LOCUS NC_038359 3187 bp DNA circular VRL 24-AUG-2018 DEFINITION Torque teno midi virus 12 DNA, complete genome, isolate: MDJN51. ACCESSION NC_038359 VERSION NC_038359.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Torque teno midi virus 12 ORGANISM Torque teno midi virus 12 Viruses; ssDNA viruses; Anelloviridae; Gammatorquevirus. REFERENCE 1 AUTHORS Ninomiya,M., Takahashi,M., Shimosegawa,T. and Okamoto,H. TITLE Analysis of the entire genomes of fifteen torque teno midi virus variants classifiable into a third group of genus Anellovirus JOURNAL Arch. Virol. 152 (11), 1961-1975 (2007) PUBMED 17712598 REFERENCE 2 (bases 1 to 3187) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3187) AUTHORS Okamoto,H. TITLE Direct Submission JOURNAL Submitted (11-MAY-2007) Contact:Hiroaki Okamoto Jichi Medical University School of Medicine, Division of Virology, Department of Infection and Immunity; 3311-1 Yakushiji, Shimotsuke-Shi, Tochigi-Ken 329-0498, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AB303562. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..3187 /organism="Torque teno midi virus 12" /mol_type="genomic DNA" /isolate="MDJN51" /isolation_source="human serum" /host="Homo sapiens" /db_xref="taxon:2065053" /country="Japan" /note="originally submitted 'Torque teno midi virus'" gene 219..2559 /locus_tag="D1P87_gp1" /db_xref="GeneID:37616709" CDS join(219..568,2130..2559) /locus_tag="D1P87_gp1" /note="ORF4" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505783.1" /db_xref="GeneID:37616709" /translation="MSIFYKPAKYNGHTKQQMWMSVIADFHDPMCNCWHPFGHLLDII FPEGHKDRDKTIAQIITRDSKCHSGGEDEGASGQTEDLHIKEERDTPADTTGGMAEEE TTDALLAAAVENFERCPRISRTHTKKEKESGSTTHTPTRKRSRNTQLSPLALQRRYLP KATDRRGDQPAHPAAAAAAAPAQKRHPTPHDADKRTTTTTTTTHRHNSLTKFKPGFEQ DTEEELAKIFKRPIRTFKEDPPFYPWLPITPKVSFKLNFKG" gene 219..2351 /locus_tag="D1P87_gp2" /db_xref="GeneID:37616706" CDS join(219..568,1919..2351) /locus_tag="D1P87_gp2" /note="ORF3" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505784.1" /db_xref="GeneID:37616706" /translation="MSIFYKPAKYNGHTKQQMWMSVIADFHDPMCNCWHPFGHLLDII FPEGHKDRDKTIAQIITRDSKCHSGGEDEGASGQTEDLHIKEERDTPADTTGGMAEEE TTDALLAAAVENFESGEDHHLMNQTLQTQQTKTNMMFPILCNKQYKLKILKDKTPDLS STNGITDEALLKKELLRECQLTSQLLQMSQNLQNTHQKRKREWEHNSHSHKKKIKKHS AVSSRSAKKISTKSHRQKRRSTSSSSSSSSSSTSSKETSYTS" gene 219..572 /locus_tag="D1P87_gp3" /db_xref="GeneID:37616707" CDS 219..572 /locus_tag="D1P87_gp3" /note="ORF2" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505785.1" /db_xref="GeneID:37616707" /translation="MSIFYKPAKYNGHTKQQMWMSVIADFHDPMCNCWHPFGHLLDII FPEGHKDRDKTIAQIITRDSKCHSGGEDEGASGQTEDLHIKEERDTPADTTGGMAEEE TTDALLAAAVENFER" gene 413..2407 /locus_tag="D1P87_gp4" /db_xref="GeneID:37616708" CDS 413..2407 /locus_tag="D1P87_gp4" /note="ORF1" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505786.1" /db_xref="GeneID:37616708" /translation="MPFWWRRRRRFWTNRRFTYKRRKRYPRRYNRRYGRRRNYRRPAR RRRRKLRKVRRKKKQIAVKQWQPESITKCKILGHSALVVGAEGKQMFCYTTNKNIAVP PKSPYGGGFGVEQYSLNYLYEEYTFHNNYWTKSNILKDLCRFLWLKIIFFRDNKTDFI VSYDRNPPFNLTKFTYPGAHPQQMLLQKHHKLILSQMTKNPNKLTKKFKIKPPRQMIS KWFFTKPFAKYPLLSLKASALDLRHSYLGCCNENSQVYFFYLNHGFYKQTNWGQYSTT PYRPSNEINTVYYKDKTGNKKQIGPFNTTATAYDDSVSYTKGYFQPPFLQTQFVCTSS MCDVKAGYLPINVAIYNPMQDSSQGNAIYLVSTLTNTWDQPPKDSSILIQGMPIWLGL FGYLDYVRQVKKDKTWLESHVLVLKSPAIFTFPQPGADAWYCPLSKTFIDGVGPYRTD LTIKQKERWFPQIQHQYEILNSFVEAGPFIPKYTNQSESNWELKFKYIFHFKWGGPSL NEPDITNPANQDQYDVPDTLQQTIQIENPERQDPRSILHQWDYRRGFIKERALKRMST YLSTPSDVPESPEHTPKKKKRVGAQLTLPQEKDQETLSCLLSLCKEDIYQKPQTEEEI NQLIQQQQQQQHQLKRDILHLMMQIREQQQLLQLHTGIIP" ORIGIN 1 gggtggagac ttctaaacta tataactaac tacagtgacg aatggctgag tttaccccgc 61 tagacggtgc agagaccgga tcgagcgcag