173 1.2E-29 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS20440 34905f02266705b4d6ca3a715e0df099 179 Gene3D G3DSA:3.10.270.10 4 127 8.5E-32 T 22-04-2016 TMO_RS20440 34905f02266705b4d6ca3a715e0df099 179 Gene3D G3DSA:3.10.270.10 159 173 8.5E-32 T 22-04-2016 TMO_RS20440 34905f02266705b4d6ca3a715e0df099 179 PANTHER PTHR36445 7 176 1.3E-28 T 22-04-2016 TMO_RS07790 fcc721b438d92ba7a77b316801014e46 126 SUPERFAMILY SSF64076 1 125 7.85E-33 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein TMO_RS07790 fcc721b438d92ba7a77b316801014e46 126 PANTHER PTHR21192:SF3 17 125 9.6E-25 T 22-04-2016 TMO_RS07790 fcc721b438d92ba7a77b316801014e46 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 124 3.9E-27 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein TMO_RS07790 fcc721b438d92ba7a77b316801014e46 126 Gene3D G3DSA:3.40.1230.10 1 125 1.4E-33 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein TMO_RS07790 fcc721b438d92ba7a77b316801014e46 126 PANTHER PTHR21192 17 125 9.6E-25 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein TMO_RS08295 670cd4cc83e6a56369f00e1d68a2d772 96 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 40 92 2.3E-11 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter TMO_RS08295 670cd4cc83e6a56369f00e1d68a2d772 96 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 7 95 6.0E-15 T 22-04-2016 IPR011744 F0F1-ATPase subunit, putative TMO_RS13065 146073b6117545f41faea40192c176e3 182 PIRSF PIRSF016661 1 178 3.9E-43 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_RS13065 146073b6117545f41faea40192c176e3 182 PANTHER PTHR34295:SF2 1 170 3.1E-51 T 22-04-2016 TMO_RS13065 146073b6117545f41faea40192c176e3 182 PANTHER PTHR34295 1 170 3.1E-51 T 22-04-2016 TMO_RS13065 146073b6117545f41faea40192c176e3 182 Pfam PF02632 BioY family 30 170 5.6E-35 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 TMO_RS15345 b7158b5d0447ee0237a419d797f113e9 308 Pfam PF13391 HNH endonuclease 203 256 3.6E-8 T 22-04-2016 IPR003615 HNH nuclease TMO_RS14705 29cf1ca4daeb75e88490ff0bbb743ea5 345 PANTHER PTHR10907 56 320 7.1E-12 T 22-04-2016 TMO_RS14705 29cf1ca4daeb75e88490ff0bbb743ea5 345 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 68 294 2.3E-30 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region TMO_RS14705 29cf1ca4daeb75e88490ff0bbb743ea5 345 Gene3D G3DSA:2.120.10.30 57 320 3.4E-47 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like TMO_RS14705 29cf1ca4daeb75e88490ff0bbb743ea5 345 SUPERFAMILY SSF63829 39 322 3.14E-55 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 Gene3D G3DSA:3.40.50.2300 151 262 4.6E-7 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 PANTHER PTHR30483:SF7 35 390 3.6E-24 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 Gene3D G3DSA:3.40.50.2300 283 341 1.3E-20 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 Gene3D G3DSA:3.40.50.2300 33 150 1.3E-20 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 PANTHER PTHR30483 35 390 3.6E-24 T 22-04-2016 TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 SUPERFAMILY SSF53822 35 355 2.36E-56 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS17465 a72f73671e2ce68804ab72774d814e32 431 Pfam PF13458 Periplasmic binding protein 34 356 1.5E-33 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS04350 248e2d3b72823f903f9d9158c5c5e415 362 PANTHER PTHR32196:SF30 12 359 2.3E-74 T 22-04-2016 TMO_RS04350 248e2d3b72823f903f9d9158c5c5e415 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 329 2.1E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS04350 248e2d3b72823f903f9d9158c5c5e415 362 PANTHER PTHR32196 12 359 2.3E-74 T 22-04-2016 TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 58 259 1.2E-52 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 SUPERFAMILY SSF52096 45 161 9.56E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 SUPERFAMILY SSF52096 190 250 9.56E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Pfam PF01343 Peptidase family S49 114 264 2.3E-37 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Gene3D G3DSA:3.90.226.10 40 153 1.4E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 Gene3D G3DSA:3.90.226.10 191 267 1.4E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS16285 d7be0c5aa1d7f64098ec57fafcfbea5c 318 PANTHER PTHR33209 57 298 4.4E-57 T 22-04-2016 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PIRSF PIRSF006648 3 259 1.1E-23 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 5.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 5.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 5.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PANTHER PTHR30413 11 261 1.4E-63 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 Pfam PF01061 ABC-2 type transporter 15 223 1.6E-32 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 TMO_RS02060 c69f5080a54a48ef569f63a6430900d3 262 PANTHER PTHR30413:SF2 11 261 1.4E-63 T 22-04-2016 TMO_RS12535 81c88419f75bf3dc1e48bc46a463f85c 307 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 28 244 3.2E-48 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN TMO_RS12535 81c88419f75bf3dc1e48bc46a463f85c 307 SUPERFAMILY SSF159501 23 284 7.32E-52 T 22-04-2016 TMO_RS06420 5e9de6ccb80e2ad1af7243ef973c8648 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 417 3.7E-89 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit TMO_RS06420 5e9de6ccb80e2ad1af7243ef973c8648 428 PANTHER PTHR33362 4 428 1.6E-116 T 22-04-2016 TMO_RS06420 5e9de6ccb80e2ad1af7243ef973c8648 428 PIRSF PIRSF006066 2 428 2.2E-94 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS06420 5e9de6ccb80e2ad1af7243ef973c8648 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 4.9E-99 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 TMO_RS06420 5e9de6ccb80e2ad1af7243ef973c8648 428 PANTHER PTHR33362:SF5 4 428 1.6E-116 T 22-04-2016 TMO_RS05850 5a4820a9191ffa9811c1ba477feaa82c 292 SUPERFAMILY SSF51735 3 260 9.39E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05850 5a4820a9191ffa9811c1ba477feaa82c 292 Gene3D G3DSA:3.40.50.720 1 223 3.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05850 5a4820a9191ffa9811c1ba477feaa82c 292 PANTHER PTHR14194 1 287 7.2E-81 T 22-04-2016 TMO_RS05850 5a4820a9191ffa9811c1ba477feaa82c 292 Pfam PF13460 NAD(P)H-binding 8 188 4.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS05850 5a4820a9191ffa9811c1ba477feaa82c 292 PANTHER PTHR14194:SF73 1 287 7.2E-81 T 22-04-2016 TMO_RS02985 c2b9bf3a36f93bce6ac99d55be070133 120 PANTHER PTHR33473 27 120 3.1E-38 T 22-04-2016 TMO_RS02985 c2b9bf3a36f93bce6ac99d55be070133 120 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 26 115 28.877 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS TMO_RS02985 c2b9bf3a36f93bce6ac99d55be070133 120 SUPERFAMILY SSF54736 36 119 5.02E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_RS02985 c2b9bf3a36f93bce6ac99d55be070133 120 Gene3D G3DSA:3.30.1390.10 25 120 7.2E-45 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like TMO_RS02985 c2b9bf3a36f93bce6ac99d55be070133 120 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 38 116 9.2E-36 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 TMO_RS08375 7b6c1df5ab42047cec1bcf1f8892650d 118 Pfam PF06993 Protein of unknown function (DUF1304) 8 115 2.5E-43 T 22-04-2016 IPR009732 Protein of unknown function DUF1304 TMO_RS08375 7b6c1df5ab42047cec1bcf1f8892650d 118 PANTHER PTHR38446:SF1 1 117 4.2E-33 T 22-04-2016 TMO_RS08375 7b6c1df5ab42047cec1bcf1f8892650d 118 PANTHER PTHR38446 1 117 4.2E-33 T 22-04-2016 TMO_RS12190 f582e3c93b168181c32eddd98eddbf4f 110 Gene3D G3DSA:3.30.70.900 1 100 3.5E-15 T 22-04-2016 TMO_RS12190 f582e3c93b168181c32eddd98eddbf4f 110 PANTHER PTHR37811:SF2 1 108 1.0E-33 T 22-04-2016 TMO_RS12190 f582e3c93b168181c32eddd98eddbf4f 110 SUPERFAMILY SSF54909 1 100 1.48E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS12190 f582e3c93b168181c32eddd98eddbf4f 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 5.8E-8 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_RS12190 f582e3c93b168181c32eddd98eddbf4f 110 PANTHER PTHR37811 1 108 1.0E-33 T 22-04-2016 TMO_RS17215 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 PANTHER PTHR13696:SF52 13 270 8.4E-93 T 22-04-2016 TMO_RS17215 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 Pfam PF13614 AAA domain 18 194 2.5E-60 T 22-04-2016 IPR025669 AAA domain TMO_RS17215 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 Gene3D G3DSA:3.40.50.300 19 271 1.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17215 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 PANTHER PTHR13696 13 270 8.4E-93 T 22-04-2016 TMO_RS17215 a9a3de8e61d3c222cb0e907e2cf3e0cb 274 SUPERFAMILY SSF52540 18 269 4.99E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 91 6.9E-27 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 6.9E-27 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 91 111 6.9E-27 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 9 33 6.9E-27 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PANTHER PTHR30386:SF3 1 112 2.3E-24 T 22-04-2016 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 PANTHER PTHR30386 1 112 2.3E-24 T 22-04-2016 TMO_RS29085 7aa26c11ca5edca30e8576ecad79d906 112 Pfam PF00529 HlyD membrane-fusion protein of T1SS 9 68 1.8E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 TMO_RS03935 72cd33c9f98bd4d25026b1246bdc9786 167 Pfam PF11776 Nickel/cobalt transporter regulator 124 160 1.9E-7 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 PANTHER PTHR11995 5 182 1.7E-126 T 22-04-2016 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 Gene3D G3DSA:3.40.50.700 51 178 2.8E-33 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 147 163 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 66 174 2.9E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 29 180 41.739 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 SUPERFAMILY SSF56770 38 182 1.57E-66 T 22-04-2016 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 40 181 2.4E-76 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 TMO_RS09940 f93f802061ed5c1e12b0f902330041cf 187 PANTHER PTHR11995:SF19 5 182 1.7E-126 T 22-04-2016 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 PANTHER PTHR23083 73 167 1.1E-12 T 22-04-2016 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 PANTHER PTHR23083 25 56 1.1E-12 T 22-04-2016 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 SMART SM00028 94 127 4.3E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 SMART SM00028 128 161 0.28 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 Gene3D G3DSA:1.25.40.10 53 167 5.4E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 SUPERFAMILY SSF48452 52 169 3.52E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS02285 9fbf81d28c8e5ce265366748f8e1cb90 180 Pfam PF13432 Tetratricopeptide repeat 64 125 5.8E-6 T 22-04-2016 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 Gene3D G3DSA:3.10.20.30 2 73 9.2E-30 T 22-04-2016 IPR012675 Beta-grasp domain TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 Gene3D G3DSA:1.10.150.120 74 149 8.0E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 SUPERFAMILY SSF47741 72 148 1.44E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 60 7.4E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 Pfam PF01799 [2Fe-2S] binding domain 72 143 9.6E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 PANTHER PTHR11908:SF82 1 149 2.8E-32 T 22-04-2016 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 SUPERFAMILY SSF54292 3 77 1.84E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 TMO_RS02420 2fff6bdd197f2ddde0f833060e30f221 150 PANTHER PTHR11908 1 149 2.8E-32 T 22-04-2016 TMO_RS12390 599876466fb7302d59c64010636b161b 95 SUPERFAMILY SSF143120 1 43 8.37E-10 T 22-04-2016 TMO_RS12390 599876466fb7302d59c64010636b161b 95 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 42 9.4E-9 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS12390 599876466fb7302d59c64010636b161b 95 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 7.4E-10 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS12390 599876466fb7302d59c64010636b161b 95 Gene3D G3DSA:3.40.1620.10 1 43 9.3E-12 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM TMO_RS01675 8ea46e8096ffffa249eed4a94c0c12fc 404 PANTHER PTHR30483:SF6 1 342 7.3E-57 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 TMO_RS01675 8ea46e8096ffffa249eed4a94c0c12fc 404 SUPERFAMILY SSF53822 28 400 6.02E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS01675 8ea46e8096ffffa249eed4a94c0c12fc 404 Gene3D G3DSA:3.40.50.2300 28 226 5.2E-55 T 22-04-2016 TMO_RS01675 8ea46e8096ffffa249eed4a94c0c12fc 404 Pfam PF13458 Periplasmic binding protein 29 347 6.0E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain TMO_RS01675 8ea46e8096ffffa249eed4a94c0c12fc 404 PANTHER PTHR30483 1 342 7.3E-57 T 22-04-2016 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 SUPERFAMILY SSF111331 12 307 8.94E-73 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 SMART SM00046 14 142 4.0E-4 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 PANTHER PTHR12358:SF43 75 317 1.1E-53 T 22-04-2016 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 PANTHER PTHR12358:SF43 34 47 1.1E-53 T 22-04-2016 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 PANTHER PTHR12358 75 317 1.1E-53 T 22-04-2016 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 PANTHER PTHR12358 34 47 1.1E-53 T 22-04-2016 TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 73 306 1.1E-43 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase TMO_RS29685 afcdd48e6efd98095dd0b9e68eba8af3 501 Pfam PF00781 Diacylglycerol kinase catalytic domain 32 139 8.7E-20 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 TMO_RS28980 4cf4ccb64baf1cb94d514935251a92e1 258 SMART SM00271 202 256 3.4E-4 T 22-04-2016 IPR001623 DnaJ domain TMO_RS28980 4cf4ccb64baf1cb94d514935251a92e1 258 SUPERFAMILY SSF46565 197 256 1.01E-12 T 22-04-2016 IPR001623 DnaJ domain TMO_RS28980 4cf4ccb64baf1cb94d514935251a92e1 258 Gene3D G3DSA:1.10.287.110 197 257 1.6E-12 T 22-04-2016 IPR001623 DnaJ domain TMO_RS00980 aa76dae46f1318c3cad0f4f3d7bb3475 321 Gene3D G3DSA:3.40.50.720 32 311 1.1E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00980 aa76dae46f1318c3cad0f4f3d7bb3475 321 PANTHER PTHR10366 26 313 5.1E-65 T 22-04-2016 TMO_RS00980 aa76dae46f1318c3cad0f4f3d7bb3475 321 SUPERFAMILY SSF51735 33 315 5.72E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS00980 aa76dae46f1318c3cad0f4f3d7bb3475 321 PANTHER PTHR10366:SF430 26 313 5.1E-65 T 22-04-2016 TMO_RS00575 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 Pfam PF01883 Domain of unknown function DUF59 17 91 1.4E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 TMO_RS00575 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 PANTHER PTHR13696 15 111 4.5E-23 T 22-04-2016 TMO_RS00575 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 PANTHER PTHR13696:SF62 15 111 4.5E-23 T 22-04-2016 TMO_RS00575 1e2b966fdc9d7e06d3be8d4d20d92a4d 113 SUPERFAMILY SSF117916 17 111 2.84E-32 T 22-04-2016 TMO_RS07065 f13a5e4ea07d9e25a07e207655cc9844 190 PANTHER PTHR35011 7 170 5.3E-23 T 22-04-2016 TMO_RS07065 f13a5e4ea07d9e25a07e207655cc9844 190 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 46 176 4.0E-30 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 Gene3D G3DSA:3.90.950.10 1 188 2.9E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 28.795 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 Pfam PF02545 Maf-like protein 1 184 9.4E-50 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 183 9.0E-41 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 PIRSF PIRSF006305 1 192 3.9E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 TMO_RS05065 bd52743f6341a87b03f803c59a3dc821 204 SUPERFAMILY SSF52972 1 183 3.92E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 PANTHER PTHR24220:SF568 3 233 3.8E-135 T 22-04-2016 TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 PIRSF PIRSF039137 1 235 4.3E-107 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 Pfam PF00005 ABC transporter 17 161 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 SMART SM00382 26 236 4.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 PANTHER PTHR24220 3 233 3.8E-135 T 22-04-2016 TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 SUPERFAMILY SSF52540 2 232 8.99E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 TMO_RS10300 46aea3fe04438ca6f4359cf669ce7eba 236 Gene3D G3DSA:3.40.50.300 1 231 5.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS15555 6b4a03e6fa2b23c9007b6873cf469901 173 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site TMO_RS15555 6b4a03e6fa2b23c9007b6873cf469901 173 SMART SM00347 30 131 4.5E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 TMO_RS15555 6b4a03e6fa2b23c9007b6873cf469901 173 SUPERFAMILY SSF46785 14 142 5.24E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15555 6b4a03e6fa2b23c9007b6873cf469901 173 Gene3D G3DSA:1.10.10.10 11 142 1.