LOCUS NC_038348 2199 bp DNA linear VRL 24-AUG-2018 DEFINITION Torque teno tupaia virus ORF3, ORF2, ORF1 genes for hypothetical proteins, complete cds, isolate: Tbc-TTV14. ACCESSION NC_038348 VERSION NC_038348.1 DBLINK BioProject: PRJNA485481 KEYWORDS RefSeq. SOURCE Torque teno tupaia virus ORGANISM Torque teno tupaia virus Viruses; ssDNA viruses; Anelloviridae; Deltatorquevirus. REFERENCE 1 AUTHORS Okamoto,H., Nishizawa,T., Takahashi,M., Tawara,A., Peng,Y., Kishimoto,J. and Wang,Y. TITLE Genomic and evolutionary characterization of TT virus (TTV) in tupaias and comparison with species-specific TTVs in humans and non-human primates JOURNAL J. Gen. Virol. 82 (PT 9), 2041-2050 (2001) PUBMED 11514713 REFERENCE 2 (bases 1 to 2199) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-AUG-2018) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2199) AUTHORS Okamoto,H. TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-machi, Kawachi-gun, Tochigi 329-0498, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AB057358. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2199 /organism="Torque teno tupaia virus" /mol_type="genomic DNA" /isolate="Tbc-TTV14" /host="Tupaia belangeri chinensis" /db_xref="taxon:687381" /note="originally submitted as 'Torque teno virus'; synonym: TT virus" gene 343..1923 /locus_tag="D1P76_gp1" /db_xref="GeneID:37616658" CDS join(343..518,1455..1923) /locus_tag="D1P76_gp1" /note="ORF3" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505744.1" /db_xref="GeneID:37616658" /translation="MDPAKIWWHSCLLSHKSWCNCTEPRNHLPGWPTSEGTSTEDGDI ITDAEMLTLAEDTEGLHTTNKPDKPTSTALPINHFQADFMTAFQNYLSPHHHKTLIST PCDPATMTRTESSQKKVSDALQTLLTLATEDILSPPSPQHQTRSRVPAGMRGRWAAKQ LENPADAEKDAADHRRRRTRRQLRYRQRVTRSPPYPDLGEPLESSSSSDSLDAY" gene 343..522 /locus_tag="D1P76_gp2" /db_xref="GeneID:37616656" CDS 343..522 /locus_tag="D1P76_gp2" /note="ORF2" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505745.1" /db_xref="GeneID:37616656" /translation="MDPAKIWWHSCLLSHKSWCNCTEPRNHLPGWPTSEGTSTEDGDI ITDAEMLTLAEDTEG" gene 432..1940 /locus_tag="D1P76_gp3" /db_xref="GeneID:37616657" CDS 432..1940 /locus_tag="D1P76_gp3" /note="ORF1" /codon_start=1 /product="hypothetical protein" /protein_id="YP_009505746.1" /db_xref="GeneID:37616657" /translation="MAYFRRNFYGGRRHYYRRRNAYTRRRYRRVRRRHRGRRFPYFKQ GKRRRTRLLHVTDPRYKAHCTITGWVPIAMTRIQLISQPFTVDTLSPFHVYPGGYGYG VFTLEAMYKEHLMKRNRWSRSNAGFDLGRYLGTWLTLVPHPYFSYLFYYDPEYGNTFE FKKLIHPAIMITHPKTILVLSNKRGGNRRKWPRMWIPRPAIFADGWEFQKDLCQHGLF AFGWAWVDLDRPWMADISKPAQTIDPSTYDKKNDMINKVPNMWWKEAANDWLTEWGRP QGSGVTQQFNQLAMAGPFVLKTNKSEYVNTELLQIILFYKSHFQWGGEFLQDKVLADP TKIPPAQTAYYQQAGQTNLYGSPYKPLSSGLHDSISELPIASPPQNPHKYTVRPSDYD KDGILTEESFRRLTDSPYTSDGGHSFSSFSTASDPLEGTSRYARPLGRKTTREPSRRR