LOCUS NC_038356 3187 bp DNA circular VRL 24-AUG-2018 DEFINITION Torque teno midi virus 9 DNA, complete genome, isolate: MDJN2. ACCESSION NC_038356 VERSION NC_038356.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Torque teno midi virus 9 ORGANISM Torque teno midi virus 9 Viruses; ssDNA viruses; Anelloviridae; Gammatorquevirus. REFERENCE 1 AUTHORS Ninomiya,M., Takahashi,M., Shimosegawa,T. and Okamoto,H. TITLE Analysis of the entire genomes of fifteen torque teno midi virus variants classifiable into a third group of genus Anellovirus JOURNAL Arch. Virol. 152 (11), 1961-1975 (2007) PUBMED 17712598 REFERENCE 2 (bases 1 to 3187) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3187) AUTHORS Okamoto,H. TITLE Direct Submission JOURNAL Submitted (11-MAY-2007) Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, Division of Virology, Department of Infection and Immunity; 3311-1 Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AB303559. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3187 /organism="Torque teno midi virus 9" /mol_type="genomic DNA" /isolate="MDJN2" /isolation_source="human serum" /host="Homo sapiens" /db_xref="taxon:2065050" /country="Japan" /note="originally submitted as 'Torque teno midi virus'" gene 218..2558 /locus_tag="D1P84_gp1" /db_xref="GeneID:37616694" CDS join(218..585,2135..2558) /locus_tag="D1P84_gp1" /note="ORF4" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505771.1" /db_xref="GeneID:37616694" /translation="MTAYYNFARKTPYNNCTHEQLWISSFNDSHDAFCGCTKPVTHML SILFPEGHRDLDLTIRQILQREKEDTICLFGGTDERDGGEAQEDPGTKEKDIPDATEE EFTKIDVEDLLAAAADADTPRFRVKPTSQEKEKDNKRATIPTKRERRAPEMSPLTLRR KYLPRNPTNTKPARAHPAAAAATATTQVQHSQNHLRTQAAAATTRSTNRTSTLTPFKP GFETETELQLCIAFKRYPRKYKEDPPLYPWLPPEPRVNFNLNFKC" gene 218..2380 /locus_tag="D1P84_gp2" /db_xref="GeneID:37616691" CDS join(218..585,1912..2380) /locus_tag="D1P84_gp2" /note="ORF3" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505772.1" /db_xref="GeneID:37616691" /translation="MTAYYNFARKTPYNNCTHEQLWISSFNDSHDAFCGCTKPVTHML SILFPEGHRDLDLTIRQILQREKEDTICLFGGTDERDGGEAQEDPGTKEKDIPDATEE EFTKIDVEDLLAAAADADTPSGEVPTLKKHKLQIPASKVHMLCPVSSKKNYKSLIQQS RKQQQCSTAGTTGEDLLHSQLLKEFAKTNQLIQISKQVQSQANLSRKRKRQQKSYHTH QKRKKSSRNVSSHSTKKVSPKKSHKHKTCKSSSSSSSSNSNNSSTTFSKSSQNSSSSS NY" gene 218..589 /locus_tag="D1P84_gp3" /db_xref="GeneID:37616692" CDS 218..589 /locus_tag="D1P84_gp3" /note="ORF2" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505773.1" /db_xref="GeneID:37616692" /translation="MTAYYNFARKTPYNNCTHEQLWISSFNDSHDAFCGCTKPVTHML SILFPEGHRDLDLTIRQILQREKEDTICLFGGTDERDGGEAQEDPGTKEKDIPDATEE EFTKIDVEDLLAAAADADTPR" gene 430..2406 /locus_tag="D1P84_gp4" /db_xref="GeneID:37616693" CDS 430..2406 /locus_tag="D1P84_gp4" /note="ORF1" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505774.1" /db_xref="GeneID:37616693" /translation="MPFWWNRRKRWWRGARRPWYKRKRYTRRYRRRIYKNRRRRPTRR RRRRRHTKVRRKRQTIPVRQWQPERIVRCKIKGISVIVLGGEGKQFQCYTNEATTWTP LRTPGGGGFGVEKYTLSHLYDQYKFGNNIWTKTNILTDLVQYLGCKFVFYRHQYVDFI VKYSRNLPMTIEKLTYPHTHPQALLLSRHKRIIPSRVTKPHGKNRVIIKIKPTRVVLK KWFFQETFDTTGLCSIYAAACDLNYPHIGATSQNQIITLFGLNQSFYSKGNWGAVVQT GYQPYPSVTTFTYKTAATKQVETFNKPTTYEASVSYTTGWFNPKLMQLTEYVTPQQLA KPVLAFRYNAQLDNGKGNSVWFKSILTEDFSKPKVDSDLIISDMPIWQALYGFTDFIK AVKPDPNFLASYILLIETRFVEPFSSHATGNYWIPIDSSFVTGKGPYNTPIGDYTKTK WFPTVKNQQESINAFVKAGPYIPRLQDEKKSTWELHAFYQFYLKWGGTYTEETQVADP SKQGTYVMPSFIQEKLQIINPAKQKAAAMLHCWDYRRGLITQSAIKRICEDQPTDTDF QTGSESSQPLKKKKKTTKELPYPPKEKEELQKCLLSLYEESISQEIPQTQNLQELIQQ QQQQQQQLKYNILKIISELKQQQQLLGLQTGLVL" ORIGIN 1 gggtggagac ttttaaacta tataactaag tggggtggcg aatggctgag tttaccccgc 61 tagacggtgc agggaccgat cgagcgcagc gaggaggacc acagctgccc