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS15555 6b4a03e6fa2b23c9007b6873cf469901 173 Pfam PF12802 MarR family 36 94 8.4E-11 T 22-04-2016 TMO_RS05885 263e97ed664c8f6ad79320edc69dc0c0 285 PANTHER PTHR10108 28 160 1.1E-26 T 22-04-2016 TMO_RS05885 263e97ed664c8f6ad79320edc69dc0c0 285 SUPERFAMILY SSF53335 16 237 6.04E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05885 263e97ed664c8f6ad79320edc69dc0c0 285 Gene3D G3DSA:3.40.50.150 17 258 4.8E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05885 263e97ed664c8f6ad79320edc69dc0c0 285 Pfam PF13649 Methyltransferase domain 55 152 5.2E-17 T 22-04-2016 TMO_RS05885 263e97ed664c8f6ad79320edc69dc0c0 285 PANTHER PTHR10108:SF889 28 160 1.1E-26 T 22-04-2016 TMO_RS16005 659c18b33afc410677f89a5fe784719d 402 Pfam PF00155 Aminotransferase class I and II 50 392 1.9E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 TMO_RS16005 659c18b33afc410677f89a5fe784719d 402 SUPERFAMILY SSF53383 19 396 1.71E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase TMO_RS16005 659c18b33afc410677f89a5fe784719d 402 Gene3D G3DSA:3.40.640.10 55 266 2.2E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 TMO_RS16005 659c18b33afc410677f89a5fe784719d 402 PANTHER PTHR11751 26 395 8.8E-101 T 22-04-2016 TMO_RS16005 659c18b33afc410677f89a5fe784719d 402 Gene3D G3DSA:3.90.1150.10 267 396 2.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 TMO_RS15910 6c92230fe776a19225dbf534dc6925e5 335 PANTHER PTHR42110 1 329 4.4E-69 T 22-04-2016 TMO_RS15910 6c92230fe776a19225dbf534dc6925e5 335 PANTHER PTHR42110:SF1 1 329 4.4E-69 T 22-04-2016 TMO_RS15910 6c92230fe776a19225dbf534dc6925e5 335 Pfam PF06089 L-asparaginase II 8 330 5.4E-112 T 22-04-2016 IPR010349 L-asparaginase II TMO_RS13405 a837618efc113a5eab594eba4f8daf2b 255 PANTHER PTHR33973 12 250 1.3E-40 T 22-04-2016 TMO_RS13405 a837618efc113a5eab594eba4f8daf2b 255 Pfam PF07103 Protein of unknown function (DUF1365) 9 247 1.1E-63 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 TMO_RS07350 1a3eee38f3cb2d8066286e3826fc902a 407 Pfam PF06792 Uncharacterised protein family (UPF0261) 9 404 1.5E-153 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 TMO_RS07350 1a3eee38f3cb2d8066286e3826fc902a 407 PIRSF PIRSF033271 7 407 8.7E-166 T 22-04-2016 IPR008322 Uncharacterised protein family UPF0261 TMO_RS07350 1a3eee38f3cb2d8066286e3826fc902a 407 PANTHER PTHR31862 2 407 1.2E-188 T 22-04-2016 TMO_RS10845 68b84670eb61c15380f5975a4d27b8a6 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 8 396 4.6E-112 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_RS10845 68b84670eb61c15380f5975a4d27b8a6 399 PANTHER PTHR36178 1 394 2.8E-107 T 22-04-2016 TMO_RS10845 68b84670eb61c15380f5975a4d27b8a6 399 PANTHER PTHR36178:SF1 1 394 2.8E-107 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_RS10845 68b84670eb61c15380f5975a4d27b8a6 399 Pfam PF03616 Sodium/glutamate symporter 4 370 1.8E-98 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 TMO_RS17610 eceb98577700fa65693bdafd3dfdb034 849 PANTHER PTHR34697 1 840 6.6E-229 T 22-04-2016 TMO_RS17610 eceb98577700fa65693bdafd3dfdb034 849 SUPERFAMILY SSF55729 639 819 1.3E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS17610 eceb98577700fa65693bdafd3dfdb034 849 PANTHER PTHR34697:SF2 1 840 6.6E-229 T 22-04-2016 TMO_RS17610 eceb98577700fa65693bdafd3dfdb034 849 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 16 293 2.1E-7 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TMO_RS17610 eceb98577700fa65693bdafd3dfdb034 849 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 533 821 5.0E-93 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal TMO_RS06425 cfacf30973ce4c4e3453dad4d22d86e4 226 Pfam PF11010 Protein of unknown function (DUF2848) 23 217 1.2E-79 T 22-04-2016 IPR021269 Protein of unknown function DUF2848 TMO_RS06425 cfacf30973ce4c4e3453dad4d22d86e4 226 SUPERFAMILY SSF56529 35 209 3.82E-9 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS06845 c840c40d1c671818e0bfdb2f54d06549 244 Pfam PF04402 Protein of unknown function (DUF541) 39 232 8.2E-20 T 22-04-2016 IPR007497 Protein of unknown function DUF541 TMO_RS06845 c840c40d1c671818e0bfdb2f54d06549 244 PIRSF PIRSF029033 4 244 4.4E-61 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein TMO_RS23445 de64051147c2d8fcf03b27f45f38bf9e 324 Gene3D G3DSA:3.40.50.970 52 254 6.7E-6 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS23445 de64051147c2d8fcf03b27f45f38bf9e 324 SUPERFAMILY SSF52518 54 238 5.65E-15 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold TMO_RS04495 e3368f694ce171769c1be739790dc4e4 268 SUPERFAMILY SSF47413 5 64 3.94E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04495 e3368f694ce171769c1be739790dc4e4 268 Gene3D G3DSA:1.10.260.40 3 62 1.8E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS04495 e3368f694ce171769c1be739790dc4e4 268 Pfam PF01381 Helix-turn-helix 18 60 2.0E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS04495 e3368f694ce171769c1be739790dc4e4 268 SMART SM00530 7 61 4.2E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 TMO_RS05210 09a06a72367018d782259370c22dec89 412 Gene3D G3DSA:1.20.1250.20 228 397 1.3E-8 T 22-04-2016 TMO_RS05210 09a06a72367018d782259370c22dec89 412 Gene3D G3DSA:1.20.1250.20 22 195 5.5E-7 T 22-04-2016 TMO_RS05210 09a06a72367018d782259370c22dec89 412 SUPERFAMILY SSF103473 23 401 6.28E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS08410 5f65e4d9567496eb55a7ed0ab17bc5ba 69 Pfam PF00872 Transposase, Mutator family 1 40 9.8E-13 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 TMO_RS07945 8f26030389846ab1bf2bf076427fcb83 210 Pfam PF10263 SprT-like family 68 189 2.2E-19 T 22-04-2016 IPR006640 SprT-like TMO_RS07945 8f26030389846ab1bf2bf076427fcb83 210 SMART SM00731 59 198 9.6E-4 T 22-04-2016 IPR006640 SprT-like TMO_RS15490 25ce78fc60336a5d4db6432201be8302 340 Gene3D G3DSA:3.40.190.10 158 208 7.5E-4 T 22-04-2016 TMO_RS15490 25ce78fc60336a5d4db6432201be8302 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 317 4.1E-39 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS15490 25ce78fc60336a5d4db6432201be8302 340 PANTHER PTHR33376 5 338 1.2E-50 T 22-04-2016 TMO_RS11175 b1b4e07a4e6bf9240061d519a9ea235b 144 Pfam PF02586 SOS response associated peptidase (SRAP) 9 133 1.2E-13 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS11175 b1b4e07a4e6bf9240061d519a9ea235b 144 SUPERFAMILY SSF143081 2 140 1.57E-30 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS11175 b1b4e07a4e6bf9240061d519a9ea235b 144 Gene3D G3DSA:3.90.1680.10 2 139 3.2E-21 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 PANTHER PTHR30055 10 194 7.1E-49 T 22-04-2016 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.9E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.7E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 Gene3D G3DSA:1.10.357.10 4 198 3.1E-37 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 SUPERFAMILY SSF48498 82 195 6.85E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 SUPERFAMILY SSF46689 3 83 9.22E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS06950 6c28166f3ca80a7c3fdecc758be90899 202 PANTHER PTHR30055:SF60 10 194 7.1E-49 T 22-04-2016 TMO_RS15800 97c49a08b1471951ef8dafedf8453b3d 132 PANTHER PTHR35303 8 132 7.6E-42 T 22-04-2016 TMO_RS15800 97c49a08b1471951ef8dafedf8453b3d 132 Pfam PF06155 Protein of unknown function (DUF971) 23 106 5.2E-28 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 TMO_RS13570 462b32cccbe3cfc4c5cd1d8f820adb77 178 Pfam PF14091 Domain of unknown function (DUF4269) 11 158 1.7E-46 T 22-04-2016 IPR025365 Protein of unknown function DUF4269 TMO_RS10605 2d4722f4dfdd101df983129d447efab4 104 PANTHER PTHR33755:SF3 1 91 6.9E-16 T 22-04-2016 TMO_RS10605 2d4722f4dfdd101df983129d447efab4 104 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 92 4.3E-16 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family TMO_RS10605 2d4722f4dfdd101df983129d447efab4 104 PANTHER PTHR33755 1 91 6.9E-16 T 22-04-2016 TMO_RS15730 a0233166fbdda96f1b1089d9b99c12a6 142 Pfam PF09722 Protein of unknown function (DUF2384) 88 139 1.4E-12 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 TMO_RS15730 a0233166fbdda96f1b1089d9b99c12a6 142 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 21 142 9.7E-42 T 22-04-2016 IPR011979 Conserved hypothetical protein CHP02293 TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 Gene3D G3DSA:3.40.50.2300 143 337 4.2E-73 T 22-04-2016 TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 PANTHER PTHR30483 1 411 4.7E-201 T 22-04-2016 TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 SUPERFAMILY SSF53822 27 400 1.38E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 28 395 3.4E-176 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 PANTHER PTHR30483:SF8 1 411 4.7E-201 T 22-04-2016 TMO_RS08655 890e7661c45e01bc83e3635f1a142f1c 423 Pfam PF13433 Periplasmic binding protein domain 28 399 4.1E-174 T 22-04-2016 TMO_RS00455 667dc18d90089a550c6666ee1ad37c00 390 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 105 333 1.2E-25 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 TMO_RS00455 667dc18d90089a550c6666ee1ad37c00 390 PANTHER PTHR37539 51 368 5.3E-14 T 22-04-2016 TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 Gene3D G3DSA:1.20.1050.10 109 205 2.4E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 Gene3D G3DSA:3.40.30.10 7 15 9.3E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 Gene3D G3DSA:3.40.30.10 67 108 9.3E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 Pfam PF13410 Glutathione S-transferase, C-terminal domain 139 196 9.9E-7 T 22-04-2016 TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 SUPERFAMILY SSF47616 95 216 4.97E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS10680 1414ab67fd55cd5ec790ed668a6970c4 233 PANTHER PTHR11260 63 207 7.1E-15 T 22-04-2016 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 34 395 3.7E-97 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 Gene3D G3DSA:1.10.3210.10 296 396 2.2E-76 T 22-04-2016 IPR006674 HD domain TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 Gene3D G3DSA:1.10.3210.10 34 239 2.2E-76 T 22-04-2016 IPR006674 HD domain TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 SMART SM00471 67 226 9.0E-14 T 22-04-2016 IPR003607 HD/PDEase domain TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 Pfam PF13286 Phosphohydrolase-associated domain 303 393 1.2E-24 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 PANTHER PTHR11373 13 168 8.2E-81 T 22-04-2016 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 Pfam PF01966 HD domain 71 215 1.2E-16 T 22-04-2016 IPR006674 HD domain TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 13 395 38.032 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 PANTHER PTHR11373:SF25 13 168 8.2E-81 T 22-04-2016 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 SUPERFAMILY SSF109604 197 398 1.75E-85 T 22-04-2016 TMO_RS07580 82d478b1653afb144106ee4c4164fc02 401 SUPERFAMILY SSF109604 22 167 1.75E-85 T 22-04-2016 TMO_RS02065 3167ec91f6effce4de6087301ad32dd5 148 Pfam PF08448 PAS fold 60 145 8.7E-7 T 22-04-2016 IPR013656 PAS fold-4 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 Gene3D G3DSA:3.40.50.1820 32 311 2.8E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 PANTHER PTHR10992 34 315 5.7E-37 T 22-04-2016 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 131 144 6.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 145 158 6.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 100 6.2E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 Pfam PF12697 Alpha/beta hydrolase family 61 305 3.7E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS01290 e8469e31197e7aade07ceaa1cfbf1964 316 SUPERFAMILY SSF53474 31 311 2.9E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS10600 154e4226acbf9e1076836f75ce756d28 80 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 1 60 4.6E-16 T 22-04-2016 IPR022789 Antitoxin ParD TMO_RS10600 154e4226acbf9e1076836f75ce756d28 80 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 4 71 8.9E-8 T 22-04-2016 IPR022789 Antitoxin ParD TMO_RS10600 154e4226acbf9e1076836f75ce756d28 80 SUPERFAMILY SSF47598 3 41 2.89E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 TMO_RS14590 cb72ef7390ea71d3691ca225dd85bb47 96 Pfam PF03956 Membrane protein of unknown function (DUF340) 6 89 2.5E-6 T 22-04-2016 IPR005642 Lysine exporter LysO TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 192 1.3E-9 T 22-04-2016 TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 Gene3D G3DSA:1.20.1050.10 101 205 2.1E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 PANTHER PTHR11260 6 203 5.3E-48 T 22-04-2016 TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 Gene3D G3DSA:3.40.30.10 3 100 6.2E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 SUPERFAMILY SSF47616 81 205 2.78E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 SUPERFAMILY SSF52833 5 108 1.82E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS12545 8a23318c2ae5348b4d1435361ae06b62 224 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 83 4.1E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 TMO_RS29000 4b3b68210cb5c1bfae01fc9128079519 281 Pfam PF13578 Methyltransferase domain 53 170 2.5E-10 T 22-04-2016 TMO_RS29000 4b3b68210cb5c1bfae01fc9128079519 281 SUPERFAMILY SSF53335 49 187 1.37E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 Pfam PF07859 alpha/beta hydrolase fold 87 295 2.1E-71 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 PANTHER PTHR23024:SF207 64 320 3.9E-85 T 22-04-2016 TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 SUPERFAMILY SSF53474 11 317 8.53E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 PANTHER PTHR23024 64 320 3.9E-85 T 22-04-2016 TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 Gene3D G3DSA:3.40.50.1820 9 317 6.0E-90 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS07090 5b3813cd95514db02955af3c9df33ab1 326 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 Pfam PF00672 HAMP domain 167 221 2.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 SMART SM00304 172 225 4.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 SUPERFAMILY SSF158472 173 222 2.75E-7 T 22-04-2016 TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 SUPERFAMILY SSF55073 239 278 8.63E-6 T 22-04-2016 IPR029787 Nucleotide cyclase TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 Gene3D G3DSA:3.30.70.270 236 276 1.1E-7 T 22-04-2016 TMO_RS29020 8e66b40c1a76b41568d871d8035b064d 292 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 275 3.5E-6 T 22-04-2016 IPR000160 GGDEF domain TMO_RS04430 5e9d74ed2366adf6f756055a95a3a0ef 174 SUPERFAMILY SSF103088 63 157 1.24E-8 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04430 5e9d74ed2366adf6f756055a95a3a0ef 174 Pfam PF00691 OmpA family 80 162 1.4E-7 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS04430 5e9d74ed2366adf6f756055a95a3a0ef 174 Gene3D G3DSA:3.30.1330.60 65 158 5.3E-8 T 22-04-2016 IPR006665 OmpA-like domain TMO_RS07480 c3ca000393c842bc85cf7c7400e9f982 205 PANTHER PTHR30086:SF12 1 205 6.3E-55 T 22-04-2016 TMO_RS07480 c3ca000393c842bc85cf7c7400e9f982 205 PANTHER PTHR30086 1 205 6.3E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS07480 c3ca000393c842bc85cf7c7400e9f982 205 Pfam PF01810 LysE type translocator 15 197 3.3E-15 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS11525 cb9d1087f9b2903ba42a79383e71e0a8 313 SUPERFAMILY SSF53807 25 297 2.35E-55 T 22-04-2016 TMO_RS11525 cb9d1087f9b2903ba42a79383e71e0a8 313 Gene3D G3DSA:3.40.50.1980 167 298 2.7E-26 T 22-04-2016 TMO_RS11525 cb9d1087f9b2903ba42a79383e71e0a8 313 Pfam PF01497 Periplasmic binding protein 47 268 8.4E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS11525 cb9d1087f9b2903ba42a79383e71e0a8 313 PANTHER PTHR30535 3 296 1.2E-49 T 22-04-2016 TMO_RS11525 cb9d1087f9b2903ba42a79383e71e0a8 313 Gene3D G3DSA:3.40.50.1980 43 164 3.7E-25 T 22-04-2016 TMO_RS05485 1774fbe1dec453e14afabdce36d35963 173 SUPERFAMILY SSF140566 35 128 1.44E-6 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 TMO_RS05485 1774fbe1dec453e14afabdce36d35963 173 Gene3D G3DSA:1.20.58.300 29 128 4.6E-5 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 TMO_RS05485 1774fbe1dec453e14afabdce36d35963 173 Pfam PF05130 FlgN protein 28 130 7.0E-7 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 TMO_RS16570 0a5328921315f7962b4a4fb266474636 290 SUPERFAMILY SSF63829 52 252 1.11E-7 T 22-04-2016 TMO_RS13595 841b71228ef29e1f6287d48deb62ed5a 385 Pfam PF02646 RmuC family 102 375 2.8E-57 T 22-04-2016 IPR003798 DNA recombination RmuC TMO_RS13595 841b71228ef29e1f6287d48deb62ed5a 385 PANTHER PTHR30563 28 373 1.0E-68 T 22-04-2016 TMO_RS17675 1a7855a8cef946576735b524861fa616 208 PANTHER PTHR30086 1 207 1.7E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS17675 1a7855a8cef946576735b524861fa616 208 Pfam PF01810 LysE type translocator 16 203 3.1E-30 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS17675 1a7855a8cef946576735b524861fa616 208 PIRSF PIRSF006324 1 207 1.0E-53 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS17675 1a7855a8cef946576735b524861fa616 208 PANTHER PTHR30086:SF4 1 207 1.7E-54 T 22-04-2016 TMO_RS29550 bc141c5e042d8c396921361523f51fb3 342 PANTHER PTHR40277 15 338 4.8E-37 T 22-04-2016 TMO_RS29550 bc141c5e042d8c396921361523f51fb3 342 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 33 327 5.1E-39 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD TMO_RS05035 78e600a6755411e8172815a904d0d021 429 Gene3D G3DSA:3.65.10.10 21 228 6.6E-69 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 424 3.7E-171 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 415 2.2E-100 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 425 46.066 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 Gene3D G3DSA:3.65.10.10 229 424 1.5E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 