locus_tag old_locus_tag gene Name start end strand product note type ID NCBI TDE0001 TDE0001 dnaA dnaA 166 1575 - chromosomal replication initiation protein binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0001 TDE0002 TDE0002 gyrB gyrB 1684 3600 + DNA gyrase subunit B identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0002 TDE0003 TDE0003 TDE0003 3623 4342 + hypothetical protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0003 TDE0004 TDE0004 TDE0004 4383 5057 + hypothetical protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0004 TDE0005 TDE0005 ltaE ltaE 5075 6130 - L-threonine aldolase identified by similarity to SP:O50584 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0005 TDE0006 TDE0006 TDE0006 6200 9784 - SNF2 domain-containing protein identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04434%3B match to protein family HMM TIGR01612 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0006 TDE0007 TDE0007 TDE0007 10014 10868 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0007 TDE0008 TDE0008 TDE0008 11031 13706 + copper-translocating P-type ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR00003%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0008 TDE0009 TDE0009 TDE0009 13814 14635 - hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0009 TDE0010 TDE0010 TDE0010 14720 15286 + MutT/nudix identified by match to protein family HMM PF00293 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0010 TDE0011 TDE0011 TDE0011 15548 16195 + peroxiredoxin alkyl hydroperoxidase%3B catalyze the reduction of hydrogen peroxide to water and the reduction of alkyl hydroperoxides to the corresponding alcohols gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0011 TDE0012 TDE0012 TDE0012 16308 17762 + carbon starvation protein CstA identified by similarity to SP:P15078 gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0012 TDE0013 TDE0013 folD folD 17848 18729 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase identified by similarity to SP:P54382%3B match to protein family HMM PF00763%3B match to protein family HMM PF02882 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0013 TDE0014 TDE0014 TDE0014 18930 19547 + hypothetical protein identified by similarity to SP:O83715 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0014 TDE0015 TDE0015 TDE0015 19567 20604 + lipoprotein gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0015 TDE0016 TDE0016 TDE0016 20597 21922 + recombination factor protein RarA identified by match to protein family HMM PF00004 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0016 TDE0017 TDE0017 TDE0017 21998 23026 - hypothetical protein identified by similarity to OMNI:NTL01FN1575%3B match to protein family HMM PF05343 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0017 TDE0018 TDE0018 TDE0018 23163 23663 - LysM domain-containing protein identified by match to protein family HMM PF01476 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0018 TDE0019 TDE0019 fhs fhs 23755 25419 - formate--tetrahydrofolate ligase catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0019 TDE0020 TDE0020 glyS glyS 25586 26941 + glycyl-tRNA synthetase Catalyzes a two-step reaction%2C first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0020 TDE0021 TDE0021 TDE0021 26954 27955 + CDP-alcohol phosphatidyltransferase identified by match to protein family HMM PF01066 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0021 TDE0022 TDE0022 TDE0022 28012 28581 + hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0022 TDE0023 TDE0023 TDE0023 28613 29509 - acetyltransferase identified by match to protein family HMM PF00583 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0023 TDE0024 TDE0024 TDE0024 29509 31182 - glycosyl hydrolase identified by match to protein family HMM PF00933 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0024 TDE0025 TDE0025 TDE0025 31191 31649 - hypothetical protein identified by similarity to SP:O83563 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0025 TDE0026 TDE0026 TDE0026 31916 33106 - TraB identified by match to protein family HMM PF01963%3B match to protein family HMM TIGR00261 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0026 TDE0027 TDE0027 TDE0027 33093 34076 - DHH super%2C subfamily 1 identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0027 TDE0028 TDE0028 TDE0028 34146 36020 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0028 TDE0029 TDE0029 TDE0029 36034 37812 - ABC transporter ATP-binding protein identified by similarity to SP:P33116%3B match to protein family HMM PF00005 gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0029 TDE0030 TDE0030 TDE0030 38018 38797 - prolipoprotein diacylglyceryl transferase identified by match to protein family HMM PF01790 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0030 TDE0031 TDE0031 TDE0031 38925 39185 - hypothetical protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0031 TDE0032 TDE0032 TDE0032 39321 40067 - histidine kinase-related ATPase identified by match to protein family HMM PF02518 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0032 TDE0033 TDE0033 TDE0033 40067 40786 - DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0033 TDE0034 TDE0034 TDE0034 40803 41540 - hypothetical protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0034 TDE0035 TDE0035 TDE0035 41670 42110 - acetyltransferase identified by match to protein family HMM PF00583 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0035 TDE0036 TDE0036 TDE0036 42225 42617 - hypothetical protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0036 TDE0037 TDE0037 TDE0037 42641 42889 - AbrB family transcriptional regulator identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0037 TDE0038 TDE0038 fabF fabF 43126 44361 - 3-oxoacyl-ACP synthase identified by similarity to SP:P39435%3B match to protein family HMM PF00109%3B match to protein family HMM PF02801 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0038 TDE0039 TDE0039 TDE0039 44579 45763 - ISTde1%2C transposase identified by similarity to SP:Q54513 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0039 TDE0040 TDE0040 TDE0040 45866 47518 - AMP-binding protein identified by match to protein family HMM PF00501 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0040 TDE0041 TDE0041 birA birA 47637 48695 + birA bifunctional protein identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM TIGR00121 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0041 TDE0042 TDE0042 pta pta 48816 49823 + phosphate acetyltransferase identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0042 TDE0043 TDE0043 TDE0043 49828 51711 + TPR identified by similarity to SP:O83133%3B match to protein family HMM PF00515 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0043 TDE0044 TDE0044 TDE0044 51750 53222 - ABC transporter ATP-binding protein identified by similarity to SP:P39115%3B match to protein family HMM PF00005 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0044 TDE0045 TDE0045 TDE0045 53359 55203 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0045 TDE0046 TDE0046 TDE0046 55298 55939 - formiminotransferase-cyclodeaminase identified by match to protein family HMM PF04961 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0046 TDE0047 TDE0047 hutI hutI 56010 57251 - imidazolonepropionase catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0047 TDE0048 TDE0048 TDE0048 57277 57912 - hypothetical protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0048 TDE0049 TDE0049 TDE0049 58289 59179 - hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0049 TDE0050 TDE0050 TDE0050 59373 60161 - RNA methyltransferase identified by match to protein family HMM PF00588 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0050 TDE0051 TDE0051 TDE0051 60163 61314 - iron-containing alcohol dehydrogenase identified by match to protein family HMM PF00465 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0051 TDE0052 TDE0052 fliQ fliQ 61445 61714 + flagellar biosynthetic protein FliQ identified by similarity to SP:P74931%3B match to protein family HMM PF01313%3B match to protein family HMM TIGR01402 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0052 TDE0053 TDE0053 fliR fliR 61733 62527 + flagellar biosynthetic protein FliR identified by similarity to SP:P74932%3B match to protein family HMM PF01311%3B match to protein family HMM TIGR01400 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0053 TDE0054 TDE0054 flhB flhB 62524 63696 + flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0054 TDE0055 TDE0055 flhA flhA 63705 65801 + flagellar biosynthesis protein FlhA membrane protein involved in the flagellar export apparatus gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0055 TDE0056 TDE0056 TDE0056 65846 66052 + DNA-directed RNA polymerase subunit omega identified by match to protein family HMM PF01192 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0056 TDE0057 TDE0057 miaA-1 miaA-1 66075 67061 + tRNA delta(2)-isopentenylpyrophosphate transferase identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0057 TDE0058 TDE0058 TDE0058 67126 67458 + hypothetical protein identified by similarity to OMNI:NTL01FN0901 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0058 TDE0059 TDE0059 TDE0059 67434 67541 + hypothetical protein gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0059 TDE0060 TDE0060 TDE0060 67617 67928 - hypothetical protein gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0060 TDE0061 TDE0061 TDE0061 67988 69034 - fic identified by match to protein family HMM PF02661 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0061 TDE0062 TDE0062 TDE0062 69230 69721 + PTS system transporter subunit IIA identified by match to protein family HMM PF00359 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0062 TDE0063 TDE0063 TDE0063 69854 71389 + hypothetical protein identified by similarity to OMNI:BB0351 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0063 TDE0064 TDE0064 pfk pfk 71425 72741 - diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the formation of fructose 1%2C6-bisphosphate from fructose 6-phosphate and diphosphate gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0064 TDE0065 TDE0065 TDE0065 72912 73436 - hypothetical protein identified by similarity to OMNI:TP0087%3B match to protein family HMM PF02643 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0065 TDE0066 TDE0066 TDE0066 73426 74016 - hypothetical protein identified by similarity to OMNI:TP0088 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0066 TDE0067 TDE0067 TDE0067 74031 75278 - cyclic nucleotide-binding protein identified by match to protein family HMM PF00027 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0067 TDE0068 TDE0068 TDE0068 75437 76672 + diaminopimelate aminotransferase catalyzes the transamination of diaminopimelate with 2-oxoglutarate to produce tetrahydrodipicolinate and glutamate gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0068 TDE0069 TDE0069 TDE0069 76691 77707 + hypothetical protein identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00238 gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0069 TDE0070 TDE0070 TDE0070 77853 78680 + sigma-70 family RNA polymerase sigma factor identified by match to protein family HMM PF04542 gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0070 TDE0071 TDE0071 TDE0071 78742 80982 + U32 family peptidase identified by match to protein family HMM PF01136 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0071 TDE0072 TDE0072 TDE0072 81061 83199 + methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0072 TDE0073 TDE0073 TDE0073 83249 84172 - riboflavin biosynthesis protein RibF identified by similarity to SP:P08391%3B match to protein family HMM PF01687 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0073 TDE0074 TDE0074 TDE0074 84246 85589 - amino acid permease identified by match to protein family HMM PF00324 gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0074 TDE0075 TDE0075 TDE0075 85617 86663 - sorbitol dehydrogenase identified by match to protein family HMM PF00107 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0075 TDE0076 TDE0076 TDE0076 86679 87476 - aldolase identified by similarity to SP:Q57843%3B match to protein family HMM PF01791 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0076 TDE0077 TDE0077 grdE-1 grdE-1 87512 88822 - glycine reductase complex proprotein GrdE1 identified by similarity to GP:11065687 gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0077 TDE0078 TDE0078 grdB-1 grdB-1 88835 90166 - glycine reductase complex selenoprotein GrdB1 Selenoprotein.identified by similarity to SP:P52217%3B match to protein family HMM TIGR01918 gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0078 TDE0079 TDE0079 TDE0079 90185 90760 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0079 TDE0080 TDE0080 gbsA gbsA 90818 92302 - betaine aldehyde dehydrogenase identified by similarity to SP:P71016%3B match to protein family HMM PF00171 gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0080 TDE0081 TDE0081 TDE0081 92643 94031 - hypothetical protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0081 TDE0082 TDE0082 TDE0082 94024 94341 - MerR family transcriptional regulator identified by match to protein family HMM PF00376 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0082 TDE0083 TDE0083 engA engA 94344 95774 - GTP-binding protein EngA EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0083 TDE0084 TDE0084 ptsI ptsI 95761 97545 - phosphoenolpyruvate-protein phosphotransferase identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0084 TDE0085 TDE0085 TDE0085 97686 101105 - ATP-dependent DNA helicase UvrD identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01612 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0085 TDE0086 TDE0086 TDE0086 101129 103966 - hypothetical protein identified by similarity to SP:O83870%3B match to protein family HMM TIGR01612 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0086 TDE0087 TDE0087 trkA trkA 104079 105479 + potassium transporter peripheral membrane protein involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0087 TDE0088 TDE0088 trkH trkH 105487 106929 + Trk system potassium uptake protein TrkH identified by similarity to SP:P21166%3B match to protein family HMM PF02386 gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0088 TDE0089 TDE0089 TDE0089 106965 108644 - transglutaminase identified by match to protein family HMM PF01841 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0089 TDE0090 TDE0090 TDE0090 108634 109296 - hypothetical protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0090 TDE0091 TDE0091 TDE0091 109280 109822 - RNA polymerase sigma-24 factor identified by similarity to SP:P34086%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545 gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0091 TDE0092 TDE0092 cysS cysS 109867 111345 - cysteinyl-tRNA synthetase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0092 TDE0093 TDE0093 TDE0093 111397 112368 + UDP-N-acetylenolpyruvoylglucosamine reductase identified by similarity to SP:P18579%3B match to protein family HMM PF01565%3B match to protein family HMM PF02873 gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0093 TDE0094 TDE0094 TDE0094 112359 112508 + hypothetical protein gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0094 TDE0095 TDE0095 TDE0095 112539 112682 + hypothetical protein gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0095 TDE0096 TDE0096 TDE0096 112863 114197 + NADH oxidase identified by similarity to GP:1199958%3B match to protein family HMM PF00070%3B match to protein family HMM PF02852 gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0096 TDE0097 TDE0097 TDE0097 114337 114861 + hypothetical protein identified by similarity to OMNI:SP0830 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0097 TDE0098 TDE0098 TDE0098 114932 115651 - hypothetical protein identified by similarity to OMNI:NTL03CP2311 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0098 TDE0099 TDE0099 TDE0099 115788 117074 + adenine-specific DNA modification methyltransferase identified by match to protein family HMM PF01555 gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0099 TDE0100 TDE0100 TDE0100 117064 119034 - hypothetical protein identified by similarity to OMNI:NTL01TT2166 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0100 TDE0101 TDE0101 TDE0101 119107 121251 - alpha-amylase identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0101 TDE0102 TDE0102 TDE0102 121315 122607 + cyclic nucleotide-binding protein identified by match to protein family HMM PF00027 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0102 TDE0103 TDE0103 TDE0103 122634 123776 - class-V aminotransferase identified by match to protein family HMM PF00266 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0103 TDE0104 TDE0104 TDE0104 123773 124804 - 3-dehydroquinate synthase identified by match to protein family HMM PF01761 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0104 TDE0105 TDE0105 TDE0105 124822 125544 - MTA/SAH nucleosidase identified by similarity to SP:O32028%3B match to protein family HMM PF01048%3B match to protein family HMM TIGR01704 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0105 TDE0106 TDE0106 TDE0106 125632 126636 - hypothetical protein identified by similarity to SP:O83966 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0106 TDE0107 TDE0107 TDE0107 126731 128356 - alpha-amylase identified by match to protein family HMM PF00128 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0107 TDE0108 TDE0108 TDE0108 128539 128847 + hypothetical protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0108 TDE0109 TDE0109 pheS pheS 128923 130470 - phenylalanyl-tRNA synthetase subunit alpha catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0109 TDE0110 TDE0110 TDE0110 130721 131752 + M23/M37 peptidase identified by match to protein family HMM PF01551 gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0110 TDE0111 TDE0111 TDE0111 131755 132174 + hypothetical protein identified by similarity to OMNI:TP0048%3B match to protein family HMM PF04519 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0111 TDE0112 TDE0112 TDE0112 132184 132744 + hypothetical protein identified by similarity to OMNI:TP0047%3B match to protein family HMM PF03885 gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0112 TDE0113 TDE0113 TDE0113 132755 133669 + tpl protein identified by similarity to SP:P45685%3B match to protein family HMM PF04468 gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0113 TDE0114 TDE0114 TDE0114 133671 134090 - iron-dependent transcriptional regulator identified by match to protein family HMM PF01325%3B match to protein family HMM PF02742 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0114 TDE0115 TDE0115 TDE0115 134194 134841 + hypothetical protein identified by similarity to OMNI:TP0557 gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0115 TDE0116 TDE0116 TDE0116 134849 135730 + hypothetical protein identified by similarity to OMNI:TP0558 gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0116 TDE0117 TDE0117 TDE0117 135753 136667 + lipoprotein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0117 TDE0118 TDE0118 TDE0118 136664 137137 - hypothetical protein identified by similarity to SP:O83912 gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0118 TDE0119 TDE0119 fliS fliS 137148 137588 - flagellar protein FliS identified by similarity to SP:P39739%3B match to protein family HMM PF02561%3B match to protein family HMM TIGR00208 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0119 TDE0120 TDE0120 TDE0120 137788 138987 + hypothetical protein identified by similarity to OMNI:NTL01TT0719 gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0120 TDE0121 TDE0121 TDE0121 139010 140575 + hypothetical protein identified by similarity to GP:21106502 gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0121 TDE0122 TDE0122 TDE0122 140616 141629 - dihydrouridine synthase identified by match to protein family HMM PF01207 gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0122 TDE0123 TDE0123 TDE0123 141633 142313 - hypothetical protein identified by similarity to SP:O83948 gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0123 TDE0124 TDE0124 TDE0124 142334 142963 - rhomboid identified by match to protein family HMM PF01694 gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0124 TDE0125 TDE0125 TDE0125 142985 144100 - diguanylate cyclase identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0125 TDE0126 TDE0126 TDE0126 144081 145727 - hypothetical protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0126 TDE0127 TDE0127 TDE0127 145890 146204 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0127 TDE0128 TDE0128 TDE0128 146380 148785 + HAMP domain/GGDEF domain/EAL identified by match to protein family HMM PF00563%3B match to protein family HMM PF00672%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0128 TDE0129 TDE0129 pyrB pyrB 148782 150389 - bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0129 TDE0130 TDE0130 TDE0130 150685 152058 + sodium/dicarboxylate symporter identified by match to protein family HMM PF00375 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0130 TDE0131 TDE0131 TDE0131 152069 152161 + hypothetical protein gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0131 TDE0132 TDE0132 TDE0132 152186 152356 + hypothetical protein identified by similarity to OMNI:BBE09 gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0132 TDE0133 TDE0133 TDE0133 152513 153262 + GntR family transcriptional regulator identified by match to protein family HMM PF00392 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0133 TDE0134 TDE0134 TDE0134 153544 155070 + oxidoreductase%2C FAD-dependent identified by similarity to GP:19713620%3B match to protein family HMM PF01266%3B match to protein family HMM PF04324 gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0134 TDE0135 TDE0135 TDE0135 155067 156437 + pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070 gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0135 TDE0136 TDE0136 TDE0136 156427 156783 + hypothetical protein identified by similarity to OMNI:NTL01TT1860 gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0136 TDE0137 TDE0137 TDE0137 156780 158339 + carbohydrate kinase identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782 gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0137 TDE0138 TDE0138 TDE0138 158361 160121 + alkyl-dihydroxyacetonephosphate synthase identified by similarity to SP:O00116%3B match to protein family HMM PF01565%3B match to protein family HMM PF02913 gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0138 TDE0139 TDE0139 TDE0139 160211 162673 - hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0139 TDE0140 TDE0140 TDE0140 162871 163947 + ISTde2%2C transposase identified by similarity to GP:15146033%3B match to protein family HMM PF00665%3B match to protein family HMM TIGR01199 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0140 TDE0141 TDE0141 TDE0141 164021 164125 + hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0141 TDE0142 TDE0142 TDE0142 164069 164164 - hypothetical protein gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0142 TDE0143 TDE0143 TDE0143 164153 165163 + thiamine ABC transporter thiamine-binding protein identified by similarity to SP:P31550%3B match to protein family HMM PF01547%3B match to protein family HMM TIGR01254 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0143 TDE0144 TDE0144 TDE0144 165147 166829 + thiamine ABC transporter permease identified by similarity to SP:P31549%3B match to protein family HMM PF00528 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0144 TDE0145 TDE0145 TDE0145 166840 167472 + thiamine ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0145 TDE0146 TDE0146 TDE0146 167525 168727 - amidohydrolase identified by similarity to OMNI:NTL01FN1639%3B match to protein family HMM PF01546%3B match to protein family HMM TIGR01891 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0146 TDE0147 TDE0147 TDE0147 168879 169073 - hypothetical protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0147 TDE0148 TDE0148 TDE0148 169111 169980 + histidine kinase-related ATPase identified by match to protein family HMM PF02518 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0148 TDE0149 TDE0149 TDE0149 169961 170566 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0149 TDE0150 TDE0150 TDE0150 170578 171885 + ribonuclease BN-like identified by match to protein family HMM PF00027%3B match to protein family HMM PF03631 gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0150 TDE0151 TDE0151 TDE0151 171935 173191 - YeeE/YedE family integral membrane protein identified by similarity to GP:18144395%3B match to protein family HMM PF04143 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0151 TDE0152 TDE0152 TDE0152 173212 174567 - amino acid permease identified by match to protein family HMM PF00324 gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0152 TDE0153 TDE0153 TDE0153 174578 176275 - coenzyme A disulfide reductase identified by similarity to GP:2792490%3B match to protein family HMM PF00070%3B match to protein family HMM PF00581%3B match to protein family HMM PF02852 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0153 TDE0154 TDE0154 TDE0154 176298 178376 - adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0154 TDE0155 TDE0155 TDE0155 178373 180244 - adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211 gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0155 TDE0156 TDE0156 TDE0156 180434 183661 - adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211%3B match to protein family HMM TIGR01612 gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0156 TDE0157 TDE0157 TDE0157 183999 185771 + KHG/KDPG family aldolase/carbohydrate kinase identified by match to protein family HMM PF00294%3B match to protein family HMM PF01081%3B match to protein family HMM TIGR01182 gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0157 TDE0158 TDE0158 TDE0158 185814 186038 - hypothetical protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0158 TDE0159 TDE0159 TDE0159 186028 186505 - conserved hypothetical protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to GP:1653879 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0159 TDE0160 TDE0160 TDE0160 187235 187786 - hypothetical protein gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0160 TDE0161 TDE0161 TDE0161 187815 187919 - hypothetical protein gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0161 TDE0162 TDE0162 TDE0162 188038 192942 + hypothetical protein gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0162 TDE0163 TDE0163 TDE0163 193036 193473 - flavodoxin identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753 gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0163 TDE0164 TDE0164 TDE0164 193507 194088 - hypothetical protein identified by similarity to GP:15023457 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0164 TDE0165 TDE0165 TDE0165 194262 195116 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0165 TDE0166 TDE0166 TDE0166 195140 195961 - hypothetical protein gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0166 TDE0167 TDE0167 TDE0167 195963 196664 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0167 TDE0168 TDE0168 TDE0168 196757 197158 - GntR family transcriptional regulator identified by match to protein family HMM PF00392 gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0168 TDE0169 TDE0169 TDE0169 197224 198882 - methyl-accepting chemotaxis protein identified by similarity to GP:15024324%3B match to protein family HMM PF00015 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0169 TDE0170 TDE0170 TDE0170 198929 200080 + nuclease SbcCD subunit D identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0170 TDE0171 TDE0171 TDE0171 200105 203197 + nuclease SbcCD%2C C subunit identified by match to protein family HMM TIGR01612 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0171 TDE0172 TDE0172 uppP uppP 203276 204085 + undecaprenyl pyrophosphate phosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0172 TDE0173 TDE0173 TDE0173 204110 206650 + FtsK/SpoIIIE family protein identified by similarity to SP:P21458%3B match to protein family HMM PF01580 gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0173 TDE0174 TDE0174 TDE0174 206674 208110 + nicotinate phosphoribosyltransferase catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0174 TDE0175 TDE0175 pcp pcp 208219 208872 - pyrrolidone-carboxylate peptidase identified by match to protein family HMM PF01470%3B match to protein family HMM TIGR00504 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0175 TDE0176 TDE0176 TDE0176 208890 209888 - hypothetical protein gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0176 TDE0177 TDE0177 TDE0177 209881 210555 - hypothetical protein identified by similarity to OMNI:NTL01TT1496 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0177 TDE0178 TDE0178 TDE0178 210628 212718 - methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0178 TDE0179 TDE0179 TDE0179 212861 212971 - hypothetical protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0179 TDE0180 TDE0180 TDE0180 212944 213108 - hypothetical protein gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0180 TDE0181 TDE0181 TDE0181 213077 215167 - methyl-accepting chemotaxis protein identified by similarity to SP:P39217%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0181 TDE0182 TDE0182 TDE0182 215224 216873 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0182 TDE0183 TDE0183 TDE0183 216873 218681 - ABC transporter permease identified by match to protein family HMM PF00528 gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0183 TDE0184 TDE0184 TDE0184 218888 220648 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0184 TDE0185 TDE0185 TDE0185 220638 222395 + ABC transporter ATP-binding protein identified by similarity to SP:P33116%3B match to protein family HMM PF00005 gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0185 TDE0186 TDE0186 TDE0186 222463 223788 - hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0186 TDE0187 TDE0187 TDE0187 223985 224752 + carboxylesterase identified by similarity to SP:Q06174 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0187 TDE0188 TDE0188 TDE0188 224861 225760 + adenosine deaminase catalyzes the formation of inosine from adenosine gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0188 TDE0189 TDE0189 TDE0189 225762 226550 - hypothetical protein identified by match to protein family HMM PF01925 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0189 TDE0190 TDE0190 TDE0190 226569 227456 - hypothetical protein identified by similarity to OMNI:TP0986%3B match to protein family HMM PF00892 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0190 TDE0191 TDE0191 TDE0191 227468 227896 - acetyltransferase identified by match to protein family HMM PF00583 gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0191 TDE0192 TDE0192 TDE0192 227907 228671 - hypothetical protein identified by similarity to OMNI:NTL01LM2253 gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0192 TDE0193 TDE0193 TDE0193 228703 230679 - hypothetical protein identified by similarity to SP:O83066 gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0193 TDE0194 TDE0194 TDE0194 230829 231971 - hypothetical protein identified by similarity to OMNI:BB0325 gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0194 TDE0195 TDE0195 TDE0195 232032 232601 - acetyltransferase identified by match to protein family HMM PF00583 gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0195 TDE0196 TDE0196 TDE0196 232711 232905 + hypothetical protein gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0196 TDE0197 TDE0197 TDE0197 232905 233285 + PilT identified by similarity to OMNI:NTL01PA0401%3B match to protein family HMM PF01850 gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0197 TDE0198 TDE0198 TDE0198 233295 234284 + hypothetical protein identified by similarity to OMNI:NTL01BM1377 gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0198 TDE0199 TDE0199 TDE0199 234289 234798 - hypothetical protein gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0199 TDE0200 TDE0200 TDE0200 234761 235432 + tetrapyrrole methylase identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0200 TDE0201 TDE0201 TDE0201 235503 235784 + hypothetical protein identified by similarity to SP:O83939 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0201 TDE0202 TDE0202 TDE0202 235960 236982 - hypothetical protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0202 TDE0203 TDE0203 TDE0203 236810 237118 + hypothetical protein gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0203 TDE0204 TDE0204 gltX gltX 237108 238628 + glutamyl-tRNA synthetase Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0204 TDE0205 TDE0205 TDE0205 238684 239748 + adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0205 TDE0206 TDE0206 TDE0206 239761 241617 - surface antigen identified by similarity to OMNI:PG1374%3B match to protein family HMM PF00560 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0206 TDE0207 TDE0207 TDE0207 241742 243097 + GntP family permease identified by match to protein family HMM PF02447 gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0207 TDE0208 TDE0208 glxK glxK 243122 244288 + glycerate kinase identified by similarity to SP:P77364%3B match to protein family HMM PF02595%3B match to protein family HMM TIGR00045 gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0208 TDE0209 TDE0209 TDE0209 244335 245621 + arsenical pump membrane protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0209 TDE0210 TDE0210 cobO cobO 245691 246206 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase catalyzes the formation of adenosylcob(III)yrinic acid a%2Cc-diamide from cob(I)yrinic acid a%2Cc-diamide gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0210 TDE0211 TDE0211 TDE0211 246645 247376 - ABC transporter permease identified by similarity to SP:P75851%3B match to protein family HMM PF00528 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0211 TDE0212 TDE0212 TDE0212 247348 248325 - hypothetical protein identified by similarity to GP:18145149 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0212 TDE0213 TDE0213 TDE0213 248408 249550 - TPR identified by match to protein family HMM PF00515 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0213 TDE0214 TDE0214 TDE0214 249595 250539 - hypothetical protein identified by similarity to OMNI:TP0086 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0214 TDE0215 TDE0215 TDE0215 251353 251460 - hypothetical protein gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0215 TDE0216 TDE0216 TDE0216 251445 252680 + hypothetical protein identified by similarity to OMNI:NTL03CP1049 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0216 TDE0217 TDE0217 ogt ogt 252688 253206 + methylated-DNA--protein-cysteine methyltransferase identified by similarity to SP:P11742%3B match to protein family HMM PF01035%3B match to protein family HMM PF02870%3B match to protein family HMM TIGR00589 gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0217 TDE0218 TDE0218 TDE0218 253299 253427 + hypothetical protein gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0218 TDE0219 TDE0219 TDE0219 253446 253934 - hypothetical protein identified by similarity to SP:O83050 gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0219 TDE0220 TDE0220 TDE0220 253955 254095 - hypothetical protein gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0220 TDE0221 TDE0221 TDE0221 254136 254786 - hypothetical protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0221 TDE0222 TDE0222 TDE0222 254786 255310 - acetyltransferase identified by match to protein family HMM PF00583 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0222 TDE0223 TDE0223 TDE0223 255335 255994 - hypothetical protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0223 TDE0224 TDE0224 TDE0224 256088 256207 - hypothetical protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0224 TDE0225 TDE0225 TDE0225 256195 256467 - prevent-host-death identified by match to protein family HMM TIGR01552 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0225 TDE0226 TDE0226 TDE0226 256484 256783 - hypothetical protein gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0226 TDE0227 TDE0227 TDE0227 257076 259709 + adenine-specific DNA modification methyltransferase identified by match to protein family HMM PF01555 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0227 TDE0228 TDE0228 TDE0228 259701 260693 - hypothetical protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0228 TDE0229 TDE0229 TDE0229 260956 262836 - ATPase gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0229 TDE0230 TDE0230 recF recF 262889 263971 - DNA replication and repair protein RecF identified by similarity to SP:P49999%3B match to protein family HMM TIGR00611 gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0230 TDE0231 TDE0231 dnaN dnaN 263980 265083 - DNA polymerase III subunit beta identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663 gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0231 TDE0232 TDE0232 TDE0232 265354 265884 + appr-1-p processing identified by match to protein family HMM PF01661 gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0232 TDE0233 TDE0233 TDE0233 265877 267010 - fic identified by match to protein family HMM PF02661 gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0233 TDE0234 TDE0234 TDE0234 267193 269004 + ABC transporter ATP-binding protein identified by similarity to SP:P33116%3B match to protein family HMM PF00005 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0234 TDE0235 TDE0235 TDE0235 269062 269313 + hypothetical protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0235 TDE0236 TDE0236 TDE0236 269297 269707 + PilT identified by similarity to OMNI:NTL01TT0993%3B match to protein family HMM PF01850 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0236 TDE0237 TDE0237 TDE0237 269751 271280 - hypothetical protein identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277 gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0237 TDE0238 TDE0238 trx trx 271520 271843 + thioredoxin%2C selenocysteine-containing Selenoprotein.identified by similarity to SP:P80579%3B match to protein family HMM PF00085%3B match to protein family HMM TIGR01068 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0238 TDE0239 TDE0239 grdD grdD 271918 273072 - glycine reductase complex protein GrdD identified by similarity to GP:2708734%3B match to protein family HMM PF02504 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0239 TDE0240 TDE0240 grdC grdC 273085 274623 - glycine reductase complex protein GrdC identified by similarity to SP:P54935 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0240 TDE0241 TDE0241 TDE0241 274791 275393 - hypothetical protein gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0241 TDE0242 TDE0242 TDE0242 275404 276114 - hypothetical protein gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0242 TDE0243 TDE0243 TDE0243 276116 277591 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0243 TDE0244 TDE0244 TDE0244 277579 279303 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0244 TDE0245 TDE0245 TDE0245 279315 281033 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0245 TDE0246 TDE0246 TDE0246 281186 281755 - TetR family transcriptional regulator identified by similarity to OMNI:NTL01FN1049%3B match to protein family HMM PF00440 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0246 TDE0247 TDE0247 TDE0247 281864 282106 - magnesium chelatase%2C subunit chII%2C truncation%3B this gene contains a premature stop which is not the result of sequencing error%3B identified by similarity to SP:P51634 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0247 TDE0248 TDE0248 TDE0248 282208 282576 + hypothetical protein identified by similarity to GP:1788093 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0248 TDE0249 TDE0249 TDE0249 282679 283242 + flavoredoxin identified by similarity to SP:Q9KIT1 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0249 TDE0250 TDE0250 TDE0250 283400 284725 - sodium-dependent transporter identified by match to protein family HMM PF00209 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0250 TDE0251 TDE0251 tnaA tnaA 284807 286186 - tryptophanase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0251 TDE0252 TDE0252 TDE0252 286403 287221 + hypothetical protein gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0252 TDE0253 TDE0253 TDE0253 287292 288785 + hypothetical protein identified by similarity to OMNI:NTL01NM02078 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0253 TDE0254 TDE0254 TDE0254 288794 289372 + hypothetical protein identified by similarity to GP:19715137 gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0254 TDE0255 TDE0255 TDE0255 289408 290832 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0255 TDE0256 TDE0256 TDE0256 290832 291530 - hypothetical protein identified by similarity to OMNI:EF0580 gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0256 TDE0257 TDE0257 TDE0257 291586 292188 - hypothetical protein gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0257 TDE0258 TDE0258 TDE0258 292222 292974 - UbiE/COQ5 family methlytransferase identified by match to protein family HMM PF01209 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0258 TDE0259 TDE0259 TDE0259 293397 293849 + MarR family transcriptional regulator identified by similarity to OMNI:NTL01BH2064%3B match to protein family HMM PF01047 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0259 TDE0260 TDE0260 TDE0260 293874 294785 + iron-sulfur cluster-binding protein identified by match to protein family HMM PF00037 gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0260 TDE0261 TDE0261 TDE0261 294782 295240 + flavodoxin An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0261 TDE0262 TDE0262 TDE0262 295317 296390 - hypothetical protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0262 TDE0263 TDE0263 TDE0263 296490 297032 - spermidine N1-acetyltransferase identified by similarity to SP:P37354%3B match to protein family HMM PF00583 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0263 TDE0264 TDE0264 TDE0264 297111 297377 - CopG identified by match to protein family HMM PF01402 gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0264 TDE0265 TDE0265 TDE0265 297353 297608 - conserved hypothetical protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to OMNI:NTL01NS0753 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0265 TDE0266 TDE0266 TDE0266 297857 298648 - hypothetical protein identified by similarity to OMNI:NTL01SMB00904 gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0266 TDE0267 TDE0267 TDE0267 298653 299198 - HAM1 protein identified by match to protein family HMM PF01725 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0267 TDE0268 TDE0268 TDE0268 299309 300139 - hypothetical protein gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0268 TDE0269 TDE0269 TDE0269 300286 300777 - hypothetical protein gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0269 TDE0270 TDE0270 TDE0270 300935 301960 - hypothetical protein gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0270 TDE0271 TDE0271 TDE0271 302116 302259 + hypothetical protein gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0271 TDE0272 TDE0272 TDE0272 302346 302960 - hypothetical protein gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0272 TDE0273 TDE0273 TDE0273 302957 304723 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0273 TDE0274 TDE0274 TDE0274 304720 306513 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0274 TDE0275 TDE0275 TDE0275 306773 307438 + CAAX amino terminal protease identified by match to protein family HMM PF02517 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0275 TDE0276 TDE0276 TDE0276 307493 308119 - hypothetical protein identified by match to protein family HMM PF01966 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0276 TDE0277 TDE0277 TDE0277 308199 308594 - hypothetical protein identified by similarity to OMNI:NTL01NS0148 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0277 TDE0278 TDE0278 TDE0278 308591 308872 - hypothetical protein gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0278 TDE0279 TDE0279 TDE0279 308898 309872 - hypothetical protein identified by similarity to OMNI:NTL01BS0114 gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0279 TDE0280 TDE0280 TDE0280 309985 310386 - PilT identified by match to protein family HMM PF01850 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0280 TDE0281 TDE0281 TDE0281 310383 310580 - hypothetical protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0281 TDE0282 TDE0282 TDE0282 310745 312214 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0282 TDE0283 TDE0283 TDE0283 312211 312915 - transporter identified by similarity to GP:23325909%3B match to protein family HMM PF02361 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0283 TDE0284 TDE0284 TDE0284 312916 313518 - hypothetical protein identified by similarity to OMNI:NTL02SP1290 gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0284 TDE0285 TDE0285 fusA-1 fusA-1 313762 315813 + elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0285 TDE0286 TDE0286 TDE0286 315858 317468 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0286 TDE0287 TDE0287 TDE0287 317465 319150 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0287 TDE0288 TDE0288 TDE0288 319214 320134 - hypothetical protein identified by similarity to OMNI:NTL01FN1552 gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0288 TDE0289 TDE0289 TDE0289 320161 320736 - hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0289 TDE0290 TDE0290 TDE0290 320789 320884 - hypothetical protein gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0290 TDE0291 TDE0291 TDE0291 320884 321150 - hypothetical protein identified by similarity to GP:3088624 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0291 TDE0292 TDE0292 TDE0292 321265 322104 - hypothetical protein identified by similarity to OMNI:VC0187 gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0292 TDE0293 TDE0293 TDE0293 322108 323511 - MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0293 TDE0294 TDE0294 TDE0294 323563 324300 - TrkA family protein identified by similarity to GP:3288678%3B match to protein family HMM PF02080%3B match to protein family HMM PF02254 gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0294 TDE0295 TDE0295 gyrA gyrA 324310 326757 - DNA gyrase subunit A identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063 gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0295 TDE0296 TDE0296 TDE0296 326932 327831 - formiminotransferase identified by match to protein family HMM PF02971 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0296 TDE0297 TDE0297 TDE0297 327886 328068 - hypothetical protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0297 TDE0298 TDE0298 TDE0298 328103 330061 + hypothetical protein gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0298 TDE0299 TDE0299 mutT mutT 330220 330639 + mutator mutT protein identified by similarity to SP:P08337%3B match to protein family HMM PF00293 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0299 TDE0300 TDE0300 TDE0300 330983 332413 + leucyl aminopeptidase catalyzes the removal of N-terminal amino acids preferably leucine from various peptides gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0300 TDE0301 TDE0301 TDE0301 332487 333290 + tetracenomycin polyketide synthesis O-methyltransferase TcmP identified by similarity to SP:P39887 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0301 TDE0302 TDE0302 TDE0302 333363 333641 + hypothetical protein identified by match to protein family HMM PF04221 gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0302 TDE0303 TDE0303 TDE0303 333638 333919 + hypothetical protein identified by similarity to OMNI:NTL02SP0253%3B match to protein family HMM PF03890 gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0303 TDE0304 TDE0304 TDE0304 334023 335552 + hypothetical protein gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0304 TDE0305 TDE0305 ychF ychF 335735 336841 - GTP-dependent nucleic acid-binding protein EngD translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0305 TDE0306 TDE0306 sppA sppA 336880 338709 - signal peptide peptidase SppA identified by match to protein family HMM PF01343%3B match to protein family HMM TIGR00705%3B match to protein family HMM TIGR00706 gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0306 TDE0307 TDE0307 TDE0307 338795 339700 + hypothetical protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0307 TDE0308 TDE0308 TDE0308 339727 340776 + hypothetical protein gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0308 TDE0309 TDE0309 TDE0309 340806 341756 + lipoprotein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0309 TDE0310 TDE0310 TDE0310 341760 342872 + hypothetical protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0310 TDE0311 TDE0311 thyX thyX 342956 343756 + FAD-dependent thymidylate synthase flavin dependent thymidylate synthase%3B ThyX%3B thymidylate synthase complementing protein%3B catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate%3B the enzyme from Mycobacterium tuberculosis forms homotetramers%3B uses FAD as a cofactor gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0311 TDE0312 TDE0312 TDE0312 343775 345499 + TrkH family potassium uptake protein identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0312 TDE0313 TDE0313 TDE0313 345514 346206 + TrkA family protein identified by similarity to GP:3288678%3B match to protein family HMM PF02254 gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0313 TDE0314 TDE0314 TDE0314 346217 346969 + hypothetical protein identified by similarity to SP:O83174 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0314 TDE0315 TDE0315 TDE0315 347078 348862 + ABC transporter ATP-binding protein/peptidase identified by similarity to SP:P33116%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0315 TDE0316 TDE0316 TDE0316 348960 350549 - ABC transporter ATP-binding protein/permease identified by similarity to SP:P27299%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0316 TDE0317 TDE0317 TDE0317 350796 351176 + hypothetical protein identified by similarity to OMNI:NTL01TT1546 gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0317 TDE0318 TDE0318 TDE0318 351222 351536 + hypothetical protein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0318 TDE0319 TDE0319 TDE0319 351600 352607 + hypothetical protein identified by similarity to GP:10173345 gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0319 TDE0320 TDE0320 TDE0320 352570 353868 - hypothetical protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0320 TDE0321 TDE0321 TDE0321 353865 355184 - hypothetical protein identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0321 TDE0322 TDE0322 TDE0322 355196 355495 - P-II family regulatory protein gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0322 TDE0323 TDE0323 TDE0323 355840 357285 - hypothetical protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0323 TDE0324 TDE0324 TDE0324 357584 358204 + hypothetical protein gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0324 TDE0325 TDE0325 TDE0325 358191 358793 + hypothetical protein gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0325 TDE0326 TDE0326 recQ recQ 358838 360718 - ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389 gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0326 TDE0327 TDE0327 TDE0327 361021 365208 + CRISPR-associated Cas5e identified by similarity to GP:23095344%3B match to protein family HMM PF01844%3B match to protein family HMM TIGR01612 gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0327 TDE0328 TDE0328 cas1 cas1 365205 366077 + CRISPR-associated Cas1 identified by match to protein family HMM TIGR00287 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0328 TDE0329 TDE0329 TDE0329 366082 366387 + CRISPR-associated Cas2 identified by match to protein family HMM TIGR01573 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0329 TDE0330 TDE0330 TDE0330 366384 367058 + CRISPR-associated Csn2 identified by similarity to OMNI:NTL01LI2724%3B match to protein family HMM TIGR01866 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0330 TDE0331 TDE0331 TDE0331 370932 371033 - hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0331 TDE0332 TDE0332 TDE0332 371080 371706 + TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0332 TDE0333 TDE0333 TDE0333 371788 373143 + MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0333 TDE0334 TDE0334 TDE0334 373386 374138 - hypothetical protein gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0334 TDE0335 TDE0335 nrdF nrdF 374210 375265 - ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0335 TDE0336 TDE0336 TDE0336 375283 376401 - hypothetical protein identified by similarity to SP:O83564%3B match to protein family HMM PF01594 gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0336 TDE0337 TDE0337 nagB nagB 376385 377197 - glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0337 TDE0338 TDE0338 TDE0338 377457 377924 + methyl-accepting chemotaxis protein-like protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0338 TDE0339 TDE0339 TDE0339 378011 378628 + TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0339 TDE0340 TDE0340 TDE0340 378779 379666 + fructose-1%2C6-bisphosphate aldolase catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate in glycolysis gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0340 TDE0341 TDE0341 nrdA nrdA 379679 382216 - ribonucleotide-diphosphate reductase subunit alpha catalyzes the rate limiting step in dNTP synthesis gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0341 TDE0342 TDE0342 mviN mviN 382218 383831 - integral membrane protein MviN identified by match to protein family HMM PF03023%3B match to protein family HMM TIGR01695 gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0342 TDE0343 TDE0343 TDE0343 384337 385455 - alpha/beta fold family hydrolase identified by match to protein family HMM PF00561 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0343 TDE0344 TDE0344 TDE0344 385457 385678 - AbrB family transcriptional regulator identified by match to protein family HMM TIGR01439 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0344 TDE0345 TDE0345 dmcB dmcB 385834 387066 - methyl-accepting chemotaxis protein DmcB identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0345 TDE0346 TDE0346 prtB prtB 387163 387987 - protease PrtB identified by match to protein family HMM PF02743 gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0346 TDE0347 TDE0347 dmcA dmcA 388140 390329 - methyl-accepting chemotaxis protein DmcA identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0347 TDE0348 TDE0348 TDE0348 390597 391193 + TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0348 TDE0349 TDE0349 TDE0349 391233 393710 + phosphoenolpyruvate synthase identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326 gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0349 TDE0350 TDE0350 TDE0350 393712 395079 + MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0350 TDE0351 TDE0351 ldh ldh 395141 396088 - L-lactate dehydrogenase identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771 gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0351 TDE0352 TDE0352 rpiB rpiB 396347 396799 + ribose 5-phosphate isomerase B identified by similarity to SP:P37351%3B match to protein family HMM PF02502%3B match to protein family HMM TIGR00689 gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0352 TDE0353 TDE0353 TDE0353 396833 398428 - GDSL family lipase/acylhydrolase identified by match to protein family HMM PF00657 gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0353 TDE0354 TDE0354 TDE0354 398507 399061 + general stress protein 14 identified by similarity to SP:P80871%3B match to protein family HMM PF02525 gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0354 TDE0355 TDE0355 TDE0355 399145 399717 + hypothetical protein identified by similarity to OMNI:SP1041 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0355 TDE0356 TDE0356 TDE0356 399822 400178 - hypothetical protein gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0356 TDE0357 TDE0357 TDE0357 400198 400833 - hypothetical protein identified by similarity to GP:15025542 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0357 TDE0358 TDE0358 cinI cinI 400883 401728 - cinnamoyl ester hydrolase identified by similarity to GP:1622732 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0358 TDE0359 TDE0359 TDE0359 402283 404190 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0359 TDE0360 TDE0360 TDE0360 404192 405934 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0360 TDE0361 TDE0361 TDE0361 406129 407502 + transporter identified by similarity to SP:P19933%3B match to protein family HMM PF03616 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0361 TDE0362 TDE0362 TDE0362 407591 409534 - Ig-like protein identified by match to protein family HMM PF02368 gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0362 TDE0363 TDE0363 TDE0363 409626 410069 - hypothetical protein identified by similarity to OMNI:NTL03CP1090%3B match to protein family HMM TIGR01764 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0363 TDE0364 TDE0364 TDE0364 410139 411695 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0364 TDE0365 TDE0365 TDE0365 411813 412511 - hypothetical protein identified by similarity to OMNI:NTL01MM2291%3B match to protein family HMM PF01863 gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0365 TDE0366 TDE0366 hsdR-1 hsdR-1 412512 415631 - type I restriction-modification system%2C R subunit identified by match to protein family HMM PF04313%3B match to protein family HMM TIGR00348%3B match to protein family HMM TIGR01612 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0366 TDE0367 TDE0367 TDE0367 415624 416643 - hypothetical protein identified by similarity to OMNI:NMB0830 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0367 TDE0368 TDE0368 TDE0368 416647 418335 - type I restriction-modification system%2C S subunit identified by match to protein family HMM PF01420 gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0368 TDE0369 TDE0369 hsdM-1 hsdM-1 418446 421061 - type I restriction-modification system%2C M subunit identified by match to protein family HMM PF02384%3B match to protein family HMM PF02506%3B match to protein family HMM TIGR00497 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0369 TDE0370 TDE0370 murD murD 421224 422654 + UDP-N-acetylmuramoylalanine--D-glutamate ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01087 gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0370 TDE0371 TDE0371 TDE0371 422827 424674 + hypothetical protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0371 TDE0372 TDE0372 TDE0372 424722 426266 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0372 TDE0373 TDE0373 TDE0373 426241 427812 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0373 TDE0374 TDE0374 TDE0374 428004 429290 - group 1 glycosyl transferase identified by match to protein family HMM PF00534 gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0374 TDE0375 TDE0375 TDE0375 429287 430237 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0375 TDE0376 TDE0376 TDE0376 430260 431879 - ABC transporter permease identified by match to protein family HMM PF00528 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0376 TDE0377 TDE0377 TDE0377 431975 432067 - hypothetical protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0377 TDE0378 TDE0378 TDE0378 432304 432576 + hypothetical protein identified by similarity to OMNI:NMB0256 gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0378 TDE0379 TDE0379 TDE0379 432598 433437 + hypothetical protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0379 TDE0380 TDE0380 TDE0380 433491 434042 + hypothetical protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0380 TDE0381 TDE0381 TDE0381 434072 434521 + hypothetical protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0381 TDE0382 TDE0382 TDE0382 434533 434745 + hypothetical protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0382 TDE0383 TDE0383 TDE0383 434749 435219 + hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0383 TDE0384 TDE0384 TDE0384 435188 435745 + hypothetical protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0384 TDE0385 TDE0385 TDE0385 435779 437347 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0385 TDE0386 TDE0386 TDE0386 437395 438411 - ABC transporter periplasmic substrate-binding protein identified by match to protein family HMM PF01547 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0386 TDE0387 TDE0387 hgdC hgdC 438567 439316 + (R)-hydroxyglutaryl-CoA dehydratase activator identified by similarity to SP:P11568%3B match to protein family HMM PF01869%3B match to protein family HMM TIGR00241 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0387 TDE0388 TDE0388 TDE0388 439313 440110 + hypothetical protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0388 TDE0389 TDE0389 TDE0389 440148 441386 + (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta identified by similarity to GP:38802 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0389 TDE0390 TDE0390 TDE0390 441386 441643 + hypothetical protein identified by similarity to OMNI:NTL01TT1740 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0390 TDE0391 TDE0391 TDE0391 441691 441939 - hypothetical protein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0391 TDE0392 TDE0392 TDE0392 441936 443114 - (R)-2-hydroxyglutaryl-CoA dehydratase subunit beta identified by similarity to GP:38802 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0392 TDE0393 TDE0393 TDE0393 443272 443919 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0393 TDE0394 TDE0394 TDE0394 444121 445083 + oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0394 TDE0395 TDE0395 TDE0395 445095 445949 + oligopeptide/dipeptide ABC transporter permease identified by similarity to SP:P42063%3B match to protein family HMM PF00528 gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0395 TDE0396 TDE0396 TDE0396 445952 446920 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by similarity to SP:P76027%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0396 TDE0397 TDE0397 TDE0397 446917 447894 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0397 TDE0398 TDE0398 TDE0398 447913 449496 + oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein identified by match to protein family HMM PF00496 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0398 TDE0399 TDE0399 TDE0399 449568 450905 + zinc carboxypeptidase identified by match to protein family HMM PF00246 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0399 TDE0400 TDE0400 TDE0400 450973 451893 - LysR family transcriptional regulator identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0400 TDE0401 TDE0401 TDE0401 451927 454320 - adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0401 TDE0402 TDE0402 TDE0402 454338 454442 - hypothetical protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0402 TDE0403 TDE0403 TDE0403 454573 455427 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0403 TDE0404 TDE0404 TDE0404 455449 455589 - hypothetical protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0404 TDE0405 TDE0405 TDE0405 455610 457241 + major outer sheath protein identified by similarity to GP:1143035%3B match to protein family HMM PF02707%3B match to protein family HMM PF02722 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0405 TDE0406 TDE0406 TDE0406 457370 458989 + hypothetical protein identified by similarity to GP:5931989 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0406 TDE0407 TDE0407 gltA gltA 459101 460612 - oxidoreductase function undetermined%3B similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0407 TDE0408 TDE0408 TDE0408 460626 461462 - ferredoxin-NADP(+) reductase subunit alpha identified by match to protein family HMM PF00175 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0408 TDE0409 TDE0409 TDE0409 461717 462193 + hypothetical protein gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0409 TDE0410 TDE0410 TDE0410 462193 463059 + M48 family peptidase identified by match to protein family HMM PF01435 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0410 TDE0411 TDE0411 TDE0411 463071 465155 + adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0411 TDE0412 TDE0412 TDE0412 465076 466467 + hypothetical protein gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0412 TDE0413 TDE0413 TDE0413 466478 467428 + lipoprotein gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0413 TDE0414 TDE0414 TDE0414 467400 467702 + hypothetical protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0414 TDE0415 TDE0415 TDE0415 467807 469075 + lipoprotein identified by match to protein family HMM TIGR01781 gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0415 TDE0416 TDE0416 TDE0416 469079 469582 + bacteriocin-type signal sequence gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0416 TDE0417 TDE0417 TDE0417 469579 469698 - hypothetical protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0417 TDE0418 TDE0418 TDE0418 469742 470953 + lipoprotein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0418 TDE0419 TDE0419 TDE0419 471063 472346 + hypothetical protein gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0419 TDE0420 TDE0420 TDE0420 472358 473545 + hypothetical protein gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0420 TDE0421 TDE0421 TDE0421 473556 474842 + lipoprotein identified by match to protein family HMM TIGR01781 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0421 TDE0422 TDE0422 TDE0422 474826 476670 + bacteriocin-type signal sequence gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0422 TDE0423 TDE0423 TDE0423 476741 478006 + hypothetical protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0423 TDE0424 TDE0424 TDE0424 478010 479833 + bacteriocin-type signal sequence gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0424 TDE0425 TDE0425 TDE0425 479840 482005 + bacteriocin ABC transporter ATP-binding/permease identified by similarity to PIR:A39203%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412%3B match to protein family HMM TIGR01193 gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0425 TDE0426 TDE0426 TDE0426 482021 483172 + bacteriocin ABC transporter bacteriocin-binding protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0426 TDE0427 TDE0427 TDE0427 483166 484539 + hypothetical protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0427 TDE0428 TDE0428 TDE0428 484543 485283 - TPR identified by match to protein family HMM PF00515 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0428 TDE0429 TDE0429 TDE0429 485295 485513 - hypothetical protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0429 TDE0430 TDE0430 TDE0430 485529 486545 - TPR identified by match to protein family HMM PF00515 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0430 TDE0431 TDE0431 TDE0431 486560 487684 - LysM domain-containing protein identified by match to protein family HMM PF01476 gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0431 TDE0432 TDE0432 TDE0432 487810 488283 - TPR identified by similarity to OMNI:NTL01NS3768%3B match to protein family HMM PF00515 gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0432 TDE0433 TDE0433 TDE0433 488643 488807 - hypothetical protein gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0433 TDE0434 TDE0434 TDE0434 489049 489624 + rubrerythrin identified by similarity to GP:6449424%3B match to protein family HMM PF02915 gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0434 TDE0435 TDE0435 TDE0435 489648 491351 - ATP-dependent DNA helicase RecQ identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR00614 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0435 TDE0436 TDE0436 recO recO 491414 492223 - recombination protein O identified by match to protein family HMM PF02565 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0436 TDE0437 TDE0437 TDE0437 492226 493695 - HEAT repeat-containing PBS lyase identified by match to protein family HMM PF03130 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0437 TDE0438 TDE0438 tgt tgt 493762 494901 - queuine tRNA-ribosyltransferase identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0438 TDE0439 TDE0439 TDE0439 495194 495913 - hypothetical protein gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0439 TDE0440 TDE0440 TDE0440 496091 496366 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0440 TDE0441 TDE0441 TDE0441 496466 496735 - hypothetical protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0441 TDE0442 TDE0442 TDE0442 496779 497813 - hypothetical protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0442 TDE0443 TDE0443 TDE0443 498078 499052 + hypothetical protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0443 TDE0444 TDE0444 TDE0444 499106 499831 + glutamine amidotransferase class I identified by match to protein family HMM PF00117 gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0444 TDE0445 TDE0445 TDE0445 499884 501164 + amino acid permease identified by match to protein family HMM PF00324 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0445 TDE0446 TDE0446 TDE0446 501409 502908 + fibronectin type III identified by match to protein family HMM PF00041 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0446 TDE0447 TDE0447 TDE0447 502898 505876 + TPR identified by match to protein family HMM PF00515%3B match to protein family HMM TIGR01612 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0447 TDE0448 TDE0448 deoC deoC 505936 506586 + deoxyribose-phosphate aldolase identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0448 TDE0449 TDE0449 TDE0449 506639 507121 - ferritin identified by match to protein family HMM PF00210 gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0449 TDE0450 TDE0450 TDE0450 507186 508619 - hypothetical protein identified by match to protein family HMM PF01546 gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0450 TDE0451 TDE0451 arcA arcA 508793 510025 + arginine deiminase identified by similarity to SP:P16962%3B match to protein family HMM PF02274%3B match to protein family HMM TIGR01078 gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0451 TDE0452 TDE0452 TDE0452 510039 510233 - hypothetical protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0452 TDE0453 TDE0453 TDE0453 510233 510454 - hypothetical protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0453 TDE0454 TDE0454 TDE0454 510503 511333 - hypothetical protein identified by similarity to OMNI:VC1432 gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0454 TDE0455 TDE0455 TDE0455 511332 512537 + GHMP family kinase identified by match to protein family HMM PF00288 gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0455 TDE0456 TDE0456 TDE0456 512626 513474 - pyridoxal biosynthesis lyase PdxS with PdxT forms pyridoxal 5'-phosphate from glutamine%2C either ribose 5-phosphate or ribulose 5-phosphate%2C and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0456 TDE0457 TDE0457 TDE0457 513665 514189 + hypothetical protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0457 TDE0458 TDE0458 TDE0458 514167 514280 + hypothetical protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0458 TDE0459 TDE0459 TDE0459 514522 515301 + hypothetical protein gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0459 TDE0460 TDE0460 TDE0460 515364 516032 - transporter identified by match to protein family HMM PF03471 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0460 TDE0461 TDE0461 TDE0461 516003 516185 + hypothetical protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0461 TDE0462 TDE0462 TDE0462 516268 517077 - metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0462 TDE0463 TDE0463 deoD deoD 517323 518024 + purine nucleoside phosphorylase identified by similarity to SP:O34925%3B match to protein family HMM PF01048%3B match to protein family HMM TIGR00107 gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0463 TDE0464 TDE0464 TDE0464 518038 518265 - NifU family protein identified by match to protein family HMM PF01106 gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0464 TDE0465 TDE0465 TDE0465 518358 518735 - PilT identified by match to protein family HMM PF01850 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0465 TDE0466 TDE0466 TDE0466 518735 518944 - hypothetical protein identified by similarity to OMNI:NTL01NS0147 gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0466 TDE0467 TDE0467 TDE0467 519096 520520 - hypothetical protein gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0467 TDE0468 TDE0468 TDE0468 520590 521363 - hypothetical protein identified by similarity to SP:O83768 gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0468 TDE0469 TDE0469 TDE0469 521360 524077 - hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0469 TDE0470 TDE0470 ftsH ftsH 524641 526617 + cell division protein FtsH identified by similarity to SP:P71408%3B match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM TIGR01241 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0470 TDE0471 TDE0471 TDE0471 526747 528378 - hypothetical protein identified by match to protein family HMM PF02012 gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0471 TDE0472 TDE0472 TDE0472 528516 528734 + hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0472 TDE0473 TDE0473 TDE0473 528761 530860 + heavy metal translocating P-type ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01525 gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0473 TDE0474 TDE0474 TDE0474 530880 531194 + hypothetical protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0474 TDE0475 TDE0475 TDE0475 531243 532298 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0475 TDE0476 TDE0476 TDE0476 532288 533004 - hypothetical protein identified by similarity to OMNI:NTL01FN0715 gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0476 TDE0477 TDE0477 TDE0477 533060 534367 - hypothetical protein identified by similarity to OMNI:NTL02MA1236 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0477 TDE0478 TDE0478 TDE0478 534423 535073 + cyclic nucleotide binding identified by match to protein family HMM PF00027 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0478 TDE0479 TDE0479 TDE0479 535119 536741 - hydroxylamine reductase catalyzes the reduction of hydroxylamine to ammonia and water gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0479 TDE0480 TDE0480 TDE0480 536829 538265 + alpha-L-fucosidase identified by match to protein family HMM PF01120 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0480 TDE0481 TDE0481 TDE0481 538287 538628 - hypothetical protein identified by similarity to OMNI:CC2869 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0481 TDE0482 TDE0482 TDE0482 538638 538856 - hypothetical protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0482 TDE0483 TDE0483 TDE0483 538945 539745 + hypothetical protein identified by similarity to GP:15024627 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0483 TDE0484 TDE0484 TDE0484 539786 541906 - methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0484 TDE0485 TDE0485 TDE0485 542096 542881 - hypothetical protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0485 TDE0486 TDE0486 TDE0486 542902 543702 - hypothetical protein identified by similarity to OMNI:NTL03CP0181 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0486 TDE0487 TDE0487 TDE0487 543718 544503 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0487 TDE0488 TDE0488 TDE0488 544600 545205 + lipoprotein identified by similarity to SP:O51481 gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0488 TDE0489 TDE0489 TDE0489 545246 546145 - hypothetical protein gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0489 TDE0490 TDE0490 TDE0490 546362 546883 - hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0490 TDE0491 TDE0491 TDE0491 546856 547608 + hypothetical protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0491 TDE0492 TDE0492 TDE0492 547608 548717 + sensor histidine kinase/response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0492 TDE0493 TDE0493 TDE0493 548671 549432 - hypothetical protein identified by similarity to OMNI:NTL01FN1312 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0493 TDE0494 TDE0494 TDE0494 549649 550605 - hypothetical protein identified by similarity to OMNI:PG0859 gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0494 TDE0495 TDE0495 TDE0495 550602 550931 - hypothetical protein identified by similarity to SP:P44034 gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0495 TDE0496 TDE0496 TDE0496 551061 551279 - DNA-binding protein identified by similarity to SP:P55565 gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0496 TDE0497 TDE0497 TDE0497 551464 551970 - hypothetical protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0497 TDE0498 TDE0498 TDE0498 552016 552333 - hypothetical protein identified by similarity to OMNI:NTL01PH00866 gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0498 TDE0499 TDE0499 TDE0499 552607 553587 - hypothetical protein identified by similarity to OMNI:NTL01FN0625 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0499 TDE0500 TDE0500 TDE0500 553654 553776 - hypothetical protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0500 TDE0501 TDE0501 TDE0501 554275 555402 - hypothetical protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0501 TDE0502 TDE0502 TDE0502 555584 556648 - ankyrin repeat-containing protein identified by match to protein family HMM PF00023 gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0502 TDE0503 TDE0503 TDE0503 556670 557521 - hypothetical protein identified by similarity to OMNI:NTL01FN0915 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0503 TDE0504 TDE0504 TDE0504 557559 558194 - hypothetical protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0504 TDE0505 TDE0505 TDE0505 558257 558538 - hypothetical protein identified by similarity to OMNI:EF0513%3B match to protein family HMM PF03890 gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0505 TDE0506 TDE0506 TDE0506 558535 558807 - DNA-damage-inducible protein J identified by similarity to SP:Q47150%3B match to protein family HMM PF04221 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0506 TDE0507 TDE0507 TDE0507 558873 559082 - hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0507 TDE0508 TDE0508 TDE0508 559133 559849 - hypothetical protein identified by similarity to GP:15026350 gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0508 TDE0509 TDE0509 TDE0509 559894 560463 - hypothetical protein gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0509 TDE0510 TDE0510 TDE0510 560503 561171 - hypothetical protein gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0510 TDE0511 TDE0511 TDE0511 561200 561322 - hypothetical protein gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0511 TDE0512 TDE0512 TDE0512 561374 561532 - hypothetical protein gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0512 TDE0513 TDE0513 TDE0513 561609 562331 - hypothetical protein identified by similarity to OMNI:NTL01FN0259 gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0513 TDE0514 TDE0514 TDE0514 562510 562833 - hypothetical protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0514 TDE0515 TDE0515 TDE0515 562860 563873 - hypothetical protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0515 TDE0516 TDE0516 TDE0516 563898 564212 - hypothetical protein gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0516 TDE0517 TDE0517 TDE0517 564237 564695 - hypothetical protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0517 TDE0518 TDE0518 TDE0518 564793 565353 - hypothetical protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0518 TDE0519 TDE0519 TDE0519 565528 566079 - hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0519 TDE0520 TDE0520 TDE0520 566164 566751 - hypothetical protein gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0520 TDE0521 TDE0521 TDE0521 566846 568342 - carboxylesterase identified by match to protein family HMM PF00135 gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0521 TDE0522 TDE0522 TDE0522 568639 569304 + hypothetical protein identified by similarity to GP:21110720 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0522 TDE0523 TDE0523 TDE0523 569328 569921 - hypothetical protein identified by similarity to OMNI:NTL01FN1304 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0523 TDE0524 TDE0524 TDE0524 570157 570612 + hypothetical protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0524 TDE0525 TDE0525 TDE0525 570690 571223 + hypothetical protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0525 TDE0526 TDE0526 TDE0526 571581 572390 + hypothetical protein gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0526 TDE0527 TDE0527 TDE0527 572427 573221 + hypothetical protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0527 TDE0528 TDE0528 TDE0528 573346 573939 + hypothetical protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0528 TDE0529 TDE0529 TDE0529 573941 574441 + hypothetical protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0529 TDE0530 TDE0530 TDE0530 574503 574943 + hypothetical protein gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0530 TDE0531 TDE0531 TDE0531 575014 575682 + hypothetical protein gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0531 TDE0532 TDE0532 TDE0532 575710 576012 + TPR gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0532 TDE0533 TDE0533 TDE0533 576050 576637 + hypothetical protein gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0533 TDE0534 TDE0534 TDE0534 576653 577444 + hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0534 TDE0535 TDE0535 TDE0535 577463 578161 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0535 TDE0536 TDE0536 TDE0536 578154 578954 - hypothetical protein gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0536 TDE0537 TDE0537 TDE0537 579164 580138 + hypothetical protein gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0537 TDE0538 TDE0538 TDE0538 580206 581189 + hypothetical protein gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0538 TDE0539 TDE0539 TDE0539 581276 581602 + hypothetical protein identified by similarity to OMNI:NTL01FN1164 gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0539 TDE0540 TDE0540 TDE0540 581604 582407 + hypothetical protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0540 TDE0541 TDE0541 TDE0541 582373 582696 + hypothetical protein gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0541 TDE0542 TDE0542 TDE0542 582720 583202 + acetyltransferase identified by similarity to SP:P39909%3B match to protein family HMM PF00583 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0542 TDE0543 TDE0543 TDE0543 583266 583913 + hypothetical protein gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0543 TDE0544 TDE0544 TDE0544 583994 584926 + hypothetical protein identified by similarity to GP:2429097%3B match to protein family HMM PF03781 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0544 TDE0545 TDE0545 TDE0545 584914 585030 + hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0545 TDE0546 TDE0546 TDE0546 585049 585879 + hypothetical protein gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0546 TDE0547 TDE0547 TDE0547 586061 586972 - hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0547 TDE0548 TDE0548 TDE0548 586972 587085 - hypothetical protein gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0548 TDE0549 TDE0549 TDE0549 587087 587407 - TfoX identified by match to protein family HMM PF04993 gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0549 TDE0550 TDE0550 TDE0550 587460 587813 - hypothetical protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0550 TDE0551 TDE0551 TDE0551 587833 588363 - hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0551 TDE0552 TDE0552 TDE0552 588419 589483 - ankyrin repeat-containing protein identified by match to protein family HMM PF00023 gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0552 TDE0553 TDE0553 TDE0553 589498 590397 - hypothetical protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0553 TDE0554 TDE0554 TDE0554 590429 591058 - hypothetical protein gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0554 TDE0555 TDE0555 TDE0555 591073 591612 - hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0555 TDE0556 TDE0556 TDE0556 591628 592182 - hypothetical protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0556 TDE0557 TDE0557 TDE0557 592236 592763 - hypothetical protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0557 TDE0558 TDE0558 TDE0558 592944 593576 + hypothetical protein gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0558 TDE0559 TDE0559 TDE0559 593599 594186 + hypothetical protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0559 TDE0560 TDE0560 TDE0560 594302 594397 + hypothetical protein gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0560 TDE0561 TDE0561 TDE0561 594385 594783 + hypothetical protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0561 TDE0562 TDE0562 TDE0562 595039 595641 + hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0562 TDE0563 TDE0563 TDE0563 595872 596369 + hypothetical protein identified by similarity to SP:P76483 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0563 TDE0564 TDE0564 TDE0564 596425 597075 + hypothetical protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0564 TDE0565 TDE0565 TDE0565 597171 597290 + hypothetical protein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0565 TDE0566 TDE0566 TDE0566 597325 597996 + hypothetical protein gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0566 TDE0567 TDE0567 TDE0567 597993 598976 + hypothetical protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0567 TDE0568 TDE0568 TDE0568 598989 599288 + hypothetical protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0568 TDE0569 TDE0569 TDE0569 599776 600222 + hypothetical protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0569 TDE0570 TDE0570 TDE0570 600309 601016 + hypothetical protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0570 TDE0571 TDE0571 TDE0571 601275 603557 + hypothetical protein identified by similarity to GP:20906334%3B match to protein family HMM PF03781 gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0571 TDE0572 TDE0572 TDE0572 603634 604794 + hypothetical protein identified by similarity to OMNI:NTL02MA4168%3B match to protein family HMM PF03781 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0572 TDE0573 TDE0573 TDE0573 604821 604970 + hypothetical protein gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0573 TDE0574 TDE0574 TDE0574 605065 605922 + surface protein identified by similarity to OMNI:TP0225%3B match to protein family HMM PF00560 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0574 TDE0575 TDE0575 gatB gatB 606342 607823 - aspartyl/glutamyl-tRNA amidotransferase subunit B allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0575 TDE0576 TDE0576 gatA gatA 607816 609273 - aspartyl/glutamyl-tRNA amidotransferase subunit A allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0576 TDE0577 TDE0577 gatC gatC 609288 609599 - glutamyl-tRNA(Gln) amidotransferase subunit C identified by match to protein family HMM TIGR00135 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0577 TDE0578 TDE0578 TDE0578 609633 609737 + hypothetical protein gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0578 TDE0579 TDE0579 TDE0579 609988 610119 - hypothetical protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0579 TDE0580 TDE0580 TDE0580 615478 616776 + hypothetical protein gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0580 TDE0581 TDE0581 TDE0581 616760 620476 + transglutaminase identified by match to protein family HMM PF00515%3B match to protein family HMM PF01841%3B match to protein family HMM TIGR01612 gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0581 TDE0582 TDE0582 TDE0582 620523 621491 + hypothetical protein identified by similarity to OMNI:NTL01LI0468 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0582 TDE0583 TDE0583 TDE0583 621516 622289 - hypothetical protein identified by similarity to GP:15024546 gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0583 TDE0584 TDE0584 TDE0584 622286 623224 - permease identified by similarity to OMNI:NTL03CP0039%3B match to protein family HMM PF03773 gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0584 TDE0585 TDE0585 TDE0585 623228 625114 - hypothetical protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0585 TDE0586 TDE0586 TDE0586 625386 625700 + hypothetical protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0586 TDE0587 TDE0587 TDE0587 625889 626557 + hypothetical protein identified by similarity to OMNI:NTL01LL0959 gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0587 TDE0588 TDE0588 hutH hutH 626590 628113 + histidine ammonia-lyase identified by similarity to SP:P10944%3B match to protein family HMM PF00221%3B match to protein family HMM TIGR01225 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0588 TDE0589 TDE0589 accA accA 628217 629134 - acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0589 TDE0590 TDE0590 accD accD 629155 629946 - acetyl-CoA carboxylase%2C carboxyl transferase subunit beta identified by match to protein family HMM TIGR00515 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0590 TDE0591 TDE0591 accC accC 630123 631442 - acetyl-CoA carboxylase%2C biotin carboxylase identified by similarity to SP:P24182%3B match to protein family HMM PF00289%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR01369 gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0591 TDE0592 TDE0592 accB accB 631453 632028 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531 gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0592 TDE0593 TDE0593 TDE0593 632131 634026 - internalin-like protein identified by similarity to SP:P25146%3B match to protein family HMM PF00560 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0593 TDE0594 TDE0594 TDE0594 634101 634895 - cysteine protease gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0594 TDE0595 TDE0595 TDE0595 634928 635062 - hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0595 TDE0596 TDE0596 TDE0596 635072 636100 - hypothetical protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0596 TDE0597 TDE0597 TDE0597 636109 637302 - trans-2-enoyl-CoA reductase enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0597 TDE0598 TDE0598 fabG fabG 637448 638191 - 3-oxoacyl-ACP reductase identified by similarity to SP:P25716%3B match to protein family HMM PF00106 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0598 TDE0599 TDE0599 TDE0599 638281 638667 - PilT identified by similarity to OMNI:NTL03ST3407%3B match to protein family HMM PF01850 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0599 TDE0600 TDE0600 TDE0600 638652 638867 - hypothetical protein gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0600 TDE0601 TDE0601 TDE0601 638924 639901 - malonyl CoA-acyl carrier protein transacylase identified by match to protein family HMM PF00698 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0601 TDE0602 TDE0602 fabH fabH 639926 640861 - 3-oxoacyl-ACP synthase identified by similarity to SP:P30790%3B match to protein family HMM TIGR00747 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0602 TDE0603 TDE0603 TDE0603 641028 641945 + hypothetical protein identified by similarity to OMNI:NTL03CP1201 gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0603 TDE0604 TDE0604 TDE0604 641921 642721 - hypothetical protein identified by similarity to GP:2688442 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0604 TDE0605 TDE0605 TDE0605 642721 643305 - hypothetical protein gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0605 TDE0606 TDE0606 TDE0606 643329 644222 - ParB family partitioning protein identified by similarity to SP:P26497%3B match to protein family HMM PF02195%3B match to protein family HMM TIGR00180 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0606 TDE0607 TDE0607 TDE0607 644215 644970 - ParA family ATPase identified by similarity to SP:P37522%3B match to protein family HMM PF00991 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0607 TDE0608 TDE0608 TDE0608 645084 645257 - DNA-binding protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0608 TDE0609 TDE0609 TDE0609 645366 646256 - hypothetical protein identified by similarity to OMNI:EF0617 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0609 TDE0610 TDE0610 TDE0610 646447 647376 - 3-hydroxyacyl-CoA dehydrogenase identified by similarity to SP:P45856%3B match to protein family HMM PF00725%3B match to protein family HMM PF02737 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0610 TDE0611 TDE0611 TDE0611 647369 647479 - hypothetical protein gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0611 TDE0612 TDE0612 TDE0612 647457 647561 - hypothetical protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0612 TDE0613 TDE0613 TDE0613 647664 648056 - hypothetical protein gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0613 TDE0614 TDE0614 cobM cobM 648127 648876 + precorrin-4 C(11)-methyltransferase identified by similarity to SP:P21922%3B match to protein family HMM PF00590%3B match to protein family HMM TIGR01465 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0614 TDE0615 TDE0615 cbiG cbiG 648873 649916 + cobalamin biosynthesis protein CbiG catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0615 TDE0616 TDE0616 TDE0616 649990 650139 + hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0616 TDE0617 TDE0617 TDE0617 650183 650317 - hypothetical protein gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0617 TDE0618 TDE0618 TDE0618 650332 650445 - hypothetical protein gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0618 TDE0619 TDE0619 TDE0619 650458 652548 + methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0619 TDE0620 TDE0620 TDE0620 652618 653433 + hypothetical protein identified by similarity to SP:O83808 gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0620 TDE0621 TDE0621 TDE0621 653454 654836 + MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0621 TDE0622 TDE0622 TDE0622 654873 655808 - radical SAM protein identified by similarity to GP:15025438%3B match to protein family HMM PF04055 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0622 TDE0623 TDE0623 cobJ cobJ 655923 656645 + precorrin-3B C(17)-methyltransferase catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0623 TDE0624 TDE0624 TDE0624 656642 657400 + precorrin-6X reductase identified by similarity to GP:1926452%3B match to protein family HMM PF02571 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0624 TDE0625 TDE0625 TDE0625 657393 658163 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0625 TDE0626 TDE0626 TDE0626 658230 659744 + hypothetical protein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0626 TDE0627 TDE0627 grpE grpE 659985 660728 + co-chaperone protein GrpE identified by match to protein family HMM PF01025 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0627 TDE0628 TDE0628 dnaK dnaK 660749 662689 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0628 TDE0629 TDE0629 dnaJ dnaJ 662727 663908 + chaperone protein DnaJ identified by similarity to SP:P08622%3B match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0629 TDE0630 TDE0630 TDE0630 663980 665431 + sigma factor regulatory protein identified by similarity to SP:P40399 gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0630 TDE0631 TDE0631 TDE0631 665435 667561 + sigma factor regulatory protein identified by similarity to SP:P40399 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0631 TDE0632 TDE0632 TDE0632 667571 667894 + anti-anti-sigma factor identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377 gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0632 TDE0633 TDE0633 TDE0633 667918 668718 + D-alanyl-D-alanine carboxypeptidase identified by similarity to OMNI:TP0221%3B match to protein family HMM PF02557 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0633 TDE0634 TDE0634 TDE0634 668715 669659 - cation efflux identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0634 TDE0635 TDE0635 TDE0635 669757 670638 + hypothetical protein gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0635 TDE0636 TDE0636 TDE0636 670622 671590 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0636 TDE0637 TDE0637 TDE0637 671583 672581 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0637 TDE0638 TDE0638 TDE0638 672578 673540 - oligopeptide/dipeptide ABC transporter permease identified by similarity to SP:P26904%3B match to protein family HMM PF00528 gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0638 TDE0639 TDE0639 TDE0639 673543 674484 - oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0639 TDE0640 TDE0640 TDE0640 674621 676855 - methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0640 TDE0641 TDE0641 murA murA 677092 678372 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0641 TDE0642 TDE0642 TDE0642 678550 679254 - hypothetical protein identified by similarity to OMNI:TP0989 gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0642 TDE0643 TDE0643 pth pth 679306 679917 - peptidyl-tRNA hydrolase Enables the recycling of peptidyl-tRNAs produced at termination of translation gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0643 TDE0644 TDE0644 TDE0644 679929 680666 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0644 TDE0645 TDE0645 TDE0645 680659 681375 - hypothetical protein gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0645 TDE0646 TDE0646 TDE0646 681332 681955 - hypothetical protein identified by similarity to SP:O83763 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0646 TDE0647 TDE0647 cheR cheR 682084 682899 + chemotaxis protein methyltransferase identified by similarity to SP:P31105%3B match to protein family HMM PF01739%3B match to protein family HMM PF03705 gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0647 TDE0648 TDE0648 cheB cheB 682940 684058 + protein-glutamate methylesterase identified by similarity to SP:P04042%3B match to protein family HMM PF00072%3B match to protein family HMM PF01339 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0648 TDE0649 TDE0649 TDE0649 684124 684453 - hypothetical protein gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0649 TDE0650 TDE0650 TDE0650 684837 685871 + hypothetical protein identified by similarity to GP:10175877 gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0650 TDE0651 TDE0651 ppa ppa 685993 688064 - pyrophosphatase%2C proton-translocating%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P31414 gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0651 TDE0652 TDE0652 TDE0652 688317 689051 + hypothetical protein gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0652 TDE0653 TDE0653 TDE0653 689063 689734 + hypothetical protein identified by similarity to OMNI:NTL01OI0952 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0653 TDE0654 TDE0654 TDE0654 689746 690918 + M20/M25/M40 family peptidase identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891 gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0654 TDE0655 TDE0655 TDE0655 691061 691759 + response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486 gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0655 TDE0656 TDE0656 TDE0656 691737 692810 + sensor histidine kinase identified by match to protein family HMM PF02518 gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0656 TDE0657 TDE0657 TDE0657 692905 693666 + ABC transporter ATP-binding protein identified by similarity to GP:18253273%3B match to protein family HMM PF00005 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0657 TDE0658 TDE0658 TDE0658 693694 695739 + ABC transporter permease identified by similarity to GP:18253274%3B match to protein family HMM PF02687 gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0658 TDE0659 TDE0659 TDE0659 695780 696292 - hypothetical protein identified by similarity to OMNI:NTL01FN1824 gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0659 TDE0660 TDE0660 TDE0660 696369 697274 - transcriptional regulator gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0660 TDE0661 TDE0661 TDE0661 697336 697575 - hypothetical protein gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0661 TDE0662 TDE0662 TDE0662 697662 697925 - hypothetical protein identified by similarity to SP:P56605 gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0662 TDE0663 TDE0663 TDE0663 697930 698187 - hypothetical protein identified by similarity to OMNI:SP0275 gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0663 TDE0664 TDE0664 TDE0664 698520 699788 + OmpA protein identified by similarity to SP:P38369%3B match to protein family HMM PF00691 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0664 TDE0665 TDE0665 TDE0665 699882 703442 - pyruvate ferredoxin/flavodoxin oxidoreductase identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR01612 gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0665 TDE0666 TDE0666 sufC sufC 703693 704433 + FeS assembly ATPase SufC identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978 gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0666 TDE0667 TDE0667 sufB sufB 704430 705896 + FeS assembly protein SufB identified by similarity to OMNI:TP0612%3B match to protein family HMM PF01458%3B match to protein family HMM TIGR01980 gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0667 TDE0668 TDE0668 sufD sufD 705899 707026 + FeS assembly protein SufD identified by similarity to OMNI:TP0613%3B match to protein family HMM PF01458 gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0668 TDE0669 TDE0669 TDE0669 707039 707917 - hypothetical protein identified by similarity to GP:21685499%3B match to protein family HMM TIGR01784 gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0669 TDE0670 TDE0670 lon lon 708078 710453 + ATP-dependent protease La identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM TIGR00763 gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0670 TDE0671 TDE0671 TDE0671 710761 711138 + PilT identified by similarity to GP:12802640%3B match to protein family HMM PF01850 gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0671 TDE0672 TDE0672 TDE0672 711250 712071 + hypothetical protein identified by similarity to GP:21111302 gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0672 TDE0673 TDE0673 TDE0673 712130 713173 + hypothetical protein identified by similarity to OMNI:NTL02ML1908%3B match to protein family HMM PF00892 gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0673 TDE0674 TDE0674 TDE0674 713301 714137 + hypothetical protein identified by similarity to OMNI:NTL03SA0302%3B match to protein family HMM PF01661 gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0674 TDE0675 TDE0675 TDE0675 714134 714991 + hypothetical protein identified by similarity to GP:19748326 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0675 TDE0676 TDE0676 TDE0676 715000 715419 + hypothetical protein identified by similarity to OMNI:NTL02SP1476%3B match to protein family HMM PF02082 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0676 TDE0677 TDE0677 TDE0677 715518 716111 + hypothetical protein identified by similarity to OMNI:NTL03CP2236%3B match to protein family HMM PF01206 gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0677 TDE0678 TDE0678 TDE0678 716154 716498 + hypothetical protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0678 TDE0679 TDE0679 TDE0679 716485 717633 + class V aminotransferase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01977 gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0679 TDE0680 TDE0680 secF secF 717703 718944 - preprotein translocase subunit SecF forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0680 TDE0681 TDE0681 secD secD 718946 720709 - preprotein translocase subunit SecD part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0681 TDE0682 TDE0682 yajC yajC 720755 721168 - preprotein translocase subunit YajC identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0682 TDE0683 TDE0683 TDE0683 721277 721393 - hypothetical protein gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0683 TDE0684 TDE0684 TDE0684 721437 721832 + single-strand binding protein%2C truncation%3B this gene contains a premature stop which is not the result of sequencing error%3B identified by similarity to SP:P37455%3B match to protein family HMM PF00436%3B match to protein family HMM TIGR00621 gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0684 TDE0685 TDE0685 TDE0685 721913 722710 - short chain dehydrogenase/reductase family oxidoreductase identified by match to protein family HMM PF00106 gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0685 TDE0686 TDE0686 purC purC 722867 723817 + phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0686 TDE0687 TDE0687 TDE0687 723814 724293 + phosphoribosylaminoimidazole carboxylase catalytic subunit PurE identified by similarity to SP:O28997%3B match to protein family HMM PF00731 gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0687 TDE0688 TDE0688 TDE0688 724312 725817 + hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0688 TDE0689 TDE0689 mtnK mtnK 725830 727032 + methylthioribose kinase phosphorylates methylthioribose to form methylthioribose-1-phosphate%3B involved in methionine salvage pathway gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0689 TDE0690 TDE0690 trmU trmU 727038 728138 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420 gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0690 TDE0691 TDE0691 TDE0691 728202 729788 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0691 TDE0692 TDE0692 TDE0692 729852 729980 + hypothetical protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0692 TDE0693 TDE0693 thiD thiD 730082 730891 + phosphomethylpyrimidine kinase identified by similarity to SP:P39610%3B match to protein family HMM TIGR00097 gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0693 TDE0694 TDE0694 TDE0694 731130 732062 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0694 TDE0695 TDE0695 TDE0695 732062 733117 + hypothetical protein gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0695 TDE0696 TDE0696 TDE0696 733104 734270 + hypothetical protein gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0696 TDE0697 TDE0697 TDE0697 734310 734462 - hypothetical protein gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0697 TDE0698 TDE0698 TDE0698 734712 735125 - PilT identified by match to protein family HMM PF01850 gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0698 TDE0699 TDE0699 TDE0699 735109 735342 - hypothetical protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0699 TDE0700 TDE0700 TDE0700 735421 736488 - hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0700 TDE0701 TDE0701 TDE0701 736609 737337 - hypothetical protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0701 TDE0702 TDE0702 TDE0702 737334 738059 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0702 TDE0703 TDE0703 TDE0703 738056 738280 - AbrB family transcriptional regulator identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439 gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0703 TDE0704 TDE0704 TDE0704 738519 739436 - hypothetical protein identified by match to protein family HMM PF01145 gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0704 TDE0705 TDE0705 TDE0705 739429 740358 - hypothetical protein identified by match to protein family HMM PF01145 gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0705 TDE0706 TDE0706 TDE0706 740560 741672 + adenine-specific DNA modification methyltransferase identified by match to protein family HMM PF02086 gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0706 TDE0707 TDE0707 TDE0707 741685 744000 + hypothetical protein identified by similarity to GP:3323152 gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0707 TDE0708 TDE0708 TDE0708 744040 744555 + nitroreductase identified by match to protein family HMM PF00881 gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0708 TDE0709 TDE0709 msrA msrA 744571 745524 - bifunctional methionine sulfoxide reductase A/B this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus%3B A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress%2C S and R epimers of methionine sulfoxide%2C respectively%3B a fusion gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0709 TDE0710 TDE0710 TDE0710 745572 745727 + hypothetical protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0710 TDE0711 TDE0711 TDE0711 745780 746271 - hypothetical protein identified by similarity to OMNI:NTL03CP1591 gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0711 TDE0712 TDE0712 TDE0712 746271 747053 - hypothetical protein identified by similarity to GP:15025269 gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0712 TDE0713 TDE0713 TDE0713 747249 747776 + NusG family transcription antitermination protein identified by match to protein family HMM PF00467 gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0713 TDE0714 TDE0714 TDE0714 747773 749260 + capsular polysaccharide biosynthesis protein identified by similarity to OMNI:TP0077%3B match to protein family HMM PF02719 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0714 TDE0715 TDE0715 TDE0715 749267 750610 + hypothetical protein gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0715 TDE0716 TDE0716 TDE0716 750968 751804 + CAAX amino terminal protease identified by match to protein family HMM PF02517 gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0716 TDE0717 TDE0717 TDE0717 751919 752440 + hypothetical protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0717 TDE0718 TDE0718 TDE0718 753355 753558 + hypothetical protein gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0718 TDE0719 TDE0719 TDE0719 753602 755755 + bacteriocin ABC transporter ATP-binding/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412%3B match to protein family HMM TIGR01193 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0719 TDE0720 TDE0720 TDE0720 755752 756894 + bacteriocin ABC transporter bacteriocin-binding protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0720 TDE0721 TDE0721 TDE0721 756891 758276 + hypothetical protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0721 TDE0722 TDE0722 TDE0722 758659 759924 + lipoprotein gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0722 TDE0723 TDE0723 TDE0723 760444 761721 + hypothetical protein identified by similarity to GP:20517356 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0723 TDE0724 TDE0724 TDE0724 761993 763297 + hypothetical protein identified by similarity to OMNI:NTL01TT0373 gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0724 TDE0725 TDE0725 TDE0725 763605 764780 + exopolysaccharide biosynthesis protein identified by similarity to GP:10442661%3B match to protein family HMM PF01041 gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0725 TDE0726 TDE0726 TDE0726 764784 766871 + aldehyde oxidase and xanthine dehydrogenase identified by match to protein family HMM PF01315%3B match to protein family HMM PF02738 gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0726 TDE0727 TDE0727 TDE0727 766861 767340 + iron-sulfur cluster-binding protein identified by match to protein family HMM PF00111 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0727 TDE0728 TDE0728 TDE0728 767346 768191 + FAD-binding protein identified by match to protein family HMM PF00941 gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0728 TDE0729 TDE0729 TDE0729 768198 769214 - hypothetical protein identified by similarity to GP:3322883 gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0729 TDE0730 TDE0730 TDE0730 769286 770677 - hypothetical protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0730 TDE0731 TDE0731 TDE0731 770781 771437 - hypothetical protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0731 TDE0732 TDE0732 TDE0732 771498 772820 - hypothetical protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0732 TDE0733 TDE0733 TDE0733 772840 774186 - hypothetical protein gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0733 TDE0734 TDE0734 TDE0734 774190 774769 - conserved hypothetical protein%2C degenerate%3B this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error%3B identified by similarity to GP:21685499 gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0734 TDE0735 TDE0735 TDE0735 774836 775093 - hypothetical protein identified by similarity to GP:9945801%3B match to protein family HMM PF01919 gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0735 TDE0736 TDE0736 TDE0736 775090 775320 - hypothetical protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0736 TDE0737 TDE0737 TDE0737 775498 775764 - hypothetical protein identified by similarity to SP:P56605 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0737 TDE0738 TDE0738 TDE0738 775764 776024 - hypothetical protein identified by similarity to OMNI:NTL01FN1349 gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0738 TDE0739 TDE0739 TDE0739 775930 776088 + hypothetical protein gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0739 TDE0740 TDE0740 TDE0740 776127 776264 + hypothetical protein gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0740 TDE0741 TDE0741 TDE0741 776275 778248 - hypothetical protein gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0741 TDE0742 TDE0742 TDE0742 778540 778725 - hypothetical protein gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0742 TDE0743 TDE0743 trxB trxB 778858 779811 + thioredoxin reductase identified by match to protein family HMM PF00070%3B match to protein family HMM TIGR01292 gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0743 TDE0744 TDE0744 trxA trxA 779984 780301 + thioredoxin identified by similarity to SP:P21610%3B match to protein family HMM PF00085 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0744 TDE0745 TDE0745 grdA grdA 780427 780900 + glycine/sarcosine/betaine reductase complex protein A GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester%3B oxidized GrdA is then reduced by thioredoxin gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0745 TDE0746 TDE0746 TDE0746 781021 782199 - iron compound ABC transporter ATP-binding protein identified by similarity to SP:Q47087%3B match to protein family HMM PF00005 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0746 TDE0747 TDE0747 TDE0747 782186 783217 - iron compound ABC transporter permease identified by match to protein family HMM PF01032 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0747 TDE0748 TDE0748 TDE0748 783221 784378 - iron compound ABC transporter periplasmic iron compound-binding protein identified by similarity to SP:Q58288%3B match to protein family HMM PF01497 gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0748 TDE0749 TDE0749 TDE0749 784563 788297 - cobalamin biosynthesis protein CobN identified by similarity to SP:P29929%3B match to protein family HMM PF02514%3B match to protein family HMM TIGR01612 gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0749 TDE0750 TDE0750 TDE0750 788294 790225 - magnesium chelatase subunit D/I identified by match to protein family HMM PF00092%3B match to protein family HMM PF01078 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0750 TDE0751 TDE0751 TDE0751 790212 791141 - magnesium chelatase subunit D/I identified by match to protein family HMM PF01078 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0751 TDE0752 TDE0752 TDE0752 791493 793322 + hypothetical protein identified by similarity to SP:Q9R9I1 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0752 TDE0753 TDE0753 TDE0753 793340 793978 + hypothetical protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0753 TDE0754 TDE0754 TDE0754 793962 794567 + hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0754 TDE0755 TDE0755 TDE0755 794623 796098 - Na+/H+ antiporter gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0755 TDE0756 TDE0756 TDE0756 796188 796949 - iron compound ABC transporter ATP-binding protein identified by similarity to SP:P15031%3B match to protein family HMM PF00005 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0756 TDE0757 TDE0757 TDE0757 796949 798016 - iron compound ABC transporter permease identified by match to protein family HMM PF01032 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0757 TDE0758 TDE0758 TDE0758 798018 799013 - iron compound ABC transporter periplasmic iron compound-binding protein identified by match to protein family HMM PF01497 gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0758 TDE0759 TDE0759 TDE0759 799218 799589 - hypothetical protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0759 TDE0760 TDE0760 TDE0760 799576 800073 + hypothetical protein identified by similarity to OMNI:DR1623 gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0760 TDE0761 TDE0761 prcA prcA 800109 802028 + protease complex-associated polypeptide identified by similarity to GP:20152187 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0761 TDE0762 TDE0762 prtP prtP 802042 804209 + serine protease%2C dentilisin%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to GP:1752641%3B match to protein family HMM PF00082 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0762 TDE0763 TDE0763 TDE0763 804324 804428 - hypothetical protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0763 TDE0764 TDE0764 TDE0764 804468 804617 - hypothetical protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0764 TDE0765 TDE0765 tuf tuf 804872 806059 + elongation factor Tu EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0765 TDE0766 TDE0766 rpsJ rpsJ 806124 806432 + 30S ribosomal protein S10 NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0766 TDE0767 TDE0767 rplC rplC 806495 807121 + 50S ribosomal protein L3 binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0767 TDE0768 TDE0768 rplD rplD 807136 807771 + 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0768 TDE0769 TDE0769 rplW rplW 807774 808058 + 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0769 TDE0770 TDE0770 rplB rplB 808092 808922 + 50S ribosomal protein L2 one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0770 TDE0771 TDE0771 rpsS rpsS 808935 809213 + 30S ribosomal protein S19 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0771 TDE0772 TDE0772 rplV rplV 809224 809580 + 50S ribosomal protein L22 binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0772 TDE0773 TDE0773 rpsC rpsC 809583 810302 + 30S ribosomal protein S3 forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0773 TDE0774 TDE0774 rplP rplP 810305 810724 + 50S ribosomal protein L16 located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0774 TDE0775 TDE0775 rpmC rpmC 810737 810946 + 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0775 TDE0776 TDE0776 rpsQ rpsQ 810958 811230 + 30S ribosomal protein S17 primary binding protein%3B helps mediate assembly%3B involved in translation fidelity gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0776 TDE0777 TDE0777 rplN rplN 811249 811617 + 50S ribosomal protein L14 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0777 TDE0778 TDE0778 rplX rplX 811627 811941 + 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0778 TDE0779 TDE0779 rplE rplE 811941 812492 + 50S ribosomal protein L5 part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13 gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0779 TDE0780 TDE0780 rpsN rpsN 812504 812689 + 30S ribosomal protein S14 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group appear to contain the zinc-binding motif gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0780 TDE0781 TDE0781 rpsH rpsH 812701 813099 + 30S ribosomal protein S8 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0781 TDE0782 TDE0782 rplF rplF 813110 813649 + 50S ribosomal protein L6 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0782 TDE0783 TDE0783 rplR rplR 813660 814022 + 50S ribosomal protein L18 binds 5S rRNA along with protein L5 and L25 gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0783 TDE0784 TDE0784 rpsE rpsE 814031 814552 + 30S ribosomal protein S5 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0784 TDE0785 TDE0785 rpmD rpmD 814557 814742 + 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0785 TDE0786 TDE0786 rplO rplO 814742 815194 + 50S ribosomal protein L15 late assembly protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0786 TDE0787 TDE0787 secY secY 815208 816524 + preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0787 TDE0788 TDE0788 rpmJ rpmJ 816572 816685 + 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0788 TDE0789 TDE0789 rpsM rpsM 816702 817067 + 30S ribosomal protein S13 located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0789 TDE0790 TDE0790 rpsK rpsK 817091 817471 + 30S ribosomal protein S11 located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0790 TDE0791 TDE0791 rpoA rpoA 817482 818537 + DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0791 TDE0792 TDE0792 rplQ rplQ 818527 819066 + 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0792 TDE0793 TDE0793 TDE0793 819050 819265 + hypothetical protein identified by similarity to SP:O83244 gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0793 TDE0794 TDE0794 TDE0794 819314 819676 - hypothetical protein identified by similarity to OMNI:SAG0889 gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0794 TDE0795 TDE0795 TDE0795 819678 820064 - hypothetical protein identified by similarity to GP:23095338 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0795 TDE0796 TDE0796 TDE0796 820197 821006 + histidinol phosphate phosphatase HisJ identified by match to protein family HMM PF02231 gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0796 TDE0797 TDE0797 TDE0797 820999 821283 + acylphosphatase identified by match to protein family HMM PF00708 gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0797 TDE0798 TDE0798 TDE0798 821319 822647 - transporter gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0798 TDE0799 TDE0799 TDE0799 822749 823528 + glycerophosphoryl diester phosphodiesterase identified by similarity to SP:P10908%3B match to protein family HMM PF03009 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0799 TDE0800 TDE0800 TDE0800 823544 823978 - acetyltransferase identified by match to protein family HMM PF00583 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0800 TDE0801 TDE0801 TDE0801 824015 824449 - hypothetical protein identified by similarity to OMNI:NTL02SP1476%3B match to protein family HMM PF02082 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0801 TDE0802 TDE0802 TDE0802 824562 825197 - hypothetical protein identified by similarity to OMNI:SP1627 gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0802 TDE0803 TDE0803 TDE0803 825457 826935 + hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0803 TDE0804 TDE0804 TDE0804 826962 828089 - hypothetical protein identified by similarity to GP:6002200%3B match to protein family HMM PF01139 gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0804 TDE0805 TDE0805 TDE0805 828311 828433 + hypothetical protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0805 TDE0806 TDE0806 TDE0806 828430 828978 - hypothetical protein identified by similarity to GP:18143795 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0806 TDE0807 TDE0807 TDE0807 829013 829198 - hypothetical protein gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0807 TDE0808 TDE0808 TDE0808 829270 829740 - acetyltransferase identified by match to protein family HMM PF00583 gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0808 TDE0809 TDE0809 TDE0809 829730 830875 - hypothetical protein gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0809 TDE0810 TDE0810 TDE0810 830902 831069 - hypothetical protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0810 TDE0811 TDE0811 TDE0811 831071 832438 - efflux protein identified by match to protein family HMM PF01554 gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0811 TDE0812 TDE0812 TDE0812 832584 834197 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0812 TDE0813 TDE0813 TDE0813 834181 835767 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0813 TDE0814 TDE0814 TDE0814 835799 835969 - transcriptional regulator gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0814 TDE0815 TDE0815 TDE0815 836067 837455 - hypothetical protein identified by match to protein family HMM PF03606 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0815 TDE0816 TDE0816 TDE0816 837461 838654 - M20/M25/M40 family peptidase identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891 gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0816 TDE0817 TDE0817 TDE0817 838940 840019 + histidine kinase-related ATPase identified by match to protein family HMM PF02518 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0817 TDE0818 TDE0818 TDE0818 840016 841737 - ABC transporter ATP-binding protein/permease identified by similarity to GP:15418958%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0818 TDE0819 TDE0819 TDE0819 841739 843475 - ABC transporter ATP-binding protein/permease identified by similarity to SP:P27299%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0819 TDE0820 TDE0820 TDE0820 843804 844463 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0820 TDE0821 TDE0821 TDE0821 844518 844610 + hypothetical protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0821 TDE0822 TDE0822 TDE0822 844607 844729 + hypothetical protein gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0822 TDE0823 TDE0823 TDE0823 844881 845312 + (3R)-hydroxymyristoyl-ACP dehydratase identified by similarity to SP:P21774%3B match to protein family HMM PF03061 gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0823 TDE0824 TDE0824 TDE0824 845316 845966 - lipoprotein identified by similarity to OMNI:NTL01NS1876 gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0824 TDE0825 TDE0825 TDE0825 846102 847700 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01085 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0825 TDE0826 TDE0826 TDE0826 847744 847920 + hypothetical protein identified by similarity to OMNI:NTL02MA3231 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0826 TDE0827 TDE0827 TDE0827 847967 848143 - hypothetical protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0827 TDE0828 TDE0828 gidA gidA 848373 850259 - tRNA uridine 5-carboxymethylaminomethyl modification protein GidA GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0828 TDE0829 TDE0829 TDE0829 850275 851567 - aminopeptidase 2 catalyzes the removal of amino acids from the N termini of peptides gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0829 TDE0830 TDE0830 TDE0830 851699 852115 - hypothetical protein gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0830 TDE0831 TDE0831 TDE0831 852185 852385 - hypothetical protein gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0831 TDE0832 TDE0832 TDE0832 852689 853135 + hypothetical protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0832 TDE0833 TDE0833 TDE0833 853132 854157 + lipoprotein identified by match to protein family HMM PF03781 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0833 TDE0834 TDE0834 nqrE nqrE 854381 854953 - Na(+)-translocating NADH-quinone reductase%2C E subunit identified by similarity to SP:Q56589 gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0834 TDE0835 TDE0835 nqrD nqrD 854957 855616 - electron transport complex protein RsxE in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents%3B similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0835 TDE0836 TDE0836 nqrC nqrC 855617 856186 - Na(+)-translocating NADH-quinone reductase subunit C identified by similarity to SP:P97054 gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0836 TDE0837 TDE0837 nqrB nqrB 856183 857199 - Na(+)-translocating NADH-quinone reductase subunit B identified by similarity to GP:2558474%3B match to protein family HMM PF03116%3B match to protein family HMM TIGR01946 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0837 TDE0838 TDE0838 nqrA nqrA 857199 858641 - Na(+)-translocating NADH-quinone reductase%2C A subunit identified by similarity to SP:Q52716%3B match to protein family HMM PF00037%3B match to protein family HMM PF01512%3B match to protein family HMM TIGR01945 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0838 TDE0839 TDE0839 TDE0839 858724 859431 - rhodanese-like protein identified by match to protein family HMM PF00581 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0839 TDE0840 TDE0840 TDE0840 859509 860984 - hypothetical protein gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0840 TDE0841 TDE0841 TDE0841 861026 861688 - hypothetical protein identified by similarity to SP:O83731 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0841 TDE0842 TDE0842 cfpA cfpA 861855 863903 + filament protein A identified by similarity to SP:Q56336 gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0842 TDE0843 TDE0843 TDE0843 863990 865015 + hypothetical protein identified by similarity to SP:O83729 gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0843 TDE0844 TDE0844 TDE0844 865026 867833 + pyruvate phosphate dikinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0844 TDE0845 TDE0845 TDE0845 867935 868609 + hypothetical protein identified by similarity to OMNI:CC1115%3B match to protein family HMM PF01987%3B match to protein family HMM TIGR00266 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0845 TDE0846 TDE0846 TDE0846 868763 870925 + hypothetical protein identified by similarity to SP:O83823 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0846 TDE0847 TDE0847 TDE0847 871034 871402 + hypothetical protein identified by similarity to GP:5457913%3B match to protein family HMM PF03692 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0847 TDE0848 TDE0848 TDE0848 871409 871618 + hypothetical protein gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0848 TDE0849 TDE0849 TDE0849 871739 872389 + hypothetical protein identified by similarity to GP:21322997%3B match to protein family HMM PF02592%3B match to protein family HMM TIGR00697 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0849 TDE0850 TDE0850 TDE0850 872470 874635 - methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0850 TDE0851 TDE0851 TDE0851 874839 875087 - hypothetical protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0851 TDE0852 TDE0852 rplM rplM 875159 875587 + 50S ribosomal protein L13 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0852 TDE0853 TDE0853 rpsI rpsI 875613 875987 + 30S ribosomal protein S9 forms a direct contact with the tRNA during translation gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0853 TDE0854 TDE0854 recX recX 875953 876621 + recombination regulator RecX binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0854 TDE0855 TDE0855 TDE0855 876676 877245 + DNA-binding response regulator identified by match to protein family HMM PF00072 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0855 TDE0856 TDE0856 TDE0856 877251 878438 + L-fuculose phosphate aldolase identified by match to protein family HMM PF00596 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0856 TDE0857 TDE0857 TDE0857 878453 879658 + lipoprotein identified by similarity to GP:3322944 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0857 TDE0858 TDE0858 TDE0858 879658 880230 + hypothetical protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0858 TDE0859 TDE0859 TDE0859 880240 881166 + hypothetical protein identified by similarity to GP:3322569 gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0859 TDE0860 TDE0860 rsuA rsuA 881163 881900 + ribosomal small subunit pseudouridine synthase A identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0860 TDE0861 TDE0861 tyrS tyrS 881968 883188 - tyrosyl-tRNA synthetase identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0861 TDE0862 TDE0862 TDE0862 883332 884186 + hypothetical protein identified by similarity to GP:21685499%3B match to protein family HMM TIGR01784 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0862 TDE0863 TDE0863 TDE0863 884666 885349 + magnesium transport family protein MgtC identified by match to protein family HMM PF02308 gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0863 TDE0864 TDE0864 TDE0864 885384 887237 + phosphohexose mutase identified by match to protein family HMM PF02878 gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0864 TDE0865 TDE0865 TDE0865 887267 887659 + hypothetical protein identified by similarity to OMNI:TP0412 gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0865 TDE0866 TDE0866 TDE0866 887754 888689 + hypothetical protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0866 TDE0867 TDE0867 TDE0867 888682 890460 + hypothetical protein gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0867 TDE0868 TDE0868 TDE0868 890525 891532 + FAD/FMN-binding oxidoreductase identified by match to protein family HMM PF00724 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0868 TDE0869 TDE0869 TDE0869 891610 892722 + hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0869 TDE0870 TDE0870 TDE0870 892838 894736 + phosphatase/nucleotidase identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0870 TDE0871 TDE0871 TDE0871 894747 894887 - hypothetical protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0871 TDE0872 TDE0872 recA recA 894981 896225 + recombinase A catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0872 TDE0873 TDE0873 TDE0873 896283 897059 + hypothetical protein identified by similarity to SP:P35154%3B match to protein family HMM PF02616 gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0873 TDE0874 TDE0874 TDE0874 897079 897594 + transcriptional regulator identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281 gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0874 TDE0875 TDE0875 rluB rluB 897629 898333 + ribosomal large subunit pseudouridine synthase B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0875 TDE0876 TDE0876 TDE0876 898429 898614 - hypothetical protein identified by similarity to SP:O28646 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0876 TDE0877 TDE0877 TDE0877 898729 899679 + hypothetical protein identified by similarity to OMNI:NTL03PA01681 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0877 TDE0878 TDE0878 TDE0878 899792 899989 + hypothetical protein identified by similarity to GP:17132224 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0878 TDE0879 TDE0879 TDE0879 899986 900117 + hypothetical protein gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0879 TDE0880 TDE0880 cobT cobT 900114 901196 + nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase identified by similarity to SP:P36562%3B match to protein family HMM PF02277 gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0880 TDE0881 TDE0881 rpsP rpsP 901307 901552 + 30S ribosomal protein S16 identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0881 TDE0882 TDE0882 TDE0882 901589 901822 + hypothetical protein identified by similarity to SP:O83876 gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0882 TDE0883 TDE0883 rimM rimM 901825 902364 + 16S rRNA processing protein RimM identified by match to protein family HMM PF01782 gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0883 TDE0884 TDE0884 trmD trmD 902361 903092 + tRNA (guanine-N(1)-)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0884 TDE0885 TDE0885 rplS rplS 903085 903444 + 50S ribosomal protein L19 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0885 TDE0886 TDE0886 TDE0886 903481 904434 + hypothetical protein identified by similarity to SP:O83880 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0886 TDE0887 TDE0887 TDE0887 904423 904842 - PilT identified by similarity to OMNI:NTL01TT0993%3B match to protein family HMM PF01850 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0887 TDE0888 TDE0888 TDE0888 904823 905065 - hypothetical protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0888 TDE0889 TDE0889 TDE0889 905230 905874 + hypothetical protein gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0889 TDE0890 TDE0890 TDE0890 906030 907664 + hypothetical protein identified by similarity to SP:O83771 gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0890 TDE0891 TDE0891 TDE0891 907732 908652 + transcriptional regulator gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0891 TDE0892 TDE0892 TDE0892 908711 909499 + ABC transporter permease gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0892 TDE0893 TDE0893 TDE0893 909480 910511 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0893 TDE0894 TDE0894 TDE0894 910508 911299 + hypothetical protein identified by similarity to GP:19714438 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0894 TDE0895 TDE0895 TDE0895 911317 912264 - AraC family transcriptional regulator identified by match to protein family HMM PF00165 gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0895 TDE0896 TDE0896 TDE0896 912466 914253 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0896 TDE0897 TDE0897 TDE0897 914253 915998 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0897 TDE0898 TDE0898 TDE0898 916018 916617 + hypothetical protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0898 TDE0899 TDE0899 TDE0899 916621 917337 + ABC transporter permease gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0899 TDE0900 TDE0900 TDE0900 917328 918752 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0900 TDE0901 TDE0901 TDE0901 918949 919404 - hypothetical protein identified by similarity to OMNI:NTL02SP0553 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0901 TDE0902 TDE0902 TDE0902 919470 920222 - hypothetical protein identified by similarity to OMNI:PG0421 gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0902 TDE0903 TDE0903 pcrA pcrA 920368 922356 + ATP-dependent DNA helicase PcrA identified by similarity to SP:P56255%3B match to protein family HMM PF00580 gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0903 TDE0904 TDE0904 TDE0904 922368 922496 - hypothetical protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0904 TDE0905 TDE0905 TDE0905 922572 923288 + hypothetical protein gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0905 TDE0906 TDE0906 TDE0906 923304 924779 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0906 TDE0907 TDE0907 TDE0907 924784 925380 + hypothetical protein identified by similarity to OMNI:EF0582 gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0907 TDE0908 TDE0908 TDE0908 925394 927145 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0908 TDE0909 TDE0909 tdeIIIM tdeIIIM 927306 928913 + type II DNA modification methyltransferase M.TdeIII identified by similarity to SP:Q58843 gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0909 TDE0910 TDE0910 TDE0910 928914 930626 + hypothetical protein gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0910 TDE0911 TDE0911 tdeIIIR tdeIIIR 930613 931389 + type II restriction endonuclease TdeIII identified by similarity to SP:Q58844 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0911 TDE0912 TDE0912 TDE0912 931490 931588 + hypothetical protein gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0912 TDE0913 TDE0913 TDE0913 931786 933144 - hypothetical protein gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0913 TDE0914 TDE0914 TDE0914 933160 933285 - hypothetical protein gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0914 TDE0915 TDE0915 TDE0915 933237 933410 - hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0915 TDE0916 TDE0916 TDE0916 933499 935244 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0916 TDE0917 TDE0917 TDE0917 935313 935417 - hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0917 TDE0918 TDE0918 TDE0918 935417 939043 + hypothetical protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0918 TDE0919 TDE0919 TDE0919 939087 939185 + hypothetical protein gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0919 TDE0920 TDE0920 TDE0920 939190 940131 - AraC family transcriptional regulator identified by match to protein family HMM PF00165 gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0920 TDE0921 TDE0921 TDE0921 940208 941947 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0921 TDE0922 TDE0922 TDE0922 941937 943730 - ABC transporter ATP-binding protein/permease identified by similarity to SP:P77265%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0922 TDE0923 TDE0923 TDE0923 944010 945821 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0923 TDE0924 TDE0924 TDE0924 945841 947724 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0924 TDE0925 TDE0925 pepT pepT 947987 949192 + peptidase T catalyzes the release of the N-terminal amino acid from a tripeptide gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0925 TDE0926 TDE0926 TDE0926 949282 950097 - phosphonate ABC transporter permease identified by similarity to SP:P16683%3B match to protein family HMM PF00528 gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0926 TDE0927 TDE0927 TDE0927 950094 950963 - phosphonate ABC transporter permease identified by match to protein family HMM PF00528 gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0927 TDE0928 TDE0928 TDE0928 950960 951730 - phosphonate ABC transporter ATP-binding protein identified by similarity to SP:P16677%3B match to protein family HMM PF00005 gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0928 TDE0929 TDE0929 argF argF 951809 952825 - ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0929 TDE0930 TDE0930 TDE0930 952933 953778 - hypothetical protein identified by similarity to GP:15023357%3B match to protein family HMM PF02588 gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0930 TDE0931 TDE0931 TDE0931 953851 955197 - MATE family transporter identified by similarity to OMNI:NTL01LM0003%3B match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0931 TDE0932 TDE0932 TDE0932 955224 958034 - adenylate/guanylate cyclase catalytic identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226%3B match to protein family HMM TIGR01612 gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0932 TDE0933 TDE0933 ackA ackA 958203 959396 + acetate kinase identified by similarity to SP:P37877%3B match to protein family HMM PF00871%3B match to protein family HMM TIGR00016 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0933 TDE0934 TDE0934 groES groES 959485 959751 - co-chaperonin GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0934 TDE0935 TDE0935 TDE0935 959751 959843 - hypothetical protein gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0935 TDE0936 TDE0936 TDE0936 959962 960069 - hypothetical protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0936 TDE0937 TDE0937 TDE0937 960091 960951 + RNA polymerase sigma-70 factor identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0937 TDE0938 TDE0938 TDE0938 961053 962264 - hypothetical protein identified by similarity to OMNI:NTL02SP0333%3B match to protein family HMM PF01170 gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0938 TDE0939 TDE0939 TDE0939 962339 963274 + lipoprotein identified by similarity to SP:O83681 gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0939 TDE0940 TDE0940 TDE0940 963276 963695 + hypothetical protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0940 TDE0941 TDE0941 TDE0941 963713 964192 - NLP/P60 identified by similarity to SP:P23898%3B match to protein family HMM PF00877 gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0941 TDE0942 TDE0942 TDE0942 964272 965999 + long-chain-fatty-acid--CoA ligase identified by similarity to SP:P94547%3B match to protein family HMM PF00501 gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0942 TDE0943 TDE0943 TDE0943 966123 966332 + hypothetical protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0943 TDE0944 TDE0944 TDE0944 966387 967097 + hypothetical protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0944 TDE0945 TDE0945 TDE0945 967268 968380 + hypothetical protein identified by similarity to GP:2429097%3B match to protein family HMM PF03781 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0945 TDE0946 TDE0946 TDE0946 968352 968795 + hypothetical protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0946 TDE0947 TDE0947 TDE0947 968804 970882 - translation elongation factor G identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0947 TDE0948 TDE0948 TDE0948 971049 971927 - hypothetical protein identified by similarity to GP:20517591 gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0948 TDE0949 TDE0949 eno eno 972150 973451 + phosphopyruvate hydratase enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0949 TDE0950 TDE0950 TDE0950 974256 974402 - hypothetical protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0950 TDE0951 TDE0951 TDE0951 974392 975438 + lipoprotein identified by similarity to SP:Q56328%3B match to protein family HMM PF02608 gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0951 TDE0952 TDE0952 TDE0952 975462 977006 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0952 TDE0953 TDE0953 TDE0953 977003 978067 + branched-chain amino acid ABC transporter permease identified by match to protein family HMM PF02653 gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0953 TDE0954 TDE0954 TDE0954 978064 978900 + branched-chain amino acid ABC transporter permease identified by match to protein family HMM PF02653 gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0954 TDE0955 TDE0955 TDE0955 978982 979590 + LemA identified by similarity to OMNI:TP0571%3B match to protein family HMM PF04011 gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0955 TDE0956 TDE0956 TDE0956 979596 980390 + hypothetical protein identified by similarity to OMNI:BR1821%3B match to protein family HMM PF04536 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0956 TDE0957 TDE0957 TDE0957 980392 981135 + glycerophosphoryl diester phosphodiesterase identified by match to protein family HMM PF03009 gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0957 TDE0958 TDE0958 TDE0958 981180 982091 + patatin identified by match to protein family HMM PF01734 gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0958 TDE0959 TDE0959 TDE0959 982075 982425 + hypothetical protein identified by similarity to SP:O83995 gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0959 TDE0960 TDE0960 TDE0960 982516 983655 + neuB identified by match to protein family HMM PF01354%3B match to protein family HMM PF03102 gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0960 TDE0961 TDE0961 TDE0961 983659 984072 + DnaJ protein identified by match to protein family HMM PF00226 gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0961 TDE0962 TDE0962 TDE0962 984123 986033 + hypothetical protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0962 TDE0963 TDE0963 dinB dinB 986035 987222 + DNA polymerase IV identified by match to protein family HMM PF00817 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0963 TDE0964 TDE0964 TDE0964 987219 990638 + hypothetical protein gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0964 TDE0965 TDE0965 TDE0965 990660 991457 - hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0965 TDE0966 TDE0966 TDE0966 991490 992311 - TatD family hydrolase identified by match to protein family HMM PF01026 gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0966 TDE0967 TDE0967 TDE0967 992341 992589 + hypothetical protein identified by similarity to SP:O83897 gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0967 TDE0968 TDE0968 efp efp 992653 993216 - translation elongation factor P identified by match to protein family HMM PF01132%3B match to protein family HMM TIGR00038 gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0968 TDE0969 TDE0969 TDE0969 993400 994635 + hypothetical protein identified by similarity to OMNI:NTL01TT1087 gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0969 TDE0970 TDE0970 TDE0970 994909 995244 + hypothetical protein gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0970 TDE0971 TDE0971 argS argS 995319 997091 + arginyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0971 TDE0972 TDE0972 TDE0972 997167 998021 + ComF-like protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0972 TDE0973 TDE0973 radC radC 998030 998707 - DNA repair protein RadC identified by similarity to SP:P25531%3B match to protein family HMM PF04002%3B match to protein family HMM TIGR00608 gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0973 TDE0974 TDE0974 TDE0974 998834 998935 + hypothetical protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0974 TDE0975 TDE0975 TDE0975 999061 999939 + hypothetical protein gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0975 TDE0976 TDE0976 TDE0976 1000166 1000558 + hypothetical protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0976 TDE0977 TDE0977 TDE0977 1000555 1001700 + hypothetical protein identified by match to protein family HMM PF03781 gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0977 TDE0978 TDE0978 TDE0978 1002008 1002484 + hypothetical protein identified by similarity to GP:3005673 gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0978 TDE0979 TDE0979 TDE0979 1002600 1004036 - penicillin binding protein identified by match to protein family HMM PF00768 gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0979 TDE0980 TDE0980 asnC asnC 1004069 1005490 - asparaginyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0980 TDE0981 TDE0981 TDE0981 1005636 1006595 + hypothetical protein identified by similarity to OMNI:BB0418 gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0981 TDE0982 TDE0982 TDE0982 1006617 1008392 + dihydroorotate dehydrogenase/oxidoreductase%2C FAD-binding identified by match to protein family HMM PF00970%3B match to protein family HMM PF01180%3B match to protein family HMM TIGR01037 gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0982 TDE0983 TDE0983 TDE0983 1008576 1009599 + oligopeptide/dipeptide ABC transporter permease protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P33914 gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0983 TDE0984 TDE0984 TDE0984 1009614 1011113 + oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0984 TDE0985 TDE0985 TDE0985 1011177 1013114 + oligopeptide/dipeptide ABC transporter periplasmic peptide-binding protein identified by match to protein family HMM PF00496 gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0985 TDE0986 TDE0986 TDE0986 1013201 1014181 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0986 TDE0987 TDE0987 TDE0987 1014181 1015137 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0987 TDE0988 TDE0988 TDE0988 1015222 1017165 + oligopeptide/dipeptide ABC transporter peptide-binding protein identified by match to protein family HMM PF00496 gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0988 TDE0989 TDE0989 TDE0989 1017272 1017508 + hypothetical protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0989 TDE0990 TDE0990 TDE0990 1017538 1017888 + hypothetical protein identified by similarity to OMNI:CC2869%3B match to protein family HMM PF03681 gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0990 TDE0991 TDE0991 rpmB rpmB 1017964 1018155 - 50S ribosomal protein L28 identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009 gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0991 TDE0992 TDE0992 TDE0992 1018411 1019100 - 5-formyltetrahydrofolate cyclo-ligase identified by match to protein family HMM PF01812 gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0992 TDE0993 TDE0993 TDE0993 1019072 1020505 - lipoprotein identified by similarity to OMNI:TP0954%3B match to protein family HMM PF00515 gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0993 TDE0994 TDE0994 TDE0994 1020678 1022507 + hypothetical protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0994 TDE0995 TDE0995 TDE0995 1022532 1022666 - hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0995 TDE0996 TDE0996 TDE0996 1022625 1024058 + hypothetical protein identified by similarity to SP:P94250 gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0996 TDE0997 TDE0997 gdhA gdhA 1024132 1025373 - glutamate dehydrogenase identified by similarity to SP:O74024%3B match to protein family HMM PF00208%3B match to protein family HMM PF02812 gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0997 TDE0998 TDE0998 TDE0998 1025342 1025554 + hypothetical protein gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0998 TDE0999 TDE0999 TDE0999 1026010 1026846 + formate/nitrite transporter identified by match to protein family HMM PF01226%3B match to protein family HMM TIGR00790 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=TDE0999 TDE1000 TDE1000 TDE1000 1026903 1027781 + 3-hydroxyacid dehydrogenase identified by match to protein family HMM PF03446 gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1000 TDE1001 TDE1001 pyrE pyrE 1027793 1028497 + orotate phosphoribosyltransferase identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1001 TDE1002 TDE1002 TDE1002 1028535 1029227 - hypothetical protein gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1002 TDE1003 TDE1003 TDE1003 1029251 1029385 + hypothetical protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1003 TDE1004 TDE1004 TDE1004 1029366 1030226 - flagellar filament core protein identified by similarity to SP:P21990%3B match to protein family HMM PF00669%3B match to protein family HMM PF00700 gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1004 TDE1005 TDE1005 TDE1005 1030346 1030555 + hypothetical protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1005 TDE1006 TDE1006 flgG-1 flgG-1 1030567 1031379 + flagellar basal-body rod protein FlgG identified by similarity to SP:P16439%3B match to protein family HMM PF00460 gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1006 TDE1007 TDE1007 flgG flgG 1031401 1032195 + flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1007 TDE1008 TDE1008 TDE1008 1032246 1032866 + flagellar protein identified by similarity to SP:P57427 gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1008 TDE1009 TDE1009 TDE1009 1033093 1035186 - methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1009 TDE1010 TDE1010 uvrA uvrA 1035367 1038231 + excinuclease ABC subunit A The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1010 TDE1011 TDE1011 TDE1011 1038241 1041462 + hypothetical protein identified by similarity to OMNI:TP0515%3B match to protein family HMM TIGR01612 gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1011 TDE1012 TDE1012 TDE1012 1041533 1043986 + tex protein identified by match to protein family HMM PF00575 gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1012 TDE1013 TDE1013 TDE1013 1044067 1044480 - hemerythrin-like protein identified by match to protein family HMM PF01814 gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1013 TDE1014 TDE1014 TDE1014 1044537 1045634 - hypothetical protein gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1014 TDE1015 TDE1015 TDE1015 1045456 1045659 + hypothetical protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1015 TDE1016 TDE1016 TDE1016 1045669 1048073 + protease%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to OMNI:TP0016 gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1016 TDE1017 TDE1017 xseA xseA 1048075 1049271 + exodeoxyribonuclease VII large subunit identified by similarity to SP:P04994%3B match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237 gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1017 TDE1018 TDE1018 TDE1018 1049367 1049795 + hypothetical protein identified by similarity to SP:O83645 gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1018 TDE1019 TDE1019 TDE1019 1049792 1051639 - dicarboxylate transporter DctM subunit gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1019 TDE1020 TDE1020 TDE1020 1051655 1052683 - dicarboxylate transporter periplasmic dicarboxylate-binding protein identified by match to protein family HMM PF03480 gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1020 TDE1021 TDE1021 TDE1021 1052680 1053654 - lipoprotein identified by similarity to SP:O83922 gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1021 TDE1022 TDE1022 TDE1022 1054002 1055078 - ISTde2%2C transposase identified by similarity to GP:15146033%3B match to protein family HMM PF00665%3B match to protein family HMM TIGR01199 gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1022 TDE1023 TDE1023 mamA mamA 1055263 1055682 + methylaspartate mutase subunit S converts methylaspartate to L-glutamate gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1023 TDE1024 TDE1024 TDE1024 1055715 1057094 + hypothetical protein identified by match to protein family HMM TIGR01319 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1024 TDE1025 TDE1025 rpmF rpmF 1057241 1057429 + 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1025 TDE1026 TDE1026 acpP acpP 1057442 1057678 + acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1026 TDE1027 TDE1027 rnc rnc 1057702 1058442 + ribonuclease III identified by similarity to SP:P51833%3B match to protein family HMM PF00035%3B match to protein family HMM PF00636 gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1027 TDE1028 TDE1028 TDE1028 1058584 1058721 + hypothetical protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1028 TDE1029 TDE1029 TDE1029 1058714 1059154 + Hsp20/alpha crystallin identified by match to protein family HMM PF00011 gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1029 TDE1030 TDE1030 TDE1030 1059254 1060102 + hypothetical protein identified by similarity to SP:O83747 gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1030 TDE1031 TDE1031 TDE1031 1060150 1060245 + hypothetical protein gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1031 TDE1032 TDE1032 TDE1032 1060294 1061157 + hypothetical protein identified by similarity to GP:20520278%3B match to protein family HMM TIGR01784 gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1032 TDE1033 TDE1033 TDE1033 1061209 1062555 + polyA polymerase identified by match to protein family HMM PF01743%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1033 TDE1034 TDE1034 TDE1034 1062594 1063526 + magnesium and cobalt transporter identified by match to protein family HMM PF01544 gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1034 TDE1035 TDE1035 TDE1035 1063594 1063920 + PadR family transcriptional regulator identified by match to protein family HMM PF03551 gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1035 TDE1036 TDE1036 TDE1036 1063945 1064613 + hypothetical protein identified by similarity to OMNI:NTL01OI0393 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1036 TDE1037 TDE1037 TDE1037 1064610 1065521 + hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1037 TDE1038 TDE1038 TDE1038 1065495 1067066 - hypothetical protein identified by similarity to OMNI:SP0358 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1038 TDE1039 TDE1039 TDE1039 1067212 1068075 + riboflavin biosynthesis protein identified by similarity to SP:P08391 gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1039 TDE1040 TDE1040 rpsO rpsO 1068079 1068348 + 30S ribosomal protein S15 primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1040 TDE1041 TDE1041 pnp pnp 1068464 1070560 + polynucleotide phosphorylase/polyadenylase identified by similarity to SP:P50849%3B match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726 gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1041 TDE1042 TDE1042 dut dut 1070632 1071066 + deoxyuridine 5'triphosphate nucleotidohydrolase identified by similarity to SP:O83855%3B match to protein family HMM PF00692%3B match to protein family HMM TIGR00576 gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1042 TDE1043 TDE1043 TDE1043 1071085 1072218 + hypothetical protein identified by similarity to OMNI:TP0884%3B match to protein family HMM PF03739 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1043 TDE1044 TDE1044 TDE1044 1072215 1073288 + hypothetical protein identified by match to protein family HMM PF03739 gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1044 TDE1045 TDE1045 TDE1045 1073380 1073799 + hypothetical protein identified by similarity to OMNI:NTL03CP0228%3B match to protein family HMM PF04304 gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1045 TDE1046 TDE1046 TDE1046 1073786 1074136 + hypothetical protein identified by similarity to SP:P25728 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1046 TDE1047 TDE1047 rpsL rpsL 1074237 1074611 + 30S ribosomal protein S12 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1047 TDE1048 TDE1048 rpsG rpsG 1074622 1075092 + 30S ribosomal protein S7 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1048 TDE1049 TDE1049 fusA-2 fusA-2 1075427 1077514 + elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1049 TDE1050 TDE1050 TDE1050 1077527 1078210 + hypothetical protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1050 TDE1051 TDE1051 TDE1051 1078302 1078586 - hypothetical protein identified by similarity to OMNI:TP0992 gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1051 TDE1052 TDE1052 TDE1052 1078802 1078960 - rubredoxin identified by match to protein family HMM PF00301 gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1052 TDE1053 TDE1053 TDE1053 1079020 1080816 - lipoprotein identified by similarity to OMNI:TP0622 gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1053 TDE1054 TDE1054 TDE1054 1080980 1083058 + methyl-accepting chemotaxis protein identified by similarity to GP:15023694%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1054 TDE1055 TDE1055 TDE1055 1083072 1084421 - MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1055 TDE1056 TDE1056 TDE1056 1085350 1085955 + hypothetical protein identified by similarity to GP:2429097%3B match to protein family HMM PF03781 gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1056 TDE1057 TDE1057 TDE1057 1086195 1086335 - hypothetical protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1057 TDE1058 TDE1058 TDE1058 1086322 1086456 - hypothetical protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1058 TDE1059 TDE1059 TDE1059 1086588 1086695 - hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1059 TDE1060 TDE1060 TDE1060 1086659 1086793 + hypothetical protein gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1060 TDE1061 TDE1061 TDE1061 1086786 1088570 + ABC transporter ATP-binding protein/peptidase identified by similarity to SP:P33116%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1061 TDE1062 TDE1062 TDE1062 1088570 1090447 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1062 TDE1063 TDE1063 metG metG 1090647 1093028 + methionyl-tRNA synthetase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1063 TDE1064 TDE1064 TDE1064 1093121 1093756 - hypothetical protein identified by similarity to OMNI:NTL01FN1612 gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1064 TDE1065 TDE1065 TDE1065 1093753 1094241 - hypothetical protein identified by similarity to OMNI:NTL01FN1611 gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1065 TDE1066 TDE1066 TDE1066 1094425 1094634 - hypothetical protein gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1066 TDE1067 TDE1067 TDE1067 1094634 1095791 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1067 TDE1068 TDE1068 TDE1068 1095784 1096776 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by similarity to GP:3757817%3B match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1068 TDE1069 TDE1069 TDE1069 1096773 1097789 - oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1069 TDE1070 TDE1070 TDE1070 1097790 1098815 - oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1070 TDE1071 TDE1071 oppA oppA 1098903 1100678 - peptide ABC transporter peptide-binding protein OppA identified by similarity to GP:2811252%3B match to protein family HMM PF00496 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1071 TDE1072 TDE1072 TDE1072 1100881 1103496 + lipoprotein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1072 TDE1073 TDE1073 TDE1073 1103655 1104695 + oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1073 TDE1074 TDE1074 TDE1074 1104695 1106089 + oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1074 TDE1075 TDE1075 TDE1075 1106102 1107079 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1075 TDE1076 TDE1076 TDE1076 1107076 1108116 + oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1076 TDE1077 TDE1077 TDE1077 1108535 1109740 + hypothetical protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1077 TDE1078 TDE1078 TDE1078 1109879 1111105 + metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1078 TDE1079 TDE1079 TDE1079 1111260 1111865 + DNA-binding protein/PTS system%2C IIA component identified by match to protein family HMM PF00359%3B match to protein family HMM TIGR01764 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1079 