locus-tag class description TREAZ_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TREAZ_RS00005 PF00308 Bacterial dnaA protein TREAZ_RS00005 PF11638 DnaA N-terminal domain TREAZ_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TREAZ_RS00010 PF02767 DNA polymerase III beta subunit, central domain TREAZ_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TREAZ_RS00015 PF02463 RecF/RecN/SMC N terminal domain TREAZ_RS00020 PF05258 Dna[CI] antecedent, DciA TREAZ_RS00050 PF01202 Shikimate kinase TREAZ_RS00065 PF01112 Asparaginase TREAZ_RS00075 PF00072 Response regulator receiver domain TREAZ_RS00075 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS00080 PF07694 5TMR of 5TMR-LYT TREAZ_RS00080 PF13492 GAF domain TREAZ_RS00080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS00080 PF06580 Histidine kinase TREAZ_RS00085 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREAZ_RS00095 PF00005 ABC transporter TREAZ_RS00100 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS00110 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS00115 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS00125 PF13419 Haloacid dehalogenase-like hydrolase TREAZ_RS00145 PF00072 Response regulator receiver domain TREAZ_RS00150 PF13407 Periplasmic binding protein domain TREAZ_RS00155 PF00005 ABC transporter TREAZ_RS00160 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS00165 PF00171 Aldehyde dehydrogenase family TREAZ_RS00175 PF00923 Transaldolase/Fructose-6-phosphate aldolase TREAZ_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS00180 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS00180 PF00989 PAS fold TREAZ_RS00180 PF11808 Phosphate regulon sensor protein PhoR TREAZ_RS00185 PF00072 Response regulator receiver domain TREAZ_RS00185 PF00486 Transcriptional regulatory protein, C terminal TREAZ_RS00190 PF01895 PhoU domain TREAZ_RS00195 PF00005 ABC transporter TREAZ_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS00205 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS00210 PF12849 PBP superfamily domain TREAZ_RS00240 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS00240 PF01434 Peptidase family M41 TREAZ_RS00240 PF06480 FtsH Extracellular TREAZ_RS00240 PF17862 AAA+ lid domain TREAZ_RS00245 PF00872 Transposase, Mutator family TREAZ_RS00250 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS00250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TREAZ_RS00255 PF16875 Glycosyl hydrolase family 36 N-terminal domain TREAZ_RS00255 PF16874 Glycosyl hydrolase family 36 C-terminal domain TREAZ_RS00265 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TREAZ_RS00265 PF00970 Oxidoreductase FAD-binding domain TREAZ_RS00265 PF00175 Oxidoreductase NAD-binding domain TREAZ_RS00270 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS00270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TREAZ_RS00275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS00290 PF02447 GntP family permease TREAZ_RS00310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREAZ_RS00315 PF08497 Radical SAM N-terminal TREAZ_RS00315 PF11842 Domain of unknown function (DUF3362) TREAZ_RS00315 PF04055 Radical SAM superfamily TREAZ_RS00320 PF01106 NifU-like domain TREAZ_RS00355 PF00749 tRNA synthetases class I (E and Q), catalytic domain TREAZ_RS00355 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TREAZ_RS00365 PF02654 Cobalamin-5-phosphate synthase TREAZ_RS00370 PF02277 Phosphoribosyltransferase TREAZ_RS00380 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TREAZ_RS00385 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS00385 PF08369 Proto-chlorophyllide reductase 57 kD subunit TREAZ_RS00390 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREAZ_RS00395 PF00005 ABC transporter TREAZ_RS00400 PF01032 FecCD transport family TREAZ_RS00410 PF07715 TonB-dependent Receptor Plug Domain TREAZ_RS00410 PF00593 TonB dependent receptor TREAZ_RS00435 PF00085 Thioredoxin TREAZ_RS00450 PF01914 MarC family integral membrane protein TREAZ_RS00455 PF01136 Peptidase family U32 TREAZ_RS00455 PF16325 Peptidase family U32 C-terminal domain TREAZ_RS00460 PF00436 Single-strand binding protein family TREAZ_RS00470 PF01545 Cation efflux family TREAZ_RS00470 PF16916 Dimerisation domain of Zinc Transporter TREAZ_RS00475 PF01121 Dephospho-CoA kinase TREAZ_RS00490 PF01409 tRNA synthetases class II core domain (F) TREAZ_RS00500 PF00672 HAMP domain TREAZ_RS00500 PF02743 Cache domain TREAZ_RS00500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS00505 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREAZ_RS00510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TREAZ_RS00525 PF07729 FCD domain TREAZ_RS00525 PF00392 Bacterial regulatory proteins, gntR family TREAZ_RS00540 PF01261 Xylose isomerase-like TIM barrel TREAZ_RS00545 PF01207 Dihydrouridine synthase (Dus) TREAZ_RS00550 PF01026 TatD related DNase TREAZ_RS00555 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS00555 PF00072 Response regulator receiver domain TREAZ_RS00560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS00560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS00575 PF02673 Bacitracin resistance protein BacA TREAZ_RS00585 PF00266 Aminotransferase class-V TREAZ_RS00590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREAZ_RS00590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREAZ_RS00600 PF01025 GrpE TREAZ_RS00605 PF00012 Hsp70 protein TREAZ_RS00610 PF01556 DnaJ C terminal domain TREAZ_RS00610 PF00684 DnaJ central domain TREAZ_RS00610 PF00226 DnaJ domain TREAZ_RS00615 PF03630 Fumble TREAZ_RS00620 PF00248 Aldo/keto reductase family TREAZ_RS00665 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS00665 PF17151 Periplasmic sensor domain TREAZ_RS00675 PF01594 AI-2E family transporter TREAZ_RS00685 PF00989 PAS fold TREAZ_RS00685 PF00072 Response regulator receiver domain TREAZ_RS00685 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS00685 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS00685 PF01627 Hpt domain TREAZ_RS00695 PF00334 Nucleoside diphosphate kinase TREAZ_RS00700 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS00705 PF03707 Bacterial signalling protein N terminal repeat TREAZ_RS00705 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS00705 PF00563 EAL domain TREAZ_RS00715 PF00448 SRP54-type protein, GTPase domain TREAZ_RS00715 PF02978 Signal peptide binding domain TREAZ_RS00715 PF02881 SRP54-type protein, helical bundle domain TREAZ_RS00740 PF07556 Protein of unknown function (DUF1538) TREAZ_RS00750 PF01476 LysM domain TREAZ_RS00750 PF04972 BON domain TREAZ_RS00755 PF02772 S-adenosylmethionine synthetase, central domain TREAZ_RS00755 PF00438 S-adenosylmethionine synthetase, N-terminal domain TREAZ_RS00755 PF02773 S-adenosylmethionine synthetase, C-terminal domain TREAZ_RS00765 PF00230 Major intrinsic protein TREAZ_RS00770 PF00672 HAMP domain TREAZ_RS00770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS00785 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS00800 PF00669 Bacterial flagellin N-terminal helical region TREAZ_RS00800 PF00700 Bacterial flagellin C-terminal helical region TREAZ_RS00875 PF13635 Domain of unknown function (DUF4143) TREAZ_RS00875 PF13173 AAA domain TREAZ_RS00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS00890 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS00890 PF01627 Hpt domain TREAZ_RS00890 PF00072 Response regulator receiver domain TREAZ_RS00900 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) TREAZ_RS00905 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TREAZ_RS00905 PF00128 Alpha amylase, catalytic domain TREAZ_RS00915 PF02661 Fic/DOC family TREAZ_RS00915 PF12728 Helix-turn-helix domain TREAZ_RS00930 PF00468 Ribosomal protein L34 TREAZ_RS00935 PF00825 Ribonuclease P TREAZ_RS00940 PF01809 Putative membrane protein insertion efficiency factor TREAZ_RS00945 PF14849 YidC periplasmic domain TREAZ_RS00945 PF02096 60Kd inner membrane protein TREAZ_RS00950 PF14804 Jag N-terminus TREAZ_RS00950 PF01424 R3H domain TREAZ_RS00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS00960 PF09308 LuxQ, periplasmic TREAZ_RS00960 PF00072 Response regulator receiver domain TREAZ_RS00960 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS00970 PF00860 Permease family TREAZ_RS00975 PF01554 MatE TREAZ_RS00980 PF05193 Peptidase M16 inactive domain TREAZ_RS00980 PF00675 Insulinase (Peptidase family M16) TREAZ_RS00990 PF01522 Polysaccharide deacetylase TREAZ_RS00995 PF00849 RNA pseudouridylate synthase TREAZ_RS01005 PF00232 Glycosyl hydrolase family 1 TREAZ_RS01010 PF05448 Acetyl xylan esterase (AXE1) TREAZ_RS01015 PF00156 Phosphoribosyl transferase domain TREAZ_RS01020 PF01180 Dihydroorotate dehydrogenase TREAZ_RS01025 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TREAZ_RS01030 PF02554 Carbon starvation protein CstA TREAZ_RS01040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TREAZ_RS01045 PF00248 Aldo/keto reductase family TREAZ_RS01055 PF01979 Amidohydrolase family TREAZ_RS01060 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TREAZ_RS01060 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TREAZ_RS01065 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TREAZ_RS01065 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TREAZ_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01080 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01085 PF00005 ABC transporter TREAZ_RS01085 PF17912 MalK OB fold domain TREAZ_RS01085 PF03459 TOBE domain TREAZ_RS01100 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS01115 PF01381 Helix-turn-helix TREAZ_RS01125 PF00072 Response regulator receiver domain TREAZ_RS01125 PF00486 Transcriptional regulatory protein, C terminal TREAZ_RS01130 PF16736 Single Cache-like TREAZ_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS01130 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS01130 PF00989 PAS fold TREAZ_RS01150 PF00403 Heavy-metal-associated domain TREAZ_RS01180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TREAZ_RS01180 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TREAZ_RS01190 PF00117 Glutamine amidotransferase class-I TREAZ_RS01190 PF13673 Acetyltransferase (GNAT) domain TREAZ_RS01190 PF03352 Methyladenine glycosylase TREAZ_RS01190 PF00958 GMP synthase C terminal domain TREAZ_RS01190 PF13302 Acetyltransferase (GNAT) domain TREAZ_RS01200 PF17863 AAA lid domain TREAZ_RS01200 PF07726 ATPase family associated with various cellular activities (AAA) TREAZ_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01235 PF01047 MarR family TREAZ_RS01235 PF00480 ROK family TREAZ_RS01240 PF17863 AAA lid domain TREAZ_RS01240 PF07726 ATPase family associated with various cellular activities (AAA) TREAZ_RS01255 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS01260 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain TREAZ_RS01260 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain TREAZ_RS01260 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain TREAZ_RS01260 PF08531 Alpha-L-rhamnosidase N-terminal domain TREAZ_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01275 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01280 PF02502 Ribose/Galactose Isomerase TREAZ_RS01300 PF01381 Helix-turn-helix TREAZ_RS01305 PF00330 Aconitase family (aconitate hydratase) TREAZ_RS01310 PF00694 Aconitase C-terminal domain TREAZ_RS01320 PF02417 Chromate transporter TREAZ_RS01325 PF02417 Chromate transporter TREAZ_RS01330 PF02938 GAD domain TREAZ_RS01330 PF01336 OB-fold nucleic acid binding domain TREAZ_RS01330 PF00152 tRNA synthetases class II (D, K and N) TREAZ_RS01345 PF00753 Metallo-beta-lactamase superfamily TREAZ_RS01355 PF00149 Calcineurin-like phosphoesterase TREAZ_RS01355 PF10518 TAT (twin-arginine translocation) pathway signal sequence TREAZ_RS01360 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS01370 PF00072 Response regulator receiver domain TREAZ_RS01370 PF01339 CheB methylesterase TREAZ_RS01375 PF01739 CheR methyltransferase, SAM binding domain TREAZ_RS01375 PF03705 CheR methyltransferase, all-alpha domain TREAZ_RS01385 PF01066 CDP-alcohol phosphatidyltransferase TREAZ_RS01390 PF02666 Phosphatidylserine decarboxylase TREAZ_RS01400 PF03006 Haemolysin-III related TREAZ_RS01415 PF00672 HAMP domain TREAZ_RS01415 PF00072 Response regulator receiver domain TREAZ_RS01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS01415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS01415 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS01415 PF01627 Hpt domain TREAZ_RS01425 PF00464 Serine hydroxymethyltransferase TREAZ_RS01440 PF02581 Thiamine monophosphate synthase TREAZ_RS01445 PF04055 Radical SAM superfamily TREAZ_RS01445 PF06968 Biotin and Thiamin Synthesis associated domain TREAZ_RS01450 PF05690 Thiazole biosynthesis protein ThiG TREAZ_RS01460 PF00672 HAMP domain TREAZ_RS01460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS01460 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS01460 PF01627 Hpt domain TREAZ_RS01460 PF00072 Response regulator receiver domain TREAZ_RS01460 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS01475 PF00672 HAMP domain TREAZ_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS01480 PF00899 ThiF family TREAZ_RS01495 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01500 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01510 PF00392 Bacterial regulatory proteins, gntR family TREAZ_RS01510 PF07702 UTRA domain TREAZ_RS01515 PF10996 Beta-Casp domain TREAZ_RS01515 PF00753 Metallo-beta-lactamase superfamily TREAZ_RS01515 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TREAZ_RS01520 PF00588 SpoU rRNA Methylase family TREAZ_RS01520 PF08032 RNA 2'-O ribose methyltransferase substrate binding TREAZ_RS01525 PF04439 Streptomycin adenylyltransferase TREAZ_RS01530 PF08543 Phosphomethylpyrimidine kinase TREAZ_RS01545 PF13407 Periplasmic binding protein domain TREAZ_RS01550 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS01555 PF00005 ABC transporter TREAZ_RS01565 PF00005 ABC transporter TREAZ_RS01565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS01570 PF00005 ABC transporter TREAZ_RS01570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS01585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS01590 PF00465 Iron-containing alcohol dehydrogenase TREAZ_RS01590 PF00171 Aldehyde dehydrogenase family TREAZ_RS01610 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREAZ_RS01610 PF12838 4Fe-4S dicluster domain TREAZ_RS01610 PF02256 Iron hydrogenase small subunit TREAZ_RS01625 PF06971 Putative DNA-binding protein N-terminus TREAZ_RS01625 PF02629 CoA binding domain TREAZ_RS01630 PF01232 Mannitol dehydrogenase Rossmann domain TREAZ_RS01630 PF08125 Mannitol dehydrogenase C-terminal domain TREAZ_RS01645 PF13732 Domain of unknown function (DUF4162) TREAZ_RS01645 PF00005 ABC transporter TREAZ_RS01680 PF01784 NIF3 (NGG1p interacting factor 3) TREAZ_RS01685 PF01252 Signal peptidase (SPase) II TREAZ_RS01720 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS01720 PF16450 Proteasomal ATPase OB C-terminal domain TREAZ_RS01720 PF17758 Proteasomal ATPase OB N-terminal domain TREAZ_RS01735 PF08220 DeoR-like helix-turn-helix domain TREAZ_RS01735 PF00455 DeoR C terminal sensor domain TREAZ_RS01745 PF03129 Anticodon binding domain TREAZ_RS01745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREAZ_RS01745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREAZ_RS01765 PF01380 SIS domain TREAZ_RS01775 PF00005 ABC transporter TREAZ_RS01795 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS01930 PF00672 HAMP domain TREAZ_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS01930 PF13426 PAS domain TREAZ_RS01930 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS01935 PF00486 Transcriptional regulatory protein, C terminal TREAZ_RS01935 PF00072 Response regulator receiver domain TREAZ_RS01940 PF00665 Integrase core domain TREAZ_RS02000 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS02000 PF00072 Response regulator receiver domain TREAZ_RS02035 PF00501 AMP-binding enzyme TREAZ_RS02050 PF01820 D-ala D-ala ligase N-terminus TREAZ_RS02050 PF07478 D-ala D-ala ligase C-terminus TREAZ_RS02060 PF01170 Putative RNA methylase family UPF0020 TREAZ_RS02060 PF02926 THUMP domain TREAZ_RS02065 PF00365 Phosphofructokinase TREAZ_RS02095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS02095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS02100 PF08032 RNA 2'-O ribose methyltransferase substrate binding TREAZ_RS02100 PF00588 SpoU rRNA Methylase family TREAZ_RS02105 PF02272 DHHA1 domain TREAZ_RS02105 PF01411 tRNA synthetases class II (A) TREAZ_RS02105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREAZ_RS02120 PF00005 ABC transporter TREAZ_RS02125 PF02405 Permease MlaE TREAZ_RS02145 PF04225 Opacity-associated protein A LysM-like domain TREAZ_RS02145 PF01551 Peptidase family M23 TREAZ_RS02160 PF04468 PSP1 C-terminal conserved region TREAZ_RS02180 PF06418 CTP synthase N-terminus TREAZ_RS02180 PF00117 Glutamine amidotransferase class-I TREAZ_RS02190 PF00005 ABC transporter TREAZ_RS02200 PF00672 HAMP domain TREAZ_RS02200 PF02743 Cache domain TREAZ_RS02200 PF06580 Histidine kinase TREAZ_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS02205 PF08769 Sporulation initiation factor Spo0A C terminal TREAZ_RS02205 PF00072 Response regulator receiver domain TREAZ_RS02210 PF13407 Periplasmic binding protein domain TREAZ_RS02215 PF00005 ABC transporter TREAZ_RS02220 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS02230 PF13407 Periplasmic binding protein domain TREAZ_RS02235 PF00892 EamA-like transporter family TREAZ_RS02245 PF01554 MatE TREAZ_RS02280 PF13305 Tetracyclin repressor-like, C-terminal domain TREAZ_RS02280 PF00440 Bacterial regulatory proteins, tetR family TREAZ_RS02285 PF01554 MatE TREAZ_RS02290 PF00072 Response regulator receiver domain TREAZ_RS02290 PF01627 Hpt domain TREAZ_RS02290 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS02295 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS02295 PF17151 Periplasmic sensor domain TREAZ_RS02300 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS02300 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS02300 PF01627 Hpt domain TREAZ_RS02300 PF00989 PAS fold TREAZ_RS02300 PF00072 Response regulator receiver domain TREAZ_RS02310 