LOCUS NC_038352 3208 bp DNA circular VRL 24-AUG-2018 DEFINITION Torque teno midi virus 5 DNA, complete genome, isolate: MDJHem2. ACCESSION NC_038352 VERSION NC_038352.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Torque teno midi virus 5 ORGANISM Torque teno midi virus 5 Viruses; ssDNA viruses; Anelloviridae; Gammatorquevirus. REFERENCE 1 AUTHORS Ninomiya,M., Takahashi,M., Shimosegawa,T. and Okamoto,H. TITLE Analysis of the entire genomes of fifteen torque teno midi virus variants classifiable into a third group of genus Anellovirus JOURNAL Arch. Virol. 152 (11), 1961-1975 (2007) PUBMED 17712598 REFERENCE 2 (bases 1 to 3208) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3208) AUTHORS Okamoto,H. TITLE Direct Submission JOURNAL Submitted (11-MAY-2007) Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, Division of Virology, Department of Infection and Immunity; 3311-1 Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AB303552. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3208 /organism="Torque teno midi virus 5" /mol_type="genomic DNA" /isolate="MDJHem2" /isolation_source="human serum" /host="Homo sapiens" /db_xref="taxon:2065046" /country="Japan" /note="originally submitted as 'Torque teno midi virus'" gene 217..2587 /locus_tag="D1P80_gp1" /db_xref="GeneID:37616674" CDS join(217..590,2185..2587) /locus_tag="D1P80_gp1" /note="ORF4" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505755.1" /db_xref="GeneID:37616674" /translation="MQQASLLSTRDFYSPTRFNQDTKNQLWMSIIADVHDSTCDCPTP FAHLLSSIFPPGHQDRDRTINEILARDYKERCHSGGLADEDPGSAATRDIKQEDTGED LDPRDIDILLGAAAAAAEEEDTRNTPQKEQMHKGTQAPPNTPRKDPEMSPLTLRRRYL PRRRREPQTVHPQAAAATAAPQKKPPPALLRAEKQAKIFTTTDRNFRVKPFDPGCDWE TEQECAKAFCRPPRKYKNDPPYYPWLPPTPIVNFHLNYKF" gene 217..2388 /locus_tag="D1P80_gp2" /db_xref="GeneID:37616671" CDS join(217..590,1953..2388) /locus_tag="D1P80_gp2" /note="ORF3" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505756.1" /db_xref="GeneID:37616671" /translation="MQQASLLSTRDFYSPTRFNQDTKNQLWMSIIADVHDSTCDCPTP FAHLLSSIFPPGHQDRDRTINEILARDYKERCHSGGLADEDPGSAATRDIKQEDTGED LDPRDIDILLGAAAAAAEEEDTSGAALKLGNHQLMTQNTKETFPCPVTCKKQYKYQIQ KNKAQKPCSMTGITEGALLHRQLLKECKKTSKLIHLSNLMIQKHPPKRTDAQRNSSST KHTKKRSRDVSAHSAKKIPAKKKKRASDSSSTSSSSNSSTSKETSSSSSQS" gene 217..594 /locus_tag="D1P80_gp3" /db_xref="GeneID:37616672" CDS 217..594 /locus_tag="D1P80_gp3" /note="ORF2" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505757.1" /db_xref="GeneID:37616672" /translation="MQQASLLSTRDFYSPTRFNQDTKNQLWMSIIADVHDSTCDCPTP FAHLLSSIFPPGHQDRDRTINEILARDYKERCHSGGLADEDPGSAATRDIKQEDTGED LDPRDIDILLGAAAAAAEEEDTR" gene 441..2435 /locus_tag="D1P80_gp4" /db_xref="GeneID:37616673" CDS 441..2435 /locus_tag="D1P80_gp4" /note="ORF1" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505758.1" /db_xref="GeneID:37616673" /translation="MPFWWARRRRPWFGRYKRYKTRRYRRRFRPKRHRYPFRRRRRRR RRRRYKVRRKKKKIVIQQWQPESIKKCKIKGFGCLVLGSQGTQYLCYTNEAANYVPPK SPGGGGFGCEYITLEYLYKQWKAHNCIWTASNNYKDLCRYTGCTITLFRHKYIDFIFC YSVMPPFDINKLTYPDIQPQNLLLRQRHKLILSQASNPKGKLRVKVKIKPPKTMQTKW YFQKQIAELPLVQLQAAACDVPFVRIGCCNPSQVSTIYFLNPQFYYDTDWGATKNHAY MYIRTGVSLTGTYKGKDGKDHEKIIGEWKKMGEAQYYESINYDTGWFNSQFLSSYKIE KTSTKQPYAHLPIGVARYNPDQDTGQGNEVWLATIFKGHYDKPTVTDDFVIRGLPLWM AFYGYWSYLKYKTKDKGVFTNHMFVVKCPAIKPMQSAITTDYYPVIDLEFIQGKWPYE EQVTENHKKLWYPTAEHQTVTINNFVESGPYVPRLENQKSSTWELNYSYKFYFKWGGP QAGEPPVDDPKYQGDFPMPSNMQETIQISDPKKQSPETMFHDWNYRRGFITSSALKRM QENLQTDSSLESDDTETPPKKNRCTKELKLHQTHQEKIQRCLRSLCEEDTCQEEEESL RQFIHKQQQQQQHLKRNLLQLFSELKNKQRFLQLQTGILE" ORIGIN 1 gggtggagac tacaaaacta tataactaac tgcagtgacg aatggctgag tttaccccgc 61 tagacggtgc agggaccgga tcgagcgcag cgaggaggtc cacagctgcc caagggcggg 121 