PANTHER PTHR21090 1 425 1.8E-181 T 22-04-2016 TMO_RS05035 78e600a6755411e8172815a904d0d021 429 SUPERFAMILY SSF55205 1 425 3.27E-135 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 TMO_RS06055 698380e3e4390095553db75f0c4433f7 341 PANTHER PTHR33376 1 337 9.1E-45 T 22-04-2016 TMO_RS06055 698380e3e4390095553db75f0c4433f7 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 305 1.5E-36 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS14045 b55d48e0194f14c6ac3929426143ce50 793 PANTHER PTHR23517 388 793 7.8E-15 T 22-04-2016 TMO_RS14045 b55d48e0194f14c6ac3929426143ce50 793 Gene3D G3DSA:1.20.1250.20 603 783 1.6E-18 T 22-04-2016 TMO_RS14045 b55d48e0194f14c6ac3929426143ce50 793 Gene3D G3DSA:1.20.1250.20 388 563 1.1E-17 T 22-04-2016 TMO_RS14045 b55d48e0194f14c6ac3929426143ce50 793 SUPERFAMILY SSF103473 387 784 1.7E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS14045 b55d48e0194f14c6ac3929426143ce50 793 Pfam PF07690 Major Facilitator Superfamily 387 710 6.7E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS11250 9069c3051a036f077d6a2f526703a56e 155 Pfam PF03713 Domain of unknown function (DUF305) 97 152 5.4E-13 T 22-04-2016 IPR005183 Domain of unknown function DUF305 TMO_RS11250 9069c3051a036f077d6a2f526703a56e 155 Gene3D G3DSA:1.20.1260.10 102 154 3.4E-20 T 22-04-2016 IPR012347 Ferritin-related TMO_RS11250 9069c3051a036f077d6a2f526703a56e 155 Gene3D G3DSA:1.20.1260.10 34 70 3.4E-20 T 22-04-2016 IPR012347 Ferritin-related TMO_RS12270 6f1705d50d784d14a19c2f2640ee351f 159 Pfam PF13787 Protein of unknown function with HXXEE motif 9 116 5.5E-15 T 22-04-2016 IPR025671 Protein of unknown function with HXXEE motif TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 5 130 1.9E-19 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 Gene3D G3DSA:3.90.470.20 2 129 2.6E-34 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 4 131 1.6E-23 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 SUPERFAMILY SSF56214 4 129 2.09E-23 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 7 100 2.4E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 5 131 22.818 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS08015 69b9c6362b19a909d13ed41e97fe860c 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 10 96 1.0E-30 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 Pfam PF00593 TonB dependent receptor 408 645 4.4E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 PANTHER PTHR32552:SF15 32 646 7.4E-41 T 22-04-2016 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 1.6E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 Gene3D G3DSA:2.170.130.10 46 169 1.9E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 PANTHER PTHR32552 32 646 7.4E-41 T 22-04-2016 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 Gene3D G3DSA:2.40.170.20 170 645 1.0E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS10430 a0d1618d7b2945ac6d5f46439a844796 646 SUPERFAMILY SSF56935 54 646 1.51E-95 T 22-04-2016 TMO_RS16200 51b0546f26bc62572f31be6b3616d2c3 471 Pfam PF04434 SWIM zinc finger 64 84 4.9E-6 T 22-04-2016 IPR007527 Zinc finger, SWIM-type GO:0008270 TMO_RS12165 36555dfe38d3488b2bf7d348f804492c 82 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 9 74 9.2E-11 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 SUPERFAMILY SSF46689 7 74 4.57E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 PANTHER PTHR30055 4 197 4.8E-18 T 22-04-2016 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 PANTHER PTHR30055:SF2 4 197 4.8E-18 T 22-04-2016 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 Gene3D G3DSA:1.10.357.10 14 202 3.4E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 9.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 9.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS01670 75a3a27efc446835c8bf293fa03cd2ae 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 6.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 TMO_RS08930 72a0c79cacdc73ddab2c9cde10712ac6 264 PANTHER PTHR13773 2 255 2.5E-49 T 22-04-2016 TMO_RS08930 72a0c79cacdc73ddab2c9cde10712ac6 264 Pfam PF01148 Cytidylyltransferase family 2 253 1.1E-55 T 22-04-2016 TMO_RS08930 72a0c79cacdc73ddab2c9cde10712ac6 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 214 240 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 TMO_RS08930 72a0c79cacdc73ddab2c9cde10712ac6 264 PANTHER PTHR13773:SF0 2 255 2.5E-49 T 22-04-2016 TMO_RS02890 17a88e76f8dda445fe14a061f2b61bbb 143 PANTHER PTHR12735 5 140 3.4E-47 T 22-04-2016 TMO_RS02890 17a88e76f8dda445fe14a061f2b61bbb 143 Gene3D G3DSA:3.90.1010.10 3 140 3.9E-52 T 22-04-2016 TMO_RS02890 17a88e76f8dda445fe14a061f2b61bbb 143 Pfam PF02657 Fe-S metabolism associated domain 10 132 1.0E-46 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 TMO_RS02890 17a88e76f8dda445fe14a061f2b61bbb 143 PANTHER PTHR12735:SF26 5 140 3.4E-47 T 22-04-2016 TMO_RS02890 17a88e76f8dda445fe14a061f2b61bbb 143 SUPERFAMILY SSF82649 5 137 3.51E-44 T 22-04-2016 TMO_RS06855 5d5c11d07dcd96a703ca48e9208af913 131 Gene3D G3DSA:3.40.250.10 2 125 2.5E-30 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS06855 5d5c11d07dcd96a703ca48e9208af913 131 SUPERFAMILY SSF52821 8 126 4.45E-29 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS06855 5d5c11d07dcd96a703ca48e9208af913 131 SMART SM00450 19 123 2.9E-16 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS06855 5d5c11d07dcd96a703ca48e9208af913 131 Pfam PF00581 Rhodanese-like domain 22 120 1.1E-14 T 22-04-2016 IPR001763 Rhodanese-like domain TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 PANTHER PTHR22911 21 306 8.7E-71 T 22-04-2016 TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 Pfam PF00892 EamA-like transporter family 168 303 2.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 Pfam PF00892 EamA-like transporter family 22 153 1.9E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 PANTHER PTHR22911:SF63 21 306 8.7E-71 T 22-04-2016 TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 SUPERFAMILY SSF103481 205 306 1.31E-8 T 22-04-2016 TMO_RS07180 9f53a303a0a238626d3d2a75bf6041d0 306 SUPERFAMILY SSF103481 56 155 4.05E-10 T 22-04-2016 TMO_RS13920 79931931617793167a3a8975aa958fed 655 Pfam PF00593 TonB dependent receptor 412 651 1.0E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS13920 79931931617793167a3a8975aa958fed 655 SUPERFAMILY SSF56935 50 655 6.41E-85 T 22-04-2016 TMO_RS13920 79931931617793167a3a8975aa958fed 655 PANTHER PTHR32552:SF0 7 653 5.6E-34 T 22-04-2016 TMO_RS13920 79931931617793167a3a8975aa958fed 655 PANTHER PTHR32552 7 653 5.6E-34 T 22-04-2016 TMO_RS13920 79931931617793167a3a8975aa958fed 655 Gene3D G3DSA:2.170.130.10 25 157 5.6E-27 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13920 79931931617793167a3a8975aa958fed 655 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 155 4.3E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 TMO_RS13920 79931931617793167a3a8975aa958fed 655 Gene3D G3DSA:2.40.170.20 158 651 4.0E-58 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 Gene3D G3DSA:3.40.190.10 124 261 1.4E-5 T 22-04-2016 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 PANTHER PTHR30349:SF16 1 277 1.6E-49 T 22-04-2016 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 PANTHER PTHR30349 1 277 1.6E-49 T 22-04-2016 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 48 301 7.3E-52 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 SUPERFAMILY SSF53850 106 282 2.1E-12 T 22-04-2016 TMO_RS11465 636af89e6055fe0117c7a4f11a5d20ae 319 PIRSF PIRSF017082 1 317 2.3E-90 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 Pfam PF02649 Type I GTP cyclohydrolase folE2 14 297 9.5E-62 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 Gene3D G3DSA:3.10.270.10 203 299 4.8E-67 T 22-04-2016 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 Gene3D G3DSA:3.10.270.10 13 171 4.8E-67 T 22-04-2016 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 PANTHER PTHR36445 9 297 9.3E-64 T 22-04-2016 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 PANTHER PTHR36445:SF1 9 297 9.3E-64 T 22-04-2016 TMO_RS02690 a9ee573de41bf0d85287d058f611b2fd 300 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 300 30.488 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 318 329 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 Pfam PF00171 Aldehyde dehydrogenase family 62 521 2.7E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 290 297 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 Gene3D G3DSA:3.40.605.10 48 304 2.1E-69 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 PANTHER PTHR11699 27 503 5.5E-126 T 22-04-2016 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 SUPERFAMILY SSF53720 53 525 1.18E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 TMO_RS07935 9b8faa5c56d158798a8dd2811d3f9b8c 530 Gene3D G3DSA:3.40.309.10 305 481 1.0E-47 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 TMO_RS15235 c9c62406217a7b4070f2eaec7f07621a 145 Pfam PF07386 Protein of unknown function (DUF1499) 37 137 7.8E-12 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 TMO_RS09440 d927d2513fa820bcf8890150190bc37d 255 Pfam PF02674 Colicin V production protein 7 148 4.4E-30 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 TMO_RS09440 d927d2513fa820bcf8890150190bc37d 255 PANTHER PTHR36926:SF1 2 157 1.2E-27 T 22-04-2016 TMO_RS09440 d927d2513fa820bcf8890150190bc37d 255 PANTHER PTHR36926 2 157 1.2E-27 T 22-04-2016 TMO_RS01185 21278c2b9ef26a7a546b0768bbb8f7fa 387 Pfam PF08264 Anticodon-binding domain of tRNA 192 321 1.1E-7 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 TMO_RS01185 21278c2b9ef26a7a546b0768bbb8f7fa 387 SUPERFAMILY SSF47323 167 321 3.71E-18 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS01185 21278c2b9ef26a7a546b0768bbb8f7fa 387 Gene3D G3DSA:1.10.730.10 186 321 2.5E-14 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 TMO_RS29415 e64fdf50fbcef3b22ac336994c64b81c 147 Pfam PF05751 FixH 1 138 9.4E-19 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH TMO_RS10745 35abd58eba7059e9526e5462915b52d0 295 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 283 6.0E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS10745 35abd58eba7059e9526e5462915b52d0 295 PANTHER PTHR11795 10 295 1.5E-121 T 22-04-2016 TMO_RS10745 35abd58eba7059e9526e5462915b52d0 295 PANTHER PTHR11795:SF379 10 295 1.5E-121 T 22-04-2016 TMO_RS16720 eb0cb6892ca0f503ccb05093f1630264 114 PANTHER PTHR37811:SF2 2 111 7.7E-31 T 22-04-2016 TMO_RS16720 eb0cb6892ca0f503ccb05093f1630264 114 SUPERFAMILY SSF54909 1 99 8.59E-23 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS16720 eb0cb6892ca0f503ccb05093f1630264 114 Pfam PF03992 Antibiotic biosynthesis monooxygenase 2 76 5.0E-14 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain TMO_RS16720 eb0cb6892ca0f503ccb05093f1630264 114 Gene3D G3DSA:3.30.70.900 2 101 3.3E-20 T 22-04-2016 TMO_RS16720 eb0cb6892ca0f503ccb05093f1630264 114 PANTHER PTHR37811 2 111 7.7E-31 T 22-04-2016 TMO_RS20750 2462171e40c78764e1af2cd620522639 78 SUPERFAMILY SSF81923 1 37 1.88E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS20750 2462171e40c78764e1af2cd620522639 78 Gene3D G3DSA:1.10.1780.10 2 37 2.8E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 TMO_RS03680 96d6861754c1a1bd70fe8433930dc6de 351 PANTHER PTHR30590:SF2 1 348 1.3E-31 T 22-04-2016 TMO_RS03680 96d6861754c1a1bd70fe8433930dc6de 351 Pfam PF04235 Protein of unknown function (DUF418) 194 348 8.8E-17 T 22-04-2016 IPR007349 Domain of unknown function DUF418 TMO_RS03680 96d6861754c1a1bd70fe8433930dc6de 351 PANTHER PTHR30590 1 348 1.3E-31 T 22-04-2016 TMO_RS16760 289d8ad4e42348d7a7de53d5b8431b4e 429 Pfam PF00563 EAL domain 192 425 3.0E-20 T 22-04-2016 IPR001633 EAL domain TMO_RS16760 289d8ad4e42348d7a7de53d5b8431b4e 429 SUPERFAMILY SSF141868 192 426 2.35E-18 T 22-04-2016 IPR001633 EAL domain TMO_RS16760 289d8ad4e42348d7a7de53d5b8431b4e 429 Gene3D G3DSA:3.20.20.450 190 426 1.2E-18 T 22-04-2016 IPR001633 EAL domain TMO_RS12480 288cbab54a29770bb057cebb1a8f6fae 101 PANTHER PTHR34703 1 81 3.4E-20 T 22-04-2016 TMO_RS12480 288cbab54a29770bb057cebb1a8f6fae 101 Pfam PF03334 Na+/H+ antiporter subunit 1 73 7.2E-24 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 TMO_RS12480 288cbab54a29770bb057cebb1a8f6fae 101 PANTHER PTHR34703:SF1 1 81 3.4E-20 T 22-04-2016 TMO_RS12480 288cbab54a29770bb057cebb1a8f6fae 101 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 2 82 4.7E-22 T 22-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 TMO_RS29115 f8345a2289d655e24f7d30c9efaf302c 140 Gene3D G3DSA:3.30.160.170 55 135 4.1E-13 T 22-04-2016 IPR005186 FlaG protein TMO_RS29115 f8345a2289d655e24f7d30c9efaf302c 140 Pfam PF03646 FlaG protein 55 137 1.3E-12 T 22-04-2016 IPR005186 FlaG protein TMO_RS29115 f8345a2289d655e24f7d30c9efaf302c 140 SUPERFAMILY SSF160214 67 139 3.27E-14 T 22-04-2016 IPR005186 FlaG protein TMO_RS16670 429c12e1b7744a34516c1a5179fbccf8 114 Pfam PF05154 TM2 domain 31 76 4.2E-13 T 22-04-2016 IPR007829 TM2 domain TMO_RS05705 376bebf4ba3938e79f9ef62ee96dc596 179 SUPERFAMILY SSF55729 21 169 2.06E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS05705 376bebf4ba3938e79f9ef62ee96dc596 179 Gene3D G3DSA:3.40.630.30 22 169 5.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS05705 376bebf4ba3938e79f9ef62ee96dc596 179 Pfam PF00583 Acetyltransferase (GNAT) family 87 166 2.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 TMO_RS15970 ecfd8a39dc77d379dca7590d4d9296cd 254 PANTHER PTHR40279 3 242 9.7E-15 T 22-04-2016 TMO_RS15970 ecfd8a39dc77d379dca7590d4d9296cd 254 Pfam PF14518 Iron-containing redox enzyme 37 229 8.5E-37 T 22-04-2016 IPR028201 PqqC-like protein TMO_RS15970 ecfd8a39dc77d379dca7590d4d9296cd 254 Gene3D G3DSA:1.20.910.10 2 250 1.2E-49 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS15970 ecfd8a39dc77d379dca7590d4d9296cd 254 SUPERFAMILY SSF48613 3 235 3.64E-38 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 TMO_RS15970 ecfd8a39dc77d379dca7590d4d9296cd 254 SMART SM01236 70 181 1.3E-15 T 22-04-2016 TMO_RS11620 c9b4368fda70d47081e892bf2dcdd535 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 157 3.1E-18 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS04300 a85ec966a252e1699099c89c338b5b66 197 Pfam PF06242 Protein of unknown function (DUF1013) 34 167 1.6E-63 T 22-04-2016 IPR010421 Protein of unknown function DUF1013 TMO_RS05635 f86e46678a8f2ca4948c20cabd0d0dc3 94 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 81 3.0E-16 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS05635 f86e46678a8f2ca4948c20cabd0d0dc3 94 Gene3D G3DSA:3.40.1690.10 6 86 1.3E-20 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_RS05635 f86e46678a8f2ca4948c20cabd0d0dc3 94 SUPERFAMILY SSF160544 5 86 7.19E-20 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal TMO_RS05635 f86e46678a8f2ca4948c20cabd0d0dc3 94 PANTHER PTHR30531 6 94 2.7E-21 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 PANTHER PTHR10277 153 367 1.2E-50 T 22-04-2016 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 SUPERFAMILY SSF51569 16 296 1.81E-30 T 22-04-2016 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 Gene3D G3DSA:3.20.20.70 17 86 3.9E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 Gene3D G3DSA:3.20.20.70 150 348 4.7E-47 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 PANTHER PTHR10277:SF9 153 367 1.2E-50 T 22-04-2016 TMO_RS28895 8749443f6f6e7b9b8d0bc2e47318ad02 401 Pfam PF00682 HMGL-like 19 273 4.1E-21 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS03085 567ebca6aeb20f5c919b117e4fc516ba 371 PANTHER PTHR22893 1 365 1.1E-173 T 22-04-2016 TMO_RS03085 567ebca6aeb20f5c919b117e4fc516ba 371 Gene3D G3DSA:3.20.20.70 9 363 6.4E-131 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS03085 567ebca6aeb20f5c919b117e4fc516ba 371 SUPERFAMILY SSF51395 8 365 7.89E-121 T 22-04-2016 TMO_RS03085 567ebca6aeb20f5c919b117e4fc516ba 371 PANTHER PTHR22893:SF14 1 365 1.1E-173 T 22-04-2016 TMO_RS03085 567ebca6aeb20f5c919b117e4fc516ba 371 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 341 9.4E-83 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 TMO_RS10505 978cf1114695594e2bea971d3aecbe7d 162 PANTHER PTHR12418 25 147 2.4E-22 T 22-04-2016 TMO_RS10505 978cf1114695594e2bea971d3aecbe7d 162 SUPERFAMILY SSF54637 31 150 8.34E-29 T 22-04-2016 IPR029069 HotDog domain TMO_RS10505 978cf1114695594e2bea971d3aecbe7d 162 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 147 2.7E-15 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain TMO_RS10505 978cf1114695594e2bea971d3aecbe7d 162 Gene3D G3DSA:3.10.129.10 29 149 3.7E-31 T 22-04-2016 IPR029069 HotDog domain TMO_RS10505 978cf1114695594e2bea971d3aecbe7d 162 Pfam PF03061 Thioesterase superfamily 63 140 5.7E-11 T 22-04-2016 IPR006683 Thioesterase domain TMO_RS28500 e6dba4e1a42acaee93ed4c1eb663dc57 169 Gene3D G3DSA:3.40.50.300 123 169 3.