TDE1080 TDE1080 ksgA ksgA 1111878 1112759 + dimethyladenosine transferase catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1080 TDE1081 TDE1081 TDE1081 1112779 1113288 + hypothetical protein identified by similarity to SP:O83358 gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1081 TDE1082 TDE1082 TDE1082 1113275 1114312 + ribosomal large subunit pseudouridine synthase D identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005 gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1082 TDE1083 TDE1083 TDE1083 1114306 1115091 + RNA pseudouridylate synthase identified by match to protein family HMM PF00849 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1083 TDE1084 TDE1084 TDE1084 1115024 1116376 - folylpolyglutamate synthetase identified by similarity to SP:Q05865%3B match to protein family HMM TIGR01499 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1084 TDE1085 TDE1085 murC murC 1116468 1117910 + UDP-N-acetylmuramate--L-alanine ligase Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1085 TDE1086 TDE1086 TDE1086 1117926 1118792 + hypothetical protein identified by similarity to OMNI:NTL03CP1750%3B match to protein family HMM PF03755%3B match to protein family HMM TIGR00255 gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1086 TDE1087 TDE1087 cmk cmk 1118810 1119373 + cytidylate kinase catalyzes the formation of (d)CDP from ATP and (d)CMP gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1087 TDE1088 TDE1088 TDE1088 1119365 1120045 - hypothetical protein identified by similarity to SP:O83467 gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1088 TDE1089 TDE1089 TDE1089 1120060 1121034 - hypothetical protein identified by similarity to OMNI:TP0455 gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1089 TDE1090 TDE1090 thrS thrS 1121246 1123003 + threonyl-tRNA synthetase catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1090 TDE1091 TDE1091 TDE1091 1123107 1123865 - hypothetical protein gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1091 TDE1092 TDE1092 TDE1092 1123896 1127255 - hypothetical protein identified by similarity to OMNI:TP0990%3B match to protein family HMM PF00515%3B match to protein family HMM TIGR01612 gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1092 TDE1093 TDE1093 TDE1093 1127514 1128218 + hypothetical protein identified by similarity to SP:O83378 gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1093 TDE1094 TDE1094 TDE1094 1128205 1129782 + hypothetical protein identified by similarity to OMNI:TP0358%3B match to protein family HMM PF02651%3B match to protein family HMM PF03065 gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1094 TDE1095 TDE1095 alr alr 1129966 1131105 + alanine racemase identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492 gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1095 TDE1096 TDE1096 ispH ispH 1131129 1131998 + hydroxymethylbutenyl pyrophosphate reductase identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216 gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1096 TDE1097 TDE1097 TDE1097 1132002 1132856 - acetyltransferase identified by match to protein family HMM PF00583 gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1097 TDE1098 TDE1098 TDE1098 1132860 1133768 - hypothetical protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1098 TDE1099 TDE1099 TDE1099 1133826 1134341 - acetyltransferase identified by similarity to OMNI:NTL01LI0629%3B match to protein family HMM PF00583 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1099 TDE1100 TDE1100 TDE1100 1134358 1134762 - acetyltransferase identified by match to protein family HMM PF00583 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1100 TDE1101 TDE1101 TDE1101 1134753 1135232 - acetyltransferase identified by match to protein family HMM PF00583 gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1101 TDE1102 TDE1102 TDE1102 1135354 1136265 - hypothetical protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1102 TDE1103 TDE1103 TDE1103 1136500 1136730 + hypothetical protein gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1103 TDE1104 TDE1104 truB truB 1136803 1137876 - tRNA pseudouridine synthase B identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431 gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1104 TDE1105 TDE1105 rbfA rbfA 1137891 1138289 - ribosome-binding factor A identified by similarity to SP:P09170%3B match to protein family HMM PF02033%3B match to protein family HMM TIGR00082 gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1105 TDE1106 TDE1106 infB infB 1138282 1140972 - translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1106 TDE1107 TDE1107 nusA nusA 1140980 1142467 - transcription elongation factor NusA modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1107 TDE1108 TDE1108 TDE1108 1142503 1142949 - hypothetical protein identified by similarity to OMNI:TP0893%3B match to protein family HMM PF02576 gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1108 TDE1109 TDE1109 TDE1109 1143220 1144389 + pyridoxal-dependent family decarboxylase identified by similarity to SP:O50657%3B match to protein family HMM PF00278%3B match to protein family HMM PF02784 gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1109 TDE1110 TDE1110 TDE1110 1144412 1145731 + lipoprotein identified by match to protein family HMM PF00560 gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1110 TDE1111 TDE1111 TDE1111 1145770 1146999 + transporter gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1111 TDE1112 TDE1112 adk adk 1147058 1147687 + adenylate kinase identified by similarity to SP:P16304%3B match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351 gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1112 TDE1113 TDE1113 TDE1113 1147819 1148340 - hypothetical protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1113 TDE1114 TDE1114 TDE1114 1148324 1148995 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1114 TDE1115 TDE1115 TDE1115 1149128 1149436 - DNA-binding protein identified by similarity to OMNI:NMB1891 gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1115 TDE1116 TDE1116 TDE1116 1149446 1149754 - hypothetical protein identified by similarity to OMNI:VCA0468 gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1116 TDE1117 TDE1117 TDE1117 1149782 1149931 + hypothetical protein gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1117 TDE1118 TDE1118 tpl tpl 1149972 1151351 - tyrosine phenol-lyase catalyzes the formation of phenol and pyruvate from tyrosine gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1118 TDE1119 TDE1119 TDE1119 1151467 1152087 + hypothetical protein identified by similarity to SP:O83688 gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1119 TDE1120 TDE1120 TDE1120 1152068 1152889 + hypothetical protein gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1120 TDE1121 TDE1121 TDE1121 1152904 1153446 - hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1121 TDE1122 TDE1122 TDE1122 1153463 1153801 - anti-anti-sigma factor identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377 gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1122 TDE1123 TDE1123 TDE1123 1153827 1155512 - sigma factor regulatory protein identified by similarity to SP:P40399 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1123 TDE1124 TDE1124 TDE1124 1155586 1156263 - hypothetical protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1124 TDE1125 TDE1125 TDE1125 1156274 1157647 - TPR identified by similarity to OMNI:TP0471%3B match to protein family HMM PF00515 gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1125 TDE1126 TDE1126 TDE1126 1157685 1158425 + TPR identified by match to protein family HMM PF00515 gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1126 TDE1127 TDE1127 TDE1127 1158418 1160595 + TPR identified by match to protein family HMM PF00515 gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1127 TDE1128 TDE1128 TDE1128 1160676 1161845 + hypothetical protein identified by similarity to SP:O83479 gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1128 TDE1129 TDE1129 TDE1129 1161870 1162583 + lipoprotein gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1129 TDE1130 TDE1130 TDE1130 1162593 1163300 + methyltransferase identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091 gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1130 TDE1131 TDE1131 TDE1131 1163322 1163591 + hypothetical protein gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1131 TDE1132 TDE1132 aroC aroC 1163555 1164640 + chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1132 TDE1133 TDE1133 TDE1133 1164843 1165148 - hypothetical protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1133 TDE1134 TDE1134 TDE1134 1165152 1165277 - hypothetical protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1134 TDE1135 TDE1135 TDE1135 1165282 1165632 - hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1135 TDE1136 TDE1136 TDE1136 1165633 1166139 - M23/M37 peptidase identified by match to protein family HMM PF01551 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1136 TDE1137 TDE1137 TDE1137 1166156 1166839 - hypothetical protein identified by similarity to GP:4049677 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1137 TDE1138 TDE1138 TDE1138 1166965 1167645 - hypothetical protein gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1138 TDE1139 TDE1139 TDE1139 1167647 1168705 - hypothetical protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1139 TDE1140 TDE1140 TDE1140 1168820 1169935 - hypothetical protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1140 TDE1141 TDE1141 TDE1141 1169950 1171533 - tail fiber identified by similarity to GP:6901608 gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1141 TDE1142 TDE1142 TDE1142 1171558 1179627 - phage minor structural protein identified by match to protein family HMM TIGR01612 gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1142 TDE1143 TDE1143 TDE1143 1179645 1181924 - hypothetical protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1143 TDE1144 TDE1144 TDE1144 1181938 1182945 - hypothetical protein gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1144 TDE1145 TDE1145 TDE1145 1182958 1184901 - hypothetical protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1145 TDE1146 TDE1146 TDE1146 1184914 1185504 - hypothetical protein gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1146 TDE1147 TDE1147 TDE1147 1185619 1186050 - hypothetical protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1147 TDE1148 TDE1148 TDE1148 1186064 1186447 - hypothetical protein gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1148 TDE1149 TDE1149 TDE1149 1186516 1187478 - hypothetical protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1149 TDE1150 TDE1150 TDE1150 1187491 1188333 - hypothetical protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1150 TDE1151 TDE1151 TDE1151 1188358 1188624 - hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1151 TDE1152 TDE1152 TDE1152 1188617 1190299 - head-to-tail joining protein identified by similarity to SP:P03728 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1152 TDE1153 TDE1153 TDE1153 1190352 1190948 - hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1153 TDE1154 TDE1154 TDE1154 1190941 1191186 - hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1154 TDE1155 TDE1155 TDE1155 1191246 1191545 - hypothetical protein gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1155 TDE1156 TDE1156 TDE1156 1191711 1192025 - hypothetical protein gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1156 TDE1157 TDE1157 TDE1157 1192130 1193383 - phage terminase%2C large subunit identified by similarity to GP:3249594 gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1157 TDE1158 TDE1158 TDE1158 1193503 1194114 - phage terminase small subunit identified by similarity to SP:P39785 gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1158 TDE1159 TDE1159 TDE1159 1194118 1194510 - hypothetical protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1159 TDE1160 TDE1160 TDE1160 1194507 1195931 - hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1160 TDE1161 TDE1161 TDE1161 1195910 1196131 - hypothetical protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1161 TDE1162 TDE1162 TDE1162 1196146 1197774 - ParB-like nuclease identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1162 TDE1163 TDE1163 TDE1163 1197790 1198020 - hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1163 TDE1164 TDE1164 TDE1164 1198023 1198256 - hypothetical protein identified by similarity to OMNI:SAG0589 gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1164 TDE1165 TDE1165 TDE1165 1198271 1198480 - hypothetical protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1165 TDE1166 TDE1166 TDE1166 1198484 1198807 - hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1166 TDE1167 TDE1167 TDE1167 1198804 1199028 - hypothetical protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1167 TDE1168 TDE1168 TDE1168 1199039 1199572 - hypothetical protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1168 TDE1169 TDE1169 TDE1169 1199569 1199814 - phage DNA-binding protein excisionase gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1169 TDE1170 TDE1170 TDE1170 1199940 1200302 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1170 TDE1171 TDE1171 TDE1171 1200315 1201118 + hypothetical protein identified by similarity to GP:5852329 gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1171 TDE1172 TDE1172 TDE1172 1201146 1201340 + hypothetical protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1172 TDE1173 TDE1173 TDE1173 1201347 1202411 - phage integrase family site specific recombinase identified by match to protein family HMM PF00589 gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1173 TDE1174 TDE1174 TDE1174 1202741 1203490 - hypothetical protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1174 TDE1175 TDE1175 groEL groEL 1203607 1205241 - chaperonin GroEL 60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1175 TDE1176 TDE1176 TDE1176 1205372 1206640 - oxygen-independent coproporphyrinogen III oxidase identified by match to protein family HMM PF04055 gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1176 TDE1177 TDE1177 TDE1177 1206684 1207187 - flavodoxin gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1177 TDE1178 TDE1178 TDE1178 1207215 1208003 - iron compound ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1178 TDE1179 TDE1179 TDE1179 1208019 1208996 - iron compound ABC transporter permease identified by similarity to SP:Q56992%3B match to protein family HMM PF01032 gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1179 TDE1180 TDE1180 TDE1180 1209009 1209923 - iron compound ABC transporter periplasmic iron compound-binding protein identified by match to protein family HMM PF01497 gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1180 TDE1181 TDE1181 TDE1181 1210032 1210598 + methyltransferase identified by similarity to GP:295169 gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1181 TDE1182 TDE1182 TDE1182 1210598 1210738 + hypothetical protein gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1182 TDE1183 TDE1183 TDE1183 1210752 1211414 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1183 TDE1184 TDE1184 TDE1184 1211474 1211581 + hypothetical protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1184 TDE1185 TDE1185 TDE1185 1211687 1213063 - lipoprotein gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1185 TDE1186 TDE1186 TDE1186 1213075 1213575 - hypothetical protein gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1186 TDE1187 TDE1187 TDE1187 1213728 1214645 + hypothetical protein identified by similarity to OMNI:NTL01FN0816 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1187 TDE1188 TDE1188 pntB pntB 1214664 1216712 - NAD(P) transhydrogenase subunit beta identified by match to protein family HMM PF02233 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1188 TDE1189 TDE1189 TDE1189 1216709 1218165 - NAD(P) transhydrogenase%2C alpha subunit%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P07001 gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1189 TDE1190 TDE1190 TDE1190 1218363 1218803 + hypothetical protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1190 TDE1191 TDE1191 TDE1191 1218853 1219278 + hypothetical protein gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1191 TDE1192 TDE1192 TDE1192 1219472 1219633 + hypothetical protein gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1192 TDE1193 TDE1193 TDE1193 1219616 1219747 - hypothetical protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1193 TDE1194 TDE1194 TDE1194 1225113 1227683 + hypothetical protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1194 TDE1195 TDE1195 TDE1195 1227724 1229781 - prolyl endopeptidase identified by similarity to SP:P27028%3B match to protein family HMM PF00326%3B match to protein family HMM PF02897 gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1195 TDE1196 TDE1196 TDE1196 1229881 1230027 - hypothetical protein gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1196 TDE1197 TDE1197 TDE1197 1230092 1230526 + cell division protein MraZ MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1197 TDE1198 TDE1198 mraW mraW 1230532 1231479 + S-adenosyl-methyltransferase MraW identified by similarity to SP:O51286%3B match to protein family HMM PF01795%3B match to protein family HMM TIGR00006 gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1198 TDE1199 TDE1199 TDE1199 1231481 1231765 + cell division protein FtsL gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1199 TDE1200 TDE1200 murF murF 1231758 1233188 + UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01143 gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1200 TDE1201 TDE1201 TDE1201 1233189 1234322 + cell cycle protein FtsW identified by similarity to SP:P07373%3B match to protein family HMM PF01098 gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1201 TDE1202 TDE1202 TDE1202 1234323 1235180 + cell division protein FtsQ identified by similarity to SP:P16655%3B match to protein family HMM PF03799 gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1202 TDE1203 TDE1203 ftsA ftsA 1235173 1236417 + cell division protein FtsA identified by similarity to SP:P06137%3B match to protein family HMM PF02491%3B match to protein family HMM TIGR01174 gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1203 TDE1204 TDE1204 ftsZ ftsZ 1236443 1237726 + cell division protein FtsZ GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1204 TDE1205 TDE1205 xerD xerD 1237829 1238653 + integrase/recombinase XerD identified by similarity to SP:P21891%3B match to protein family HMM PF00589 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1205 TDE1206 TDE1206 TDE1206 1238650 1239372 + TPR identified by similarity to SP:Q57105%3B match to protein family HMM PF00515 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1206 TDE1207 TDE1207 TDE1207 1239376 1240308 + DNA processing protein DprA identified by similarity to OMNI:TP0393%3B match to protein family HMM PF02481%3B match to protein family HMM TIGR00732 gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1207 TDE1208 TDE1208 topA topA 1240327 1242492 + DNA topoisomerase I identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051 gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1208 TDE1209 TDE1209 TDE1209 1242485 1243402 + phage integrase family site specific recombinase identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1209 TDE1210 TDE1210 hslV hslV 1243469 1244005 + ATP-dependent protease peptidase subunit heat shock protein involved in degradation of misfolded proteins gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1210 TDE1211 TDE1211 hslU hslU 1244005 1245462 + ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1211 TDE1212 TDE1212 flgB flgB 1245514 1245933 + flagellar basal-body rod protein FlgB identified by similarity to SP:P75934%3B match to protein family HMM TIGR01396 gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1212 TDE1213 TDE1213 flgC flgC 1245957 1246412 + flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1213 TDE1214 TDE1214 fliE fliE 1246447 1246812 + flagellar hook-basal body protein FliE forms a junction between the M-ring and FlgB during flagella biosynthesis gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1214 TDE1215 TDE1215 fliF fliF 1246876 1248579 + flagellar MS-ring protein the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1215 TDE1216 TDE1216 fliG fliG 1248581 1249630 + flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1216 TDE1217 TDE1217 fliH fliH 1249651 1250577 + flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1217 TDE1218 TDE1218 fliI fliI 1250587 1252011 + flagellum-specific ATP synthase FliI identified by similarity to SP:P23445%3B match to protein family HMM PF00006%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01026 gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1218 TDE1219 TDE1219 TDE1219 1252011 1252475 + flagellar protein FliJ identified by similarity to SP:P20487 gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1219 TDE1220 TDE1220 TDE1220 1252490 1254922 + hypothetical protein identified by similarity to SP:O83160 gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1220 TDE1221 TDE1221 TDE1221 1254936 1256138 + glycosyl hydrolase identified by match to protein family HMM PF00933 gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1221 TDE1222 TDE1222 TDE1222 1256131 1256799 - iron-dependent transcriptional regulator identified by match to protein family HMM PF02742 gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1222 TDE1223 TDE1223 troD troD 1256825 1257925 - zinc ABC transporter permease identified by similarity to SP:P96119%3B match to protein family HMM PF00950 gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1223 TDE1224 TDE1224 troC troC 1257930 1258844 - zinc ABC transporter permease identified by similarity to SP:P96118%3B match to protein family HMM PF00950 gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1224 TDE1225 TDE1225 troB troB 1258841 1259608 - zinc ABC transporter ATP-binding protein identified by similarity to SP:P96117%3B match to protein family HMM PF00005 gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1225 TDE1226 TDE1226 troA troA 1259635 1260573 - zinc ABC transporter periplasmic zinc-binding protein identified by similarity to SP:P96116%3B match to protein family HMM PF01297 gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1226 TDE1227 TDE1227 TDE1227 1260653 1261987 + hypothetical protein identified by similarity to GP:6683568 gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1227 TDE1228 TDE1228 TDE1228 1262029 1262556 + pentapeptide repeat-containing protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1228 TDE1229 TDE1229 TDE1229 1262553 1263140 + hypothetical protein identified by similarity to SP:O83419 gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1229 TDE1230 TDE1230 TDE1230 1263206 1263565 + hypothetical protein gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1230 TDE1231 TDE1231 TDE1231 1263569 1265293 - hypothetical protein gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1231 TDE1232 TDE1232 TDE1232 1265443 1267122 - hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1232 TDE1233 TDE1233 TDE1233 1267343 1267669 + hypothetical protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1233 TDE1234 TDE1234 TDE1234 1267721 1269406 - hypothetical protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1234 TDE1235 TDE1235 TDE1235 1269516 1269617 + hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1235 TDE1236 TDE1236 tpiA tpiA 1269626 1270378 + triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1236 TDE1237 TDE1237 TDE1237 1270508 1270876 + hypothetical protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1237 TDE1238 TDE1238 secG secG 1270955 1271305 + preprotein translocase subunit SecG identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1238 TDE1239 TDE1239 TDE1239 1271307 1271453 - hypothetical protein gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1239 TDE1240 TDE1240 TDE1240 1271520 1272422 + PhoH protein identified by similarity to SP:P77349%3B match to protein family HMM PF02562 gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1240 TDE1241 TDE1241 TDE1241 1272409 1274712 + hypothetical protein identified by similarity to GP:3322949%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1241 TDE1242 TDE1242 TDE1242 1274705 1275172 + metalloprotease identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043 gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1242 TDE1243 TDE1243 tlyC tlyC 1275175 1275951 + hemolysin C identified by similarity to SP:Q54318%3B match to protein family HMM PF00571%3B match to protein family HMM PF03471 gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1243 TDE1244 TDE1244 TDE1244 1275963 1277939 + TPR identified by similarity to OMNI:TP0648%3B match to protein family HMM PF00515 gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1244 TDE1245 TDE1245 TDE1245 1277995 1278984 - hypothetical protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1245 TDE1246 TDE1246 TDE1246 1279179 1281707 + lipoprotein identified by match to protein family HMM TIGR01376 gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1246 TDE1247 TDE1247 TDE1247 1281763 1282485 + hypothetical protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1247 TDE1248 TDE1248 TDE1248 1282736 1283680 + hypothetical protein identified by similarity to OMNI:CT0062%3B match to protein family HMM PF01882 gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1248 TDE1249 TDE1249 TDE1249 1283665 1284600 + hypothetical protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1249 TDE1250 TDE1250 TDE1250 1284593 1285591 + batA protein identified by similarity to GP:4838138%3B match to protein family HMM PF00092 gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1250 TDE1251 TDE1251 TDE1251 1285588 1286556 + batB protein identified by similarity to GP:4838139%3B match to protein family HMM PF00092 gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1251 TDE1252 TDE1252 TDE1252 1286540 1287154 + lipoprotein identified by similarity to OMNI:BB0171%3B match to protein family HMM PF00515 gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1252 TDE1253 TDE1253 TDE1253 1287103 1288533 + hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1253 TDE1254 TDE1254 TDE1254 1288551 1289063 + Smr identified by match to protein family HMM PF01713 gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1254 TDE1255 TDE1255 TDE1255 1289067 1289747 - hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1255 TDE1256 TDE1256 TDE1256 1289791 1290969 - hypothetical protein identified by match to protein family HMM PF01966 gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1256 TDE1257 TDE1257 TDE1257 1291018 1291830 + hypothetical protein identified by similarity to SP:O83744 gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1257 TDE1258 TDE1258 TDE1258 1291878 1292273 - grdX protein identified by similarity to GP:11065684 gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1258 TDE1259 TDE1259 TDE1259 1292336 1293760 - amino acid carrier identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835 gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1259 TDE1260 TDE1260 TDE1260 1294168 1295736 + cholinephosphate cytidylyltransferase/choline kinase identified by similarity to GP:2708632%3B similarity to GP:20150595%3B match to protein family HMM PF00483%3B match to protein family HMM PF01633 gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1260 TDE1261 TDE1261 TDE1261 1295733 1297301 + choline/carnitine/betaine transporter identified by match to protein family HMM PF02028%3B match to protein family HMM TIGR00842 gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1261 TDE1262 TDE1262 TDE1262 1297303 1297422 - hypothetical protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1262 TDE1263 TDE1263 TDE1263 1297444 1298196 + hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1263 TDE1264 TDE1264 TDE1264 1298242 1299366 - hypothetical protein identified by similarity to SP:O83461 gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1264 TDE1265 TDE1265 ispG ispG 1299363 1300526 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612 gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1265 TDE1266 TDE1266 purM purM 1300578 1301678 - phosphoribosylaminoimidazole synthetase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1266 TDE1267 TDE1267 purD purD 1301717 1303030 - phosphoribosylamine--glycine ligase identified by similarity to SP:P12039%3B match to protein family HMM PF01071%3B match to protein family HMM PF02842%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877 gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1267 TDE1268 TDE1268 tdeIR tdeIR 1303110 1303880 - type II restriction endonuclease TdeI gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1268 TDE1269 TDE1269 TDE1269 1303923 1304612 - hypothetical protein gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1269 TDE1270 TDE1270 TDE1270 1304667 1305101 - hypothetical protein identified by similarity to OMNI:NTL01TT0279%3B match to protein family HMM PF02566 gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1270 TDE1271 TDE1271 TDE1271 1305119 1306090 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1271 TDE1272 TDE1272 TDE1272 1306080 1307066 - oligopeptide/dipeptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1272 TDE1273 TDE1273 TDE1273 1307119 1308714 - oligopeptide/dipeptide ABC transporter peptide-binding protein identified by match to protein family HMM PF00496 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1273 TDE1274 TDE1274 TDE1274 1308733 1309650 - oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1274 TDE1275 TDE1275 TDE1275 1309660 1310613 - oligopeptide/dipeptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1275 TDE1276 TDE1276 TDE1276 1310617 1310709 - hypothetical protein gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1276 TDE1277 TDE1277 TDE1277 1310821 1312302 + Fe-hydrogenase large subunit identified by similarity to GP:488597%3B match to protein family HMM PF00037%3B match to protein family HMM PF02906 gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1277 TDE1278 TDE1278 TDE1278 1312318 1312878 - hypothetical protein identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440 gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1278 TDE1279 TDE1279 purL purL 1312905 1315205 - phosphoribosylformylglycinamidine synthase II identified by similarity to SP:P12042%3B match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01736 gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1279 TDE1280 TDE1280 TDE1280 1315840 1316541 - hypothetical protein identified by similarity to OMNI:NTL01FN1381 gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1280 TDE1281 TDE1281 TDE1281 1316640 1316912 + hypothetical protein identified by similarity to OMNI:NTL03ST4342 gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1281 TDE1282 TDE1282 TDE1282 1316941 1317531 + hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1282 TDE1283 TDE1283 TDE1283 1317543 1318853 + extracellular solute-binding lipoprotein identified by match to protein family HMM PF01547 gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1283 TDE1284 TDE1284 TDE1284 1318860 1320983 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM TIGR01369 gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1284 TDE1285 TDE1285 TDE1285 1321064 1322131 + flagellar motor switch protein FliG identified by similarity to SP:P23448%3B match to protein family HMM PF01706 gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1285 TDE1286 TDE1286 TDE1286 1322197 1322877 + TPR identified by match to protein family HMM PF00515 gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1286 TDE1287 TDE1287 mfd mfd 1322878 1326345 + transcription-repair coupling factor identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM TIGR00580%3B match to protein family HMM TIGR01612 gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1287 TDE1288 TDE1288 TDE1288 1326457 1327335 + CAAX amino terminal protease identified by match to protein family HMM PF02517 gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1288 TDE1289 TDE1289 TDE1289 1327454 1327570 + hypothetical protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1289 TDE1290 TDE1290 TDE1290 1327539 1328708 + hypothetical protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1290 TDE1291 TDE1291 TDE1291 1328728 1329303 - hypothetical protein identified by match to protein family HMM PF01966 gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1291 TDE1292 TDE1292 TDE1292 1329404 1330711 - TldD/PmbA identified by match to protein family HMM PF01523 gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1292 TDE1293 TDE1293 TDE1293 1330711 1332093 - TldD/PmbA identified by match to protein family HMM PF01523 gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1293 TDE1294 TDE1294 ptsH ptsH 1332145 1332411 - phosphocarrier protein HPr identified by match to protein family HMM PF00381 gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1294 TDE1295 TDE1295 TDE1295 1332424 1333377 - HPr(Ser) kinase/phosphatase%2C degenerate%3B this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error%3B identified by similarity to SP:O83600 gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1295 TDE1296 TDE1296 TDE1296 1333554 1333844 - ribosomal subunit interface protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1296 TDE1297 TDE1297 TDE1297 1333967 1334872 - LysM/M23/M37 peptidase identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551 gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1297 TDE1298 TDE1298 TDE1298 1334872 1335405 - cyclic nucleotide binding identified by match to protein family HMM PF00027 gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1298 TDE1299 TDE1299 TDE1299 1335507 1336703 - hypothetical protein identified by similarity to OMNI:NTL01CJ00017 gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1299 TDE1300 TDE1300 TDE1300 1336700 1337509 - hypothetical protein identified by similarity to OMNI:TP0443 gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1300 TDE1301 TDE1301 recN recN 1337521 1339206 - DNA repair protein RecN identified by match to protein family HMM TIGR00634 gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1301 TDE1302 TDE1302 TDE1302 1339303 1339734 - hemerythrin identified by match to protein family HMM PF01814 gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1302 TDE1303 TDE1303 TDE1303 1339739 1339930 - hypothetical protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1303 TDE1304 TDE1304 TDE1304 1339856 1340008 + hypothetical protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1304 TDE1305 TDE1305 TDE1305 1340240 1340458 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1305 TDE1306 TDE1306 TDE1306 1340542 1340964 - hypothetical protein gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1306 TDE1307 TDE1307 TDE1307 1341094 1342581 + hypothetical protein gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1307 TDE1308 TDE1308 tkt tkt 1342603 1344630 + transketolase identified by similarity to SP:P45694%3B match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1308 TDE1309 TDE1309 TDE1309 1344675 1346102 + modulator of DNA gyrase identified by match to protein family HMM PF01523 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1309 TDE1310 TDE1310 TDE1310 1346102 1347400 + modulator of DNA gyrase identified by match to protein family HMM PF01523 gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1310 TDE1311 TDE1311 TDE1311 1347511 1349115 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1311 TDE1312 TDE1312 TDE1312 1349228 1350775 + hypothetical protein identified by similarity to OMNI:NTL03SP0417%3B match to protein family HMM PF05872 gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1312 TDE1313 TDE1313 TDE1313 1350790 1351326 + signal peptidase I identified by match to protein family HMM PF00461 gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1313 TDE1314 TDE1314 TDE1314 1351314 1353176 + penicillin-binding protein identified by similarity to GP:9408610%3B match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793 gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1314 TDE1315 TDE1315 TDE1315 1353157 1354893 + hypothetical protein identified by similarity to SP:O83742%3B match to protein family HMM PF01973 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1315 TDE1316 TDE1316 TDE1316 1354881 1355084 + hypothetical protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1316 TDE1317 TDE1317 TDE1317 1355060 1355554 - hypothetical protein gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1317 TDE1318 TDE1318 TDE1318 1355587 1356741 + hypothetical protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1318 TDE1319 TDE1319 TDE1319 1356738 1357910 + hypothetical protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1319 TDE1320 TDE1320 TDE1320 1357904 1359478 + ComEC/Rec2-like protein identified by similarity to OMNI:TP0336%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360 gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1320 TDE1321 TDE1321 TDE1321 1359475 1360083 + hypothetical protein identified by match to protein family HMM PF01205%3B match to protein family HMM TIGR00257 gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1321 TDE1322 TDE1322 TDE1322 1360110 1360826 - hypothetical protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1322 TDE1323 TDE1323 TDE1323 1360900 1361028 + hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1323 TDE1324 TDE1324 TDE1324 1361005 1361700 - hypothetical protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1324 TDE1325 TDE1325 TDE1325 1361710 1361811 - hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1325 TDE1326 TDE1326 TDE1326 1361801 1361902 + hypothetical protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1326 TDE1327 TDE1327 TDE1327 1361879 1363039 - hypothetical protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1327 TDE1328 TDE1328 TDE1328 1363052 1363492 - hypothetical protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1328 TDE1329 TDE1329 TDE1329 1363643 1365406 + AAA ATPase identified by match to protein family HMM PF00004 gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1329 TDE1330 TDE1330 nrdR nrdR 1365519 1365974 + transcriptional regulator NrdR identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244 gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1330 TDE1331 TDE1331 nrdD nrdD 1366008 1368134 + anaerobic ribonucleoside triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1331 TDE1332 TDE1332 TDE1332 1368182 1369138 + hflK protein identified by similarity to SP:P25662%3B match to protein family HMM PF01145%3B match to protein family HMM TIGR01933 gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1332 TDE1333 TDE1333 TDE1333 1369144 1370208 + hflC protein identified by similarity to SP:P25661%3B match to protein family HMM PF01145%3B match to protein family HMM TIGR01932 gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1333 TDE1334 TDE1334 TDE1334 1370284 1370934 + hypothetical protein identified by similarity to OMNI:TP0567 gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1334 TDE1335 TDE1335 TDE1335 1370956 1372428 + alginate O-acetylation protein identified by similarity to GP:1245347%3B match to protein family HMM PF03062 gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1335 TDE1336 TDE1336 TDE1336 1372443 1373840 + hypothetical protein identified by similarity to OMNI:TP0565 gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1336 TDE1337 TDE1337 TDE1337 1373856 1374896 - hypothetical protein identified by similarity to OMNI:NTL01OI3179 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1337 TDE1338 TDE1338 ispE ispE 1375029 1375883 + 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase identified by similarity to SP:O83386%3B match to protein family HMM PF00288%3B match to protein family HMM TIGR00154 gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1338 TDE1339 TDE1339 TDE1339 1375947 1376228 + stage V sporulation protein G identified by similarity to SP:P28015%3B match to protein family HMM PF04026 gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1339 TDE1340 TDE1340 TDE1340 1376457 1377092 + 50S ribosomal protein L25 the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1340 TDE1341 TDE1341 TDE1341 1377203 1378585 + hypothetical protein identified by similarity to SP:O83388%3B match to protein family HMM PF01171 gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1341 TDE1342 TDE1342 TDE1342 1378582 1380621 + hypothetical protein identified by similarity to SP:O83389 gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1342 TDE1343 TDE1343 TDE1343 1380686 1382296 + trypsin domain/PDZ identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1343 TDE1344 TDE1344 TDE1344 1382532 1383410 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1344 TDE1345 TDE1345 dnaG dnaG 1383579 1385366 + DNA primase identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM TIGR01391 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1345 TDE1346 TDE1346 TDE1346 1385359 1387218 + RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1346 TDE1347 TDE1347 TDE1347 1387265 1388092 + hypothetical protein identified by similarity to GP:15022435%3B match to protein family HMM PF02591 gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1347 TDE1348 TDE1348 TDE1348 1388473 1389408 + TPR identified by similarity to OMNI:TP0496%3B match to protein family HMM PF00515 gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1348 TDE1349 TDE1349 mreB mreB 1389426 1390460 + rod shape-determining protein MreB functions in MreBCD complex in some organisms gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1349 TDE1350 TDE1350 mreC mreC 1390467 1391330 + rod shape-determining protein MreC in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1350 TDE1351 TDE1351 mreD mreD 1391335 1391853 + rod shape-determining protein MreD identified by match to protein family HMM PF04093 gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1351 TDE1352 TDE1352 TDE1352 1391840 1393693 + penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717 gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1352 TDE1353 TDE1353 rodA rodA 1393690 1394991 + rod shape-determining protein RodA identified by similarity to SP:O83514%3B match to protein family HMM PF01098 gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1353 TDE1354 TDE1354 TDE1354 1395026 1395265 + hypothetical protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1354 TDE1355 TDE1355 TDE1355 1395249 1395587 + hypothetical protein gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1355 TDE1356 TDE1356 TDE1356 1395764 1396759 - lipoprotein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1356 TDE1357 TDE1357 galM galM 1396835 1397890 + aldose 1-epimerase identified by similarity to SP:P05149%3B match to protein family HMM PF01263 gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1357 TDE1358 TDE1358 TDE1358 1397872 1397970 + hypothetical protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1358 TDE1359 TDE1359 TDE1359 1397887 1399254 - hypothetical protein gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1359 TDE1360 TDE1360 TDE1360 1399437 1400741 + xanthine/uracil permease identified by match to protein family HMM PF00860 gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1360 TDE1361 TDE1361 TDE1361 1400828 1401166 + hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1361 TDE1362 TDE1362 TDE1362 1401132 1404203 + hypothetical protein gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1362 TDE1363 TDE1363 TDE1363 1404216 1404725 - nitroreductase identified by match to protein family HMM PF00881 gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1363 TDE1364 TDE1364 valS valS 1404903 1407632 + valyl-tRNA synthetase valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1364 TDE1365 TDE1365 TDE1365 1407895 1408473 + TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1365 TDE1366 TDE1366 TDE1366 1408498 1409079 + CDP-alcohol phosphatidyltransferase identified by match to protein family HMM PF01066 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1366 TDE1367 TDE1367 TDE1367 1409117 1409500 + glyoxalase identified by match to protein family HMM PF00903 gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1367 TDE1368 TDE1368 TDE1368 1409517 1409885 - hypothetical protein identified by similarity to OMNI:NTL02SC4173 gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1368 TDE1369 TDE1369 uvrB uvrB 1409894 1411882 - excinuclease ABC subunit B The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1369 TDE1370 TDE1370 TDE1370 1411884 1413374 - hypothetical protein identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197 gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1370 TDE1371 TDE1371 TDE1371 1413388 1415259 - RNB-like identified by match to protein family HMM PF00773 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1371 TDE1372 TDE1372 TDE1372 1415323 1416987 - hypothetical protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1372 TDE1373 TDE1373 TDE1373 1417269 1417931 - hypothetical protein identified by match to protein family HMM PF01966 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1373 TDE1374 TDE1374 TDE1374 1417984 1418088 - hypothetical protein gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1374 TDE1375 TDE1375 coaD coaD 1418221 1418703 + pantetheine-phosphate adenylyltransferase identified by similarity to SP:O83307%3B match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510 gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1375 TDE1376 TDE1376 TDE1376 1418726 1419139 + hypothetical protein gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1376 TDE1377 TDE1377 TDE1377 1419173 1419922 - hypothetical protein identified by similarity to OMNI:NTL02SP1329 gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1377 TDE1378 TDE1378 TDE1378 1419900 1420046 - hypothetical protein identified by similarity to OMNI:NTL01SS01309 gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1378 TDE1379 TDE1379 TDE1379 1420104 1420748 - hypothetical protein gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1379 TDE1380 TDE1380 TDE1380 1420823 1421374 - hypothetical protein identified by similarity to SP:O51122 gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1380 TDE1381 TDE1381 atpE atpE 1421378 1421995 - V-type ATP synthase subunit E produces ATP from ADP in the presence of a proton gradient across the membrane%3B the E subunit is part of the catalytic core of the ATP synthase complex gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1381 TDE1382 TDE1382 TDE1382 1422140 1422493 + ArsR family transcriptional regulator identified by match to protein family HMM PF01022 gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1382 TDE1383 TDE1383 TDE1383 1422441 1422911 + hypothetical protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1383 TDE1384 TDE1384 cadA cadA 1422905 1424836 + cadmium-translocating P-type ATPase identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525 gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1384 TDE1385 TDE1385 TDE1385 1424883 1424990 - hypothetical protein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1385 TDE1386 TDE1386 TDE1386 1425081 1426916 + methyl-accepting chemotaxis protein identified by similarity to GP:2911903%3B match to protein family HMM PF00015 gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1386 TDE1387 TDE1387 TDE1387 1426905 1427822 - RNA pseudouridylate synthase identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1387 TDE1388 TDE1388 TDE1388 1427896 1428372 + hypothetical protein identified by similarity to GP:3322420%3B match to protein family HMM PF02681 gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1388 TDE1389 TDE1389 TDE1389 1428378 1429835 + hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1389 TDE1390 TDE1390 TDE1390 1429832 1431118 + hypothetical protein identified by similarity to OMNI:TP0152 gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1390 TDE1391 TDE1391 TDE1391 1431115 1432149 + NQR2/RnfD/RnfE gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1391 TDE1392 TDE1392 TDE1392 1432142 1432633 + hypothetical protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1392 TDE1393 TDE1393 TDE1393 1432634 1433227 + hypothetical protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1393 TDE1394 TDE1394 TDE1394 1433224 1433763 + hypothetical protein gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1394 TDE1395 TDE1395 TDE1395 1433855 1435738 + glycosyl hydrolase identified by match to protein family HMM PF03065 gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1395 TDE1396 TDE1396 TDE1396 1435801 1436187 + hypothetical protein gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1396 TDE1397 TDE1397 TDE1397 1436154 1437320 + flagellar synthesis regulator FleN identified by similarity to OMNI:NTL03PA01455 gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1397 TDE1398 TDE1398 TDE1398 1437332 1439518 + hypothetical protein identified by similarity to OMNI:TM0735%3B match to protein family HMM PF03961 gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1398 TDE1399 TDE1399 lgt lgt 1439533 1440549 + prolipoprotein diacylglyceryl transferase transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1399 TDE1400 TDE1400 nadE nadE 1440542 1442494 + NAD synthetase catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1400 TDE1401 TDE1401 TDE1401 1442505 1443128 + DedA integral membrane protein identified by match to protein family HMM PF00597 gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1401 TDE1402 TDE1402 TDE1402 1443298 1444575 + hypothetical protein identified by similarity to GP:23325698 gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1402 TDE1403 TDE1403 TDE1403 1444590 1446593 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1403 TDE1404 TDE1404 TDE1404 1446598 1447917 - lipoprotein identified by similarity to SP:O83284 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1404 TDE1405 TDE1405 purQ purQ 1447952 1448764 - phosphoribosylformylglycinamidine synthetase I identified by similarity to SP:P12041%3B match to protein family HMM TIGR01737 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1405 TDE1406 TDE1406 TDE1406 1448767 1449468 - hypothetical protein gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1406 TDE1407 TDE1407 TDE1407 1449523 1450761 - hypothetical protein identified by similarity to OMNI:CT1906 gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1407 TDE1408 TDE1408 TDE1408 1450969 1451679 + flagellar filament outer layer protein FlaA gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1408 TDE1409 TDE1409 TDE1409 1451701 1452441 + flagellar filament outer layer protein FlaA identified by similarity to OMNI:TP0664 gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1409 TDE1410 TDE1410 TDE1410 1452564 1453229 - hypothetical protein identified by similarity to SP:O83671 gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1410 TDE1411 TDE1411 TDE1411 1453253 1453492 - hypothetical protein identified by similarity to SP:O83672 gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1411 TDE1412 TDE1412 TDE1412 1453602 1455326 + sodium/hydrogen exchanger identified by match to protein family HMM PF00571%3B match to protein family HMM PF00999 gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1412 TDE1413 TDE1413 TDE1413 1455650 1456951 + cytidylyltransferase/phosphoenolpyruvate phosphomutase identified by similarity to SP:P33182%3B match to protein family HMM PF01467%3B match to protein family HMM TIGR00125 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1413 TDE1414 TDE1414 TDE1414 1456952 1458088 + phosphonopyruvate decarboxylase identified by similarity to SP:O86938%3B match to protein family HMM PF02775 gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1414 TDE1415 TDE1415 TDE1415 1458081 1459931 + nucleotidyl transferase/aminotransferase%2C class V identified by match to protein family HMM PF00266 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1415 TDE1416 TDE1416 TDE1416 1459936 1460787 + ABC transporter permease identified by match to protein family HMM PF01061 gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1416 TDE1417 TDE1417 TDE1417 1460796 1462031 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1417 TDE1418 TDE1418 TDE1418 1462058 1463440 + hypothetical protein identified by similarity to GP:3724313 gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1418 TDE1419 TDE1419 TDE1419 1463476 1464513 + glycosyl transferase identified by match to protein family HMM PF00535 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1419 TDE1420 TDE1420 TDE1420 1464515 1465714 + hypothetical protein gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1420 TDE1421 TDE1421 TDE1421 1465772 1465870 + hypothetical protein gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1421 TDE1422 TDE1422 TDE1422 1465885 1466910 + glycosyl transferase identified by match to protein family HMM PF00535 gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1422 TDE1423 TDE1423 TDE1423 1466926 1467273 + hypothetical protein gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1423 TDE1424 TDE1424 TDE1424 1467275 1467691 + hypothetical protein identified by similarity to GP:5931978%3B match to protein family HMM PF05523 gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1424 TDE1425 TDE1425 TDE1425 1467688 1468695 + hypothetical protein identified by similarity to GP:21107883 gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1425 TDE1426 TDE1426 TDE1426 1468759 1469865 + aminotransferase identified by match to protein family HMM PF01041 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1426 TDE1427 TDE1427 TDE1427 1469853 1471250 + group 1 glycosyl transferase identified by match to protein family HMM PF00534 gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1427 TDE1428 TDE1428 TDE1428 1471247 1472587 + hypothetical protein gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1428 TDE1429 TDE1429 TDE1429 1472584 1473567 + glycosyl transferase identified by match to protein family HMM PF00535 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1429 TDE1430 TDE1430 TDE1430 1473570 1474571 + beta-1%2C4-galactosyltransferase identified by similarity to GP:2198543%3B match to protein family HMM PF00535 gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1430 TDE1431 TDE1431 TDE1431 1474534 1476030 + group 1 glycosyl transferase identified by match to protein family HMM PF00534 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1431 TDE1432 TDE1432 TDE1432 1476018 1477337 + hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1432 TDE1433 TDE1433 TDE1433 1477340 1478362 + glycosyl transferase identified by match to protein family HMM PF00535 gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1433 TDE1434 TDE1434 TDE1434 1478328 1478552 - hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1434 TDE1435 TDE1435 TDE1435 1478443 1479603 + hypothetical protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1435 TDE1436 TDE1436 TDE1436 1479600 1482350 + inner membrane protein identified by similarity to OMNI:BB0442%3B match to protein family HMM PF02096 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1436 TDE1437 TDE1437 TDE1437 1482372 1483346 + capsular polysaccharide biosynthesis protein identified by match to protein family HMM PF00535 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1437 TDE1438 TDE1438 TDE1438 1483380 1484450 + group 1 glycosyl transferase identified by match to protein family HMM PF00534 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1438 TDE1439 TDE1439 TDE1439 1484456 1485445 + epimerase/dehydratase identified by similarity to SP:Q56623 gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1439 TDE1440 TDE1440 rfbA rfbA 1485493 1486368 + glucose-1-phosphate thymidylyltransferase identified by similarity to SP:P26393%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01207 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1440 TDE1441 TDE1441 rfbB rfbB 1486387 1487475 + dTDP-glucose 4%2C6-dehydratase identified by similarity to SP:P37759%3B match to protein family HMM PF01370%3B match to protein family HMM TIGR01181 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1441 TDE1442 TDE1442 hisS hisS 1487556 1488902 + histidyl-tRNA synthetase catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1442 TDE1443 TDE1443 TDE1443 1488899 1489675 - RNA methyltransferase identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00186 gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1443 TDE1444 TDE1444 TDE1444 1489682 1491094 - metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1444 TDE1445 TDE1445 TDE1445 1491169 1492017 - hypothetical protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1445 TDE1446 TDE1446 TDE1446 1492110 1492739 + hypothetical protein gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1446 TDE1447 TDE1447 miaA miaA 1492752 1493648 + tRNA delta(2)-isopentenylpyrophosphate transferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1447 TDE1448 TDE1448 TDE1448 1493675 1494490 + glutamate racemase identified by match to protein family HMM PF01177 gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1448 TDE1449 TDE1449 yjeQ yjeQ 1494492 1495439 + GTPase YjeQ identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157 gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1449 TDE1450 TDE1450 TDE1450 1495460 1497916 + MutS family DNA mismatch repair protein identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069 gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1450 TDE1451 TDE1451 TDE1451 1497940 1499058 - hypothetical protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1451 TDE1452 TDE1452 TDE1452 1499031 1499180 + hypothetical protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1452 TDE1453 TDE1453 TDE1453 1499252 1501576 + alpha-galactosidase identified by similarity to SP:P27756%3B match to protein family HMM PF02065 gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1453 TDE1454 TDE1454 TDE1454 1501578 1502942 + sugar transporter identified by match to protein family HMM TIGR00792 gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1454 TDE1455 TDE1455 TDE1455 1503005 1503271 + prevent-host-death identified by match to protein family HMM TIGR01552 gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1455 TDE1456 TDE1456 TDE1456 1503402 1504829 - diguanylate cyclase identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1456 TDE1457 TDE1457 TDE1457 1504829 1506352 - hypothetical protein identified by similarity to SP:O83204 gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1457 TDE1458 TDE1458 TDE1458 1506349 1507878 - hypothetical protein identified by similarity to SP:O83207 gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1458 TDE1459 TDE1459 TDE1459 1507862 1508797 - hypothetical protein identified by similarity to SP:O83208 gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1459 TDE1460 TDE1460 TDE1460 1508797 1511181 - hypothetical protein identified by similarity to SP:O83209 gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1460 TDE1461 TDE1461 TDE1461 1511321 1511770 + septum formation initiator identified by match to protein family HMM PF04977 gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1461 TDE1462 TDE1462 TDE1462 1511745 1512299 + Sua5/YciO/YrdC/YwlC identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057 gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1462 TDE1463 TDE1463 TDE1463 1512296 1513162 - hypothetical protein identified by similarity to SP:O83213 gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1463 TDE1464 TDE1464 smpB smpB 1513166 1513630 - SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1464 TDE1465 TDE1465 TDE1465 1513704 1514405 + signal peptidase I identified by similarity to SP:P72365 gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1465 TDE1466 TDE1466 TDE1466 1514402 1515577 + oxygen-independent coproporphyrinogen III oxidase identified by similarity to SP:P54304%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00539 gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1466 TDE1467 TDE1467 TDE1467 1515581 1516741 - hypothetical protein identified by match to protein family HMM PF01966 gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1467 TDE1468 TDE1468 TDE1468 1516770 1517426 - glycoprotease identified by match to protein family HMM PF00814 gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1468 TDE1469 TDE1469 TDE1469 1517423 1517854 - hypothetical protein identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1469 TDE1470 TDE1470 TDE1470 1517856 1518116 - hypothetical protein identified by similarity to OMNI:TP0874 gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1470 TDE1471 TDE1471 TDE1471 1518235 1518837 - hypothetical protein identified by similarity to SP:O83843 gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1471 TDE1472 TDE1472 fliD fliD 1518847 1520805 - flagellar hook-associated protein FliD involved in flagellin assembly gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1472 TDE1473 TDE1473 TDE1473 1520850 1521221 - flagellin FlaG identified by similarity to GP:2384651%3B match to protein family HMM PF03646 gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1473 TDE1474 TDE1474 TDE1474 1521351 1521443 - hypothetical protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1474 TDE1475 TDE1475 TDE1475 1521424 1522281 - flagellar filament core protein identified by similarity to SP:P21990%3B match to protein family HMM PF00669%3B match to protein family HMM PF00700 gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1475 TDE1476 TDE1476 TDE1476 1522317 1522505 + hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1476 TDE1477 TDE1477 TDE1477 1522563 1523423 - flagellar filament core protein identified by similarity to SP:P21990%3B match to protein family HMM PF00669%3B match to protein family HMM PF00700 gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1477 TDE1478 TDE1478 TDE1478 1523565 1524107 - hypothetical protein identified by similarity to SP:O83911 gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1478 TDE1479 TDE1479 TDE1479 1524181 1525182 - DHH super%2C subfamily 1 identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272 gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1479 TDE1480 TDE1480 TDE1480 1525252 1525671 - hypothetical protein identified by similarity to SP:O83451 gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1480 TDE1481 TDE1481 TDE1481 1525797 1526933 + hypothetical protein identified by similarity to OMNI:CT0983 gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1481 TDE1482 TDE1482 TDE1482 1527036 1528793 + peptidase%2C M24 identified by match to protein family HMM PF00557 gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1482 TDE1483 TDE1483 TDE1483 1528903 1529127 + hypothetical protein identified by similarity to SP:O83756 gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1483 TDE1484 TDE1484 TDE1484 1529295 1529804 + hypothetical protein gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1484 TDE1485 TDE1485 TDE1485 1529837 1530442 + hypothetical protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1485 TDE1486 TDE1486 TDE1486 1530439 1530753 + hypothetical protein identified by similarity to OMNI:CT1182 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1486 TDE1487 TDE1487 TDE1487 1530845 1531588 + hypothetical protein identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1487 TDE1488 TDE1488 gap gap 1531694 1532743 - glyceraldehyde-3-phosphate dehydrogenase identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534 gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1488 TDE1489 TDE1489 TDE1489 1532820 1533662 - hypothetical protein gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1489 TDE1490 TDE1490 TDE1490 1533662 1534819 - hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1490 TDE1491 TDE1491 cheA cheA 1534949 1537354 + chemotaxis protein CheA identified by similarity to GP:1765973%3B match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895 gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1491 TDE1492 TDE1492 cheW-1 cheW-1 1537371 1538705 + chemotaxis protein CheW identified by similarity to OMNI:TP0364%3B match to protein family HMM PF01584%3B match to protein family HMM PF01739%3B match to protein family HMM PF03705 gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1492 TDE1493 TDE1493 cheX cheX 1538730 1539194 + chemotaxis protein CheX identified by similarity to OMNI:TP0365%3B match to protein family HMM PF04509 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1493 TDE1494 TDE1494 cheY cheY 1539216 1539656 + chemotaxis protein CheY identified by similarity to SP:P96126%3B match to protein family HMM PF00072 gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1494 TDE1495 TDE1495 TDE1495 1539686 1540306 - hypothetical protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1495 TDE1496 TDE1496 TDE1496 1540425 1543367 + chromosome partition protein SmC identified by similarity to OMNI:TP0367%3B match to protein family HMM PF02463%3B match to protein family HMM PF02483%3B match to protein family HMM TIGR01612 gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1496 TDE1497 TDE1497 TDE1497 1543348 1543764 + hypothetical protein identified by similarity to SP:O83383 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1497 TDE1498 TDE1498 TDE1498 1543809 1545314 + hypothetical protein identified by similarity to SP:O83384 gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1498 TDE1499 TDE1499 TDE1499 1545406 1546848 + adenylosuccinate lyase identified by similarity to SP:P12047%3B match to protein family HMM PF00206 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1499 TDE1500 TDE1500 TDE1500 1546853 1548160 - hypothetical protein identified by similarity to GP:22776271 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1500 TDE1501 TDE1501 ppdK ppdK 1548181 1550982 + pyruvate phosphate dikinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1501 TDE1502 TDE1502 aroH aroH 1551060 1551437 + chorismate mutase identified by similarity to SP:P19080%3B match to protein family HMM TIGR01796 gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1502 TDE1503 TDE1503 rho rho 1551807 1553453 + transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1503 TDE1504 TDE1504 rpmE rpmE 1553490 1553693 + 50S ribosomal protein L31 RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1504 TDE1505 TDE1505 TDE1505 1553754 1554197 + hypothetical protein gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1505 TDE1506 TDE1506 sdhA sdhA 1554242 1555132 - L-serine dehydratase%2C iron-sulfur-dependent subunit alpha identified by similarity to SP:P33073%3B match to protein family HMM PF03313%3B match to protein family HMM TIGR00718 gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1506 TDE1507 TDE1507 sdhB sdhB 1555152 1555814 - L-serine dehydratase%2C iron-sulfur-dependent subunit beta identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719 gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1507 TDE1508 TDE1508 TDE1508 1556116 1556511 + hypothetical protein gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1508 TDE1509 TDE1509 TDE1509 1556529 1557194 + lipoprotein releasing system%2C ATP-binding protein identified by similarity to SP:P75957%3B match to protein family HMM PF00005 gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1509 TDE1510 TDE1510 TDE1510 1557320 1558588 + hypothetical protein identified by similarity to GP:19714880%3B match to protein family HMM PF03239 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1510 TDE1511 TDE1511 TDE1511 1558628 1559254 + pathogen-specific surface antigen identified by similarity to SP:P19478 gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1511 TDE1512 TDE1512 TDE1512 1559343 1560611 + hypothetical protein identified by similarity to GP:23325657 gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1512 TDE1513 TDE1513 TDE1513 1560624 1560758 + hypothetical protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1513 TDE1514 TDE1514 TDE1514 1560792 1562069 + permease domain protein identified by match to protein family HMM PF02687 gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1514 TDE1515 TDE1515 TDE1515 1562118 1563239 + permease domain protein identified by match to protein family HMM PF02687 gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1515 TDE1516 TDE1516 TDE1516 1563267 1563959 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1516 TDE1517 TDE1517 TDE1517 1563956 1564405 + hypothetical protein identified by similarity to OMNI:NTL01FN1927 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1517 TDE1518 TDE1518 TDE1518 1564424 1565635 + permease identified by match to protein family HMM PF02687 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1518 TDE1519 TDE1519 TDE1519 1565741 1566412 + hypothetical protein identified by similarity to OMNI:TP1002 gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1519 TDE1520 TDE1520 TDE1520 1566491 1567336 + fumarate hydratase Catalyzes the reversible hydration of fumaric acid to yield I-malic acid gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1520 TDE1521 TDE1521 TDE1521 1567351 1567914 + fumarate hydratase Catalyzes the reversible hydration of fumaric acid to yield l-malic acid gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1521 TDE1522 TDE1522 citC citC 1567920 1568948 + citrate lyase ligase identified by match to protein family HMM TIGR00124%3B match to protein family HMM TIGR00125 gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1522 TDE1523 TDE1523 TDE1523 1568966 1570381 + citXG protein identified by similarity to SP:P44458 gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1523 TDE1524 TDE1524 TDE1524 1570432 1570524 + hypothetical protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1524 TDE1525 TDE1525 TDE1525 1570478 1570714 + hypothetical protein gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1525 TDE1526 TDE1526 TDE1526 1570705 1570947 + hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1526 TDE1527 TDE1527 TDE1527 1570944 1571855 + hypothetical protein gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1527 TDE1528 TDE1528 TDE1528 1571865 1573001 + hypothetical protein gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1528 TDE1529 TDE1529 TDE1529 1573004 1575127 + hypothetical protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1529 TDE1530 TDE1530 TDE1530 1575186 1575962 - hypothetical protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1530 TDE1531 TDE1531 TDE1531 1576091 1576669 + hypothetical protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1531 TDE1532 TDE1532 TDE1532 1576659 1577228 + hypothetical protein gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1532 TDE1533 TDE1533 TDE1533 1577254 1578717 + hypothetical protein identified by similarity to GP:3322740 gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1533 TDE1534 TDE1534 TDE1534 1578757 1579218 - hypothetical protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1534 TDE1535 TDE1535 TDE1535 1579227 1580030 - hypothetical protein identified by similarity to OMNI:BB0471 gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1535 TDE1536 TDE1536 TDE1536 1580034 1580558 - TPR identified by match to protein family HMM PF00515 gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1536 TDE1537 TDE1537 TDE1537 1580562 1581614 - polyprenyl synthetase identified by match to protein family HMM PF00348 gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1537 TDE1538 TDE1538 ligA ligA 1581708 1583645 + NAD-dependent DNA ligase identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575 gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1538 TDE1539 TDE1539 TDE1539 1583648 1584250 + hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1539 TDE1540 TDE1540 TDE1540 1584562 1585008 + hypothetical protein identified by similarity to SP:Q9ZMG1%3B match to protein family HMM PF03692 gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1540 TDE1541 TDE1541 TDE1541 1585038 1586000 + metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1541 TDE1542 TDE1542 TDE1542 1585997 1586188 + hypothetical protein identified by similarity to OMNI:TP0490 gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1542 TDE1543 TDE1543 TDE1543 1586208 1587230 + hypothetical protein identified by similarity to GP:3322780%3B match to protein family HMM PF02618%3B match to protein family HMM TIGR00247 gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1543 TDE1544 TDE1544 TDE1544 1587294 1588406 + mannosyltransferase identified by match to protein family HMM PF00534 gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1544 TDE1545 TDE1545 TDE1545 1588470 1589072 + phosphoribosyl transferase identified by match to protein family HMM PF00156 gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1545 TDE1546 TDE1546 TDE1546 1589069 1591264 + hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1546 TDE1547 TDE1547 rnhB rnhB 1591264 1591860 + ribonuclease HII identified by similarity to SP:P10442%3B match to protein family HMM PF01351 gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1547 TDE1548 TDE1548 TDE1548 1591975 1592262 + hypothetical protein identified by similarity to SP:Q98BM7%3B match to protein family HMM PF02575%3B match to protein family HMM TIGR00103 gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1548 TDE1549 TDE1549 recR recR 1592280 1592867 + recombination protein RecR involved in a recombinational process of DNA repair%2C independent of the recBC complex gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1549 TDE1550 TDE1550 TDE1550 1592887 1594569 + diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the formation of fructose 1%2C6-bisphosphate from fructose 6-phosphate and diphosphate gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1550 TDE1551 TDE1551 TDE1551 1594628 1595623 - lipoyltransferase and lipoate-protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1551 TDE1552 TDE1552 TDE1552 1595899 1596480 + hypothetical protein gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1552 TDE1553 TDE1553 TDE1553 1596496 1597158 + hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1553 TDE1554 TDE1554 TDE1554 1597145 1598161 + hypothetical protein gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1554 TDE1555 TDE1555 TDE1555 1598158 1598916 + hypothetical protein gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1555 TDE1556 TDE1556 TDE1556 1598927 1600129 + hypothetical protein identified by similarity to OMNI:NTL01YP0774 gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1556 TDE1557 TDE1557 TDE1557 1600126 1600830 + hypothetical protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1557 TDE1558 TDE1558 TDE1558 1600897 1610859 + YD repeat-containing protein identified by match to protein family HMM PF01839%3B match to protein family HMM PF05593%3B match to protein family HMM TIGR01612%3B match to protein family HMM TIGR01643 gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1558 TDE1559 TDE1559 TDE1559 1610863 1611471 + hypothetical protein gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1559 TDE1560 TDE1560 TDE1560 1611590 1614970 + YD repeat-containing protein identified by match to protein family HMM PF05593%3B match to protein family HMM TIGR01612%3B match to protein family HMM TIGR01643 gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1560 TDE1561 TDE1561 TDE1561 1614974 1615297 + hypothetical protein gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1561 TDE1562 TDE1562 TDE1562 1615388 1615705 + hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1562 TDE1563 TDE1563 TDE1563 1615833 1616573 + hypothetical protein gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1563 TDE1564 TDE1564 TDE1564 1616642 1616764 + hypothetical protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1564 TDE1565 TDE1565 TDE1565 1617033 1617482 + hypothetical protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1565 TDE1566 TDE1566 TDE1566 1617962 1619044 + hypothetical protein identified by similarity to GP:19915966 gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1566 TDE1567 TDE1567 TDE1567 1619052 1619651 + hypothetical protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1567 TDE1568 TDE1568 TDE1568 1619684 1619887 + hypothetical protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1568 TDE1569 TDE1569 TDE1569 1619925 1620035 + hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1569 TDE1570 TDE1570 TDE1570 1620202 1620666 + hypothetical protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1570 TDE1571 TDE1571 TDE1571 1620808 1620906 + hypothetical protein gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1571 TDE1572 TDE1572 TDE1572 1621003 1621572 + hypothetical protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1572 TDE1573 TDE1573 TDE1573 1621631 1621888 - DNA-damage-inducible protein J identified by similarity to SP:Q47150 gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1573 TDE1574 TDE1574 TDE1574 1621940 1622053 + hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1574 TDE1575 TDE1575 lipA lipA 1622043 1622915 + lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1575 TDE1576 TDE1576 miaB miaB 1622918 1624273 + (dimethylallyl)adenosine tRNA methylthiotransferase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1576 TDE1577 TDE1577 TDE1577 1624649 1625506 + lipoprotein identified by similarity to SP:O83908 gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1577 TDE1578 TDE1578 TDE1578 1625510 1626169 + phosphoesterase identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040 gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1578 TDE1579 TDE1579 TDE1579 1626164 1627579 - fibronectin/fibrinogen-binding protein%2C internal deletion identified by similarity to GP:19110786%3B match to protein family HMM PF05670%3B match to protein family HMM PF05833 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1579 TDE1580 TDE1580 TDE1580 1627579 1629816 - hypothetical protein identified by similarity to SP:O83494 gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1580 TDE1581 TDE1581 TDE1581 1629818 1630336 - hypothetical protein identified by similarity to SP:O83493 gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1581 TDE1582 TDE1582 glgA glgA 1630374 1631849 - glycogen synthase identified by similarity to SP:P39125%3B match to protein family HMM PF00534 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1582 TDE1583 TDE1583 TDE1583 1631948 1632067 + hypothetical protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1583 TDE1584 TDE1584 TDE1584 1632165 1632914 + lipoprotein identified by match to protein family HMM PF04402 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1584 TDE1585 TDE1585 TDE1585 1633022 1633489 - hypothetical protein identified by similarity to OMNI:NTL01FN0935 gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1585 TDE1586 TDE1586 TDE1586 1633528 1634010 - hypothetical protein identified by similarity to GP:19713817 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1586 TDE1587 TDE1587 aspS aspS 1634173 1635945 + aspartyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1587 TDE1588 TDE1588 TDE1588 1635953 1637026 + tryptophanyl-tRNA synthetase II catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1588 TDE1589 TDE1589 cheW-2 cheW-2 1637144 1637650 + purine-binding chemotaxis protein identified by similarity to OMNI:TP0364%3B match to protein family HMM PF01584 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1589 TDE1590 TDE1590 TDE1590 1637656 1638681 + aminotransferase identified by match to protein family HMM PF01041 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1590 TDE1591 TDE1591 TDE1591 1638722 1639576 + inorganic polyphosphate/ATP-NAD kinase identified by match to protein family HMM PF01513 gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1591 TDE1592 TDE1592 TDE1592 1639631 1641283 + ABC transporter ATP-binding protein identified by similarity to SP:P75790%3B match to protein family HMM PF00005 gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1592 TDE1593 TDE1593 TDE1593 1641299 1643089 - Fe-hydrogenase identified by similarity to GP:488597%3B match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1593 TDE1594 TDE1594 TDE1594 1643083 1644912 - glutamate synthase (NADPH) small subunit unknown function gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1594 TDE1595 TDE1595 cbiD cbiD 1645038 1646129 - cobalt-precorrin-6A synthase Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1595 TDE1596 TDE1596 TDE1596 1646189 1646770 - hypothetical protein gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1596 TDE1597 TDE1597 TDE1597 1646785 1647492 - transporter gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1597 TDE1598 TDE1598 TDE1598 1647492 1649000 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1598 TDE1599 TDE1599 TDE1599 1649010 1650734 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1599 TDE1600 TDE1600 TDE1600 1650735 1652486 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1600 TDE1601 TDE1601 TDE1601 1652479 1653126 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1601 TDE1602 TDE1602 TDE1602 1653237 1653347 - hypothetical protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1602 TDE1603 TDE1603 TDE1603 1653501 1654946 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1603 TDE1604 TDE1604 TDE1604 1654937 1655623 - ABC transporter permease gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1604 TDE1605 TDE1605 TDE1605 1655623 1656201 - hypothetical protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1605 TDE1606 TDE1606 TDE1606 1656271 1656948 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1606 TDE1607 TDE1607 TDE1607 1657097 1657621 - MutT/nudix identified by match to protein family HMM PF00293 gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1607 TDE1608 TDE1608 TDE1608 1657710 1658429 + hypothetical protein identified by similarity to OMNI:CT2121 gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1608 TDE1609 TDE1609 TDE1609 1658466 1659287 + hypothetical protein identified by similarity to GP:15023617 gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1609 TDE1610 TDE1610 TDE1610 1659284 1659586 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1610 TDE1611 TDE1611 TDE1611 1659841 1660494 + hypothetical protein identified by similarity to GP:6968687 gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1611 TDE1612 TDE1612 TDE1612 1660689 1661750 + phosphoribosyl transferase identified by similarity to SP:P39149%3B match to protein family HMM PF00156 gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1612 TDE1613 TDE1613 TDE1613 1661765 1662379 + hypothetical protein identified by similarity to SP:O83463 gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1613 TDE1614 TDE1614 TDE1614 1662385 1663377 - hypothetical protein identified by similarity to SP:O83733 gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1614 TDE1615 TDE1615 TDE1615 1663397 1663798 - hypothetical protein identified by similarity to SP:O83734 gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1615 TDE1616 TDE1616 hprA hprA 1663845 1664813 - glycerate dehydrogenase Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1616 TDE1617 TDE1617 TDE1617 1664806 1664949 - hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1617 TDE1618 TDE1618 TDE1618 1665440 1666276 + hypothetical protein identified by similarity to OMNI:HP1437 gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1618 TDE1619 TDE1619 TDE1619 1666269 1666658 + hypothetical protein identified by similarity to OMNI:NTL01HP01321 gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1619 TDE1620 TDE1620 TDE1620 1667049 1669052 - hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1620 TDE1621 TDE1621 TDE1621 1669043 1670833 - hypothetical protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1621 TDE1622 TDE1622 TDE1622 1670910 1671071 - hypothetical protein identified by similarity to GP:7380431 gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1622 TDE1623 TDE1623 TDE1623 1671108 1672070 - hypothetical protein identified by similarity to OMNI:NTL01CJ01528%3B match to protein family HMM PF04373 gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1623 TDE1624 TDE1624 gcvP2 gcvP2 1672161 1673609 - glycine dehydrogenase subunit 2 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 1 to form the P protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1624 TDE1625 TDE1625 gcvP1 gcvP1 1673609 1674913 - glycine dehydrogenase subunit 1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 2 to form the P protein gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1625 TDE1626 TDE1626 gcvH gcvH 1675001 1675369 - glycine cleavage system H protein identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527 gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1626 TDE1627 TDE1627 gcvT gcvT 1675428 1676501 - glycine cleavage system T protein identified by match to protein family HMM PF01571%3B match to protein family HMM TIGR00528 gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1627 TDE1628 TDE1628 TDE1628 1676569 1676946 - hypothetical protein gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1628 TDE1629 TDE1629 lpdA lpdA 1677243 1678604 - dihydrolipoamide dehydrogenase identified by similarity to GP:472330%3B match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM TIGR01350 gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1629 TDE1630 TDE1630 TDE1630 1678732 1679772 - hypothetical protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1630 TDE1631 TDE1631 citF citF 1680150 1681646 - citrate lyase subunit alpha identified by similarity to SP:P75726%3B match to protein family HMM TIGR01584 gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1631 TDE1632 TDE1632 citE citE 1681659 1682528 - citrate lyase subunit beta identified by similarity to SP:O53078 gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1632 TDE1633 TDE1633 citD citD 1682518 1682781 - citrate lyase subunit gamma acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1633 TDE1634 TDE1634 TDE1634 1682875 1683153 - hypothetical protein identified by similarity to OMNI:NTL01XF00533 gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1634 TDE1635 TDE1635 TDE1635 1683122 1683409 - hypothetical protein identified by similarity to OMNI:NTL01XF00534%3B match to protein family HMM PF04365 gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1635 TDE1636 TDE1636 TDE1636 1683607 1686045 - surface antigen identified by similarity to GP:217166 gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1636 TDE1637 TDE1637 polA polA 1686212 1689022 + DNA polymerase I identified by similarity to SP:P00582%3B match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF01612%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593%3B match to protein family HMM TIGR01612 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1637 TDE1638 TDE1638 TDE1638 1689022 1689693 + dephospho-CoA kinase identified by similarity to SP:O83319%3B match to protein family HMM PF01121 gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1638 TDE1639 TDE1639 TDE1639 1689703 1690533 + sporulation repeat-containing protein identified by match to protein family HMM PF05036 gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1639 TDE1640 TDE1640 TDE1640 1690536 1692017 + 3-dehydroquinate dehydratase identified by match to protein family HMM PF01487%3B match to protein family HMM PF01488 gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1640 TDE1641 TDE1641 rpiA rpiA 1692017 1692736 + ribose-5-phosphate isomerase A Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1641 TDE1642 TDE1642 TDE1642 1692861 1693577 - hypothetical protein identified by similarity to SP:O83751 gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1642 TDE1643 TDE1643 TDE1643 1693649 1694641 - hypothetical protein identified by similarity to OMNI:TP0307%3B match to protein family HMM PF03793 gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1643 TDE1644 TDE1644 fmt fmt 1694668 1695636 - methionyl-tRNA formyltransferase identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460 gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1644 TDE1645 TDE1645 def def 1695633 1696142 - polypeptide deformylase identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079 gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1645 TDE1646 TDE1646 TDE1646 1696139 1696270 - hypothetical protein gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1646 TDE1647 TDE1647 TDE1647 1696245 1696592 - DNA-binding protein identified by match to protein family HMM PF01381 gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1647 TDE1648 TDE1648 TDE1648 1696576 1696830 - hypothetical protein identified by similarity to OMNI:NTL01RS3277 gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1648 TDE1649 TDE1649 TDE1649 1696880 1697527 - hypothetical protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1649 TDE1650 TDE1650 TDE1650 1697467 1698207 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1650 TDE1651 TDE1651 TDE1651 1698211 1698822 - BioY identified by match to protein family HMM PF02632 gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1651 TDE1652 TDE1652 TDE1652 1698947 1700614 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1652 TDE1653 TDE1653 TDE1653 1700601 1702302 - ABC transporter ATP-binding protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P27299 gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1653 TDE1654 TDE1654 TDE1654 1702359 1704971 + ATP-dependent helicase HrpA identified by similarity to SP:P43329%3B match to protein family HMM PF00271%3B match to protein family HMM PF04408 gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1654 TDE1655 TDE1655 TDE1655 1705098 1705628 + hypothetical protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1655 TDE1656 TDE1656 TDE1656 1705649 1707310 - lipoprotein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1656 TDE1657 TDE1657 nusB nusB 1707320 1707730 - transcription antitermination protein NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1657 TDE1658 TDE1658 TDE1658 1707745 1708821 - basic membrane protein identified by similarity to SP:P29725 gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1658 TDE1659 TDE1659 alaS alaS 1708921 1710723 - alanyl-tRNA synthetase catalyzes a two-step reaction%2C first charging an alanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1659 TDE1660 TDE1660 TDE1660 1710800 1715356 - leucine rich repeat identified by match to protein family HMM PF00560%3B match to protein family HMM TIGR01612 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1660 TDE1661 TDE1661 TDE1661 1715542 1715970 + hypothetical protein identified by similarity to OMNI:CT1335 gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1661 TDE1662 TDE1662 dnaB dnaB 1716038 1717375 + replicative DNA helicase identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665 gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1662 TDE1663 TDE1663 TDE1663 1717459 1717962 + OmpA protein identified by similarity to SP:P38369%3B match to protein family HMM PF00691 gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1663 TDE1664 TDE1664 TDE1664 1718002 1719042 + hypothetical protein identified by similarity to OMNI:NTL02SC6422 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1664 TDE1665 TDE1665 TDE1665 1718998 1719219 - hypothetical protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1665 TDE1666 TDE1666 TDE1666 1719386 1720081 + hypothetical protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1666 TDE1667 TDE1667 mtnA mtnA 1720083 1721141 - methylthioribose-1-phosphate isomerase isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate%3B involved in methionine salvage pathway gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1667 TDE1668 TDE1668 TDE1668 1721358 1722734 + amino acid permease identified by match to protein family HMM PF00324 gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1668 TDE1669 TDE1669 TDE1669 1722745 1723938 + hemolysin identified by similarity to GP:9955069 gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1669 TDE1670 TDE1670 TDE1670 1724003 1724551 - MarR family transcriptional regulator identified by match to protein family HMM PF01047 gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1670 TDE1671 TDE1671 tig tig 1725052 1726407 + trigger factor Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1671 TDE1672 TDE1672 clpP clpP 1726432 1727025 + ATP-dependent Clp protease proteolytic subunit hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1672 TDE1673 TDE1673 clpX clpX 1727018 1728265 + ATP-dependent protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1673 TDE1674 TDE1674 TDE1674 1728322 1728681 - hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1674 TDE1675 TDE1675 rplI rplI 1728733 1729332 - 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1675 TDE1676 TDE1676 rpsR rpsR 1729463 1729732 - 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1676 TDE1677 TDE1677 ssb ssb 1729773 1730279 - single-strand binding protein identified by similarity to SP:P37455%3B match to protein family HMM PF00436%3B match to protein family HMM TIGR00621 gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1677 TDE1678 TDE1678 rpsF rpsF 1730292 1730573 - 30S ribosomal protein S6 binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1678 TDE1679 TDE1679 atpK atpK 1730717 1731139 - V-type ATP synthase subunit K produces ATP from ADP in the presence of a proton gradient across the membrane%3B the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1679 TDE1680 TDE1680 TDE1680 1731155 1733016 - V-type ATPase%2C I subunit%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:O51118 gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1680 TDE1681 TDE1681 atpD atpD 1733013 1733627 - V-type ATP synthase subunit D produces ATP from ADP in the presence of a proton gradient across the membrane%3B the D subunit is part of the catalytic core of the ATP synthase complex gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1681 TDE1682 TDE1682 atpB atpB 1733638 1734933 - V-type ATP synthase subunit B produces ATP from ADP in the presence of a proton gradient across the membrane%3B the B subunit is part of the catalytic core of the ATP synthase complex gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1682 TDE1683 TDE1683 atpA atpA 1734935 1736704 - V-type ATP synthase subunit A produces ATP from ADP in the presence of a proton gradient across the membrane%3B the A subunit is part of the catalytic core of the ATP synthase complex gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1683 TDE1684 TDE1684 apt apt 1736845 1737417 - adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1684 TDE1685 TDE1685 TDE1685 1737442 1740405 - diguanylate cyclase identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254%3B match to protein family HMM TIGR01612 gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1685 TDE1686 TDE1686 aroA aroA 1740504 1741853 - 3-phosphoshikimate 1-carboxyvinyltransferase identified by similarity to SP:P07638%3B match to protein family HMM PF00275%3B match to protein family HMM TIGR01356 gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1686 TDE1687 TDE1687 TDE1687 1741850 1744132 - hypothetical protein identified by similarity to SP:O83890%3B match to protein family HMM PF00515 gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1687 TDE1688 TDE1688 TDE1688 1744181 1745881 - hypothetical protein identified by similarity to OMNI:NTL01TT0789 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1688 TDE1689 TDE1689 TDE1689 1745897 1746655 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1689 TDE1690 TDE1690 TDE1690 1746673 1747290 - hypothetical protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1690 TDE1691 TDE1691 TDE1691 1747497 1748363 - hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1691 TDE1692 TDE1692 TDE1692 1748433 1748531 + hypothetical protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1692 TDE1693 TDE1693 TDE1693 1748528 1749316 - hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1693 TDE1694 TDE1694 TDE1694 1749313 1749456 - hypothetical protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1694 TDE1695 TDE1695 TDE1695 1749588 1754090 - CoA-substrate-specific enzyme activase identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241%3B match to protein family HMM TIGR01612 gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1695 TDE1696 TDE1696 TDE1696 1754110 1755591 - hypothetical protein identified by similarity to OMNI:NTL01SMB00827 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1696 TDE1697 TDE1697 gpmA gpmA 1755606 1756349 - phosphoglyceromutase 2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1697 TDE1698 TDE1698 TDE1698 1756426 1757274 - serine/threonine protein phosphatase identified by match to protein family HMM PF00149 gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1698 TDE1699 TDE1699 TDE1699 1757276 1758010 - hypothetical protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1699 TDE1700 TDE1700 TDE1700 1758180 1758287 + hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1700 TDE1701 TDE1701 TDE1701 1758280 1759407 + hypothetical protein gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1701 TDE1702 TDE1702 TDE1702 1759500 1760057 + hypothetical protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1702 TDE1703 TDE1703 TDE1703 1760123 1760698 + hypothetical protein gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1703 TDE1704 TDE1704 TDE1704 1760728 1761264 + hypothetical protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1704 TDE1705 TDE1705 TDE1705 1761277 1762215 + hypothetical protein gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1705 TDE1706 TDE1706 cinA cinA 1762265 1762843 - competence/damage-inducible protein CinA identified by similarity to SP:P46323%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00199 gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1706 TDE1707 TDE1707 TDE1707 1762865 1763281 - hypothetical protein identified by similarity to OMNI:TP0253%3B match to protein family HMM PF04519 gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1707 TDE1708 TDE1708 cutE-1 cutE-1 1763278 1764912 - apolipoprotein N-acyltransferase identified by match to protein family HMM PF00795%3B match to protein family HMM TIGR00546 gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1708 TDE1709 TDE1709 TDE1709 1764909 1765229 - HU family DNA-binding protein identified by match to protein family HMM PF00216 gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1709 TDE1710 TDE1710 rpsT rpsT 1765306 1765575 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1710 TDE1711 TDE1711 TDE1711 1765642 1766808 - RelA/SpoT identified by match to protein family HMM PF00515%3B match to protein family HMM PF04607 gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1711 TDE1712 TDE1712 flaA flaA 1766956 1768005 - flagellar filament outer layer protein identified by similarity to SP:P18193%3B match to protein family HMM PF04620 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1712 TDE1713 TDE1713 TDE1713 1768100 1768558 - hypothetical protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1713 TDE1714 TDE1714 TDE1714 1768573 1769586 - N-acetylmuramoyl-L-alanine amidase identified by match to protein family HMM PF01520 gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1714 TDE1715 TDE1715 pgk pgk 1769593 1770852 - phosphoglycerate kinase Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1715 TDE1716 TDE1716 TDE1716 1770941 1771318 - glyoxalase identified by match to protein family HMM PF00903 gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1716 TDE1717 TDE1717 TDE1717 1771571 1772221 + hypothetical protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1717 TDE1718 TDE1718 guaA guaA 1772300 1773871 + GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1718 TDE1719 TDE1719 TDE1719 1774169 1774606 + MarR family transcriptional regulator identified by similarity to OMNI:NTL01FN0480%3B match to protein family HMM PF01047 gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1719 TDE1720 TDE1720 TDE1720 1774603 1775292 + radical SAM protein identified by match to protein family HMM PF04055 gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1720 TDE1721 TDE1721 TDE1721 1775280 1776188 + radical SAM protein identified by match to protein family HMM PF04055 gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1721 TDE1722 TDE1722 TDE1722 1776225 1776578 + hypothetical protein gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1722 TDE1723 TDE1723 TDE1723 1776775 1777839 + hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1723 TDE1724 TDE1724 TDE1724 1777901 1778431 + hypothetical protein gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1724 TDE1725 TDE1725 TDE1725 1778483 1779367 - hypothetical protein identified by similarity to SP:O83789 gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1725 TDE1726 TDE1726 TDE1726 1779686 1780828 + polyA polymerase identified by match to protein family HMM PF01743%3B match to protein family HMM TIGR01942 gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1726 TDE1727 TDE1727 TDE1727 1780864 1781280 - hypothetical protein identified by similarity to OMNI:NTL01TT0279%3B match to protein family HMM PF02566 gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1727 TDE1728 TDE1728 TDE1728 1781306 1783324 - hypothetical protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1728 TDE1729 TDE1729 TDE1729 1783379 1783846 - glutathione peroxidase Selenoprotein.identified by similarity to SP:O59858%3B match to protein family HMM PF00255 gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1729 TDE1730 TDE1730 TDE1730 1783833 1785635 - glycosyl hydrolase identified by match to protein family HMM PF00703%3B match to protein family HMM PF02837 gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1730 TDE1731 TDE1731 TDE1731 1785622 1787025 - hypothetical protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1731 TDE1732 TDE1732 TDE1732 1787170 1788006 + hypothetical protein identified by similarity to OMNI:TP0843%3B match to protein family HMM PF00226 gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1732 TDE1733 TDE1733 map map 1787993 1788739 + methionine aminopeptidase identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500 gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1733 TDE1734 TDE1734 xth xth 1788753 1789523 + exodeoxyribonuclease III identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633 gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1734 TDE1735 TDE1735 TDE1735 1789942 1790058 + hypothetical protein gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1735 TDE1736 TDE1736 TDE1736 1790048 1790218 + ferredoxin%2C 2(4Fe-4S) identified by similarity to SP:P00198%3B match to protein family HMM PF00037 gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1736 TDE1737 TDE1737 TDE1737 1790273 1790689 + hypothetical protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1737 TDE1738 TDE1738 TDE1738 1790676 1791587 + M23/M37 peptidase identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1738 TDE1739 TDE1739 TDE1739 1791653 1792717 + femAB identified by match to protein family HMM PF02388 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1739 TDE1740 TDE1740 TDE1740 1792720 1792875 - hypothetical protein gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1740 TDE1741 TDE1741 TDE1741 1792932 1795472 + penicillin-binding protein identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1741 TDE1742 TDE1742 TDE1742 1795743 1797668 - AMP-binding protein identified by match to protein family HMM PF00501 gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1742 TDE1743 TDE1743 TDE1743 1798030 1798593 - chromate transporter identified by similarity to OMNI:NTL03CP2248%3B match to protein family HMM PF02417 gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1743 TDE1744 TDE1744 TDE1744 1798593 1799180 - chromate transporter identified by similarity to GP:4584202%3B match to protein family HMM PF02417 gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1744 TDE1745 TDE1745 TDE1745 1799205 1799564 - hypothetical protein identified by similarity to OMNI:TM0147%3B match to protein family HMM PF02410 gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1745 TDE1746 TDE1746 TDE1746 1799564 1800805 - hypothetical protein identified by similarity to GP:3323044 gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1746 TDE1747 TDE1747 nadD nadD 1800802 1802025 - nicotinate-nucleotide adenylyltransferase catalyzes the reversible adenylation of nicotinate mononucleotide to nicotinic acid adenine dinucleotide gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1747 TDE1748 TDE1748 obgE obgE 1802022 1803170 - GTPase ObgE essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1748 TDE1749 TDE1749 rpmA rpmA 1803248 1803499 - 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1749 TDE1750 TDE1750 TDE1750 1803529 1803915 - hypothetical protein identified by similarity to OMNI:TP0744%3B match to protein family HMM PF04327 gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1750 TDE1751 TDE1751 rplU rplU 1803921 1804232 - 50S ribosomal protein L21 identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061 gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1751 TDE1752 TDE1752 TDE1752 1804412 1805488 - ISTde2%2C transposase identified by similarity to GP:15146033%3B match to protein family HMM PF00665%3B match to protein family HMM TIGR01199 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1752 TDE1753 TDE1753 galE galE 1805611 1806630 - UDP-glucose 4-epimerase identified by similarity to SP:P55180%3B match to protein family HMM PF01370%3B match to protein family HMM TIGR01179 gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1753 TDE1754 TDE1754 TDE1754 1806727 1807113 - desulfoferrodoxin/neelaredoxin identified by match to protein family HMM PF01880%3B match to protein family HMM TIGR00332 gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1754 TDE1755 TDE1755 TDE1755 1807134 1807247 + hypothetical protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1755 TDE1756 TDE1756 TDE1756 1807433 1807900 - hypothetical protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1756 TDE1757 TDE1757 TDE1757 1807872 1808030 + hypothetical protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1757 TDE1758 TDE1758 TDE1758 1808070 1808654 - hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1758 TDE1759 TDE1759 TDE1759 1808679 1809254 - hypothetical protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1759 TDE1760 TDE1760 TDE1760 1809293 1809958 - hypothetical protein identified by match to protein family HMM PF01966 gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1760 TDE1761 TDE1761 TDE1761 1809970 1810260 - hypothetical protein identified by similarity to OMNI:DR0234 gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1761 TDE1762 TDE1762 TDE1762 1810275 1810994 - HAD superfamily hydrolase identified by match to protein family HMM PF00702 gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1762 TDE1763 TDE1763 TDE1763 1810966 1811295 - hypothetical protein identified by similarity to GP:15023609 gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1763 TDE1764 TDE1764 TDE1764 1811317 1811670 - hypothetical protein identified by similarity to OMNI:NTL01FN1100 gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1764 TDE1765 TDE1765 TDE1765 1811663 1811968 - hypothetical protein gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1765 TDE1766 TDE1766 TDE1766 1812365 1812823 - hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1766 TDE1767 TDE1767 TDE1767 1813016 1813657 - hypothetical protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1767 TDE1768 TDE1768 TDE1768 1813759 1814037 - hypothetical protein gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1768 TDE1769 TDE1769 TDE1769 1814039 1814467 - hypothetical protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1769 TDE1770 TDE1770 TDE1770 1814376 1814528 + hypothetical protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1770 TDE1771 TDE1771 TDE1771 1814669 1815448 - hypothetical protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1771 TDE1772 TDE1772 TDE1772 1815533 1815907 - hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1772 TDE1773 TDE1773 TDE1773 1816499 1817191 - hypothetical protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1773 TDE1774 TDE1774 TDE1774 1817590 1817979 - hypothetical protein identified by similarity to GP:15025485 gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1774 TDE1775 TDE1775 TDE1775 1818160 1818267 - hypothetical protein gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1775 TDE1776 TDE1776 TDE1776 1818504 1819322 - hypothetical protein gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1776 TDE1777 TDE1777 TDE1777 1820046 1820483 - hypothetical protein gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1777 TDE1778 TDE1778 TDE1778 1820552 1820668 - hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1778 TDE1779 TDE1779 TDE1779 1820671 1822086 - hypothetical protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1779 TDE1780 TDE1780 TDE1780 1822273 1822398 - hypothetical protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1780 TDE1781 TDE1781 TDE1781 1822568 1823350 - hypothetical protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1781 TDE1782 TDE1782 TDE1782 1823394 1823507 - hypothetical protein gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1782 TDE1783 TDE1783 TDE1783 1823528 1823695 - hypothetical protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1783 TDE1784 TDE1784 TDE1784 1823671 1824513 - AraC family transcriptional