aagggcggga 121 gcccgaggtg agtgaaacca ccgaggtcta ggggcaattc gggctagggc agtctagcgg 181 aacgggcaag aaacttaaaa tatatgttat tttacagatg acagcctact acaactttgc 241 tagaaaaaca ccatacaaca actgtacaca tgaacaactg tggatttcca gttttaatga 301 tagccatgat gctttttgtg gatgcaccaa accagtaaca catatgctta gtattttatt 361 tccagaaggc catagagatt tagaccttac tatcagacaa attctacaaa gagaaaaaga 421 agacacaata tgcctttttg gtggaacaga cgaaagagat ggtggagagg cgcaagaaga 481 ccctggtaca aaagaaaaag atataccaga cgctacagaa gaagaattta caaaaataga 541 cgtagaagac ctactcgccg ccgccgcaga cgcagacaca ccaaggtaag aagaaaacga 601 caaactatac ctgtaagaca atggcaacca gaaagaatag ttagatgtaa aataaaaggc 661 atttctgtaa ttgtgctagg aggtgaaggc aagcagttcc aatgctatac aaatgaagct 721 actacatgga ctcctttaag gactcctggt gggggaggct ttggagtaga aaagtatact 781 ttaagtcatt tatatgatca atataaattt ggaaacaaca tatggacaaa gacaaatatt 841 ttaacagact tagtacaata cttaggatgc aagtttgtat tttacagaca tcagtatgtt 901 gactttatag taaaatactc cagaaactta ccaatgacaa tagagaaact tacataccca 961 cacacacatc ctcaagcact attgttatca agacataaaa gaataatacc aagtagagta 1021 actaagccac atggaaaaaa cagagtgata attaaaatta aacctaccag agttgtactt 1081 aaaaaatggt ttttccaaga aacatttgac actacaggcc tctgtagcat atatgctgct 1141 gcctgtgacc taaactaccc acacatagga gctacatcac aaaatcaaat aattacactt 1201 tttggcctaa atcaatcatt ttacagcaaa ggaaattggg gagcagttgt acagacaggc 1261 taccaaccat acccttcagt tactaccttt acctataaaa cagcagcaac taaacaagta 1321 gaaacattta ataaaccaac aacctatgaa gcgtctgtta gctacacaac aggctggttt 1381 aacccaaaac taatgcagtt aacagaatat gtaacaccac aacagctagc caaacctgta 1441 ctagcattta gatacaatgc acaactagac aatggcaaag gtaactctgt atggtttaaa 1501 agcattttaa cagaagactt ttctaaaccc aaagtagact ctgacttaat tatatcagac 1561 atgcccattt ggcaagcatt atatggtttt actgacttca ttaaagctgt aaaaccagat 1621 cccaattttt tagcttctta cattttacta atagaaacaa gatttgtaga accatttagc 1681 tctcatgcaa caggtaatta ctggatcccc atagacagct cctttgtcac aggaaaagga 1741 ccatataaca caccaatagg agactataca aaaaccaaat ggtttcctac agtaaaaaat 1801 caacaagaat ccattaatgc atttgtaaaa gcaggcccat acataccaag acttcaagat 1861 gaaaaaaaaa gcacatggga gttacatgcc ttttatcaat tttatttaaa gtggggaggt 1921 acctacactg aagaaacaca agttgcagat cccagcaagc aaggtacata tgttatgccc 1981 agtttcatcc aagaaaaact acaaatcatt aatccagcaa agcagaaagc agcagcaatg 2041 ctccactgct gggactacag gagaggactt attacacagt cagctattaa aagaatttgc 2101 gaagaccaac caactgatac agatttccaa acaggttcag agtcaagcca acctctcaag 2161 aaaaagaaaa agacaacaaa agagctacca tacccaccaa aagagaaaga agagctccag 2221 aaatgtctcc tctcactcta cgaagaaagt atctcccaag aaatcccaca aacacaaaac 2281 ctgcaagagc tcatccagca gcagcagcag caacagcaac aactcaagta caacattctc 2341 aaaatcatct cagaactcaa gcagcagcag caactactag gtctacaaac aggactagta 2401 ctttgacacc attcaaacca ggctttgaaa ctgaaacaga actacagctt tgcattgctt 2461 ttaaaagata tcccagaaaa tataaagaag accccccact ttacccctgg ttacctccag 2521 aacccagagt taactttaac ctcaatttta aatgctaggc atacaatgtt cacttagtaa 2581 agcatgttta tataagttgt acccccaaaa aaacaataaa aaaaaaaaaa aaaaaaaaaa 2641 taaaaaattg caaaaattcg gcgctcgcgc gcgctgcgcg cgcgcgagcg ccgtcacgcg 2701 ccggcgctcg cgcgccgcgc gtatgtgcta acacaccacg cacctagatt ggggtgcgcg 2761 cgtagcgcgc gcaccccaat gcgccccgcc ctcgttccga cccgcttgcg cgggtcggac 2821 cacttcgggc tcgggggggc gcgcctgcgg cgcttaatta ctaaacaaac tccgagttgc 2881 catttgcccc ccctaagctc cgcccccctc atgaatattc ataaaggaaa ccacaaaatt 2941 agaattgccg accacaaacg gccatatgct aattagttcc ccttttacac agtaaaaagg 3001 agaagtgggg gggcagagcc cccccacacc ccccgcgggg ggggcagagc cccccccgca 3061 ccccccctac gtcacaagcc acgcccccgc cgccatcttg ggtgcggctg cgcggagaca 3121 aaaatggcgg gacccaataa atttatagtt ttactttcca atcacatatt gccacgtcac 3181 tacaaag //