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS17265 c5798b9935ed85d08f45302fe76d540b 288 Pfam PF13578 Methyltransferase domain 108 208 3.0E-10 T 22-04-2016 TMO_RS17265 c5798b9935ed85d08f45302fe76d540b 288 SUPERFAMILY SSF53335 81 230 3.33E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17265 c5798b9935ed85d08f45302fe76d540b 288 Gene3D G3DSA:3.40.50.150 94 225 6.1E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS09725 2f5f59a7ea96fce7cb1c70de77bbea81 66 Pfam PF04102 SlyX 1 59 1.5E-11 T 22-04-2016 IPR007236 SlyX TMO_RS17100 79f14802c90130918ffcea58821fc465 174 Pfam PF04186 FxsA cytoplasmic membrane protein 10 114 7.8E-33 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 TMO_RS17100 79f14802c90130918ffcea58821fc465 174 PANTHER PTHR35335 7 172 2.8E-28 T 22-04-2016 TMO_RS17100 79f14802c90130918ffcea58821fc465 174 PANTHER PTHR35335:SF1 7 172 2.8E-28 T 22-04-2016 TMO_RS21640 d727fdc36e6f500ed2db1db46f98e3e8 100 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 48 3.5E-9 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS21640 d727fdc36e6f500ed2db1db46f98e3e8 100 Gene3D G3DSA:3.30.160.100 2 50 8.3E-10 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS21640 d727fdc36e6f500ed2db1db46f98e3e8 100 SUPERFAMILY SSF69754 2 58 9.81E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 TMO_RS04045 0f79068ed3fa9e4f82d8f5fec0d42dbc 157 SUPERFAMILY SSF55729 2 131 7.8E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS04045 0f79068ed3fa9e4f82d8f5fec0d42dbc 157 Gene3D G3DSA:3.40.630.30 1 129 2.6E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 PANTHER PTHR30177:SF14 262 329 2.5E-113 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 SUPERFAMILY SSF53850 30 341 3.47E-79 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 324 2.1E-69 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 PANTHER PTHR30177 262 329 2.5E-113 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 PANTHER PTHR30177 11 242 2.5E-113 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 Gene3D G3DSA:3.40.190.100 120 277 5.7E-47 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 Gene3D G3DSA:3.40.190.10 278 337 2.0E-21 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 Gene3D G3DSA:3.40.190.10 33 118 2.0E-21 T 22-04-2016 TMO_RS14880 8649a1cb590f2bbe6ef54ef3801cf744 347 PANTHER PTHR30177:SF14 11 242 2.5E-113 T 22-04-2016 TMO_RS16225 4afe0b4489c549d77b19ce5ebe7b1219 117 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 116 6.3E-16 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid TMO_RS16225 4afe0b4489c549d77b19ce5ebe7b1219 117 Pfam PF09538 Protein of unknown function (FYDLN_acid) 2 114 8.9E-25 T 22-04-2016 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid TMO_RS16225 4afe0b4489c549d77b19ce5ebe7b1219 117 Gene3D G3DSA:2.20.28.10 8 42 2.9E-4 T 22-04-2016 IPR004039 Rubredoxin-type fold TMO_RS14255 06cf1a9f99b33ce42ec19b580dd291fb 275 Gene3D G3DSA:3.60.21.10 1 216 1.9E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS14255 06cf1a9f99b33ce42ec19b580dd291fb 275 SUPERFAMILY SSF56300 1 251 1.5E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS14255 06cf1a9f99b33ce42ec19b580dd291fb 275 Pfam PF00149 Calcineurin-like phosphoesterase 1 200 4.4E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 TMO_RS12630 bacaf8dc90b6b62adef44ee4cd109da9 207 SUPERFAMILY SSF55729 52 167 1.04E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS12630 bacaf8dc90b6b62adef44ee4cd109da9 207 Gene3D G3DSA:3.40.630.30 57 157 4.6E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS06695 41c7cd5d38fe6e7deff8c83478d34828 65 Gene3D G3DSA:2.10.70.10 29 65 1.6E-18 T 22-04-2016 TMO_RS06695 41c7cd5d38fe6e7deff8c83478d34828 65 Pfam PF10636 Hemin uptake protein hemP 30 65 1.3E-18 T 22-04-2016 IPR019600 Hemin uptake protein HemP TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 Pfam PF13464 Domain of unknown function (DUF4115) 328 398 4.0E-18 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 PANTHER PTHR34475:SF1 25 216 3.3E-30 T 22-04-2016 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 PANTHER PTHR34475:SF1 268 407 3.3E-30 T 22-04-2016 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 PANTHER PTHR34475 25 216 3.3E-30 T 22-04-2016 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 PANTHER PTHR34475 268 407 3.3E-30 T 22-04-2016 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 Pfam PF13413 Helix-turn-helix domain 42 99 3.7E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS01915 bf90a0ef82693cd7ef324f66df2ea182 411 Gene3D G3DSA:1.10.260.40 38 117 3.2E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS13875 2647518405328350d0d462649778eaa5 205 PANTHER PTHR11080 1 198 4.7E-46 T 22-04-2016 TMO_RS13875 2647518405328350d0d462649778eaa5 205 PANTHER PTHR11080:SF17 1 198 4.7E-46 T 22-04-2016 TMO_RS13875 2647518405328350d0d462649778eaa5 205 Pfam PF00857 Isochorismatase family 27 197 1.4E-33 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS13875 2647518405328350d0d462649778eaa5 205 SUPERFAMILY SSF52499 9 199 1.05E-44 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS13875 2647518405328350d0d462649778eaa5 205 Gene3D G3DSA:3.40.50.850 12 198 2.5E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS10095 954d8ea3f366ff2d73760cb858ddace5 178 SUPERFAMILY SSF52499 2 178 1.31E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS10095 954d8ea3f366ff2d73760cb858ddace5 178 Gene3D G3DSA:3.40.50.850 2 178 2.4E-59 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS10095 954d8ea3f366ff2d73760cb858ddace5 178 PANTHER PTHR14119 7 178 6.9E-57 T 22-04-2016 TMO_RS10095 954d8ea3f366ff2d73760cb858ddace5 178 Pfam PF00857 Isochorismatase family 7 155 9.0E-33 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 TMO_RS27360 4010323bc6a9f942279d92316aefa3c0 80 SUPERFAMILY SSF51569 1 79 4.94E-19 T 22-04-2016 TMO_RS27360 4010323bc6a9f942279d92316aefa3c0 80 PANTHER PTHR10277 1 80 2.5E-31 T 22-04-2016 TMO_RS27360 4010323bc6a9f942279d92316aefa3c0 80 PANTHER PTHR10277:SF9 1 80 2.5E-31 T 22-04-2016 TMO_RS27360 4010323bc6a9f942279d92316aefa3c0 80 Gene3D G3DSA:3.20.20.70 1 79 8.7E-24 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS27360 4010323bc6a9f942279d92316aefa3c0 80 Pfam PF00682 HMGL-like 1 80 8.2E-20 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 TMO_RS08290 b194395988de2e4fd0c2c075f14b7afb 142 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 135 12.644 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08290 b194395988de2e4fd0c2c075f14b7afb 142 Gene3D G3DSA:2.60.15.10 4 90 3.2E-15 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08290 b194395988de2e4fd0c2c075f14b7afb 142 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 9.0E-16 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08290 b194395988de2e4fd0c2c075f14b7afb 142 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 31 75 1.0E-4 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS08290 b194395988de2e4fd0c2c075f14b7afb 142 SUPERFAMILY SSF51344 6 88 1.7E-17 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Pfam PF00231 ATP synthase 3 297 3.2E-92 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 297 7.6E-102 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:1.10.287.80 247 292 8.8E-30 T 22-04-2016 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 283 296 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.0E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.0E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 275 296 1.0E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PRINTS PR00126 ATP synthase gamma subunit signature 244 263 1.0E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:3.40.1380.10 74 196 1.1E-35 T 22-04-2016 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PANTHER PTHR11693 1 297 4.4E-126 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 SUPERFAMILY SSF52943 3 297 6.28E-88 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 PIRSF PIRSF039089 1 297 4.7E-105 T 22-04-2016 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:1.10.287.80 212 246 8.0E-34 T 22-04-2016 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Gene3D G3DSA:1.10.287.80 19 60 8.0E-34 T 22-04-2016 TMO_RS15050 34669e9a3b38de6e37375fd43116d3ee 297 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 297 33.197 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 SUPERFAMILY SSF74653 195 278 1.83E-17 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PANTHER PTHR33446 52 281 4.6E-16 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 204 280 5.5E-21 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 202 280 3.5E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 75 91 2.6E-10 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 113 138 2.6E-10 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 35 47 2.6E-10 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 94 111 2.6E-10 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PRINTS PR01217 Proline rich extensin signature 54 75 2.6E-10 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 Gene3D G3DSA:3.30.1150.10 166 281 4.3E-24 T 22-04-2016 TMO_RS13495 47b419eb26dc252b4ef1a84f30d3e6c1 281 PANTHER PTHR33446:SF2 52 281 4.6E-16 T 22-04-2016 TMO_RS08275 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 SUPERFAMILY SSF52016 11 166 8.44E-18 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS08275 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 PANTHER PTHR11670 6 171 1.5E-24 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 TMO_RS08275 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 PANTHER PTHR11670:SF41 6 171 1.5E-24 T 22-04-2016 TMO_RS08275 bbc7b5d942a3f8aa6bb54bc88b5d4c23 176 Gene3D G3DSA:3.20.19.10 53 133 2.4E-6 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel TMO_RS11255 7f3a8d30d98227f96cdb53085b64a744 171 Pfam PF14342 Domain of unknown function (DUF4396) 31 159 4.7E-40 T 22-04-2016 IPR025509 Domain of unknown function DUF4396 TMO_RS02925 ad9effeb8dd16c957c078fb0606c2347 278 Pfam PF09140 ATPase MipZ 8 270 3.6E-110 T 22-04-2016 IPR015223 ATPase MipZ TMO_RS02925 ad9effeb8dd16c957c078fb0606c2347 278 PANTHER PTHR13696 7 277 8.3E-23 T 22-04-2016 TMO_RS02925 ad9effeb8dd16c957c078fb0606c2347 278 Gene3D G3DSA:3.40.50.300 7 242 2.6E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02925 ad9effeb8dd16c957c078fb0606c2347 278 PANTHER PTHR13696:SF54 7 277 8.3E-23 T 22-04-2016 TMO_RS02925 ad9effeb8dd16c957c078fb0606c2347 278 SUPERFAMILY SSF52540 7 239 2.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 Pfam PF02233 NAD(P) transhydrogenase beta subunit 1 444 3.6E-189 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 PANTHER PTHR10160:SF24 1 446 3.8E-237 T 22-04-2016 TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 PIRSF PIRSF000204 1 448 7.7E-215 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 PANTHER PTHR10160 1 446 3.8E-237 T 22-04-2016 TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 SUPERFAMILY SSF52467 274 448 1.68E-76 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS04190 b9a6c81532441f0c1d10aef69d5a9517 449 Gene3D G3DSA:3.40.50.1220 273 447 6.2E-88 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain TMO_RS14355 3fe1d22042777f8f4482e60d1e6ddb26 325 Gene3D G3DSA:1.10.3720.10 94 315 3.2E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14355 3fe1d22042777f8f4482e60d1e6ddb26 325 PANTHER PTHR30465:SF0 8 323 7.0E-118 T 22-04-2016 TMO_RS14355 3fe1d22042777f8f4482e60d1e6ddb26 325 SUPERFAMILY SSF161098 94 308 2.62E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14355 3fe1d22042777f8f4482e60d1e6ddb26 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 322 1.3E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14355 3fe1d22042777f8f4482e60d1e6ddb26 325 PANTHER PTHR30465 8 323 7.0E-118 T 22-04-2016 TMO_RS05305 f0b2656a829f766479d36e63f266d9a5 298 SUPERFAMILY SSF53335 19 217 7.99E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05305 f0b2656a829f766479d36e63f266d9a5 298 Gene3D G3DSA:3.40.50.150 49 222 8.6E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS05305 f0b2656a829f766479d36e63f266d9a5 298 Pfam PF13489 Methyltransferase domain 53 162 1.5E-9 T 22-04-2016 TMO_RS10655 72259eaf3de2123ca1b9badab0d5dab6 146 Gene3D G3DSA:3.30.300.20 39 135 9.5E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta TMO_RS10655 72259eaf3de2123ca1b9badab0d5dab6 146 Pfam PF02566 OsmC-like protein 33 130 2.6E-16 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS10655 72259eaf3de2123ca1b9badab0d5dab6 146 PANTHER PTHR34352 1 139 3.6E-52 T 22-04-2016 TMO_RS10655 72259eaf3de2123ca1b9badab0d5dab6 146 Gene3D G3DSA:2.20.25.10 1 34 6.1E-18 T 22-04-2016 TMO_RS10655 72259eaf3de2123ca1b9badab0d5dab6 146 SUPERFAMILY SSF82784 1 135 6.67E-40 T 22-04-2016 IPR003718 OsmC/Ohr family TMO_RS07420 1dc09203fd023042691de17d5f104039 129 Pfam PF03916 Polysulphide reductase, NrfD 21 78 3.0E-4 T 22-04-2016 IPR005614 NrfD family TMO_RS07335 79a288128287bc6e93f5a07cb8e0f55b 155 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 22 150 9.1E-34 T 22-04-2016 IPR005247 YbhB/YbcL TMO_RS07335 79a288128287bc6e93f5a07cb8e0f55b 155 Pfam PF01161 Phosphatidylethanolamine-binding protein 16 150 1.3E-34 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein TMO_RS07335 79a288128287bc6e93f5a07cb8e0f55b 155 PANTHER PTHR30289 1 152 1.2E-45 T 22-04-2016 TMO_RS07335 79a288128287bc6e93f5a07cb8e0f55b 155 Gene3D G3DSA:3.90.280.10 3 152 6.5E-48 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein TMO_RS07335 79a288128287bc6e93f5a07cb8e0f55b 155 SUPERFAMILY SSF49777 3 152 2.62E-43 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein TMO_RS09745 b8421c5018b275e7cb63df044fbf25b0 306 Gene3D G3DSA:3.40.50.1980 148 279 7.0E-6 T 22-04-2016 TMO_RS09745 b8421c5018b275e7cb63df044fbf25b0 306 Pfam PF01497 Periplasmic binding protein 24 251 1.2E-10 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 TMO_RS09745 b8421c5018b275e7cb63df044fbf25b0 306 SUPERFAMILY SSF53807 20 251 1.57E-24 T 22-04-2016 TMO_RS09745 b8421c5018b275e7cb63df044fbf25b0 306 Gene3D G3DSA:3.40.50.1980 21 135 2.1E-9 T 22-04-2016 TMO_RS23305 f4e08f3d3ad54d58c572f5ec425840bc 62 SUPERFAMILY SSF51905 2 60 3.24E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS23305 f4e08f3d3ad54d58c572f5ec425840bc 62 PANTHER PTHR23023 3 62 3.5E-19 T 22-04-2016 TMO_RS23305 f4e08f3d3ad54d58c572f5ec425840bc 62 Pfam PF00743 Flavin-binding monooxygenase-like 4 61 3.3E-10 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 TMO_RS23305 f4e08f3d3ad54d58c572f5ec425840bc 62 Gene3D G3DSA:3.50.50.60 3 61 8.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 TMO_RS23305 f4e08f3d3ad54d58c572f5ec425840bc 62 PANTHER PTHR23023:SF55 3 62 3.5E-19 T 22-04-2016 TMO_RS13825 9447b7ed64aec4999c00908387a7ae51 114 PANTHER PTHR35401 33 114 7.5E-26 T 22-04-2016 TMO_RS13825 9447b7ed64aec4999c00908387a7ae51 114 SUPERFAMILY SSF47598 30 106 1.04E-21 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 TMO_RS13825 9447b7ed64aec4999c00908387a7ae51 114 Pfam PF08681 Protein of unknown function (DUF1778) 33 109 2.0E-23 T 22-04-2016 IPR014795 Vibrio phage ICP1, Orf50 TMO_RS13825 9447b7ed64aec4999c00908387a7ae51 114 Gene3D G3DSA:1.20.5.780 30 110 6.7E-19 T 22-04-2016 TMO_RS29420 747da92d320895a42d4fdc748037bef6 268 SUPERFAMILY SSF53335 34 156 6.14E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS29420 747da92d320895a42d4fdc748037bef6 268 Gene3D G3DSA:3.40.50.150 39 162 2.3E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase TMO_RS17240 2912e83d197d8d380527ba3a4635d699 182 Pfam PF12100 Domain of unknown function (DUF3576) 76 177 2.3E-44 T 22-04-2016 IPR021959 Protein of unknown function DUF3576 TMO_RS29680 1b2dbd0b72088e8faf4c6ab84a149046 293 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 263 8.1E-15 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 TMO_RS29680 1b2dbd0b72088e8faf4c6ab84a149046 293 PANTHER PTHR40572 61 272 1.3E-38 T 22-04-2016 TMO_RS12765 128e5d182e814847b4a041d8e8f3ebb5 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 310 8.0E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12765 128e5d182e814847b4a041d8e8f3ebb5 317 PANTHER PTHR30193:SF5 8 311 3.4E-79 T 22-04-2016 TMO_RS12765 128e5d182e814847b4a041d8e8f3ebb5 317 SUPERFAMILY SSF161098 31 310 1.83E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS12765 128e5d182e814847b4a041d8e8f3ebb5 317 PANTHER PTHR30193 8 311 3.4E-79 T 22-04-2016 TMO_RS12765 128e5d182e814847b4a041d8e8f3ebb5 317 Gene3D G3DSA:1.10.3720.10 27 306 8.5E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 8.4E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 8.4E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 8.4E-28 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 PANTHER PTHR10031 3 75 1.5E-27 T 22-04-2016 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 Pfam PF00137 ATP synthase subunit C 9 71 1.0E-13 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 74 14.825 T 22-04-2016 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 SUPERFAMILY SSF81333 5 73 2.35E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 TMO_RS14015 1928214caa3b45a526ecb7f04ddc2d60 75 Gene3D G3DSA:1.20.20.10 6 73 3.1E-22 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 TMO_RS12740 79a4f7207eb1d14b1beee82b36f46b5f 258 PANTHER PTHR11941 6 255 2.4E-78 T 22-04-2016 TMO_RS12740 79a4f7207eb1d14b1beee82b36f46b5f 258 Gene3D G3DSA:3.90.226.10 4 255 5.7E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12740 79a4f7207eb1d14b1beee82b36f46b5f 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 255 3.8E-56 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 TMO_RS12740 79a4f7207eb1d14b1beee82b36f46b5f 258 SUPERFAMILY SSF52096 5 257 5.64E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS12740 79a4f7207eb1d14b1beee82b36f46b5f 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 22-04-2016 IPR020845 AMP-binding, conserved site TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 503 2.5E-18 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 PANTHER PTHR24096 3 514 1.0E-139 