regulator identified by match to protein family HMM PF00165 gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1784 TDE1785 TDE1785 TDE1785 1825132 1825254 + hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1785 TDE1786 TDE1786 TDE1786 1825195 1826238 - hypothetical protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1786 TDE1787 TDE1787 TDE1787 1826468 1826725 - hypothetical protein identified by similarity to OMNI:NTL01RC0477 gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1787 TDE1788 TDE1788 TDE1788 1826718 1827005 - hypothetical protein identified by similarity to OMNI:NTL01RC0476 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1788 TDE1789 TDE1789 TDE1789 1827428 1827703 - hypothetical protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1789 TDE1790 TDE1790 TDE1790 1827711 1828097 - hypothetical protein gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1790 TDE1791 TDE1791 TDE1791 1828398 1828865 - hypothetical protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1791 TDE1792 TDE1792 TDE1792 1829001 1829885 - hypothetical protein gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1792 TDE1793 TDE1793 TDE1793 1830047 1830934 - carbon-nitrogen family hydrolase identified by match to protein family HMM PF00795 gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1793 TDE1794 TDE1794 TDE1794 1831105 1833048 - hypothetical protein gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1794 TDE1795 TDE1795 TDE1795 1833153 1834763 - funZ protein identified by similarity to GP:3139107 gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1795 TDE1796 TDE1796 TDE1796 1834856 1835605 - hypothetical protein identified by similarity to OMNI:NTL01SS01274%3B match to protein family HMM PF04402 gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1796 TDE1797 TDE1797 TDE1797 1835745 1836362 - hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1797 TDE1798 TDE1798 TDE1798 1836551 1836766 - hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1798 TDE1799 TDE1799 TDE1799 1836779 1837354 - hypothetical protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1799 TDE1800 TDE1800 TDE1800 1837517 1837774 - hypothetical protein identified by similarity to OMNI:NTL01RC0477 gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1800 TDE1801 TDE1801 TDE1801 1837764 1838054 - hypothetical protein identified by similarity to OMNI:NTL01RC0476 gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1801 TDE1802 TDE1802 TDE1802 1838070 1838198 - hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1802 TDE1803 TDE1803 TDE1803 1838485 1839360 - hypothetical protein identified by similarity to GP:6249475 gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1803 TDE1804 TDE1804 TDE1804 1839566 1842112 - hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1804 TDE1805 TDE1805 TDE1805 1842125 1842946 - radical SAM protein identified by match to protein family HMM PF04055 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1805 TDE1806 TDE1806 TDE1806 1843280 1843552 - hypothetical protein identified by similarity to OMNI:BR0974 gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1806 TDE1807 TDE1807 TDE1807 1843524 1843856 - hypothetical protein identified by similarity to GP:12667177%3B match to protein family HMM PF04365 gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1807 TDE1808 TDE1808 TDE1808 1844174 1845139 - hypothetical protein gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1808 TDE1809 TDE1809 TDE1809 1845305 1845403 - hypothetical protein gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1809 TDE1810 TDE1810 TDE1810 1846014 1846508 - hypothetical protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1810 TDE1811 TDE1811 TDE1811 1846863 1847573 - hypothetical protein gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1811 TDE1812 TDE1812 TDE1812 1847670 1847945 - hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1812 TDE1813 TDE1813 TDE1813 1847953 1848339 - hypothetical protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1813 TDE1814 TDE1814 TDE1814 1848519 1849403 - hypothetical protein gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1814 TDE1815 TDE1815 TDE1815 1849548 1850234 - hypothetical protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1815 TDE1816 TDE1816 TDE1816 1850567 1851763 - hypothetical protein identified by similarity to GP:18148891 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1816 TDE1817 TDE1817 TDE1817 1851856 1852689 - hypothetical protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1817 TDE1818 TDE1818 TDE1818 1852922 1853881 - hypothetical protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1818 TDE1819 TDE1819 TDE1819 1854125 1854241 - hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1819 TDE1820 TDE1820 TDE1820 1854387 1854782 - hypothetical protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1820 TDE1821 TDE1821 TDE1821 1854905 1855477 - hypothetical protein gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1821 TDE1822 TDE1822 TDE1822 1855569 1856012 - hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1822 TDE1823 TDE1823 TDE1823 1856691 1857080 - hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1823 TDE1824 TDE1824 TDE1824 1857151 1857258 + hypothetical protein gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1824 TDE1825 TDE1825 TDE1825 1857340 1858434 - hypothetical protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1825 TDE1826 TDE1826 TDE1826 1858651 1859871 - hypothetical protein gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1826 TDE1827 TDE1827 TDE1827 1860033 1860920 - carbon-nitrogen family hydrolase identified by match to protein family HMM PF00795 gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1827 TDE1828 TDE1828 TDE1828 1861024 1861842 - hypothetical protein gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1828 TDE1829 TDE1829 TDE1829 1862457 1863737 - hypothetical protein gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1829 TDE1830 TDE1830 TDE1830 1863723 1863845 + hypothetical protein gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1830 TDE1831 TDE1831 TDE1831 1864505 1865122 - hypothetical protein gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1831 TDE1832 TDE1832 TDE1832 1865262 1866011 - hypothetical protein identified by similarity to OMNI:NTL01SS01274%3B match to protein family HMM PF04402 gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1832 TDE1833 TDE1833 TDE1833 1866367 1866804 - hypothetical protein gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1833 TDE1834 TDE1834 TDE1834 1866873 1866989 - hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1834 TDE1835 TDE1835 TDE1835 1866992 1868407 - hypothetical protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1835 TDE1836 TDE1836 TDE1836 1868604 1869533 - hypothetical protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1836 TDE1837 TDE1837 TDE1837 1869632 1870036 - hypothetical protein identified by similarity to OMNI:SAG1835 gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1837 TDE1838 TDE1838 TDE1838 1870058 1870255 - hypothetical protein identified by similarity to OMNI:NTL03CPA0027 gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1838 TDE1839 TDE1839 TDE1839 1870481 1871311 - hypothetical protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1839 TDE1840 TDE1840 TDE1840 1871414 1871671 - hypothetical protein identified by similarity to OMNI:NTL01RC0477 gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1840 TDE1841 TDE1841 TDE1841 1871661 1871951 - hypothetical protein identified by similarity to OMNI:NTL01RC0476 gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1841 TDE1842 TDE1842 TDE1842 1871967 1872095 - hypothetical protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1842 TDE1843 TDE1843 TDE1843 1872289 1873095 - hypothetical protein gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1843 TDE1844 TDE1844 TDE1844 1873287 1874294 - DNA integrase identified by similarity to GP:15822601%3B match to protein family HMM PF00589%3B match to protein family HMM PF02899 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1844 TDE1845 TDE1845 TDE1845 1874891 1875259 - hypothetical protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1845 TDE1846 TDE1846 TDE1846 1875259 1875516 - hypothetical protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1846 TDE1847 TDE1847 TDE1847 1875804 1875905 + hypothetical protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1847 TDE1848 TDE1848 TDE1848 1875987 1877444 - hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1848 TDE1849 TDE1849 TDE1849 1877446 1878213 - hypothetical protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1849 TDE1850 TDE1850 TDE1850 1878317 1879651 - ABC transporter permease identified by match to protein family HMM PF02687 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1850 TDE1851 TDE1851 TDE1851 1879667 1881187 - ABC transporter permease identified by match to protein family HMM PF02687 gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1851 TDE1852 TDE1852 TDE1852 1881204 1881956 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1852 TDE1853 TDE1853 TDE1853 1882056 1882172 - hypothetical protein gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1853 TDE1854 TDE1854 TDE1854 1882482 1882805 - nucleotidyltransferase identified by match to protein family HMM PF01909 gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1854 TDE1855 TDE1855 TDE1855 1882986 1883273 + hypothetical protein gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1855 TDE1856 TDE1856 TDE1856 1883273 1884016 + radical SAM protein identified by match to protein family HMM PF04055 gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1856 TDE1857 TDE1857 TDE1857 1884019 1884540 - hypothetical protein identified by similarity to OMNI:TP0594 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1857 TDE1858 TDE1858 TDE1858 1884772 1885086 + PadR family transcriptional regulator identified by match to protein family HMM PF03551 gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1858 TDE1859 TDE1859 TDE1859 1885097 1886290 + hypothetical protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1859 TDE1860 TDE1860 TDE1860 1886292 1886822 + hypothetical protein identified by similarity to OMNI:NTL03SP1809 gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1860 TDE1861 TDE1861 TDE1861 1886819 1887046 - hypothetical protein gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1861 TDE1862 TDE1862 TDE1862 1887068 1888039 + hypothetical protein identified by similarity to GP:15023441 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1862 TDE1863 TDE1863 ruvA ruvA 1888064 1888669 - Holliday junction DNA helicase RuvA identified by match to protein family HMM PF00633%3B match to protein family HMM PF01330%3B match to protein family HMM TIGR00084 gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1863 TDE1864 TDE1864 ruvC ruvC 1888662 1889198 - crossover junction endodeoxyribonuclease RuvC identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228 gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1864 TDE1865 TDE1865 TDE1865 1889231 1892284 - M16 family peptidase identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193%3B match to protein family HMM TIGR01612 gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1865 TDE1866 TDE1866 TDE1866 1892349 1892444 - hypothetical protein gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1866 TDE1867 TDE1867 TDE1867 1892441 1892605 - hypothetical protein gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1867 TDE1868 TDE1868 TDE1868 1892586 1892690 + hypothetical protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1868 TDE1869 TDE1869 TDE1869 1892637 1892759 - hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1869 TDE1870 TDE1870 TDE1870 1892746 1893582 - CAAX amino terminal protease identified by match to protein family HMM PF02517 gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1870 TDE1871 TDE1871 TDE1871 1893752 1894612 - hypothetical protein identified by similarity to OMNI:SP0925%3B match to protein family HMM PF02517 gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1871 TDE1872 TDE1872 TDE1872 1894659 1894781 - hypothetical protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1872 TDE1873 TDE1873 TDE1873 1894819 1895685 - hypothetical protein identified by similarity to OMNI:NTL02SP0826%3B match to protein family HMM PF02517 gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1873 TDE1874 TDE1874 TDE1874 1895730 1895852 - hypothetical protein gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1874 TDE1875 TDE1875 TDE1875 1895896 1896996 - hypothetical protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1875 TDE1876 TDE1876 TDE1876 1897029 1897769 - WecB/TagA/CpsF family glycosyl transferase identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696 gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1876 TDE1877 TDE1877 TDE1877 1897750 1898523 - 16S ribosomal RNA methyltransferase RsmE in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1877 TDE1878 TDE1878 TDE1878 1900050 1900835 - HAD superfamily hydrolase identified by match to protein family HMM PF00702 gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1878 TDE1879 TDE1879 TDE1879 1900789 1902535 - ABC transporter ATP-binding protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P37797 gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1879 TDE1880 TDE1880 TDE1880 1902675 1903118 + hypothetical protein identified by similarity to SP:O83103 gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1880 TDE1881 TDE1881 TDE1881 1903140 1903691 + methyltransferase identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095 gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1881 TDE1882 TDE1882 TDE1882 1903684 1904967 + glycosyl hydrolase identified by match to protein family HMM PF00232 gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1882 TDE1883 TDE1883 TDE1883 1905000 1905932 - hypothetical protein identified by similarity to GP:20515627%3B match to protein family HMM PF00892 gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1883 TDE1884 TDE1884 TDE1884 1905964 1906947 - hypothetical protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1884 TDE1885 TDE1885 TDE1885 1906997 1907206 + hypothetical protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1885 TDE1886 TDE1886 TDE1886 1907172 1908578 - MiaB-like tRNA modifying enzyme identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579 gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1886 TDE1887 TDE1887 TDE1887 1908582 1909223 - TPR identified by similarity to OMNI:TP0268%3B match to protein family HMM PF00515 gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1887 TDE1888 TDE1888 TDE1888 1909213 1909590 - hypothetical protein identified by similarity to OMNI:TP0267%3B match to protein family HMM PF04519 gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1888 TDE1889 TDE1889 brnQ brnQ 1909590 1910978 - branched-chain amino acid transport system II carrier protein identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796 gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1889 TDE1890 TDE1890 TDE1890 1911152 1911289 + hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1890 TDE1891 TDE1891 TDE1891 1911346 1912110 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1891 TDE1892 TDE1892 TDE1892 1912205 1912297 + hypothetical protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1892 TDE1893 TDE1893 lepA lepA 1912302 1914107 - GTP-binding protein LepA binds to the ribosome on the universally-conserved alpha-sarcin loop gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1893 TDE1894 TDE1894 TDE1894 1914253 1915101 + ferredoxin involved in the electron transport chain%3B in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1894 TDE1895 TDE1895 era era 1915103 1915987 + GTP-binding protein Era Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1895 TDE1896 TDE1896 purH purH 1915994 1917595 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase identified by similarity to SP:P26978%3B match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1896 TDE1897 TDE1897 purN purN 1917615 1918199 - phosphoribosylglycinamide formyltransferase identified by similarity to SP:P08179%3B match to protein family HMM PF00551%3B match to protein family HMM TIGR00639 gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1897 TDE1898 TDE1898 secA secA 1918212 1920980 - preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1898 TDE1899 TDE1899 TDE1899 1921032 1921178 - hypothetical protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1899 TDE1900 TDE1900 TDE1900 1921264 1921518 + hypothetical protein identified by similarity to OMNI:NTL01LM2232 gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1900 TDE1901 TDE1901 TDE1901 1921531 1922379 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1901 TDE1902 TDE1902 TDE1902 1922467 1922565 - hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1902 TDE1903 TDE1903 TDE1903 1922557 1923195 + hypothetical protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1903 TDE1904 TDE1904 TDE1904 1923287 1923703 - hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1904 TDE1905 TDE1905 TDE1905 1923812 1923967 - hypothetical protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1905 TDE1906 TDE1906 TDE1906 1924023 1924787 + hypothetical protein identified by match to protein family HMM TIGR01784 gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1906 TDE1907 TDE1907 acpS acpS 1924816 1925187 - 4'-phosphopantetheinyl transferase Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1907 TDE1908 TDE1908 TDE1908 1925189 1926148 - hypothetical protein identified by similarity to OMNI:TP0827 gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1908 TDE1909 TDE1909 TDE1909 1926138 1926962 - hypothetical protein identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159 gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1909 TDE1910 TDE1910 dxs dxs 1926966 1928927 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1910 TDE1911 TDE1911 TDE1911 1929033 1929188 - hypothetical protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1911 TDE1912 TDE1912 TDE1912 1929316 1929948 + redox-sensing transcriptional repressor Rex modulates transcription in response to the NADH/NAD(+) redox state gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1912 TDE1913 TDE1913 TDE1913 1929950 1930957 + hypothetical protein identified by similarity to OMNI:NTL01NM01464 gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1913 TDE1914 TDE1914 ruvB ruvB 1930979 1932010 - Holliday junction DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1914 TDE1915 TDE1915 TDE1915 1932018 1933193 - iron-containing alcohol dehydrogenase identified by match to protein family HMM PF00465 gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1915 TDE1916 TDE1916 glpK glpK 1933367 1934857 - glycerol kinase identified by similarity to SP:P08859%3B match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311 gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1916 TDE1917 TDE1917 TDE1917 1934854 1937484 - cytidyltransferase-like protein identified by match to protein family HMM PF02348 gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1917 TDE1918 TDE1918 TDE1918 1937481 1938434 - hypothetical protein identified by similarity to OMNI:BB0665 gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1918 TDE1919 TDE1919 TDE1919 1938409 1939980 - hypothetical protein gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1919 TDE1920 TDE1920 TDE1920 1940008 1940367 - lipoprotein identified by similarity to SP:O83108 gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1920 TDE1921 TDE1921 TDE1921 1940409 1940819 - hypothetical protein gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1921 TDE1922 TDE1922 TDE1922 1941003 1941575 - hypothetical protein gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1922 TDE1923 TDE1923 TDE1923 1941603 1941782 - hypothetical protein gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1923 TDE1924 TDE1924 TDE1924 1941764 1941976 - hypothetical protein gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1924 TDE1925 TDE1925 TDE1925 1942120 1942665 + FKBP-type peptidyl-prolyl cis-trans isomerase identified by match to protein family HMM PF00254 gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1925 TDE1926 TDE1926 TDE1926 1942635 1943723 + hypothetical protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1926 TDE1927 TDE1927 pheT pheT 1944124 1945878 + phenylalanyl-tRNA synthetase subunit beta catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1927 TDE1928 TDE1928 TDE1928 1945888 1946643 + hypothetical protein gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1928 TDE1929 TDE1929 TDE1929 1946664 1947521 - hypothetical protein gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1929 TDE1930 TDE1930 TDE1930 1947522 1948646 - hypothetical protein identified by similarity to OMNI:TP0783 gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1930 TDE1931 TDE1931 cdd cdd 1948670 1949080 + cytidine deaminase identified by similarity to SP:P19079%3B match to protein family HMM PF00383%3B match to protein family HMM TIGR01354 gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1931 TDE1932 TDE1932 TDE1932 1949221 1949499 - hypothetical protein gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1932 TDE1933 TDE1933 TDE1933 1949690 1952701 - hypothetical protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1933 TDE1934 TDE1934 TDE1934 1952754 1952864 + hypothetical protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1934 TDE1935 TDE1935 TDE1935 1953134 1953226 + hypothetical protein gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1935 TDE1936 TDE1936 TDE1936 1953226 1953414 + hypothetical protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1936 TDE1937 TDE1937 TDE1937 1953404 1953508 + hypothetical protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1937 TDE1938 TDE1938 TDE1938 1953780 1954646 + hypothetical protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1938 TDE1939 TDE1939 TDE1939 1954767 1955495 + hypothetical protein gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1939 TDE1940 TDE1940 TDE1940 1955534 1956598 - hypothetical protein gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1940 TDE1941 TDE1941 TDE1941 1956595 1959375 - hypothetical protein gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1941 TDE1942 TDE1942 TDE1942 1959397 1959498 + hypothetical protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1942 TDE1943 TDE1943 rpsD rpsD 1959526 1960146 - 30S ribosomal protein S4 primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1943 TDE1944 TDE1944 TDE1944 1960574 1961131 + hypothetical protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1944 TDE1945 TDE1945 TDE1945 1961209 1961535 - hypothetical protein gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1945 TDE1946 TDE1946 TDE1946 1961550 1962584 - hypothetical protein identified by similarity to SP:O83437 gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1946 TDE1947 TDE1947 TDE1947 1962607 1963539 - ABC transporter permease identified by match to protein family HMM PF02653 gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1947 TDE1948 TDE1948 TDE1948 1963544 1964641 - ABC transporter permease identified by match to protein family HMM PF02653 gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1948 TDE1949 TDE1949 TDE1949 1964634 1966157 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1949 TDE1950 TDE1950 TDE1950 1966281 1967354 - membrane lipoprotein TmpC identified by similarity to SP:P29724%3B match to protein family HMM PF02608 gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1950 TDE1951 TDE1951 TDE1951 1967493 1968419 - ribonuclease Z member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1951 TDE1952 TDE1952 TDE1952 1968486 1969136 - hypothetical protein gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1952 TDE1953 TDE1953 TDE1953 1969120 1969761 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1953 TDE1954 TDE1954 TDE1954 1969926 1970180 + prevent-host-death identified by match to protein family HMM TIGR01552 gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1954 TDE1955 TDE1955 TDE1955 1970280 1970990 - hypothetical protein gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1955 TDE1956 TDE1956 TDE1956 1971254 1971442 + hypothetical protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1956 TDE1957 TDE1957 TDE1957 1971589 1972293 + hypothetical protein gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1957 TDE1958 TDE1958 TDE1958 1972399 1973775 - surface protein identified by similarity to OMNI:NTL02MA4182 gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1958 TDE1959 TDE1959 TDE1959 1973895 1974287 - hypothetical protein identified by similarity to GP:4126654%3B match to protein family HMM PF03681 gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1959 TDE1960 TDE1960 TDE1960 1974438 1974629 + hypothetical protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1960 TDE1961 TDE1961 TDE1961 1974640 1975065 - PilT identified by similarity to OMNI:NTL01NS0682%3B match to protein family HMM PF01850 gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1961 TDE1962 TDE1962 TDE1962 1975043 1975294 - hypothetical protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1962 TDE1963 TDE1963 selB selB 1975429 1977201 + selenocysteine-specific translation elongation factor identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00475 gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1963 TDE1964 TDE1964 TDE1964 1977221 1978870 - Na/Pi cotransporter identified by match to protein family HMM PF02690%3B match to protein family HMM TIGR00704 gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1964 TDE1965 TDE1965 TDE1965 1978985 1980241 - sodium/hydrogen exchanger identified by match to protein family HMM PF00999 gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1965 TDE1966 TDE1966 htrA-1 htrA-1 1980413 1981690 + trypsin domain/PDZ identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595 gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1966 TDE1967 TDE1967 TDE1967 1981697 1982593 + hypothetical protein identified by similarity to OMNI:BB0816 gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1967 TDE1968 TDE1968 ftsJ ftsJ 1982583 1983182 - cell division protein FtsJ identified by match to protein family HMM PF01728 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1968 TDE1969 TDE1969 TDE1969 1983169 1984590 - sigma-54 dependent transcriptional regulator/response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM TIGR01199 gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1969 TDE1970 TDE1970 TDE1970 1984587 1985834 - sensory box histidine kinase identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229 gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1970 TDE1971 TDE1971 TDE1971 1985831 1987120 - DNA polymerase III identified by similarity to SP:P37540 gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1971 TDE1972 TDE1972 TDE1972 1987192 1987314 - hypothetical protein gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1972 TDE1973 TDE1973 TDE1973 1987329 1987796 - CvpA identified by match to protein family HMM PF02674 gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1973 TDE1974 TDE1974 murG murG 1987825 1989000 - undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1974 TDE1975 TDE1975 TDE1975 1989009 1989116 + hypothetical protein gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1975 TDE1976 TDE1976 TDE1976 1989255 1990118 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1976 TDE1977 TDE1977 TDE1977 1990218 1991408 + hypothetical protein identified by similarity to OMNI:NTL01FN0684 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1977 TDE1978 TDE1978 TDE1978 1991591 1991848 - hypothetical protein identified by similarity to OMNI:NTL02SP1102%3B match to protein family HMM PF01919 gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1978 TDE1979 TDE1979 TDE1979 1991845 1992075 - hypothetical protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1979 TDE1980 TDE1980 TDE1980 1992050 1992151 - hypothetical protein gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1980 TDE1981 TDE1981 TDE1981 1992156 1992497 + hypothetical protein gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1981 TDE1982 TDE1982 TDE1982 1992601 1993074 - hypothetical protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1982 TDE1983 TDE1983 TDE1983 1993466 1996429 - hypothetical protein gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1983 TDE1984 TDE1984 TDE1984 1996444 1997655 - hypothetical protein gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1984 TDE1985 TDE1985 TDE1985 1997645 2000419 - hypothetical protein gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1985 TDE1986 TDE1986 TDE1986 2000373 2002283 - adenylate cyclase identified by similarity to SP:P43524%3B match to protein family HMM PF00211%3B match to protein family HMM PF00672 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1986 TDE1987 TDE1987 TDE1987 2002452 2002862 + hypothetical protein identified by similarity to SP:O83698 gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1987 TDE1988 TDE1988 TDE1988 2002879 2005650 + hypothetical protein identified by similarity to SP:O83326 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1988 TDE1989 TDE1989 TDE1989 2005675 2006433 - acyltransferase identified by match to protein family HMM PF01553 gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1989 TDE1990 TDE1990 TDE1990 2006457 2008586 - ATP-dependent helicase DinG identified by similarity to SP:P54394 gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1990 TDE1991 TDE1991 TDE1991 2008724 2009488 - hypothetical protein identified by match to protein family HMM TIGR01784 gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1991 TDE1992 TDE1992 TDE1992 2009604 2010962 + OmpA protein identified by similarity to SP:P38369%3B match to protein family HMM PF00691 gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1992 TDE1993 TDE1993 aspA aspA 2011007 2012398 - aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1993 TDE1994 TDE1994 TDE1994 2012432 2012539 - hypothetical protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1994 TDE1995 TDE1995 TDE1995 2012604 2014304 + magnesium chelatase identified by similarity to SP:P45049%3B match to protein family HMM PF01078%3B match to protein family HMM TIGR00368 gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1995 TDE1996 TDE1996 TDE1996 2014383 2014943 + hypothetical protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1996 TDE1997 TDE1997 TDE1997 2014936 2015316 + hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1997 TDE1998 TDE1998 TDE1998 2015440 2017203 + phosphohexose mutase identified by similarity to SP:P18159%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880 gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1998 TDE1999 TDE1999 TDE1999 2017203 2017856 + DNA polymerase III identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573 gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=TDE1999 TDE2000 TDE2000 TDE2000 2017999 2019699 + ABC transporter ATP-binding protein/peptidase identified by similarity to SP:Q03203%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2000 TDE2001 TDE2001 TDE2001 2019865 2021658 - oligoendopeptidase F identified by match to protein family HMM PF01432 gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2001 TDE2002 TDE2002 TDE2002 2021689 2022285 - hypothetical protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2002 TDE2003 TDE2003 TDE2003 2022417 2023691 + internalin-like protein identified by similarity to SP:P25146%3B match to protein family HMM PF00560 gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2003 TDE2004 TDE2004 TDE2004 2023762 2023905 + hypothetical protein gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2004 TDE2005 TDE2005 TDE2005 2023916 2024470 + hypothetical protein identified by similarity to OMNI:EF0579 gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2005 TDE2006 TDE2006 TDE2006 2024561 2026930 + hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2006 TDE2007 TDE2007 TDE2007 2026959 2028701 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2007 TDE2008 TDE2008 TDE2008 2028718 2030475 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2008 TDE2009 TDE2009 TDE2009 2030522 2031307 + hypothetical protein identified by similarity to SP:O83768 gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2009 TDE2010 TDE2010 TDE2010 2031458 2031973 + hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2010 TDE2011 TDE2011 TDE2011 2032070 2033542 + hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2011 TDE2012 TDE2012 TDE2012 2033890 2034441 - hypothetical protein gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2012 TDE2013 TDE2013 TDE2013 2034449 2034796 - hypothetical protein gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2013 TDE2014 TDE2014 TDE2014 2035525 2036511 - ankyrin repeat-containing protein identified by match to protein family HMM PF00023 gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2014 TDE2015 TDE2015 TDE2015 2036501 2037622 - lipoprotein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2015 TDE2016 TDE2016 TDE2016 2037914 2038984 - hypothetical protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2016 TDE2017 TDE2017 TDE2017 2039113 2039487 - hypothetical protein gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2017 TDE2018 TDE2018 TDE2018 2039678 2040640 - lipoprotein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2018 TDE2019 TDE2019 TDE2019 2040564 2040809 - hypothetical protein gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2019 TDE2020 TDE2020 TDE2020 2040824 2044246 - YD repeat-containing protein identified by match to protein family HMM PF05593%3B match to protein family HMM TIGR01612%3B match to protein family HMM TIGR01643 gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2020 TDE2021 TDE2021 TDE2021 2044247 2044849 - hypothetical protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2021 TDE2022 TDE2022 TDE2022 2044846 2049312 - YD repeat-containing protein identified by match to protein family HMM PF05593%3B match to protein family HMM TIGR01612%3B match to protein family HMM TIGR01643 gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2022 TDE2023 TDE2023 TDE2023 2049595 2050704 - TPR identified by match to protein family HMM PF00515 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2023 TDE2024 TDE2024 TDE2024 2050701 2051111 - hypothetical protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2024 TDE2025 TDE2025 TDE2025 2051165 2051530 - hypothetical protein gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2025 TDE2026 TDE2026 TDE2026 2051582 2052592 - hypothetical protein gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2026 TDE2027 TDE2027 TDE2027 2052789 2053058 + hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2027 TDE2028 TDE2028 TDE2028 2053063 2057079 + OmpA protein identified by match to protein family HMM PF00691%3B match to protein family HMM TIGR01612 gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2028 TDE2029 TDE2029 TDE2029 2057238 2058092 - TatD family hydrolase identified by match to protein family HMM PF01026 gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2029 TDE2030 TDE2030 TDE2030 2058394 2059179 + RlpA family lipoprotein identified by similarity to SP:O83958%3B match to protein family HMM PF03330%3B match to protein family HMM PF05036%3B match to protein family HMM TIGR00413 gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2030 TDE2031 TDE2031 TDE2031 2059159 2059251 - hypothetical protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2031 TDE2032 TDE2032 TDE2032 2059261 2060259 - hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2032 TDE2033 TDE2033 TDE2033 2060382 2061566 - ISTde1%2C transposase identified by similarity to SP:Q54513 gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2033 TDE2034 TDE2034 TDE2034 2061726 2062883 + group 1 glycosyl transferase identified by match to protein family HMM PF00534 gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2034 TDE2035 TDE2035 glgC glgC 2062941 2064215 + glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2035 TDE2036 TDE2036 TDE2036 2064230 2066728 - AAA ATPase identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF02861 gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2036 TDE2037 TDE2037 TDE2037 2066737 2067810 - ATP:guanido phosphotransferase identified by match to protein family HMM PF00217 gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2037 TDE2038 TDE2038 TDE2038 2067794 2068291 - UVR identified by match to protein family HMM PF02151 gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2038 TDE2039 TDE2039 TDE2039 2068288 2069634 - lipoprotein releasing system%2C permease identified by similarity to SP:P75958%3B match to protein family HMM PF02687 gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2039 TDE2040 TDE2040 lolD lolD 2069631 2070311 - lipoprotein releasing system%2C ATP-binding protein identified by similarity to SP:P75957%3B match to protein family HMM PF00005 gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2040 TDE2041 TDE2041 TDE2041 2070304 2071584 - lipoprotein releasing system%2C permease identified by match to protein family HMM PF02687 gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2041 TDE2042 TDE2042 TDE2042 2071586 2072269 - hypothetical protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2042 TDE2043 TDE2043 ftsY ftsY 2072270 2073148 - signal recognition particle-docking protein FtsY identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR00064 gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2043 TDE2044 TDE2044 TDE2044 2073138 2074706 - lipoprotein gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2044 TDE2045 TDE2045 TDE2045 2074703 2075023 - hypothetical protein gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2045 TDE2046 TDE2046 prfB prfB 2075020 2076142 - peptide chain release factor 2%2C programmed frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:P28367%3B match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020 gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2046 TDE2047 TDE2047 TDE2047 2076148 2076441 - hypothetical protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2047 TDE2048 TDE2048 TDE2048 2076551 2077954 + hypothetical protein identified by similarity to SP:O83593 gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2048 TDE2049 TDE2049 TDE2049 2078005 2079597 + solute-binding family 5 protein identified by match to protein family HMM PF00496 gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2049 TDE2050 TDE2050 TDE2050 2079797 2080030 - hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2050 TDE2051 TDE2051 TDE2051 2080080 2080388 - hypothetical protein identified by similarity to GP:12667177%3B match to protein family HMM PF04365 gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2051 TDE2052 TDE2052 TDE2052 2080542 2081744 + class V aminotransferase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01979 gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2052 TDE2053 TDE2053 TDE2053 2081779 2082213 + NifU family protein identified by similarity to SP:P77310%3B match to protein family HMM PF01592 gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2053 TDE2054 TDE2054 TDE2054 2082276 2082614 - hypothetical protein identified by similarity to GP:19713042 gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2054 TDE2055 TDE2055 hbpB hbpB 2082648 2083859 - hemin-binding protein B identified by similarity to GP:14595292 gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2055 TDE2056 TDE2056 TDE2056 2083949 2085160 - outer membrane hemin-binding protein A identified by similarity to GP:14578638 gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2056 TDE2057 TDE2057 TDE2057 2085248 2085433 - hypothetical protein gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2057 TDE2058 TDE2058 TDE2058 2085444 2086262 - hypothetical protein identified by similarity to OMNI:NTL01FN1523 gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2058 TDE2059 TDE2059 TDE2059 2086399 2086599 - hypothetical protein gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2059 TDE2060 TDE2060 TDE2060 2086661 2086903 + hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2060 TDE2061 TDE2061 TDE2061 2086869 2087882 - hypothetical protein identified by similarity to OMNI:NTL01FN1523 gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2061 TDE2062 TDE2062 TDE2062 2087892 2088434 - hypothetical protein identified by similarity to GP:19713042 gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2062 TDE2063 TDE2063 feoB feoB 2088520 2091354 - ferrous iron transporter B identified by match to protein family HMM PF02421%3B match to protein family HMM TIGR00231 gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2063 TDE2064 TDE2064 feoA feoA 2091358 2091582 - ferrous iron transporter A identified by similarity to SP:P33649%3B match to protein family HMM PF04023 gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2064 TDE2065 TDE2065 TDE2065 2091606 2091869 - FeoA identified by match to protein family HMM PF04023 gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2065 TDE2066 TDE2066 xseB xseB 2092046 2092282 + exodeoxyribonuclease VII small subunit identified by similarity to SP:P22938%3B match to protein family HMM PF02609 gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2066 TDE2067 TDE2067 TDE2067 2092294 2094086 + DNA mismatch repair protein MutL%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to SP:O83325 gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2067 TDE2068 TDE2068 TDE2068 2094175 2096655 + hypothetical protein identified by similarity to SP:P18164 gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2068 TDE2069 TDE2069 TDE2069 2096772 2097149 + endoribonuclease L-PSP identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004 gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2069 TDE2070 TDE2070 TDE2070 2097175 2098272 + hypothetical protein identified by similarity to SP:O83469 gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2070 TDE2071 TDE2071 TDE2071 2098381 2098653 + hypothetical protein gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2071 TDE2072 TDE2072 TDE2072 2098953 2099255 + hypothetical protein identified by similarity to SP:O83105 gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2072 TDE2073 TDE2073 TDE2073 2099311 2100564 + TPR identified by similarity to OMNI:TP0067%3B match to protein family HMM PF00515 gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2073 TDE2074 TDE2074 TDE2074 2100554 2101597 + radical SAM protein identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048 gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2074 TDE2075 TDE2075 TDE2075 2101594 2104608 - GGDEF domain/EAL identified by match to protein family HMM PF00563%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254%3B match to protein family HMM TIGR01612 gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2075 TDE2076 TDE2076 TDE2076 2104620 2106098 - hypothetical protein gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2076 TDE2077 TDE2077 TDE2077 2106160 2106855 - hypothetical protein gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2077 TDE2078 TDE2078 TDE2078 2106878 2107606 - TPR identified by similarity to SP:O83306%3B match to protein family HMM PF00515 gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2078 TDE2079 TDE2079 TDE2079 2107608 2109125 - sigma-54 dependent transcriptional regulator identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM TIGR01199 gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2079 TDE2080 TDE2080 TDE2080 2109139 2111574 - cytidylate kinase identified by match to protein family HMM PF00575%3B match to protein family HMM PF02224%3B match to protein family HMM TIGR00017%3B match to protein family HMM TIGR00717 gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2080 TDE2081 TDE2081 TDE2081 2111669 2112589 + hypothetical protein identified by similarity to OMNI:TP0832 gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2081 TDE2082 TDE2082 TDE2082 2112579 2112677 - hypothetical protein gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2082 TDE2083 TDE2083 TDE2083 2112702 2113253 - anti-anti-sigma factor identified by match to protein family HMM PF01740%3B match to protein family HMM TIGR00377 gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2083 TDE2084 TDE2084 TDE2084 2113534 2114289 + RNA methyltransferase identified by match to protein family HMM PF00588 gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2084 TDE2085 TDE2085 pyrH pyrH 2114322 2115017 + uridylate kinase Catalyzes the phosphorylation of UMP to UDP gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2085 TDE2086 TDE2086 TDE2086 2115017 2115535 + DnaJ protein identified by match to protein family HMM PF00226 gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2086 TDE2087 TDE2087 infA infA 2115558 2115776 - translation initiation factor IF-1 stimulates the activities of the other two initiation factors%2C IF-2 and IF-3 gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2087 TDE2088 TDE2088 TDE2088 2115884 2116243 + C4 zinc finger identified by match to protein family HMM PF01258 gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2088 TDE2089 TDE2089 ffh ffh 2116322 2117653 - signal recognition particle protein identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959 gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2089 TDE2090 TDE2090 gpsA gpsA 2117653 2118726 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2090 TDE2091 TDE2091 TDE2091 2118853 2119686 + amino acid ABC transporter amino acid-binding protein identified by similarity to GP:3603430%3B match to protein family HMM PF00497 gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2091 TDE2092 TDE2092 TDE2092 2119703 2120542 + amino acid ABC transporter amino acid-binding protein identified by similarity to SP:P39174%3B match to protein family HMM PF00497 gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2092 TDE2093 TDE2093 TDE2093 2120560 2121093 - hypothetical protein identified by similarity to OMNI:NTL01FN0906 gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2093 TDE2094 TDE2094 TDE2094 2121167 2121409 - hypothetical protein gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2094 TDE2095 TDE2095 TDE2095 2121889 2123343 + hypothetical protein identified by match to protein family HMM PF00144 gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2095 TDE2096 TDE2096 TDE2096 2123340 2124551 + hypothetical protein identified by similarity to GP:20515197 gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2096 TDE2097 TDE2097 TDE2097 2124568 2124831 - hypothetical protein identified by similarity to GP:20521574 gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2097 TDE2098 TDE2098 TDE2098 2125041 2125175 - hypothetical protein gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2098 TDE2099 TDE2099 TDE2099 2125167 2125289 + hypothetical protein gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2099 TDE2100 TDE2100 TDE2100 2125510 2125632 + hypothetical protein gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2100 TDE2101 TDE2101 TDE2101 2125639 2126709 - hypothetical protein identified by similarity to GP:20906334%3B match to protein family HMM PF03781 gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2101 TDE2102 TDE2102 TDE2102 2126706 2127437 - hypothetical protein gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2102 TDE2103 TDE2103 TDE2103 2127617 2128483 - glycosyl transferase gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2103 TDE2104 TDE2104 TDE2104 2128615 2131173 - hypothetical protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2104 TDE2105 TDE2105 TDE2105 2131296 2131574 - hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2105 TDE2106 TDE2106 TDE2106 2131543 2131830 - hypothetical protein identified by similarity to OMNI:NTL01XF00534%3B match to protein family HMM PF04365 gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2106 TDE2107 TDE2107 TDE2107 2131849 2132964 - dihydroorotase identified by similarity to SP:P77884 gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2107 TDE2108 TDE2108 TDE2108 2132992 2133585 - hypothetical protein gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2108 TDE2109 TDE2109 TDE2109 2133665 2135377 - DEAD/DEAH box helicase identified by similarity to SP:P23304%3B match to protein family HMM PF00270%3B match to protein family HMM PF00271 gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2109 TDE2110 TDE2110 pyrF pyrF 2135469 2136371 + orotidine 5'-phosphate decarboxylase identified by match to protein family HMM PF00215 gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2110 TDE2111 TDE2111 TDE2111 2136361 2137275 - hypothetical protein gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2111 TDE2112 TDE2112 TDE2112 2137272 2138759 - hypothetical protein identified by similarity to OMNI:TP0879 gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2112 TDE2113 TDE2113 TDE2113 2138756 2139502 - hypothetical protein identified by similarity to OMNI:TP0880 gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2113 TDE2114 TDE2114 TDE2114 2139480 2140265 - ABC transporter ATP-binding protein identified by similarity to SP:P46903%3B match to protein family HMM PF00005 gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2114 TDE2115 TDE2115 TDE2115 2140270 2144850 - HAMP domain-containing protein identified by match to protein family HMM PF00672%3B match to protein family HMM TIGR01612 gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2115 TDE2116 TDE2116 TDE2116 2144868 2147798 - hypothetical protein identified by similarity to SP:O83827%3B match to protein family HMM TIGR01612 gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2116 TDE2117 TDE2117 TDE2117 2147946 2149235 + hypothetical protein identified by similarity to OMNI:TP0548 gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2117 TDE2118 TDE2118 TDE2118 2149244 2151355 - DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2118 TDE2119 TDE2119 grdB-2 grdB-2 2151488 2152783 - glycine reductase complex selenoprotein GrdB2 Selenoprotein.identified by similarity to SP:P52217%3B match to protein family HMM TIGR01917%3B match to protein family HMM TIGR01918 gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2119 TDE2120 TDE2120 grdE-2 grdE-2 2152795 2154084 - glycine reductase complex proprotein GrdE2 identified by similarity to GP:11065687 gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2120 TDE2121 TDE2121 TDE2121 2154202 2154819 - hypothetical protein identified by similarity to GP:15024530 gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2121 TDE2122 TDE2122 TDE2122 2154816 2156000 - DHH super identified by match to protein family HMM PF01368 gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2122 TDE2123 TDE2123 TDE2123 2156164 2156469 + hypothetical protein identified by similarity to SP:Q9A5I0%3B match to protein family HMM PF02617 gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2123 TDE2124 TDE2124 clpA clpA 2156466 2158823 + ATP-dependent Clp protease%2C ATP-binding subunit ClpA identified by similarity to SP:P15716%3B match to protein family HMM PF00004%3B match to protein family HMM PF02861 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2124 TDE2125 TDE2125 aat aat 2158851 2159591 + leucyl/phenylalanyl-tRNA--protein transferase leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2125 TDE2126 TDE2126 TDE2126 2159673 2159903 + hypothetical protein gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2126 TDE2127 TDE2127 TDE2127 2159903 2160304 + vapC protein identified by similarity to GP:438534%3B match to protein family HMM PF01850 gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2127 TDE2128 TDE2128 TDE2128 2160329 2161618 + hypothetical protein gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2128 TDE2129 TDE2129 TDE2129 2161603 2161695 + hypothetical protein gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2129 TDE2130 TDE2130 TDE2130 2161664 2162149 - hypothetical protein gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2130 TDE2131 TDE2131 TDE2131 2162180 2162773 - cobalt transporter CbiM catalyzes the ATP-dependent transport of cobalt gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2131 TDE2132 TDE2132 TDE2132 2162846 2163631 - cobalt ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2132 TDE2133 TDE2133 TDE2133 2163619 2164413 - cobalt transporter gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2133 TDE2134 TDE2134 TDE2134 2164587 2164682 + hypothetical protein gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2134 TDE2135 TDE2135 TDE2135 2164726 2165478 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2135 TDE2136 TDE2136 TDE2136 2165480 2165749 - hypothetical protein gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2136 TDE2137 TDE2137 TDE2137 2166265 2171769 + hypothetical protein identified by similarity to GP:19714082%3B match to protein family HMM TIGR01612 gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2137 TDE2138 TDE2138 TDE2138 2171771 2172154 + ankyrin repeat-containing protein identified by match to protein family HMM PF00023 gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2138 TDE2139 TDE2139 TDE2139 2172172 2172957 + hypothetical protein gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2139 TDE2140 TDE2140 ptrB ptrB 2173173 2175230 - protease II identified by similarity to SP:P24555%3B match to protein family HMM PF00326%3B match to protein family HMM PF02897 gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2140 TDE2141 TDE2141 TDE2141 2175673 2175858 - hypothetical protein gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2141 TDE2142 TDE2142 TDE2142 2175909 2178047 + methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2142 TDE2143 TDE2143 TDE2143 2178247 2180544 + penicillin-binding protein identified by similarity to SP:P76577%3B match to protein family HMM PF00905%3B match to protein family HMM PF00912 gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2143 TDE2144 TDE2144 TDE2144 2180541 2181836 - hypothetical protein identified by similarity to GP:19714754 gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2144 TDE2145 TDE2145 TDE2145 2181915 2183015 - hypothetical protein identified by match to protein family HMM PF03781 gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2145 TDE2146 TDE2146 TDE2146 2183200 2184114 + alpha/beta fold family hydrolase identified by match to protein family HMM PF00561 gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2146 TDE2147 TDE2147 TDE2147 2184126 2184587 - lipoprotein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2147 TDE2148 TDE2148 TDE2148 2184687 2186036 - OmpA protein identified by similarity to SP:P38369%3B match to protein family