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TREAZ_RS02320 PF00588 SpoU rRNA Methylase family TREAZ_RS02330 PF02449 Beta-galactosidase TREAZ_RS02330 PF08532 Beta-galactosidase trimerisation domain TREAZ_RS02330 PF08533 Beta-galactosidase C-terminal domain TREAZ_RS02335 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS02340 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS02350 PF00703 Glycosyl hydrolases family 2 TREAZ_RS02350 PF02929 Beta galactosidase small chain TREAZ_RS02350 PF02837 Glycosyl hydrolases family 2, sugar binding domain TREAZ_RS02350 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TREAZ_RS02350 PF16353 Domain of unknown function(DUF4981) TREAZ_RS02355 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS02370 PF00171 Aldehyde dehydrogenase family TREAZ_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS02375 PF02203 Tar ligand binding domain homologue TREAZ_RS02375 PF00672 HAMP domain TREAZ_RS02385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREAZ_RS02395 PF00465 Iron-containing alcohol dehydrogenase TREAZ_RS02405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TREAZ_RS02415 PF01921 tRNA synthetases class I (K) TREAZ_RS02435 PF07670 Nucleoside recognition TREAZ_RS02435 PF02421 Ferrous iron transport protein B TREAZ_RS02435 PF04023 FeoA domain TREAZ_RS02435 PF07664 Ferrous iron transport protein B C terminus TREAZ_RS02435 PF17910 FeoB cytosolic helical domain TREAZ_RS02440 PF18125 RlmM ferredoxin-like domain TREAZ_RS02440 PF01728 FtsJ-like methyltransferase TREAZ_RS02455 PF00501 AMP-binding enzyme TREAZ_RS02455 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS02480 PF02446 4-alpha-glucanotransferase TREAZ_RS02490 PF04542 Sigma-70 region 2 TREAZ_RS02490 PF00140 Sigma-70 factor, region 1.2 TREAZ_RS02490 PF03979 Sigma-70 factor, region 1.1 TREAZ_RS02490 PF04539 Sigma-70 region 3 TREAZ_RS02490 PF04545 Sigma-70, region 4 TREAZ_RS02500 PF01515 Phosphate acetyl/butaryl transferase TREAZ_RS02505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS02505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS02520 PF02909 Tetracyclin repressor-like, C-terminal domain TREAZ_RS02520 PF00440 Bacterial regulatory proteins, tetR family TREAZ_RS02530 PF00529 HlyD membrane-fusion protein of T1SS TREAZ_RS02530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TREAZ_RS02535 PF00873 AcrB/AcrD/AcrF family TREAZ_RS02555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TREAZ_RS02560 PF00465 Iron-containing alcohol dehydrogenase TREAZ_RS02565 PF02132 RecR protein TREAZ_RS02565 PF13662 Toprim domain TREAZ_RS02570 PF02575 YbaB/EbfC DNA-binding family TREAZ_RS02575 PF12169 DNA polymerase III subunits gamma and tau domain III TREAZ_RS02610 PF00596 Class II Aldolase and Adducin N-terminal domain TREAZ_RS02615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS02615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS02625 PF02511 Thymidylate synthase complementing protein TREAZ_RS02665 PF01081 KDPG and KHG aldolase TREAZ_RS02685 PF02779 Transketolase, pyrimidine binding domain TREAZ_RS02685 PF00456 Transketolase, thiamine diphosphate binding domain TREAZ_RS02690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREAZ_RS02720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TREAZ_RS02765 PF00011 Hsp20/alpha crystallin family TREAZ_RS02775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TREAZ_RS02785 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TREAZ_RS02790 PF18073 Rubredoxin metal binding domain TREAZ_RS02790 PF06745 KaiC TREAZ_RS02795 PF13382 Adenine deaminase C-terminal domain TREAZ_RS02795 PF01979 Amidohydrolase family TREAZ_RS02800 PF02602 Uroporphyrinogen-III synthase HemD TREAZ_RS02800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREAZ_RS02805 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TREAZ_RS02805 PF03900 Porphobilinogen deaminase, C-terminal domain TREAZ_RS02810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREAZ_RS02810 PF10414 Sirohaem synthase dimerisation region TREAZ_RS02810 PF14824 Sirohaem biosynthesis protein central TREAZ_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS02840 PF12857 TOBE-like domain TREAZ_RS02840 PF00005 ABC transporter TREAZ_RS02840 PF17850 CysA C-terminal regulatory domain TREAZ_RS02845 PF01507 Phosphoadenosine phosphosulfate reductase family TREAZ_RS02850 PF01507 Phosphoadenosine phosphosulfate reductase family TREAZ_RS02855 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS02860 PF00899 ThiF family TREAZ_RS02875 PF01554 MatE TREAZ_RS02880 PF02772 S-adenosylmethionine synthetase, central domain TREAZ_RS02880 PF00438 S-adenosylmethionine synthetase, N-terminal domain TREAZ_RS02880 PF02773 S-adenosylmethionine synthetase, C-terminal domain TREAZ_RS02890 PF09084 NMT1/THI5 like TREAZ_RS02895 PF00005 ABC transporter TREAZ_RS02900 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS02905 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREAZ_RS02910 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS02915 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS02915 PF08369 Proto-chlorophyllide reductase 57 kD subunit TREAZ_RS02920 PF00183 Hsp90 protein TREAZ_RS02945 PF00144 Beta-lactamase TREAZ_RS02965 PF00872 Transposase, Mutator family TREAZ_RS02970 PF11974 Bacterial alpha-2-macroglobulin MG3 domain TREAZ_RS02970 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TREAZ_RS02970 PF07703 Alpha-2-macroglobulin bait region domain TREAZ_RS02970 PF17962 Bacterial macroglobulin domain 6 TREAZ_RS02970 PF01835 MG2 domain TREAZ_RS02970 PF00207 Alpha-2-macroglobulin family TREAZ_RS02970 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain TREAZ_RS02975 PF00924 Mechanosensitive ion channel TREAZ_RS02975 PF05552 Conserved TM helix TREAZ_RS02980 PF00912 Transglycosylase TREAZ_RS02980 PF06832 Penicillin-Binding Protein C-terminus Family TREAZ_RS02980 PF00905 Penicillin binding protein transpeptidase domain TREAZ_RS02995 PF05524 PEP-utilising enzyme, N-terminal TREAZ_RS02995 PF00391 PEP-utilising enzyme, mobile domain TREAZ_RS02995 PF02896 PEP-utilising enzyme, TIM barrel domain TREAZ_RS03000 PF01926 50S ribosome-binding GTPase TREAZ_RS03000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TREAZ_RS03020 PF01554 MatE TREAZ_RS03025 PF01022 Bacterial regulatory protein, arsR family TREAZ_RS03030 PF00403 Heavy-metal-associated domain TREAZ_RS03070 PF04552 Sigma-54, DNA binding domain TREAZ_RS03070 PF04963 Sigma-54 factor, core binding domain TREAZ_RS03070 PF00309 Sigma-54 factor, Activator interacting domain (AID) TREAZ_RS03080 PF00255 Glutathione peroxidase TREAZ_RS03095 PF01541 GIY-YIG catalytic domain TREAZ_RS03095 PF08459 UvrC Helix-hairpin-helix N-terminal TREAZ_RS03095 PF02151 UvrB/uvrC motif TREAZ_RS03105 PF02310 B12 binding domain TREAZ_RS03105 PF02607 B12 binding domain TREAZ_RS03120 PF00111 2Fe-2S iron-sulfur cluster binding domain TREAZ_RS03120 PF00970 Oxidoreductase FAD-binding domain TREAZ_RS03120 PF00175 Oxidoreductase NAD-binding domain TREAZ_RS03150 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS03150 PF00072 Response regulator receiver domain TREAZ_RS03160 PF05384 Sensor protein DegS TREAZ_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS03160 PF07730 Histidine kinase TREAZ_RS03165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS03165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS03180 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03190 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03220 PF03063 Prismane/CO dehydrogenase family TREAZ_RS03225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREAZ_RS03230 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TREAZ_RS03230 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain TREAZ_RS03235 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TREAZ_RS03240 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TREAZ_RS03240 PF04060 Putative Fe-S cluster TREAZ_RS03245 PF00809 Pterin binding enzyme TREAZ_RS03270 PF08668 HDOD domain TREAZ_RS03280 PF09308 LuxQ, periplasmic TREAZ_RS03280 PF00072 Response regulator receiver domain TREAZ_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS03280 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS03285 PF00072 Response regulator receiver domain TREAZ_RS03295 PF02615 Malate/L-lactate dehydrogenase TREAZ_RS03300 PF00557 Metallopeptidase family M24 TREAZ_RS03300 PF01321 Creatinase/Prolidase N-terminal domain TREAZ_RS03305 PF01212 Beta-eliminating lyase TREAZ_RS03310 PF01380 SIS domain TREAZ_RS03340 PF11897 Protein of unknown function (DUF3417) TREAZ_RS03340 PF00343 Carbohydrate phosphorylase TREAZ_RS03360 PF03788 LrgA family TREAZ_RS03365 PF04172 LrgB-like family TREAZ_RS03370 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS03385 PF00581 Rhodanese-like domain TREAZ_RS03385 PF00899 ThiF family TREAZ_RS03405 PF00266 Aminotransferase class-V TREAZ_RS03415 PF00132 Bacterial transferase hexapeptide (six repeats) TREAZ_RS03420 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS03430 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS03435 PF00005 ABC transporter TREAZ_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03460 PF17762 HTH domain found in ParB protein TREAZ_RS03460 PF02195 ParB-like nuclease domain TREAZ_RS03465 PF13614 AAA domain TREAZ_RS03480 PF02603 HPr Serine kinase N terminus TREAZ_RS03480 PF07475 HPr Serine kinase C-terminal domain TREAZ_RS03495 PF00310 Glutamine amidotransferases class-II TREAZ_RS03495 PF01645 Conserved region in glutamate synthase TREAZ_RS03495 PF04898 Glutamate synthase central domain TREAZ_RS03495 PF01493 GXGXG motif TREAZ_RS03500 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TREAZ_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS03505 PF00578 AhpC/TSA family TREAZ_RS03510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TREAZ_RS03515 PF02683 Cytochrome C biogenesis protein transmembrane region TREAZ_RS03525 PF00294 pfkB family carbohydrate kinase TREAZ_RS03530 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03540 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03545 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS03570 PF06250 YhcG PDDEXK nuclease domain TREAZ_RS03570 PF17761 DUF1016 N-terminal domain TREAZ_RS03590 PF00206 Lyase TREAZ_RS03590 PF14698 Argininosuccinate lyase C-terminal TREAZ_RS03595 PF00571 CBS domain TREAZ_RS03595 PF00478 IMP dehydrogenase / GMP reductase domain TREAZ_RS03605 PF00709 Adenylosuccinate synthetase TREAZ_RS03610 PF00117 Glutamine amidotransferase class-I TREAZ_RS03610 PF02540 NAD synthase TREAZ_RS03610 PF00958 GMP synthase C terminal domain TREAZ_RS03615 PF03448 MgtE intracellular N domain TREAZ_RS03615 PF01769 Divalent cation transporter TREAZ_RS03615 PF00571 CBS domain TREAZ_RS03620 PF13361 UvrD-like helicase C-terminal domain TREAZ_RS03620 PF00580 UvrD/REP helicase N-terminal domain TREAZ_RS03640 PF06470 SMC proteins Flexible Hinge Domain TREAZ_RS03640 PF02463 RecF/RecN/SMC N terminal domain TREAZ_RS03645 PF03459 TOBE domain TREAZ_RS03645 PF17912 MalK OB fold domain TREAZ_RS03645 PF00005 ABC transporter TREAZ_RS03650 PF00271 Helicase conserved C-terminal domain TREAZ_RS03650 PF00270 DEAD/DEAH box helicase TREAZ_RS03655 PF02607 B12 binding domain TREAZ_RS03655 PF02310 B12 binding domain TREAZ_RS03660 PF12833 Helix-turn-helix domain TREAZ_RS03660 PF01497 Periplasmic binding protein TREAZ_RS03665 PF12833 Helix-turn-helix domain TREAZ_RS03665 PF01497 Periplasmic binding protein TREAZ_RS03670 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS03670 PF17874 MalT-like TPR region TREAZ_RS03675 PF14841 FliG middle domain TREAZ_RS03675 PF14842 FliG N-terminal domain TREAZ_RS03675 PF01706 FliG C-terminal domain TREAZ_RS03680 PF00675 Insulinase (Peptidase family M16) TREAZ_RS03680 PF05193 Peptidase M16 inactive domain TREAZ_RS03680 PF08367 Peptidase M16C associated TREAZ_RS03690 PF01078 Magnesium chelatase, subunit ChlI TREAZ_RS03690 PF13335 Magnesium chelatase, subunit ChlI C-terminal TREAZ_RS03705 PF02811 PHP domain TREAZ_RS03720 PF01979 Amidohydrolase family TREAZ_RS03730 PF00027 Cyclic nucleotide-binding domain TREAZ_RS03730 PF13545 Crp-like helix-turn-helix domain TREAZ_RS03745 PF02082 Transcriptional regulator TREAZ_RS03750 PF03063 Prismane/CO dehydrogenase family TREAZ_RS03760 PF18267 Rubredoxin NAD+ reductase C-terminal domain TREAZ_RS03760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TREAZ_RS03760 PF04324 BFD-like [2Fe-2S] binding domain TREAZ_RS03760 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS03760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TREAZ_RS03795 PF17863 AAA lid domain TREAZ_RS03795 PF07726 ATPase family associated with various cellular activities (AAA) TREAZ_RS03805 PF02525 Flavodoxin-like fold TREAZ_RS03810 PF02110 Hydroxyethylthiazole kinase family TREAZ_RS03830 PF08471 Class II vitamin B12-dependent ribonucleotide reductase TREAZ_RS03830 PF02867 Ribonucleotide reductase, barrel domain TREAZ_RS03885 PF03023 Lipid II flippase MurJ TREAZ_RS03890 PF03009 Glycerophosphoryl diester phosphodiesterase family TREAZ_RS03900 PF02595 Glycerate kinase family TREAZ_RS03910 PF00005 ABC transporter TREAZ_RS03915 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS03930 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS03935 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS03940 PF08369 Proto-chlorophyllide reductase 57 kD subunit TREAZ_RS03940 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS03945 PF00583 Acetyltransferase (GNAT) family TREAZ_RS03950 PF00872 Transposase, Mutator family TREAZ_RS03955 PF01638 HxlR-like helix-turn-helix TREAZ_RS03970 PF04055 Radical SAM superfamily TREAZ_RS03970 PF02579 Dinitrogenase iron-molybdenum cofactor TREAZ_RS03975 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREAZ_RS03980 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS03990 PF00005 ABC transporter TREAZ_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04000 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREAZ_RS04005 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS04010 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS04015 PF02310 B12 binding domain TREAZ_RS04015 PF02607 B12 binding domain TREAZ_RS04035 PF12728 Helix-turn-helix domain TREAZ_RS04035 PF12727 PBP superfamily domain TREAZ_RS04045 PF12704 MacB-like periplasmic core domain TREAZ_RS04045 PF02687 FtsX-like permease family TREAZ_RS04045 PF00005 ABC transporter TREAZ_RS04050 PF02492 CobW/HypB/UreG, nucleotide-binding domain TREAZ_RS04075 PF07715 TonB-dependent Receptor Plug Domain TREAZ_RS04075 PF00593 TonB dependent receptor TREAZ_RS04090 PF01032 FecCD transport family TREAZ_RS04095 PF00005 ABC transporter TREAZ_RS04100 PF00691 OmpA family TREAZ_RS04105 PF00210 Ferritin-like domain TREAZ_RS04110 PF00118 TCP-1/cpn60 chaperonin family TREAZ_RS04115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS04115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS04120 PF00075 RNase H TREAZ_RS04145 PF13173 AAA domain TREAZ_RS04145 PF13635 Domain of unknown function (DUF4143) TREAZ_RS04155 PF02074 Carboxypeptidase Taq (M32) metallopeptidase TREAZ_RS04165 PF01066 CDP-alcohol phosphatidyltransferase TREAZ_RS04195 PF12683 Protein of unknown function (DUF3798) TREAZ_RS04200 PF00571 CBS domain TREAZ_RS04200 PF01368 DHH family TREAZ_RS04200 PF02272 DHHA1 domain TREAZ_RS04200 PF01743 Poly A polymerase head domain TREAZ_RS04205 PF03129 Anticodon binding domain TREAZ_RS04205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREAZ_RS04210 PF04055 Radical SAM superfamily TREAZ_RS04210 PF06969 HemN C-terminal domain TREAZ_RS04220 PF00654 Voltage gated chloride channel TREAZ_RS04225 PF03104 DNA polymerase family B, exonuclease domain TREAZ_RS04225 PF00136 DNA polymerase family B TREAZ_RS04240 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04265 PF04542 Sigma-70 region 2 TREAZ_RS04265 PF04545 Sigma-70, region 4 TREAZ_RS04265 PF03979 Sigma-70 factor, region 1.1 TREAZ_RS04265 PF00140 Sigma-70 factor, region 1.2 TREAZ_RS04265 PF04539 Sigma-70 region 3 TREAZ_RS04280 PF00814 Glycoprotease family TREAZ_RS04290 PF00830 Ribosomal L28 family TREAZ_RS04295 PF03099 Biotin/lipoate A/B protein ligase family TREAZ_RS04295 PF12706 Beta-lactamase superfamily domain TREAZ_RS04305 PF01047 MarR family TREAZ_RS04305 PF00480 ROK family TREAZ_RS04310 PF00107 Zinc-binding dehydrogenase TREAZ_RS04310 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS04315 PF00248 Aldo/keto reductase family TREAZ_RS04325 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04340 PF08402 TOBE domain TREAZ_RS04340 PF00005 ABC transporter TREAZ_RS04350 PF07687 Peptidase dimerisation domain TREAZ_RS04350 PF01546 Peptidase family M20/M25/M40 TREAZ_RS04355 PF16363 GDP-mannose 4,6 dehydratase TREAZ_RS04365 PF16326 ABC transporter C-terminal domain TREAZ_RS04365 PF00005 ABC transporter TREAZ_RS04365 PF12848 ABC transporter TREAZ_RS04370 PF08239 Bacterial SH3 domain TREAZ_RS04390 PF01230 HIT domain TREAZ_RS04400 PF01134 Glucose inhibited division protein A TREAZ_RS04400 PF13932 GidA associated domain TREAZ_RS04405 PF01055 Glycosyl hydrolases family 31 TREAZ_RS04410 PF01554 MatE TREAZ_RS04415 PF10396 GTP-binding protein TrmE N-terminus TREAZ_RS04415 PF12631 MnmE helical domain TREAZ_RS04415 PF01926 50S ribosome-binding GTPase TREAZ_RS04420 PF01569 PAP2 superfamily TREAZ_RS04435 PF00842 Alanine racemase, C-terminal domain TREAZ_RS04435 PF01168 Alanine racemase, N-terminal domain TREAZ_RS04440 PF01268 Formate--tetrahydrofolate ligase TREAZ_RS04445 PF00574 Clp protease TREAZ_RS04450 PF01195 Peptidyl-tRNA hydrolase TREAZ_RS04455 PF00144 Beta-lactamase TREAZ_RS04465 PF03819 MazG nucleotide pyrophosphohydrolase domain TREAZ_RS04475 PF10371 Domain of unknown function TREAZ_RS04475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREAZ_RS04475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TREAZ_RS04475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TREAZ_RS04475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TREAZ_RS04480 PF00465 Iron-containing alcohol dehydrogenase TREAZ_RS04515 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TREAZ_RS04520 PF01979 Amidohydrolase family TREAZ_RS04530 PF00072 Response regulator receiver domain TREAZ_RS04535 PF01207 Dihydrouridine synthase (Dus) TREAZ_RS04540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TREAZ_RS04540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TREAZ_RS04545 