LOCUS NC_038358 3198 bp DNA circular VRL 24-AUG-2018 DEFINITION Torque teno midi virus 11 DNA, complete genome, isolate: MDJN47. ACCESSION NC_038358 VERSION NC_038358.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Torque teno midi virus 11 ORGANISM Torque teno midi virus 11 Viruses; ssDNA viruses; Anelloviridae; Gammatorquevirus. REFERENCE 1 AUTHORS Ninomiya,M., Takahashi,M., Shimosegawa,T. and Okamoto,H. TITLE Analysis of the entire genomes of fifteen torque teno midi virus variants classifiable into a third group of genus Anellovirus JOURNAL Arch. Virol. 152 (11), 1961-1975 (2007) PUBMED 17712598 REFERENCE 2 (bases 1 to 3198) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3198) AUTHORS Okamoto,H. TITLE Direct Submission JOURNAL Submitted (11-MAY-2007) Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, Division of Virology, Department of Infection and Immunity; 3311-1 Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AB303561. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3198 /organism="Torque teno midi virus 11" /mol_type="genomic DNA" /isolate="MDJN47" /isolation_source="human serum" /host="Homo sapiens" /db_xref="taxon:2065052" /country="Japan" /note="originally submitted 'Torque teno midi virus'" gene 219..2580 /locus_tag="D1P86_gp1" /db_xref="GeneID:37616704" CDS join(219..589,2160..2580) /locus_tag="D1P86_gp1" /note="ORF4" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505779.1" /db_xref="GeneID:37616704" /translation="MSNYSANHFFKPTPYNNDTKNQMWMSMISDGHDCMCNCPSPFGH LLASIFPPGHQDRFLTVEEIINRDIKECLFGGPDARDGGEAAAGPSTGVDTTIKREDP EEDFTKENIEELIAAAEKASERCVTKENENITPREHTPMHQQRSRGSPRLSPESLRRK YLPRNPRPAKHPATPPPAAAATAAHKAPASPAHQQLKEETKTNSTTNRNPRLTPFKPG FEQQTEQELAYAFKRPARKYKEDPPFYPWLPIATPIVNFHLNYKF" gene 219..2378 /locus_tag="D1P86_gp2" /db_xref="GeneID:37616701" CDS join(219..589,1937..2378) /locus_tag="D1P86_gp2" /note="ORF3" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505780.1" /db_xref="GeneID:37616701" /translation="MSNYSANHFFKPTPYNNDTKNQMWMSMISDGHDCMCNCPSPFGH LLASIFPPGHQDRFLTVEEIINRDIKECLFGGPDARDGGEAAAGPSTGVDTTIKREDP EEDFTKENIEELIAAAEKASESLEVHHYQKQKLKTLPHKELMRYPISNPKQYKSLTRK KTLQLQPYTAGTLEEGTLQAELLKECAKTQKLIQISKQMCHQRKRKHHSKRTHSHASA KKQRKSKTVSRVSTKKIPSKKSQTSKTSSNSSTSSSSNSSTQSSSFSSSSTT" gene 219..593 /locus_tag="D1P86_gp3" /db_xref="GeneID:37616702" CDS 219..593 /locus_tag="D1P86_gp3" /note="ORF2" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505781.1" /db_xref="GeneID:37616702" /translation="MSNYSANHFFKPTPYNNDTKNQMWMSMISDGHDCMCNCPSPFGH LLASIFPPGHQDRFLTVEEIINRDIKECLFGGPDARDGGEAAAGPSTGVDTTIKREDP EEDFTKENIEELIAAAEKASER" gene 431..2425 /locus_tag="D1P86_gp4" /db_xref="GeneID:37616703" CDS 431..2425 /locus_tag="D1P86_gp4" /note="ORF1" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505782.1" /db_xref="GeneID:37616703" /translation="MPFWWARRKRWWRGRRRPFYRRRYHYKKRRPRRRLYKRKHRRTY RRRRKSFRKVRRKRRTLPLKQWQPETIRKCKVKGIGIHTLGVEGTQYRCYTANKYEYT IAKQPSGGGFGVERYTLEYLYKEHKAGNNVWTTSNVNLDLVRYTGCRFIFWRHPHIDF VGVYSRNYPMQLQKYTYPDTHPQQIMLAKHKFFIPSLLTKPHGKRYVKIKIKPPTQMS NKWFFQEGFSDTGLVQIHTAACDLRYAHLGCCNTNQLASFLTLNTDFYQYAAWGNPKN PYIPTEQDKWYRPYRIVEPVTEVEDVKGNKKTITTVFTPYTETITYNKGWFQPALLQA KQITKPSQANPPLKGARYNPTLDTGENTAVWLTNVVNQSYYPPKTDLDLFVQGLPLWQ LLLGFPDWVRQKKKDPTFLQSYYLCFHCDAIEPKPGLHQVFIPVDYSFVQGKGPYDSL LSKWDNDHWYPTLKHQLQTINSVVETGPFVPKLDTLKNSTWELYSTYTFYFKFGGASL PEAETKDPATQGTHEVPDKQSKAIQIINPKKNTAAAALHCWDFRRGHITSRAFKRMCE NAETDSDFQADVSPKKTKTSLQENTLPCISKEAEEVQDCLQSLYEENTFQEIPDQQNI QQLLHQQQQQQQHTKLQLLQLINNLKKKQKLIQLQTGILD" ORIGIN 1 aggaggagac ttttacacta tataactaag tgtactgacg aatggctgag tttaccccgc 61 tagacggtgc agagaccgga tcgagcgcag cgaggaggtc tccggctgcc catgggcggg 