HMM PF00691 gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2148 TDE2149 TDE2149 TDE2149 2186055 2187383 - Slt family transglycosylase identified by similarity to SP:P23931%3B match to protein family HMM PF01464%3B match to protein family HMM PF01476 gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2149 TDE2150 TDE2150 TDE2150 2187344 2188366 - hypothetical protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2150 TDE2151 TDE2151 TDE2151 2188430 2188897 - hypothetical protein identified by similarity to SP:O83817%3B match to protein family HMM PF02639 gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2151 TDE2152 TDE2152 TDE2152 2188894 2189193 - hypothetical protein identified by similarity to SP:O83818 gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2152 TDE2153 TDE2153 TDE2153 2189199 2189663 - hypothetical protein identified by similarity to SP:O83819 gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2153 TDE2154 TDE2154 rplT rplT 2189665 2190024 - 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2154 TDE2155 TDE2155 rpmI rpmI 2190055 2190255 - 50S ribosomal protein L35 identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001 gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2155 TDE2156 TDE2156 infC infC 2190282 2190809 - translation initiation factor IF-3 IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2156 TDE2157 TDE2157 TDE2157 2191079 2191792 + ABC transporter permease identified by similarity to GP:23325909 gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2157 TDE2158 TDE2158 TDE2158 2191804 2193312 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2158 TDE2159 TDE2159 TDE2159 2193329 2193934 + hypothetical protein gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2159 TDE2160 TDE2160 TDE2160 2193963 2194058 - hypothetical protein gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2160 TDE2161 TDE2161 TDE2161 2194230 2194784 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2161 TDE2162 TDE2162 TDE2162 2194829 2195620 + NOL1\NOP2\sun family protein identified by match to protein family HMM PF01189 gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2162 TDE2163 TDE2163 TDE2163 2195623 2196303 - hypothetical protein identified by similarity to GP:15024690 gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2163 TDE2164 TDE2164 TDE2164 2196338 2197045 - hypothetical protein gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2164 TDE2165 TDE2165 hypB hypB 2197143 2197805 - hydrogenase nickel incorporation protein HypB identified by match to protein family HMM PF01495%3B match to protein family HMM TIGR00073 gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2165 TDE2166 TDE2166 hypA hypA 2197833 2198174 - hydrogenase nickel incorporation protein HypA identified by match to protein family HMM PF01155 gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2166 TDE2167 TDE2167 TDE2167 2198193 2200937 - pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00037%3B match to protein family HMM PF00070 gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2167 TDE2168 TDE2168 TDE2168 2200965 2201093 - hypothetical protein gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2168 TDE2169 TDE2169 TDE2169 2201177 2201569 + hypothetical protein gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2169 TDE2170 TDE2170 TDE2170 2201696 2201839 - hypothetical protein gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2170 TDE2171 TDE2171 TDE2171 2201867 2202631 - hypothetical protein identified by similarity to OMNI:NTL01FN0398 gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2171 TDE2172 TDE2172 TDE2172 2202742 2202858 - hypothetical protein gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2172 TDE2173 TDE2173 TDE2173 2202827 2203078 - hypothetical protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2173 TDE2174 TDE2174 TDE2174 2203189 2204124 - hypothetical protein identified by similarity to OMNI:NTL01ATA1201 gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2174 TDE2175 TDE2175 TDE2175 2204228 2204410 - hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2175 TDE2176 TDE2176 TDE2176 2204491 2206329 - site-specific recombinase identified by similarity to GP:551136 gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2176 TDE2177 TDE2177 TDE2177 2206390 2206614 - hypothetical protein identified by similarity to GP:8100658 gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2177 TDE2178 TDE2178 TDE2178 2206773 2208848 - hypothetical protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2178 TDE2179 TDE2179 TDE2179 2209088 2210674 + voltage-gated chloride channel identified by match to protein family HMM PF00654%3B match to protein family HMM PF02080 gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2179 TDE2180 TDE2180 trmE trmE 2210680 2212098 - tRNA modification GTPase TrmE in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2180 TDE2181 TDE2181 TDE2181 2212085 2213125 - PAP2 (2 phosphatidic acid phosphatase) family protein identified by match to protein family HMM PF01569 gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2181 TDE2182 TDE2182 TDE2182 2213125 2215125 - hypothetical protein identified by similarity to OMNI:TP0083 gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2182 TDE2183 TDE2183 TDE2183 2215339 2215995 + hypothetical protein identified by similarity to SP:O83608 gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2183 TDE2184 TDE2184 TDE2184 2216002 2218182 + hypothetical protein identified by similarity to SP:O83607 gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2184 TDE2185 TDE2185 TDE2185 2218192 2219436 + lipoprotein gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2185 TDE2186 TDE2186 TDE2186 2219488 2221143 + AMP-binding protein identified by match to protein family HMM PF00501 gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2186 TDE2187 TDE2187 TDE2187 2221237 2221638 - ParB-like nuclease identified by match to protein family HMM PF02195 gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2187 TDE2188 TDE2188 TDE2188 2221664 2223211 - hypothetical protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2188 TDE2189 TDE2189 TDE2189 2223288 2224238 - M23/M37 peptidase identified by match to protein family HMM PF01551 gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2189 TDE2190 TDE2190 recJ recJ 2224251 2226383 - single-stranded-DNA-specific exonuclease RecJ identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644 gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2190 TDE2191 TDE2191 pdp pdp 2226410 2227741 - pyrimidine-nucleoside phosphorylase identified by similarity to SP:P77836%3B match to protein family HMM PF00591%3B match to protein family HMM PF02885 gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2191 TDE2192 TDE2192 TDE2192 2227901 2229319 + threonine synthase catalyzes the formation of L-threonine from O-phospho-L-homoserine gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2192 TDE2193 TDE2193 TDE2193 2229353 2229850 - deoxycytidylate deaminase identified by match to protein family HMM PF00383 gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2193 TDE2194 TDE2194 TDE2194 2229935 2231122 - 8-amino-7-oxononanoate synthase identified by similarity to SP:P22806%3B match to protein family HMM PF00155%3B match to protein family HMM TIGR00858%3B match to protein family HMM TIGR01825 gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2194 TDE2195 TDE2195 TDE2195 2231261 2231971 + RNA pseudouridylate synthase identified by match to protein family HMM PF00849 gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2195 TDE2196 TDE2196 TDE2196 2231973 2232737 - hypothetical protein gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2196 TDE2197 TDE2197 TDE2197 2232837 2232938 - hypothetical protein gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2197 TDE2198 TDE2198 TDE2198 2232992 2236597 - pyruvate-ferredoxin oxidoreductase identified by similarity to GP:1770208%3B match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR01612 gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2198 TDE2199 TDE2199 TDE2199 2236566 2237240 - racemase identified by match to protein family HMM PF01177 gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2199 TDE2200 TDE2200 megL megL 2237340 2238545 - methionine gamma-lyase catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2200 TDE2201 TDE2201 TDE2201 2238582 2238713 - hypothetical protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2201 TDE2202 TDE2202 TDE2202 2238774 2239664 + membrane protein identified by match to protein family HMM PF00892 gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2202 TDE2203 TDE2203 TDE2203 2239716 2241079 - Na+/H+ antiporter %2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to GP:2688566 gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2203 TDE2204 TDE2204 TDE2204 2241309 2242610 + Na+/H+ antiporter identified by similarity to OMNI:NTL01FN0925%3B match to protein family HMM PF03553 gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2204 TDE2205 TDE2205 TDE2205 2242665 2244845 - enoate reductase identified by similarity to GP:2765041%3B match to protein family HMM PF00070%3B match to protein family HMM PF00724 gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2205 TDE2206 TDE2206 TDE2206 2245011 2245454 - hypothetical protein identified by similarity to SP:Q8TU30 gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2206 TDE2207 TDE2207 TDE2207 2245456 2246724 - hypothetical protein identified by similarity to OMNI:NTL01PA1594 gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2207 TDE2208 TDE2208 TDE2208 2246873 2247652 + hypothetical protein identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486 gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2208 TDE2209 TDE2209 TDE2209 2247729 2249360 + CarB identified by similarity to SP:P38100 gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2209 TDE2210 TDE2210 TDE2210 2249484 2250791 - hypothetical protein gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2210 TDE2211 TDE2211 TDE2211 2250807 2251406 - hypothetical protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2211 TDE2212 TDE2212 galK galK 2251572 2252771 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2212 TDE2213 TDE2213 TDE2213 2252940 2253197 + hypothetical protein identified by similarity to OMNI:NTL01NS5272 gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2213 TDE2214 TDE2214 TDE2214 2253190 2253525 + hypothetical protein identified by similarity to OMNI:DRB0141%3B match to protein family HMM PF05534 gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2214 TDE2215 TDE2215 TDE2215 2253531 2255225 - galactoside ABC transporter permease identified by similarity to SP:P23200%3B match to protein family HMM PF02653 gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2215 TDE2216 TDE2216 mglA mglA 2255250 2256743 - galactoside ABC transporter ATP-binding protein identified by similarity to SP:P23199%3B match to protein family HMM PF00005 gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2216 TDE2217 TDE2217 mglB mglB 2256854 2258065 - galactose/glucose-binding lipoprotein identified by similarity to SP:Q08255 gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2217 TDE2218 TDE2218 TDE2218 2258160 2259062 + hypothetical protein identified by similarity to GP:1930081 gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2218 TDE2219 TDE2219 TDE2219 2259051 2260736 - hypothetical protein identified by similarity to OMNI:TP0926 gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2219 TDE2220 TDE2220 proS proS 2261025 2262812 + prolyl-tRNA synthetase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2220 TDE2221 TDE2221 TDE2221 2262824 2263858 + hypothetical protein identified by similarity to SP:O83194 gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2221 TDE2222 TDE2222 TDE2222 2263878 2264762 + hypothetical protein identified by similarity to OMNI:TP0157 gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2222 TDE2223 TDE2223 TDE2223 2264782 2264886 + hypothetical protein gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2223 TDE2224 TDE2224 TDE2224 2264883 2265011 + hypothetical protein gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2224 TDE2225 TDE2225 TDE2225 2265008 2265415 + thioesterase identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051 gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2225 TDE2226 TDE2226 TDE2226 2265501 2266472 + ABC transporter substrate-binding protein identified by match to protein family HMM PF01297 gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2226 TDE2227 TDE2227 TDE2227 2266535 2267194 + hypothetical protein identified by similarity to OMNI:TP0033 gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2227 TDE2228 TDE2228 TDE2228 2267377 2268822 - aminoacyl-histidine dipeptidase identified by similarity to SP:P15288%3B match to protein family HMM PF01546%3B match to protein family HMM TIGR01893 gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2228 TDE2229 TDE2229 TDE2229 2268922 2269167 - hypothetical protein identified by similarity to GP:14484990 gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2229 TDE2230 TDE2230 TDE2230 2269151 2269513 + hypothetical protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2230 TDE2231 TDE2231 TDE2231 2269778 2270599 + internalin-like protein identified by similarity to SP:P25146%3B match to protein family HMM PF00560 gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2231 TDE2232 TDE2232 TDE2232 2270596 2271375 - iron compound ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2232 TDE2233 TDE2233 TDE2233 2271381 2272400 - iron compound ABC transporter permease identified by match to protein family HMM PF01032 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2233 TDE2234 TDE2234 TDE2234 2272400 2273335 - iron compound ABC transporter periplasmic iron compound-binding protein identified by match to protein family HMM PF01497 gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2234 TDE2235 TDE2235 TDE2235 2273440 2274678 - methylaspartate ammonia-lyase identified by similarity to GP:18158999%3B match to protein family HMM TIGR01502 gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2235 TDE2236 TDE2236 glmE glmE 2274750 2276207 - methylaspartate mutase subunit E identified by similarity to SP:P80077%3B match to protein family HMM TIGR01503 gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2236 TDE2237 TDE2237 TDE2237 2276388 2276492 - hypothetical protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2237 TDE2238 TDE2238 TDE2238 2276477 2276605 + hypothetical protein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2238 TDE2239 TDE2239 TDE2239 2276644 2277636 - hypothetical protein identified by similarity to OMNI:NTL01NS3490%3B match to protein family HMM PF03781 gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2239 TDE2240 TDE2240 TDE2240 2277715 2278512 - hypothetical protein gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2240 TDE2241 TDE2241 TDE2241 2278596 2279741 - glycosyl transferase identified by match to protein family HMM PF00535 gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2241 TDE2242 TDE2242 TDE2242 2279659 2282124 - hypothetical protein identified by similarity to SP:P18164 gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2242 TDE2243 TDE2243 TDE2243 2282304 2283044 - CutC protein identified by match to protein family HMM PF03932 gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2243 TDE2244 TDE2244 TDE2244 2283160 2284380 + hypothetical protein identified by similarity to SP:O83155 gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2244 TDE2245 TDE2245 TDE2245 2284380 2286197 + DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2245 TDE2246 TDE2246 TDE2246 2286272 2286514 + hypothetical protein identified by similarity to OMNI:NMB2037 gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2246 TDE2247 TDE2247 TDE2247 2286502 2286831 + PemK protein identified by match to protein family HMM PF02452 gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2247 TDE2248 TDE2248 TDE2248 2286846 2287568 - HesA/MoeB/ThiF identified by match to protein family HMM PF00899 gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2248 TDE2249 TDE2249 mraY mraY 2287588 2288646 - phospho-N-acetylmuramoyl-pentapeptide-transferase identified by match to protein family HMM PF00953 gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2249 TDE2250 TDE2250 TDE2250 2288708 2289469 + hypothetical protein identified by similarity to GP:10174688%3B match to protein family HMM PF04018 gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2250 TDE2251 TDE2251 uraA uraA 2289580 2290842 + uracil transporter identified by similarity to SP:P33780%3B match to protein family HMM PF00860%3B match to protein family HMM TIGR00801 gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2251 TDE2252 TDE2252 TDE2252 2290936 2291133 + hypothetical protein identified by similarity to OMNI:NTL03CPA0027 gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2252 TDE2253 TDE2253 TDE2253 2291143 2291559 + hypothetical protein identified by similarity to GP:4126654 gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2253 TDE2254 TDE2254 TDE2254 2291535 2291732 - hypothetical protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2254 TDE2255 TDE2255 TDE2255 2291731 2292243 + hypothetical protein gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2255 TDE2256 TDE2256 TDE2256 2292296 2293477 - hypothetical protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2256 TDE2257 TDE2257 TDE2257 2293593 2295194 - 5'-nucleotidase identified by match to protein family HMM PF00149%3B match to protein family HMM PF02872 gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2257 TDE2258 TDE2258 TDE2258 2295424 2296491 - surface antigen BspA identified by similarity to GP:3005673%3B match to protein family HMM PF00560 gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2258 TDE2259 TDE2259 TDE2259 2296617 2297327 - hypothetical protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2259 TDE2260 TDE2260 TDE2260 2297478 2297633 + hypothetical protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2260 TDE2261 TDE2261 TDE2261 2298005 2298103 - hypothetical protein gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2261 TDE2262 TDE2262 TDE2262 2298123 2299367 - U32 family peptidase identified by match to protein family HMM PF01136 gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2262 TDE2263 TDE2263 TDE2263 2299367 2300281 - acetyl hydrolase identified by similarity to SP:Q01109 gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2263 TDE2264 TDE2264 TDE2264 2300333 2302123 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2264 TDE2265 TDE2265 TDE2265 2302305 2302694 + hypothetical protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2265 TDE2266 TDE2266 TDE2266 2303132 2304118 - reverse transcriptase identified by match to protein family HMM PF00078 gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2266 TDE2267 TDE2267 TDE2267 2304072 2304554 - hypothetical protein identified by match to protein family HMM PF00570 gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2267 TDE2268 TDE2268 TDE2268 2304912 2305049 - hypothetical protein gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2268 TDE2269 TDE2269 TDE2269 2305021 2306010 - hypothetical protein identified by similarity to GP:2429097%3B match to protein family HMM PF03781 gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2269 TDE2270 TDE2270 TDE2270 2306370 2308469 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2270 TDE2271 TDE2271 TDE2271 2308571 2309155 - HAM1 protein identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042 gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2271 TDE2272 TDE2272 TDE2272 2309070 2310098 - hypothetical protein gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2272 TDE2273 TDE2273 TDE2273 2310120 2310212 + hypothetical protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2273 TDE2274 TDE2274 TDE2274 2310341 2311216 + hypothetical protein identified by similarity to OMNI:TP0829%3B match to protein family HMM PF04460 gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2274 TDE2275 TDE2275 truA truA 2311216 2312022 + tRNA pseudouridine synthase A mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2275 TDE2276 TDE2276 TDE2276 2312035 2312766 - hypothetical protein gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2276 TDE2277 TDE2277 TDE2277 2312820 2313575 + Sir2 family transcriptional regulator identified by match to protein family HMM PF02146 gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2277 TDE2278 TDE2278 TDE2278 2313638 2313901 + hypothetical protein gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2278 TDE2279 TDE2279 TDE2279 2313871 2315361 + hypothetical protein identified by match to protein family HMM PF01966 gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2279 TDE2280 TDE2280 TDE2280 2315382 2317448 - Slt family transglycosylase identified by match to protein family HMM PF01464 gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2280 TDE2281 TDE2281 TDE2281 2317510 2318583 - LysM domain-containing protein identified by match to protein family HMM PF01476 gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2281 TDE2282 TDE2282 TDE2282 2318718 2319755 - tRNA synthetase%2C class II identified by match to protein family HMM PF00152 gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2282 TDE2283 TDE2283 TDE2283 2319769 2321007 - permease identified by match to protein family HMM PF02687 gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2283 TDE2284 TDE2284 TDE2284 2321015 2321986 - RND family efflux transporter MFP subunit identified by similarity to OMNI:TP0965%3B match to protein family HMM TIGR01730 gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2284 TDE2285 TDE2285 TDE2285 2321987 2323399 - hypothetical protein identified by similarity to SP:O83932 gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2285 TDE2286 TDE2286 TDE2286 2323494 2324339 + nucleoside triphosphate pyrophosphohydrolase MazG identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444 gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2286 TDE2287 TDE2287 TDE2287 2324399 2325148 - FKBP-type peptidyl-prolyl cis-trans isomerase identified by match to protein family HMM PF00254%3B match to protein family HMM PF01346 gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2287 TDE2288 TDE2288 TDE2288 2325252 2325734 - hypothetical protein gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2288 TDE2289 TDE2289 TDE2289 2325904 2327556 + phosphoribulokinase/uridine kinase identified by match to protein family HMM PF00485 gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2289 TDE2290 TDE2290 TDE2290 2327617 2328243 + transcriptional regulator identified by match to protein family HMM PF02559 gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2290 TDE2291 TDE2291 ispD ispD 2328230 2328961 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase identified by match to protein family HMM PF01128 gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2291 TDE2292 TDE2292 ispF ispF 2328958 2329443 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase identified by similarity to SP:P36663%3B match to protein family HMM PF02542%3B match to protein family HMM TIGR00151 gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2292 TDE2293 TDE2293 TDE2293 2329415 2332660 - hypothetical protein identified by similarity to OMNI:TP0408%3B match to protein family HMM TIGR01612%3B match to protein family HMM TIGR01967 gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2293 TDE2294 TDE2294 TDE2294 2332699 2333400 - HAD superfamily hydrolase identified by match to protein family HMM PF00702 gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2294 TDE2295 TDE2295 TDE2295 2333474 2334343 + mechanosensitive ion channel identified by match to protein family HMM PF00924 gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2295 TDE2296 TDE2296 TDE2296 2334373 2336427 - hypothetical protein identified by similarity to OMNI:TP0421%3B match to protein family HMM PF01436 gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2296 TDE2297 TDE2297 TDE2297 2336429 2337109 - TPR identified by match to protein family HMM PF00515 gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2297 TDE2298 TDE2298 TDE2298 2337203 2338357 - galactokinase identified by similarity to SP:P39574%3B match to protein family HMM PF00288 gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2298 TDE2299 TDE2299 lnt lnt 2338420 2339997 + apolipoprotein N-acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2299 TDE2300 TDE2300 TDE2300 2340043 2341524 - trypsin domain/PDZ identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595 gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2300 TDE2301 TDE2301 TDE2301 2341649 2341912 + protein FlhB gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2301 TDE2302 TDE2302 TDE2302 2341930 2343195 + hypothetical protein identified by match to protein family HMM PF01966 gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2302 TDE2303 TDE2303 TDE2303 2343195 2343587 + hypothetical protein identified by similarity to SP:O83883%3B match to protein family HMM PF02021 gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2303 TDE2304 TDE2304 TDE2304 2343580 2343795 + hypothetical protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2304 TDE2305 TDE2305 TDE2305 2343792 2344244 + hypothetical protein identified by similarity to OMNI:BB0701 gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2305 TDE2306 TDE2306 TDE2306 2344228 2344341 - hypothetical protein gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2306 TDE2307 TDE2307 serS serS 2344325 2345593 - seryl-tRNA synthetase catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2307 TDE2308 TDE2308 TDE2308 2345744 2346373 + hypothetical protein gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2308 TDE2309 TDE2309 TDE2309 2346648 2348189 - sigma-54 dependent transcriptional regulator identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM TIGR01199 gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2309 TDE2310 TDE2310 TDE2310 2348182 2348316 + hypothetical protein gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2310 TDE2311 TDE2311 TDE2311 2348378 2348497 + hypothetical protein gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2311 TDE2312 TDE2312 TDE2312 2348591 2349109 + hypothetical protein gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2312 TDE2313 TDE2313 TDE2313 2349596 2352100 - hypothetical protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2313 TDE2314 TDE2314 TDE2314 2352194 2352439 + hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2314 TDE2315 TDE2315 TDE2315 2352412 2353239 + hypothetical protein identified by similarity to OMNI:NTL01XF01718%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00044 gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2315 TDE2316 TDE2316 TDE2316 2353220 2354038 + hypothetical protein identified by similarity to SP:O83805 gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2316 TDE2317 TDE2317 hlyIII hlyIII 2354208 2354861 - hemolysin III identified by similarity to SP:P54176%3B match to protein family HMM PF03006%3B match to protein family HMM TIGR01065 gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2317 TDE2318 TDE2318 TDE2318 2355005 2355928 + LysM/M23/M37 peptidase identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551 gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2318 TDE2319 TDE2319 TDE2319 2355925 2356410 - hypothetical protein identified by similarity to GP:15022432 gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2319 TDE2320 TDE2320 TDE2320 2356400 2357041 - RNA polymerase sigma-24 factor identified by similarity to SP:P34086%3B match to protein family HMM PF04542 gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2320 TDE2321 TDE2321 TDE2321 2357038 2357391 - hypothetical protein identified by similarity to GP:15022430 gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2321 TDE2322 TDE2322 TDE2322 2357424 2357900 - flagellar protein FliL-like protein identified by similarity to SP:O07888%3B match to protein family HMM PF03748 gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2322 TDE2323 TDE2323 TDE2323 2357954 2359174 - mechanosensitive ion channel identified by similarity to SP:P39455%3B match to protein family HMM PF00924 gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2323 TDE2324 TDE2324 TDE2324 2359328 2359981 + DNA-binding response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196 gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2324 TDE2325 TDE2325 TDE2325 2360092 2361237 + hypothetical protein identified by similarity to OMNI:PG0327 gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2325 TDE2326 TDE2326 TDE2326 2361227 2362087 + cobyric acid synthase CobQ identified by similarity to SP:Q05597%3B match to protein family HMM PF01656 gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2326 TDE2327 TDE2327 clpB clpB 2362138 2364717 - ATP-dependent Clp protease%2C ATP-binding subunit ClpB identified by similarity to SP:Q9RA63%3B match to protein family HMM PF00004%3B match to protein family HMM PF02861 gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2327 TDE2328 TDE2328 mtrF mtrF 2364874 2366424 + efflux pump component MtrF identified by similarity to GP:6136036%3B match to protein family HMM PF03806 gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2328 TDE2329 TDE2329 TDE2329 2366437 2366583 - hypothetical protein gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2329 TDE2330 TDE2330 TDE2330 2366594 2366758 + hypothetical protein gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2330 TDE2331 TDE2331 TDE2331 2367265 2367628 - conserved hypothetical protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to OMNI:NTL03SP0471 gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2331 TDE2332 TDE2332 TDE2332 2367628 2367864 - hypothetical protein gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2332 TDE2333 TDE2333 TDE2333 2367961 2368641 - sanA protein identified by similarity to SP:P33017 gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2333 TDE2334 TDE2334 TDE2334 2368769 2369647 + hypothetical protein gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2334 TDE2335 TDE2335 TDE2335 2369781 2372018 + ATP-dependent DNA helicase UvrD identified by match to protein family HMM PF00580 gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2335 TDE2336 TDE2336 TDE2336 2372015 2373286 - sodium/dicarboxylate symporter identified by match to protein family HMM PF00375 gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2336 TDE2337 TDE2337 TDE2337 2373435 2374664 + aminopeptidase identified by similarity to SP:P39762%3B match to protein family HMM PF02073 gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2337 TDE2338 TDE2338 TDE2338 2374714 2374809 - hypothetical protein gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2338 TDE2339 TDE2339 leuS leuS 2374985 2377561 + leucyl-tRNA synthetase leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2339 TDE2340 TDE2340 TDE2340 2377583 2377945 - FMN-binding protein identified by match to protein family HMM PF04205 gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2340 TDE2341 TDE2341 TDE2341 2377956 2379308 - membrane-associated zinc metalloprotease identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054 gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2341 TDE2342 TDE2342 dxr dxr 2379328 2380473 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2342 TDE2343 TDE2343 cdsA cdsA 2380473 2381330 - phosphatidate cytidylyltransferase identified by match to protein family HMM PF01148 gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2343 TDE2344 TDE2344 uppS uppS 2381352 2382035 - undecaprenyl diphosphate synthase identified by similarity to SP:O82827%3B match to protein family HMM PF01255%3B match to protein family HMM TIGR00055 gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2344 TDE2345 TDE2345 frr frr 2382036 2382593 - ribosome recycling factor identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496 gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2345 TDE2346 TDE2346 tsf tsf 2382677 2383519 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2346 TDE2347 TDE2347 rpsB rpsB 2383593 2384468 - 30S ribosomal protein S2 one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2347 TDE2348 TDE2348 maf maf 2384698 2385309 - maf protein identified by similarity to SP:Q02169%3B match to protein family HMM PF02545%3B match to protein family HMM TIGR00172 gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2348 TDE2349 TDE2349 TDE2349 2385326 2386030 - hypothetical protein identified by similarity to SP:O83617 gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2349 TDE2350 TDE2350 TDE2350 2386143 2386751 - lipoprotein identified by similarity to SP:O83516 gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2350 TDE2351 TDE2351 TDE2351 2386873 2387364 + hypothetical protein identified by similarity to SP:O83667 gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2351 TDE2352 TDE2352 flgK flgK 2387375 2389246 + flagellar hook-associated protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2352 TDE2353 TDE2353 TDE2353 2389269 2390516 + flagellar hook-associated protein FlgL With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2353 TDE2354 TDE2354 TDE2354 2390535 2390978 + flagellar assembly protein FliW binds to flagellin and appears to stabilize flagellin during flagella assembly gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2354 TDE2355 TDE2355 csrA csrA 2390978 2391205 + carbon storage regulator identified by match to protein family HMM PF02599%3B match to protein family HMM TIGR00202 gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2355 TDE2356 TDE2356 TDE2356 2391229 2392158 + iron compound ABC transporter periplasmic iron compound-binding protein identified by match to protein family HMM PF01497 gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2356 TDE2357 TDE2357 TDE2357 2392178 2393161 + iron compound ABC transporter permease identified by match to protein family HMM PF01032 gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2357 TDE2358 TDE2358 TDE2358 2393219 2394226 - hypothetical protein gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2358 TDE2359 TDE2359 TDE2359 2394243 2394872 - hypothetical protein identified by similarity to GP:15082276%3B match to protein family HMM PF02734 gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2359 TDE2360 TDE2360 TDE2360 2394882 2395889 - dihydroxyacetone kinase identified by match to protein family HMM PF02733 gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2360 TDE2361 TDE2361 TDE2361 2395899 2397056 - high-affinity branched chain amino acid ABC transporter amino acid-binding protein identified by match to protein family HMM PF01094 gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2361 TDE2362 TDE2362 TDE2362 2397053 2397562 - hypothetical protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2362 TDE2363 TDE2363 TDE2363 2397562 2398269 - high-affinity branched chain amino acid ABC transporter ATP-binding protein identified by similarity to SP:P22731%3B match to protein family HMM PF00005 gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2363 TDE2364 TDE2364 TDE2364 2398269 2399039 - high-affinity branched-chain amino acid ABC transporter ATP-binding protein identified by similarity to SP:P22730%3B match to protein family HMM PF00005 gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2364 TDE2365 TDE2365 TDE2365 2399020 2400039 - high-affinity branched-chain amino acid ABC transporter permease identified by similarity to SP:P22729%3B match to protein family HMM PF02653 gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2365 TDE2366 TDE2366 TDE2366 2400049 2400948 - high-affinity branched-chain amino acid ABC transporter permease identified by similarity to SP:P08340%3B match to protein family HMM PF02653 gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2366 TDE2367 TDE2367 TDE2367 2401220 2401864 + transcriptional regulator gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2367 TDE2368 TDE2368 TDE2368 2401870 2402331 + YbaK/prolyl-tRNA synthetase identified by match to protein family HMM PF04073 gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2368 TDE2369 TDE2369 TDE2369 2402432 2403529 + hypothetical protein identified by similarity to OMNI:NTL02SC4277 gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2369 TDE2370 TDE2370 TDE2370 2403530 2403667 + hypothetical protein gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2370 TDE2371 TDE2371 TDE2371 2403723 2404556 + iron-sulfur cluster-binding protein identified by match to protein family HMM PF00037 gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2371 TDE2372 TDE2372 TDE2372 2404651 2405259 + hypothetical protein identified by similarity to OMNI:NTL01BH1580 gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2372 TDE2373 TDE2373 TDE2373 2405263 2405862 + precorrin-6Y C5%2C15-methyltransferase identified by similarity to SP:Q05629%3B match to protein family HMM PF00590 gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2373 TDE2374 TDE2374 TDE2374 2405849 2406412 + precorrin-8W decarboxylase identified by similarity to SP:Q05632 gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2374 TDE2375 TDE2375 TDE2375 2406434 2406751 - hypothetical protein identified by similarity to SP:O83685 gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2375 TDE2376 TDE2376 TDE2376 2406751 2407617 - hypothetical protein identified by similarity to SP:O83684 gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2376 TDE2377 TDE2377 TDE2377 2407620 2407757 - hypothetical protein gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2377 TDE2378 TDE2378 TDE2378 2407859 2408797 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2378 TDE2379 TDE2379 TDE2379 2408809 2409948 + hypothetical protein identified by similarity to GP:15023762 gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2379 TDE2380 TDE2380 TDE2380 2409959 2411122 + hypothetical protein identified by similarity to GP:15023763 gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2380 TDE2381 TDE2381 TDE2381 2411209 2412357 + histidine kinase-related ATPase identified by match to protein family HMM PF02518 gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2381 TDE2382 TDE2382 cobU cobU 2412418 2412969 + cobinamide kinase/cobinamide phosphate guanyltransferase identified by similarity to SP:P46886%3B match to protein family HMM PF02283 gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2382 TDE2383 TDE2383 cobS cobS 2412966 2413748 + cobalamin 5'-phosphate synthase identified by similarity to SP:P36561%3B match to protein family HMM PF02654%3B match to protein family HMM TIGR00317 gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2383 TDE2384 TDE2384 TDE2384 2413766 2414356 + phosphoglycerate mutase identified by match to protein family HMM PF00300 gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2384 TDE2385 TDE2385 ddl ddl 2414439 2415545 + D-alanyl-alanine synthetase A D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2385 TDE2386 TDE2386 TDE2386 2415551 2416183 + hypothetical protein gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2386 TDE2387 TDE2387 malQ malQ 2416180 2417802 + 4-alpha-glucanotransferase identified by match to protein family HMM PF02446%3B match to protein family HMM TIGR00217 gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2387 TDE2388 TDE2388 clpP clpP 2417877 2418479 + ATP-dependent Clp protease proteolytic subunit hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2388 TDE2389 TDE2389 cobD cobD 2418438 2419511 - cobalamin biosynthesis protein CobD identified by similarity to SP:P21634%3B match to protein family HMM PF03186%3B match to protein family HMM TIGR00380 gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2389 TDE2390 TDE2390 TDE2390 2419605 2420648 - hypothetical protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2390 TDE2391 TDE2391 TDE2391 2420672 2421640 - peptidyl-prolyl cis-trans isomerase identified by match to protein family HMM PF00160%3B match to protein family HMM PF00254 gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2391 TDE2392 TDE2392 TDE2392 2421763 2422440 - hypothetical protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2392 TDE2393 TDE2393 TDE2393 2422538 2422648 + hypothetical protein gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2393 TDE2394 TDE2394 TDE2394 2422607 2422702 - hypothetical protein gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2394 TDE2395 TDE2395 TDE2395 2422834 2423544 - Jag protein identified by similarity to SP:Q01620%3B match to protein family HMM PF01424 gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2395 TDE2396 TDE2396 TDE2396 2423740 2425488 - inner membrane protein translocase component YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2396 TDE2397 TDE2397 TDE2397 2425523 2425654 - hypothetical protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2397 TDE2398 TDE2398 TDE2398 2425676 2425897 - hypothetical protein identified by similarity to OMNI:NTL01NM00512%3B match to protein family HMM PF01809%3B match to protein family HMM TIGR00278 gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2398 TDE2399 TDE2399 rnpA rnpA 2425894 2426250 - ribonuclease P protein component identified by match to protein family HMM TIGR00188 gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2399 TDE2400 TDE2400 rpmH rpmH 2426262 2426417 - 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2400 TDE2401 TDE2401 TDE2401 2426646 2427782 + hypothetical protein gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2401 TDE2402 TDE2402 TDE2402 2427831 2428724 + radical SAM protein identified by match to protein family HMM PF04055 gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2402 TDE2403 TDE2403 TDE2403 2428731 2429372 - metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2403 TDE2404 TDE2404 TDE2404 2429403 2430794 - RNA polymerase sigma-54 factor identified by similarity to SP:P24255%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963 gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2404 TDE2405 TDE2405 TDE2405 2430806 2432140 - hypothetical protein identified by similarity to OMNI:NTL01NS1087 gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2405 TDE2406 TDE2406 TDE2406 2432137 2433603 - TldD/PmbA identified by match to protein family HMM PF01523 gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2406 TDE2407 TDE2407 purF purF 2433734 2435197 - amidophosphoribosyltransferase identified by similarity to SP:P00497%3B match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134 gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2407 TDE2408 TDE2408 TDE2408 2435307 2435477 - hypothetical protein identified by similarity to OMNI:TP0360 gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2408 TDE2409 TDE2409 TDE2409 2435575 2436096 - hypothetical protein gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2409 TDE2410 TDE2410 TDE2410 2436123 2437337 - hemolysin identified by similarity to GP:1019859%3B match to protein family HMM PF00155 gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2410 TDE2411 TDE2411 glgP glgP 2437324 2439777 - glycogen phosphorylase identified by similarity to SP:P39123%3B match to protein family HMM PF00343 gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2411 TDE2412 TDE2412 TDE2412 2439885 2440352 - acetyltransferase identified by match to protein family HMM PF00583 gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2412 TDE2413 TDE2413 TDE2413 2440413 2441078 - hypothetical protein gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2413 TDE2414 TDE2414 TDE2414 2441111 2441710 - hypothetical protein gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2414 TDE2415 TDE2415 TDE2415 2441803 2442435 - hypothetical protein gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2415 TDE2416 TDE2416 TDE2416 2442446 2442889 - hypothetical protein gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2416 TDE2417 TDE2417 TDE2417 2442902 2443378 - nitroimidazole resistance protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2417 TDE2418 TDE2418 TDE2418 2443420 2443923 - hypothetical protein identified by similarity to OMNI:NTL02MA0977 gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2418 TDE2419 TDE2419 TDE2419 2444113 2444859 - hypothetical protein gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2419 TDE2420 TDE2420 TDE2420 2445050 2449324 - DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2420 TDE2421 TDE2421 rpoB rpoB 2449349 2452852 - DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2421 TDE2422 TDE2422 rplL rplL 2453001 2453390 - 50S ribosomal protein L7/L12 present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2422 TDE2423 TDE2423 rplJ rplJ 2453507 2454124 - 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2423 TDE2424 TDE2424 rplA rplA 2454127 2454807 - 50S ribosomal protein L1 in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2424 TDE2425 TDE2425 rplK rplK 2454809 2455240 - 50S ribosomal protein L11 binds directly to 23S ribosomal RNA gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2425 TDE2426 TDE2426 nusG nusG 2455332 2455889 - transcription antitermination protein NusG identified by similarity to SP:Q06795%3B match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922 gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2426 TDE2427 TDE2427 secE secE 2455893 2456072 - preprotein translocase subunit SecE forms a complex with SecY and SecG%3B SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2427 TDE2428 TDE2428 rpmG rpmG 2456212 2456382 - 50S ribosomal protein L33 in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2428 TDE2429 TDE2429 TDE2429 2456718 2458127 - hypothetical protein gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2429 TDE2430 TDE2430 TDE2430 2458124 2459263 - bacteriocin ABC transporter bacteriocin-binding protein gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2430 TDE2431 TDE2431 TDE2431 2459260 2461539 - bacteriocin ABC transporter ATP-binding/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412%3B match to protein family HMM TIGR01193 gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2431 TDE2432 TDE2432 TDE2432 2461554 2462624 + treponemal membrane protein identified by similarity to SP:P07643 gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2432 TDE2433 TDE2433 TDE2433 2462624 2463325 + treponemal membrane protein identified by similarity to SP:P29720 gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2433 TDE2434 TDE2434 TDE2434 2463390 2465747 - polysaccharide deacetylase identified by match to protein family HMM PF01522 gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2434 TDE2435 TDE2435 TDE2435 2465956 2466552 - hypothetical protein identified by similarity to SP:O83683 gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2435 TDE2436 TDE2436 TDE2436 2466742 2467506 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2436 TDE2437 TDE2437 TDE2437 2467508 2468047 - cyclic nucleotide binding identified by match to protein family HMM PF00027 gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2437 TDE2438 TDE2438 TDE2438 2468055 2469347 - hypothetical protein identified by similarity to OMNI:NTL01BH3343 gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2438 TDE2439 TDE2439 TDE2439 2469360 2470451 - hypothetical protein identified by similarity to OMNI:SAG1943%3B match to protein family HMM PF05343 gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2439 TDE2440 TDE2440 TDE2440 2470538 2472133 - ABC transporter ATP-binding/permease identified by match to protein family HMM PF00005 gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2440 TDE2441 TDE2441 TDE2441 2472446 2472586 - hypothetical protein gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2441 TDE2442 TDE2442 TDE2442 2472561 2473256 - surface protein identified by similarity to OMNI:TP0225 gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2442 TDE2443 TDE2443 TDE2443 2473325 2473549 - hypothetical protein gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2443 TDE2444 TDE2444 TDE2444 2473829 2474302 - hypothetical protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2444 TDE2445 TDE2445 TDE2445 2474422 2474727 + DNA-binding protein identified by match to protein family HMM PF01381 gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2445 TDE2446 TDE2446 TDE2446 2474864 2476339 - malate dehydrogenase identified by similarity to SP:P16468%3B match to protein family HMM PF00390%3B match to protein family HMM PF03949 gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2446 TDE2447 TDE2447 aroK aroK 2476410 2477018 - shikimate kinase identified by match to protein family HMM PF01202 gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2447 TDE2448 TDE2448 TDE2448 2477067 2477507 - hypothetical protein gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2448 TDE2449 TDE2449 TDE2449 2477550 2478956 - hypothetical protein identified by similarity to OMNI:NTL01TT1818%3B match to protein family HMM PF01871%3B match to protein family HMM TIGR00296 gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2449 TDE2450 TDE2450 TDE2450 2479045 2479947 + ankyrin repeat-containing protein identified by similarity to SP:O83515%3B match to protein family HMM PF00023 gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2450 TDE2451 TDE2451 queA queA 2479972 2481015 + S-adenosylmethionine--tRNA ribosyltransferase-isomerase identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113 gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2451 TDE2452 TDE2452 TDE2452 2481150 2481446 + hypothetical protein gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2452 TDE2453 TDE2453 TDE2453 2481577 2482161 + hypothetical protein identified by similarity to OMNI:NTL01FN1922 gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2453 TDE2454 TDE2454 TDE2454 2482441 2483466 - hypothetical protein gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2454 TDE2455 TDE2455 TDE2455 2483617 2484184 - conserved hypothetical protein%2C degenerate%3B this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error%3B identified by similarity to GP:8100659 gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2455 TDE2456 TDE2456 TDE2456 2484226 2484663 - hypothetical protein identified by similarity to OMNI:NTL01RS1927 gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2456 TDE2457 TDE2457 TDE2457 2484788 2485660 - hypothetical protein gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2457 TDE2458 TDE2458 TDE2458 2485754 2485909 + hypothetical protein gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2458 TDE2459 TDE2459 TDE2459 2485854 2486024 - hypothetical protein gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2459 TDE2460 TDE2460 TDE2460 2486123 2487289 + class V aminotransferase identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01977 gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2460 TDE2461 TDE2461 selD selD 2487286 2488350 - selenide%2C water dikinase Selenoprotein.identified by similarity to SP:P16456%3B match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00476 gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2461 TDE2462 TDE2462 TDE2462 2488395 2488514 - hypothetical protein gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2462 TDE2463 TDE2463 TDE2463 2488630 2489253 + hypothetical protein gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2463 TDE2464 TDE2464 TDE2464 2489283 2489429 + hypothetical protein gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2464 TDE2465 TDE2465 TDE2465 2489481 2489741 - hypothetical protein gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2465 TDE2466 TDE2466 TDE2466 2489741 2489950 - hypothetical protein identified by similarity to SP:O29695%3B match to protein family HMM PF01206 gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2466 TDE2467 TDE2467 TDE2467 2489971 2491020 - hypothetical protein identified by similarity to OMNI:NTL01MK0261 gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2467 TDE2468 TDE2468 TDE2468 2491045 2491245 + hypothetical protein gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2468 TDE2469 TDE2469 TDE2469 2491326 2492639 - hexokinase identified by match to protein family HMM PF03727 gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2469 TDE2470 TDE2470 metK metK 2492689 2493858 - S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2470 TDE2471 TDE2471 TDE2471 2493954 2495036 - hypothetical protein identified by similarity to GP:23326718%3B match to protein family HMM PF00892 gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2471 TDE2472 TDE2472 TDE2472 2495102 2496286 + ISTde1%2C transposase identified by similarity to SP:Q54513 gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2472 TDE2473 TDE2473 rpsU rpsU 2496438 2496647 + 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2473 TDE2474 TDE2474 TDE2474 2496692 2497186 - acetyltransferase identified by match to protein family HMM PF00583 gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2474 TDE2475 TDE2475 TDE2475 2497220 2498611 - MATE family transporter identified by similarity to OMNI:TP0901%3B match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2475 TDE2476 TDE2476 arcC arcC 2498611 2499540 - carbamate kinase catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2476 TDE2477 TDE2477 selA selA 2499663 2501009 + selenocysteine synthase catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2477 TDE2478 TDE2478 uvrC uvrC 2501013 2502971 + excinuclease ABC subunit C identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00194 gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2478 TDE2479 TDE2479 TDE2479 2502991 2503380 - hypothetical protein identified by similarity to GP:9107052 gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2479 TDE2480 TDE2480 htpG htpG 2503456 2505378 - heat shock protein 90 molecular chaperone gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2480 TDE2481 TDE2481 TDE2481 2505442 2505567 - hypothetical protein gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2481 TDE2482 TDE2482 TDE2482 2505676 2505882 + hypothetical protein gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2482 TDE2483 TDE2483 TDE2483 2505970 2506749 - hypothetical protein identified by similarity to OMNI:NTL01BH1810 gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2483 TDE2484 TDE2484 TDE2484 2506743 2507810 - hypothetical protein identified by similarity to GP:3341435 gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2484 TDE2485 TDE2485 TDE2485 2507993 2509213 - hypothetical protein identified by similarity to OMNI:EF2477 gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2485 TDE2486 TDE2486 TDE2486 2509377 2509931 + hypothetical protein gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2486 TDE2487 TDE2487 TDE2487 2509947 2510453 