PF05191 Adenylate kinase, active site lid TREAZ_RS04550 PF02535 ZIP Zinc transporter TREAZ_RS04560 PF06134 L-rhamnose isomerase (RhaA) TREAZ_RS04565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS04565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS04590 PF02637 GatB domain TREAZ_RS04590 PF02934 GatB/GatE catalytic domain TREAZ_RS04595 PF01204 Trehalase TREAZ_RS04605 PF02541 Ppx/GppA phosphatase family TREAZ_RS04610 PF02503 Polyphosphate kinase middle domain TREAZ_RS04610 PF13089 Polyphosphate kinase N-terminal domain TREAZ_RS04610 PF17941 Polyphosphate kinase C-terminal domain 1 TREAZ_RS04610 PF13090 Polyphosphate kinase C-terminal domain 2 TREAZ_RS04615 PF10672 S-adenosylmethionine-dependent methyltransferase TREAZ_RS04615 PF17785 PUA-like domain TREAZ_RS04620 PF00999 Sodium/hydrogen exchanger family TREAZ_RS04625 PF02659 Putative manganese efflux pump TREAZ_RS04635 PF01726 LexA DNA binding domain TREAZ_RS04635 PF00717 Peptidase S24-like TREAZ_RS04640 PF00158 Sigma-54 interaction domain TREAZ_RS04640 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS04640 PF00072 Response regulator receiver domain TREAZ_RS04645 PF00672 HAMP domain TREAZ_RS04645 PF00989 PAS fold TREAZ_RS04645 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS04650 PF00381 PTS HPr component phosphorylation site TREAZ_RS04655 PF02603 HPr Serine kinase N terminus TREAZ_RS04655 PF07475 HPr Serine kinase C-terminal domain TREAZ_RS04660 PF00005 ABC transporter TREAZ_RS04665 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREAZ_RS04670 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04690 PF00271 Helicase conserved C-terminal domain TREAZ_RS04690 PF09382 RQC domain TREAZ_RS04690 PF16124 RecQ zinc-binding TREAZ_RS04690 PF00270 DEAD/DEAH box helicase TREAZ_RS04690 PF00570 HRDC domain TREAZ_RS04695 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREAZ_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04705 PF00005 ABC transporter TREAZ_RS04720 PF00501 AMP-binding enzyme TREAZ_RS04720 PF14535 AMP-binding enzyme C-terminal domain TREAZ_RS04725 PF00005 ABC transporter TREAZ_RS04730 PF00005 ABC transporter TREAZ_RS04730 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREAZ_RS04740 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS04745 PF13458 Periplasmic binding protein TREAZ_RS04750 PF02082 Transcriptional regulator TREAZ_RS04755 PF02082 Transcriptional regulator TREAZ_RS04760 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS04765 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS04770 PF01593 Flavin containing amine oxidoreductase TREAZ_RS04780 PF06071 Protein of unknown function (DUF933) TREAZ_RS04780 PF01926 50S ribosome-binding GTPase TREAZ_RS04785 PF09382 RQC domain TREAZ_RS04785 PF16124 RecQ zinc-binding TREAZ_RS04785 PF00570 HRDC domain TREAZ_RS04785 PF00271 Helicase conserved C-terminal domain TREAZ_RS04785 PF00270 DEAD/DEAH box helicase TREAZ_RS04795 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain TREAZ_RS04795 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain TREAZ_RS04815 PF00155 Aminotransferase class I and II TREAZ_RS04820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TREAZ_RS04820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TREAZ_RS04825 PF02774 Semialdehyde dehydrogenase, dimerisation domain TREAZ_RS04825 PF01118 Semialdehyde dehydrogenase, NAD binding domain TREAZ_RS04835 PF00701 Dihydrodipicolinate synthetase family TREAZ_RS04840 PF05173 Dihydrodipicolinate reductase, C-terminus TREAZ_RS04840 PF01113 Dihydrodipicolinate reductase, N-terminus TREAZ_RS04845 PF00696 Amino acid kinase family TREAZ_RS04845 PF01842 ACT domain TREAZ_RS04855 PF00773 RNB domain TREAZ_RS04870 PF01627 Hpt domain TREAZ_RS04870 PF02895 Signal transducing histidine kinase, homodimeric domain TREAZ_RS04870 PF07194 P2 response regulator binding domain TREAZ_RS04870 PF01584 CheW-like domain TREAZ_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS04875 PF01584 CheW-like domain TREAZ_RS04900 PF00471 Ribosomal protein L33 TREAZ_RS04910 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TREAZ_RS04915 PF00467 KOW motif TREAZ_RS04915 PF02357 Transcription termination factor nusG TREAZ_RS04920 PF03946 Ribosomal protein L11, N-terminal domain TREAZ_RS04920 PF00298 Ribosomal protein L11, RNA binding domain TREAZ_RS04925 PF00687 Ribosomal protein L1p/L10e family TREAZ_RS04930 PF00466 Ribosomal protein L10 TREAZ_RS04935 PF16320 Ribosomal protein L7/L12 dimerisation domain TREAZ_RS04935 PF00542 Ribosomal protein L7/L12 C-terminal domain TREAZ_RS04940 PF04565 RNA polymerase Rpb2, domain 3 TREAZ_RS04940 PF04563 RNA polymerase beta subunit TREAZ_RS04940 PF04561 RNA polymerase Rpb2, domain 2 TREAZ_RS04940 PF10385 RNA polymerase beta subunit external 1 domain TREAZ_RS04940 PF00562 RNA polymerase Rpb2, domain 6 TREAZ_RS04940 PF04560 RNA polymerase Rpb2, domain 7 TREAZ_RS04950 PF00005 ABC transporter TREAZ_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS04960 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREAZ_RS04980 PF00403 Heavy-metal-associated domain TREAZ_RS04995 PF00005 ABC transporter TREAZ_RS05000 PF00950 ABC 3 transport family TREAZ_RS05005 PF17746 SfsA N-terminal OB domain TREAZ_RS05005 PF03749 Sugar fermentation stimulation protein RE domain TREAZ_RS05020 PF00923 Transaldolase/Fructose-6-phosphate aldolase TREAZ_RS05030 PF00005 ABC transporter TREAZ_RS05035 PF00005 ABC transporter TREAZ_RS05040 PF02361 Cobalt transport protein TREAZ_RS05055 PF00271 Helicase conserved C-terminal domain TREAZ_RS05055 PF02151 UvrB/uvrC motif TREAZ_RS05055 PF04851 Type III restriction enzyme, res subunit TREAZ_RS05055 PF12344 Ultra-violet resistance protein B TREAZ_RS05055 PF17757 UvrB interaction domain TREAZ_RS05095 PF16353 Domain of unknown function(DUF4981) TREAZ_RS05095 PF02929 Beta galactosidase small chain TREAZ_RS05095 PF02837 Glycosyl hydrolases family 2, sugar binding domain TREAZ_RS05095 PF00703 Glycosyl hydrolases family 2 TREAZ_RS05095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TREAZ_RS05100 PF03129 Anticodon binding domain TREAZ_RS05100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREAZ_RS05100 PF04073 Aminoacyl-tRNA editing domain TREAZ_RS05165 PF00873 AcrB/AcrD/AcrF family TREAZ_RS05190 PF01048 Phosphorylase superfamily TREAZ_RS05200 PF01008 Initiation factor 2 subunit family TREAZ_RS05205 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TREAZ_RS05210 PF01039 Carboxyl transferase domain TREAZ_RS05215 PF02785 Biotin carboxylase C-terminal domain TREAZ_RS05215 PF00289 Biotin carboxylase, N-terminal domain TREAZ_RS05215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TREAZ_RS05220 PF00364 Biotin-requiring enzyme TREAZ_RS05225 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TREAZ_RS05225 PF12241 Trans-2-enoyl-CoA reductase catalytic region TREAZ_RS05225 PF07055 Enoyl reductase FAD binding domain TREAZ_RS05230 PF07977 FabA-like domain TREAZ_RS05235 PF00109 Beta-ketoacyl synthase, N-terminal domain TREAZ_RS05235 PF02801 Beta-ketoacyl synthase, C-terminal domain TREAZ_RS05245 PF00698 Acyl transferase domain TREAZ_RS05250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TREAZ_RS05250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TREAZ_RS05275 PF01165 Ribosomal protein S21 TREAZ_RS05280 PF01551 Peptidase family M23 TREAZ_RS05285 PF02272 DHHA1 domain TREAZ_RS05285 PF01368 DHH family TREAZ_RS05285 PF17768 RecJ OB domain TREAZ_RS05285 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TREAZ_RS05290 PF00591 Glycosyl transferase family, a/b domain TREAZ_RS05290 PF02885 Glycosyl transferase family, helical bundle domain TREAZ_RS05290 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TREAZ_RS05300 PF13186 Iron-sulfur cluster-binding domain TREAZ_RS05310 PF02348 Cytidylyltransferase TREAZ_RS05320 PF02655 ATP-grasp domain TREAZ_RS05320 PF00206 Lyase TREAZ_RS05325 PF01520 N-acetylmuramoyl-L-alanine amidase TREAZ_RS05335 PF04620 Flagellar filament outer layer protein Flaa TREAZ_RS05345 PF01554 MatE TREAZ_RS05350 PF00005 ABC transporter TREAZ_RS05350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS05355 PF00005 ABC transporter TREAZ_RS05355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS05370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS05395 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TREAZ_RS05395 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TREAZ_RS05410 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TREAZ_RS05420 PF13174 Tetratricopeptide repeat TREAZ_RS05420 PF13176 Tetratricopeptide repeat TREAZ_RS05425 PF01515 Phosphate acetyl/butaryl transferase TREAZ_RS05445 PF00919 Uncharacterized protein family UPF0004 TREAZ_RS05445 PF04055 Radical SAM superfamily TREAZ_RS05470 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TREAZ_RS05470 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TREAZ_RS05485 PF07732 Multicopper oxidase TREAZ_RS05485 PF07731 Multicopper oxidase TREAZ_RS05505 PF01497 Periplasmic binding protein TREAZ_RS05510 PF01032 FecCD transport family TREAZ_RS05515 PF01032 FecCD transport family TREAZ_RS05520 PF00005 ABC transporter TREAZ_RS05545 PF11799 impB/mucB/samB family C-terminal domain TREAZ_RS05545 PF00817 impB/mucB/samB family TREAZ_RS05545 PF11798 IMS family HHH motif TREAZ_RS05590 PF07238 PilZ domain TREAZ_RS05590 PF00535 Glycosyl transferase family 2 TREAZ_RS05600 PF03062 MBOAT, membrane-bound O-acyltransferase family TREAZ_RS05620 PF00722 Glycosyl hydrolases family 16 TREAZ_RS05675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREAZ_RS05710 PF00535 Glycosyl transferase family 2 TREAZ_RS05720 PF00149 Calcineurin-like phosphoesterase TREAZ_RS05730 PF00152 tRNA synthetases class II (D, K and N) TREAZ_RS05730 PF01336 OB-fold nucleic acid binding domain TREAZ_RS05735 PF01554 MatE TREAZ_RS05740 PF01554 MatE TREAZ_RS05755 PF00933 Glycosyl hydrolase family 3 N terminal domain TREAZ_RS05760 PF01479 S4 domain TREAZ_RS05760 PF00849 RNA pseudouridylate synthase TREAZ_RS05775 PF00248 Aldo/keto reductase family TREAZ_RS05780 PF04474 Protein of unknown function (DUF554) TREAZ_RS05805 PF00753 Metallo-beta-lactamase superfamily TREAZ_RS05805 PF16123 Hydroxyacylglutathione hydrolase C-terminus TREAZ_RS05810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TREAZ_RS05810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREAZ_RS05815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TREAZ_RS05815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREAZ_RS05820 PF00334 Nucleoside diphosphate kinase TREAZ_RS05825 PF03144 Elongation factor Tu domain 2 TREAZ_RS05825 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS05825 PF03764 Elongation factor G, domain IV TREAZ_RS05825 PF14492 Elongation Factor G, domain II TREAZ_RS05825 PF00679 Elongation factor G C-terminus TREAZ_RS05830 PF04199 Putative cyclase TREAZ_RS05835 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS05835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS05835 PF09308 LuxQ, periplasmic TREAZ_RS05835 PF00072 Response regulator receiver domain TREAZ_RS05840 PF17762 HTH domain found in ParB protein TREAZ_RS05840 PF02195 ParB-like nuclease domain TREAZ_RS05845 PF00905 Penicillin binding protein transpeptidase domain TREAZ_RS05845 PF00912 Transglycosylase TREAZ_RS05845 PF17092 Penicillin-binding protein OB-like domain TREAZ_RS05860 PF01551 Peptidase family M23 TREAZ_RS05860 PF10145 Phage-related minor tail protein TREAZ_RS05860 PF01464 Transglycosylase SLT domain TREAZ_RS05865 PF13187 4Fe-4S dicluster domain TREAZ_RS05895 PF00248 Aldo/keto reductase family TREAZ_RS05900 PF00248 Aldo/keto reductase family TREAZ_RS05925 PF00012 Hsp70 protein TREAZ_RS05930 PF00012 Hsp70 protein TREAZ_RS05970 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS05970 PF00072 Response regulator receiver domain TREAZ_RS06015 PF01555 DNA methylase TREAZ_RS06040 PF00717 Peptidase S24-like TREAZ_RS06040 PF01726 LexA DNA binding domain TREAZ_RS06055 PF01336 OB-fold nucleic acid binding domain TREAZ_RS06055 PF07733 Bacterial DNA polymerase III alpha NTPase domain TREAZ_RS06055 PF02811 PHP domain TREAZ_RS06055 PF14579 Helix-hairpin-helix motif TREAZ_RS06055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TREAZ_RS06145 PF07944 Beta-L-arabinofuranosidase, GH127 TREAZ_RS06160 PF01676 Metalloenzyme superfamily TREAZ_RS06160 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TREAZ_RS06175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TREAZ_RS06175 PF02142 MGS-like domain TREAZ_RS06175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TREAZ_RS06180 PF00117 Glutamine amidotransferase class-I TREAZ_RS06180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TREAZ_RS06190 PF00480 ROK family TREAZ_RS06200 PF13580 SIS domain TREAZ_RS06215 PF13407 Periplasmic binding protein domain TREAZ_RS06220 PF00005 ABC transporter TREAZ_RS06225 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS06230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS06230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS06235 PF00180 Isocitrate/isopropylmalate dehydrogenase TREAZ_RS06240 PF02594 Uncharacterised ACR, YggU family COG1872 TREAZ_RS06260 PF00753 Metallo-beta-lactamase superfamily TREAZ_RS06275 PF03193 RsgA GTPase TREAZ_RS06275 PF16745 RsgA N-terminal domain TREAZ_RS06280 PF00488 MutS domain V TREAZ_RS06280 PF01713 Smr domain TREAZ_RS06285 PF02056 Family 4 glycosyl hydrolase TREAZ_RS06285 PF11975 Family 4 glycosyl hydrolase C-terminal domain TREAZ_RS06295 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS06300 PF01261 Xylose isomerase-like TIM barrel TREAZ_RS06305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS06305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS06315 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS06330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS06345 PF00248 Aldo/keto reductase family TREAZ_RS06365 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06380 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS06395 PF01316 Arginine repressor, DNA binding domain TREAZ_RS06395 PF02863 Arginine repressor, C-terminal domain TREAZ_RS06400 PF00342 Phosphoglucose isomerase TREAZ_RS06415 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06460 PF05167 Uncharacterised ACR (DUF711) TREAZ_RS06465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS06465 PF00005 ABC transporter TREAZ_RS06470 PF00005 ABC transporter TREAZ_RS06470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS06475 PF12911 N-terminal TM domain of oligopeptide transport permease C TREAZ_RS06475 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS06485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS06510 PF00672 HAMP domain TREAZ_RS06510 PF02743 Cache domain TREAZ_RS06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS06520 PF00294 pfkB family carbohydrate kinase TREAZ_RS06530 PF05257 CHAP domain TREAZ_RS06530 PF01476 LysM domain TREAZ_RS06535 PF03979 Sigma-70 factor, region 1.1 TREAZ_RS06535 PF04539 Sigma-70 region 3 TREAZ_RS06535 PF04542 Sigma-70 region 2 TREAZ_RS06535 PF00140 Sigma-70 factor, region 1.2 TREAZ_RS06535 PF04545 Sigma-70, region 4 TREAZ_RS06540 PF00005 ABC transporter TREAZ_RS06555 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TREAZ_RS06555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TREAZ_RS06565 PF16811 TRAP transporter T-component TREAZ_RS06570 PF00929 Exonuclease TREAZ_RS06575 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TREAZ_RS06575 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TREAZ_RS06575 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TREAZ_RS06575 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TREAZ_RS06585 PF02436 Conserved carboxylase domain TREAZ_RS06585 PF00682 HMGL-like TREAZ_RS06590 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TREAZ_RS06595 PF09308 LuxQ, periplasmic TREAZ_RS06595 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS06595 PF00072 Response regulator receiver domain TREAZ_RS06600 PF01590 GAF domain TREAZ_RS06600 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS06600 PF00360 Phytochrome region TREAZ_RS06600 PF00563 EAL domain TREAZ_RS06610 PF04055 Radical SAM superfamily TREAZ_RS06610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TREAZ_RS06620 PF03099 Biotin/lipoate A/B protein ligase family TREAZ_RS06635 PF05698 Bacterial trigger factor protein (TF) C-terminus TREAZ_RS06640 PF11849 Domain of unknown function (DUF3369) TREAZ_RS06645 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TREAZ_RS06650 PF01238 Phosphomannose isomerase type I TREAZ_RS06660 PF00453 Ribosomal protein L20 TREAZ_RS06665 PF01632 Ribosomal protein L35 TREAZ_RS06670 PF05198 Translation initiation factor IF-3, N-terminal domain TREAZ_RS06670 PF00707 Translation initiation factor IF-3, C-terminal domain TREAZ_RS06685 PF01116 Fructose-bisphosphate aldolase class-II TREAZ_RS06715 PF02381 MraZ protein, putative antitoxin-like TREAZ_RS06720 PF01795 MraW methylase family TREAZ_RS06730 PF01225 Mur ligase family, catalytic domain TREAZ_RS06730 PF08245 Mur ligase middle domain TREAZ_RS06730 PF02875 Mur ligase family, glutamate ligase domain TREAZ_RS06735 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TREAZ_RS06735 PF00953 Glycosyl transferase family 4 TREAZ_RS06740 PF01098 Cell cycle protein TREAZ_RS06750 PF02491 SHS2 domain inserted in FTSA TREAZ_RS06755 PF00091 Tubulin/FtsZ family, GTPase domain TREAZ_RS06755 PF12327 FtsZ family, C-terminal domain TREAZ_RS06760 PF02899 Phage integrase, N-terminal SAM-like domain TREAZ_RS06760 PF00589 Phage integrase family TREAZ_RS06770 PF02481 DNA recombination-mediator protein A TREAZ_RS06770 PF17782 DprA winged helix domain TREAZ_RS06775 PF01131 DNA topoisomerase TREAZ_RS06775 PF01751 Toprim domain TREAZ_RS06775 PF01396 Topoisomerase DNA binding C4 zinc finger TREAZ_RS06780 PF02899 Phage integrase, N-terminal SAM-like domain TREAZ_RS06780 PF00589 Phage integrase family TREAZ_RS06785 PF00227 Proteasome subunit TREAZ_RS06790 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS06790 PF07724 AAA domain (Cdc48 subfamily) TREAZ_RS06800 PF00460 Flagella basal body rod protein TREAZ_RS06800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREAZ_RS06805 PF02049 Flagellar hook-basal body complex protein FliE TREAZ_RS06810 PF08345 Flagellar M-ring protein C-terminal TREAZ_RS06810 PF01514 Secretory protein of