T 22-04-2016 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:3.30.300.30 414 513 1.3E-30 T 22-04-2016 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 SUPERFAMILY SSF56801 3 516 2.09E-134 T 22-04-2016 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Pfam PF00501 AMP-binding enzyme 8 419 3.7E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:3.40.50.980 3 171 2.3E-23 T 22-04-2016 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:3.40.50.980 172 323 9.8E-33 T 22-04-2016 TMO_RS02430 56ccfbeef4a09e10379c9970d234e42f 521 Gene3D G3DSA:2.30.38.10 338 410 3.5E-25 T 22-04-2016 TMO_RS29155 9e14bba1f0d032bb5a24335f2d0ccd01 222 Pfam PF10090 Histidine phosphotransferase 14 188 1.2E-41 T 22-04-2016 IPR018762 Histidine phosphotransferase TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 PANTHER PTHR11715 2 125 2.0E-68 T 22-04-2016 IPR002930 Glycine cleavage system H-protein TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 Pfam PF01597 Glycine cleavage H-protein 4 122 1.0E-44 T 22-04-2016 IPR002930 Glycine cleavage system H-protein TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 121 3.9E-46 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 44 73 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 Gene3D G3DSA:2.40.50.100 4 123 9.6E-53 T 22-04-2016 TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 30.038 T 22-04-2016 IPR002930 Glycine cleavage system H-protein TMO_RS14060 388efada9b07bc261c98da933aa2c9b8 125 SUPERFAMILY SSF51230 2 122 3.66E-46 T 22-04-2016 IPR011053 Single hybrid motif TMO_RS07290 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 Pfam PF00248 Aldo/keto reductase family 63 315 1.7E-28 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07290 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 Gene3D G3DSA:3.20.20.100 50 315 5.8E-42 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07290 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 SUPERFAMILY SSF51430 50 315 1.7E-48 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain TMO_RS07290 ed9d476c190a8cea5a47c5e4fe5ea7bd 360 PANTHER PTHR11732 48 316 4.8E-43 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta TMO_RS02680 02708c71a06301530c6fede27cc4343a 289 Gene3D G3DSA:3.10.129.10 137 272 3.1E-9 T 22-04-2016 IPR029069 HotDog domain TMO_RS02680 02708c71a06301530c6fede27cc4343a 289 SUPERFAMILY SSF54637 182 286 1.03E-13 T 22-04-2016 IPR029069 HotDog domain TMO_RS02680 02708c71a06301530c6fede27cc4343a 289 Pfam PF13452 N-terminal half of MaoC dehydratase 13 143 3.0E-11 T 22-04-2016 TMO_RS02680 02708c71a06301530c6fede27cc4343a 289 PANTHER PTHR28152 22 289 1.4E-56 T 22-04-2016 TMO_RS03345 f9b13ed348211c1fc2cb63d8868636ca 305 SUPERFAMILY SSF53187 19 289 7.53E-86 T 22-04-2016 TMO_RS03345 f9b13ed348211c1fc2cb63d8868636ca 305 Gene3D G3DSA:3.40.630.40 16 289 3.4E-99 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 TMO_RS03345 f9b13ed348211c1fc2cb63d8868636ca 305 Pfam PF05013 N-formylglutamate amidohydrolase 30 264 1.2E-72 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase TMO_RS07810 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 Gene3D G3DSA:1.10.600.10 66 283 3.6E-18 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS07810 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 SUPERFAMILY SSF48576 13 283 4.75E-46 T 22-04-2016 IPR008949 Isoprenoid synthase domain TMO_RS07810 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 PANTHER PTHR21181 1 219 1.2E-39 T 22-04-2016 TMO_RS07810 2fd8bd8ded22e8ee3b42a7946a1ddc22 285 Pfam PF00494 Squalene/phytoene synthase 24 269 1.6E-40 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 TMO_RS03170 07b568aa65bb3a1a9d5eda7a7c9aa15a 130 Pfam PF07027 Protein of unknown function (DUF1318) 39 129 8.8E-27 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 TMO_RS17530 26f43e0cb6ef56d0a3213c6000640725 374 PANTHER PTHR30294:SF22 1 373 6.5E-143 T 22-04-2016 TMO_RS17530 26f43e0cb6ef56d0a3213c6000640725 374 Pfam PF12698 ABC-2 family transporter protein 23 363 1.2E-31 T 22-04-2016 TMO_RS17530 26f43e0cb6ef56d0a3213c6000640725 374 PANTHER PTHR30294 1 373 6.5E-143 T 22-04-2016 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Gene3D G3DSA:3.40.50.10490 70 187 1.9E-23 T 22-04-2016 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Gene3D G3DSA:3.40.50.10490 188 408 1.6E-61 T 22-04-2016 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 399 416 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 SUPERFAMILY SSF53697 70 425 9.54E-87 T 22-04-2016 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PANTHER PTHR11469:SF1 73 421 2.6E-70 T 22-04-2016 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 263 284 1.8E-14 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 186 204 1.8E-14 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 367 385 1.8E-14 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 74 93 1.8E-14 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PRINTS PR00662 Glucose-6-phosphate isomerase signature 399 412 1.8E-14 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 Pfam PF00342 Phosphoglucose isomerase 71 285 3.3E-17 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS14545 d6cae7adc5c7d10e8ea3e4367e49ddf1 427 PANTHER PTHR11469 73 421 2.6E-70 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 SMART SM00387 481 589 4.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 Gene3D G3DSA:3.30.565.10 445 588 2.6E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 6.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 PANTHER PTHR24423 378 587 5.6E-35 T 22-04-2016 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 PANTHER PTHR24423:SF439 378 587 5.6E-35 T 22-04-2016 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 Pfam PF07695 7TM diverse intracellular signalling 140 342 3.9E-28 T 22-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 SUPERFAMILY SSF55874 442 588 9.17E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS13810 e273da01dd5800f00b4e59785a0fec3d 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 587 1.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain TMO_RS09525 57d4ab47507bcba533d681da0f7d645e 237 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 65 236 1.8E-84 T 22-04-2016 IPR018655 Protein of unknown function DUF2086 TMO_RS10455 56692754539f16eec860b211aa80fc9f 1501 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1155 1501 3.0E-60 T 22-04-2016 IPR007452 Translocation and assembly module TamB TMO_RS10455 56692754539f16eec860b211aa80fc9f 1501 PANTHER PTHR36985 1093 1500 1.2E-28 T 22-04-2016 TMO_RS00580 450b74c2b80fd2fb76fd794daca32d2e 228 Pfam PF07298 NnrU protein 7 226 1.5E-54 T 22-04-2016 IPR009915 NnrU domain TMO_RS16735 8c68a2188915363514ef8b8bc50540a3 411 TIGRFAM TIGR00843 benE: benzoate transporter 19 389 3.2E-114 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS16735 8c68a2188915363514ef8b8bc50540a3 411 Pfam PF03594 Benzoate membrane transport protein 19 387 2.4E-133 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS16735 8c68a2188915363514ef8b8bc50540a3 411 PANTHER PTHR30199:SF0 1 400 9.8E-130 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 TMO_RS16735 8c68a2188915363514ef8b8bc50540a3 411 PANTHER PTHR30199 1 400 9.8E-130 T 22-04-2016 TMO_RS07985 89ce12311f27d7c20023b7338ae23efb 180 Pfam PF01936 NYN domain 14 171 1.4E-38 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type TMO_RS07985 89ce12311f27d7c20023b7338ae23efb 180 PANTHER PTHR35458 13 180 1.2E-83 T 22-04-2016 TMO_RS07985 89ce12311f27d7c20023b7338ae23efb 180 Gene3D G3DSA:3.40.50.1010 10 175 4.5E-48 T 22-04-2016 IPR029060 PIN domain-like TMO_RS07985 89ce12311f27d7c20023b7338ae23efb 180 PANTHER PTHR35458:SF1 13 180 1.2E-83 T 22-04-2016 TMO_RS17315 12d8e24ed5bf84c6223db4306d570bfe 139 PANTHER PTHR12589:SF4 1 136 2.5E-43 T 22-04-2016 TMO_RS17315 12d8e24ed5bf84c6223db4306d570bfe 139 Gene3D G3DSA:3.30.479.10 1 130 4.2E-40 T 22-04-2016 TMO_RS17315 12d8e24ed5bf84c6223db4306d570bfe 139 PANTHER PTHR12589 1 136 2.5E-43 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein TMO_RS17315 12d8e24ed5bf84c6223db4306d570bfe 139 SUPERFAMILY SSF55620 1 130 9.45E-28 T 22-04-2016 TMO_RS17315 12d8e24ed5bf84c6223db4306d570bfe 139 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 129 1.1E-20 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein TMO_RS13705 55fa057da41b9f54f37929fd861da191 256 Pfam PF09335 SNARE associated Golgi protein 88 204 1.2E-18 T 22-04-2016 IPR032816 SNARE associated Golgi protein TMO_RS13705 55fa057da41b9f54f37929fd861da191 256 PANTHER PTHR12677 20 254 2.4E-31 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.1E-40 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 Gene3D G3DSA:3.90.226.10 55 276 2.2E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 5.9E-126 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 SUPERFAMILY SSF52096 5 313 4.02E-95 T 22-04-2016 IPR029045 ClpP/crotonase-like domain TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PANTHER PTHR22855:SF42 2 314 1.1E-110 T 22-04-2016 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 47.77 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 147 2.3E-59 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 TMO_RS01790 1ec1bbc7d6aed39bc99626cd2c28793d 317 PANTHER PTHR22855 2 314 1.1E-110 T 22-04-2016 TMO_RS02270 a58f96f55f794305e4bfb545b1b9ddc8 209 PANTHER PTHR30086 3 209 1.1E-78 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS02270 a58f96f55f794305e4bfb545b1b9ddc8 209 Pfam PF01810 LysE type translocator 18 202 6.7E-34 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS02270 a58f96f55f794305e4bfb545b1b9ddc8 209 PANTHER PTHR30086:SF0 3 209 1.1E-78 T 22-04-2016 TMO_RS16850 bff9a051ed744e87f02ba84759f1cacd 235 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 11 219 1.9E-34 T 22-04-2016 TMO_RS16850 bff9a051ed744e87f02ba84759f1cacd 235 PANTHER PTHR42208 1 229 3.6E-22 T 22-04-2016 TMO_RS16850 bff9a051ed744e87f02ba84759f1cacd 235 PANTHER PTHR42208:SF1 1 229 3.6E-22 T 22-04-2016 TMO_RS07520 86e2e00e4d0741ca209cecbb2674239f 157 Gene3D G3DSA:3.10.450.50 25 151 1.9E-30 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS07520 86e2e00e4d0741ca209cecbb2674239f 157 Pfam PF07366 SnoaL-like polyketide cyclase 33 146 1.5E-23 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain TMO_RS07520 86e2e00e4d0741ca209cecbb2674239f 157 SUPERFAMILY SSF54427 25 150 2.14E-31 T 22-04-2016 IPR032710 NTF2-like domain TMO_RS07520 86e2e00e4d0741ca209cecbb2674239f 157 PANTHER PTHR38436 22 157 3.2E-19 T 22-04-2016 TMO_RS17685 14be2170e9fd366b25043102a335c198 303 PANTHER PTHR30269 11 292 2.1E-68 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS17685 14be2170e9fd366b25043102a335c198 303 PANTHER PTHR30269:SF15 11 292 2.1E-68 T 22-04-2016 TMO_RS17685 14be2170e9fd366b25043102a335c198 303 Pfam PF01925 Sulfite exporter TauE/SafE 18 282 3.2E-48 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS01445 3f55bcee8e91c9101f73dd3b3fbd3c7b 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 162 2.8E-17 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS13385 5c10d6327e8d4baa602a78ccbffb5af5 195 Gene3D G3DSA:1.10.3430.10 24 93 8.7E-4 T 22-04-2016 IPR029020 Ammonium/urea transporter TMO_RS03445 cc8480a56bc8917ef0385dbd6057b2c1 197 Pfam PF09335 SNARE associated Golgi protein 30 160 2.2E-23 T 22-04-2016 IPR032816 SNARE associated Golgi protein TMO_RS03445 cc8480a56bc8917ef0385dbd6057b2c1 197 PANTHER PTHR30353 1 196 1.4E-69 T 22-04-2016 IPR032818 DedA family TMO_RS03445 cc8480a56bc8917ef0385dbd6057b2c1 197 PANTHER PTHR30353:SF13 1 196 1.4E-69 T 22-04-2016 TMO_RS00630 92085a63c590db000d4d88b3fa3284a3 65 Pfam PF04588 Hypoxia induced protein conserved region 8 58 1.8E-12 T 22-04-2016 IPR007667 Hypoxia induced protein, domain TMO_RS02855 ee5454d27df9d189e8f89e33b5075855 195 SUPERFAMILY SSF52540 10 98 1.7E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS02855 ee5454d27df9d189e8f89e33b5075855 195 Pfam PF13521 AAA domain 10 155 1.0E-19 T 22-04-2016 TMO_RS02855 ee5454d27df9d189e8f89e33b5075855 195 Gene3D G3DSA:3.40.50.300 10 169 2.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS10930 f1e1afa3531c306c48e173b2b70562c4 134 Gene3D G3DSA:2.40.50.90 29 122 3.6E-8 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS10930 f1e1afa3531c306c48e173b2b70562c4 134 SUPERFAMILY SSF50199 28 124 4.18E-12 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold TMO_RS05285 a12500bb80856b9e05c3fd3cc7ddd5bd 172 PANTHER PTHR36919 33 170 9.3E-48 T 22-04-2016 TMO_RS05285 a12500bb80856b9e05c3fd3cc7ddd5bd 172 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 52 170 1.0E-29 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 TMO_RS05285 a12500bb80856b9e05c3fd3cc7ddd5bd 172 PANTHER PTHR36919:SF1 33 170 9.3E-48 T 22-04-2016 TMO_RS10935 97f8664188d9fda7c9bd63ef3b6a73d7 164 SUPERFAMILY SSF46785 36 130 8.78E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10935 97f8664188d9fda7c9bd63ef3b6a73d7 164 Gene3D G3DSA:1.10.10.10 94 142 9.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS10935 97f8664188d9fda7c9bd63ef3b6a73d7 164 Pfam PF13730 Helix-turn-helix domain 51 105 8.5E-10 T 22-04-2016 TMO_RS10935 97f8664188d9fda7c9bd63ef3b6a73d7 164 Gene3D G3DSA:1.10.10.10 37 93 1.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS11275 a89ee2c4cad2884a19a34407347223f8 71 Pfam PF00403 Heavy-metal-associated domain 3 60 3.7E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS11275 a89ee2c4cad2884a19a34407347223f8 71 Gene3D G3DSA:3.30.70.100 2 63 5.4E-19 T 22-04-2016 TMO_RS11275 a89ee2c4cad2884a19a34407347223f8 71 SUPERFAMILY SSF55008 2 66 4.06E-15 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 TMO_RS00830 1382ba02b0ceec8f99a0011e0430a3d3 327 Gene3D G3DSA:3.40.50.2300 161 291 2.0E-50 T 22-04-2016 TMO_RS00830 1382ba02b0ceec8f99a0011e0430a3d3 327 Gene3D G3DSA:3.40.50.2300 33 160 7.1E-60 T 22-04-2016 TMO_RS00830 1382ba02b0ceec8f99a0011e0430a3d3 327 PANTHER PTHR35271 2 327 2.1E-77 T 22-04-2016 TMO_RS00830 1382ba02b0ceec8f99a0011e0430a3d3 327 Pfam PF04392 ABC transporter substrate binding protein 34 325 3.2E-109 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein TMO_RS00830 1382ba02b0ceec8f99a0011e0430a3d3 327 SUPERFAMILY SSF53822 41 288 6.08E-21 T 22-04-2016 IPR028082 Periplasmic binding protein-like I TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 SUPERFAMILY SSF53474 19 272 5.27E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 4.9E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 137 150 4.9E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 123 136 4.9E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 Gene3D G3DSA:3.40.50.1820 22 273 3.4E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 PANTHER PTHR10992 22 274 1.2E-28 T 22-04-2016 TMO_RS16150 21dbf26bcc1d127a29b752eba34bfabd 280 Pfam PF00561 alpha/beta hydrolase fold 49 159 2.3E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 TMO_RS09365 16135b0c7eead785fe6a9d41926646bd 340 PANTHER PTHR30518:SF2 7 334 6.8E-83 T 22-04-2016 TMO_RS09365 16135b0c7eead785fe6a9d41926646bd 340 Pfam PF02618 YceG-like family 47 322 1.6E-78 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like TMO_RS09365 16135b0c7eead785fe6a9d41926646bd 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 146 325 1.0E-56 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like TMO_RS09365 16135b0c7eead785fe6a9d41926646bd 340 PANTHER PTHR30518 7 334 6.8E-83 T 22-04-2016 TMO_RS09365 16135b0c7eead785fe6a9d41926646bd 340 Gene3D G3DSA:3.30.160.60 295 331 1.3E-20 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 TMO_RS11100 e620eddd4ae739aeb8dd9e5af11380e0 81 SUPERFAMILY SSF47598 30 74 1.28E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 TMO_RS11100 e620eddd4ae739aeb8dd9e5af11380e0 81 Gene3D G3DSA:1.10.1220.10 30 70 3.4E-8 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 TMO_RS10710 4b6c857d509d700c6733e8f22eaff501 367 PANTHER PTHR33376 7 358 6.3E-23 T 22-04-2016 TMO_RS10710 4b6c857d509d700c6733e8f22eaff501 367 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 93 331 9.1E-23 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS01860 c7b13768c1875759e02f7016d4d44f37 164 Pfam PF06676 Protein of unknown function (DUF1178) 1 160 1.7E-54 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 TMO_RS01860 c7b13768c1875759e02f7016d4d44f37 164 PIRSF PIRSF032131 1 164 3.6E-44 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 TMO_RS03180 ac5bfae1bcc242f16ea2ee20f9585ce6 741 Pfam PF11739 Dicarboxylate transport 525 711 3.4E-35 T 22-04-2016 IPR021730 Dicarboxylate transport TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 SUPERFAMILY SSF53850 39 343 9.45E-56 T 22-04-2016 TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 PANTHER PTHR30222:SF5 25 336 4.1E-61 T 22-04-2016 TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 Gene3D G3DSA:3.40.190.10 163 331 4.3E-27 T 22-04-2016 TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 Gene3D G3DSA:3.40.190.10 61 162 8.6E-13 T 22-04-2016 TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 PANTHER PTHR30222 25 336 4.1E-61 T 22-04-2016 TMO_RS12755 ce339f6e98e31511f2021bc560bf46e7 391 Pfam PF13416 Bacterial extracellular solute-binding protein 63 336 2.9E-26 T 22-04-2016 TMO_RS14205 9d53bcf8ea688c59f7204cbe9a16f120 287 Gene3D G3DSA:3.20.20.70 5 286 3.9E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS14205 9d53bcf8ea688c59f7204cbe9a16f120 287 PANTHER PTHR37418 