KRRRRSPSPEDEETAPIPPKSNSEPSISGPGRATRKQLLQRLFRRLLTSSPQ" intron 519..1454 /locus_tag="D1P76_gp3" /note="ORF3" ORIGIN 1 ttgcattttc accacattta tgggcgcctg cggcgcctat ttcactaatg gcgggaaatt 61 tcccgcgcgc gccaatttct aaactggcgc cataccacaa aaatttaaaa aaaggcgcgc 121 gcgggctcat tagaatacac acccaaatac gtcacactta atttacataa aagtcaccat 181 aagtaaaatg caggttccgg atggctgagt ttatgccgcc agcggtcaga gccatcagac 241 cacgctctga cgagctgggc gggtgccgga ggctgtgccg cgcactgccg gagtcaaggg 301 gcctttcggg cagcgagagt ctggcggaac gggcctaacc gcatggatcc tgctaagatc 361 tggtggcaca gctgtttact aagccacaag agctggtgca actgcacaga acccagaaac 421 cacttaccag gatggcctac ttcagaagga acttctacgg aggacggcga cattattacc 481 gacgcagaaa tgcttacact cgccgaagat acagaagggt aaggagacgc cacagaggcc 541 gacgctttcc ttactttaaa caaggcaaac gtagacggac cagactatta catgtcacgg 601 atccgcgcta caaagcccac tgtacaatta caggatgggt gcctatagca atgactagaa 661 ttcaacttat atctcagcct tttaccgtcg atactcttag tccatttcac gtgtatcccg 721 gaggatatgg atacggagta tttactttgg aagcaatgta caaagaacat ttgatgaaaa 781 gaaaccgctg gagtagatcc aatgccggct ttgacttagg aagatactta ggcacatggc 841 taacactagt gcctcatcca tacttttcat acctatttta ctatgatcca gaatatggta 901 acacattcga atttaaaaaa ctaatacatc cggccataat gataacacat cctaaaacta 961 tactagtttt aagcaataaa agaggaggaa acagaagaaa atggccgaga atgtggatac 1021 ctagaccagc tatatttgca gacggatggg agtttcaaaa agacttatgt caacacggac 1081 tatttgcatt tggttgggca tgggttgatt tagacagacc ttggatggct gacataagta 1141 aacctgcaca aactattgat ccttccactt atgataaaaa gaatgatatg ataaacaaag 1201 ttccgaacat gtggtggaaa gaggcagcca acgactggct aaccgagtgg ggacgaccac 1261 aaggtagcgg agtcactcaa caatttaacc aacttgctat ggctggccca tttgtactaa 1321 aaactaacaa aagtgaatat gttaacacgg aacttcttca aatcattctt ttttacaaat 1381 cacactttca atggggagga gaatttctac aagacaaagt acttgctgat cctacaaaaa 1441 ttcctcccgc acagactgca tactaccaac aagccggaca aaccaacctc tacggctctc 1501 cctataaacc actttcaagc ggacttcatg acagcatttc agaactacct atcgcctcac 1561 caccacaaaa ccctcataag tacaccgtgc gacccagcga ctatgacaag gacggaatcc 1621 tcacagaaga aagtttcaga cgccttacag actctcctta cactagcgac ggaggacatt 1681 ctttctcctc cttctccaca gcatcagacc cgctcgaggg taccagcagg tatgcgcggc 1741 cgctgggccg caaaacaact agagaaccca gcagacgccg aaaaagacgc cgcagatcac 1801 cgtcgccgga ggacgaggag acagctccga taccgccaaa gagtaactcg gagccctcca 1861 tatccggacc tgggagagcc actagaaagc agctcctcca gcgactcttt agacgcctac 1921 taacttcgtc cccacaataa aattgcgttg taccacaaac atgcgttgtc ttctgtgact 1981 tagggttagg atatggatta tgcttagcca ccgcttaccc cgaccaccgc ccccaaaaaa 2041 aaaaagtcct ccacatcccc gaccaccacc ccaaataaaa aaaaaaacta gccctggaca 2101 tagtccaggg cctaacccta agtcccaggg gggggggaca agcccccccc cctggacccc 2161 cccccctaag gggggacttc gtccccccta acacccccc //