locus-tag class description HO345_RS00005 PF00308 Bacterial dnaA protein HO345_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HO345_RS00005 PF11638 DnaA N-terminal domain HO345_RS00015 PF07733 Bacterial DNA polymerase III alpha NTPase domain HO345_RS00015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HO345_RS00015 PF14579 Helix-hairpin-helix motif HO345_RS00015 PF02811 PHP domain HO345_RS00025 PF17239 Family of unknown function (DUF5312) HO345_RS00045 PF00221 Aromatic amino acid lyase HO345_RS00050 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HO345_RS00055 PF01039 Carboxyl transferase domain HO345_RS00060 PF00289 Biotin carboxylase, N-terminal domain HO345_RS00060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HO345_RS00060 PF02785 Biotin carboxylase C-terminal domain HO345_RS00065 PF00364 Biotin-requiring enzyme HO345_RS00070 PF00270 DEAD/DEAH box helicase HO345_RS00070 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HO345_RS00070 PF17191 RecG wedge domain HO345_RS00080 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HO345_RS00080 PF12241 Trans-2-enoyl-CoA reductase catalytic region HO345_RS00080 PF07055 Enoyl reductase FAD binding domain HO345_RS00090 PF02384 N-6 DNA Methylase HO345_RS00100 PF00698 Acyl transferase domain HO345_RS00105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HO345_RS00105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HO345_RS00125 PF02195 ParB-like nuclease domain HO345_RS00125 PF17762 HTH domain found in ParB protein HO345_RS00130 PF13614 AAA domain HO345_RS00135 PF00270 DEAD/DEAH box helicase HO345_RS00135 PF17191 RecG wedge domain HO345_RS00135 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HO345_RS00140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HO345_RS00145 PF11761 Cobalamin biosynthesis central region HO345_RS00145 PF11760 Cobalamin synthesis G N-terminal HO345_RS00145 PF01890 Cobalamin synthesis G C-terminus HO345_RS00160 PF02743 Cache domain HO345_RS00160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS00160 PF00672 HAMP domain HO345_RS00170 PF01554 MatE HO345_RS00185 PF00005 ABC transporter HO345_RS00190 PF01458 Uncharacterized protein family (UPF0051) HO345_RS00200 PF10371 Domain of unknown function HO345_RS00200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HO345_RS00200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HO345_RS00200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HO345_RS00200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HO345_RS00205 PF00005 ABC transporter HO345_RS00205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS00210 PF00005 ABC transporter HO345_RS00210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS00215 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS00220 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS00225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS00250 PF06418 CTP synthase N-terminus HO345_RS00250 PF00117 Glutamine amidotransferase class-I HO345_RS00265 PF00155 Aminotransferase class I and II HO345_RS00270 PF00448 SRP54-type protein, GTPase domain HO345_RS00275 PF10609 NUBPL iron-transfer P-loop NTPase HO345_RS00285 PF04539 Sigma-70 region 3 HO345_RS00285 PF04542 Sigma-70 region 2 HO345_RS00285 PF04545 Sigma-70, region 4 HO345_RS00320 PF00291 Pyridoxal-phosphate dependent enzyme HO345_RS00350 PF01066 CDP-alcohol phosphatidyltransferase HO345_RS00355 PF00464 Serine hydroxymethyltransferase HO345_RS00365 PF00571 CBS domain HO345_RS00365 PF00478 IMP dehydrogenase / GMP reductase domain HO345_RS00395 PF03390 2-hydroxycarboxylate transporter family HO345_RS00415 PF09820 Predicted AAA-ATPase HO345_RS00415 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS00420 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HO345_RS00420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HO345_RS00425 PF02571 Precorrin-6x reductase CbiJ/CobK HO345_RS00430 PF00005 ABC transporter HO345_RS00445 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS00455 PF01025 GrpE HO345_RS00460 PF00012 Hsp70 protein HO345_RS00465 PF01556 DnaJ C terminal domain HO345_RS00465 PF00684 DnaJ central domain HO345_RS00465 PF00226 DnaJ domain HO345_RS00490 PF01545 Cation efflux family HO345_RS00490 PF16916 Dimerisation domain of Zinc Transporter HO345_RS00495 PF00005 ABC transporter HO345_RS00495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS00500 PF00005 ABC transporter HO345_RS00500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS00505 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS00515 PF02743 Cache domain HO345_RS00515 PF00672 HAMP domain HO345_RS00515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS00520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HO345_RS00530 PF01195 Peptidyl-tRNA hydrolase HO345_RS00535 PF12399 Branched-chain amino acid ATP-binding cassette transporter HO345_RS00535 PF00005 ABC transporter HO345_RS00550 PF03705 CheR methyltransferase, all-alpha domain HO345_RS00550 PF01739 CheR methyltransferase, SAM binding domain HO345_RS00555 PF00072 Response regulator receiver domain HO345_RS00555 PF01339 CheB methylesterase HO345_RS00575 PF03030 Inorganic H+ pyrophosphatase HO345_RS00590 PF07687 Peptidase dimerisation domain HO345_RS00590 PF01546 Peptidase family M20/M25/M40 HO345_RS00595 PF00072 Response regulator receiver domain HO345_RS00595 PF00486 Transcriptional regulatory protein, C terminal HO345_RS00600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS00605 PF00005 ABC transporter HO345_RS00625 PF08279 HTH domain HO345_RS00625 PF13280 WYL domain HO345_RS00650 PF00691 OmpA family HO345_RS00655 PF01624 MutS domain I HO345_RS00655 PF05192 MutS domain III HO345_RS00655 PF05190 MutS family domain IV HO345_RS00655 PF00488 MutS domain V HO345_RS00655 PF05188 MutS domain II HO345_RS00665 PF01103 Surface antigen HO345_RS00665 PF07244 Surface antigen variable number repeat HO345_RS00675 PF02223 Thymidylate kinase HO345_RS00685 PF00834 Ribulose-phosphate 3 epimerase family HO345_RS00705 PF00158 Sigma-54 interaction domain HO345_RS00705 PF02954 Bacterial regulatory protein, Fis family HO345_RS00705 PF02830 V4R domain HO345_RS00705 PF06505 Activator of aromatic catabolism HO345_RS00710 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS00715 PF00085 Thioredoxin HO345_RS00725 PF00005 ABC transporter HO345_RS00730 PF01032 FecCD transport family HO345_RS00740 PF02514 CobN/Magnesium Chelatase HO345_RS00745 PF17863 AAA lid domain HO345_RS00745 PF01078 Magnesium chelatase, subunit ChlI HO345_RS00745 PF13519 von Willebrand factor type A domain HO345_RS00750 PF17863 AAA lid domain HO345_RS00750 PF01078 Magnesium chelatase, subunit ChlI HO345_RS00770 PF03553 Na+/H+ antiporter family HO345_RS00775 PF00005 ABC transporter HO345_RS00780 PF01032 FecCD transport family HO345_RS00790 PF03143 Elongation factor Tu C-terminal domain HO345_RS00790 PF00009 Elongation factor Tu GTP binding domain HO345_RS00790 PF03144 Elongation factor Tu domain 2 HO345_RS00795 PF00338 Ribosomal protein S10p/S20e HO345_RS00800 PF00297 Ribosomal protein L3 HO345_RS00805 PF00573 Ribosomal protein L4/L1 family HO345_RS00810 PF00276 Ribosomal protein L23 HO345_RS00815 PF00181 Ribosomal Proteins L2, RNA binding domain HO345_RS00815 PF03947 Ribosomal Proteins L2, C-terminal domain HO345_RS00820 PF00203 Ribosomal protein S19 HO345_RS00825 PF00237 Ribosomal protein L22p/L17e HO345_RS00830 PF00189 Ribosomal protein S3, C-terminal domain HO345_RS00830 PF07650 KH domain HO345_RS00835 PF00252 Ribosomal protein L16p/L10e HO345_RS00840 PF00831 Ribosomal L29 protein HO345_RS00845 PF00366 Ribosomal protein S17 HO345_RS00850 PF00238 Ribosomal protein L14p/L23e HO345_RS00855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HO345_RS00855 PF00467 KOW motif HO345_RS00860 PF00281 Ribosomal protein L5 HO345_RS00860 PF00673 ribosomal L5P family C-terminus HO345_RS00865 PF00253 Ribosomal protein S14p/S29e HO345_RS00870 PF00410 Ribosomal protein S8 HO345_RS00875 PF00347 Ribosomal protein L6 HO345_RS00880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HO345_RS00885 PF00333 Ribosomal protein S5, N-terminal domain HO345_RS00885 PF03719 Ribosomal protein S5, C-terminal domain HO345_RS00890 PF00327 Ribosomal protein L30p/L7e HO345_RS00895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HO345_RS00900 PF00344 SecY translocase HO345_RS00905 PF00444 Ribosomal protein L36 HO345_RS00910 PF00416 Ribosomal protein S13/S18 HO345_RS00915 PF00411 Ribosomal protein S11 HO345_RS00920 PF01000 RNA polymerase Rpb3/RpoA insert domain HO345_RS00920 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HO345_RS00920 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HO345_RS00925 PF01196 Ribosomal protein L17 HO345_RS00950 PF00708 Acylphosphatase HO345_RS00960 PF03009 Glycerophosphoryl diester phosphodiesterase family HO345_RS00975 PF13649 Methyltransferase domain HO345_RS00980 PF02082 Transcriptional regulator HO345_RS00985 PF13460 NAD(P)H-binding HO345_RS01010 PF07728 AAA domain (dynein-related subfamily) HO345_RS01010 PF12102 Domain of unknown function (DUF3578) HO345_RS01025 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS01045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS01055 PF00664 ABC transporter transmembrane region HO345_RS01055 PF00005 ABC transporter HO345_RS01060 PF00664 ABC transporter transmembrane region HO345_RS01060 PF00005 ABC transporter HO345_RS01075 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS01075 PF09820 Predicted AAA-ATPase HO345_RS01080 PF00005 ABC transporter HO345_RS01080 PF00664 ABC transporter transmembrane region HO345_RS01085 PF04191 Phospholipid methyltransferase HO345_RS01090 PF00005 ABC transporter HO345_RS01090 PF00664 ABC transporter transmembrane region HO345_RS01100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HO345_RS01115 PF08361 MAATS-type transcriptional repressor, C-terminal region HO345_RS01115 PF00440 Bacterial regulatory proteins, tetR family HO345_RS01120 PF08021 Siderophore-interacting FAD-binding domain HO345_RS01120 PF00005 ABC transporter HO345_RS01120 PF00664 ABC transporter transmembrane region HO345_RS01120 PF04954 Siderophore-interacting protein HO345_RS01130 PF00664 ABC transporter transmembrane region HO345_RS01130 PF00005 ABC transporter HO345_RS01140 PF00005 ABC transporter HO345_RS01155 PF07977 FabA-like domain HO345_RS01165 PF08245 Mur ligase middle domain HO345_RS01165 PF01225 Mur ligase family, catalytic domain HO345_RS01165 PF02875 Mur ligase family, glutamate ligase domain HO345_RS01170 PF13932 GidA associated domain HO345_RS01170 PF01134 Glucose inhibited division protein A HO345_RS01175 PF02127 Aminopeptidase I zinc metalloprotease (M18) HO345_RS01190 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS01195 PF02508 Rnf-Nqr subunit, membrane protein HO345_RS01200 PF02508 Rnf-Nqr subunit, membrane protein