YscJ/FliF family TREAZ_RS06815 PF14842 FliG N-terminal domain TREAZ_RS06815 PF14841 FliG middle domain TREAZ_RS06815 PF01706 FliG C-terminal domain TREAZ_RS06820 PF02108 Flagellar assembly protein FliH TREAZ_RS06825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS06825 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS06825 PF18269 T3SS EscN ATPase C-terminal domain TREAZ_RS06835 PF02824 TGS domain TREAZ_RS06835 PF03129 Anticodon binding domain TREAZ_RS06835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREAZ_RS06835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREAZ_RS06840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TREAZ_RS06840 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TREAZ_RS06840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TREAZ_RS06845 PF00857 Isochorismatase family TREAZ_RS06850 PF00072 Response regulator receiver domain TREAZ_RS06855 PF00672 HAMP domain TREAZ_RS06855 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS06855 PF01627 Hpt domain TREAZ_RS06855 PF00072 Response regulator receiver domain TREAZ_RS06855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS06860 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS06860 PF03472 Autoinducer binding domain TREAZ_RS06865 PF00072 Response regulator receiver domain TREAZ_RS06870 PF01627 Hpt domain TREAZ_RS06870 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS06870 PF00672 HAMP domain TREAZ_RS06870 PF00072 Response regulator receiver domain TREAZ_RS06870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS06870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS06885 PF00665 Integrase core domain TREAZ_RS06895 PF13186 Iron-sulfur cluster-binding domain TREAZ_RS06895 PF04055 Radical SAM superfamily TREAZ_RS06910 PF00691 OmpA family TREAZ_RS06915 PF14572 Phosphoribosyl synthetase-associated domain TREAZ_RS06915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TREAZ_RS06930 PF02308 MgtC family TREAZ_RS06940 PF16314 Domain of unknown function (DUF4954) TREAZ_RS06945 PF00330 Aconitase family (aconitate hydratase) TREAZ_RS06945 PF00694 Aconitase C-terminal domain TREAZ_RS06955 PF13419 Haloacid dehalogenase-like hydrolase TREAZ_RS06965 PF08241 Methyltransferase domain TREAZ_RS06980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TREAZ_RS06985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREAZ_RS06985 PF00381 PTS HPr component phosphorylation site TREAZ_RS06985 PF02896 PEP-utilising enzyme, TIM barrel domain TREAZ_RS06985 PF00391 PEP-utilising enzyme, mobile domain TREAZ_RS06985 PF05524 PEP-utilising enzyme, N-terminal TREAZ_RS06995 PF00849 RNA pseudouridylate synthase TREAZ_RS06995 PF01479 S4 domain TREAZ_RS07005 PF09210 Domain of unknown function (DUF1957) TREAZ_RS07005 PF03065 Glycosyl hydrolase family 57 TREAZ_RS07010 PF03687 Uncharacterised protein family (UPF0164) TREAZ_RS07060 PF12833 Helix-turn-helix domain TREAZ_RS07060 PF10114 Sensory domain found in PocR TREAZ_RS07065 PF13407 Periplasmic binding protein domain TREAZ_RS07070 PF00005 ABC transporter TREAZ_RS07075 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS07090 PF01546 Peptidase family M20/M25/M40 TREAZ_RS07090 PF07687 Peptidase dimerisation domain TREAZ_RS07095 PF01584 CheW-like domain TREAZ_RS07105 PF01513 ATP-NAD kinase TREAZ_RS07110 PF02463 RecF/RecN/SMC N terminal domain TREAZ_RS07135 PF00072 Response regulator receiver domain TREAZ_RS07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS07135 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS07135 PF09308 LuxQ, periplasmic TREAZ_RS07140 PF00704 Glycosyl hydrolases family 18 TREAZ_RS07145 PF00440 Bacterial regulatory proteins, tetR family TREAZ_RS07155 PF17131 Outer membrane lipoprotein-sorting protein TREAZ_RS07195 PF05406 WGR domain TREAZ_RS07230 PF01966 HD domain TREAZ_RS07260 PF05762 VWA domain containing CoxE-like protein TREAZ_RS07270 PF07728 AAA domain (dynein-related subfamily) TREAZ_RS07340 PF00365 Phosphofructokinase TREAZ_RS07345 PF00696 Amino acid kinase family TREAZ_RS07365 PF04542 Sigma-70 region 2 TREAZ_RS07365 PF04545 Sigma-70, region 4 TREAZ_RS07365 PF04539 Sigma-70 region 3 TREAZ_RS07370 PF01406 tRNA synthetases class I (C) catalytic domain TREAZ_RS07370 PF09190 DALR domain TREAZ_RS07375 PF01565 FAD binding domain TREAZ_RS07375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TREAZ_RS07385 PF13545 Crp-like helix-turn-helix domain TREAZ_RS07385 PF00027 Cyclic nucleotide-binding domain TREAZ_RS07405 PF07724 AAA domain (Cdc48 subfamily) TREAZ_RS07405 PF17871 AAA lid domain TREAZ_RS07405 PF02861 Clp amino terminal domain, pathogenicity island component TREAZ_RS07405 PF10431 C-terminal, D2-small domain, of ClpB protein TREAZ_RS07405 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS07410 PF00483 Nucleotidyl transferase TREAZ_RS07415 PF00271 Helicase conserved C-terminal domain TREAZ_RS07415 PF00270 DEAD/DEAH box helicase TREAZ_RS07415 PF09369 Domain of unknown function (DUF1998) TREAZ_RS07435 PF13673 Acetyltransferase (GNAT) domain TREAZ_RS07440 PF00271 Helicase conserved C-terminal domain TREAZ_RS07440 PF18074 Primosomal protein N C-terminal domain TREAZ_RS07440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TREAZ_RS07440 PF00270 DEAD/DEAH box helicase TREAZ_RS07440 PF17764 3′ DNA-binding domain (3′BD) TREAZ_RS07460 PF06463 Molybdenum Cofactor Synthesis C TREAZ_RS07460 PF04055 Radical SAM superfamily TREAZ_RS07475 PF03477 ATP cone domain TREAZ_RS07480 PF02056 Family 4 glycosyl hydrolase TREAZ_RS07480 PF11975 Family 4 glycosyl hydrolase C-terminal domain TREAZ_RS07485 PF00534 Glycosyl transferases group 1 TREAZ_RS07485 PF13439 Glycosyltransferase Family 4 TREAZ_RS07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS07500 PF00672 HAMP domain TREAZ_RS07500 PF02743 Cache domain TREAZ_RS07505 PF03358 NADPH-dependent FMN reductase TREAZ_RS07510 PF02190 ATP-dependent protease La (LON) substrate-binding domain TREAZ_RS07510 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS07510 PF05362 Lon protease (S16) C-terminal proteolytic domain TREAZ_RS07515 PF06689 ClpX C4-type zinc finger TREAZ_RS07515 PF07724 AAA domain (Cdc48 subfamily) TREAZ_RS07515 PF10431 C-terminal, D2-small domain, of ClpB protein TREAZ_RS07520 PF00574 Clp protease TREAZ_RS07525 PF05697 Bacterial trigger factor protein (TF) TREAZ_RS07525 PF05698 Bacterial trigger factor protein (TF) C-terminus TREAZ_RS07525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREAZ_RS07535 PF07155 ECF-type riboflavin transporter, S component TREAZ_RS07540 PF00005 ABC transporter TREAZ_RS07540 PF12558 ATP-binding cassette cobalt transporter TREAZ_RS07550 PF13173 AAA domain TREAZ_RS07550 PF13635 Domain of unknown function (DUF4143) TREAZ_RS07575 PF01063 Amino-transferase class IV TREAZ_RS07585 PF02682 Carboxyltransferase domain, subdomain C and D TREAZ_RS07590 PF02626 Carboxyltransferase domain, subdomain A and B TREAZ_RS07595 PF07286 Protein of unknown function (DUF1445) TREAZ_RS07600 PF03746 LamB/YcsF family TREAZ_RS07610 PF00460 Flagella basal body rod protein TREAZ_RS07610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREAZ_RS07615 PF00460 Flagella basal body rod protein TREAZ_RS07615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREAZ_RS07650 PF00398 Ribosomal RNA adenine dimethylase TREAZ_RS07655 PF01168 Alanine racemase, N-terminal domain TREAZ_RS07665 PF00849 RNA pseudouridylate synthase TREAZ_RS07675 PF00849 RNA pseudouridylate synthase TREAZ_RS07675 PF01479 S4 domain TREAZ_RS07680 PF08245 Mur ligase middle domain TREAZ_RS07680 PF02875 Mur ligase family, glutamate ligase domain TREAZ_RS07685 PF01225 Mur ligase family, catalytic domain TREAZ_RS07685 PF08245 Mur ligase middle domain TREAZ_RS07685 PF02875 Mur ligase family, glutamate ligase domain TREAZ_RS07690 PF08340 Domain of unknown function (DUF1732) TREAZ_RS07690 PF03755 YicC-like family, N-terminal region TREAZ_RS07715 PF02397 Bacterial sugar transferase TREAZ_RS07720 PF01869 BadF/BadG/BcrA/BcrD ATPase family TREAZ_RS07730 PF01066 CDP-alcohol phosphatidyltransferase TREAZ_RS07730 PF00483 Nucleotidyl transferase TREAZ_RS07740 PF02096 60Kd inner membrane protein TREAZ_RS07780 PF02096 60Kd inner membrane protein TREAZ_RS07780 PF14849 YidC periplasmic domain TREAZ_RS07795 PF01370 NAD dependent epimerase/dehydratase family TREAZ_RS07800 PF00288 GHMP kinases N terminal domain TREAZ_RS07800 PF08544 GHMP kinases C terminal TREAZ_RS07805 PF08645 Polynucleotide kinase 3 phosphatase TREAZ_RS07810 PF01501 Glycosyl transferase family 8 TREAZ_RS07810 PF00535 Glycosyl transferase family 2 TREAZ_RS07825 PF00535 Glycosyl transferase family 2 TREAZ_RS07840 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TREAZ_RS07840 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TREAZ_RS07840 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TREAZ_RS07845 PF00270 DEAD/DEAH box helicase TREAZ_RS07845 PF17191 RecG wedge domain TREAZ_RS07845 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TREAZ_RS07855 PF01761 3-dehydroquinate synthase TREAZ_RS07865 PF01799 [2Fe-2S] binding domain TREAZ_RS07865 PF00111 2Fe-2S iron-sulfur cluster binding domain TREAZ_RS07875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREAZ_RS07880 PF02719 Polysaccharide biosynthesis protein TREAZ_RS07895 PF03330 Lytic transglycolase TREAZ_RS07900 PF07517 SecA DEAD-like domain TREAZ_RS07900 PF02810 SEC-C motif TREAZ_RS07900 PF01043 SecA preprotein cross-linking domain TREAZ_RS07900 PF07516 SecA Wing and Scaffold domain TREAZ_RS07915 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TREAZ_RS07935 PF00005 ABC transporter TREAZ_RS07935 PF08402 TOBE domain TREAZ_RS07955 PF03853 YjeF-related protein N-terminus TREAZ_RS07955 PF01256 Carbohydrate kinase TREAZ_RS07970 PF00293 NUDIX domain TREAZ_RS07990 PF04055 Radical SAM superfamily TREAZ_RS08005 PF13847 Methyltransferase domain TREAZ_RS08015 PF01250 Ribosomal protein S6 TREAZ_RS08020 PF00436 Single-strand binding protein family TREAZ_RS08025 PF01084 Ribosomal protein S18 TREAZ_RS08035 PF01281 Ribosomal protein L9, N-terminal domain TREAZ_RS08035 PF03948 Ribosomal protein L9, C-terminal domain TREAZ_RS08040 PF00772 DnaB-like helicase N terminal domain TREAZ_RS08040 PF03796 DnaB-like helicase C terminal domain TREAZ_RS08060 PF02163 Peptidase family M50 TREAZ_RS08060 PF17820 PDZ domain TREAZ_RS08065 PF13288 DXP reductoisomerase C-terminal domain TREAZ_RS08065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TREAZ_RS08065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TREAZ_RS08075 PF01255 Putative undecaprenyl diphosphate synthase TREAZ_RS08080 PF01765 Ribosome recycling factor TREAZ_RS08085 PF00889 Elongation factor TS TREAZ_RS08090 PF00318 Ribosomal protein S2 TREAZ_RS08095 PF02545 Maf-like protein TREAZ_RS08215 PF00589 Phage integrase family TREAZ_RS08215 PF13495 Phage integrase, N-terminal SAM-like domain TREAZ_RS08225 PF13307 Helicase C-terminal domain TREAZ_RS08225 PF06733 DEAD_2 TREAZ_RS08235 PF02082 Transcriptional regulator TREAZ_RS08245 PF13333 Integrase core domain TREAZ_RS08245 PF00665 Integrase core domain TREAZ_RS08245 PF13276 HTH-like domain TREAZ_RS08300 PF01042 Endoribonuclease L-PSP TREAZ_RS08310 PF02390 Putative methyltransferase TREAZ_RS08315 PF00533 BRCA1 C Terminus (BRCT) domain TREAZ_RS08315 PF01653 NAD-dependent DNA ligase adenylation domain TREAZ_RS08315 PF03120 NAD-dependent DNA ligase OB-fold domain TREAZ_RS08320 PF08482 ATP-dependent helicase C-terminal TREAZ_RS08320 PF04408 Helicase associated domain (HA2) TREAZ_RS08320 PF00271 Helicase conserved C-terminal domain TREAZ_RS08320 PF00270 DEAD/DEAH box helicase TREAZ_RS08330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS08330 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS08330 PF01627 Hpt domain TREAZ_RS08330 PF00072 Response regulator receiver domain TREAZ_RS08340 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS08345 PF00005 ABC transporter TREAZ_RS08350 PF03313 Serine dehydratase alpha chain TREAZ_RS08370 PF02223 Thymidylate kinase TREAZ_RS08385 PF07244 Surface antigen variable number repeat TREAZ_RS08385 PF01103 Surface antigen TREAZ_RS08395 PF05188 MutS domain II TREAZ_RS08395 PF00488 MutS domain V TREAZ_RS08395 PF01624 MutS domain I TREAZ_RS08395 PF05190 MutS family domain IV TREAZ_RS08395 PF05192 MutS domain III TREAZ_RS08405 PF02743 Cache domain TREAZ_RS08405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS08405 PF00672 HAMP domain TREAZ_RS08410 PF02576 RimP N-terminal domain TREAZ_RS08410 PF17384 RimP C-terminal SH3 domain TREAZ_RS08415 PF08529 NusA N-terminal domain TREAZ_RS08415 PF13184 NusA-like KH domain TREAZ_RS08415 PF00575 S1 RNA binding domain TREAZ_RS08420 PF11987 Translation-initiation factor 2 TREAZ_RS08420 PF04760 Translation initiation factor IF-2, N-terminal region TREAZ_RS08420 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS08425 PF02033 Ribosome-binding factor A TREAZ_RS08430 PF01509 TruB family pseudouridylate synthase (N terminal domain) TREAZ_RS08435 PF00312 Ribosomal protein S15 TREAZ_RS08440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TREAZ_RS08440 PF03725 3' exoribonuclease family, domain 2 TREAZ_RS08440 PF01138 3' exoribonuclease family, domain 1 TREAZ_RS08440 PF00575 S1 RNA binding domain TREAZ_RS08440 PF00013 KH domain TREAZ_RS08445 PF00692 dUTPase TREAZ_RS08460 PF01702 Queuine tRNA-ribosyltransferase TREAZ_RS08470 PF12833 Helix-turn-helix domain TREAZ_RS08470 PF17853 GGDEF-like domain TREAZ_RS08490 PF00834 Ribulose-phosphate 3 epimerase family TREAZ_RS08510 PF02580 D-Tyr-tRNA(Tyr) deacylase TREAZ_RS08520 PF00005 ABC transporter TREAZ_RS08550 PF03781 Sulfatase-modifying factor enzyme 1 TREAZ_RS08560 PF14572 Phosphoribosyl synthetase-associated domain TREAZ_RS08560 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TREAZ_RS08565 PF00154 recA bacterial DNA recombination protein TREAZ_RS08570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TREAZ_RS08580 PF02616 Segregation and condensation protein ScpA TREAZ_RS08585 PF04079 Segregation and condensation complex subunit ScpB TREAZ_RS08590 PF00849 RNA pseudouridylate synthase TREAZ_RS08590 PF01479 S4 domain TREAZ_RS08595 PF00575 S1 RNA binding domain TREAZ_RS08600 PF00158 Sigma-54 interaction domain TREAZ_RS08600 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS08600 PF13185 GAF domain TREAZ_RS08620 PF00872 Transposase, Mutator family TREAZ_RS08645 PF02386 Cation transport protein TREAZ_RS08650 PF02899 Phage integrase, N-terminal SAM-like domain TREAZ_RS08650 PF00589 Phage integrase family TREAZ_RS08660 PF01098 Cell cycle protein TREAZ_RS08665 PF03717 Penicillin-binding Protein dimerisation domain TREAZ_RS08665 PF00905 Penicillin binding protein transpeptidase domain TREAZ_RS08675 PF04085 rod shape-determining protein MreC TREAZ_RS08700 PF04545 Sigma-70, region 4 TREAZ_RS08700 PF03979 Sigma-70 factor, region 1.1 TREAZ_RS08700 PF04539 Sigma-70 region 3 TREAZ_RS08700 PF04542 Sigma-70 region 2 TREAZ_RS08700 PF00140 Sigma-70 factor, region 1.2 TREAZ_RS08705 PF10410 DnaB-helicase binding domain of primase TREAZ_RS08705 PF08275 DNA primase catalytic core, N-terminal domain TREAZ_RS08705 PF01807 CHC2 zinc finger TREAZ_RS08710 PF02618 YceG-like family TREAZ_RS08725 PF02547 Queuosine biosynthesis protein TREAZ_RS08730 PF17864 RuvB AAA lid domain TREAZ_RS08730 PF05491 RuvB C-terminal winged helix domain TREAZ_RS08730 PF05496 Holliday junction DNA helicase RuvB P-loop domain TREAZ_RS08735 PF01330 RuvA N terminal domain TREAZ_RS08755 PF02075 Crossover junction endodeoxyribonuclease RuvC TREAZ_RS08760 PF01709 Transcriptional regulator TREAZ_RS08770 PF08666 SAF domain TREAZ_RS08770 PF03102 NeuB family TREAZ_RS08780 PF13393 Histidyl-tRNA synthetase TREAZ_RS08785 PF00155 Aminotransferase class I and II TREAZ_RS08790 PF13685 Iron-containing alcohol dehydrogenase TREAZ_RS08800 PF03447 Homoserine dehydrogenase, NAD binding domain TREAZ_RS08800 PF13840 ACT domain TREAZ_RS08800 PF00696 Amino acid kinase family TREAZ_RS08800 PF00742 Homoserine dehydrogenase TREAZ_RS08800 PF01842 ACT domain TREAZ_RS08805 PF01022 Bacterial regulatory protein, arsR family TREAZ_RS08810 PF00266 Aminotransferase class-V TREAZ_RS08815 PF02568 Thiamine biosynthesis protein (ThiI) TREAZ_RS08815 PF02926 THUMP domain TREAZ_RS08835 PF01975 Survival protein SurE TREAZ_RS08840 PF10509 Galactokinase galactose-binding signature TREAZ_RS08840 PF08544 GHMP kinases C terminal TREAZ_RS08845 PF02743 Cache domain TREAZ_RS08845 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS08845 PF00672 HAMP domain TREAZ_RS08850 PF03358 NADPH-dependent FMN reductase TREAZ_RS08860 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS08865 PF02237 Biotin protein ligase C terminal domain TREAZ_RS08865 PF03099 Biotin/lipoate A/B protein ligase family TREAZ_RS08870 PF02632 BioY family TREAZ_RS08875 PF00005 ABC transporter TREAZ_RS08915 PF00005 ABC transporter TREAZ_RS08915 PF08402 TOBE domain TREAZ_RS08940 PF00248 Aldo/keto reductase family TREAZ_RS08945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TREAZ_RS08945 PF02896 PEP-utilising enzyme, TIM barrel domain TREAZ_RS08945 PF00391 PEP-utilising enzyme, mobile domain TREAZ_RS08950 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TREAZ_RS08950 PF00271 Helicase conserved C-terminal domain TREAZ_RS08950 PF00270 DEAD/DEAH box helicase TREAZ_RS08950 PF04408 Helicase associated domain (HA2) TREAZ_RS08980 PF00072 Response regulator receiver domain TREAZ_RS08980 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS08985 PF00672 HAMP domain TREAZ_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS08985 PF07730 Histidine kinase TREAZ_RS09000 PF06969 HemN C-terminal domain TREAZ_RS09000 PF04055 Radical SAM superfamily TREAZ_RS09010 PF10502 Signal peptidase, peptidase S26 TREAZ_RS09015 PF03781 Sulfatase-modifying factor enzyme 1 TREAZ_RS09015 PF08308 PEGA domain TREAZ_RS09020 PF01668 SmpB protein TREAZ_RS09080 PF00005 ABC transporter TREAZ_RS09080 PF13732 Domain of unknown function (DUF4162) TREAZ_RS09085 PF00753 Metallo-beta-lactamase superfamily TREAZ_RS09085 PF12706 Beta-lactamase superfamily domain TREAZ_RS09145 PF00271 Helicase conserved C-terminal domain TREAZ_RS09145 PF00176 SNF2 family N-terminal domain TREAZ_RS09215 PF13443 Cro/C1-type HTH DNA-binding domain TREAZ_RS09245 PF13614 AAA domain TREAZ_RS09285 PF02899 Phage integrase, N-terminal SAM-like domain TREAZ_RS09285 PF00589 Phage integrase family TREAZ_RS09300 