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2487 TDE2488 TDE2488 TDE2488 2510485 2511474 - HemK family modification methylase identified by match to protein family HMM TIGR00536 gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2488 TDE2489 TDE2489 prfA prfA 2511481 2512566 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2489 TDE2490 TDE2490 priA priA 2512793 2514775 - primosomal protein N' identified by match to protein family HMM PF00271%3B match to protein family HMM TIGR00595 gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2490 TDE2491 TDE2491 TDE2491 2514795 2515589 - DNA polymerase identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00758 gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2491 TDE2492 TDE2492 TDE2492 2515599 2516504 - hypothetical protein identified by similarity to SP:O83767 gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2492 TDE2493 TDE2493 TDE2493 2516835 2518454 - hypothetical protein identified by similarity to GP:2429097 gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2493 TDE2494 TDE2494 TDE2494 2518637 2518774 + hypothetical protein gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2494 TDE2495 TDE2495 TDE2495 2518825 2521143 - hypothetical protein identified by similarity to OMNI:NTL02MA4168%3B match to protein family HMM PF03781 gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2495 TDE2496 TDE2496 TDE2496 2521260 2521988 - methyl-accepting chemotaxis protein identified by match to protein family HMM PF00015 gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2496 TDE2497 TDE2497 TDE2497 2522072 2522173 - hypothetical protein gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2497 TDE2498 TDE2498 TDE2498 2522284 2523051 - metallo-beta-lactamase identified by match to protein family HMM PF00753 gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2498 TDE2499 TDE2499 TDE2499 2523281 2524042 - hypothetical protein identified by similarity to OMNI:NTL02SC0930 gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2499 TDE2500 TDE2500 TDE2500 2524042 2524596 - hypothetical protein identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383 gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2500 TDE2501 TDE2501 TDE2501 2524913 2525887 + response regulator identified by match to protein family HMM PF00072 gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2501 TDE2502 TDE2502 TDE2502 2525874 2527904 + sensor histidine kinase/response regulator identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518 gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2502 TDE2503 TDE2503 TDE2503 2527967 2529139 + hypothetical protein identified by similarity to GP:16422273 gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2503 TDE2504 TDE2504 gcp gcp 2529141 2530157 + DNA-binding/iron metalloprotein/AP endonuclease in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2504 TDE2505 TDE2505 TDE2505 2530265 2530681 + hypothetical protein gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2505 TDE2506 TDE2506 TDE2506 2530721 2531716 + radical SAM protein identified by match to protein family HMM PF04055 gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2506 TDE2507 TDE2507 TDE2507 2531733 2531825 - hypothetical protein gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2507 TDE2508 TDE2508 TDE2508 2531814 2533181 + hypothetical protein gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2508 TDE2509 TDE2509 TDE2509 2533328 2534212 + AraC family transcriptional regulator identified by match to protein family HMM PF00165 gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2509 TDE2510 TDE2510 TDE2510 2534322 2536055 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2510 TDE2511 TDE2511 TDE2511 2536057 2537724 + ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2511 TDE2512 TDE2512 TDE2512 2537793 2539166 + alcohol dehydrogenase identified by match to protein family HMM PF00171 gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2512 TDE2513 TDE2513 gidB gidB 2539184 2539948 + glucose-inhibited division protein B identified by similarity to SP:O66106%3B match to protein family HMM PF02527%3B match to protein family HMM TIGR00138 gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2513 TDE2514 TDE2514 TDE2514 2539945 2540622 - serine/threonine protein phosphatase identified by match to protein family HMM PF00149 gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2514 TDE2515 TDE2515 TDE2515 2541062 2542147 - hypothetical protein identified by similarity to GP:2429097%3B match to protein family HMM PF03781 gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2515 TDE2516 TDE2516 TDE2516 2542161 2542253 + hypothetical protein gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2516 TDE2517 TDE2517 radA radA 2542544 2543932 - DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2517 TDE2518 TDE2518 TDE2518 2543965 2544795 - nucleotide-binding protein identified by similarity to OMNI:NTL01FN0562 gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2518 TDE2519 TDE2519 TDE2519 2544929 2546539 - hypothetical protein identified by similarity to GP:5931989 gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2519 TDE2520 TDE2520 TDE2520 2546608 2547888 - hypothetical protein gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2520 TDE2521 TDE2521 TDE2521 2548045 2548164 - hypothetical protein gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2521 TDE2522 TDE2522 TDE2522 2548238 2550064 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2522 TDE2523 TDE2523 TDE2523 2550051 2550575 + hypothetical protein gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2523 TDE2524 TDE2524 TDE2524 2550596 2551867 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2524 TDE2525 TDE2525 TDE2525 2551925 2553673 - hypothetical protein identified by similarity to SP:O83900 gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2525 TDE2526 TDE2526 TDE2526 2553676 2555124 - hypothetical protein identified by similarity to SP:O51068 gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2526 TDE2527 TDE2527 TDE2527 2555539 2556309 - hypothetical protein identified by similarity to OMNI:BR1821%3B match to protein family HMM PF04536 gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2527 TDE2528 TDE2528 TDE2528 2556310 2557002 - hypothetical protein identified by similarity to OMNI:TP0570 gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2528 TDE2529 TDE2529 TDE2529 2557068 2557328 - hypothetical protein identified by similarity to OMNI:NTL01LL0640 gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2529 TDE2530 TDE2530 TDE2530 2557502 2558329 + radical SAM protein identified by match to protein family HMM PF04055 gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2530 TDE2531 TDE2531 TDE2531 2558381 2558605 + hypothetical protein identified by similarity to OMNI:MT2568 gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2531 TDE2532 TDE2532 TDE2532 2558586 2559017 + PilT identified by similarity to OMNI:NTL01TT2391%3B match to protein family HMM PF01850 gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2532 TDE2533 TDE2533 TDE2533 2559104 2560300 + hypothetical protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2533 TDE2534 TDE2534 nth nth 2560284 2560916 + endonuclease III identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083 gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2534 TDE2535 TDE2535 pyk pyk 2561032 2562447 + pyruvate kinase identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064 gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2535 TDE2536 TDE2536 TDE2536 2562460 2563401 + hypothetical protein identified by similarity to OMNI:TP0894 gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2536 TDE2537 TDE2537 TDE2537 2563406 2563918 + hypothetical protein gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2537 TDE2538 TDE2538 TDE2538 2563925 2564332 + hypothetical protein gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2538 TDE2539 TDE2539 TDE2539 2564364 2565248 - hypothetical protein identified by similarity to SP:Q8ZYE1 gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2539 TDE2540 TDE2540 TDE2540 2565285 2568071 - lipoprotein gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2540 TDE2541 TDE2541 TDE2541 2568305 2569249 + hypothetical protein identified by similarity to OMNI:NTL01PM0570 gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2541 TDE2542 TDE2542 TDE2542 2569531 2570916 - hypothetical protein identified by similarity to SP:P18164 gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2542 TDE2543 TDE2543 TDE2543 2570843 2571040 - hypothetical protein gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2543 TDE2544 TDE2544 TDE2544 2571025 2571126 - hypothetical protein gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2544 TDE2545 TDE2545 TDE2545 2571260 2571904 - hypothetical protein identified by similarity to SP:O83792 gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2545 TDE2546 TDE2546 TDE2546 2571967 2572851 - hypothetical protein identified by similarity to GP:20517171%3B match to protein family HMM PF02588 gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2546 TDE2547 TDE2547 TDE2547 2573017 2573244 + hypothetical protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2547 TDE2548 TDE2548 TDE2548 2573154 2573288 - hypothetical protein gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2548 TDE2549 TDE2549 TDE2549 2573425 2575524 + methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2549 TDE2550 TDE2550 TDE2550 2575610 2576305 - hypothetical protein identified by similarity to GP:23325832%3B match to protein family HMM PF01863 gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2550 TDE2551 TDE2551 TDE2551 2576302 2577372 - hypothetical protein gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2551 TDE2552 TDE2552 TDE2552 2577460 2579034 - ABC transporter ATP-binding protein/permease identified by similarity to SP:P27299%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2552 TDE2553 TDE2553 lysK lysK 2579137 2580723 - lysyl-tRNA synthetase class I%3B LysRS1%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2553 TDE2554 TDE2554 TDE2554 2580885 2581763 + heat shock protein 34 identified by match to protein family HMM PF01430 gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2554 TDE2555 TDE2555 cobH cobH 2581753 2582376 + precorrin-8X methylmutase identified by similarity to SP:P21638%3B match to protein family HMM PF02570 gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2555 TDE2556 TDE2556 TDE2556 2582406 2583251 - hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2556 TDE2557 TDE2557 TDE2557 2583336 2583473 - hypothetical protein gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2557 TDE2558 TDE2558 TDE2558 2583819 2585477 - ABC transporter ATP-binding protein/permease identified by similarity to SP:Q57538%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2558 TDE2559 TDE2559 TDE2559 2585474 2587294 - ABC transporter ATP-binding protein/permease identified by similarity to SP:P94366%3B match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2559 TDE2560 TDE2560 TDE2560 2587451 2588299 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2560 TDE2561 TDE2561 TDE2561 2588354 2589037 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2561 TDE2562 TDE2562 TDE2562 2589039 2589848 + cation ABC transporter permease identified by similarity to GP:5019735%3B match to protein family HMM PF00950 gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2562 TDE2563 TDE2563 TDE2563 2589934 2590128 + hypothetical protein gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2563 TDE2564 TDE2564 TDE2564 2590115 2590453 + PemK protein identified by match to protein family HMM PF02452 gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2564 TDE2565 TDE2565 TDE2565 2590482 2591363 - hypothetical protein gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2565 TDE2566 TDE2566 TDE2566 2591422 2594277 - hypothetical protein identified by similarity to SP:O83637 gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2566 TDE2567 TDE2567 TDE2567 2594288 2595166 - hypothetical protein gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2567 TDE2568 TDE2568 thiI thiI 2595282 2596445 + thiamine biosynthesis protein ThiI Required for the synthesis of the thiazole moiety gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2568 TDE2569 TDE2569 aroF aroF 2596448 2597518 + phospho-2-dehydro-3-deoxyheptonate aldolase catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2569 TDE2570 TDE2570 rnhA rnhA 2597515 2597997 + ribonuclease HI identified by similarity to SP:P00647%3B match to protein family HMM PF00075 gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2570 TDE2571 TDE2571 TDE2571 2598012 2598242 - hypothetical protein identified by similarity to SP:O83371 gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2571 TDE2572 TDE2572 pgsA pgsA 2598235 2598828 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560 gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2572 TDE2573 TDE2573 pgi pgi 2598942 2600519 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2573 TDE2574 TDE2574 TDE2574 2600516 2601154 + hypothetical protein identified by match to protein family HMM TIGR00650 gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2574 TDE2575 TDE2575 TDE2575 2601158 2601772 + hypothetical protein identified by similarity to OMNI:NTL01SPL1630 gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2575 TDE2576 TDE2576 TDE2576 2601812 2602546 + RNA pseudouridylate synthase identified by match to protein family HMM PF00849 gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2576 TDE2577 TDE2577 TDE2577 2602580 2602993 - hypothetical protein identified by similarity to OMNI:NTL01TT0993 gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2577 TDE2578 TDE2578 TDE2578 2602990 2603244 - hypothetical protein gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2578 TDE2579 TDE2579 recG recG 2603378 2605414 - ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2579 TDE2580 TDE2580 TDE2580 2605586 2610910 + diguanylate cyclase identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254%3B match to protein family HMM TIGR01612 gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2580 TDE2581 TDE2581 TDE2581 2610922 2611692 + hypothetical protein gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2581 TDE2582 TDE2582 TDE2582 2611929 2616224 + diguanylate cyclase identified by similarity to GP:15025648%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254%3B match to protein family HMM TIGR01612 gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2582 TDE2583 TDE2583 TDE2583 2616462 2616560 + hypothetical protein gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2583 TDE2584 TDE2584 TDE2584 2616553 2618004 + dipeptidase identified by similarity to SP:Q9CFC3%3B match to protein family HMM PF03577 gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2584 TDE2585 TDE2585 TDE2585 2618066 2620393 - hypothetical protein identified by similarity to OMNI:TP0040%3B match to protein family HMM PF00015 gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2585 TDE2586 TDE2586 TDE2586 2620341 2622179 - DNA polymerase III subunits gamma and tau catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2586 TDE2587 TDE2587 TDE2587 2622331 2623350 + endonuclease/exonuclease/phosphatase identified by match to protein family HMM PF03372 gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2587 TDE2588 TDE2588 TDE2588 2623636 2624838 + integrase identified by match to protein family HMM PF00665 gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2588 TDE2589 TDE2589 TDE2589 2625090 2626496 - aminopeptidase 1 catalyzes the removal of amino acids from the N termini of peptides gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2589 TDE2590 TDE2590 TDE2590 2626622 2626735 + hypothetical protein gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2590 TDE2591 TDE2591 TDE2591 2626710 2627069 + rhodanese-like protein identified by match to protein family HMM PF00581 gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2591 TDE2592 TDE2592 TDE2592 2627166 2627792 + DbpA RNA-binding identified by match to protein family HMM PF03880 gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2592 TDE2593 TDE2593 TDE2593 2627887 2629023 + sigma-54-binding protein identified by match to protein family HMM PF00158 gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2593 TDE2594 TDE2594 TDE2594 2629020 2630120 - hypothetical protein identified by similarity to OMNI:TP0944%3B match to protein family HMM PF00515 gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2594 TDE2595 TDE2595 TDE2595 2630124 2631170 - hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2595 TDE2596 TDE2596 TDE2596 2631167 2632129 - hypothetical protein gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2596 TDE2597 TDE2597 rpe rpe 2632126 2632755 - ribulose-phosphate 3-epimerase identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163 gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2597 TDE2598 TDE2598 TDE2598 2632809 2633420 - hypothetical protein identified by similarity to OMNI:TP0258 gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2598 TDE2599 TDE2599 tmk tmk 2633424 2634053 - thymidylate kinase identified by similarity to SP:O83373%3B match to protein family HMM PF02223%3B match to protein family HMM TIGR00041 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2599 TDE2600 TDE2600 TDE2600 2634098 2638615 + hypothetical protein identified by similarity to OMNI:BB0794%3B match to protein family HMM PF04357%3B match to protein family HMM TIGR01612 gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2600 TDE2601 TDE2601 TDE2601 2638630 2641086 + surface antigen identified by similarity to GP:7381330%3B match to protein family HMM PF01103 gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2601 TDE2602 TDE2602 TDE2602 2641096 2641623 + outer membrane protein identified by similarity to SP:P31519%3B match to protein family HMM PF03938 gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2602 TDE2603 TDE2603 mutS mutS 2641616 2644291 + DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2603 TDE2604 TDE2604 TDE2604 2644314 2645864 - hypothetical protein gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2604 TDE2605 TDE2605 TDE2605 2645958 2646500 + phosphoglycerate mutase identified by match to protein family HMM PF00300 gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2605 TDE2606 TDE2606 hutU hutU 2646587 2648611 + urocanate hydratase catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2606 TDE2607 TDE2607 TDE2607 2648726 2649394 + hypothetical protein identified by similarity to OMNI:TP0333 gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2607 TDE2608 TDE2608 TDE2608 2649415 2650533 + hypothetical protein gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2608 TDE2609 TDE2609 TDE2609 2650561 2651964 + tRNA modifying protein identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125 gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2609 TDE2610 TDE2610 TDE2610 2651944 2652060 - hypothetical protein gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2610 TDE2611 TDE2611 TDE2611 2652120 2654339 + hypothetical protein identified by similarity to SP:O83602 gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2611 TDE2612 TDE2612 TDE2612 2654347 2655519 + hypothetical protein identified by similarity to OMNI:TP0592 gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2612 TDE2613 TDE2613 TDE2613 2655512 2655916 + hypothetical protein identified by similarity to OMNI:NTL01TA00401 gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2613 TDE2614 TDE2614 TDE2614 2656108 2657223 - ApbE identified by match to protein family HMM PF02424 gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2614 TDE2615 TDE2615 lspA lspA 2657236 2657757 - signal peptidase II lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2615 TDE2616 TDE2616 TDE2616 2657770 2658429 - cyclic nucleotide-binding protein identified by match to protein family HMM PF00027 gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2616 TDE2617 TDE2617 TDE2617 2658433 2659434 - cyclic nucleotide-binding protein identified by match to protein family HMM PF00027%3B match to protein family HMM PF00515 gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2617 TDE2618 TDE2618 TDE2618 2659532 2660407 + phosphotransferase identified by similarity to OMNI:NTL01NM00595%3B match to protein family HMM PF02231 gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2618 TDE2619 TDE2619 TDE2619 2660420 2661634 + RNA methyltransferase identified by match to protein family HMM PF01938 gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2619 TDE2620 TDE2620 TDE2620 2661678 2662097 + hypothetical protein identified by similarity to GP:19714407 gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2620 TDE2621 TDE2621 TDE2621 2662111 2662257 + hypothetical protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2621 TDE2622 TDE2622 TDE2622 2662268 2663680 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2622 TDE2623 TDE2623 TDE2623 2663674 2664414 - hypothetical protein identified by similarity to GP:23325909 gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2623 TDE2624 TDE2624 TDE2624 2664411 2664995 - hypothetical protein identified by similarity to OMNI:NTL02SP1290 gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2624 TDE2625 TDE2625 TDE2625 2665015 2666754 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2625 TDE2626 TDE2626 TDE2626 2666747 2668492 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2626 TDE2627 TDE2627 TDE2627 2668622 2669230 - TetR family transcriptional regulator identified by match to protein family HMM PF00440 gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2627 TDE2628 TDE2628 TDE2628 2669208 2669402 + hypothetical protein gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2628 TDE2629 TDE2629 TDE2629 2669469 2671022 + peptide ABC transporter periplasmic peptide-binding protein identified by match to protein family HMM PF00496 gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2629 TDE2630 TDE2630 TDE2630 2671019 2671972 + peptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2630 TDE2631 TDE2631 TDE2631 2671969 2672793 + peptide ABC transporter permease identified by match to protein family HMM PF00528 gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2631 TDE2632 TDE2632 TDE2632 2672790 2674484 + peptide ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2632 TDE2633 TDE2633 TDE2633 2674499 2674762 + hypothetical protein identified by similarity to OMNI:NTL01FN0782 gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2633 TDE2634 TDE2634 TDE2634 2674765 2675571 + hypothetical protein identified by similarity to OMNI:NTL01FN0783 gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2634 TDE2635 TDE2635 TDE2635 2675593 2676093 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2635 TDE2636 TDE2636 TDE2636 2676210 2676809 + hypothetical protein gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2636 TDE2637 TDE2637 TDE2637 2676882 2677406 - hypothetical protein identified by similarity to OMNI:NTL01NS1164 gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2637 TDE2638 TDE2638 TDE2638 2677633 2678259 + hypothetical protein gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2638 TDE2639 TDE2639 pepF pepF 2678260 2680149 + oligoendopeptidase F identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR00181 gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2639 TDE2640 TDE2640 TDE2640 2680174 2681091 + hypothetical protein gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2640 TDE2641 TDE2641 TDE2641 2681142 2682128 + Fic identified by match to protein family HMM PF02661 gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2641 TDE2642 TDE2642 TDE2642 2682201 2682344 - hypothetical protein gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2642 TDE2643 TDE2643 TDE2643 2682325 2683794 + oxidoreductase%2C FAD-dependent identified by match to protein family HMM PF01266%3B match to protein family HMM PF04324 gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2643 TDE2644 TDE2644 TDE2644 2683791 2685119 + pyridine nucleotide-disulfide oxidoreductase identified by match to protein family HMM PF00070 gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2644 TDE2645 TDE2645 TDE2645 2685112 2685504 + hypothetical protein identified by similarity to OMNI:NTL03CP2549 gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2645 TDE2646 TDE2646 TDE2646 2685488 2686090 + ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2646 TDE2647 TDE2647 TDE2647 2686092 2687087 - lipoyltransferase and lipoate-protein ligase identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545 gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2647 TDE2648 TDE2648 TDE2648 2687172 2687867 - hypothetical protein gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2648 TDE2649 TDE2649 TDE2649 2687869 2688738 - ABC transporter ATP-binding protein identified by match to protein family HMM PF00005 gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2649 TDE2650 TDE2650 TDE2650 2688756 2689121 - transcriptional regulator identified by match to protein family HMM PF00392 gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2650 TDE2651 TDE2651 TDE2651 2689289 2690278 + ABC transporter ATP-binding protein identified by similarity to OMNI:NTL02SP0557%3B match to protein family HMM PF00005 gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2651 TDE2652 TDE2652 TDE2652 2690275 2691030 + hypothetical protein identified by similarity to OMNI:NTL03CP0181 gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2652 TDE2653 TDE2653 TDE2653 2691031 2691804 + hypothetical protein gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2653 TDE2654 TDE2654 TDE2654 2691815 2693059 + macrolide efflux protein identified by similarity to GP:18478330 gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2654 TDE2655 TDE2655 TDE2655 2693053 2693160 - hypothetical protein gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2655 TDE2656 TDE2656 cbiK cbiK 2693205 2693960 + cobalt chelatase identified by similarity to SP:Q05592 gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2656 TDE2657 TDE2657 TDE2657 2693962 2694630 + precorrin-2 C(20)-methyltransferase identified by similarity to SP:Q05593%3B match to protein family HMM PF00590 gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2657 TDE2658 TDE2658 TDE2658 2694634 2695923 + cobyrinic acid a%2Cc-diamide synthase identified by similarity to SP:P29946%3B match to protein family HMM PF01656 gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2658 TDE2659 TDE2659 TDE2659 2695990 2697243 + GAF domain/HD identified by match to protein family HMM PF01590%3B match to protein family HMM PF01966 gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2659 TDE2660 TDE2660 TDE2660 2697248 2697607 - hypothetical protein identified by similarity to GP:2688597 gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2660 TDE2661 TDE2661 TDE2661 2697614 2697862 - hypothetical protein identified by similarity to OMNI:CT2097 gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2661 TDE2662 TDE2662 TDE2662 2697877 2698740 - lipoprotein identified by similarity to OMNI:TP0453 gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2662 TDE2663 TDE2663 ileS ileS 2698706 2702008 - isoleucyl-tRNA synthetase IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 2 subfamily%3B some organisms carry two different copies of this enzyme%3B in some organisms%2C the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2663 TDE2664 TDE2664 TDE2664 2702063 2702173 + hypothetical protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2664 TDE2665 TDE2665 guaB guaB 2702157 2703671 + inosine 5-monophosphate dehydrogenase catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2665 TDE2666 TDE2666 TDE2666 2703753 2704484 - carbon-nitrogen family hydrolase identified by match to protein family HMM PF00795 gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2666 TDE2667 TDE2667 TDE2667 2704514 2704639 + hypothetical protein gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2667 TDE2668 TDE2668 glyA glyA 2704636 2706156 - serine hydroxymethyltransferase catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2668 TDE2669 TDE2669 TDE2669 2706251 2707033 - CDP-alcohol phosphatidyltransferase identified by match to protein family HMM PF01066 gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2669 TDE2670 TDE2670 TDE2670 2707057 2708124 - glycosyl transferase%2C group 4 identified by match to protein family HMM PF00953 gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2670 TDE2671 TDE2671 TDE2671 2708233 2710182 - hypothetical protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2671 TDE2672 TDE2672 TDE2672 2710350 2711690 + TPR identified by similarity to OMNI:TP0915%3B match to protein family HMM PF00515 gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2672 TDE2673 TDE2673 TDE2673 2711760 2712467 - hypothetical protein gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2673 TDE2674 TDE2674 TDE2674 2712555 2713367 - hypothetical protein gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2674 TDE2675 TDE2675 TDE2675 2713514 2714404 + hypothetical protein identified by similarity to OMNI:NTL01MM0181 gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2675 TDE2676 TDE2676 TDE2676 2714425 2715738 + threonine synthase catalyzes the formation of L-threonine from O-phospho-L-homoserine gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2676 TDE2677 TDE2677 TDE2677 2715744 2715878 + hypothetical protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2677 TDE2678 TDE2678 TDE2678 2715875 2719480 - alpha-amylase identified by match to protein family HMM PF00128%3B match to protein family HMM TIGR01612 gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2678 TDE2679 TDE2679 TDE2679 2719658 2720542 + hypothetical protein identified by similarity to OMNI:NTL01BH1587 gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2679 TDE2680 TDE2680 TDE2680 2720539 2721162 - hypothetical protein identified by similarity to SP:O83709 gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2680 TDE2681 TDE2681 TDE2681 2721159 2721497 - hypothetical protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2681 TDE2682 TDE2682 TDE2682 2721478 2723448 - hypothetical protein identified by similarity to OMNI:TP0710%3B match to protein family HMM PF03961 gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2682 TDE2683 TDE2683 fliA fliA 2723457 2724245 - RNA polymerase sigma factor WhiG involved in the initiation of sporulation and glycogen biosynthesis gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2683 TDE2684 TDE2684 TDE2684 2724270 2724938 - hypothetical protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2684 TDE2685 TDE2685 fleN fleN 2724986 2725873 - flagellar synthesis regulator FleN identified by similarity to OMNI:NTL03PA01455%3B match to protein family HMM PF00991 gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2685 TDE2686 TDE2686 flhF flhF 2725875 2727215 - flagellar biosynthetic protein FlhF identified by similarity to SP:Q56339%3B match to protein family HMM PF00448 gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2686 TDE2687 TDE2687 TDE2687 2727286 2728344 - L-threonine-O-3-phosphate decarboxylase identified by similarity to GP:1895094%3B match to protein family HMM PF00155 gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2687 TDE2688 TDE2688 TDE2688 2728397 2728522 + hypothetical protein gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2688 TDE2689 TDE2689 TDE2689 2728516 2728908 + hypothetical protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2689 TDE2690 TDE2690 TDE2690 2728833 2728988 - hypothetical protein gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2690 TDE2691 TDE2691 TDE2691 2728978 2729406 + hypothetical protein gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2691 TDE2692 TDE2692 pyrG pyrG 2729561 2731171 + CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2692 TDE2693 TDE2693 TDE2693 2731273 2734074 + ankyrin repeat-containing protein identified by similarity to OMNI:TP0835%3B match to protein family HMM PF00023 gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2693 TDE2694 TDE2694 TDE2694 2734169 2736391 - hypothetical protein identified by similarity to OMNI:TP0020 gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2694 TDE2695 TDE2695 TDE2695 2736464 2739169 - transcript cleavage factor/unknown domain fusion protein contains N-terminal domain of unknown function fused to transcription elongation factor%3B GreA is necessary for efficient RNA polymerization through arresting sites%3B cleaves the nascent transcript and allows resumption of transcription elongation gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2695 TDE2696 TDE2696 TDE2696 2739188 2740126 - TPR identified by similarity to OMNI:TP0017%3B match to protein family HMM PF00515 gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2696 TDE2697 TDE2697 TDE2697 2740400 2741173 + 3-oxo-5-alpha-steroid 4-dehydrogenase identified by match to protein family HMM PF02544 gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2697 TDE2698 TDE2698 TDE2698 2741192 2742835 + hypothetical protein identified by similarity to SP:O83500 gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2698 TDE2699 TDE2699 TDE2699 2742856 2744523 + hypothetical protein identified by similarity to GP:436320 gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2699 TDE2700 TDE2700 TDE2700 2744536 2745828 + CCS family citrate carrier protein identified by match to protein family HMM PF03390 gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2700 TDE2701 TDE2701 TDE2701 2745829 2745921 + hypothetical protein gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2701 TDE2702 TDE2702 TDE2702 2745922 2747664 - hypothetical protein gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2702 TDE2703 TDE2703 TDE2703 2747695 2748480 - hypothetical protein identified by similarity to OMNI:PG1179 gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2703 TDE2704 TDE2704 TDE2704 2748473 2751169 - hypothetical protein identified by match to protein family HMM PF02460 gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2704 TDE2705 TDE2705 TDE2705 2751217 2751855 - ISTde3%2C transposase identified by similarity to GP:4102010 gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2705 TDE2706 TDE2706 TDE2706 2752006 2753883 - hypothetical protein gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2706 TDE2707 TDE2707 TDE2707 2754087 2754989 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2707 TDE2708 TDE2708 TDE2708 2755226 2761588 - hypothetical protein gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2708 TDE2709 TDE2709 TDE2709 2761784 2766448 - hypothetical protein identified by match to protein family HMM PF02012%3B match to protein family HMM TIGR01612 gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2709 TDE2710 TDE2710 TDE2710 2766670 2768034 + MATE family transporter identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797 gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2710 TDE2711 TDE2711 TDE2711 2768152 2769051 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2711 TDE2712 TDE2712 TDE2712 2769148 2769675 + hypothetical protein gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2712 TDE2713 TDE2713 TDE2713 2769647 2770414 - RNA methyltransferase identified by match to protein family HMM PF00588 gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2713 TDE2714 TDE2714 TDE2714 2770717 2772708 - hypothetical protein gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2714 TDE2715 TDE2715 TDE2715 2772808 2772996 + hypothetical protein gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2715 TDE2716 TDE2716 TDE2716 2773335 2773991 + HAD family hydrolase identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549 gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2716 TDE2717 TDE2717 TDE2717 2774011 2774637 - phosphatidate cytidylyltransferase identified by match to protein family HMM PF01148 gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2717 TDE2718 TDE2718 mgtE mgtE 2774642 2776000 - magnesium transporter identified by match to protein family HMM PF00571%3B match to protein family HMM PF01769%3B match to protein family HMM PF03448%3B match to protein family HMM TIGR00400 gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2718 TDE2719 TDE2719 TDE2719 2776185 2777075 + hypothetical protein identified by similarity to GP:21685499%3B match to protein family HMM TIGR01784 gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2719 TDE2720 TDE2720 TDE2720 2777086 2777922 - 16S ribosomal RNA methyltransferase RsmE in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2720 TDE2721 TDE2721 TDE2721 2777923 2779695 - helicase identified by match to protein family HMM PF00271 gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2721 TDE2722 TDE2722 TDE2722 2779756 2780964 - carbhohydrate kinase identified by match to protein family HMM PF00370 gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2722 TDE2723 TDE2723 prs prs 2780961 2782217 - phosphoribosylpyrophosphate synthetase Catalyzes the formation of PRPP from ATP and ribose 5-phosphate gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2723 TDE2724 TDE2724 TDE2724 2782244 2782342 + hypothetical protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2724 TDE2725 TDE2725 TDE2725 2782330 2783298 - cyclic nucleotide binding/GGDEF identified by match to protein family HMM PF00027%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2725 TDE2726 TDE2726 TDE2726 2783291 2784259 - cyclic nucleotide binding/GGDEF identified by match to protein family HMM PF00027%3B match to protein family HMM PF00990%3B match to protein family HMM TIGR00254 gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2726 TDE2727 TDE2727 TDE2727 2784341 2785435 - GTPase YjeQ identified by similarity to GP:16413842%3B match to protein family HMM PF03193 gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2727 TDE2728 TDE2728 TDE2728 2785747 2785875 + hypothetical protein gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2728 TDE2729 TDE2729 TDE2729 2785846 2786547 - hypothetical protein gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2729 TDE2730 TDE2730 TDE2730 2786726 2787499 + TatD family hydrolase identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010 gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2730 TDE2731 TDE2731 TDE2731 2787512 2788513 + NifR3 family TIM-barrel protein identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737 gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2731 TDE2732 TDE2732 TDE2732 2788588 2788680 + hypothetical protein gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2732 TDE2733 TDE2733 TDE2733 2788713 2789186 + hypothetical protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2733 TDE2734 TDE2734 TDE2734 2789211 2789921 + hypothetical protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2734 TDE2735 TDE2735 TDE2735 2790294 2791676 + surface antigen identified by similarity to GP:3005673 gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2735 TDE2736 TDE2736 TDE2736 2791792 2791902 - hypothetical protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2736 TDE2737 TDE2737 TDE2737 2792010 2792750 + hypothetical protein identified by similarity to GP:22090596 gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2737 TDE2738 TDE2738 TDE2738 2792903 2794633 + oligoendopeptidase F identified by match to protein family HMM PF01432 gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2738 TDE2739 TDE2739 TDE2739 2794813 2795229 + hypothetical protein identified by similarity to OMNI:NTL01ATA1545%3B match to protein family HMM PF00892 gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2739 TDE2740 TDE2740 TDE2740 2795342 2795830 + type I restriction-modification system%2C S subunit%2C truncation identified by match to protein family HMM PF01420 gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2740 TDE2741 TDE2741 TDE2741 2796003 2796782 + hypothetical protein identified by similarity to GP:3378342 gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2741 TDE2742 TDE2742 TDE2742 2796940 2797749 - phage integrase family site specific recombinase identified by match to protein family HMM PF00589 gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2742 TDE2743 TDE2743 TDE2743 2797810 2798337 + type I restriction-modification system%2C S subunit%2C truncation identified by match to protein family HMM PF01420 gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2743 TDE2744 TDE2744 hsdS hsdS 2798345 2799943 - type I restriction-modification system subunit S identified by match to protein family HMM PF01420 gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2744 TDE2745 TDE2745 TDE2745 2799971 2800786 - fic identified by match to protein family HMM PF02661 gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2745 TDE2746 TDE2746 hsdM-2 hsdM-2 2800783 2802225 - type I restriction-modification system%2C M subunit identified by similarity to SP:P08957%3B match to protein family HMM PF02384%3B match to protein family HMM PF02506 gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2746 TDE2747 TDE2747 hsdR-2 hsdR-2 2802228 2805032 - type I restriction-modification system%2C R subunit identified by similarity to SP:P08956%3B match to protein family HMM PF04313%3B match to protein family HMM TIGR01612 gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2747 TDE2748 TDE2748 TDE2748 2805248 2805706 + acetyltransferase identified by match to protein family HMM PF00583 gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2748 TDE2749 TDE2749 TDE2749 2805766 2806116 + hypothetical protein identified by similarity to GP:5912338%3B match to protein family HMM PF05534 gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2749 TDE2750 TDE2750 TDE2750 2806173 2807348 + GTP-binding protein HflX%2C truncation identified by similarity to SP:P25519%3B match to protein family HMM TIGR00231 gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2750 TDE2751 TDE2751 TDE2751 2807710 2809254 + hypothetical protein identified by similarity to OMNI:TP0996 gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2751 TDE2752 TDE2752 TDE2752 2809258 2809530 + hypothetical protein identified by similarity to OMNI:TP0072 gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2752 TDE2753 TDE2753 TDE2753 2809648 2810739 - LysM/M23/M37 peptidase identified by match to protein family HMM PF01476%3B match to protein family HMM PF01551 gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2753 TDE2754 TDE2754 arcB arcB 2810851 2811870 - ornithine cyclodeaminase catalyzes the formation of L-proline from L-ornithine gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2754 TDE2755 TDE2755 TDE2755 2811888 2812001 + hypothetical protein gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2755 TDE2756 TDE2756 TDE2756 2811988 2813607 - solute-binding family 5 protein identified by match to protein family HMM PF00496 gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2756 TDE2757 TDE2757 TDE2757 2813813 2814121 + nucleotidyltransferase identified by match to protein family HMM PF01909 gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2757 TDE2758 TDE2758 TDE2758 2814105 2814461 + hypothetical protein identified by similarity to OMNI:NTL01TT0695%3B match to protein family HMM PF01934 gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2758 TDE2759 TDE2759 TDE2759 2814451 2815161 + hypothetical protein gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2759 TDE2760 TDE2760 fliP fliP 2815156 2815971 - flagellar biosynthesis protein FliP FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2760 TDE2761 TDE2761 TDE2761 2815968 2816627 - hypothetical protein identified by similarity to OMNI:TP0719 gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2761 TDE2762 TDE2762 fliY fliY 2816653 2817834 - flagellar motor switch protein FliY identified by similarity to OMNI:TP0720%3B match to protein family HMM PF01052 gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2762 TDE2763 TDE2763 fliM fliM 2817827 2818861 - flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2763 TDE2764 TDE2764 fliL fliL 2818876 2819421 - flagellar basal body-associated protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2764 TDE2765 TDE2765 motB motB 2819464 2820183 - flagellar motor protein MotB with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2765 TDE2766 TDE2766 motA motA 2820185 2820964 - motility protein A identified by similarity to SP:Q56331%3B match to protein family HMM PF01618 gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2766 TDE2767 TDE2767 TDE2767 2820986 2821183 - flagellar protein-like protein identified by similarity to OMNI:TP0726 gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2767 TDE2768 TDE2768 flgE flgE 2821209 2822600 - flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2768 TDE2769 TDE2769 flgD flgD 2822613 2823122 - flagellar basal body rod modification protein acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2769 TDE2770 TDE2770 fliK fliK 2823134 2824507 - flagellar hook-length control protein FliK identified by match to protein family HMM PF02120 gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2770 TDE2771 TDE2771 TDE2771 2824859 2825710 + hypothetical protein identified by similarity to OMNI:NTL03CP0425%3B match to protein family HMM TIGR01784 gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2771 TDE2772 TDE2772 TDE2772 2825786 2825944 + ABC transporter ATP-binding protein%2C truncation identified by similarity to OMNI:NTL01TT0776 gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2772 TDE2773 TDE2773 TDE2773 2825913 2826053 - hypothetical protein gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2773 TDE2774 TDE2774 TDE2774 2826134 2826319 + hypothetical protein gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2774 TDE2775 TDE2775 TDE2775 2826336 2827190 + lipoprotein identified by similarity to OMNI:SP0899 gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2775 TDE2776 TDE2776 pip pip 2827504 2828445 + proline iminopeptidase identified by match to protein family HMM PF00561%3B match to protein family HMM TIGR01249 gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2776 TDE2777 TDE2777 TDE2777 2828452 2829411 + hypothetical protein identified by similarity to OMNI:TP0952 gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2777 TDE2778 TDE2778 TDE2778 2829461 2829694 - PspC protein identified by similarity to GP:15025688%3B match to protein family HMM PF04024 gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2778 TDE2779 TDE2779 TDE2779 2829718 2830515 - hypothetical protein gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2779 TDE2780 TDE2780 TDE2780 2830598 2830711 - hypothetical protein gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2780 TDE2781 TDE2781 TDE2781 2830729 2832558 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2781 TDE2782 TDE2782 TDE2782 2832576 2834366 - ABC transporter ATP-binding protein/permease identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664 gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2782 TDE2783 TDE2783 TDE2783 2834550 2836667 + methyl-accepting chemotaxis protein identified by similarity to OMNI:TP0488%3B match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF02743 gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2783 TDE2784 TDE2784 TDE2784 2836978 2838687 + hypothetical protein identified by similarity to SP:O83148 gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2784 TDE2785 TDE2785 TDE2785 2838691 2839272 - hypothetical protein identified by similarity to OMNI:TP0668%3B match to protein family HMM PF02325 gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2785 TDE2786 TDE2786 dnaE dnaE 2839313 2842762 - DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=TDE2786 TDE_16SA TDE_16SA rrsA rrsA 610211 611726 + 16S ribosomal RNA rRNA gene586 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_16SA TDE_16SB TDE_16SB rrsB rrsB 1219839 1221354 + 16S ribosomal RNA rRNA gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_16SB TDE_23SA TDE_23SA rrlA rrlA 612128 615037 + 23S ribosomal RNA rRNA gene588 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_23SA TDE_23SB TDE_23SB rrlB rrlB 1221739 1224648 + 23S ribosomal RNA rRNA gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_23SB TDE_5SA TDE_5SA rrfA rrfA 615208 615318 + 5S ribosomal RNA rRNA gene589 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_5SA TDE_5SB TDE_5SB rrfB rrfB 1224812 1224922 + 5S ribosomal RNA rRNA gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_5SB TDE_rnpB TDE_rnpB rnpB rnpB 1388132 1388457 + gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_rnpB TDE_tRNA-Ala-1 TDE_tRNA-Ala-1 TDE_tRNA-Ala-1 611869 611942 + tRNA-Ala tRNA gene587 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ala-1 TDE_tRNA-Ala-2 TDE_tRNA-Ala-2 TDE_tRNA-Ala-2 684725 684797 + tRNA-Ala tRNA gene660 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ala-2 TDE_tRNA-Ala-3 TDE_tRNA-Ala-3 TDE_tRNA-Ala-3 2807414 2807486 + tRNA-Ala tRNA gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ala-3 TDE_tRNA-Arg-1 TDE_tRNA-Arg-1 TDE_tRNA-Arg-1 250948 251021 - tRNA-Arg tRNA gene218 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Arg-1 TDE_tRNA-Arg-2 TDE_tRNA-Arg-2 TDE_tRNA-Arg-2 1949078 1949151 - tRNA-Arg tRNA gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Arg-2 TDE_tRNA-Arg-3 TDE_tRNA-Arg-3 TDE_tRNA-Arg-3 1960253 1960326 - tRNA-Arg tRNA gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Arg-3 TDE_tRNA-Arg-4 TDE_tRNA-Arg-4 TDE_tRNA-Arg-4 2346520 2346596 + tRNA-Arg tRNA gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Arg-4 TDE_tRNA-Asn-1 TDE_tRNA-Asn-1 TDE_tRNA-Asn-1 1018212 1018287 - tRNA-Asn tRNA gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Asn-1 TDE_tRNA-Asp-1 TDE_tRNA-Asp-1 TDE_tRNA-Asp-1 2616352 2616426 - tRNA-Asp tRNA gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Asp-1 TDE_tRNA-Cys-1 TDE_tRNA-Cys-1 TDE_tRNA-Cys-1 31732 31803 + tRNA-Cys tRNA gene25 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Cys-1 TDE_tRNA-Gln-1 TDE_tRNA-Gln-1 TDE_tRNA-Gln-1 1376314 1376386 + tRNA-Gln tRNA gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Gln-1 TDE_tRNA-Gln-2 TDE_tRNA-Gln-2 TDE_tRNA-Gln-2 2836733 2836803 + tRNA-Gln tRNA gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Gln-2 TDE_tRNA-Glu-1 TDE_tRNA-Glu-1 TDE_tRNA-Glu-1 1551533 1551604 + tRNA-Glu tRNA gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Glu-1 TDE_tRNA-Glu-2 TDE_tRNA-Glu-2 TDE_tRNA-Glu-2 2836822 2836893 + tRNA-Glu tRNA gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Glu-2 TDE_tRNA-Gly-1 TDE_tRNA-Gly-1 TDE_tRNA-Gly-1 1724894 1724965 + tRNA-Gly tRNA gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Gly-1 TDE_tRNA-Gly-2 TDE_tRNA-Gly-2 TDE_tRNA-Gly-2 1943843 1943914 + tRNA-Gly tRNA gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Gly-2 TDE_tRNA-His-1 TDE_tRNA-His-1 TDE_tRNA-His-1 1960359 1960430 - tRNA-His tRNA gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-His-1 TDE_tRNA-Ile-1 TDE_tRNA-Ile-1 TDE_tRNA-Ile-1 1221484 1221557 + tRNA-Ile tRNA gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ile-1 TDE_tRNA-Leu-1 TDE_tRNA-Leu-1 TDE_tRNA-Leu-1 884545 884626 + tRNA-Leu tRNA gene874 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Leu-1 TDE_tRNA-Leu-2 TDE_tRNA-Leu-2 TDE_tRNA-Leu-2 1724782 1724864 + tRNA-Leu tRNA gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Leu-2 TDE_tRNA-Leu-3 TDE_tRNA-Leu-3 TDE_tRNA-Leu-3 1795537 1795619 + tRNA-Leu tRNA gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Leu-3 TDE_tRNA-Leu-4 TDE_tRNA-Leu-4 TDE_tRNA-Leu-4 2058210 2058296 + tRNA-Leu tRNA gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Leu-4 TDE_tRNA-Leu-5 TDE_tRNA-Leu-5 TDE_tRNA-Leu-5 2623417 2623499 - tRNA-Leu tRNA gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Leu-5 TDE_tRNA-Lys-1 TDE_tRNA-Lys-1 TDE_tRNA-Lys-1 2555330 2555402 - tRNA-Lys tRNA gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Lys-1 TDE_tRNA-Lys-2 TDE_tRNA-Lys-2 TDE_tRNA-Lys-2 2682138 2682210 - tRNA-Lys tRNA gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Lys-2 TDE_tRNA-Met-1 TDE_tRNA-Met-1 TDE_tRNA-Met-1 1202619 1202691 - tRNA-Met tRNA gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Met-1 TDE_tRNA-Met-2 TDE_tRNA-Met-2 TDE_tRNA-Met-2 1395627 1395699 - tRNA-Met tRNA gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Met-2 TDE_tRNA-Met-3 TDE_tRNA-Met-3 TDE_tRNA-Met-3 2354124 2354197 + tRNA-Met tRNA gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Met-3 TDE_tRNA-Phe-1 TDE_tRNA-Phe-1 TDE_tRNA-Phe-1 1789641 1789713 + tRNA-Phe tRNA gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Phe-1 TDE_tRNA-Pro-1 TDE_tRNA-Pro-1 TDE_tRNA-Pro-1 1797908 1797981 - tRNA-Pro tRNA gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Pro-1 TDE_tRNA-Pro-2 TDE_tRNA-Pro-2 TDE_tRNA-Pro-2 2346434 2346506 + tRNA-Pro tRNA gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Pro-2 TDE_tRNA-Pro-3 TDE_tRNA-Pro-3 TDE_tRNA-Pro-3 2616226 2616297 - tRNA-Pro tRNA gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Pro-3 TDE_tRNA-Pseudo-1 TDE_tRNA-Pseudo-1 TDE_tRNA-Pseudo-1 250822 250906 - tRNA-OTHER tRNA-Pse tRNA gene217 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Pseudo-1 TDE_tRNA-Pseudo-2 TDE_tRNA-Pseudo-2 TDE_tRNA-Pseudo-2 251033 251119 - tRNA-OTHER tRNA-Pse tRNA gene219 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Pseudo-2 TDE_tRNA-SeC(p)-1 TDE_tRNA-SeC(p)-1 TDE_tRNA-SeC(p)-1 1090480 1090567 + tRNA-Sec tRNA gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-SeC(p)-1 TDE_tRNA-Ser-1 TDE_tRNA-Ser-1 TDE_tRNA-Ser-1 250688 250774 - tRNA-Ser tRNA gene216 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ser-1 TDE_tRNA-Ser-2 TDE_tRNA-Ser-2 TDE_tRNA-Ser-2 251146 251230 - tRNA-Ser tRNA gene220 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Ser-2 TDE_tRNA-Thr-1 TDE_tRNA-Thr-1 TDE_tRNA-Thr-1 1584328 1584402 + tRNA-Thr tRNA gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Thr-1 TDE_tRNA-Thr-2 TDE_tRNA-Thr-2 TDE_tRNA-Thr-2 1680012 1680084 - tRNA-Thr tRNA gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Thr-2 TDE_tRNA-Thr-3 TDE_tRNA-Thr-3 TDE_tRNA-Thr-3 2456424 2456496 - tRNA-Thr tRNA gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Thr-3 TDE_tRNA-Trp-1 TDE_tRNA-Trp-1 TDE_tRNA-Trp-1 2456096 2456168 - tRNA-Trp tRNA gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Trp-1 TDE_tRNA-Tyr-1 TDE_tRNA-Tyr-1 TDE_tRNA-Tyr-1 1584409 1584490 + tRNA-Tyr tRNA gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Tyr-1 TDE_tRNA-Val-1 TDE_tRNA-Val-1 TDE_tRNA-Val-1 1807238 1807311 + tRNA-Val tRNA gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Val-1 TDE_tRNA-Val-2 TDE_tRNA-Val-2 TDE_tRNA-Val-2 2079695 2079768 + tRNA-Val tRNA gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tRNA-Val-2 TDE_tmRNA TDE_tmRNA ssrA ssrA 246212 246562 - gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=TDE_tmRNA