HO345_RS01205 PF04205 FMN-binding domain HO345_RS01210 PF03116 NQR2, RnfD, RnfE family HO345_RS01215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HO345_RS01215 PF13237 4Fe-4S dicluster domain HO345_RS01215 PF10531 SLBB domain HO345_RS01215 PF13375 RnfC Barrel sandwich hybrid domain HO345_RS01225 PF13519 von Willebrand factor type A domain HO345_RS01240 PF00391 PEP-utilising enzyme, mobile domain HO345_RS01240 PF02896 PEP-utilising enzyme, TIM barrel domain HO345_RS01250 PF16314 Domain of unknown function (DUF4954) HO345_RS01265 PF00672 HAMP domain HO345_RS01265 PF02743 Cache domain HO345_RS01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS01275 PF00572 Ribosomal protein L13 HO345_RS01280 PF00380 Ribosomal protein S9/S16 HO345_RS01285 PF02631 RecX family HO345_RS01290 PF00196 Bacterial regulatory proteins, luxR family HO345_RS01290 PF00072 Response regulator receiver domain HO345_RS01295 PF00596 Class II Aldolase and Adducin N-terminal domain HO345_RS01315 PF00849 RNA pseudouridylate synthase HO345_RS01315 PF01479 S4 domain HO345_RS01320 PF00579 tRNA synthetases class I (W and Y) HO345_RS01335 PF03462 PCRF domain HO345_RS01335 PF00472 RF-1 domain HO345_RS01340 PF17827 PrmC N-terminal domain HO345_RS01340 PF05175 Methyltransferase small domain HO345_RS01370 PF02743 Cache domain HO345_RS01370 PF00672 HAMP domain HO345_RS01370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS01380 PF00183 Hsp90 protein HO345_RS01395 PF02308 MgtC family HO345_RS01400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HO345_RS01400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HO345_RS01400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HO345_RS01400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HO345_RS01420 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS01420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HO345_RS01430 PF00154 recA bacterial DNA recombination protein HO345_RS01435 PF02616 Segregation and condensation protein ScpA HO345_RS01440 PF04079 Segregation and condensation complex subunit ScpB HO345_RS01445 PF01479 S4 domain HO345_RS01445 PF00849 RNA pseudouridylate synthase HO345_RS01470 PF02527 rRNA small subunit methyltransferase G HO345_RS01475 PF00171 Aldehyde dehydrogenase family HO345_RS01480 PF00005 ABC transporter HO345_RS01480 PF00664 ABC transporter transmembrane region HO345_RS01485 PF00005 ABC transporter HO345_RS01485 PF00664 ABC transporter transmembrane region HO345_RS01490 PF12833 Helix-turn-helix domain HO345_RS01490 PF14525 AraC-binding-like domain HO345_RS01505 PF00814 Glycoprotease family HO345_RS01515 PF01627 Hpt domain HO345_RS01515 PF00072 Response regulator receiver domain HO345_RS01515 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HO345_RS01515 PF00672 HAMP domain HO345_RS01515 PF00512 His Kinase A (phospho-acceptor) domain HO345_RS01515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS01520 PF00072 Response regulator receiver domain HO345_RS01520 PF00486 Transcriptional regulatory protein, C terminal HO345_RS01530 PF08241 Methyltransferase domain HO345_RS01540 PF00672 HAMP domain HO345_RS01540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS01540 PF16591 Helical bimodular sensor domain HO345_RS01550 PF03167 Uracil DNA glycosylase superfamily HO345_RS01555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HO345_RS01555 PF18074 Primosomal protein N C-terminal domain HO345_RS01555 PF17764 3′ DNA-binding domain (3′BD) HO345_RS01555 PF00270 DEAD/DEAH box helicase HO345_RS01555 PF00271 Helicase conserved C-terminal domain HO345_RS01575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HO345_RS01575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HO345_RS01615 PF00224 Pyruvate kinase, barrel domain HO345_RS01615 PF00391 PEP-utilising enzyme, mobile domain HO345_RS01615 PF02887 Pyruvate kinase, alpha/beta domain HO345_RS01620 PF00730 HhH-GPD superfamily base excision DNA repair protein HO345_RS01635 PF00149 Calcineurin-like phosphoesterase HO345_RS01650 PF04536 TPM domain HO345_RS01665 PF01973 Protein of unknown function DUF115 HO345_RS01675 PF00005 ABC transporter HO345_RS01680 PF00005 ABC transporter HO345_RS01685 PF09820 Predicted AAA-ATPase HO345_RS01685 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS01690 PF10609 NUBPL iron-transfer P-loop NTPase HO345_RS01695 PF06745 KaiC HO345_RS01695 PF18073 Rubredoxin metal binding domain HO345_RS01710 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS01720 PF08459 UvrC Helix-hairpin-helix N-terminal HO345_RS01720 PF02151 UvrB/uvrC motif HO345_RS01720 PF01541 GIY-YIG catalytic domain HO345_RS01725 PF09820 Predicted AAA-ATPase HO345_RS01725 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS01730 PF12390 Selenocysteine synthase N terminal HO345_RS01730 PF03841 L-seryl-tRNA selenium transferase HO345_RS01735 PF00696 Amino acid kinase family HO345_RS01740 PF01554 MatE HO345_RS01745 PF13302 Acetyltransferase (GNAT) domain HO345_RS01750 PF01165 Ribosomal protein S21 HO345_RS01760 PF00497 Bacterial extracellular solute-binding proteins, family 3 HO345_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS01775 PF00005 ABC transporter HO345_RS01780 PF02772 S-adenosylmethionine synthetase, central domain HO345_RS01780 PF00438 S-adenosylmethionine synthetase, N-terminal domain HO345_RS01780 PF02773 S-adenosylmethionine synthetase, C-terminal domain HO345_RS01795 PF01206 Sulfurtransferase TusA HO345_RS01815 PF00266 Aminotransferase class-V HO345_RS01830 PF02547 Queuosine biosynthesis protein HO345_RS01835 PF12796 Ankyrin repeats (3 copies) HO345_RS01840 PF01871 AMMECR1 HO345_RS01840 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase HO345_RS01850 PF01202 Shikimate kinase HO345_RS01855 PF00390 Malic enzyme, N-terminal domain HO345_RS01855 PF03949 Malic enzyme, NAD binding domain HO345_RS01865 PF05343 M42 glutamyl aminopeptidase HO345_RS01870 PF02254 TrkA-N domain HO345_RS01870 PF07885 Ion channel HO345_RS01910 PF00664 ABC transporter transmembrane region HO345_RS01910 PF00005 ABC transporter HO345_RS01910 PF03412 Peptidase C39 family HO345_RS01930 PF00471 Ribosomal protein L33 HO345_RS01940 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HO345_RS01945 PF00467 KOW motif HO345_RS01945 PF02357 Transcription termination factor nusG HO345_RS01950 PF00298 Ribosomal protein L11, RNA binding domain HO345_RS01950 PF03946 Ribosomal protein L11, N-terminal domain HO345_RS01955 PF00687 Ribosomal protein L1p/L10e family HO345_RS01960 PF00466 Ribosomal protein L10 HO345_RS01965 PF00542 Ribosomal protein L7/L12 C-terminal domain HO345_RS01965 PF16320 Ribosomal protein L7/L12 dimerisation domain HO345_RS01970 PF04561 RNA polymerase Rpb2, domain 2 HO345_RS01970 PF04565 RNA polymerase Rpb2, domain 3 HO345_RS01970 PF10385 RNA polymerase beta subunit external 1 domain HO345_RS01970 PF00562 RNA polymerase Rpb2, domain 6 HO345_RS01970 PF04560 RNA polymerase Rpb2, domain 7 HO345_RS01970 PF04563 RNA polymerase beta subunit HO345_RS01975 PF04997 RNA polymerase Rpb1, domain 1 HO345_RS01975 PF00623 RNA polymerase Rpb1, domain 2 HO345_RS01975 PF04983 RNA polymerase Rpb1, domain 3 HO345_RS01975 PF05000 RNA polymerase Rpb1, domain 4 HO345_RS01975 PF04998 RNA polymerase Rpb1, domain 5 HO345_RS01980 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS01985 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS01995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS01995 PF00005 ABC transporter HO345_RS02035 PF00343 Carbohydrate phosphorylase HO345_RS02040 PF00155 Aminotransferase class I and II HO345_RS02055 PF00156 Phosphoribosyl transferase domain HO345_RS02055 PF13537 Glutamine amidotransferase domain HO345_RS02070 PF04963 Sigma-54 factor, core binding domain HO345_RS02070 PF00309 Sigma-54 factor, Activator interacting domain (AID) HO345_RS02070 PF04552 Sigma-54, DNA binding domain HO345_RS02075 PF00753 Metallo-beta-lactamase superfamily HO345_RS02085 PF01370 NAD dependent epimerase/dehydratase family HO345_RS02090 PF00468 Ribosomal protein L34 HO345_RS02100 PF01809 Putative membrane protein insertion efficiency factor HO345_RS02105 PF14849 YidC periplasmic domain HO345_RS02105 PF02096 60Kd inner membrane protein HO345_RS02110 PF14804 Jag N-terminus HO345_RS02110 PF01424 R3H domain HO345_RS02120 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HO345_RS02130 PF03186 CobD/Cbib protein HO345_RS02135 PF00574 Clp protease HO345_RS02140 PF02446 4-alpha-glucanotransferase HO345_RS02150 PF07478 D-ala D-ala ligase C-terminus HO345_RS02150 PF01820 D-ala D-ala ligase N-terminus HO345_RS02160 PF02654 Cobalamin-5-phosphate synthase HO345_RS02170 PF07730 Histidine kinase HO345_RS02185 PF00005 ABC transporter HO345_RS02200 PF05175 Methyltransferase small domain HO345_RS02205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HO345_RS02210 PF08534 Redoxin HO345_RS02220 PF04205 FMN-binding domain HO345_RS02220 PF12801 4Fe-4S binding domain HO345_RS02230 PF08534 Redoxin HO345_RS02235 PF04073 Aminoacyl-tRNA editing domain HO345_RS02240 PF01032 FecCD transport family HO345_RS02250 PF02599 Global regulator protein family HO345_RS02255 PF02623 FliW protein HO345_RS02260 PF00700 Bacterial flagellin C-terminal helical region HO345_RS02260 PF07196 Flagellin hook IN motif HO345_RS02260 PF00669 Bacterial flagellin N-terminal helical region HO345_RS02265 PF07196 Flagellin hook IN motif HO345_RS02265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HO345_RS02295 PF02545 Maf-like protein HO345_RS02300 PF00318 Ribosomal protein S2 HO345_RS02305 PF00889 Elongation factor TS HO345_RS02310 PF01765 Ribosome recycling factor HO345_RS02315 PF01255 Putative undecaprenyl diphosphate synthase HO345_RS02325 PF13288 DXP reductoisomerase C-terminal domain HO345_RS02325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HO345_RS02325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HO345_RS02330 PF17820 PDZ domain HO345_RS02330 PF02163 Peptidase family M50 HO345_RS02340 PF08264 Anticodon-binding domain of tRNA HO345_RS02340 PF00133 tRNA synthetases class I (I, L, M and V) HO345_RS02340 PF13603 Leucyl-tRNA synthetase, Domain 2 HO345_RS02340 PF09334 tRNA synthetases class I (M) HO345_RS02350 PF00375 Sodium:dicarboxylate symporter family HO345_RS02355 PF00664 ABC transporter transmembrane region HO345_RS02355 PF00005 ABC transporter HO345_RS02360 PF00664 ABC transporter transmembrane region HO345_RS02360 PF00005 ABC transporter HO345_RS02365 PF13361 UvrD-like helicase C-terminal domain HO345_RS02365 PF00580 UvrD/REP helicase N-terminal domain HO345_RS02370 PF02698 DUF218 domain HO345_RS02395 PF03806 AbgT putative transporter family HO345_RS02400 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS02400 PF07724 AAA domain (Cdc48 subfamily) HO345_RS02400 PF02861 Clp amino terminal domain, pathogenicity island component HO345_RS02400 PF10431 C-terminal, D2-small