PF00072 Response regulator receiver domain TREAZ_RS09305 PF00672 HAMP domain TREAZ_RS09305 PF01966 HD domain TREAZ_RS09335 PF12002 MgsA AAA+ ATPase C terminal TREAZ_RS09335 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS09335 PF16193 AAA C-terminal domain TREAZ_RS09340 PF00890 FAD binding domain TREAZ_RS09340 PF03358 NADPH-dependent FMN reductase TREAZ_RS09340 PF04205 FMN-binding domain TREAZ_RS09350 PF07859 alpha/beta hydrolase fold TREAZ_RS09350 PF13472 GDSL-like Lipase/Acylhydrolase family TREAZ_RS09355 PF01554 MatE TREAZ_RS09360 PF00669 Bacterial flagellin N-terminal helical region TREAZ_RS09360 PF00700 Bacterial flagellin C-terminal helical region TREAZ_RS09365 PF00669 Bacterial flagellin N-terminal helical region TREAZ_RS09365 PF00700 Bacterial flagellin C-terminal helical region TREAZ_RS09375 PF02465 Flagellar hook-associated protein 2 N-terminus TREAZ_RS09375 PF07195 Flagellar hook-associated protein 2 C-terminus TREAZ_RS09395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TREAZ_RS09400 PF00814 Glycoprotease family TREAZ_RS09405 PF00672 HAMP domain TREAZ_RS09405 PF01966 HD domain TREAZ_RS09410 PF02599 Global regulator protein family TREAZ_RS09415 PF02623 FliW protein TREAZ_RS09420 PF00669 Bacterial flagellin N-terminal helical region TREAZ_RS09420 PF00700 Bacterial flagellin C-terminal helical region TREAZ_RS09425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREAZ_RS09425 PF07196 Flagellin hook IN motif TREAZ_RS09455 PF00589 Phage integrase family TREAZ_RS09455 PF12167 Arm DNA-binding domain TREAZ_RS09470 PF00665 Integrase core domain TREAZ_RS09475 PF00665 Integrase core domain TREAZ_RS09485 PF02811 PHP domain TREAZ_RS09485 PF07733 Bacterial DNA polymerase III alpha NTPase domain TREAZ_RS09485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TREAZ_RS09485 PF14579 Helix-hairpin-helix motif TREAZ_RS09490 PF00817 impB/mucB/samB family TREAZ_RS09490 PF11799 impB/mucB/samB family C-terminal domain TREAZ_RS09490 PF11798 IMS family HHH motif TREAZ_RS09535 PF02678 Pirin TREAZ_RS09535 PF17954 Quercetinase C-terminal cupin domain TREAZ_RS09550 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREAZ_RS09550 PF12838 4Fe-4S dicluster domain TREAZ_RS09550 PF13375 RnfC Barrel sandwich hybrid domain TREAZ_RS09560 PF09334 tRNA synthetases class I (M) TREAZ_RS09560 PF01588 Putative tRNA binding domain TREAZ_RS09565 PF09094 Domain of unknown function (DUF1925) TREAZ_RS09565 PF09095 Domain of unknown function (DUF1926) TREAZ_RS09565 PF03065 Glycosyl hydrolase family 57 TREAZ_RS09570 PF02508 Rnf-Nqr subunit, membrane protein TREAZ_RS09585 PF03116 NQR2, RnfD, RnfE family TREAZ_RS09590 PF12838 4Fe-4S dicluster domain TREAZ_RS09590 PF10531 SLBB domain TREAZ_RS09590 PF13375 RnfC Barrel sandwich hybrid domain TREAZ_RS09590 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREAZ_RS09605 PF00849 RNA pseudouridylate synthase TREAZ_RS09625 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TREAZ_RS09625 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TREAZ_RS09645 PF12627 Probable RNA and SrmB- binding site of polymerase A TREAZ_RS09645 PF12626 Polymerase A arginine-rich C-terminus TREAZ_RS09645 PF01743 Poly A polymerase head domain TREAZ_RS09655 PF05958 tRNA (Uracil-5-)-methyltransferase TREAZ_RS09670 PF00892 EamA-like transporter family TREAZ_RS09685 PF00872 Transposase, Mutator family TREAZ_RS09720 PF01209 ubiE/COQ5 methyltransferase family TREAZ_RS09725 PF04324 BFD-like [2Fe-2S] binding domain TREAZ_RS09725 PF01592 NifU-like N terminal domain TREAZ_RS09725 PF01106 NifU-like domain TREAZ_RS09730 PF00266 Aminotransferase class-V TREAZ_RS09735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TREAZ_RS09735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TREAZ_RS09735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TREAZ_RS09735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TREAZ_RS09755 PF01351 Ribonuclease HII TREAZ_RS09775 PF03372 Endonuclease/Exonuclease/phosphatase family TREAZ_RS09795 PF02617 ATP-dependent Clp protease adaptor protein ClpS TREAZ_RS09800 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS09800 PF10431 C-terminal, D2-small domain, of ClpB protein TREAZ_RS09800 PF02861 Clp amino terminal domain, pathogenicity island component TREAZ_RS09800 PF07724 AAA domain (Cdc48 subfamily) TREAZ_RS09800 PF17871 AAA lid domain TREAZ_RS09805 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TREAZ_RS09810 PF02127 Aminopeptidase I zinc metalloprotease (M18) TREAZ_RS09815 PF00749 tRNA synthetases class I (E and Q), catalytic domain TREAZ_RS09825 PF02146 Sir2 family TREAZ_RS09835 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS09835 PF00672 HAMP domain TREAZ_RS09840 PF01261 Xylose isomerase-like TIM barrel TREAZ_RS09845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREAZ_RS09845 PF00205 Thiamine pyrophosphate enzyme, central domain TREAZ_RS09845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREAZ_RS09850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS09850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS09890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS09890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS09895 PF01116 Fructose-bisphosphate aldolase class-II TREAZ_RS09905 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS09935 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS09940 PF02311 AraC-like ligand binding domain TREAZ_RS09940 PF12833 Helix-turn-helix domain TREAZ_RS09955 PF11975 Family 4 glycosyl hydrolase C-terminal domain TREAZ_RS09955 PF02056 Family 4 glycosyl hydrolase TREAZ_RS09985 PF03062 MBOAT, membrane-bound O-acyltransferase family TREAZ_RS09990 PF00501 AMP-binding enzyme TREAZ_RS09990 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10010 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS10025 PF02733 Dak1 domain TREAZ_RS10030 PF02734 DAK2 domain TREAZ_RS10035 PF02502 Ribose/Galactose Isomerase TREAZ_RS10040 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS10045 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10050 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10080 PF04545 Sigma-70, region 4 TREAZ_RS10080 PF04539 Sigma-70 region 3 TREAZ_RS10080 PF04542 Sigma-70 region 2 TREAZ_RS10090 PF10609 NUBPL iron-transfer P-loop NTPase TREAZ_RS10095 PF00448 SRP54-type protein, GTPase domain TREAZ_RS10100 PF00771 FHIPEP family TREAZ_RS10105 PF01312 FlhB HrpN YscU SpaS Family TREAZ_RS10110 PF01311 Bacterial export proteins, family 1 TREAZ_RS10115 PF01313 Bacterial export proteins, family 3 TREAZ_RS10120 PF00813 FliP family TREAZ_RS10130 PF04509 CheC-like family TREAZ_RS10130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TREAZ_RS10135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TREAZ_RS10135 PF02154 Flagellar motor switch protein FliM TREAZ_RS10140 PF03748 Flagellar basal body-associated protein FliL TREAZ_RS10145 PF13677 Membrane MotB of proton-channel complex MotA/MotB TREAZ_RS10145 PF00691 OmpA family TREAZ_RS10150 PF01618 MotA/TolQ/ExbB proton channel family TREAZ_RS10160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREAZ_RS10160 PF00460 Flagella basal body rod protein TREAZ_RS10160 PF07559 Flagellar basal body protein FlaE TREAZ_RS10165 PF03963 Flagellar hook capping protein - N-terminal region TREAZ_RS10185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS10185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS10190 PF01232 Mannitol dehydrogenase Rossmann domain TREAZ_RS10190 PF08125 Mannitol dehydrogenase C-terminal domain TREAZ_RS10195 PF13407 Periplasmic binding protein domain TREAZ_RS10200 PF04205 FMN-binding domain TREAZ_RS10205 PF00072 Response regulator receiver domain TREAZ_RS10205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS10205 PF01627 Hpt domain TREAZ_RS10205 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS10205 PF00672 HAMP domain TREAZ_RS10210 PF01725 Ham1 family TREAZ_RS10215 PF13361 UvrD-like helicase C-terminal domain TREAZ_RS10215 PF00580 UvrD/REP helicase N-terminal domain TREAZ_RS10220 PF18357 Diphteria toxin repressor SH3 domain TREAZ_RS10220 PF01325 Iron dependent repressor, N-terminal DNA binding domain TREAZ_RS10220 PF02742 Iron dependent repressor, metal binding and dimerisation domain TREAZ_RS10225 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TREAZ_RS10225 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TREAZ_RS10225 PF01189 16S rRNA methyltransferase RsmB/F TREAZ_RS10230 PF01416 tRNA pseudouridine synthase TREAZ_RS10240 PF01648 4'-phosphopantetheinyl transferase superfamily TREAZ_RS10250 PF02457 DisA bacterial checkpoint controller nucleotide-binding TREAZ_RS10255 PF00809 Pterin binding enzyme TREAZ_RS10260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TREAZ_RS10260 PF02779 Transketolase, pyrimidine binding domain TREAZ_RS10260 PF02780 Transketolase, C-terminal domain TREAZ_RS10300 PF01192 RNA polymerase Rpb6 TREAZ_RS10305 PF01145 SPFH domain / Band 7 family TREAZ_RS10310 PF01145 SPFH domain / Band 7 family TREAZ_RS10320 PF05681 Fumarate hydratase (Fumerase) TREAZ_RS10320 PF05683 Fumarase C-terminus TREAZ_RS10325 PF09297 NADH pyrophosphatase zinc ribbon domain TREAZ_RS10325 PF00293 NUDIX domain TREAZ_RS10325 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain TREAZ_RS10350 PF00133 tRNA synthetases class I (I, L, M and V) TREAZ_RS10350 PF08264 Anticodon-binding domain of tRNA TREAZ_RS10355 PF00730 HhH-GPD superfamily base excision DNA repair protein TREAZ_RS10355 PF00633 Helix-hairpin-helix motif TREAZ_RS10385 PF10672 S-adenosylmethionine-dependent methyltransferase TREAZ_RS10395 PF01197 Ribosomal protein L31 TREAZ_RS10400 PF07497 Rho termination factor, RNA-binding domain TREAZ_RS10400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS10400 PF07498 Rho termination factor, N-terminal domain TREAZ_RS10405 PF00994 Probable molybdopterin binding domain TREAZ_RS10405 PF18146 Damage-inducible protein CinA KH domain TREAZ_RS10405 PF02464 Competence-damaged protein TREAZ_RS10415 PF00072 Response regulator receiver domain TREAZ_RS10415 PF00486 Transcriptional regulatory protein, C terminal TREAZ_RS10420 PF00795 Carbon-nitrogen hydrolase TREAZ_RS10425 PF00216 Bacterial DNA-binding protein TREAZ_RS10430 PF01649 Ribosomal protein S20 TREAZ_RS10440 PF04551 GcpE protein TREAZ_RS10455 PF01813 ATP synthase subunit D TREAZ_RS10460 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS10460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS10465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS10465 PF16886 ATPsynthase alpha/beta subunit N-term extension TREAZ_RS10465 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS10475 PF01991 ATP synthase (E/31 kDa) subunit TREAZ_RS10480 PF01263 Aldose 1-epimerase TREAZ_RS10490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS10500 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS10500 PF00158 Sigma-54 interaction domain TREAZ_RS10500 PF00072 Response regulator receiver domain TREAZ_RS10505 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS10505 PF00989 PAS fold TREAZ_RS10505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS10505 PF13188 PAS domain TREAZ_RS10505 PF13426 PAS domain TREAZ_RS10510 PF09115 DNA polymerase III, delta subunit, C terminal TREAZ_RS10520 PF04101 Glycosyltransferase family 28 C-terminal domain TREAZ_RS10520 PF03033 Glycosyltransferase family 28 N-terminal domain TREAZ_RS10525 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS10545 PF02637 GatB domain TREAZ_RS10545 PF02934 GatB/GatE catalytic domain TREAZ_RS10550 PF01425 Amidase TREAZ_RS10560 PF04102 SlyX TREAZ_RS10565 PF05437 Branched-chain amino acid transport protein (AzlD) TREAZ_RS10570 PF03591 AzlC protein TREAZ_RS10575 PF02481 DNA recombination-mediator protein A TREAZ_RS10575 PF17782 DprA winged helix domain TREAZ_RS10580 PF01871 AMMECR1 TREAZ_RS10585 PF01242 6-pyruvoyl tetrahydropterin synthase TREAZ_RS10590 PF01225 Mur ligase family, catalytic domain TREAZ_RS10590 PF08245 Mur ligase middle domain TREAZ_RS10590 PF02875 Mur ligase family, glutamate ligase domain TREAZ_RS10600 PF02875 Mur ligase family, glutamate ligase domain TREAZ_RS10600 PF08245 Mur ligase middle domain TREAZ_RS10605 PF00152 tRNA synthetases class II (D, K and N) TREAZ_RS10615 PF08439 Oligopeptidase F TREAZ_RS10615 PF01432 Peptidase family M3 TREAZ_RS10635 PF01132 Elongation factor P (EF-P) OB domain TREAZ_RS10635 PF08207 Elongation factor P (EF-P) KOW-like domain TREAZ_RS10635 PF09285 Elongation factor P, C-terminal TREAZ_RS10645 PF00133 tRNA synthetases class I (I, L, M and V) TREAZ_RS10645 PF08264 Anticodon-binding domain of tRNA TREAZ_RS10645 PF13603 Leucyl-tRNA synthetase, Domain 2 TREAZ_RS10645 PF09334 tRNA synthetases class I (M) TREAZ_RS10655 PF08125 Mannitol dehydrogenase C-terminal domain TREAZ_RS10655 PF01232 Mannitol dehydrogenase Rossmann domain TREAZ_RS10665 PF00793 DAHP synthetase I family TREAZ_RS10665 PF18152 DAHP synthase ferredoxin-like domain TREAZ_RS10675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREAZ_RS10675 PF02403 Seryl-tRNA synthetase N-terminal domain TREAZ_RS10685 PF02237 Biotin protein ligase C terminal domain TREAZ_RS10685 PF08279 HTH domain TREAZ_RS10685 PF03099 Biotin/lipoate A/B protein ligase family TREAZ_RS10695 PF01926 50S ribosome-binding GTPase TREAZ_RS10695 PF07650 KH domain TREAZ_RS10730 PF00132 Bacterial transferase hexapeptide (six repeats) TREAZ_RS10740 PF01475 Ferric uptake regulator family TREAZ_RS10745 PF02915 Rubrerythrin TREAZ_RS10755 PF05336 L-rhamnose mutarotase TREAZ_RS10760 PF00005 ABC transporter TREAZ_RS10765 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS10770 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS10795 PF08494 DEAD/H associated TREAZ_RS10795 PF00270 DEAD/DEAH box helicase TREAZ_RS10795 PF00271 Helicase conserved C-terminal domain TREAZ_RS10800 PF01636 Phosphotransferase enzyme family TREAZ_RS10810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS10815 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS10820 PF00005 ABC transporter TREAZ_RS10825 PF00005 ABC transporter TREAZ_RS10825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS10830 PF00271 Helicase conserved C-terminal domain TREAZ_RS10830 PF08494 DEAD/H associated TREAZ_RS10830 PF00270 DEAD/DEAH box helicase TREAZ_RS10840 PF00072 Response regulator receiver domain TREAZ_RS10850 PF00005 ABC transporter TREAZ_RS10855 PF12704 MacB-like periplasmic core domain TREAZ_RS10855 PF02687 FtsX-like permease family TREAZ_RS10865 PF00448 SRP54-type protein, GTPase domain TREAZ_RS10865 PF02881 SRP54-type protein, helical bundle domain TREAZ_RS10875 PF03462 PCRF domain TREAZ_RS10875 PF00472 RF-1 domain TREAZ_RS10925 PF00571 CBS domain TREAZ_RS10925 PF03471 Transporter associated domain TREAZ_RS10930 PF02130 Uncharacterized protein family UPF0054 TREAZ_RS10935 PF07697 7TM-HD extracellular TREAZ_RS10935 PF07698 7TM receptor with intracellular HD hydrolase TREAZ_RS10935 PF01966 HD domain TREAZ_RS10940 PF02562 PhoH-like protein TREAZ_RS10945 PF03968 OstA-like protein TREAZ_RS10945 PF04453 LPS transport system D TREAZ_RS10950 PF00005 ABC transporter TREAZ_RS10950 PF17755 UvrA DNA-binding domain TREAZ_RS10950 PF17760 UvrA interaction domain TREAZ_RS10970 PF00171 Aldehyde dehydrogenase family TREAZ_RS10970 PF00465 Iron-containing alcohol dehydrogenase TREAZ_RS10975 PF00205 Thiamine pyrophosphate enzyme, central domain TREAZ_RS10975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREAZ_RS10975 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREAZ_RS10980 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10985 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS10995 PF13932 GidA associated domain TREAZ_RS10995 PF01134 Glucose inhibited division protein A TREAZ_RS11000 PF04205 FMN-binding domain TREAZ_RS11000 PF00890 FAD binding domain TREAZ_RS11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS11005 PF08669 Glycine cleavage T-protein C-terminal barrel domain TREAZ_RS11005 PF01571 Aminomethyltransferase folate-binding domain TREAZ_RS11005 PF17806 Sarcosine oxidase A3 domain TREAZ_RS11010 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS11010 PF00107 Zinc-binding dehydrogenase TREAZ_RS11020 PF02733 Dak1 domain TREAZ_RS11025 PF02734 DAK2 domain TREAZ_RS11030 PF02502 Ribose/Galactose Isomerase TREAZ_RS11040 PF01695 IstB-like ATP binding protein TREAZ_RS11055 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TREAZ_RS11065 PF01553 Acyltransferase TREAZ_RS11075 PF00271 Helicase conserved C-terminal domain TREAZ_RS11075 PF02559 CarD-like/TRCF domain TREAZ_RS11075 PF00270 DEAD/DEAH box helicase TREAZ_RS11075 PF03461 TRCF domain TREAZ_RS11075 PF17757 UvrB interaction domain TREAZ_RS11090 PF03551 Transcriptional regulator PadR-like family TREAZ_RS11100 PF02581 Thiamine monophosphate synthase TREAZ_RS11100 PF08543 Phosphomethylpyrimidine kinase TREAZ_RS11110 PF01026 TatD related DNase TREAZ_RS11115 PF02677 Epoxyqueuosine reductase QueH TREAZ_RS11125 PF00152 tRNA synthetases class II (D, K and N) TREAZ_RS11125 PF01336 OB-fold nucleic acid binding domain TREAZ_RS11130 PF07943 Penicillin-binding protein 5, C-terminal domain TREAZ_RS11130 PF00768 D-alanyl-D-alanine carboxypeptidase TREAZ_RS11145 PF01476 LysM domain TREAZ_RS11145 PF01551 Peptidase family M23 TREAZ_RS11145 PF08525 Opacity-associated protein A N-terminal motif TREAZ_RS11150 PF10502 Signal peptidase, peptidase S26 TREAZ_RS11155 PF00905 Penicillin binding protein transpeptidase domain TREAZ_RS11155 PF03717 Penicillin-binding Protein dimerisation domain TREAZ_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11175 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS11185 PF00155 Aminotransferase class I and II TREAZ_RS11200 PF01595 Cyclin M transmembrane N-terminal domain TREAZ_RS11200 PF03471 Transporter associated domain TREAZ_RS11200 PF00571 CBS domain TREAZ_RS11205 PF00270 DEAD/DEAH box helicase TREAZ_RS11205 PF00271 Helicase conserved C-terminal domain TREAZ_RS11215 PF00474 Sodium:solute symporter family TREAZ_RS11220 PF00255 Glutathione peroxidase TREAZ_RS11240 PF02887 Pyruvate kinase, alpha/beta domain TREAZ_RS11240 PF00224 Pyruvate kinase, barrel domain TREAZ_RS11240 PF00391 PEP-utilising enzyme, mobile domain TREAZ_RS11250 PF14535 AMP-binding enzyme C-terminal domain TREAZ_RS11250 PF00501 AMP-binding enzyme TREAZ_RS11280 PF14535 AMP-binding enzyme C-terminal domain TREAZ_RS11280 