agcccgaggt gagtgaaacc accgaggtct aggggcaatt cgggctaggg cagtctagcg 181 gaacgggcaa gaaacttaaa tatactttct ttacagatgc aacaagcttc actactttca 241 acaagagact tttattcacc tacaagattt aatcaagata ctaaaaacca actatggatg 301 tctattattg ctgatgttca tgacagtacc tgtgactgtc caactccttt tgctcatttg 361 ctgtctagta tatttcctcc tggtcatcaa gatcgtgata gaacaattaa tgaaatactg 421 gcaagagatt acaaagaaag atgccattct ggtgggctcg cagacgaaga ccctggttcg 481 gccgctacaa gagatataaa acaagaagat acaggagaag atttagaccc aagagacata 541 gatatccttt taggcgccgc cgccgccgcc gcagaagaag aagatacaag gtaagaagaa 601 aaaaaaaaaa gattgtaatt caacaatggc agcctgaaag cataaaaaaa tgtaagatta 661 aaggatttgg ctgcttagta ttaggaagtc aaggtactca atacttatgt tatacaaatg 721 aagcagcaaa ctatgtacca cctaaaagcc ctgggggtgg aggctttggc tgtgaatata 781 tcactcttga atacttatat aaacaatgga aagcacataa ctgcatatgg actgcctcaa 841 ataactataa agacttatgc agatacacag gatgtactat tacccttttc agacataaat 901 atatagattt tatattttgt tactctgtca tgccaccatt tgacataaac aagttaactt 961 acccagatat acagccacaa aacttactac taagacaaag acataaacta atacttagcc 1021 aagctagcaa cccaaaagga aaattaagag ttaaagttaa aataaaacct cctaaaacta 1081 tgcaaactaa atggtatttt caaaaacaaa ttgcagaact gccactagtt cagctacaag 1141 ctgcagcctg cgatgttcca tttgttagaa ttggatgctg caaccctagc caggtatcaa 1201 ctatttattt tttaaatcca caattttatt atgatactga ttggggggca actaaaaacc 1261 acgcctacat gtatattaga acaggagtgt cacttacagg aacatataaa ggtaaagatg 1321 gtaaagacca tgaaaaaata ataggtgagt ggaaaaaaat gggtgaggca caatactatg 1381 aaagtataaa ctatgacact ggatggttta actctcaatt tttatcctca tacaaaattg 1441 aaaaaactag tacaaaacaa ccttatgctc acctacccat aggtgttgcc agatataatc 1501 ctgaccaaga cacaggtcaa ggaaatgaag tttggctagc aactattttt aaaggtcact 1561 atgacaaacc tactgtaaca gatgactttg ttattagagg cctaccccta tggatggctt 1621 tctatggcta ctggagctat ctaaaataca aaaccaaaga taaaggtgtt tttacaaatc 1681 atatgtttgt tgtaaaatgc cctgcaatta aaccaatgca atcagcaatt acaactgact 1741 actatccagt catagattta gaatttatac agggtaaatg gccttatgaa gaacaagtaa 1801 cagaaaacca taaaaagcta tggtatccca cagctgaaca tcaaacagta actattaata 1861 actttgtaga atcaggacca tatgtaccta gactagaaaa tcaaaaaagc tctacatggg 1921 aactaaatta ttcttacaaa ttttacttta agtggggcgg ccctcaagct ggggaaccac 1981 cagttgatga cccaaaatac caaggagact ttcccatgcc cagtaacatg caagaaacaa 2041 tacaaatatc agatccaaaa aaacaaagcc cagaaaccat gttccatgac tggaattaca 2101 gaaggggctt tattacatcg tcagctctta aaagaatgca agaaaacctc caaactgatt 2161 catctctcga atctgatgat acagaaacac cccccaaaaa gaacagatgc acaaaggaac 2221 tcaagctcca ccaaacacac caagaaaaga tccagagatg tctccgctca ctctgcgaag 2281 aagatacctg ccaagaagaa gaagagagcc tcagacagtt catccacaag cagcagcagc 2341 aacagcagca cctcaaaaga aacctcctcc agctcttctc agagctgaaa aacaagcaaa 2401 gatttttaca actacagaca ggaattttag agtaaaacca tttgacccag gatgtgactg 2461 ggaaacagaa caagaatgtg caaaagcatt ttgtagacca cctagaaaat ataaaaatga 2521 ccctccttac tacccatggt tacctccaac acccattgta aactttcacc ttaactataa 2581 attctaggcc cttactgttc acttagtact tgctgtttaa taaagtttgc ccccccaaaa 2641 aaaaaaaaaa aaaaaaaaaa aataaaaatt gcaaaaattc ggcgctcgcg cgcgctgcgc 2701 gcgcgcgagc gccgtcacgc gccggcgctc gcgcgccgcg cgtatgtgct aacacaccac 2761 gcacctagat tggggtgcgc gcgtagcgcg cgcaccccaa tgcgccccgc cctcgttccg 2821 acccgcttgc gcgggtcgga ccacttcggg ctcggggggg cgcgcctgcg gcgcttattt 2881 actaaacaga ctccgagtcg ccatttggcc cccctaagct ccgcccccct cataaatatt 2941 cataaaggaa accacaaaat ttgaattgcc gaccacaaac tgccatatgc taattacttc 3001 cccttttaca ctataaaaag gggaagtggg ggggcatagc ccccccacac cccccgcggg 3061 gggggcagag ccccccccgc acccccccta cgtcacagga cacgcccccg ccgccatctt 3121 gggtggagca gggcgggggc taaaatggcg ggacccaatc aatttatact ttcactttcc 3181 aataacaaca cgccacgtca ccatacag //