domain, of ClpB protein HO345_RS02400 PF17871 AAA lid domain HO345_RS02415 PF07685 CobB/CobQ-like glutamine amidotransferase domain HO345_RS02425 PF00196 Bacterial regulatory proteins, luxR family HO345_RS02425 PF00072 Response regulator receiver domain HO345_RS02430 PF00924 Mechanosensitive ion channel HO345_RS02455 PF01464 Transglycosylase SLT domain HO345_RS02455 PF10145 Phage-related minor tail protein HO345_RS02455 PF01551 Peptidase family M23 HO345_RS02460 PF03006 Haemolysin-III related HO345_RS02465 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS02465 PF09820 Predicted AAA-ATPase HO345_RS02480 PF01168 Alanine racemase, N-terminal domain HO345_RS02485 PF01544 CorA-like Mg2+ transporter protein HO345_RS02505 PF02719 Polysaccharide biosynthesis protein HO345_RS02510 PF12729 Four helix bundle sensory module for signal transduction HO345_RS02510 PF00672 HAMP domain HO345_RS02510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS02515 PF06574 FAD synthetase HO345_RS02515 PF01687 Riboflavin kinase HO345_RS02520 PF00312 Ribosomal protein S15 HO345_RS02525 PF03725 3' exoribonuclease family, domain 2 HO345_RS02525 PF00575 S1 RNA binding domain HO345_RS02525 PF00013 KH domain HO345_RS02525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HO345_RS02525 PF01138 3' exoribonuclease family, domain 1 HO345_RS02530 PF00692 dUTPase HO345_RS02545 PF04304 Protein of unknown function (DUF454) HO345_RS02550 PF11756 Nitrous oxide-stimulated promoter HO345_RS02555 PF00164 Ribosomal protein S12/S23 HO345_RS02560 PF00177 Ribosomal protein S7p/S5e HO345_RS02565 PF00679 Elongation factor G C-terminus HO345_RS02565 PF14492 Elongation Factor G, domain II HO345_RS02565 PF00009 Elongation factor Tu GTP binding domain HO345_RS02565 PF03144 Elongation factor Tu domain 2 HO345_RS02565 PF03764 Elongation factor G, domain IV HO345_RS02580 PF00301 Rubredoxin HO345_RS02590 PF02743 Cache domain HO345_RS02590 PF00672 HAMP domain HO345_RS02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS02595 PF01554 MatE HO345_RS02610 PF00005 ABC transporter HO345_RS02610 PF02687 FtsX-like permease family HO345_RS02610 PF12704 MacB-like periplasmic core domain HO345_RS02615 PF00152 tRNA synthetases class II (D, K and N) HO345_RS02620 PF01546 Peptidase family M20/M25/M40 HO345_RS02620 PF07687 Peptidase dimerisation domain HO345_RS02630 PF01297 Zinc-uptake complex component A periplasmic HO345_RS02650 PF04073 Aminoacyl-tRNA editing domain HO345_RS02650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS02650 PF03129 Anticodon binding domain HO345_RS02655 PF10502 Signal peptidase, peptidase S26 HO345_RS02665 PF13407 Periplasmic binding protein domain HO345_RS02665 PF18610 Periplasmic binding protein domain HO345_RS02670 PF00005 ABC transporter HO345_RS02675 PF02653 Branched-chain amino acid transport system / permease component HO345_RS02680 PF13847 Methyltransferase domain HO345_RS02690 PF00288 GHMP kinases N terminal domain HO345_RS02690 PF10509 Galactokinase galactose-binding signature HO345_RS02690 PF08544 GHMP kinases C terminal HO345_RS02710 PF01784 NIF3 (NGG1p interacting factor 3) HO345_RS02715 PF13726 Na+-H+ antiporter family HO345_RS02715 PF03553 Na+/H+ antiporter family HO345_RS02730 PF01053 Cys/Met metabolism PLP-dependent enzyme HO345_RS02735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HO345_RS02735 PF10371 Domain of unknown function HO345_RS02735 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HO345_RS02735 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HO345_RS02735 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HO345_RS02750 PF00849 RNA pseudouridylate synthase HO345_RS02750 PF01479 S4 domain HO345_RS02755 PF00155 Aminotransferase class I and II HO345_RS02765 PF14821 Threonine synthase N terminus HO345_RS02765 PF00291 Pyridoxal-phosphate dependent enzyme HO345_RS02770 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HO345_RS02770 PF02885 Glycosyl transferase family, helical bundle domain HO345_RS02770 PF00591 Glycosyl transferase family, a/b domain HO345_RS02775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HO345_RS02775 PF17768 RecJ OB domain HO345_RS02775 PF02272 DHHA1 domain HO345_RS02775 PF01368 DHH family HO345_RS02780 PF01476 LysM domain HO345_RS02780 PF08525 Opacity-associated protein A N-terminal motif HO345_RS02780 PF01551 Peptidase family M23 HO345_RS02790 PF02195 ParB-like nuclease domain HO345_RS02790 PF17762 HTH domain found in ParB protein HO345_RS02795 PF00501 AMP-binding enzyme HO345_RS02810 PF14353 CpXC protein HO345_RS02820 PF01569 PAP2 superfamily HO345_RS02825 PF01926 50S ribosome-binding GTPase HO345_RS02825 PF12631 MnmE helical domain HO345_RS02825 PF10396 GTP-binding protein TrmE N-terminus HO345_RS02840 PF00654 Voltage gated chloride channel HO345_RS02850 PF08241 Methyltransferase domain HO345_RS02860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HO345_RS02860 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HO345_RS02860 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS02870 PF02492 CobW/HypB/UreG, nucleotide-binding domain HO345_RS02880 PF04298 Putative neutral zinc metallopeptidase HO345_RS02885 PF01189 16S rRNA methyltransferase RsmB/F HO345_RS02885 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HO345_RS02885 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HO345_RS02890 PF13302 Acetyltransferase (GNAT) domain HO345_RS02900 PF00005 ABC transporter HO345_RS02910 PF00707 Translation initiation factor IF-3, C-terminal domain HO345_RS02910 PF05198 Translation initiation factor IF-3, N-terminal domain HO345_RS02915 PF01632 Ribosomal protein L35 HO345_RS02920 PF00453 Ribosomal protein L20 HO345_RS02930 PF05164 Cell division protein ZapA HO345_RS02935 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HO345_RS02945 PF01476 LysM domain HO345_RS02945 PF01464 Transglycosylase SLT domain HO345_RS02965 PF03313 Serine dehydratase alpha chain HO345_RS02970 PF00905 Penicillin binding protein transpeptidase domain HO345_RS02970 PF00912 Transglycosylase HO345_RS02970 PF06832 Penicillin-Binding Protein C-terminus Family HO345_RS02975 PF00326 Prolyl oligopeptidase family HO345_RS02975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HO345_RS03005 PF00005 ABC transporter HO345_RS03010 PF01891 Cobalt uptake substrate-specific transmembrane region HO345_RS03055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HO345_RS03060 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS03060 PF07724 AAA domain (Cdc48 subfamily) HO345_RS03060 PF17871 AAA lid domain HO345_RS03060 PF02861 Clp amino terminal domain, pathogenicity island component HO345_RS03060 PF10431 C-terminal, D2-small domain, of ClpB protein HO345_RS03065 PF02617 ATP-dependent Clp protease adaptor protein ClpS HO345_RS03075 PF02677 Epoxyqueuosine reductase QueH HO345_RS03080 PF09338 Glycine/sarcosine/betaine reductase component B subunits HO345_RS03090 PF00521 DNA gyrase/topoisomerase IV, subunit A HO345_RS03095 PF03687 Uncharacterised protein family (UPF0164) HO345_RS03110 PF00005 ABC transporter HO345_RS03110 PF13732 Domain of unknown function (DUF4162) HO345_RS03130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HO345_RS03135 PF00270 DEAD/DEAH box helicase HO345_RS03135 PF00271 Helicase conserved C-terminal domain HO345_RS03145 PF01979 Amidohydrolase family HO345_RS03155 PF07075 Protein of unknown function (DUF1343) HO345_RS03160 PF00144 Beta-lactamase HO345_RS03170 PF00497 Bacterial extracellular solute-binding proteins, family 3 HO345_RS03175 PF00497 Bacterial extracellular solute-binding proteins, family 3 HO345_RS03180 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HO345_RS03180 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HO345_RS03185 PF00448 SRP54-type protein, GTPase domain HO345_RS03185 PF02881 SRP54-type protein, helical bundle domain HO345_RS03185 PF02978 Signal peptide binding domain HO345_RS03195 PF01176 Translation initiation factor 1A / IF-1 HO345_RS03200 PF00684 DnaJ central domain HO345_RS03200 PF00226 DnaJ domain HO345_RS03200 PF01556 DnaJ C terminal domain HO345_RS03205 PF00696 Amino acid kinase family HO345_RS03210 PF00588 SpoU rRNA Methylase family HO345_RS03225 PF00575 S1 RNA binding domain HO345_RS03230 PF02954 Bacterial regulatory protein, Fis family HO345_RS03230 PF00072 Response regulator receiver domain HO345_RS03230 PF00158 Sigma-54 interaction domain HO345_RS03250 PF00563 EAL domain HO345_RS03250 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS03250 PF03707 Bacterial signalling protein N terminal repeat HO345_RS03255 PF04055 Radical SAM superfamily HO345_RS03280 PF01042 Endoribonuclease L-PSP HO345_RS03285 PF08676 MutL C terminal dimerisation domain HO345_RS03285 PF01119 DNA mismatch repair protein, C-terminal domain HO345_RS03290 PF02609 Exonuclease VII small subunit HO345_RS03295 PF00005 ABC transporter HO345_RS03300 PF00005 ABC transporter HO345_RS03310 PF04023 FeoA domain HO345_RS03315 PF07670 Nucleoside recognition HO345_RS03315 PF07664 Ferrous iron transport protein B C terminus HO345_RS03315 PF04023 FeoA domain HO345_RS03315 PF02421 Ferrous iron transport protein B HO345_RS03315 PF17910 FeoB cytosolic helical domain HO345_RS03360 PF00266 Aminotransferase class-V HO345_RS03380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS03410 PF00448 SRP54-type protein, GTPase domain HO345_RS03410 PF02881 SRP54-type protein, helical bundle domain HO345_RS03420 PF02687 FtsX-like permease family HO345_RS03420 PF12704 MacB-like periplasmic core domain HO345_RS03425 PF00005 ABC transporter HO345_RS03435 PF02151 UvrB/uvrC motif HO345_RS03440 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain HO345_RS03445 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS03445 PF07724 AAA domain (Cdc48 subfamily) HO345_RS03445 PF17871 AAA lid domain HO345_RS03445 PF02861 Clp amino terminal domain, pathogenicity island component HO345_RS03445 PF10431 C-terminal, D2-small domain, of ClpB protein HO345_RS03450 PF00483 Nucleotidyl transferase HO345_RS03455 PF13439 Glycosyltransferase Family 4 HO345_RS03455 PF00534 Glycosyl transferases group 1 HO345_RS03465 PF03330 Lytic transglycolase HO345_RS03475 PF01026 TatD related DNase HO345_RS03480 PF00691 OmpA family HO345_RS03555 PF00892 EamA-like transporter family HO345_RS03585 PF00664 ABC transporter transmembrane region HO345_RS03585 PF00005 ABC transporter HO345_RS03590 PF00005 ABC transporter HO345_RS03590 PF00664 ABC transporter transmembrane region HO345_RS03590 PF04954 Siderophore-interacting protein HO345_RS03590 PF08021 Siderophore-interacting FAD-binding domain HO345_RS03600 PF00440 Bacterial regulatory proteins, tetR family HO345_RS03610 PF01432 Peptidase family M3 HO345_RS03610 PF08439 Oligopeptidase F HO345_RS03615 PF00929 Exonuclease