PF00501 AMP-binding enzyme TREAZ_RS11290 PF00534 Glycosyl transferases group 1 TREAZ_RS11290 PF08323 Starch synthase catalytic domain TREAZ_RS11295 PF00149 Calcineurin-like phosphoesterase TREAZ_RS11295 PF02872 5'-nucleotidase, C-terminal domain TREAZ_RS11300 PF04073 Aminoacyl-tRNA editing domain TREAZ_RS11310 PF00672 HAMP domain TREAZ_RS11310 PF17200 Single Cache domain 2 TREAZ_RS11310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS11315 PF00072 Response regulator receiver domain TREAZ_RS11315 PF01627 Hpt domain TREAZ_RS11315 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS11320 PF00781 Diacylglycerol kinase catalytic domain TREAZ_RS11360 PF16325 Peptidase family U32 C-terminal domain TREAZ_RS11360 PF01136 Peptidase family U32 TREAZ_RS11365 PF01139 tRNA-splicing ligase RtcB TREAZ_RS11370 PF00472 RF-1 domain TREAZ_RS11370 PF03462 PCRF domain TREAZ_RS11380 PF01048 Phosphorylase superfamily TREAZ_RS11385 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS11390 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS11395 PF00005 ABC transporter TREAZ_RS11400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS11405 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11410 PF12911 N-terminal TM domain of oligopeptide transport permease C TREAZ_RS11415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11415 PF00005 ABC transporter TREAZ_RS11420 PF00005 ABC transporter TREAZ_RS11420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11430 PF02608 ABC transporter substrate-binding protein PnrA-like TREAZ_RS11455 PF09383 NIL domain TREAZ_RS11455 PF00005 ABC transporter TREAZ_RS11460 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11465 PF03180 NLPA lipoprotein TREAZ_RS11470 PF04002 RadC-like JAB domain TREAZ_RS11475 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain TREAZ_RS11475 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain TREAZ_RS11475 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain TREAZ_RS11475 PF08531 Alpha-L-rhamnosidase N-terminal domain TREAZ_RS11480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TREAZ_RS11490 PF07238 PilZ domain TREAZ_RS11505 PF02190 ATP-dependent protease La (LON) substrate-binding domain TREAZ_RS11505 PF05362 Lon protease (S16) C-terminal proteolytic domain TREAZ_RS11505 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS11520 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS11525 PF01734 Patatin-like phospholipase TREAZ_RS11530 PF04055 Radical SAM superfamily TREAZ_RS11530 PF02579 Dinitrogenase iron-molybdenum cofactor TREAZ_RS11570 PF02127 Aminopeptidase I zinc metalloprotease (M18) TREAZ_RS11575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS11580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11580 PF00005 ABC transporter TREAZ_RS11585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11585 PF00005 ABC transporter TREAZ_RS11590 PF12911 N-terminal TM domain of oligopeptide transport permease C TREAZ_RS11590 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11595 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11600 PF00285 Citrate synthase, C-terminal domain TREAZ_RS11605 PF02554 Carbon starvation protein CstA TREAZ_RS11605 PF13722 5TM C-terminal transporter carbon starvation CstA TREAZ_RS11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS11610 PF17149 Periplasmic sensor domain found in signal transduction proteins TREAZ_RS11610 PF00072 Response regulator receiver domain TREAZ_RS11610 PF00672 HAMP domain TREAZ_RS11610 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS11610 PF01627 Hpt domain TREAZ_RS11650 PF14492 Elongation Factor G, domain II TREAZ_RS11650 PF00679 Elongation factor G C-terminus TREAZ_RS11650 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS11650 PF03144 Elongation factor Tu domain 2 TREAZ_RS11650 PF06421 GTP-binding protein LepA C-terminus TREAZ_RS11655 PF00771 FHIPEP family TREAZ_RS11660 PF17820 PDZ domain TREAZ_RS11660 PF13180 PDZ domain TREAZ_RS11670 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS11670 PF17862 AAA+ lid domain TREAZ_RS11670 PF01434 Peptidase family M41 TREAZ_RS11670 PF06480 FtsH Extracellular TREAZ_RS11680 PF14693 Ribosomal protein TL5, C-terminal domain TREAZ_RS11680 PF01386 Ribosomal L25p family TREAZ_RS11690 PF04026 SpoVG TREAZ_RS11695 PF00288 GHMP kinases N terminal domain TREAZ_RS11695 PF08544 GHMP kinases C terminal TREAZ_RS11715 PF01467 Cytidylyltransferase-like TREAZ_RS11720 PF01018 GTP1/OBG TREAZ_RS11720 PF01926 50S ribosome-binding GTPase TREAZ_RS11725 PF01016 Ribosomal L27 protein TREAZ_RS11735 PF00829 Ribosomal prokaryotic L21 protein TREAZ_RS11760 PF11975 Family 4 glycosyl hydrolase C-terminal domain TREAZ_RS11760 PF02056 Family 4 glycosyl hydrolase TREAZ_RS11770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11770 PF00005 ABC transporter TREAZ_RS11775 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11775 PF12911 N-terminal TM domain of oligopeptide transport permease C TREAZ_RS11780 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS11785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS11790 PF00005 ABC transporter TREAZ_RS11790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS11795 PF12833 Helix-turn-helix domain TREAZ_RS11800 PF00750 tRNA synthetases class I (R) TREAZ_RS11800 PF03485 Arginyl tRNA synthetase N terminal domain TREAZ_RS11800 PF05746 DALR anticodon binding domain TREAZ_RS11805 PF02578 Multi-copper polyphenol oxidoreductase laccase TREAZ_RS11845 PF01381 Helix-turn-helix TREAZ_RS11850 PF13579 Glycosyl transferase 4-like domain TREAZ_RS11850 PF00534 Glycosyl transferases group 1 TREAZ_RS11855 PF04041 beta-1,4-mannooligosaccharide phosphorylase TREAZ_RS11865 PF00156 Phosphoribosyl transferase domain TREAZ_RS11875 PF01176 Translation initiation factor 1A / IF-1 TREAZ_RS11900 PF00092 von Willebrand factor type A domain TREAZ_RS11910 PF01882 Protein of unknown function DUF58 TREAZ_RS11915 PF17863 AAA lid domain TREAZ_RS11915 PF07726 ATPase family associated with various cellular activities (AAA) TREAZ_RS11940 PF00365 Phosphofructokinase TREAZ_RS11950 PF01411 tRNA synthetases class II (A) TREAZ_RS11950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREAZ_RS11960 PF01029 NusB family TREAZ_RS11970 PF00166 Chaperonin 10 Kd subunit TREAZ_RS11975 PF04542 Sigma-70 region 2 TREAZ_RS11975 PF03979 Sigma-70 factor, region 1.1 TREAZ_RS11975 PF04545 Sigma-70, region 4 TREAZ_RS11975 PF04539 Sigma-70 region 3 TREAZ_RS11975 PF00140 Sigma-70 factor, region 1.2 TREAZ_RS11985 PF00455 DeoR C terminal sensor domain TREAZ_RS11985 PF08220 DeoR-like helix-turn-helix domain TREAZ_RS11990 PF02817 e3 binding domain TREAZ_RS11990 PF00364 Biotin-requiring enzyme TREAZ_RS11990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) TREAZ_RS11995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TREAZ_RS11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS12000 PF02780 Transketolase, C-terminal domain TREAZ_RS12000 PF02779 Transketolase, pyrimidine binding domain TREAZ_RS12010 PF00596 Class II Aldolase and Adducin N-terminal domain TREAZ_RS12015 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS12015 PF00107 Zinc-binding dehydrogenase TREAZ_RS12020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TREAZ_RS12020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TREAZ_RS12025 PF02805 Metal binding domain of Ada TREAZ_RS12025 PF12833 Helix-turn-helix domain TREAZ_RS12030 PF01554 MatE TREAZ_RS12040 PF00583 Acetyltransferase (GNAT) family TREAZ_RS12040 PF00696 Amino acid kinase family TREAZ_RS12045 PF02601 Exonuclease VII, large subunit TREAZ_RS12045 PF13742 OB-fold nucleic acid binding domain TREAZ_RS12050 PF02609 Exonuclease VII small subunit TREAZ_RS12055 PF08676 MutL C terminal dimerisation domain TREAZ_RS12055 PF01119 DNA mismatch repair protein, C-terminal domain TREAZ_RS12060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS12060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS12075 PF13180 PDZ domain TREAZ_RS12075 PF00595 PDZ domain TREAZ_RS12080 PF00557 Metallopeptidase family M24 TREAZ_RS12085 PF01556 DnaJ C terminal domain TREAZ_RS12085 PF00684 DnaJ central domain TREAZ_RS12085 PF00226 DnaJ domain TREAZ_RS12100 PF01813 ATP synthase subunit D TREAZ_RS12135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS12135 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS12140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS12140 PF16886 ATPsynthase alpha/beta subunit N-term extension TREAZ_RS12140 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS12160 PF01496 V-type ATPase 116kDa subunit family TREAZ_RS12160 PF01496 V-type ATPase 116kDa subunit family TREAZ_RS12175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREAZ_RS12180 PF03840 Preprotein translocase SecG subunit TREAZ_RS12185 PF00571 CBS domain TREAZ_RS12210 PF00480 ROK family TREAZ_RS12220 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREAZ_RS12220 PF00005 ABC transporter TREAZ_RS12225 PF11862 Domain of unknown function (DUF3382) TREAZ_RS12225 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS12230 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS12235 PF13458 Periplasmic binding protein TREAZ_RS12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS12240 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS12240 PF09308 LuxQ, periplasmic TREAZ_RS12240 PF00072 Response regulator receiver domain TREAZ_RS12245 PF00121 Triosephosphate isomerase TREAZ_RS12245 PF00162 Phosphoglycerate kinase TREAZ_RS12250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TREAZ_RS12250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TREAZ_RS12255 PF01554 MatE TREAZ_RS12265 PF00133 tRNA synthetases class I (I, L, M and V) TREAZ_RS12265 PF10458 Valyl tRNA synthetase tRNA binding arm TREAZ_RS12265 PF08264 Anticodon-binding domain of tRNA TREAZ_RS12270 PF02401 LytB protein TREAZ_RS12275 PF02355 Protein export membrane protein TREAZ_RS12280 PF02355 Protein export membrane protein TREAZ_RS12285 PF02699 Preprotein translocase subunit TREAZ_RS12295 PF00301 Rubredoxin TREAZ_RS12315 PF01464 Transglycosylase SLT domain TREAZ_RS12340 PF00005 ABC transporter TREAZ_RS12350 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS12350 PF00072 Response regulator receiver domain TREAZ_RS12350 PF01627 Hpt domain TREAZ_RS12350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS12350 PF00672 HAMP domain TREAZ_RS12350 PF17149 Periplasmic sensor domain found in signal transduction proteins TREAZ_RS12355 PF14698 Argininosuccinate lyase C-terminal TREAZ_RS12355 PF00206 Lyase TREAZ_RS12360 PF00764 Arginosuccinate synthase TREAZ_RS12365 PF01842 ACT domain TREAZ_RS12365 PF03315 Serine dehydratase beta chain TREAZ_RS12370 PF03313 Serine dehydratase alpha chain TREAZ_RS12380 PF00005 ABC transporter TREAZ_RS12395 PF13936 Helix-turn-helix domain TREAZ_RS12395 PF00665 Integrase core domain TREAZ_RS12400 PF00202 Aminotransferase class-III TREAZ_RS12405 PF00696 Amino acid kinase family TREAZ_RS12410 PF01960 ArgJ family TREAZ_RS12415 PF02774 Semialdehyde dehydrogenase, dimerisation domain TREAZ_RS12415 PF01118 Semialdehyde dehydrogenase, NAD binding domain TREAZ_RS12440 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS12440 PF00072 Response regulator receiver domain TREAZ_RS12440 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS12440 PF01627 Hpt domain TREAZ_RS12440 PF00989 PAS fold TREAZ_RS12445 PF00579 tRNA synthetases class I (W and Y) TREAZ_RS12455 PF00391 PEP-utilising enzyme, mobile domain TREAZ_RS12455 PF02896 PEP-utilising enzyme, TIM barrel domain TREAZ_RS12495 PF00919 Uncharacterized protein family UPF0004 TREAZ_RS12495 PF01938 TRAM domain TREAZ_RS12495 PF04055 Radical SAM superfamily TREAZ_RS12505 PF02649 Type I GTP cyclohydrolase folE2 TREAZ_RS12510 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TREAZ_RS12510 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TREAZ_RS12520 PF12627 Probable RNA and SrmB- binding site of polymerase A TREAZ_RS12520 PF13735 tRNA nucleotidyltransferase domain 2 putative TREAZ_RS12520 PF01743 Poly A polymerase head domain TREAZ_RS12525 PF14622 Ribonuclease-III-like TREAZ_RS12525 PF00035 Double-stranded RNA binding motif TREAZ_RS12530 PF00550 Phosphopantetheine attachment site TREAZ_RS12535 PF01783 Ribosomal L32p protein family TREAZ_RS12540 PF01467 Cytidylyltransferase-like TREAZ_RS12570 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS12620 PF08271 TFIIB zinc-binding TREAZ_RS12755 PF07730 Histidine kinase TREAZ_RS12755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS12755 PF13185 GAF domain TREAZ_RS12760 PF00072 Response regulator receiver domain TREAZ_RS12760 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS12765 PF00989 PAS fold TREAZ_RS12765 PF00072 Response regulator receiver domain TREAZ_RS12765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS12765 PF01627 Hpt domain TREAZ_RS12765 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS12765 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS12785 PF13277 YmdB-like protein TREAZ_RS12795 PF00011 Hsp20/alpha crystallin family TREAZ_RS12805 PF00884 Sulfatase TREAZ_RS12810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS12810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS12815 PF12833 Helix-turn-helix domain TREAZ_RS12820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS12820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS12825 PF00884 Sulfatase TREAZ_RS12830 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS12835 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS12845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS12845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS12855 PF01791 DeoC/LacD family aldolase TREAZ_RS12865 PF00860 Permease family TREAZ_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS12875 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS12885 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREAZ_RS12885 PF02256 Iron hydrogenase small subunit TREAZ_RS12885 PF00037 4Fe-4S binding domain TREAZ_RS12885 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREAZ_RS12890 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREAZ_RS12890 PF00037 4Fe-4S binding domain TREAZ_RS12890 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREAZ_RS12935 PF00501 AMP-binding enzyme TREAZ_RS12935 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS12940 PF02615 Malate/L-lactate dehydrogenase TREAZ_RS12945 PF00815 Histidinol dehydrogenase TREAZ_RS12950 PF00155 Aminotransferase class I and II TREAZ_RS12955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TREAZ_RS12955 PF01502 Phosphoribosyl-AMP cyclohydrolase TREAZ_RS12960 PF00977 Histidine biosynthesis protein TREAZ_RS12965 PF00117 Glutamine amidotransferase class-I TREAZ_RS12970 PF00475 Imidazoleglycerol-phosphate dehydratase TREAZ_RS12975 PF08029 HisG, C-terminal domain TREAZ_RS12975 PF01634 ATP phosphoribosyltransferase TREAZ_RS12980 PF12728 Helix-turn-helix domain TREAZ_RS12980 PF12727 PBP superfamily domain TREAZ_RS12990 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS12995 PF00005 ABC transporter TREAZ_RS12995 PF08402 TOBE domain TREAZ_RS13000 PF03459 TOBE domain TREAZ_RS13010 PF08502 LeuA allosteric (dimerisation) domain TREAZ_RS13010 PF00682 HMGL-like TREAZ_RS13020 PF02579 Dinitrogenase iron-molybdenum cofactor TREAZ_RS13020 PF04055 Radical SAM superfamily TREAZ_RS13025 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS13030 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS13035 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS13040 PF00148 Nitrogenase component 1 type Oxidoreductase TREAZ_RS13045 PF00543 Nitrogen regulatory protein P-II TREAZ_RS13050 PF00543 Nitrogen regulatory protein P-II TREAZ_RS13055 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREAZ_RS13060 PF00158 Sigma-54 interaction domain TREAZ_RS13060 PF01590 GAF domain TREAZ_RS13060 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS13080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREAZ_RS13085 PF02559 CarD-like/TRCF domain TREAZ_RS13090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TREAZ_RS13090 PF02542 YgbB family TREAZ_RS13095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREAZ_RS13095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREAZ_RS13100 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS13105 PF00005 ABC transporter TREAZ_RS13105 PF09383 NIL domain TREAZ_RS13110 PF01641 SelR domain TREAZ_RS13110 PF01625 Peptide methionine sulfoxide reductase TREAZ_RS13110 PF08534 Redoxin TREAZ_RS13115 PF03180 NLPA lipoprotein TREAZ_RS13120 PF07687 Peptidase dimerisation domain TREAZ_RS13120 PF01546 Peptidase family M20/M25/M40 TREAZ_RS13125 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS13130 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS13150 PF13180 PDZ domain TREAZ_RS13160 PF01370 NAD dependent epimerase/dehydratase family TREAZ_RS13185 PF13419 Haloacid dehalogenase-like hydrolase TREAZ_RS13195 PF00633 Helix-hairpin-helix motif TREAZ_RS13195 PF10576 Iron-sulfur binding domain of endonuclease III TREAZ_RS13195 PF00730 HhH-GPD superfamily base excision DNA repair protein TREAZ_RS13200 PF02542 YgbB family TREAZ_RS13220 PF00211 Adenylate and Guanylate cyclase catalytic domain TREAZ_RS13220 PF00672 HAMP domain TREAZ_RS13230 PF00521 DNA gyrase/topoisomerase IV, subunit A TREAZ_RS13235 PF01554 MatE TREAZ_RS13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS13240 PF00986 DNA gyrase B subunit, carboxyl terminus TREAZ_RS13240 PF00204 DNA gyrase B TREAZ_RS13240 PF01751 Toprim domain TREAZ_RS13250 PF00679 Elongation factor G C-terminus TREAZ_RS13250 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS13250 PF03764 Elongation factor G, domain IV TREAZ_RS13250 PF14492 Elongation Factor G, domain II TREAZ_RS13255 PF01381 Helix-turn-helix TREAZ_RS13265 PF13657 HipA N-terminal domain TREAZ_RS13265 PF07804 HipA-like C-terminal domain TREAZ_RS13270 PF00285 Citrate synthase, C-terminal domain TREAZ_RS13285 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS13285 PF00501 AMP-binding enzyme TREAZ_RS13295 PF00664 ABC transporter transmembrane region TREAZ_RS13295 PF00005 ABC transporter TREAZ_RS13300 PF00664 ABC transporter transmembrane region TREAZ_RS13300 PF00005 ABC transporter TREAZ_RS13310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TREAZ_RS13315 PF08501 Shikimate dehydrogenase substrate binding