121 agcccgaggt gagtgaaacc accgaggtct aggggcaatt cgggctaggg cagtctagcg 181 gaacgggcaa gaaacttaaa tacacttttg ttttacagat gagcaactat tctgctaatc 241 acttctttaa acctacacca tacaacaatg ataccaaaaa tcaaatgtgg atgtctatga 301 tctctgatgg ccacgactgc atgtgcaact gccctagtcc ttttggccat ttgcttgctt 361 ctatatttcc tcctggtcat caagaccgct ttctcacagt tgaagaaatt attaacagag 421 atattaagga atgccttttt ggtgggccag acgcaagaga tggtggagag gccgccgcag 481 gcccttctac aggcgtagat accactataa aaagagaaga cccagaagaa gactttacaa 541 aagaaaacat agaagaactt atcgccgccg cagaaaaagc ttcagaaagg taaggagaaa 601 aagaagaacc ttacctctta aacaatggca accagagaca ataagaaaat gtaaagttaa 661 aggcataggc attcacacct taggagtaga aggtacccaa tacagatgtt acacagctaa 721 caaatatgaa tatactatag ctaaacaacc atcgggagga gggtttggag tagaaagata 781 tacacttgaa tacttataca aagaacataa agcaggcaac aatgtatgga caacatcaaa 841 tgttaacctt gatcttgtta gatacacagg atgcagattt atattttgga gacatccaca 901 cattgacttt gtaggagtgt acagcagaaa ctatcctatg caactacaaa aatatacata 961 tccagataca catccacaac aaattatgtt agctaaacat aaatttttta tacctagttt 1021 actaactaaa ccccatggta aaagatatgt aaaaataaaa attaaacctc caactcaaat 1081 gagtaacaaa tggtttttcc aagaaggctt ttcagataca ggcttagtac aaattcacac 1141 tgctgcctgt gaccttcgat atgcacactt aggctgctgt aacaccaatc aattagcaag 1201 ctttcttaca ctaaacactg acttctacca atatgcagcc tggggaaatc ctaaaaatcc 1261 atatatacct actgaacaag acaaatggta cagaccttat agaatagttg agccagtaac 1321 tgaagtagaa gatgttaaag gcaacaaaaa gaccataaca acagtgttca ctccatacac 1381 agaaacaatt acctataaca aaggctggtt tcagccagca ttattacaag caaaacaaat 1441 aacaaaacct tcacaagcta atccacctct aaagggagct agatacaatc caacattaga 1501 cactggtgaa aacacagctg tatggctaac aaatgttgtt aaccagtcat actacccacc 1561 aaaaacagac ttagatttat ttgtgcaagg ccttccctta tggcaactac tactaggatt 1621 ccctgactgg gtaaggcaaa aaaaaaaaga cccaactttt ttacaatcat actacctatg 1681 ttttcactgc gatgcaattg aaccaaagcc aggactacac caagtattta tacctgtaga 1741 ctactccttt gtacaaggaa aaggtcccta tgactcttta ctatctaaat gggacaatga 1801 ccactggtac ccaaccttaa aacaccaatt acaaacaatt aattcagttg ttgaaactgg 1861 accctttgta cctaaattag acacattaaa aaactctaca tgggaactgt attcaacata 1921 cacattttac tttaagtttg gaggtgcatc attaccagaa gcagaaacta aagaccctgc 1981 cacacaagga actcatgagg tacccgataa gcaatccaaa gcaatacaaa tcattaaccc 2041 gaaaaaaaac actgcagctg cagccttaca ctgctgggac tttagaagag ggcacattac 2101 aagcagagct tttaaaagaa tgtgcgaaaa cgcagaaact gattcagatt tccaagcaga 2161 tgtgtcacca aagaaaacga aaacatcact ccaagagaac acactcccat gcatcagcaa 2221 agaagcagag gaagtccaag actgtctcca gagtctctac gaagaaaata ccttccaaga 2281 aatcccagac cagcaaaaca tccagcaact cctccaccag cagcagcagc aacagcagca 2341 cacaaagctc cagcttctcc agctcatcaa caacttaaag aagaaacaaa aactaattca 2401 actacaaaca ggaatcctag actaacacca tttaaaccag gttttgaaca acaaactgaa 2461 caagaattag catatgcatt taaaagacct gctagaaaat ataaagaaga ccctccattt 2521 tatccctggt tacccattgc taccccaatt gtaaattttc atctcaacta caaattctag 2581 gccggcaatg ttcacttagt cactcatgtt taataaagtt taaccccaaa aaaaaaaaaa 2641 aaaaaaaaaa taaaaaattg caaaaattcg gcgctcgcgc gcgctgcgcg cgcgcgagcg 2701 ccttcacgcg ccggcgctcg cgcgccgcgc gtatgtgcta acacaccacg cacctagatt 2761 ggggtgcgcg cgtagcgcgc gcaccccaat gcgccccgcc ctcgttccga cccgcttgcg 2821 cgggtcggac cacttcgggc tcgggggggc gcgcctgcgg cgcttattta ctaaacagac 2881 tccgagtcgc catttgaccc cccctaagct ccgcccccct catgaatatt cataaaggaa 2941 accacaaaat tagaattgcc aaccacaaac tgccatatgc aaattacttc ccctcttaca 3001 cagtaaaaag gggaagtggg ggggcaaagc ccccccacac cccccgcggg gggggcaggc 3061 ccccccccgc acccccccta cgtcacaaac cacgcccccg ccgccatctt gggtgcggca 3121 gggcgggggc taaaatggcg ggacccaatc aatttatact ttcactttcc aattaaaaac 3181 agccacgtca ctacaaag //