HO345_RS03620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HO345_RS03620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HO345_RS03620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HO345_RS03620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HO345_RS03625 PF01078 Magnesium chelatase, subunit ChlI HO345_RS03625 PF13335 Magnesium chelatase, subunit ChlI C-terminal HO345_RS03630 PF10415 Fumarase C C-terminus HO345_RS03630 PF00206 Lyase HO345_RS03635 PF13488 Glycine zipper HO345_RS03635 PF00691 OmpA family HO345_RS03645 PF06733 DEAD_2 HO345_RS03645 PF13307 Helicase C-terminal domain HO345_RS03665 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS03665 PF00672 HAMP domain HO345_RS03670 PF04773 FecR protein HO345_RS03705 PF04101 Glycosyltransferase family 28 C-terminal domain HO345_RS03705 PF03033 Glycosyltransferase family 28 N-terminal domain HO345_RS03710 PF02674 Colicin V production protein HO345_RS03715 PF09115 DNA polymerase III, delta subunit, C terminal HO345_RS03720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS03720 PF00512 His Kinase A (phospho-acceptor) domain HO345_RS03720 PF00989 PAS fold HO345_RS03725 PF00158 Sigma-54 interaction domain HO345_RS03725 PF00072 Response regulator receiver domain HO345_RS03725 PF02954 Bacterial regulatory protein, Fis family HO345_RS03730 PF01728 FtsJ-like methyltransferase HO345_RS03740 PF17820 PDZ domain HO345_RS03740 PF13180 PDZ domain HO345_RS03745 PF00999 Sodium/hydrogen exchanger family HO345_RS03750 PF02690 Na+/Pi-cotransporter HO345_RS03755 PF00009 Elongation factor Tu GTP binding domain HO345_RS03755 PF03144 Elongation factor Tu domain 2 HO345_RS03755 PF09105 Elongation factor SelB, winged helix HO345_RS03755 PF09106 Elongation factor SelB, winged helix HO345_RS03755 PF09107 Elongation factor SelB, winged helix HO345_RS03825 PF00753 Metallo-beta-lactamase superfamily HO345_RS03825 PF12706 Beta-lactamase superfamily domain HO345_RS03830 PF02608 ABC transporter substrate-binding protein PnrA-like HO345_RS03835 PF00005 ABC transporter HO345_RS03840 PF02653 Branched-chain amino acid transport system / permease component HO345_RS03845 PF02653 Branched-chain amino acid transport system / permease component HO345_RS03875 PF00163 Ribosomal protein S4/S9 N-terminal domain HO345_RS03875 PF01479 S4 domain HO345_RS03925 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HO345_RS03945 PF03484 tRNA synthetase B5 domain HO345_RS03945 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HO345_RS03960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HO345_RS03975 PF13186 Iron-sulfur cluster-binding domain HO345_RS03990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HO345_RS03990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HO345_RS03995 PF00465 Iron-containing alcohol dehydrogenase HO345_RS04000 PF17864 RuvB AAA lid domain HO345_RS04000 PF05491 RuvB C-terminal winged helix domain HO345_RS04000 PF05496 Holliday junction DNA helicase RuvB P-loop domain HO345_RS04010 PF10672 S-adenosylmethionine-dependent methyltransferase HO345_RS04015 PF02629 CoA binding domain HO345_RS04015 PF06971 Putative DNA-binding protein N-terminus HO345_RS04020 PF02780 Transketolase, C-terminal domain HO345_RS04020 PF02779 Transketolase, pyrimidine binding domain HO345_RS04020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HO345_RS04025 PF02457 DisA bacterial checkpoint controller nucleotide-binding HO345_RS04035 PF01648 4'-phosphopantetheinyl transferase superfamily HO345_RS04055 PF02810 SEC-C motif HO345_RS04055 PF07517 SecA DEAD-like domain HO345_RS04055 PF01043 SecA preprotein cross-linking domain HO345_RS04055 PF07516 SecA Wing and Scaffold domain HO345_RS04060 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS04060 PF09820 Predicted AAA-ATPase HO345_RS04065 PF00551 Formyl transferase HO345_RS04070 PF02142 MGS-like domain HO345_RS04070 PF01808 AICARFT/IMPCHase bienzyme HO345_RS04075 PF07650 KH domain HO345_RS04075 PF01926 50S ribosome-binding GTPase HO345_RS04080 PF04060 Putative Fe-S cluster HO345_RS04085 PF00009 Elongation factor Tu GTP binding domain HO345_RS04085 PF14492 Elongation Factor G, domain II HO345_RS04085 PF00679 Elongation factor G C-terminus HO345_RS04085 PF03144 Elongation factor Tu domain 2 HO345_RS04085 PF06421 GTP-binding protein LepA C-terminus HO345_RS04095 PF05525 Branched-chain amino acid transport protein HO345_RS04110 PF04055 Radical SAM superfamily HO345_RS04110 PF00919 Uncharacterized protein family UPF0004 HO345_RS04130 PF05973 Phage derived protein Gp49-like (DUF891) HO345_RS04135 PF00232 Glycosyl hydrolase family 1 HO345_RS04150 PF12848 ABC transporter HO345_RS04150 PF00005 ABC transporter HO345_RS04160 PF13180 PDZ domain HO345_RS04160 PF03572 Peptidase family S41 HO345_RS04165 PF04452 RNA methyltransferase HO345_RS04190 PF08367 Peptidase M16C associated HO345_RS04190 PF00675 Insulinase (Peptidase family M16) HO345_RS04190 PF05193 Peptidase M16 inactive domain HO345_RS04195 PF02075 Crossover junction endodeoxyribonuclease RuvC HO345_RS04200 PF01330 RuvA N terminal domain HO345_RS04260 PF01934 Protein of unknown function DUF86 HO345_RS04280 PF00005 ABC transporter HO345_RS04285 PF02687 FtsX-like permease family HO345_RS04285 PF12704 MacB-like periplasmic core domain HO345_RS04285 PF00005 ABC transporter HO345_RS04315 PF00589 Phage integrase family HO345_RS04315 PF13495 Phage integrase, N-terminal SAM-like domain HO345_RS04330 PF00795 Carbon-nitrogen hydrolase HO345_RS04400 PF00795 Carbon-nitrogen hydrolase HO345_RS04410 PF01934 Protein of unknown function DUF86 HO345_RS04445 PF01820 D-ala D-ala ligase N-terminus HO345_RS04445 PF07478 D-ala D-ala ligase C-terminus HO345_RS04455 PF08378 Nuclease-related domain HO345_RS04575 PF00795 Carbon-nitrogen hydrolase HO345_RS04645 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system HO345_RS04680 PF13276 HTH-like domain HO345_RS04680 PF00665 Integrase core domain HO345_RS04680 PF13333 Integrase core domain HO345_RS04720 PF01209 ubiE/COQ5 methyltransferase family HO345_RS04730 PF00300 Histidine phosphatase superfamily (branch 1) HO345_RS04740 PF01966 HD domain HO345_RS04755 PF06397 Desulfoferrodoxin, N-terminal domain HO345_RS04755 PF01880 Desulfoferrodoxin HO345_RS04760 PF16363 GDP-mannose 4,6 dehydratase HO345_RS04765 PF00829 Ribosomal prokaryotic L21 protein HO345_RS04775 PF01016 Ribosomal L27 protein HO345_RS04780 PF01018 GTP1/OBG HO345_RS04780 PF01926 50S ribosome-binding GTPase HO345_RS04785 PF01467 Cytidylyltransferase-like HO345_RS04800 PF02417 Chromate transporter HO345_RS04805 PF02417 Chromate transporter HO345_RS04825 PF00501 AMP-binding enzyme HO345_RS04835 PF17092 Penicillin-binding protein OB-like domain HO345_RS04835 PF00912 Transglycosylase HO345_RS04835 PF00905 Penicillin binding protein transpeptidase domain HO345_RS04845 PF01551 Peptidase family M23 HO345_RS04845 PF04225 Opacity-associated protein A LysM-like domain HO345_RS04855 PF00037 4Fe-4S binding domain HO345_RS04865 PF03372 Endonuclease/Exonuclease/phosphatase family HO345_RS04870 PF00557 Metallopeptidase family M24 HO345_RS04875 PF00226 DnaJ domain HO345_RS04875 PF01556 DnaJ C terminal domain HO345_RS04875 PF00684 DnaJ central domain HO345_RS04885 PF01593 Flavin containing amine oxidoreductase HO345_RS04890 PF00175 Oxidoreductase NAD-binding domain HO345_RS04890 PF00042 Globin HO345_RS04890 PF00970 Oxidoreductase FAD-binding domain HO345_RS04910 PF12627 Probable RNA and SrmB- binding site of polymerase A HO345_RS04910 PF12626 Polymerase A arginine-rich C-terminus HO345_RS04910 PF01743 Poly A polymerase head domain HO345_RS04920 PF00270 DEAD/DEAH box helicase HO345_RS04920 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HO345_RS04920 PF17191 RecG wedge domain HO345_RS04945 PF01047 MarR family HO345_RS04950 PF00117 Glutamine amidotransferase class-I HO345_RS04950 PF01171 PP-loop family HO345_RS04950 PF00958 GMP synthase C terminal domain HO345_RS04955 PF01979 Amidohydrolase family HO345_RS04965 PF00162 Phosphoglycerate kinase HO345_RS04970 PF01520 N-acetylmuramoyl-L-alanine amidase HO345_RS04980 PF04620 Flagellar filament outer layer protein Flaa HO345_RS04990 PF01649 Ribosomal protein S20 HO345_RS04995 PF00216 Bacterial DNA-binding protein HO345_RS05000 PF00795 Carbon-nitrogen hydrolase HO345_RS05010 PF00994 Probable molybdopterin binding domain HO345_RS05010 PF18146 Damage-inducible protein CinA KH domain HO345_RS05010 PF02464 Competence-damaged protein HO345_RS05040 PF00300 Histidine phosphatase superfamily (branch 1) HO345_RS05045 PF07364 Metallopeptidase family M81 HO345_RS05045 PF07171 MlrC C-terminus HO345_RS05065 PF00005 ABC transporter HO345_RS05080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HO345_RS05085 PF00563 EAL domain HO345_RS05085 PF01590 GAF domain HO345_RS05085 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS05085 PF00360 Phytochrome region HO345_RS05090 PF00156 Phosphoribosyl transferase domain HO345_RS05095 PF16886 ATPsynthase alpha/beta subunit N-term extension HO345_RS05095 PF02874 ATP synthase alpha/beta family, beta-barrel domain HO345_RS05095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HO345_RS05100 PF02874 ATP synthase alpha/beta family, beta-barrel domain HO345_RS05100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HO345_RS05105 PF01813 ATP synthase subunit D HO345_RS05120 PF01250 Ribosomal protein S6 HO345_RS05125 PF00436 Single-strand binding protein family HO345_RS05130 PF01084 Ribosomal protein S18 HO345_RS05135 PF01281 Ribosomal protein L9, N-terminal domain HO345_RS05135 PF03948 Ribosomal protein L9, C-terminal domain HO345_RS05140 PF10431 C-terminal, D2-small domain, of ClpB protein HO345_RS05140 PF06689 ClpX C4-type zinc finger HO345_RS05140 PF07724 AAA domain (Cdc48 subfamily) HO345_RS05145 PF00574 Clp protease HO345_RS05150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HO345_RS05150 PF05698 Bacterial trigger factor protein (TF) C-terminus HO345_RS05150 PF05697 Bacterial trigger factor protein (TF) HO345_RS05165 PF01008 Initiation factor 2 subunit family HO345_RS05185 PF03796 DnaB-like helicase C terminal domain HO345_RS05185 PF00772 DnaB-like helicase N terminal domain HO345_RS05195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HO345_RS05195 PF01411 tRNA synthetases class II (A) HO345_RS05200 PF13145 PPIC-type PPIASE domain HO345_RS05205 PF01029 NusB family HO345_RS05220 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HO345_RS05220 PF00271 Helicase conserved C-terminal domain HO345_RS05220 PF04408 Helicase associated domain (HA2) HO345_RS05220 PF00270 DEAD/DEAH box helicase HO345_RS05225 PF09820 Predicted AAA-ATPase HO345_RS05225 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS05230 PF02368 Bacterial Ig-like domain (group 2) HO345_RS05240 PF02632 BioY family HO345_RS05245 PF00005 ABC transporter HO345_RS05250 PF02361 Cobalt transport protein HO345_RS05255 PF01327 Polypeptide deformylase HO345_RS05260 PF00551 Formyl