domain TREAZ_RS13315 PF01488 Shikimate / quinate 5-dehydrogenase TREAZ_RS13325 PF00501 AMP-binding enzyme TREAZ_RS13325 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS13345 PF03793 PASTA domain TREAZ_RS13350 PF00551 Formyl transferase TREAZ_RS13350 PF02911 Formyl transferase, C-terminal domain TREAZ_RS13355 PF01327 Polypeptide deformylase TREAZ_RS13360 PF00483 Nucleotidyl transferase TREAZ_RS13360 PF01050 Mannose-6-phosphate isomerase TREAZ_RS13365 PF01965 DJ-1/PfpI family TREAZ_RS13375 PF00871 Acetokinase family TREAZ_RS13380 PF00158 Sigma-54 interaction domain TREAZ_RS13380 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS13380 PF00072 Response regulator receiver domain TREAZ_RS13405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS13405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS13440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TREAZ_RS13445 PF03006 Haemolysin-III related TREAZ_RS13450 PF00005 ABC transporter TREAZ_RS13450 PF12848 ABC transporter TREAZ_RS13485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS13485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS13490 PF00873 AcrB/AcrD/AcrF family TREAZ_RS13495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TREAZ_RS13510 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TREAZ_RS13515 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TREAZ_RS13520 PF00005 ABC transporter TREAZ_RS13520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS13525 PF00005 ABC transporter TREAZ_RS13525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREAZ_RS13530 PF12911 N-terminal TM domain of oligopeptide transport permease C TREAZ_RS13530 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS13535 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS13545 PF06964 Alpha-L-arabinofuranosidase C-terminal domain TREAZ_RS13565 PF00107 Zinc-binding dehydrogenase TREAZ_RS13565 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS13570 PF00294 pfkB family carbohydrate kinase TREAZ_RS13575 PF01264 Chorismate synthase TREAZ_RS13595 PF02811 PHP domain TREAZ_RS13595 PF14579 Helix-hairpin-helix motif TREAZ_RS13595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TREAZ_RS13595 PF07733 Bacterial DNA polymerase III alpha NTPase domain TREAZ_RS13605 PF00270 DEAD/DEAH box helicase TREAZ_RS13605 PF17191 RecG wedge domain TREAZ_RS13605 PF00271 Helicase conserved C-terminal domain TREAZ_RS13610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS13610 PF00072 Response regulator receiver domain TREAZ_RS13610 PF01627 Hpt domain TREAZ_RS13610 PF00989 PAS fold TREAZ_RS13610 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS13610 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS13615 PF00072 Response regulator receiver domain TREAZ_RS13620 PF09383 NIL domain TREAZ_RS13620 PF00005 ABC transporter TREAZ_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS13630 PF03180 NLPA lipoprotein TREAZ_RS13640 PF01812 5-formyltetrahydrofolate cyclo-ligase family TREAZ_RS13650 PF00474 Sodium:solute symporter family TREAZ_RS13660 PF00155 Aminotransferase class I and II TREAZ_RS13665 PF09587 Bacterial capsule synthesis protein PGA_cap TREAZ_RS13670 PF05025 RbsD / FucU transport protein family TREAZ_RS13675 PF02952 L-fucose isomerase, C-terminal domain TREAZ_RS13675 PF07881 L-fucose isomerase, first N-terminal domain TREAZ_RS13675 PF07882 L-fucose isomerase, second N-terminal domain TREAZ_RS13680 PF01070 FMN-dependent dehydrogenase TREAZ_RS13695 PF07676 WD40-like Beta Propeller Repeat TREAZ_RS13705 PF02861 Clp amino terminal domain, pathogenicity island component TREAZ_RS13705 PF10431 C-terminal, D2-small domain, of ClpB protein TREAZ_RS13705 PF07724 AAA domain (Cdc48 subfamily) TREAZ_RS13705 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS13705 PF17871 AAA lid domain TREAZ_RS13725 PF02661 Fic/DOC family TREAZ_RS13750 PF00535 Glycosyl transferase family 2 TREAZ_RS13785 PF01370 NAD dependent epimerase/dehydratase family TREAZ_RS13790 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TREAZ_RS13795 PF16363 GDP-mannose 4,6 dehydratase TREAZ_RS13800 PF00483 Nucleotidyl transferase TREAZ_RS13835 PF13635 Domain of unknown function (DUF4143) TREAZ_RS13835 PF13173 AAA domain TREAZ_RS13850 PF16363 GDP-mannose 4,6 dehydratase TREAZ_RS13855 PF04321 RmlD substrate binding domain TREAZ_RS13860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TREAZ_RS13865 PF00483 Nucleotidyl transferase TREAZ_RS13875 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS13875 PF00501 AMP-binding enzyme TREAZ_RS13880 PF00849 RNA pseudouridylate synthase TREAZ_RS13890 PF00107 Zinc-binding dehydrogenase TREAZ_RS13890 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS13895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREAZ_RS13895 PF00205 Thiamine pyrophosphate enzyme, central domain TREAZ_RS13895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREAZ_RS13900 PF00920 Dehydratase family TREAZ_RS13905 PF00180 Isocitrate/isopropylmalate dehydrogenase TREAZ_RS13910 PF00682 HMGL-like TREAZ_RS13910 PF08502 LeuA allosteric (dimerisation) domain TREAZ_RS13915 PF08502 LeuA allosteric (dimerisation) domain TREAZ_RS13915 PF00682 HMGL-like TREAZ_RS13920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TREAZ_RS13920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TREAZ_RS13925 PF10369 Small subunit of acetolactate synthase TREAZ_RS13930 PF01791 DeoC/LacD family aldolase TREAZ_RS13935 PF00793 DAHP synthetase I family TREAZ_RS13935 PF18152 DAHP synthase ferredoxin-like domain TREAZ_RS13940 PF13344 Haloacid dehalogenase-like hydrolase TREAZ_RS13960 PF01300 Telomere recombination TREAZ_RS13960 PF03481 Putative GTP-binding controlling metal-binding TREAZ_RS13965 PF01544 CorA-like Mg2+ transporter protein TREAZ_RS13975 PF13411 MerR HTH family regulatory protein TREAZ_RS13980 PF01969 Protein of unknown function DUF111 TREAZ_RS13995 PF13419 Haloacid dehalogenase-like hydrolase TREAZ_RS14000 PF02581 Thiamine monophosphate synthase TREAZ_RS14015 PF08402 TOBE domain TREAZ_RS14015 PF00005 ABC transporter TREAZ_RS14020 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14025 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14030 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS14035 PF02743 Cache domain TREAZ_RS14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS14035 PF00672 HAMP domain TREAZ_RS14050 PF01063 Amino-transferase class IV TREAZ_RS14070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREAZ_RS14075 PF02384 N-6 DNA Methylase TREAZ_RS14085 PF07691 PA14 domain TREAZ_RS14085 PF01915 Glycosyl hydrolase family 3 C-terminal domain TREAZ_RS14085 PF00933 Glycosyl hydrolase family 3 N terminal domain TREAZ_RS14085 PF14310 Fibronectin type III-like domain TREAZ_RS14090 PF03928 Haem-degrading TREAZ_RS14095 PF04204 Homoserine O-succinyltransferase TREAZ_RS14100 PF01053 Cys/Met metabolism PLP-dependent enzyme TREAZ_RS14120 PF07730 Histidine kinase TREAZ_RS14120 PF17200 Single Cache domain 2 TREAZ_RS14125 PF00072 Response regulator receiver domain TREAZ_RS14125 PF00196 Bacterial regulatory proteins, luxR family TREAZ_RS14130 PF02915 Rubrerythrin TREAZ_RS14135 PF01627 Hpt domain TREAZ_RS14135 PF00989 PAS fold TREAZ_RS14135 PF00072 Response regulator receiver domain TREAZ_RS14135 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS14135 PF18415 Histidine kinase receptor ArcB trans-membrane domain TREAZ_RS14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS14150 PF04055 Radical SAM superfamily TREAZ_RS14150 PF06968 Biotin and Thiamin Synthesis associated domain TREAZ_RS14165 PF00206 Lyase TREAZ_RS14165 PF10415 Fumarase C C-terminus TREAZ_RS14175 PF01926 50S ribosome-binding GTPase TREAZ_RS14175 PF10396 GTP-binding protein TrmE N-terminus TREAZ_RS14175 PF12631 MnmE helical domain TREAZ_RS14180 PF00005 ABC transporter TREAZ_RS14180 PF00664 ABC transporter transmembrane region TREAZ_RS14190 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14215 PF00005 ABC transporter TREAZ_RS14220 PF02653 Branched-chain amino acid transport system / permease component TREAZ_RS14235 PF00120 Glutamine synthetase, catalytic domain TREAZ_RS14235 PF18318 Glutamine synthetase C-terminal domain TREAZ_RS14235 PF12437 Glutamine synthetase type III N terminal TREAZ_RS14240 PF01695 IstB-like ATP binding protein TREAZ_RS14250 PF00543 Nitrogen regulatory protein P-II TREAZ_RS14255 PF00909 Ammonium Transporter Family TREAZ_RS14260 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS14260 PF00158 Sigma-54 interaction domain TREAZ_RS14260 PF01590 GAF domain TREAZ_RS14270 PF01435 Peptidase family M48 TREAZ_RS14280 PF08669 Glycine cleavage T-protein C-terminal barrel domain TREAZ_RS14280 PF01571 Aminomethyltransferase folate-binding domain TREAZ_RS14285 PF01597 Glycine cleavage H-protein TREAZ_RS14290 PF02347 Glycine cleavage system P-protein TREAZ_RS14295 PF02347 Glycine cleavage system P-protein TREAZ_RS14300 PF00899 ThiF family TREAZ_RS14305 PF01171 PP-loop family TREAZ_RS14310 PF01026 TatD related DNase TREAZ_RS14325 PF01048 Phosphorylase superfamily TREAZ_RS14370 PF02424 ApbE family TREAZ_RS14375 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TREAZ_RS14380 PF01040 UbiA prenyltransferase family TREAZ_RS14385 PF02441 Flavoprotein TREAZ_RS14395 PF00005 ABC transporter TREAZ_RS14400 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14425 PF00890 FAD binding domain TREAZ_RS14425 PF04205 FMN-binding domain TREAZ_RS14440 PF03773 Predicted permease TREAZ_RS14475 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS14480 PF00348 Polyprenyl synthetase TREAZ_RS14485 PF06574 FAD synthetase TREAZ_RS14485 PF01687 Riboflavin kinase TREAZ_RS14490 PF00672 HAMP domain TREAZ_RS14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS14490 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS14490 PF00072 Response regulator receiver domain TREAZ_RS14490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS14490 PF01627 Hpt domain TREAZ_RS14510 PF00107 Zinc-binding dehydrogenase TREAZ_RS14510 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS14525 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14530 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS14550 PF00480 ROK family TREAZ_RS14550 PF01325 Iron dependent repressor, N-terminal DNA binding domain TREAZ_RS14560 PF00107 Zinc-binding dehydrogenase TREAZ_RS14560 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS14565 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS14565 PF00107 Zinc-binding dehydrogenase TREAZ_RS14570 PF00834 Ribulose-phosphate 3 epimerase family TREAZ_RS14575 PF12706 Beta-lactamase superfamily domain TREAZ_RS14600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TREAZ_RS14600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TREAZ_RS14600 PF01842 ACT domain TREAZ_RS14605 PF00266 Aminotransferase class-V TREAZ_RS14610 PF06971 Putative DNA-binding protein N-terminus TREAZ_RS14610 PF02629 CoA binding domain TREAZ_RS14625 PF03952 Enolase, N-terminal domain TREAZ_RS14625 PF00113 Enolase, C-terminal TIM barrel domain TREAZ_RS14630 PF02311 AraC-like ligand binding domain TREAZ_RS14630 PF12833 Helix-turn-helix domain TREAZ_RS14650 PF13476 AAA domain TREAZ_RS14655 PF00149 Calcineurin-like phosphoesterase TREAZ_RS14655 PF12320 Type 5 capsule protein repressor C-terminal domain TREAZ_RS14690 PF01464 Transglycosylase SLT domain TREAZ_RS14690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TREAZ_RS14700 PF01580 FtsK/SpoIIIE family TREAZ_RS14700 PF09397 Ftsk gamma domain TREAZ_RS14700 PF17854 FtsK alpha domain TREAZ_RS14705 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS14715 PF00119 ATP synthase A chain TREAZ_RS14720 PF00137 ATP synthase subunit C TREAZ_RS14725 PF00430 ATP synthase B/B' CF(0) TREAZ_RS14730 PF00213 ATP synthase delta (OSCP) subunit TREAZ_RS14735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS14735 PF00306 ATP synthase alpha/beta chain, C terminal domain TREAZ_RS14735 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS14740 PF00231 ATP synthase TREAZ_RS14745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREAZ_RS14745 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREAZ_RS14750 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TREAZ_RS14750 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TREAZ_RS14755 PF00795 Carbon-nitrogen hydrolase TREAZ_RS14755 PF02540 NAD synthase TREAZ_RS14770 PF01926 50S ribosome-binding GTPase TREAZ_RS14770 PF13167 GTP-binding GTPase N-terminal TREAZ_RS14770 PF16360 GTP-binding GTPase Middle Region TREAZ_RS14780 PF10145 Phage-related minor tail protein TREAZ_RS14780 PF01551 Peptidase family M23 TREAZ_RS14780 PF01464 Transglycosylase SLT domain TREAZ_RS14790 PF00348 Polyprenyl synthetase TREAZ_RS14795 PF01728 FtsJ-like methyltransferase TREAZ_RS14815 PF01740 STAS domain TREAZ_RS14815 PF00916 Sulfate permease family TREAZ_RS14820 PF08546 Ketopantoate reductase PanE/ApbA C terminal TREAZ_RS14820 PF02558 Ketopantoate reductase PanE/ApbA TREAZ_RS14830 PF03239 Iron permease FTR1 family TREAZ_RS14835 PF10634 Fe2+ transport protein TREAZ_RS14855 PF00005 ABC transporter TREAZ_RS14925 PF01867 CRISPR associated protein Cas1 TREAZ_RS14930 PF09827 CRISPR associated protein Cas2 TREAZ_RS15010 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TREAZ_RS15010 PF02769 AIR synthase related protein, C-terminal domain TREAZ_RS15010 PF00586 AIR synthase related protein, N-terminal domain TREAZ_RS15035 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS15035 PF14492 Elongation Factor G, domain II TREAZ_RS15035 PF03764 Elongation factor G, domain IV TREAZ_RS15035 PF00679 Elongation factor G C-terminus TREAZ_RS15035 PF03144 Elongation factor Tu domain 2 TREAZ_RS15045 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS15050 PF00072 Response regulator receiver domain TREAZ_RS15050 PF00158 Sigma-54 interaction domain TREAZ_RS15050 PF02954 Bacterial regulatory protein, Fis family TREAZ_RS15060 PF04452 RNA methyltransferase TREAZ_RS15075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TREAZ_RS15090 PF00171 Aldehyde dehydrogenase family TREAZ_RS15095 PF00696 Amino acid kinase family TREAZ_RS15100 PF14748 Pyrroline-5-carboxylate reductase dimerisation TREAZ_RS15100 PF03807 NADP oxidoreductase coenzyme F420-dependent TREAZ_RS15110 PF02631 RecX family TREAZ_RS15115 PF00380 Ribosomal protein S9/S16 TREAZ_RS15120 PF00572 Ribosomal protein L13 TREAZ_RS15135 PF00144 Beta-lactamase TREAZ_RS15145 PF00392 Bacterial regulatory proteins, gntR family TREAZ_RS15150 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15195 PF13580 SIS domain TREAZ_RS15200 PF00480 ROK family TREAZ_RS15225 PF00005 ABC transporter TREAZ_RS15230 PF17862 AAA+ lid domain TREAZ_RS15230 PF00004 ATPase family associated with various cellular activities (AAA) TREAZ_RS15230 PF01434 Peptidase family M41 TREAZ_RS15265 PF18693 TRAM domain TREAZ_RS15265 PF04055 Radical SAM superfamily TREAZ_RS15265 PF00919 Uncharacterized protein family UPF0004 TREAZ_RS15270 PF07969 Amidohydrolase family TREAZ_RS15275 PF00580 UvrD/REP helicase N-terminal domain TREAZ_RS15275 PF13361 UvrD-like helicase C-terminal domain TREAZ_RS15290 PF02561 Flagellar protein FliS TREAZ_RS15300 PF08544 GHMP kinases C terminal TREAZ_RS15300 PF10509 Galactokinase galactose-binding signature TREAZ_RS15300 PF00288 GHMP kinases N terminal domain TREAZ_RS15305 PF13173 AAA domain TREAZ_RS15305 PF13635 Domain of unknown function (DUF4143) TREAZ_RS15310 PF13185 GAF domain TREAZ_RS15325 PF00476 DNA polymerase family A TREAZ_RS15325 PF01367 5'-3' exonuclease, C-terminal SAM fold TREAZ_RS15325 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TREAZ_RS15325 PF01612 3'-5' exonuclease TREAZ_RS15330 PF03949 Malic enzyme, NAD binding domain TREAZ_RS15330 PF00390 Malic enzyme, N-terminal domain TREAZ_RS15335 PF02810 SEC-C motif TREAZ_RS15340 PF00291 Pyridoxal-phosphate dependent enzyme TREAZ_RS15340 PF14821 Threonine synthase N terminus TREAZ_RS15345 PF01790 Prolipoprotein diacylglyceryl transferase TREAZ_RS15355 PF10609 NUBPL iron-transfer P-loop NTPase TREAZ_RS15365 PF02018 Carbohydrate binding domain TREAZ_RS15365 PF06452 Carbohydrate family 9 binding domain-like TREAZ_RS15365 PF00331 Glycosyl hydrolase family 10 TREAZ_RS15405 PF03572 Peptidase family S41 TREAZ_RS15405 PF13180 PDZ domain TREAZ_RS15410 PF04452 RNA methyltransferase TREAZ_RS15420 PF00588 SpoU rRNA Methylase family TREAZ_RS15440 PF04012 PspA/IM30 family TREAZ_RS15470 PF13635 Domain of unknown function (DUF4143) TREAZ_RS15470 PF13173 AAA domain TREAZ_RS15485 PF12127 SigmaW regulon antibacterial TREAZ_RS15490 PF01957 NfeD-like C-terminal, partner-binding TREAZ_RS15490 PF01972 Serine dehydrogenase proteinase TREAZ_RS15495 PF00270 DEAD/DEAH box helicase TREAZ_RS15495 PF00271 Helicase conserved C-terminal domain TREAZ_RS15500 PF00005 ABC transporter TREAZ_RS15500 PF12848 ABC transporter TREAZ_RS15520 PF00872 Transposase, Mutator family TREAZ_RS15535 PF03462 PCRF domain TREAZ_RS15535 PF00472 RF-1 domain TREAZ_RS15540 PF13847 Methyltransferase domain TREAZ_RS15540 PF17827 PrmC N-terminal domain TREAZ_RS15550 PF09587 Bacterial capsule synthesis protein PGA_cap TREAZ_RS15565 PF01196 Ribosomal protein L17 TREAZ_RS15570 PF01000 RNA polymerase Rpb3/RpoA insert domain TREAZ_RS15570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TREAZ_RS15570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TREAZ_RS15575 PF00163 Ribosomal protein S4/S9 N-terminal domain TREAZ_RS15575 PF01479 S4 domain TREAZ_RS15580 PF00411 Ribosomal protein S11 TREAZ_RS15585 PF00416 Ribosomal protein S13/S18 TREAZ_RS15590 PF00444 Ribosomal protein L36 TREAZ_RS15595 PF00344 SecY translocase TREAZ_RS15600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TREAZ_RS15605 PF00327 Ribosomal protein L30p/L7e TREAZ_RS15610 PF03719 Ribosomal protein S5, C-terminal domain TREAZ_RS15610 PF00333 Ribosomal protein S5, N-terminal domain TREAZ_RS15615 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TREAZ_RS15620 PF00347 Ribosomal protein L6 TREAZ_RS15625 PF00410 Ribosomal protein S8 TREAZ_RS15630 PF00253 Ribosomal protein S14p/S29e TREAZ_RS15635 PF00673 ribosomal L5P family C-terminus TREAZ_RS15635 PF00281 Ribosomal protein L5 TREAZ_RS15640 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TREAZ_RS15640 PF00467 KOW motif TREAZ_RS15645 PF00238 Ribosomal protein L14p/L23e TREAZ_RS15650 PF00366 Ribosomal protein S17 TREAZ_RS15655 