6 287 2.2E-35 T 22-04-2016 TMO_RS14205 9d53bcf8ea688c59f7204cbe9a16f120 287 Pfam PF05853 beta-keto acid cleavage enzyme 8 286 6.6E-65 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 TMO_RS29045 d9fb9dbd4357acb5311423b9aa087b9f 163 Pfam PF17200 Single Cache domain 2 66 149 2.8E-10 T 22-04-2016 IPR033480 Single Cache domain 2 TMO_RS29045 d9fb9dbd4357acb5311423b9aa087b9f 163 Gene3D G3DSA:3.30.450.20 36 156 6.3E-18 T 22-04-2016 TMO_RS29045 d9fb9dbd4357acb5311423b9aa087b9f 163 SMART SM01049 30 111 0.002 T 22-04-2016 IPR033480 Single Cache domain 2 TMO_RS12485 db18b9a3dd7f90c8c740509b81b8c4d4 186 PANTHER PTHR33932 1 176 3.5E-50 T 22-04-2016 TMO_RS12485 db18b9a3dd7f90c8c740509b81b8c4d4 186 Pfam PF13244 Domain of unknown function (DUF4040) 5 69 5.4E-17 T 22-04-2016 IPR025383 Domain of unknown function DUF4040 TMO_RS12485 db18b9a3dd7f90c8c740509b81b8c4d4 186 PANTHER PTHR33932:SF1 1 176 3.5E-50 T 22-04-2016 TMO_RS10750 512f245e5bd17a6beec6bbd5df75de70 306 PANTHER PTHR30482 1 304 1.0E-114 T 22-04-2016 TMO_RS10750 512f245e5bd17a6beec6bbd5df75de70 306 PANTHER PTHR30482:SF8 1 304 1.0E-114 T 22-04-2016 TMO_RS10750 512f245e5bd17a6beec6bbd5df75de70 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 22 282 3.3E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS06010 b008816eb813963fb59af16618372d28 308 PANTHER PTHR32196:SF33 16 307 5.3E-96 T 22-04-2016 TMO_RS06010 b008816eb813963fb59af16618372d28 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 17 290 9.7E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS06010 b008816eb813963fb59af16618372d28 308 PANTHER PTHR32196 16 307 5.3E-96 T 22-04-2016 TMO_RS08545 f9abb2166aa9fe974d47064c240f0c6f 238 SUPERFAMILY SSF56784 20 231 8.13E-40 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08545 f9abb2166aa9fe974d47064c240f0c6f 238 PANTHER PTHR18901 5 223 1.6E-31 T 22-04-2016 TMO_RS08545 f9abb2166aa9fe974d47064c240f0c6f 238 Gene3D G3DSA:3.40.50.1000 68 230 8.0E-28 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08545 f9abb2166aa9fe974d47064c240f0c6f 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 200 1.9E-26 T 22-04-2016 IPR023214 HAD-like domain TMO_RS08545 f9abb2166aa9fe974d47064c240f0c6f 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 111 196 2.1E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 TMO_RS00110 58794cf781a2cad12042d11a9e2d88a9 166 Pfam PF12692 S-adenosyl-L-methionine methyltransferase 2 160 8.0E-56 T 22-04-2016 IPR025690 Methyltransferase, putative TMO_RS04640 e2ba213fa23aaa5c4bb329b9661cec32 675 SUPERFAMILY SSF56112 63 278 1.39E-10 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS04640 e2ba213fa23aaa5c4bb329b9661cec32 675 Gene3D G3DSA:1.10.510.10 95 278 2.1E-5 T 22-04-2016 TMO_RS11055 e0da350b5df8887cfa6c97df5024a3bb 106 Pfam PF04956 TrbC/VIRB2 family 5 96 1.6E-26 T 22-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 TMO_RS11240 c0c812c52d79ece5f3a87dffb3038380 151 Gene3D G3DSA:3.40.50.9200 46 104 5.9E-6 T 22-04-2016 IPR015032 MTH538 TIR-like domain TMO_RS11240 c0c812c52d79ece5f3a87dffb3038380 151 SUPERFAMILY SSF52206 46 107 1.03E-7 T 22-04-2016 IPR015032 MTH538 TIR-like domain TMO_RS11240 c0c812c52d79ece5f3a87dffb3038380 151 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 6 112 4.2E-24 T 22-04-2016 IPR015032 MTH538 TIR-like domain TMO_RS23400 9b8491058f69ffd95c47c44016255747 81 PANTHER PTHR11922 1 50 8.1E-14 T 22-04-2016 TMO_RS23400 9b8491058f69ffd95c47c44016255747 81 Pfam PF00117 Glutamine amidotransferase class-I 1 49 6.3E-11 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 TMO_RS23400 9b8491058f69ffd95c47c44016255747 81 SUPERFAMILY SSF52317 1 52 1.11E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS23400 9b8491058f69ffd95c47c44016255747 81 Gene3D G3DSA:3.40.50.880 1 52 1.8E-15 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like TMO_RS25150 dbf15fbebd87d216dd0e4befa598641b 287 Pfam PF04230 Polysaccharide pyruvyl transferase 7 241 1.6E-16 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase TMO_RS23125 f54f39181df99924035b9e3e5a16c4cb 260 PANTHER PTHR11712 9 260 1.0E-13 T 22-04-2016 TMO_RS23125 f54f39181df99924035b9e3e5a16c4cb 260 Pfam PF14765 Polyketide synthase dehydratase 7 101 1.1E-21 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain TMO_RS05820 0652957f451cd49a8abf1fc595a8dd50 367 Pfam PF08007 Cupin superfamily protein 94 224 7.8E-21 T 22-04-2016 IPR003347 JmjC domain TMO_RS05820 0652957f451cd49a8abf1fc595a8dd50 367 Gene3D G3DSA:2.60.120.650 29 204 1.2E-20 T 22-04-2016 TMO_RS05820 0652957f451cd49a8abf1fc595a8dd50 367 SUPERFAMILY SSF51197 66 246 2.75E-27 T 22-04-2016 TMO_RS05820 0652957f451cd49a8abf1fc595a8dd50 367 PANTHER PTHR13096 74 205 4.6E-16 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 PANTHER PTHR30438 1 326 8.3E-71 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 SUPERFAMILY SSF111369 40 283 3.01E-14 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 Gene3D G3DSA:2.40.50.100 46 80 1.4E-11 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 Gene3D G3DSA:2.40.50.100 183 214 1.4E-11 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 PANTHER PTHR30438:SF1 1 326 8.3E-71 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 Pfam PF13533 Biotin-lipoyl like 46 93 2.9E-9 T 22-04-2016 TMO_RS17520 1d9d109fff24e3c50b4866737cc58288 326 Pfam PF13437 HlyD family secretion protein 185 291 1.2E-13 T 22-04-2016 TMO_RS11095 1101398512bbe4331c6bfe8fea3858af 154 Pfam PF11000 Protein of unknown function (DUF2840) 4 151 3.1E-74 T 22-04-2016 IPR021263 Protein of unknown function DUF2840 TMO_RS17880 84b39bc09b5b600e438a206fb47388a6 142 Pfam PF06347 Bacterial SH3 domain 18 73 5.0E-19 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 TMO_RS17880 84b39bc09b5b600e438a206fb47388a6 142 Pfam PF06347 Bacterial SH3 domain 86 134 1.1E-9 T 22-04-2016 IPR010466 Protein of unknown function DUF1058 TMO_RS03905 16fd8f4f079eae6c694d9590be8ca951 106 Pfam PF16083 LydA holin phage, holin superfamily III 21 96 3.8E-15 T 22-04-2016 IPR032126 LydA-like holin TMO_RS11930 0f7fd104c10461dfcd40ddb5c4781ef6 2215 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 451 524 1.1E-20 T 22-04-2016 IPR013491 Caudovirus, tape measure, N-terminal TMO_RS16575 9b05deeb157f3ed24b71a8385010e502 226 Pfam PF04230 Polysaccharide pyruvyl transferase 51 161 2.9E-10 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase TMO_RS13615 49555d5fcdaa192363944fc931568aee 489 Pfam PF03929 PepSY-associated TM region 22 372 1.7E-40 T 22-04-2016 IPR005625 PepSY-associated TM protein TMO_RS13615 49555d5fcdaa192363944fc931568aee 489 PANTHER PTHR34219:SF3 12 378 9.1E-52 T 22-04-2016 TMO_RS13615 49555d5fcdaa192363944fc931568aee 489 PANTHER PTHR34219 12 378 9.1E-52 T 22-04-2016 TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 SUPERFAMILY SSF52833 12 201 1.31E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 Gene3D G3DSA:3.40.30.10 15 165 1.2E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 PANTHER PTHR10681 16 194 1.6E-58 T 22-04-2016 TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 PIRSF PIRSF000239 8 210 4.1E-66 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 194 2.9E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 Gene3D G3DSA:3.30.1020.10 166 216 5.9E-15 T 22-04-2016 TMO_RS07470 5b9e310e669a0871fd1b81cfeda070c2 222 Pfam PF00578 AhpC/TSA family 16 143 6.2E-30 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 TMO_RS19425 79925aa1802a666fc3c95c90f5cf4118 70 SUPERFAMILY SSF52540 2 70 1.88E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS19425 79925aa1802a666fc3c95c90f5cf4118 70 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 18 31 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 TMO_RS19425 79925aa1802a666fc3c95c90f5cf4118 70 Pfam PF00158 Sigma-54 interaction domain 2 70 2.6E-25 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 TMO_RS19425 79925aa1802a666fc3c95c90f5cf4118 70 Gene3D G3DSA:3.40.50.300 1 61 1.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS19425 79925aa1802a666fc3c95c90f5cf4118 70 PANTHER PTHR32071 1 70 9.6E-36 T 22-04-2016 TMO_RS11180 df62bb9151a3ef7de679e993aaac2ae6 312 Pfam PF10686 Protein of unknown function (DUF2493) 194 260 8.7E-30 T 22-04-2016 IPR019627 Mycobacteriophage D29, Gp61 TMO_RS14275 c42ada2cd444c4307a421b293e41f711 243 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 52 136 1.0E-12 T 22-04-2016 IPR007172 Domain of unknown function DUF374 TMO_RS14275 c42ada2cd444c4307a421b293e41f711 243 Pfam PF04028 Domain of unknown function (DUF374) 69 136 1.8E-26 T 22-04-2016 IPR007172 Domain of unknown function DUF374 TMO_RS02600 f9ecc3d88ed09423b834914acd2bfeea 176 Pfam PF03073 TspO/MBR family 28 159 4.1E-44 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 TMO_RS02600 f9ecc3d88ed09423b834914acd2bfeea 176 PANTHER PTHR10057 23 158 1.9E-44 T 22-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 TMO_RS10875 ea01026aa98387d5afaa0889137d7097 298 Gene3D G3DSA:3.20.20.70 4 297 4.6E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS10875 ea01026aa98387d5afaa0889137d7097 298 Pfam PF05853 beta-keto acid cleavage enzyme 8 296 2.0E-59 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 TMO_RS10875 ea01026aa98387d5afaa0889137d7097 298 PANTHER PTHR37418 6 298 9.7E-27 T 22-04-2016 TMO_RS02110 d6292db17ab7ce519461d3697e9c534e 204 Pfam PF07885 Ion channel 76 146 7.4E-13 T 22-04-2016 IPR013099 Potassium channel domain TMO_RS02110 d6292db17ab7ce519461d3697e9c534e 204 Gene3D G3DSA:1.10.287.70 58 155 2.1E-12 T 22-04-2016 TMO_RS02110 d6292db17ab7ce519461d3697e9c534e 204 SUPERFAMILY SSF81324 54 175 1.01E-17 T 22-04-2016 TMO_RS03120 9d202dbf5ce06dbe612fe86720a736c1 219 PANTHER PTHR30086 4 219 4.8E-28 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS03120 9d202dbf5ce06dbe612fe86720a736c1 219 Pfam PF01810 LysE type translocator 18 216 5.4E-25 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 TMO_RS01305 d1635fd9bff249ef01eef15c3fa65c5e 142 PANTHER PTHR35813:SF1 15 141 2.7E-23 T 22-04-2016 TMO_RS01305 d1635fd9bff249ef01eef15c3fa65c5e 142 Pfam PF04304 Protein of unknown function (DUF454) 29 140 2.3E-34 T 22-04-2016 IPR007401 Protein of unknown function DUF454 TMO_RS01305 d1635fd9bff249ef01eef15c3fa65c5e 142 PANTHER PTHR35813 15 141 2.7E-23 T 22-04-2016 TMO_RS02345 ef370c7e0364da2b1d9a727e076509ed 146 Gene3D G3DSA:1.10.490.10 21 126 9.1E-16 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 TMO_RS02345 ef370c7e0364da2b1d9a727e076509ed 146 SUPERFAMILY SSF46458 21 127 1.58E-21 T 22-04-2016 IPR009050 Globin-like TMO_RS00425 0ab5528cc4e26df82a6c6ba2b123b2ec 465 Gene3D G3DSA:1.25.40.10 90 287 3.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS00425 0ab5528cc4e26df82a6c6ba2b123b2ec 465 Pfam PF07219 HemY protein N-terminus 26 131 2.6E-26 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 TMO_RS00425 0ab5528cc4e26df82a6c6ba2b123b2ec 465 SUPERFAMILY SSF48452 89 209 2.85E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05085 b33ce7991570defa003bd829b3f59acb 82 Pfam PF09851 Short C-terminal domain 53 80 2.0E-7 T 22-04-2016 IPR018649 SHOCT domain TMO_RS03075 e51980c51f8d3bda5716eb592dc54a2e 155 PANTHER PTHR11803:SF2 1 154 3.2E-49 T 22-04-2016 TMO_RS03075 e51980c51f8d3bda5716eb592dc54a2e 155 PANTHER PTHR11803 1 154 3.2E-49 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family TMO_RS03075 e51980c51f8d3bda5716eb592dc54a2e 155 Gene3D G3DSA:3.30.1330.40 3 154 1.0E-64 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS03075 e51980c51f8d3bda5716eb592dc54a2e 155 SUPERFAMILY SSF55298 4 154 4.4E-56 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS03075 e51980c51f8d3bda5716eb592dc54a2e 155 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 154 1.2E-38 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 PANTHER PTHR23546:SF1 8 416 1.9E-21 T 22-04-2016 TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 Pfam PF07690 Major Facilitator Superfamily 32 379 3.2E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 Gene3D G3DSA:1.20.1250.20 243 410 6.6E-6 T 22-04-2016 TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 SUPERFAMILY SSF103473 23 412 5.75E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 Gene3D G3DSA:1.20.1250.20 26 207 3.7E-24 T 22-04-2016 TMO_RS02455 52500d2d15a0ad0b17bbdea76c5f68ae 416 PANTHER PTHR23546 8 416 1.9E-21 T 22-04-2016 TMO_RS09215 678a344cbf5160103249cf6ca2575d4b 90 Gene3D G3DSA:3.90.330.10 20 78 3.4E-8 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS09215 678a344cbf5160103249cf6ca2575d4b 90 SUPERFAMILY SSF56209 4 82 1.12E-15 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 TMO_RS09215 678a344cbf5160103249cf6ca2575d4b 90 TIGRFAM TIGR03793 TOMM_pelo: NHLP leader peptide domain 4 79 2.1E-19 T 22-04-2016 IPR022513 Thiazole/oxazole-modified microcins TMO_RS10020 2a4f208529214cf1a708d12a238d9922 200 SUPERFAMILY SSF56219 1 199 7.2E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase TMO_RS29860 ba10c25aa1aa8351747f6ea48ed2461a 391 PANTHER PTHR30336:SF1 235 391 1.2E-16 T 22-04-2016 TMO_RS29860 ba10c25aa1aa8351747f6ea48ed2461a 391 Pfam PF02698 DUF218 domain 280 383 9.0E-9 T 22-04-2016 IPR003848 Domain of unknown function DUF218 TMO_RS29860 ba10c25aa1aa8351747f6ea48ed2461a 391 Gene3D G3DSA:3.40.50.620 343 389 1.1E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold TMO_RS29860 ba10c25aa1aa8351747f6ea48ed2461a 391 PANTHER PTHR30336 235 391 1.2E-16 T 22-04-2016 TMO_RS05500 774176280e4ed8530211d8dc368620df 142 Pfam PF10768 Class II flagellar assembly regulator 1 138 2.1E-40 T 22-04-2016 IPR019704 Flagellar assembly regulator FliX, class II TMO_RS10115 47a3c9fa7fff8a67671c2b28be523fa0 335 PANTHER PTHR11795 105 330 2.5E-114 T 22-04-2016 TMO_RS10115 47a3c9fa7fff8a67671c2b28be523fa0 335 PANTHER PTHR11795 24 89 2.5E-114 T 22-04-2016 TMO_RS10115 47a3c9fa7fff8a67671c2b28be523fa0 335 PANTHER PTHR11795:SF381 105 330 2.5E-114 T 22-04-2016 TMO_RS10115 47a3c9fa7fff8a67671c2b28be523fa0 335 PANTHER PTHR11795:SF381 24 89 2.5E-114 T 22-04-2016 TMO_RS10115 47a3c9fa7fff8a67671c2b28be523fa0 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 321 1.6E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS03625 6d05e09878003c53f15db41e7c5602b2 267 Pfam PF02706 Chain length determinant protein 2 154 1.0E-4 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 TMO_RS03160 19bbfda7e238b0271762586dd0d3ada8 69 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 2.4E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain TMO_RS29485 8fb3aa173b077e76dc0d5186f078dcd0 182 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 163 2.6E-18 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS29485 8fb3aa173b077e76dc0d5186f078dcd0 182 PANTHER PTHR35011 7 178 1.9E-12 T 22-04-2016 TMO_RS05775 c3b421f60808e749c935235b87257864 335 PANTHER PTHR32196:SF21 14 330 1.4E-74 T 22-04-2016 TMO_RS05775 c3b421f60808e749c935235b87257864 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 46 321 3.2E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS05775 c3b421f60808e749c935235b87257864 335 PANTHER PTHR32196 14 330 1.4E-74 T 22-04-2016 TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 PANTHER PTHR30332 220 531 4.4E-40 T 22-04-2016 TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 519 533 3.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 283 293 3.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 496 514 3.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 PRINTS PR00811 Bacterial general secretion pathway protein D signature 345 369 3.3E-12 T 22-04-2016 IPR001775 GspD/PilQ family TMO_RS09660 0a74415c5ec650b4edf20f4c61f6a321 590 Pfam PF00263 Bacterial type II and III secretion system protein 353 531 1.3E-32 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 TMO_RS03755 77e2faf0c8805596dcb2b397dee15a96 160 Pfam PF07617 Protein of unknown function (DUF1579) 5 157 1.2E-56 T 22-04-2016 IPR011473 Protein of unknown function DUF1579 TMO_RS14700 3cbc8eb4a1fca3d09bd3da890d28cf2a 412 Pfam PF06224 Winged helix DNA-binding domain 45 384 1.3E-81 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 TMO_RS14700 3cbc8eb4a1fca3d09bd3da890d28cf2a 412 PANTHER PTHR30528 9 411 1.2E-96 T 22-04-2016 TMO_RS00025 f48226265ae195a7eef1ff8d1410f581 69 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 41 9.7E-6 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 TMO_RS13745 bc0dcfb2fe8315267f219d1af3ad3667 281 PANTHER PTHR30465 16 279 3.1E-99 T 22-04-2016 TMO_RS13745 bc0dcfb2fe8315267f219d1af3ad3667 281 Gene3D G3DSA:1.10.3720.10 70 275 1.