transferase HO345_RS05260 PF02911 Formyl transferase, C-terminal domain HO345_RS05265 PF03793 PASTA domain HO345_RS05275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HO345_RS05280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HO345_RS05280 PF01488 Shikimate / quinate 5-dehydrogenase HO345_RS05280 PF08501 Shikimate dehydrogenase substrate binding domain HO345_RS05290 PF01121 Dephospho-CoA kinase HO345_RS05295 PF01612 3'-5' exonuclease HO345_RS05295 PF00476 DNA polymerase family A HO345_RS05295 PF01367 5'-3' exonuclease, C-terminal SAM fold HO345_RS05295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HO345_RS05315 PF06857 Malonate decarboxylase delta subunit (MdcD) HO345_RS05320 PF03328 HpcH/HpaI aldolase/citrate lyase family HO345_RS05325 PF04223 Citrate lyase, alpha subunit (CitF) HO345_RS05335 PF05973 Phage derived protein Gp49-like (DUF891) HO345_RS05345 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS05345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HO345_RS05355 PF01571 Aminomethyltransferase folate-binding domain HO345_RS05355 PF08669 Glycine cleavage T-protein C-terminal barrel domain HO345_RS05360 PF01597 Glycine cleavage H-protein HO345_RS05365 PF02347 Glycine cleavage system P-protein HO345_RS05370 PF02347 Glycine cleavage system P-protein HO345_RS05385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HO345_RS05385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HO345_RS05425 PF01209 ubiE/COQ5 methyltransferase family HO345_RS05435 PF04851 Type III restriction enzyme, res subunit HO345_RS05435 PF00271 Helicase conserved C-terminal domain HO345_RS05445 PF13344 Haloacid dehalogenase-like hydrolase HO345_RS05445 PF00293 NUDIX domain HO345_RS05450 PF00440 Bacterial regulatory proteins, tetR family HO345_RS05450 PF08361 MAATS-type transcriptional repressor, C-terminal region HO345_RS05465 PF00005 ABC transporter HO345_RS05470 PF01888 CbiD HO345_RS05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS05475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HO345_RS05480 PF02906 Iron only hydrogenase large subunit, C-terminal domain HO345_RS05480 PF02256 Iron hydrogenase small subunit HO345_RS05480 PF00037 4Fe-4S binding domain HO345_RS05480 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HO345_RS05485 PF00005 ABC transporter HO345_RS05485 PF12848 ABC transporter HO345_RS05490 PF01513 ATP-NAD kinase HO345_RS05500 PF01584 CheW-like domain HO345_RS05505 PF00579 tRNA synthetases class I (W and Y) HO345_RS05515 PF01336 OB-fold nucleic acid binding domain HO345_RS05515 PF02938 GAD domain HO345_RS05515 PF00152 tRNA synthetases class II (D, K and N) HO345_RS05535 PF00534 Glycosyl transferases group 1 HO345_RS05535 PF08323 Starch synthase catalytic domain HO345_RS05570 PF04055 Radical SAM superfamily HO345_RS05570 PF00919 Uncharacterized protein family UPF0004 HO345_RS05570 PF01938 TRAM domain HO345_RS05575 PF04055 Radical SAM superfamily HO345_RS05685 PF03099 Biotin/lipoate A/B protein ligase family HO345_RS05685 PF10437 Bacterial lipoate protein ligase C-terminus HO345_RS05690 PF00005 ABC transporter HO345_RS05690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS05695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS05695 PF00005 ABC transporter HO345_RS05700 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS05700 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS05710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS05715 PF00365 Phosphofructokinase HO345_RS05720 PF02132 RecR protein HO345_RS05720 PF13662 Toprim domain HO345_RS05725 PF02575 YbaB/EbfC DNA-binding family HO345_RS05730 PF01351 Ribonuclease HII HO345_RS05750 PF02618 YceG-like family HO345_RS05765 PF03692 Putative zinc- or iron-chelating domain HO345_RS05785 PF01653 NAD-dependent DNA ligase adenylation domain HO345_RS05785 PF03120 NAD-dependent DNA ligase OB-fold domain HO345_RS05785 PF00533 BRCA1 C Terminus (BRCT) domain HO345_RS05795 PF00348 Polyprenyl synthetase HO345_RS05805 PF13277 YmdB-like protein HO345_RS05835 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HO345_RS05840 PF08218 Citrate lyase ligase C-terminal domain HO345_RS05845 PF05681 Fumarate hydratase (Fumerase) HO345_RS05845 PF05683 Fumarase C-terminus HO345_RS05850 PF05681 Fumarate hydratase (Fumerase) HO345_RS05855 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS05855 PF09820 Predicted AAA-ATPase HO345_RS05875 PF00005 ABC transporter HO345_RS05880 PF02687 FtsX-like permease family HO345_RS05880 PF12704 MacB-like periplasmic core domain HO345_RS05895 PF10634 Fe2+ transport protein HO345_RS05900 PF03239 Iron permease FTR1 family HO345_RS05905 PF00664 ABC transporter transmembrane region HO345_RS05905 PF00005 ABC transporter HO345_RS05910 PF00005 ABC transporter HO345_RS05920 PF03315 Serine dehydratase beta chain HO345_RS05920 PF01842 ACT domain HO345_RS05925 PF03313 Serine dehydratase alpha chain HO345_RS05935 PF01197 Ribosomal protein L31 HO345_RS05940 PF07497 Rho termination factor, RNA-binding domain HO345_RS05940 PF07498 Rho termination factor, N-terminal domain HO345_RS05940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HO345_RS05955 PF00391 PEP-utilising enzyme, mobile domain HO345_RS05955 PF02896 PEP-utilising enzyme, TIM barrel domain HO345_RS05955 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HO345_RS05965 PF10397 Adenylosuccinate lyase C-terminus HO345_RS05965 PF00206 Lyase HO345_RS05975 PF13525 Outer membrane lipoprotein HO345_RS05985 PF06470 SMC proteins Flexible Hinge Domain HO345_RS05985 PF02463 RecF/RecN/SMC N terminal domain HO345_RS05995 PF00072 Response regulator receiver domain HO345_RS06005 PF01584 CheW-like domain HO345_RS06010 PF01584 CheW-like domain HO345_RS06010 PF02895 Signal transducing histidine kinase, homodimeric domain HO345_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS06010 PF01627 Hpt domain HO345_RS06010 PF07194 P2 response regulator binding domain HO345_RS06025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HO345_RS06025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HO345_RS06030 PF01709 Transcriptional regulator HO345_RS06040 PF01321 Creatinase/Prolidase N-terminal domain HO345_RS06040 PF00557 Metallopeptidase family M24 HO345_RS06065 PF00700 Bacterial flagellin C-terminal helical region HO345_RS06065 PF00669 Bacterial flagellin N-terminal helical region HO345_RS06070 PF00700 Bacterial flagellin C-terminal helical region HO345_RS06070 PF00669 Bacterial flagellin N-terminal helical region HO345_RS06080 PF07195 Flagellar hook-associated protein 2 C-terminus HO345_RS06080 PF02465 Flagellar hook-associated protein 2 N-terminus HO345_RS06095 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HO345_RS06105 PF00072 Response regulator receiver domain HO345_RS06110 PF06969 HemN C-terminal domain HO345_RS06110 PF04055 Radical SAM superfamily HO345_RS06115 PF10502 Signal peptidase, peptidase S26 HO345_RS06120 PF01668 SmpB protein HO345_RS06130 PF01300 Telomere recombination HO345_RS06150 PF01973 Protein of unknown function DUF115 HO345_RS06165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HO345_RS06170 PF16874 Glycosyl hydrolase family 36 C-terminal domain HO345_RS06170 PF16875 Glycosyl hydrolase family 36 N-terminal domain HO345_RS06180 PF00488 MutS domain V HO345_RS06180 PF01713 Smr domain HO345_RS06185 PF03193 RsgA GTPase HO345_RS06185 PF16745 RsgA N-terminal domain HO345_RS06190 PF01177 Asp/Glu/Hydantoin racemase HO345_RS06210 PF10996 Beta-Casp domain HO345_RS06210 PF00753 Metallo-beta-lactamase superfamily HO345_RS06210 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HO345_RS06215 PF00588 SpoU rRNA Methylase family HO345_RS06215 PF08032 RNA 2'-O ribose methyltransferase substrate binding HO345_RS06220 PF13393 Histidyl-tRNA synthetase HO345_RS06225 PF16363 GDP-mannose 4,6 dehydratase HO345_RS06230 PF00483 Nucleotidyl transferase HO345_RS06235 PF00534 Glycosyl transferases group 1 HO345_RS06235 PF13439 Glycosyltransferase Family 4 HO345_RS06240 PF02397 Bacterial sugar transferase HO345_RS06250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HO345_RS06255 PF02096 60Kd inner membrane protein HO345_RS06260 PF02096 60Kd inner membrane protein HO345_RS06265 PF00535 Glycosyl transferase family 2 HO345_RS06270 PF00535 Glycosyl transferase family 2 HO345_RS06275 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) HO345_RS06280 PF00535 Glycosyl transferase family 2 HO345_RS06300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HO345_RS06310 PF05523 WxcM-like, C-terminal HO345_RS06320 PF00535 Glycosyl transferase family 2 HO345_RS06320 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase HO345_RS06325 PF00535 Glycosyl transferase family 2 HO345_RS06330 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HO345_RS06330 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HO345_RS06330 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HO345_RS06340 PF00535 Glycosyl transferase family 2 HO345_RS06345 PF00535 Glycosyl transferase family 2 HO345_RS06355 PF01370 NAD dependent epimerase/dehydratase family HO345_RS06365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HO345_RS06370 PF16363 GDP-mannose 4,6 dehydratase HO345_RS06375 PF00483 Nucleotidyl transferase HO345_RS06380 PF00005 ABC transporter HO345_RS06415 PF00999 Sodium/hydrogen exchanger family HO345_RS06440 PF01966 HD domain HO345_RS06455 PF08239 Bacterial SH3 domain HO345_RS06460 PF00005 ABC transporter HO345_RS06460 PF16326 ABC transporter C-terminal domain HO345_RS06460 PF12848 ABC transporter HO345_RS06470 PF02540 NAD synthase HO345_RS06475 PF01790 Prolipoprotein diacylglyceryl transferase HO345_RS06485 PF10609 NUBPL iron-transfer P-loop NTPase HO345_RS06515 PF03116 NQR2, RnfD, RnfE family HO345_RS06520 PF10531 SLBB domain HO345_RS06520 PF13375 RnfC Barrel sandwich hybrid domain HO345_RS06520 PF13237 4Fe-4S dicluster domain HO345_RS06520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HO345_RS06535 PF00849 RNA pseudouridylate synthase HO345_RS06535 PF01479 S4 domain HO345_RS06540 PF00672 HAMP domain HO345_RS06540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS06540 PF02743 Cache domain HO345_RS06545 PF00403 Heavy-metal-associated domain HO345_RS06550 PF01022 Bacterial regulatory protein, arsR family HO345_RS06555 PF01991 ATP synthase (E/31 kDa) subunit HO345_RS06580 PF01467 Cytidylyltransferase-like HO345_RS06605 PF00773 RNB domain HO345_RS06610 PF01256 Carbohydrate kinase HO345_RS06610 PF03853 YjeF-related protein N-terminus HO345_RS06615 PF17757 UvrB interaction domain HO345_RS06615 PF04851 Type III restriction enzyme, res subunit HO345_RS06615 PF12344 Ultra-violet resistance protein B HO345_RS06615 PF02151 UvrB/uvrC motif HO345_RS06615 PF00271 Helicase conserved C-terminal domain HO345_RS06620 PF08361 MAATS-type transcriptional repressor, C-terminal region HO345_RS06620 PF00440 Bacterial