PF00831 Ribosomal L29 protein TREAZ_RS15660 PF00252 Ribosomal protein L16p/L10e TREAZ_RS15665 PF07650 KH domain TREAZ_RS15665 PF00189 Ribosomal protein S3, C-terminal domain TREAZ_RS15670 PF00237 Ribosomal protein L22p/L17e TREAZ_RS15675 PF00203 Ribosomal protein S19 TREAZ_RS15680 PF03947 Ribosomal Proteins L2, C-terminal domain TREAZ_RS15680 PF00181 Ribosomal Proteins L2, RNA binding domain TREAZ_RS15685 PF00276 Ribosomal protein L23 TREAZ_RS15690 PF00573 Ribosomal protein L4/L1 family TREAZ_RS15695 PF00297 Ribosomal protein L3 TREAZ_RS15700 PF00338 Ribosomal protein S10p/S20e TREAZ_RS15705 PF03144 Elongation factor Tu domain 2 TREAZ_RS15705 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS15705 PF03143 Elongation factor Tu C-terminal domain TREAZ_RS15715 PF00177 Ribosomal protein S7p/S5e TREAZ_RS15720 PF00164 Ribosomal protein S12/S23 TREAZ_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15745 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS15745 PF00072 Response regulator receiver domain TREAZ_RS15760 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS15760 PF00107 Zinc-binding dehydrogenase TREAZ_RS15765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS15765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS15790 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TREAZ_RS15790 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TREAZ_RS15795 PF02779 Transketolase, pyrimidine binding domain TREAZ_RS15795 PF02780 Transketolase, C-terminal domain TREAZ_RS15800 PF00456 Transketolase, thiamine diphosphate binding domain TREAZ_RS15805 PF00171 Aldehyde dehydrogenase family TREAZ_RS15810 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15815 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS15820 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS15830 PF13187 4Fe-4S dicluster domain TREAZ_RS15830 PF04060 Putative Fe-S cluster TREAZ_RS15830 PF00037 4Fe-4S binding domain TREAZ_RS15835 PF02508 Rnf-Nqr subunit, membrane protein TREAZ_RS15840 PF02508 Rnf-Nqr subunit, membrane protein TREAZ_RS15845 PF04205 FMN-binding domain TREAZ_RS15850 PF03116 NQR2, RnfD, RnfE family TREAZ_RS15855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREAZ_RS15855 PF13237 4Fe-4S dicluster domain TREAZ_RS15855 PF10531 SLBB domain TREAZ_RS15855 PF13375 RnfC Barrel sandwich hybrid domain TREAZ_RS15860 PF12705 PD-(D/E)XK nuclease superfamily TREAZ_RS15865 PF13361 UvrD-like helicase C-terminal domain TREAZ_RS15865 PF00580 UvrD/REP helicase N-terminal domain TREAZ_RS15865 PF12705 PD-(D/E)XK nuclease superfamily TREAZ_RS15870 PF01554 MatE TREAZ_RS15875 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TREAZ_RS15875 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TREAZ_RS15880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TREAZ_RS15880 PF03484 tRNA synthetase B5 domain TREAZ_RS15910 PF12146 Serine aminopeptidase, S33 TREAZ_RS15915 PF07748 Glycosyl hydrolases family 38 C-terminal domain TREAZ_RS15915 PF01074 Glycosyl hydrolases family 38 N-terminal domain TREAZ_RS15915 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain TREAZ_RS15915 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 TREAZ_RS15915 PF09261 Alpha mannosidase middle domain TREAZ_RS15940 PF00226 DnaJ domain TREAZ_RS15940 PF00684 DnaJ central domain TREAZ_RS15940 PF01556 DnaJ C terminal domain TREAZ_RS15950 PF01556 DnaJ C terminal domain TREAZ_RS15950 PF00684 DnaJ central domain TREAZ_RS15950 PF00226 DnaJ domain TREAZ_RS15955 PF00872 Transposase, Mutator family TREAZ_RS15975 PF09371 Tex-like protein N-terminal domain TREAZ_RS15975 PF00575 S1 RNA binding domain TREAZ_RS15975 PF17674 HHH domain TREAZ_RS15975 PF16921 Tex protein YqgF-like domain TREAZ_RS15980 PF02661 Fic/DOC family TREAZ_RS15980 PF13784 Fic/DOC family N-terminal TREAZ_RS15985 PF09297 NADH pyrophosphatase zinc ribbon domain TREAZ_RS15985 PF00293 NUDIX domain TREAZ_RS16000 PF00149 Calcineurin-like phosphoesterase TREAZ_RS16005 PF01661 Macro domain TREAZ_RS16010 PF01047 MarR family TREAZ_RS16015 PF01554 MatE TREAZ_RS16020 PF02743 Cache domain TREAZ_RS16020 PF00672 HAMP domain TREAZ_RS16020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS16025 PF00005 ABC transporter TREAZ_RS16025 PF00664 ABC transporter transmembrane region TREAZ_RS16030 PF00664 ABC transporter transmembrane region TREAZ_RS16030 PF00005 ABC transporter TREAZ_RS16035 PF02527 rRNA small subunit methyltransferase G TREAZ_RS16040 PF02743 Cache domain TREAZ_RS16040 PF00672 HAMP domain TREAZ_RS16040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16040 PF06580 Histidine kinase TREAZ_RS16045 PF16874 Glycosyl hydrolase family 36 C-terminal domain TREAZ_RS16045 PF16875 Glycosyl hydrolase family 36 N-terminal domain TREAZ_RS16055 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16115 PF04055 Radical SAM superfamily TREAZ_RS16120 PF01228 Glycine radical TREAZ_RS16120 PF02901 Pyruvate formate lyase-like TREAZ_RS16125 PF16257 tagaturonate epimerase TREAZ_RS16135 PF00731 AIR carboxylase TREAZ_RS16140 PF01259 SAICAR synthetase TREAZ_RS16145 PF00156 Phosphoribosyl transferase domain TREAZ_RS16150 PF00072 Response regulator receiver domain TREAZ_RS16150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS16150 PF01627 Hpt domain TREAZ_RS16150 PF00672 HAMP domain TREAZ_RS16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16150 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS16155 PF01695 IstB-like ATP binding protein TREAZ_RS16160 PF00356 Bacterial regulatory proteins, lacI family TREAZ_RS16175 PF01547 Bacterial extracellular solute-binding protein TREAZ_RS16180 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16195 PF02769 AIR synthase related protein, C-terminal domain TREAZ_RS16195 PF00586 AIR synthase related protein, N-terminal domain TREAZ_RS16200 PF00551 Formyl transferase TREAZ_RS16205 PF02142 MGS-like domain TREAZ_RS16205 PF01808 AICARFT/IMPCHase bienzyme TREAZ_RS16210 PF02844 Phosphoribosylglycinamide synthetase, N domain TREAZ_RS16210 PF02843 Phosphoribosylglycinamide synthetase, C domain TREAZ_RS16210 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TREAZ_RS16215 PF00571 CBS domain TREAZ_RS16215 PF01595 Cyclin M transmembrane N-terminal domain TREAZ_RS16215 PF03471 Transporter associated domain TREAZ_RS16230 PF13932 GidA associated domain TREAZ_RS16230 PF01134 Glucose inhibited division protein A TREAZ_RS16235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREAZ_RS16235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREAZ_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16260 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS16270 PF02743 Cache domain TREAZ_RS16270 PF00672 HAMP domain TREAZ_RS16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16270 PF06580 Histidine kinase TREAZ_RS16275 PF12833 Helix-turn-helix domain TREAZ_RS16275 PF00072 Response regulator receiver domain TREAZ_RS16280 PF13635 Domain of unknown function (DUF4143) TREAZ_RS16280 PF13173 AAA domain TREAZ_RS16290 PF13367 PrsW family intramembrane metalloprotease TREAZ_RS16300 PF01343 Peptidase family S49 TREAZ_RS16325 PF02965 Vitamin B12 dependent methionine synthase, activation domain TREAZ_RS16325 PF00809 Pterin binding enzyme TREAZ_RS16325 PF02607 B12 binding domain TREAZ_RS16325 PF02310 B12 binding domain TREAZ_RS16325 PF02574 Homocysteine S-methyltransferase TREAZ_RS16330 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREAZ_RS16335 PF00404 Dockerin type I domain TREAZ_RS16335 PF03425 Carbohydrate binding domain (family 11) TREAZ_RS16335 PF00150 Cellulase (glycosyl hydrolase family 5) TREAZ_RS16335 PF02156 Glycosyl hydrolase family 26 TREAZ_RS16340 PF04480 Protein of unknown function (DUF559) TREAZ_RS16340 PF03852 DNA mismatch endonuclease Vsr TREAZ_RS16370 PF00501 AMP-binding enzyme TREAZ_RS16370 PF13193 AMP-binding enzyme C-terminal domain TREAZ_RS16380 PF02899 Phage integrase, N-terminal SAM-like domain TREAZ_RS16380 PF00589 Phage integrase family TREAZ_RS16385 PF12728 Helix-turn-helix domain TREAZ_RS16455 PF00216 Bacterial DNA-binding protein TREAZ_RS16525 PF02664 S-Ribosylhomocysteinase (LuxS) TREAZ_RS16530 PF01048 Phosphorylase superfamily TREAZ_RS16535 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS16545 PF02021 Uncharacterised protein family UPF0102 TREAZ_RS16550 PF11871 Domain of unknown function (DUF3391) TREAZ_RS16550 PF01966 HD domain TREAZ_RS16565 PF01245 Ribosomal protein L19 TREAZ_RS16570 PF01746 tRNA (Guanine-1)-methyltransferase TREAZ_RS16575 PF01782 RimM N-terminal domain TREAZ_RS16585 PF00886 Ribosomal protein S16 TREAZ_RS16605 PF02446 4-alpha-glucanotransferase TREAZ_RS16610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TREAZ_RS16610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TREAZ_RS16615 PF12729 Four helix bundle sensory module for signal transduction TREAZ_RS16615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS16615 PF00672 HAMP domain TREAZ_RS16625 PF00872 Transposase, Mutator family TREAZ_RS16635 PF13277 YmdB-like protein TREAZ_RS16640 PF12072 Domain of unknown function (DUF3552) TREAZ_RS16640 PF01966 HD domain TREAZ_RS16640 PF00013 KH domain TREAZ_RS16655 PF00072 Response regulator receiver domain TREAZ_RS16670 PF02895 Signal transducing histidine kinase, homodimeric domain TREAZ_RS16670 PF01584 CheW-like domain TREAZ_RS16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16670 PF01627 Hpt domain TREAZ_RS16670 PF07194 P2 response regulator binding domain TREAZ_RS16695 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16695 PF01627 Hpt domain TREAZ_RS16695 PF00072 Response regulator receiver domain TREAZ_RS16695 PF00672 HAMP domain TREAZ_RS16695 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS16700 PF00072 Response regulator receiver domain TREAZ_RS16705 PF02384 N-6 DNA Methylase TREAZ_RS16715 PF01420 Type I restriction modification DNA specificity domain TREAZ_RS16750 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TREAZ_RS16750 PF11867 Domain of unknown function (DUF3387) TREAZ_RS16750 PF18766 SWI2/SNF2 ATPase TREAZ_RS16760 PF00672 HAMP domain TREAZ_RS16760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS16760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS16760 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS16760 PF01627 Hpt domain TREAZ_RS16760 PF00072 Response regulator receiver domain TREAZ_RS16765 PF02386 Cation transport protein TREAZ_RS16770 PF02254 TrkA-N domain TREAZ_RS16770 PF02080 TrkA-C domain TREAZ_RS16805 PF13181 Tetratricopeptide repeat TREAZ_RS16805 PF01435 Peptidase family M48 TREAZ_RS16820 PF00872 Transposase, Mutator family TREAZ_RS16825 PF00872 Transposase, Mutator family TREAZ_RS16830 PF00872 Transposase, Mutator family TREAZ_RS16835 PF00872 Transposase, Mutator family TREAZ_RS16840 PF02384 N-6 DNA Methylase TREAZ_RS16865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TREAZ_RS16865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TREAZ_RS16870 PF10282 Lactonase, 7-bladed beta-propeller TREAZ_RS16875 PF00107 Zinc-binding dehydrogenase TREAZ_RS16875 PF08240 Alcohol dehydrogenase GroES-like domain TREAZ_RS16880 PF02163 Peptidase family M50 TREAZ_RS16885 PF02086 D12 class N6 adenine-specific DNA methyltransferase TREAZ_RS16895 PF07687 Peptidase dimerisation domain TREAZ_RS16895 PF01546 Peptidase family M20/M25/M40 TREAZ_RS16905 PF02690 Na+/Pi-cotransporter TREAZ_RS16910 PF00579 tRNA synthetases class I (W and Y) TREAZ_RS16915 PF12683 Protein of unknown function (DUF3798) TREAZ_RS16920 PF00005 ABC transporter TREAZ_RS16945 PF02614 Glucuronate isomerase TREAZ_RS16950 PF00933 Glycosyl hydrolase family 3 N terminal domain TREAZ_RS16950 PF01915 Glycosyl hydrolase family 3 C-terminal domain TREAZ_RS16950 PF14310 Fibronectin type III-like domain TREAZ_RS16955 PF01758 Sodium Bile acid symporter family TREAZ_RS16965 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREAZ_RS16970 PF01915 Glycosyl hydrolase family 3 C-terminal domain TREAZ_RS16970 PF00933 Glycosyl hydrolase family 3 N terminal domain TREAZ_RS16980 PF12706 Beta-lactamase superfamily domain TREAZ_RS16985 PF00392 Bacterial regulatory proteins, gntR family TREAZ_RS16985 PF07702 UTRA domain TREAZ_RS16990 PF13419 Haloacid dehalogenase-like hydrolase TREAZ_RS16995 PF07690 Major Facilitator Superfamily TREAZ_RS17050 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17050 PF00072 Response regulator receiver domain TREAZ_RS17050 PF01627 Hpt domain TREAZ_RS17050 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17050 PF00672 HAMP domain TREAZ_RS17080 PF04073 Aminoacyl-tRNA editing domain TREAZ_RS17090 PF04298 Putative neutral zinc metallopeptidase TREAZ_RS17095 PF03989 DNA gyrase C-terminal domain, beta-propeller TREAZ_RS17095 PF00521 DNA gyrase/topoisomerase IV, subunit A TREAZ_RS17100 PF13416 Bacterial extracellular solute-binding protein TREAZ_RS17105 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS17110 PF00528 Binding-protein-dependent transport system inner membrane component TREAZ_RS17125 PF03781 Sulfatase-modifying factor enzyme 1 TREAZ_RS17135 PF13635 Domain of unknown function (DUF4143) TREAZ_RS17135 PF13173 AAA domain TREAZ_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17145 PF00986 DNA gyrase B subunit, carboxyl terminus TREAZ_RS17145 PF00204 DNA gyrase B TREAZ_RS17145 PF01751 Toprim domain TREAZ_RS17170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17170 PF00672 HAMP domain TREAZ_RS17170 PF01627 Hpt domain TREAZ_RS17170 PF00072 Response regulator receiver domain TREAZ_RS17170 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17175 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17175 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17175 PF00672 HAMP domain TREAZ_RS17175 PF00072 Response regulator receiver domain TREAZ_RS17175 PF01627 Hpt domain TREAZ_RS17185 PF00999 Sodium/hydrogen exchanger family TREAZ_RS17200 PF00128 Alpha amylase, catalytic domain TREAZ_RS17205 PF00128 Alpha amylase, catalytic domain TREAZ_RS17215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17215 PF00072 Response regulator receiver domain TREAZ_RS17215 PF01627 Hpt domain TREAZ_RS17215 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17215 PF00672 HAMP domain TREAZ_RS17240 PF02810 SEC-C motif TREAZ_RS17240 PF07517 SecA DEAD-like domain TREAZ_RS17240 PF01043 SecA preprotein cross-linking domain TREAZ_RS17240 PF07516 SecA Wing and Scaffold domain TREAZ_RS17245 PF01261 Xylose isomerase-like TIM barrel TREAZ_RS17265 PF00877 NlpC/P60 family TREAZ_RS17280 PF00654 Voltage gated chloride channel TREAZ_RS17285 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17285 PF01627 Hpt domain TREAZ_RS17285 PF00072 Response regulator receiver domain TREAZ_RS17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17300 PF04998 RNA polymerase Rpb1, domain 5 TREAZ_RS17300 PF05000 RNA polymerase Rpb1, domain 4 TREAZ_RS17300 PF04983 RNA polymerase Rpb1, domain 3 TREAZ_RS17300 PF00623 RNA polymerase Rpb1, domain 2 TREAZ_RS17300 PF04997 RNA polymerase Rpb1, domain 1 TREAZ_RS17305 PF04983 RNA polymerase Rpb1, domain 3 TREAZ_RS17305 PF00623 RNA polymerase Rpb1, domain 2 TREAZ_RS17305 PF04997 RNA polymerase Rpb1, domain 1 TREAZ_RS17305 PF04998 RNA polymerase Rpb1, domain 5 TREAZ_RS17305 PF05000 RNA polymerase Rpb1, domain 4 TREAZ_RS17310 PF03330 Lytic transglycolase TREAZ_RS17310 PF05036 Sporulation related domain TREAZ_RS17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17315 PF01627 Hpt domain TREAZ_RS17315 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17315 PF00672 HAMP domain TREAZ_RS17315 PF00072 Response regulator receiver domain TREAZ_RS17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17345 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17345 PF00072 Response regulator receiver domain TREAZ_RS17345 PF09308 LuxQ, periplasmic TREAZ_RS17375 PF03781 Sulfatase-modifying factor enzyme 1 TREAZ_RS17380 PF03330 Lytic transglycolase TREAZ_RS17380 PF05036 Sporulation related domain TREAZ_RS17395 PF00005 ABC transporter TREAZ_RS17395 PF00664 ABC transporter transmembrane region TREAZ_RS17405 PF04286 Protein of unknown function (DUF445) TREAZ_RS17420 PF00440 Bacterial regulatory proteins, tetR family TREAZ_RS17420 PF17932 Tetracyclin repressor-like, C-terminal domain TREAZ_RS17435 PF02203 Tar ligand binding domain homologue TREAZ_RS17435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREAZ_RS17435 PF00672 HAMP domain TREAZ_RS17445 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17445 PF00072 Response regulator receiver domain TREAZ_RS17445 PF01627 Hpt domain TREAZ_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17450 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17450 PF09308 LuxQ, periplasmic TREAZ_RS17450 PF00072 Response regulator receiver domain TREAZ_RS17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17455 PF11734 TilS substrate C-terminal domain TREAZ_RS17455 PF01171 PP-loop family TREAZ_RS17485 PF00009 Elongation factor Tu GTP binding domain TREAZ_RS17485 PF03144 Elongation factor Tu domain 2 TREAZ_RS17485 PF03143 Elongation factor Tu C-terminal domain TREAZ_RS17495 PF00294 pfkB family carbohydrate kinase TREAZ_RS17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREAZ_RS17500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TREAZ_RS17500 PF00072 Response regulator receiver domain TREAZ_RS17500 PF01627 Hpt domain TREAZ_RS17500 PF00672 HAMP domain TREAZ_RS17500 PF00512 His Kinase A (phospho-acceptor) domain TREAZ_RS17505 PF00990 Diguanylate cyclase, GGDEF domain TREAZ_RS17505 PF17151 Periplasmic sensor domain TREAZ_RS17525 PF00890 FAD binding domain TREAZ_RS17525 PF04205 FMN-binding domain TREAZ_RS17530 PF00005 ABC transporter TREAZ_RS17530 PF00664 ABC transporter transmembrane region TREAZ_RS17535 PF00664 ABC transporter transmembrane region TREAZ_RS17535 PF00005 ABC transporter TREAZ_RS17545 PF00395 S-layer homology domain TREAZ_RS17545 PF00331 Glycosyl hydrolase family 10 TREAZ_RS17545 PF02018 Carbohydrate binding domain TREAZ_RS17545 PF06452 Carbohydrate family 9 binding domain-like TREAZ_RS17550 PF00331 Glycosyl hydrolase family 10 TREAZ_RS17550 PF02018 Carbohydrate binding domain TREAZ_RS17550 PF06452 Carbohydrate family 9 binding domain-like TREAZ_RS17550 PF00395 S-layer homology domain TREAZ_RS17560 PF02368 Bacterial Ig-like domain (group 2) TREAZ_RS17580 PF00072 Response regulator receiver domain TREAZ_RS17580 PF12833 Helix-turn-helix domain