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13745 bc0dcfb2fe8315267f219d1af3ad3667 281 SUPERFAMILY SSF161098 74 262 3.01E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS13745 bc0dcfb2fe8315267f219d1af3ad3667 281 PANTHER PTHR30465:SF2 16 279 3.1E-99 T 22-04-2016 TMO_RS13745 bc0dcfb2fe8315267f219d1af3ad3667 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 275 5.5E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 TMO_RS06870 c6dbad8ecb418d7aa183b586ddc62bc0 425 Pfam PF09375 Imelysin 43 397 5.2E-94 T 22-04-2016 TMO_RS15865 223dd63a94fcbd6ab7a21bf4d86b84d7 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 326 97.026 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 TMO_RS15865 223dd63a94fcbd6ab7a21bf4d86b84d7 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 12 275 1.4E-58 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 TMO_RS15865 223dd63a94fcbd6ab7a21bf4d86b84d7 326 PANTHER PTHR34308 1 321 5.8E-93 T 22-04-2016 TMO_RS15865 223dd63a94fcbd6ab7a21bf4d86b84d7 326 Pfam PF03186 CobD/Cbib protein 14 307 2.5E-96 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 TMO_RS15865 223dd63a94fcbd6ab7a21bf4d86b84d7 326 PANTHER PTHR34308:SF1 1 321 5.8E-93 T 22-04-2016 TMO_RS14080 d3752711f17971057e27e0f28f79cb9a 326 Pfam PF02401 LytB protein 19 297 4.2E-87 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 TMO_RS14080 d3752711f17971057e27e0f28f79cb9a 326 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 17 302 35.612 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 TMO_RS14080 d3752711f17971057e27e0f28f79cb9a 326 PANTHER PTHR30426 17 325 6.6E-135 T 22-04-2016 TMO_RS14080 d3752711f17971057e27e0f28f79cb9a 326 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 18 300 5.3E-95 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 TMO_RS29210 6f641e7372c5e5f76d238ca05eeac821 616 Gene3D G3DSA:3.40.50.740 377 521 1.1E-11 T 22-04-2016 TMO_RS29210 6f641e7372c5e5f76d238ca05eeac821 616 SUPERFAMILY SSF53706 107 528 1.45E-27 T 22-04-2016 TMO_RS29210 6f641e7372c5e5f76d238ca05eeac821 616 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 31 69 7.4E-11 T 22-04-2016 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain TMO_RS13815 d906f23677ef2c776c0dfd14c8707c6b 381 Gene3D G3DSA:3.40.50.720 164 345 9.8E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS13815 d906f23677ef2c776c0dfd14c8707c6b 381 SUPERFAMILY SSF51735 156 267 1.04E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain TMO_RS03230 839af696d80e77d857a0547cf81ae39e 439 PANTHER PTHR30482 1 363 1.6E-58 T 22-04-2016 TMO_RS03230 839af696d80e77d857a0547cf81ae39e 439 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 323 4.6E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS29295 87cf202fcd37a2da4416733c7a1744bd 205 Pfam PF02620 Uncharacterized ACR, COG1399 72 191 6.9E-5 T 22-04-2016 IPR003772 Protein of unknown function DUF177 TMO_RS13040 6edcf749f397972a6e1bff673650cc47 159 Pfam PF10722 Putative bacterial sensory transduction regulator 42 155 5.5E-20 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN TMO_RS00355 b5894e5ae4133485dfee76c7cd228143 139 Pfam PF14354 Restriction alleviation protein Lar 7 64 1.3E-9 T 22-04-2016 TMO_RS07450 872c57ef15e47344c93d94f1a7035bb2 91 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 78 3.7E-10 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 TMO_RS07450 872c57ef15e47344c93d94f1a7035bb2 91 TIGRFAM TIGR02229 caa3_sub_IV: caa(3)-type oxidase, subunit IV 6 88 1.4E-20 T 22-04-2016 IPR011743 Caa(3)-type oxidase, subunit IV TMO_RS08645 ab6c9515b78c1ddad0ac5e9c827733d2 327 Gene3D G3DSA:1.10.101.10 17 70 1.7E-4 T 22-04-2016 IPR002477 Peptidoglycan binding-like TMO_RS03855 456c69378010ab60ed1b4c198a843a4e 171 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 19 158 1.8E-12 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TMO_RS03855 456c69378010ab60ed1b4c198a843a4e 171 Pfam PF04093 rod shape-determining protein MreD 17 129 3.8E-10 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 TMO_RS10005 81d1fa8f929f00e3f13a5412b11a88c7 491 PANTHER PTHR28641 62 491 1.2E-148 T 22-04-2016 TMO_RS10005 81d1fa8f929f00e3f13a5412b11a88c7 491 Pfam PF05292 Malonyl-CoA decarboxylase (MCD) 113 462 2.5E-137 T 22-04-2016 IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|UniPathway: UPA00340 TMO_RS12555 ba86fc4c80a7e9ffc669771d93b67864 228 Gene3D G3DSA:1.10.357.10 35 203 8.5E-12 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 TMO_RS12555 ba86fc4c80a7e9ffc669771d93b67864 228 SUPERFAMILY SSF46689 43 95 3.41E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 TMO_RS29570 397498a8abed311e748b317aa616ef6c 124 Pfam PF06305 Protein of unknown function (DUF1049) 24 87 3.5E-11 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 TMO_RS08035 af3dfc506c2a41bd8abcf02633adadc0 207 Pfam PF01618 MotA/TolQ/ExbB proton channel family 105 190 2.6E-8 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 TMO_RS02575 b63781bee640e09c5c80c56eece02a96 218 Pfam PF06055 Exopolysaccharide synthesis, ExoD 22 199 3.9E-59 T 22-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD TMO_RS02575 b63781bee640e09c5c80c56eece02a96 218 PIRSF PIRSF033239 9 214 1.1E-64 T 22-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD TMO_RS02575 b63781bee640e09c5c80c56eece02a96 218 PANTHER PTHR41795 17 208 5.8E-35 T 22-04-2016 TMO_RS29135 e8b16c78db136c760a74ed4363ac1308 152 Pfam PF04347 Flagellar biosynthesis protein, FliO 27 100 4.9E-9 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 TMO_RS07695 39e4a5b89a4236fa788fe00abc162a26 249 Pfam PF03741 Integral membrane protein TerC family 15 205 1.8E-46 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 TMO_RS07695 39e4a5b89a4236fa788fe00abc162a26 249 PANTHER PTHR30060:SF1 1 246 5.8E-101 T 22-04-2016 TMO_RS07695 39e4a5b89a4236fa788fe00abc162a26 249 PANTHER PTHR30060 1 246 5.8E-101 T 22-04-2016 TMO_RS14560 6794b230e4870d03b4dd883ba95e59de 184 Pfam PF11233 Protein of unknown function (DUF3035) 16 163 3.7E-48 T 22-04-2016 IPR021395 Protein of unknown function DUF3035 TMO_RS16435 1b6b5c48b6d44dee026cb9486887c921 186 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 159 3.1E-15 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS11795 1f80c5db7044049b93027096c19f6dc3 264 SUPERFAMILY SSF53187 4 263 1.19E-75 T 22-04-2016 TMO_RS11795 1f80c5db7044049b93027096c19f6dc3 264 Pfam PF05013 N-formylglutamate amidohydrolase 13 234 1.1E-64 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase TMO_RS11795 1f80c5db7044049b93027096c19f6dc3 264 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 4 262 8.0E-101 T 22-04-2016 IPR010247 N-formylglutamate deformylase TMO_RS11795 1f80c5db7044049b93027096c19f6dc3 264 Gene3D G3DSA:3.40.630.40 3 262 1.0E-84 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 TMO_RS12330 c0ea872bcc5b433062d356630f53df07 312 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 44 262 1.9E-61 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_RS12330 c0ea872bcc5b433062d356630f53df07 312 SUPERFAMILY SSF69796 37 271 2.09E-65 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_RS12330 c0ea872bcc5b433062d356630f53df07 312 Pfam PF02511 Thymidylate synthase complementing protein 46 256 5.9E-54 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_RS12330 c0ea872bcc5b433062d356630f53df07 312 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 40 270 28.072 T 22-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 TMO_RS12330 c0ea872bcc5b433062d356630f53df07 312 PANTHER PTHR34934 38 305 4.7E-45 T 22-04-2016 TMO_RS05005 3780f17e70b43cc847de6cfd503706e0 368 Pfam PF06674 Protein of unknown function (DUF1176) 40 362 3.8E-85 T 22-04-2016 IPR009560 Protein of unknown function DUF1176 TMO_RS08340 28fd9c3dc9a120622aca5f3c500c245b 130 Gene3D G3DSA:3.30.1460.30 9 110 8.6E-33 T 22-04-2016 IPR007076 TfoX, N-terminal TMO_RS08340 28fd9c3dc9a120622aca5f3c500c245b 130 SUPERFAMILY SSF159894 14 110 5.23E-27 T 22-04-2016 TMO_RS08340 28fd9c3dc9a120622aca5f3c500c245b 130 Pfam PF04993 TfoX N-terminal domain 17 109 2.5E-28 T 22-04-2016 IPR007076 TfoX, N-terminal TMO_RS12015 cee87fce956c722d9cfa7118e3b92088 72 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 29 65 7.3E-12 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 TMO_RS12015 cee87fce956c722d9cfa7118e3b92088 72 SUPERFAMILY SSF57716 34 66 7.41E-6 T 22-04-2016 TMO_RS12840 e8fe98379db379f04a35e22df7d6c945 332 Gene3D G3DSA:3.20.20.210 79 325 4.0E-6 T 22-04-2016 TMO_RS12840 e8fe98379db379f04a35e22df7d6c945 332 SUPERFAMILY SSF51726 32 329 3.84E-12 T 22-04-2016 TMO_RS00610 5e6bc4afcc93df50ea6d50f8c1c68c27 168 PANTHER PTHR30087 4 164 1.6E-51 T 22-04-2016 TMO_RS00610 5e6bc4afcc93df50ea6d50f8c1c68c27 168 PANTHER PTHR30087:SF1 4 164 1.6E-51 T 22-04-2016 TMO_RS00610 5e6bc4afcc93df50ea6d50f8c1c68c27 168 Pfam PF04463 Protein of unknown function (DUF523) 15 151 6.8E-41 T 22-04-2016 IPR007553 Domain of unknown function DUF523 TMO_RS03640 ef78b792cc6fa0c7677f4bac75b52c7f 131 Pfam PF13358 DDE superfamily endonuclease 1 101 6.6E-15 T 22-04-2016 TMO_RS29245 9c519c25439ac3017dc43d8d07a246a1 113 Pfam PF06803 Protein of unknown function (DUF1232) 33 69 7.7E-13 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 TMO_RS09175 270604be2e6d335287cd0b779d197197 158 PANTHER PTHR30455 2 156 4.6E-65 T 22-04-2016 TMO_RS09175 270604be2e6d335287cd0b779d197197 158 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.1E-51 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TMO_RS09175 270604be2e6d335287cd0b779d197197 158 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 83.88 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 TMO_RS09175 270604be2e6d335287cd0b779d197197 158 PANTHER PTHR30455:SF2 2 156 4.6E-65 T 22-04-2016 TMO_RS09175 270604be2e6d335287cd0b779d197197 158 Pfam PF03477 ATP cone domain 50 136 6.0E-18 T 22-04-2016 IPR005144 ATP-cone domain TMO_RS05090 18a961065ee3b3457c32df21b5fa3950 183 SUPERFAMILY SSF75708 28 183 1.57E-30 T 22-04-2016 TMO_RS05090 18a961065ee3b3457c32df21b5fa3950 183 Pfam PF04344 Chemotaxis phosphatase, CheZ 108 182 1.1E-8 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- TMO_RS05090 18a961065ee3b3457c32df21b5fa3950 183 Gene3D G3DSA:1.10.287.500 101 139 5.4E-9 T 22-04-2016 TMO_RS05090 18a961065ee3b3457c32df21b5fa3950 183 Gene3D G3DSA:1.10.287.500 42 93 4.2E-5 T 22-04-2016 TMO_RS11185 fc3b2c147be0bf65e0beab5c2e1b0f78 344 Pfam PF13362 Toprim domain 230 319 2.4E-23 T 22-04-2016 IPR006171 Toprim domain TMO_RS11185 fc3b2c147be0bf65e0beab5c2e1b0f78 344 Gene3D G3DSA:3.40.1360.10 250 326 3.3E-5 T 22-04-2016 TMO_RS06385 2355c18b81b85f3788991f22a42c6bdc 408 Pfam PF13353 4Fe-4S single cluster domain 115 200 8.2E-5 T 22-04-2016 TMO_RS06385 2355c18b81b85f3788991f22a42c6bdc 408 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 89 378 2.3E-112 T 22-04-2016 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC TMO_RS06385 2355c18b81b85f3788991f22a42c6bdc 408 Gene3D G3DSA:3.20.20.70 118 339 2.6E-23 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 TMO_RS06385 2355c18b81b85f3788991f22a42c6bdc 408 SUPERFAMILY SSF102114 117 374 5.3E-22 T 22-04-2016 TMO_RS15725 eefa4197d1f7fe14c6129963dcaf44f5 160 Pfam PF08808 RES domain 12 145 1.6E-20 T 22-04-2016 IPR014914 RES domain TMO_RS15725 eefa4197d1f7fe14c6129963dcaf44f5 160 SMART SM00953 24 147 3.5E-18 T 22-04-2016 IPR014914 RES domain TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 SUPERFAMILY SSF48452 307 332 2.47E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 SUPERFAMILY SSF48452 749 792 2.47E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 SUPERFAMILY SSF48452 396 433 2.47E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 SUPERFAMILY SSF48452 660 696 2.47E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 Gene3D G3DSA:1.25.40.10 660 775 4.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 Gene3D G3DSA:1.25.40.10 402 433 4.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 Gene3D G3DSA:1.25.40.10 301 352 4.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS05445 7800977c64f02194d0ff48b68f90b1a3 814 Gene3D G3DSA:1.25.40.10 186 217 4.5E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS29240 87afb9530f16f931778b000a9c227d4a 337 Gene3D G3DSA:3.90.850.10 76 326 2.9E-40 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS29240 87afb9530f16f931778b000a9c227d4a 337 SUPERFAMILY SSF56529 80 325 1.72E-33 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 TMO_RS29240 87afb9530f16f931778b000a9c227d4a 337 PANTHER PTHR30143 62 326 5.1E-22 T 22-04-2016 TMO_RS06355 33f4a0c017a95edbc7e8269c3c5b4ee3 153 PANTHER PTHR30574:SF1 10 137 2.1E-32 T 22-04-2016 TMO_RS06355 33f4a0c017a95edbc7e8269c3c5b4ee3 153 PANTHER PTHR30574 10 137 2.1E-32 T 22-04-2016 TMO_RS06190 52e6a41d7589f07a91cb084777c90758 146 Pfam PF02050 Flagellar FliJ protein 19 134 3.5E-11 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 TMO_RS06140 59b2e785e5aad28bea5e0cabd7eb8643 369 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 100 360 2.2E-68 T 22-04-2016 IPR019285 Protein of unknown function DUF2336 TMO_RS06140 59b2e785e5aad28bea5e0cabd7eb8643 369 PANTHER PTHR40253 1 365 1.8E-27 T 22-04-2016 TMO_RS11030 4d5e4ef1477e3668a63da16901558d9e 432 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 254 4.1E-56 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 TMO_RS11030 4d5e4ef1477e3668a63da16901558d9e 432 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 3 302 5.3E-70 T 22-04-2016 IPR014150 Conjugal transfer, TrbL TMO_RS13625 29c74e22c096296303c2b3e21705e8e7 326 PIRSF PIRSF018266 1 323 2.5E-79 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS13625 29c74e22c096296303c2b3e21705e8e7 326 PANTHER PTHR30273 1 326 9.8E-53 T 22-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component TMO_RS13625 29c74e22c096296303c2b3e21705e8e7 326 Pfam PF16220 Domain of unknown function (DUF4880) 8 49 2.1E-10 T 22-04-2016 IPR032623 FecR, N-terminal TMO_RS13625 29c74e22c096296303c2b3e21705e8e7 326 Pfam PF04773 FecR protein 118 209 5.8E-21 T 22-04-2016 IPR006860 FecR protein TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 10 42 7.85E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 74 125 7.85E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 257 287 7.85E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 170 226 7.85E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 SUPERFAMILY SSF52151 323 339 7.85E-14 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 Pfam PF01734 Patatin-like phospholipase 15 337 4.8E-13 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 Pfam PF11856 Protein of unknown function (DUF3376) 391 705 2.3E-15 T 22-04-2016 IPR024282 Domain of unknown function DUF3376 TMO_RS10400 365935c87f2b0e19630ba09a7da26ec8 753 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 9 426 3.2E-82 T 22-04-2016 IPR019894 Patatin-related protein TMO_RS03340 39c2b041a6efafbf80fe4d7162a94f26 191 PANTHER PTHR23091 19 185 5.9E-31 T 22-04-2016 TMO_RS03340 39c2b041a6efafbf80fe4d7162a94f26 191 SUPERFAMILY SSF55729 21 183 1.15E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS03340 39c2b041a6efafbf80fe4d7162a94f26 191 Pfam PF13420 Acetyltransferase (GNAT) domain 21 176 2.7E-24 T 22-04-2016 TMO_RS03340 39c2b041a6efafbf80fe4d7162a94f26 191 PANTHER PTHR23091:SF187 19 185 5.9E-31 T 22-04-2016 TMO_RS03340 39c2b041a6efafbf80fe4d7162a94f26 191 Gene3D G3DSA:3.40.630.30 18 186 2.3E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS10975 d1c134f51316e18c73942377f706eaf4 184 Gene3D G3DSA:1.20.1260.10 7 155 1.0E-22 T 22-04-2016 IPR012347 Ferritin-related TMO_RS10975 d1c134f51316e18c73942377f706eaf4 184 SUPERFAMILY SSF47240 15 159 1.08E-16 T 22-04-2016 IPR009078 Ferritin-like superfamily TMO_RS10975 d1c134f51316e18c73942377f706eaf4 184 Pfam PF00210 Ferritin-like domain 21 154 4.8E-7 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 TMO_RS03650 687d2e274ebf09c58c719a3419b8315c 149 Pfam PF00881 Nitroreductase family 42 127 4.8E-6 T 22-04-2016 IPR029479 Nitroreductase TMO_RS03650 687d2e274ebf09c58c719a3419b8315c 149 Gene3D G3DSA:3.40.109.10 1 148 4.8E-25 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS03650 687d2e274ebf09c58c719a3419b8315c 149 SUPERFAMILY SSF55469 1 148 6.54E-28 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 TMO_RS03650 687d2e274ebf09c58c719a3419b8315c 149 PANTHER PTHR23026 1 148 1.0E-16 T 22-04-2016 TMO_RS17360 4d1699ab0b4d83d60d5a6839f5e13ac1 144 Pfam PF10003 Integral membrane protein (DUF2244) 1 130 6.7E-37 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane TMO_RS17360 4d1699ab0b4d83d60d5a6839f5e13ac1 144 PIRSF PIRSF032162 1 138 4.3E-37 T 22-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane TMO_RS12950 756abf894ea518e2308107a37243c841 466 PANTHER PTHR10283 1 464 3.3E-18 T 22-04-2016 TMO_RS12950 756abf894ea518e2308107a37243c841 466 Pfam PF00939 Sodium:sulfate symporter transmembrane region 34 464 1.6E-23 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 TMO_RS16965 0fc6d973adc6af9a6030b8ca152e5298 304 Pfam PF05035 2-keto-3-deoxy-galactonokinase 10 293 2.7E-91 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 TMO_RS10705 9099e0c2fdd83108d03de673ab4e7cd3 181 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 37 168 3.3E-16 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS07460 d108662b6db3ca437209caf9b4867930 258 PANTHER PTHR30269:SF9 1 255 8.9E-49 T 22-04-2016 TMO_RS07460 d108662b6db3ca437209caf9b4867930 258 Pfam PF01925 Sulfite exporter TauE/SafE 8 246 1.2E-49 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS07460 d108662b6db3ca437209caf9b4867930 258 PANTHER PTHR30269 1 255 8.9E-49 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 TMO_RS25835 13fd9b4c1c2a94a4307190e58dedf15d 71 Pfam PF05170 AsmA family 3 65 2.2E-8 T 22-04-2016 IPR007844 AsmA TMO_RS06300 9c3df8e5a73f9100fbb7aee966fd17b4 1014 Pfam PF02120 Flagellar hook-length control protein FliK 853 916 2.1E-13 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal TMO_RS26515 4e180cd09ec8c3c1cbb41cb485e9adeb 246 SUPERFAMILY SSF53323 1 63 9.42E-7 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 TMO_RS07670 6cef0ca40a63090c64d0146cc74ee8b2 315 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 314 6.8E-99 T 22-04-2016 IPR007296 Domain of unknown function DUF403 TMO_RS07670 6cef0ca40a63090c64d0146cc74ee8b2 315 PANTHER PTHR34595 1 314 7.0E-106 T 22-04-2016 TMO_RS14155 a281c6047c850c12339fb4b4270ff035 