regulatory proteins, tetR family HO345_RS06625 PF00005 ABC transporter HO345_RS06650 PF00005 ABC transporter HO345_RS06665 PF00664 ABC transporter transmembrane region HO345_RS06665 PF00005 ABC transporter HO345_RS06670 PF04954 Siderophore-interacting protein HO345_RS06670 PF08021 Siderophore-interacting FAD-binding domain HO345_RS06670 PF00005 ABC transporter HO345_RS06670 PF00664 ABC transporter transmembrane region HO345_RS06675 PF02311 AraC-like ligand binding domain HO345_RS06675 PF12833 Helix-turn-helix domain HO345_RS06685 PF00005 ABC transporter HO345_RS06695 PF13280 WYL domain HO345_RS06695 PF08279 HTH domain HO345_RS06700 PF08264 Anticodon-binding domain of tRNA HO345_RS06700 PF00133 tRNA synthetases class I (I, L, M and V) HO345_RS06700 PF10458 Valyl tRNA synthetase tRNA binding arm HO345_RS06710 PF00860 Permease family HO345_RS06720 PF01263 Aldose 1-epimerase HO345_RS06735 PF01098 Cell cycle protein HO345_RS06740 PF00905 Penicillin binding protein transpeptidase domain HO345_RS06740 PF03717 Penicillin-binding Protein dimerisation domain HO345_RS06775 PF00140 Sigma-70 factor, region 1.2 HO345_RS06775 PF04545 Sigma-70, region 4 HO345_RS06775 PF04539 Sigma-70 region 3 HO345_RS06775 PF04542 Sigma-70 region 2 HO345_RS06775 PF03979 Sigma-70 factor, region 1.1 HO345_RS06780 PF08275 DNA primase catalytic core, N-terminal domain HO345_RS06780 PF01807 CHC2 zinc finger HO345_RS06795 PF13180 PDZ domain HO345_RS06805 PF01171 PP-loop family HO345_RS06810 PF14693 Ribosomal protein TL5, C-terminal domain HO345_RS06810 PF01386 Ribosomal L25p family HO345_RS06820 PF04026 SpoVG HO345_RS06825 PF08544 GHMP kinases C terminal HO345_RS06825 PF00288 GHMP kinases N terminal domain HO345_RS06835 PF03062 MBOAT, membrane-bound O-acyltransferase family HO345_RS06845 PF01145 SPFH domain / Band 7 family HO345_RS06850 PF01145 SPFH domain / Band 7 family HO345_RS06860 PF03477 ATP cone domain HO345_RS06885 PF01205 Uncharacterized protein family UPF0029 HO345_RS06885 PF09186 Domain of unknown function (DUF1949) HO345_RS06890 PF00753 Metallo-beta-lactamase superfamily HO345_RS06890 PF13567 Domain of unknown function (DUF4131) HO345_RS06890 PF03772 Competence protein HO345_RS06915 PF00905 Penicillin binding protein transpeptidase domain HO345_RS06915 PF03717 Penicillin-binding Protein dimerisation domain HO345_RS06920 PF10502 Signal peptidase, peptidase S26 HO345_RS06925 PF05872 Bacterial protein of unknown function (DUF853) HO345_RS06935 PF01523 Putative modulator of DNA gyrase HO345_RS06960 PF02779 Transketolase, pyrimidine binding domain HO345_RS06960 PF00456 Transketolase, thiamine diphosphate binding domain HO345_RS06980 PF02463 RecF/RecN/SMC N terminal domain HO345_RS07000 PF00877 NlpC/P60 family HO345_RS07000 PF01476 LysM domain HO345_RS07010 PF02603 HPr Serine kinase N terminus HO345_RS07010 PF07475 HPr Serine kinase C-terminal domain HO345_RS07015 PF00381 PTS HPr component phosphorylation site HO345_RS07020 PF01523 Putative modulator of DNA gyrase HO345_RS07035 PF00270 DEAD/DEAH box helicase HO345_RS07035 PF17757 UvrB interaction domain HO345_RS07035 PF03461 TRCF domain HO345_RS07035 PF00271 Helicase conserved C-terminal domain HO345_RS07035 PF02559 CarD-like/TRCF domain HO345_RS07045 PF14841 FliG middle domain HO345_RS07045 PF01706 FliG C-terminal domain HO345_RS07045 PF14842 FliG N-terminal domain HO345_RS07050 PF02743 Cache domain HO345_RS07050 PF00672 HAMP domain HO345_RS07050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS07080 PF00586 AIR synthase related protein, N-terminal domain HO345_RS07080 PF02769 AIR synthase related protein, C-terminal domain HO345_RS07080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HO345_RS07085 PF04260 Protein of unknown function (DUF436) HO345_RS07100 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS07100 PF09820 Predicted AAA-ATPase HO345_RS07105 PF12838 4Fe-4S dicluster domain HO345_RS07105 PF02256 Iron hydrogenase small subunit HO345_RS07105 PF02906 Iron only hydrogenase large subunit, C-terminal domain HO345_RS07115 PF06044 Dam-replacing family HO345_RS07115 PF17726 Dam-replacing HTH domain HO345_RS07125 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HO345_RS07125 PF02843 Phosphoribosylglycinamide synthetase, C domain HO345_RS07125 PF02844 Phosphoribosylglycinamide synthetase, N domain HO345_RS07130 PF00586 AIR synthase related protein, N-terminal domain HO345_RS07130 PF02769 AIR synthase related protein, C-terminal domain HO345_RS07135 PF04551 GcpE protein HO345_RS07150 PF02028 BCCT, betaine/carnitine/choline family transporter HO345_RS07155 PF12804 MobA-like NTP transferase domain HO345_RS07160 PF01235 Sodium:alanine symporter family HO345_RS07185 PF00488 MutS domain V HO345_RS07185 PF01713 Smr domain HO345_RS07205 PF00092 von Willebrand factor type A domain HO345_RS07215 PF01882 Protein of unknown function DUF58 HO345_RS07230 PF03471 Transporter associated domain HO345_RS07230 PF00571 CBS domain HO345_RS07235 PF02130 Uncharacterized protein family UPF0054 HO345_RS07240 PF01966 HD domain HO345_RS07240 PF07698 7TM receptor with intracellular HD hydrolase HO345_RS07240 PF07697 7TM-HD extracellular HO345_RS07245 PF02562 PhoH-like protein HO345_RS07260 PF00121 Triosephosphate isomerase HO345_RS07265 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS07270 PF03033 Glycosyltransferase family 28 N-terminal domain HO345_RS07270 PF04101 Glycosyltransferase family 28 C-terminal domain HO345_RS07290 PF00753 Metallo-beta-lactamase superfamily HO345_RS07290 PF16123 Hydroxyacylglutathione hydrolase C-terminus HO345_RS07300 PF10282 Lactonase, 7-bladed beta-propeller HO345_RS07305 PF01297 Zinc-uptake complex component A periplasmic HO345_RS07310 PF00005 ABC transporter HO345_RS07315 PF00950 ABC 3 transport family HO345_RS07320 PF00950 ABC 3 transport family HO345_RS07330 PF00933 Glycosyl hydrolase family 3 N terminal domain HO345_RS07345 PF18269 T3SS EscN ATPase C-terminal domain HO345_RS07345 PF02874 ATP synthase alpha/beta family, beta-barrel domain HO345_RS07345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HO345_RS07350 PF02108 Flagellar assembly protein FliH HO345_RS07355 PF14842 FliG N-terminal domain HO345_RS07355 PF01706 FliG C-terminal domain HO345_RS07355 PF14841 FliG middle domain HO345_RS07360 PF01514 Secretory protein of YscJ/FliF family HO345_RS07360 PF08345 Flagellar M-ring protein C-terminal HO345_RS07365 PF02049 Flagellar hook-basal body complex protein FliE HO345_RS07370 PF00460 Flagella basal body rod protein HO345_RS07370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HO345_RS07375 PF00460 Flagella basal body rod protein HO345_RS07380 PF07724 AAA domain (Cdc48 subfamily) HO345_RS07380 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS07385 PF00227 Proteasome subunit HO345_RS07390 PF02899 Phage integrase, N-terminal SAM-like domain HO345_RS07390 PF00589 Phage integrase family HO345_RS07395 PF01131 DNA topoisomerase HO345_RS07395 PF01751 Toprim domain HO345_RS07395 PF01396 Topoisomerase DNA binding C4 zinc finger HO345_RS07400 PF02481 DNA recombination-mediator protein A HO345_RS07400 PF17782 DprA winged helix domain HO345_RS07410 PF02899 Phage integrase, N-terminal SAM-like domain HO345_RS07410 PF00589 Phage integrase family HO345_RS07415 PF00091 Tubulin/FtsZ family, GTPase domain HO345_RS07415 PF12327 FtsZ family, C-terminal domain HO345_RS07420 PF02491 SHS2 domain inserted in FTSA HO345_RS07425 PF08478 POTRA domain, FtsQ-type HO345_RS07425 PF03799 Cell division protein FtsQ HO345_RS07430 PF01098 Cell cycle protein HO345_RS07435 PF01225 Mur ligase family, catalytic domain HO345_RS07435 PF02875 Mur ligase family, glutamate ligase domain HO345_RS07435 PF08245 Mur ligase middle domain HO345_RS07445 PF01795 MraW methylase family HO345_RS07450 PF02381 MraZ protein, putative antitoxin-like HO345_RS07455 PF00326 Prolyl oligopeptidase family HO345_RS07455 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HO345_RS07490 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HO345_RS07490 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HO345_RS07490 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HO345_RS07500 PF02233 NAD(P) transhydrogenase beta subunit HO345_RS07520 PF01032 FecCD transport family HO345_RS07525 PF00005 ABC transporter HO345_RS07535 PF04055 Radical SAM superfamily HO345_RS07535 PF06969 HemN C-terminal domain HO345_RS07540 PF00118 TCP-1/cpn60 chaperonin family HO345_RS07555 PF01264 Chorismate synthase HO345_RS07560 PF02390 Putative methyltransferase HO345_RS07600 PF01740 STAS domain HO345_RS07620 PF01212 Beta-eliminating lyase HO345_RS07640 PF16925 Tetracyclin repressor-like, C-terminal domain HO345_RS07640 PF00440 Bacterial regulatory proteins, tetR family HO345_RS07650 PF05191 Adenylate kinase, active site lid HO345_RS07665 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HO345_RS07665 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HO345_RS07670 PF02576 RimP N-terminal domain HO345_RS07670 PF17384 RimP C-terminal SH3 domain HO345_RS07675 PF13184 NusA-like KH domain HO345_RS07675 PF08529 NusA N-terminal domain HO345_RS07675 PF00575 S1 RNA binding domain HO345_RS07680 PF04760 Translation initiation factor IF-2, N-terminal region HO345_RS07680 PF00009 Elongation factor Tu GTP binding domain HO345_RS07680 PF11987 Translation-initiation factor 2 HO345_RS07685 PF02033 Ribosome-binding factor A HO345_RS07690 PF01509 TruB family pseudouridylate synthase (N terminal domain) HO345_RS07700 PF02743 Cache domain HO345_RS07700 PF00672 HAMP domain HO345_RS07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS07735 PF02401 LytB protein HO345_RS07740 PF00842 Alanine racemase, C-terminal domain HO345_RS07740 PF01168 Alanine racemase, N-terminal domain HO345_RS07750 PF16258 Domain of unknown function (DUF4912) HO345_RS07765 PF03129 Anticodon binding domain HO345_RS07765 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS07765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HO345_RS07785 PF08340 Domain of unknown function (DUF1732) HO345_RS07785 PF03755 YicC-like family, N-terminal region HO345_RS07790 PF02875 Mur ligase family, glutamate ligase domain HO345_RS07790 PF01225 Mur ligase family, catalytic domain HO345_RS07790 PF08245 Mur ligase middle domain HO345_RS07795 PF02875 Mur ligase family, glutamate ligase domain HO345_RS07795 PF08245 Mur ligase middle domain HO345_RS07800 PF01479 S4 domain HO345_RS07800 PF00849 RNA pseudouridylate synthase HO345_RS07805 PF00849 RNA pseudouridylate synthase HO345_RS07815 PF00398 Ribosomal RNA adenine dimethylase HO345_RS07820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HO345_RS07825 PF01613 Flavin reductase like domain HO345_RS07825 PF00753 Metallo-beta-lactamase superfamily HO345_RS07830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS07835 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS07840 