cgaggaggtc ttcagctgcc catgggcggg 121 agcccgaggt gagtgaaacc accgaggtct aggggcaact cgggctaggg cagtctagcg 181 gaacgggcaa gaaacttaaa atatattatg ttttacagat gtccatcttc tacaaaccag 241 ctaaatacaa tggacacaca aagcaacaaa tgtggatgtc agtaatagct gactttcatg 301 atcctatgtg taattgttgg cacccttttg ggcacctact agatattata tttcctgaag 361 gtcacaaaga cagagataaa acaatagcac aaataattac tagagattca aaatgccatt 421 ctggtggcga agacgaaggc gcttctggac aaacagaaga tttacatata aaagaagaaa 481 gagatacccc cgcagataca acaggcggta tggcagaaga agaaactaca gacgccctgc 541 tcgccgccgc cgtagaaaac ttcgaaaggt aagaagaaaa aagaagcaaa tagctgtaaa 601 acaatggcaa ccagaaagca taactaaatg taaaatacta ggacattctg ccttagtagt 661 tggagctgaa ggtaaacaaa tgttttgcta tacaactaac aaaaatatag ctgttccacc 721 taaaagcccc tatggaggag gctttggagt tgaacaatac agcttaaact acctatatga 781 agaatatacc ttccacaaca actactggac aaaatcaaat attttaaaag acttgtgtag 841 atttttgtgg cttaaaatta tattttttag agacaacaaa acagacttta tagtttcata 901 tgacagaaat ccaccattta atcttaccaa atttacatat cctggagcac atccacagca 961 aatgctactt caaaaacatc acaaactaat tttatcacaa atgacaaaaa acccaaacaa 1021 actaacaaaa aaatttaaaa ttaaaccacc tagacaaatg atatccaaat ggttctttac 1081 taaacctttt gcaaagtatc cactactctc acttaaagcc tcagcactag atcttagaca 1141 ctcatattta ggatgctgta atgaaaattc acaagtttat tttttctacc taaaccatgg 1201 cttttataaa caaactaatt ggggtcaata tagcacaaca ccatacagac catcaaatga 1261 gattaatact gtatactata aagataaaac tggcaacaaa aaacaaatag gtccatttaa 1321 tacaacagcc acagcatatg atgactctgt atcctatact aaaggatact ttcaaccacc 1381 atttttacaa acacaatttg tatgtacatc tagcatgtgt gatgttaaag ctggctattt 1441 accaattaat gtagccatat acaatccaat gcaagacagt agtcaaggca atgcaatata 1501 ccttgtaagc acccttacaa acacatggga tcagcctcca aaagactctt ctatactaat 1561 tcaaggaatg cctatatggc taggtctatt tggctattta gactatgtaa gacaagtaaa 1621 aaaagacaag acatggctag aaagccatgt tttagtactt aaaagcccag ctatatttac 1681 atttccacaa ccaggtgcag atgcctggta ttgtcccctt tcaaaaacat ttatagatgg 1741 tgtaggtccc tacagaacag atttaacaat taaacaaaaa gaaagatggt ttccacaaat 1801 acaacaccag tatgaaatac taaactcatt tgtggaagca ggacctttta ttccaaaata 1861 cacaaatcaa tcagagagta actgggaact aaaatttaaa tatattttcc attttaagtg 1921 gggaggacca tcacttaatg aaccagacat tacaaaccca gcaaaccaag accaatatga 1981 tgttcccgat actctgcaac aaacaataca aattgaaaat cctgaaagac aagaccccag 2041 atctatcctc caccaatggg attacagacg aggctttatt aaagaaagag ctcttaagag 2101 aatgtcaact tacctctcaa ctccttcaga tgtcccagaa tctccagaac acacaccaaa 2161 aaagaaaaag agagtgggag cacaactcac actcccacaa gaaaaagatc aagaaacact 2221 cagctgtctc ctctcgctct gcaaagaaga tatctaccaa aagccacaga cagaagagga 2281 gatcaaccag ctcatccagc agcagcagca gcagcagcac cagctcaaaa gagacatcct 2341 acacctcatg atgcagataa gagaacaaca acaactacta caactacaca caggcataat 2401 tccttaacaa aatttaaacc aggctttgaa caagacacag aagaagaact agctaaaatc 2461 tttaaaagac ccataagaac ttttaaagaa gaccctccat tttatccctg gttacctata 2521 acacccaaag tttcatttaa gcttaatttt aaaggctagg ccgacactgt tcacttagcg 2581 gtgtttgttt aataaagttt gcaccccaaa aaaattgtaa aataaaaaag aaaaaaaaaa 2641 taaaaaattg caaaaattcg gcgctcgcgc gcgctgcgcg cgcgcgagcg ccgtcacgcg 2701 ccggcgctcg cgcgccgcgc gtatgtgcta acacaccacg cacctagatt ggggtgcgcg 2761 cgtagcgcgc gcaccccaat gcgccccgcc ctcgttccga cccgcttgcg cgggtcggac 2821 cacttcgggc tcgggggggc gcgcctgcgg cgcttattta ctaaacagac tccaagttgc 2881 cattttgccc ccccttagct ccgccccctc atgaatattc ataaaggaaa ccacaaaatt 2941 tgaattgccg accacaaact gccatatgct aattagttcc ccttttacac agtaaaaagg 3001 ggaagtgggg gggcaaagcc cccccacacc ccccgcgggg ggggcatagc cccccccgca 3061 ccccccctac gtcacaagcc acgcccccgc cgccatcttg ggtgcggcag ggcgggggct 3121 aaaatggcgg gagccaatca ctttatactt ttaccttcca gttaaaacat gccacgtcac 3181 aaacaag //