135 Pfam PF06170 Protein of unknown function (DUF983) 34 118 1.5E-32 T 22-04-2016 IPR009325 Protein of unknown function DUF983 TMO_RS02840 b87a01973c04d74ccde19bb87a798d62 137 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 13 117 2.2E-25 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS02840 b87a01973c04d74ccde19bb87a798d62 137 PANTHER PTHR35011 1 128 1.0E-21 T 22-04-2016 TMO_RS06930 6f6df25ea771240d94a8700a516eba03 346 Gene3D G3DSA:3.90.1200.10 127 329 1.1E-29 T 22-04-2016 TMO_RS06930 6f6df25ea771240d94a8700a516eba03 346 SUPERFAMILY SSF56112 15 332 1.06E-57 T 22-04-2016 IPR011009 Protein kinase-like domain TMO_RS06930 6f6df25ea771240d94a8700a516eba03 346 Pfam PF01636 Phosphotransferase enzyme family 34 255 5.9E-50 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase TMO_RS00790 3069022541d3daa3bdd907c17fbc24b0 250 Pfam PF04402 Protein of unknown function (DUF541) 49 245 1.1E-24 T 22-04-2016 IPR007497 Protein of unknown function DUF541 TMO_RS12490 b9c3e8bfd14a054a53785f7c07a93ea2 140 PANTHER PTHR33932 1 140 9.6E-29 T 22-04-2016 TMO_RS12490 b9c3e8bfd14a054a53785f7c07a93ea2 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 129 1.4E-27 T 22-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein TMO_RS12490 b9c3e8bfd14a054a53785f7c07a93ea2 140 PANTHER PTHR33932:SF4 1 140 9.6E-29 T 22-04-2016 TMO_RS17710 ea1159e70a3cf61d971bb6b28eda1508 139 Pfam PF07681 DoxX 15 95 3.1E-14 T 22-04-2016 IPR032808 DoxX family TMO_RS12710 a372f62b34192c79135ad9eb920f0d2f 1010 Pfam PF13245 Part of AAA domain 344 404 2.1E-9 T 22-04-2016 TMO_RS12710 a372f62b34192c79135ad9eb920f0d2f 1010 Gene3D G3DSA:3.40.50.300 332 445 2.6E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS12710 a372f62b34192c79135ad9eb920f0d2f 1010 Pfam PF13195 Protein of unknown function (DUF4011) 39 221 4.0E-44 T 22-04-2016 IPR025103 Protein of unknown function DUF4011 TMO_RS12710 a372f62b34192c79135ad9eb920f0d2f 1010 SUPERFAMILY SSF52540 332 414 1.35E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase TMO_RS04040 76ad490285188560b23c281b1afaddd9 207 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 15 192 2.8E-77 T 22-04-2016 IPR018715 Protein of unknown function DUF2239 TMO_RS03235 7d64f664c5a531025fb23696915a29bc 316 PANTHER PTHR11795 290 314 1.0E-66 T 22-04-2016 TMO_RS03235 7d64f664c5a531025fb23696915a29bc 316 PANTHER PTHR11795 2 262 1.0E-66 T 22-04-2016 TMO_RS03235 7d64f664c5a531025fb23696915a29bc 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 272 7.8E-29 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS03235 7d64f664c5a531025fb23696915a29bc 316 PANTHER PTHR11795:SF379 290 314 1.0E-66 T 22-04-2016 TMO_RS03235 7d64f664c5a531025fb23696915a29bc 316 PANTHER PTHR11795:SF379 2 262 1.0E-66 T 22-04-2016 TMO_RS08740 56254e26b2607ae14b832bef5c1101ce 458 Pfam PF01943 Polysaccharide biosynthesis protein 34 298 1.2E-12 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 TMO_RS01545 b7d1a4e066060aca7c71b1538779bfc7 166 Pfam PF10722 Putative bacterial sensory transduction regulator 15 143 1.0E-30 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN TMO_RS04785 7a0d00aaea1d2959220519bd5daff512 133 Pfam PF04241 Protein of unknown function (DUF423) 19 112 9.9E-18 T 22-04-2016 IPR006696 Protein of unknown function DUF423 TMO_RS09190 6cef8ea03652a0267f2876cf0b465c6f 157 Pfam PF05443 ROS/MUCR transcriptional regulator protein 15 140 1.2E-51 T 22-04-2016 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 TMO_RS00375 37e73c1913a9fbea19c50af886ba3984 105 Gene3D G3DSA:1.10.10.10 9 60 6.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain TMO_RS28935 277dce2b90683493f733efd52bccaae7 128 Pfam PF13467 Ribbon-helix-helix domain 6 68 1.4E-22 T 22-04-2016 IPR027373 Ribbon-helix-helix domain TMO_RS22410 d5315e5e5f8bfaea9ff0a19f86d28fab 256 Pfam PF14907 Uncharacterised nucleotidyltransferase 33 255 1.8E-32 T 22-04-2016 TMO_RS13890 1095fafe8d43190024803217d145fb7d 192 PIRSF PIRSF032064 12 190 1.9E-31 T 22-04-2016 IPR010593 Protein of unknown function DUF1159 TMO_RS13890 1095fafe8d43190024803217d145fb7d 192 Pfam PF05258 Protein of unknown function (DUF721) 41 133 1.2E-15 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 TMO_RS11455 3fa067d89250a541f8f7a5759d0b3160 505 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 447 7.3E-127 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane TMO_RS11455 3fa067d89250a541f8f7a5759d0b3160 505 PANTHER PTHR35342 1 504 1.3E-152 T 22-04-2016 TMO_RS02980 baba632ea8a20c81920addbc09a6e4d7 279 Pfam PF09361 Phasin protein 170 265 9.2E-12 T 22-04-2016 IPR018968 Phasin TMO_RS04245 57038567b1958c3d2e091d0e9c8ab2cd 576 SUPERFAMILY SSF53649 303 496 2.43E-8 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 TMO_RS00690 7e3db49faddfd40da54d2f5d8145e038 295 Pfam PF02687 FtsX-like permease family 173 286 1.1E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 TMO_RS28930 892f90e614211e291b9f8433c25c321c 151 Pfam PF07310 PAS domain 14 145 3.5E-16 T 22-04-2016 IPR009922 Protein of unknown function DUF1457 TMO_RS07530 cff0bffe7bb6b41f83f2296b12b160d2 190 Pfam PF11188 Protein of unknown function (DUF2975) 72 186 4.1E-10 T 22-04-2016 IPR021354 Protein of unknown function DUF2975 TMO_RS01595 2bacdfc7073ae48c94d73c8a209b32e7 164 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 6 160 2.4E-63 T 22-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane TMO_RS10560 10c4731a4f28bf70d144a58b578393cc 312 Pfam PF06007 Phosphonate metabolism protein PhnJ 21 292 2.3E-144 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 TMO_RS10560 10c4731a4f28bf70d144a58b578393cc 312 PIRSF PIRSF011468 12 301 2.9E-158 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 TMO_RS24445 437d27282e9aec564117a1dc123e0e0b 131 Pfam PF09898 Uncharacterized protein conserved in bacteria (DUF2125) 7 127 7.5E-26 T 22-04-2016 IPR018666 Protein of unknown function DUF2125 TMO_RS15265 f59b344527551baf59f69270845287bf 291 Gene3D G3DSA:2.60.120.620 48 241 3.9E-14 T 22-04-2016 TMO_RS15265 f59b344527551baf59f69270845287bf 291 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 95 222 5.2E-8 T 22-04-2016 IPR008775 Phytanoyl-CoA dioxygenase TMO_RS15265 f59b344527551baf59f69270845287bf 291 SUPERFAMILY SSF51197 47 243 8.33E-19 T 22-04-2016 TMO_RS05645 a6ae567e1c525ce62478bd5099bbc66d 140 Pfam PF00460 Flagella basal body rod protein 7 24 2.1E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 TMO_RS05645 a6ae567e1c525ce62478bd5099bbc66d 140 PIRSF PIRSF002889 1 136 8.1E-17 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 TMO_RS05975 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 Pfam PF00149 Calcineurin-like phosphoesterase 1 201 4.7E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 TMO_RS05975 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 Gene3D G3DSA:3.60.21.10 1 251 1.7E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS05975 d9c3a3aaf7d6044167c92e47d6b5b8a8 281 SUPERFAMILY SSF56300 1 246 1.98E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like TMO_RS09060 b266e75684e71312df3c1ccf1f4a2118 156 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 155 7.7E-16 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component TMO_RS02095 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 Pfam PF05170 AsmA family 3 206 1.6E-23 T 22-04-2016 IPR007844 AsmA TMO_RS02095 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 Pfam PF05170 AsmA family 310 558 1.6E-26 T 22-04-2016 IPR007844 AsmA TMO_RS02095 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 PANTHER PTHR30441 1 135 3.1E-55 T 22-04-2016 TMO_RS02095 ba9b60ce0dc28fb10ae09fb9243bbfa7 660 PANTHER PTHR30441 151 658 3.1E-55 T 22-04-2016 TMO_RS10415 c8a7be98f49c5fb0ca31597abcb15446 180 Pfam PF12915 Protein of unknown function (DUF3833) 2 154 5.6E-63 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 TMO_RS09690 197889641c370dd34482a0dd3c0b739d 577 PANTHER PTHR35369:SF2 70 561 9.2E-70 T 22-04-2016 TMO_RS09690 197889641c370dd34482a0dd3c0b739d 577 Pfam PF00817 impB/mucB/samB family 50 175 5.8E-8 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 TMO_RS09690 197889641c370dd34482a0dd3c0b739d 577 SUPERFAMILY SSF56672 48 275 1.89E-22 T 22-04-2016 TMO_RS09690 197889641c370dd34482a0dd3c0b739d 577 PANTHER PTHR35369 70 561 9.2E-70 T 22-04-2016 TMO_RS12320 8a9095793cc0eda322115ea3f7aaa853 418 SUPERFAMILY SSF48208 217 368 1.09E-5 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 TMO_RS12320 8a9095793cc0eda322115ea3f7aaa853 418 SUPERFAMILY SSF48208 130 185 1.09E-5 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 TMO_RS12320 8a9095793cc0eda322115ea3f7aaa853 418 SUPERFAMILY SSF48208 67 100 1.09E-5 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 TMO_RS11820 f9bf431ce80b8f440e234d74be1d574f 483 Gene3D G3DSA:3.40.630.30 263 407 7.6E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS11820 f9bf431ce80b8f440e234d74be1d574f 483 SUPERFAMILY SSF55729 256 421 8.68E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase TMO_RS14835 fd2a0064f4cd36150a75c510306cf286 288 Pfam PF04632 Fusaric acid resistance protein family 4 260 2.2E-23 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 TMO_RS00540 fed78277fb8d318a0f27d46e39a0e96f 690 Pfam PF07940 Heparinase II/III-like protein 398 633 9.3E-46 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 TMO_RS16585 e2f3cdb9a870e7de17e9fc3c5f15a884 97 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 90 1.3E-9 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 TMO_RS17005 a7519c47f4112fc1d7b6958cd87bf91e 174 Pfam PF06114 Domain of unknown function (DUF955) 46 170 1.7E-20 T 22-04-2016 IPR010359 HTH domain, IrrE-type TMO_RS13775 1456ec5ee5d7a3c0de21f4e615510eda 516 Pfam PF04909 Amidohydrolase 141 334 4.4E-11 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 TMO_RS13775 1456ec5ee5d7a3c0de21f4e615510eda 516 SUPERFAMILY SSF51556 407 492 2.59E-40 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS13775 1456ec5ee5d7a3c0de21f4e615510eda 516 SUPERFAMILY SSF51556 36 65 2.59E-40 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS13775 1456ec5ee5d7a3c0de21f4e615510eda 516 SUPERFAMILY SSF51556 94 335 2.59E-40 T 22-04-2016 IPR032466 Metal-dependent hydrolase TMO_RS13775 1456ec5ee5d7a3c0de21f4e615510eda 516 Gene3D G3DSA:3.20.20.140 37 358 3.4E-39 T 22-04-2016 TMO_RS11065 2d255063b1f169de008e2f1e7fec3b5e 147 Gene3D G3DSA:1.20.120.330 10 135 8.1E-4 T 22-04-2016 TMO_RS04795 cd53c7ae5597904204c3d3ac6448e60d 392 Pfam PF05762 VWA domain containing CoxE-like protein 187 272 1.9E-7 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like TMO_RS17000 370e9f25631b98c9b4f04af4a3481165 150 Pfam PF11162 Protein of unknown function (DUF2946) 28 147 9.2E-7 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 TMO_RS15635 94a3aaab8920c43eb677282b86e38d78 189 SUPERFAMILY SSF88723 43 173 2.62E-12 T 22-04-2016 IPR029060 PIN domain-like TMO_RS06015 5061554135f2afe457839622bc58580b 372 Pfam PF02653 Branched-chain amino acid transport system / permease component 63 341 5.0E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 TMO_RS06015 5061554135f2afe457839622bc58580b 372 PANTHER PTHR32196 25 365 2.0E-64 T 22-04-2016 TMO_RS06015 5061554135f2afe457839622bc58580b 372 PANTHER PTHR32196:SF22 25 365 2.0E-64 T 22-04-2016 TMO_RS08760 65e46043f6d8a90f9e5758fb41248cd8 135 Pfam PF07310 PAS domain 2 109 3.1E-5 T 22-04-2016 IPR009922 Protein of unknown function DUF1457 TMO_RS07650 f3acad933900f5095ea88ce90a22c69c 83 Pfam PF13488 Glycine zipper 37 76 5.8E-6 T 22-04-2016 TMO_RS12040 c3e48ae9943e2b353418be7823f75229 197 Pfam PF06252 Protein of unknown function (DUF1018) 20 135 3.9E-29 T 22-04-2016 IPR009363 Bacteriophage Mu, Gp16 TMO_RS06365 073a51563326ec5bc653a56c20580766 66 Pfam PF11127 Protein of unknown function (DUF2892) 1 62 1.1E-22 T 22-04-2016 IPR021309 Protein of unknown function DUF2892 TMO_RS28955 53fcba27c708a3e8aa9fd8461cea6bcf 274 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 116 255 2.5E-20 T 22-04-2016 IPR019262 Domain of unknown function DUF2272 TMO_RS14020 d24ecb48bc71efefd2d999ff0309bbec 142 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 141 8.536 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS14020 d24ecb48bc71efefd2d999ff0309bbec 142 Pfam PF00430 ATP synthase B/B' CF(0) 13 141 4.5E-18 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 TMO_RS05155 13be686dc42232589d63a07ad4bd9158 70 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 64 1.1E-26 T 22-04-2016 IPR021074 Formate dehydrogenase, delta subunit TMO_RS09990 394d5f6a61c8239f0cd1b8274c0fba4a 502 SUPERFAMILY SSF51126 1 153 2.55E-8 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS09990 394d5f6a61c8239f0cd1b8274c0fba4a 502 SUPERFAMILY SSF51126 183 375 2.55E-8 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor TMO_RS09055 ae97d6c7ad069af4b76e5fe489eb23f1 368 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 130 263 1.5E-8 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 TMO_RS11110 6f8f01ebec09c5b5df28feab7a225fcd 357 Pfam PF10134 Replication initiator protein A 27 256 2.6E-93 T 22-04-2016 IPR018777 Replication initiator protein A TMO_RS14390 3b7ff40cddc853e258a179a3e1ad05e2 71 SUPERFAMILY SSF47413 7 58 1.13E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS14390 3b7ff40cddc853e258a179a3e1ad05e2 71 Gene3D G3DSA:1.10.260.40 8 57 2.0E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 TMO_RS14630 4cb046e5626677702e2d0a2fdb7ddbf0 262 Pfam PF10099 Anti-sigma-K factor rskA 68 255 1.0E-26 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 TMO_RS11140 d4c965e43f53d36371d5b0adf9707fd5 107 Pfam PF05284 Protein of unknown function (DUF736) 3 101 5.1E-36 T 22-04-2016 IPR007948 Protein of unknown function DUF736 TMO_RS11760 4cd01aacfce39c38d43f931272968318 200 Pfam PF02631 RecX family 54 171 7.6E-13 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 TMO_RS01365 5b97d7dc7aa4fa727aa35ab3e6d62709 141 Pfam PF06170 Protein of unknown function (DUF983) 52 134 1.3E-33 T 22-04-2016 IPR009325 Protein of unknown function DUF983 TMO_RS04295 2e36a124f67700e931cc3fad35ab282c 472 SUPERFAMILY SSF48452 172 285 3.99E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS04295 2e36a124f67700e931cc3fad35ab282c 472 SUPERFAMILY SSF48452 8 56 3.99E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS04295 2e36a124f67700e931cc3fad35ab282c 472 Gene3D G3DSA:1.25.40.10 169 287 3.8E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS04295 2e36a124f67700e931cc3fad35ab282c 472 Gene3D G3DSA:1.25.40.10 8 53 3.8E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 TMO_RS08495 0ac767347a046f0490ab1cf5060584f1 200 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 172 8.9E-54 T 22-04-2016 IPR018648 Protein of unknown function DUF2076 TMO_RS07375 68f094fc432b466a2272e6f67cb94089 244 Pfam PF14342 Domain of unknown function (DUF4396) 90 241 1.4E-40 T 22-04-2016 IPR025509 Domain of unknown function DUF4396 TMO_RS12345 47e223f2978d5f2dfbd23b9c88bf5416 100 Pfam PF13467 Ribbon-helix-helix domain 10 73 3.1E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain TMO_RS14665 e2eac305c8e69eae991e913570f4b700 371 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 77 369 9.7E-105 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 TMO_RS14665 e2eac305c8e69eae991e913570f4b700 371 Gene3D G3DSA:2.40.128.140 63 369 7.5E-113 T 22-04-2016 TMO_RS06465 680cacfd0315c3a3b174d768e8870145 105 Gene3D G3DSA:3.30.70.900 8 74 7.1E-4 T 22-04-2016 TMO_RS06465 680cacfd0315c3a3b174d768e8870145 105 SUPERFAMILY SSF54909 7 76 4.08E-8 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel TMO_RS01425 b3c3b69059570891991cdaf58418c795 433 Pfam PF04230 Polysaccharide pyruvyl transferase 68 367 1.1E-17 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase TMO_RS11035 2382c20aebd1c9447b8630f614f4ae92 130 TIGRFAM TIGR04360 other_trbK: conjugative transfer region protein TrbK 9 81 1.6E-19 T 22-04-2016 IPR027587 Conjugative transfer region protein TrbK TMO_RS00200 691dcfbe19dc1437939d656c0fc72f41 105 Pfam PF16083 LydA holin phage, holin superfamily III 19 93 4.5E-14 T 22-04-2016 IPR032126 LydA-like holin TMO_RS07190 bc5ea9becdd3e6c98eb07272d3ffbab8 772 Pfam PF02538 Hydantoinase B/oxoprolinase 48 627 5.5E-116 T 22-04-2016 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 TMO_RS17230 5c867ea48607f0aa3ce5f7f418169d90 199 Pfam PF04390 Lipopolysaccharide-assembly 35 189 2.9E-15 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 TMO_RS11080 0e86228c5b304c6cf5069300d2bf81ea 579 Pfam PF11843 Protein of unknown function (DUF3363) 403 577 3.4E-56 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 TMO_RS11080 0e86228c5b304c6cf5069300d2bf81ea 579 Pfam PF11843 Protein of unknown function (DUF3363) 276 401 1.3E-29 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 TMO_RS02445 4d75dd3b96282309f67f593b1e7c0029 233 Pfam PF06904 Extensin-like protein C-terminus 62 233 1.7E-59 T 22-04-2016 IPR009683 Extensin-like, C-terminal TMO_RS16210 92f73680cfaf821e604dd061445f5094 88 Pfam PF06620 Protein of unknown function (DUF1150) 52 88 9.6E-7 T 22-04-2016 IPR009531 Protein of unknown function DUF1150 TMO_RS11935 57a275faeb60a89bf335291b8e90f343 98 Pfam PF08809 Phage related hypothetical protein (DUF1799) 17 83 1.4E-12 T 22-04-2016 IPR014915 Bacteriophage TLS, TfmB TMO_RS14790 cd1c40b4a63d49289571677e085a2ace 152 Pfam PF02361 Cobalt transport protein 11 146 2.7E-12 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component