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS07845 PF00005 ABC transporter HO345_RS07845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS07850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS07850 PF00005 ABC transporter HO345_RS07860 PF09334 tRNA synthetases class I (M) HO345_RS07860 PF01588 Putative tRNA binding domain HO345_RS07880 PF00005 ABC transporter HO345_RS07885 PF00005 ABC transporter HO345_RS07890 PF03819 MazG nucleotide pyrophosphohydrolase domain HO345_RS07895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HO345_RS07895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HO345_RS07900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HO345_RS07900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS07900 PF02824 TGS domain HO345_RS07900 PF03129 Anticodon binding domain HO345_RS07910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HO345_RS07910 PF02542 YgbB family HO345_RS07915 PF02542 YgbB family HO345_RS07930 PF00924 Mechanosensitive ion channel HO345_RS07945 PF10509 Galactokinase galactose-binding signature HO345_RS07945 PF08544 GHMP kinases C terminal HO345_RS07950 PF00795 Carbon-nitrogen hydrolase HO345_RS07955 PF00595 PDZ domain HO345_RS07965 PF00072 Response regulator receiver domain HO345_RS07970 PF02021 Uncharacterised protein family UPF0102 HO345_RS07985 PF02403 Seryl-tRNA synthetase N-terminal domain HO345_RS07985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS08005 PF01590 GAF domain HO345_RS08005 PF00158 Sigma-54 interaction domain HO345_RS08030 PF02872 5'-nucleotidase, C-terminal domain HO345_RS08030 PF00149 Calcineurin-like phosphoesterase HO345_RS08030 PF17936 Bacterial Ig domain HO345_RS08045 PF00860 Permease family HO345_RS08055 PF00953 Glycosyl transferase family 4 HO345_RS08060 PF00899 ThiF family HO345_RS08065 PF00986 DNA gyrase B subunit, carboxyl terminus HO345_RS08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS08065 PF01751 Toprim domain HO345_RS08065 PF00204 DNA gyrase B HO345_RS08080 PF03932 CutC family HO345_RS08110 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS08125 PF01136 Peptidase family U32 HO345_RS08125 PF16325 Peptidase family U32 C-terminal domain HO345_RS08130 PF07859 alpha/beta hydrolase fold HO345_RS08135 PF00664 ABC transporter transmembrane region HO345_RS08135 PF00005 ABC transporter HO345_RS08140 PF02743 Cache domain HO345_RS08140 PF00672 HAMP domain HO345_RS08140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS08145 PF01725 Ham1 family HO345_RS08155 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) HO345_RS08160 PF01416 tRNA pseudouridine synthase HO345_RS08170 PF02146 Sir2 family HO345_RS08175 PF08668 HDOD domain HO345_RS08190 PF00005 ABC transporter HO345_RS08195 PF01032 FecCD transport family HO345_RS08200 PF01497 Periplasmic binding protein HO345_RS08205 PF07476 Methylaspartate ammonia-lyase C-terminus HO345_RS08205 PF05034 Methylaspartate ammonia-lyase N-terminus HO345_RS08210 PF06368 Methylaspartate mutase E chain (MutE) HO345_RS08225 PF01743 Poly A polymerase head domain HO345_RS08225 PF12627 Probable RNA and SrmB- binding site of polymerase A HO345_RS08225 PF13735 tRNA nucleotidyltransferase domain 2 putative HO345_RS08235 PF00011 Hsp20/alpha crystallin family HO345_RS08240 PF00035 Double-stranded RNA binding motif HO345_RS08240 PF14622 Ribonuclease-III-like HO345_RS08245 PF00550 Phosphopantetheine attachment site HO345_RS08250 PF01783 Ribosomal L32p protein family HO345_RS08255 PF13941 MutL protein HO345_RS08260 PF02310 B12 binding domain HO345_RS08270 PF16811 TRAP transporter T-component HO345_RS08280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HO345_RS08280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HO345_RS08290 PF13742 OB-fold nucleic acid binding domain HO345_RS08290 PF02601 Exonuclease VII, large subunit HO345_RS08295 PF05362 Lon protease (S16) C-terminal proteolytic domain HO345_RS08295 PF13654 AAA domain HO345_RS08305 PF01814 Hemerythrin HHE cation binding domain HO345_RS08310 PF09371 Tex-like protein N-terminal domain HO345_RS08310 PF16921 Tex protein YqgF-like domain HO345_RS08310 PF00575 S1 RNA binding domain HO345_RS08310 PF17674 HHH domain HO345_RS08320 PF00005 ABC transporter HO345_RS08320 PF17760 UvrA interaction domain HO345_RS08320 PF17755 UvrA DNA-binding domain HO345_RS08325 PF02743 Cache domain HO345_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS08325 PF00672 HAMP domain HO345_RS08330 PF10135 Rod binding protein HO345_RS08335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HO345_RS08335 PF00460 Flagella basal body rod protein HO345_RS08340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HO345_RS08340 PF00460 Flagella basal body rod protein HO345_RS08345 PF00669 Bacterial flagellin N-terminal helical region HO345_RS08345 PF00700 Bacterial flagellin C-terminal helical region HO345_RS08355 PF00156 Phosphoribosyl transferase domain HO345_RS08360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HO345_RS08360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HO345_RS08365 PF01226 Formate/nitrite transporter HO345_RS08375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HO345_RS08375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HO345_RS08380 PF01204 Trehalase HO345_RS08395 PF01812 5-formyltetrahydrofolate cyclo-ligase family HO345_RS08405 PF00830 Ribosomal L28 family HO345_RS08415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS08415 PF00005 ABC transporter HO345_RS08430 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS08430 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS08435 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS08445 PF01180 Dihydroorotate dehydrogenase HO345_RS08455 PF00152 tRNA synthetases class II (D, K and N) HO345_RS08455 PF01336 OB-fold nucleic acid binding domain HO345_RS08460 PF07943 Penicillin-binding protein 5, C-terminal domain HO345_RS08460 PF00768 D-alanyl-D-alanine carboxypeptidase HO345_RS08465 PF04002 RadC-like JAB domain HO345_RS08470 PF00156 Phosphoribosyl transferase domain HO345_RS08475 PF00750 tRNA synthetases class I (R) HO345_RS08475 PF05746 DALR anticodon binding domain HO345_RS08475 PF03485 Arginyl tRNA synthetase N terminal domain HO345_RS08480 PF09285 Elongation factor P, C-terminal HO345_RS08480 PF01132 Elongation factor P (EF-P) OB domain HO345_RS08480 PF08207 Elongation factor P (EF-P) KOW-like domain HO345_RS08490 PF01026 TatD related DNase HO345_RS08495 PF13277 YmdB-like protein HO345_RS08505 PF11799 impB/mucB/samB family C-terminal domain HO345_RS08505 PF00817 impB/mucB/samB family HO345_RS08505 PF11798 IMS family HHH motif HO345_RS08515 PF00226 DnaJ domain HO345_RS08515 PF01556 DnaJ C terminal domain HO345_RS08515 PF00684 DnaJ central domain HO345_RS08520 PF08666 SAF domain HO345_RS08520 PF03102 NeuB family HO345_RS08525 PF07009 NusG domain II HO345_RS08530 PF01734 Patatin-like phospholipase HO345_RS08535 PF03009 Glycerophosphoryl diester phosphodiesterase family HO345_RS08540 PF04536 TPM domain HO345_RS08545 PF04011 LemA family HO345_RS08550 PF02653 Branched-chain amino acid transport system / permease component HO345_RS08555 PF02653 Branched-chain amino acid transport system / permease component HO345_RS08560 PF00005 ABC transporter HO345_RS08565 PF02608 ABC transporter substrate-binding protein PnrA-like HO345_RS08595 PF00113 Enolase, C-terminal TIM barrel domain HO345_RS08595 PF03952 Enolase, N-terminal domain HO345_RS08600 PF00679 Elongation factor G C-terminus HO345_RS08600 PF14492 Elongation Factor G, domain II HO345_RS08600 PF03764 Elongation factor G, domain IV HO345_RS08600 PF00009 Elongation factor Tu GTP binding domain HO345_RS08600 PF03144 Elongation factor Tu domain 2 HO345_RS08610 PF00501 AMP-binding enzyme HO345_RS08610 PF13193 AMP-binding enzyme C-terminal domain HO345_RS08615 PF00877 NlpC/P60 family HO345_RS08625 PF01963 TraB family HO345_RS08630 PF01170 Putative RNA methylase family UPF0020 HO345_RS08630 PF02926 THUMP domain HO345_RS08635 PF03979 Sigma-70 factor, region 1.1 HO345_RS08635 PF00140 Sigma-70 factor, region 1.2 HO345_RS08635 PF04542 Sigma-70 region 2 HO345_RS08635 PF04539 Sigma-70 region 3 HO345_RS08635 PF04545 Sigma-70, region 4 HO345_RS08640 PF00166 Chaperonin 10 Kd subunit HO345_RS08650 PF00871 Acetokinase family HO345_RS08655 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS08660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HO345_RS08660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HO345_RS08670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HO345_RS08670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HO345_RS08675 PF00005 ABC transporter HO345_RS08690 PF01546 Peptidase family M20/M25/M40 HO345_RS08690 PF07687 Peptidase dimerisation domain HO345_RS08710 PF02463 RecF/RecN/SMC N terminal domain HO345_RS08720 PF00005 ABC transporter HO345_RS08720 PF00664 ABC transporter transmembrane region HO345_RS08725 PF00664 ABC transporter transmembrane region HO345_RS08725 PF00005 ABC transporter HO345_RS08735 PF00005 ABC transporter HO345_RS08745 PF00580 UvrD/REP helicase N-terminal domain HO345_RS08745 PF13361 UvrD-like helicase C-terminal domain HO345_RS08775 PF01245 Ribosomal protein L19 HO345_RS08780 PF01746 tRNA (Guanine-1)-methyltransferase HO345_RS08785 PF01782 RimM N-terminal domain HO345_RS08795 PF00886 Ribosomal protein S16 HO345_RS08800 PF02277 Phosphoribosyltransferase HO345_RS08815 PF00005 ABC transporter HO345_RS08815 PF12704 MacB-like periplasmic core domain HO345_RS08815 PF02687 FtsX-like permease family HO345_RS08820 PF09383 NIL domain HO345_RS08820 PF00005 ABC transporter HO345_RS08835 PF02743 Cache domain HO345_RS08835 PF00672 HAMP domain HO345_RS08835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS08850 PF01921 tRNA synthetases class I (K) HO345_RS08855 PF01430 Hsp33 protein HO345_RS08860 PF02570 Precorrin-8X methylmutase HO345_RS08865 PF00664 ABC transporter transmembrane region HO345_RS08865 PF00005 ABC transporter HO345_RS08870 PF00664 ABC transporter transmembrane region HO345_RS08870 PF00005 ABC transporter HO345_RS08875 PF00005 ABC transporter HO345_RS08880 PF00950 ABC 3 transport family HO345_RS08905 PF02568 Thiamine biosynthesis protein (ThiI) HO345_RS08905 PF02926 THUMP domain HO345_RS08910 PF00793 DAHP synthetase I family HO345_RS08915 PF00075 RNase H HO345_RS08920 PF02229 Transcriptional Coactivator p15 (PC4) HO345_RS08925 PF01066 CDP-alcohol phosphatidyltransferase HO345_RS08930 PF09820 Predicted AAA-ATPase HO345_RS08930 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS08935 PF00342 Phosphoglucose isomerase HO345_RS08940 PF01926 50S ribosome-binding GTPase HO345_RS08950 PF00849 RNA pseudouridylate synthase HO345_RS08955 PF00270 DEAD/DEAH box helicase HO345_RS08955 PF00271 Helicase conserved C-terminal domain HO345_RS08955 PF17191 RecG wedge domain HO345_RS08960 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS08965 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS08980 PF03577 Peptidase family C69 HO345_RS08985 PF12729 Four helix bundle sensory module for signal transduction HO345_RS08985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS08985 PF00672 HAMP domain HO345_RS08990 PF12169 DNA polymerase III subunits gamma and tau domain III HO345_RS09005 PF02127 Aminopeptidase I zinc metalloprotease (M18) HO345_RS09010 PF17773 UPF0176 acylphosphatase like domain HO345_RS09010 PF12368 Rhodanase C-terminal HO345_RS09010 PF00581 Rhodanese-like domain HO345_RS09015 PF03880 DbpA RNA binding domain HO345_RS09045 PF03450 CO dehydrogenase flavoprotein C-terminal domain HO345_RS09045 PF00941 FAD binding domain in molybdopterin dehydrogenase HO345_RS09050 PF00111 2Fe-2S iron-sulfur cluster binding domain HO345_RS09050 PF01799 [2Fe-2S] binding domain HO345_RS09060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HO345_RS09075 PF02517 CPBP intramembrane metalloprotease HO345_RS09105 PF02719 Polysaccharide biosynthesis protein HO345_RS09130 PF01625 Peptide methionine sulfoxide reductase HO345_RS09130 PF01641 SelR domain HO345_RS09145 PF02086 D12 class N6 adenine-specific DNA methyltransferase HO345_RS09150 PF01145 SPFH domain / Band 7 family HO345_RS09155 PF01145 SPFH domain / Band 7 family HO345_RS09170 PF00005 ABC transporter HO345_RS09200 PF00005 ABC transporter HO345_RS09205 PF08543 Phosphomethylpyrimidine kinase HO345_RS09220 PF01636 Phosphotransferase enzyme family HO345_RS09230 PF00731 AIR carboxylase HO345_RS09235 PF01259 SAICAR synthetase HO345_RS09245 PF00436 Single-strand binding protein family HO345_RS09250 PF02699 Preprotein translocase subunit HO345_RS09255 PF02355 Protein export membrane protein HO345_RS09260 PF02355 Protein export membrane protein HO345_RS09265 PF00266 Aminotransferase class-V HO345_RS09275 PF01206 Sulfurtransferase TusA HO345_RS09320 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS09320 PF05362 Lon protease (S16) C-terminal proteolytic domain HO345_RS09320 PF02190 ATP-dependent protease La (LON) substrate-binding domain HO345_RS09325 PF05958 tRNA (Uracil-5-)-methyltransferase HO345_RS09335 PF07670 Nucleoside recognition HO345_RS09340 PF00300 Histidine phosphatase superfamily (branch 1) HO345_RS09345 PF01175 Urocanase Rossmann-like domain HO345_RS09345 PF17392 Urocanase C-terminal domain HO345_RS09345 PF17391 Urocanase N-terminal domain HO345_RS09360 PF18693 TRAM domain HO345_RS09360 PF04055 Radical SAM superfamily HO345_RS09360 PF00919 Uncharacterized protein family UPF0004 HO345_RS09380 PF02424 ApbE family HO345_RS09385 PF01252 Signal peptidase (SPase) II HO345_RS09390 PF00027 Cyclic nucleotide-binding domain HO345_RS09390 PF13545 Crp-like helix-turn-helix domain HO345_RS09405 PF05958 tRNA (Uracil-5-)-methyltransferase HO345_RS09410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HO345_RS09430 PF00664 ABC transporter transmembrane region HO345_RS09430 PF00005 ABC transporter HO345_RS09435 PF04954 Siderophore-interacting protein HO345_RS09435 PF00664 ABC transporter transmembrane region HO345_RS09435 PF00005 ABC transporter HO345_RS09435 PF08021 Siderophore-interacting FAD-binding domain HO345_RS09455 PF01432 Peptidase family M3 HO345_RS09455 PF08439 Oligopeptidase F HO345_RS09465 PF02661 Fic/DOC family HO345_RS09465 PF12728 Helix-turn-helix domain HO345_RS09475 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HO345_RS09475 PF01266 FAD dependent oxidoreductase HO345_RS09480 PF04324 BFD-like [2Fe-2S] binding domain HO345_RS09480 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS09490 PF00005 ABC transporter HO345_RS09490 PF00571 CBS domain HO345_RS09495 PF10437 Bacterial lipoate protein ligase C-terminus HO345_RS09495 PF03099 Biotin/lipoate A/B protein ligase family HO345_RS09505 PF00005 ABC transporter HO345_RS09510 PF00155 Aminotransferase class I and II HO345_RS09510 PF00392 Bacterial regulatory proteins, gntR family HO345_RS09515 PF00005 ABC transporter HO345_RS09540 PF06180 Cobalt chelatase (CbiK) HO345_RS09545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HO345_RS09550 PF07685 CobB/CobQ-like glutamine amidotransferase domain HO345_RS09555 PF00672 HAMP domain HO345_RS09555 PF01966 HD domain HO345_RS09575 PF08264 Anticodon-binding domain of tRNA HO345_RS09575 PF00133 tRNA synthetases class I (I, L, M and V) HO345_RS09615 PF08032 RNA 2'-O ribose methyltransferase substrate binding HO345_RS09615 PF00588 SpoU rRNA Methylase family HO345_RS09620 PF13419 Haloacid dehalogenase-like hydrolase HO345_RS09630 PF00571 CBS domain HO345_RS09630 PF01769 Divalent cation transporter HO345_RS09630 PF03448 MgtE intracellular N domain HO345_RS09645 PF04452 RNA methyltransferase HO345_RS09655 PF17932 Tetracyclin repressor-like, C-terminal domain HO345_RS09655 PF00440 Bacterial regulatory proteins, tetR family HO345_RS09660 PF00005 ABC transporter HO345_RS09660 PF00664 ABC transporter transmembrane region HO345_RS09665 PF00664 ABC transporter transmembrane region HO345_RS09665 PF00005 ABC transporter HO345_RS09670 PF00664 ABC transporter transmembrane region HO345_RS09670 PF00005 ABC transporter HO345_RS09690 PF09565 NgoFVII restriction endonuclease HO345_RS09695 PF00145 C-5 cytosine-specific DNA methylase HO345_RS09700 PF03852 DNA mismatch endonuclease Vsr HO345_RS09705 PF00664 ABC transporter transmembrane region HO345_RS09705 PF00005 ABC transporter HO345_RS09710 PF00005 ABC transporter HO345_RS09730 PF14572 Phosphoribosyl synthetase-associated domain HO345_RS09730 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HO345_RS09735 PF00072 Response regulator receiver domain HO345_RS09735 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS09740 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS09750 PF01026 TatD related DNase HO345_RS09755 PF01207 Dihydrouridine synthase (Dus) HO345_RS09765 PF01420 Type I restriction modification DNA specificity domain HO345_RS09770 PF01420 Type I restriction modification DNA specificity domain HO345_RS09775 PF00589 Phage integrase family HO345_RS09775 PF02899 Phage integrase, N-terminal SAM-like domain HO345_RS09785 PF01420 Type I restriction modification DNA specificity domain HO345_RS09790 PF13018 Extended Signal Peptide of Type V secretion system HO345_RS09790 PF02661 Fic/DOC family HO345_RS09790 PF13332 Hemagglutinin repeat HO345_RS09790 PF03543 Yersinia/Haemophilus virulence surface antigen HO345_RS09790 PF05860 haemagglutination activity domain HO345_RS09795 PF02384 N-6 DNA Methylase HO345_RS09795 PF12161 HsdM N-terminal domain HO345_RS09800 PF00271 Helicase conserved C-terminal domain HO345_RS09800 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HO345_RS09800 PF04851 Type III restriction enzyme, res subunit HO345_RS09800 PF08463 EcoEI R protein C-terminal HO345_RS09810 PF13167 GTP-binding GTPase N-terminal HO345_RS09810 PF01926 50S ribosome-binding GTPase HO345_RS09810 PF16360 GTP-binding GTPase Middle Region HO345_RS09830 PF10145 Phage-related minor tail protein HO345_RS09830 PF01464 Transglycosylase SLT domain HO345_RS09830 PF01551 Peptidase family M23 HO345_RS09835 PF02423 Ornithine cyclodeaminase/mu-crystallin family HO345_RS09840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS09910 PF00813 FliP family HO345_RS09920 PF04509 CheC-like family HO345_RS09920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HO345_RS09925 PF02154 Flagellar motor switch protein FliM HO345_RS09925 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HO345_RS09930 PF03748 Flagellar basal body-associated protein FliL HO345_RS09935 PF00691 OmpA family HO345_RS09935 PF13677 Membrane MotB of proton-channel complex MotA/MotB HO345_RS09940 PF01618 MotA/TolQ/ExbB proton channel family HO345_RS09950 PF07559 Flagellar basal body protein FlaE HO345_RS09950 PF00460 Flagella basal body rod protein HO345_RS09950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HO345_RS09955 PF03963 Flagellar hook capping protein - N-terminal region HO345_RS09970 PF00005 ABC transporter HO345_RS09970 PF00664 ABC transporter transmembrane region HO345_RS09980 PF00221 Aromatic amino acid lyase HO345_RS09985 PF02028 BCCT, betaine/carnitine/choline family transporter HO345_RS09990 PF13478 XdhC Rossmann domain HO345_RS09990 PF02625 XdhC and CoxI family HO345_RS10000 PF01799 [2Fe-2S] binding domain HO345_RS10000 PF00111 2Fe-2S iron-sulfur cluster binding domain HO345_RS10010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HO345_RS10010 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HO345_RS10015 PF00005 ABC transporter HO345_RS10020 PF01032 FecCD transport family HO345_RS10040 PF00561 alpha/beta hydrolase fold HO345_RS10060 PF00664 ABC transporter transmembrane region HO345_RS10060 PF00005 ABC transporter HO345_RS10065 PF00664 ABC transporter transmembrane region HO345_RS10065 PF00005 ABC transporter HO345_RS10075 PF03773 Predicted permease HO345_RS10080 PF09323 Domain of unknown function (DUF1980) HO345_RS10085 PF07726 ATPase family associated with various cellular activities (AAA) HO345_RS10085 PF17863 AAA lid domain HO345_RS10125 PF01425 Amidase HO345_RS10130 PF02637 GatB domain HO345_RS10130 PF02934 GatB/GatE catalytic domain HO345_RS10210 PF00270 DEAD/DEAH box helicase HO345_RS10210 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HO345_RS10210 PF17191 RecG wedge domain HO345_RS10220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HO345_RS10220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS10220 PF03129 Anticodon binding domain HO345_RS10250 PF03781 Sulfatase-modifying factor enzyme 1 HO345_RS10290 PF00005 ABC transporter HO345_RS10485 PF01381 Helix-turn-helix HO345_RS10495 PF07804 HipA-like C-terminal domain HO345_RS10515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HO345_RS10520 PF00005 ABC transporter HO345_RS10535 PF02743 Cache domain HO345_RS10535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS10535 PF00672 HAMP domain HO345_RS10550 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS10550 PF09820 Predicted AAA-ATPase HO345_RS10555 PF03063 Prismane/CO dehydrogenase family HO345_RS10570 PF02492 CobW/HypB/UreG, nucleotide-binding domain HO345_RS10575 PF00005 ABC transporter HO345_RS10575 PF12704 MacB-like periplasmic core domain HO345_RS10575 PF02687 FtsX-like permease family HO345_RS10585 PF12671 Putative amidase domain HO345_RS10595 PF01680 SOR/SNZ family HO345_RS10600 PF10509 Galactokinase galactose-binding signature HO345_RS10600 PF00288 GHMP kinases N terminal domain HO345_RS10600 PF08544 GHMP kinases C terminal HO345_RS10605 PF01171 PP-loop family HO345_RS10620 PF07687 Peptidase dimerisation domain HO345_RS10620 PF01546 Peptidase family M20/M25/M40 HO345_RS10635 PF00005 ABC transporter HO345_RS10640 PF00210 Ferritin-like domain HO345_RS10645 PF01791 DeoC/LacD family aldolase HO345_RS10885 PF01702 Queuine tRNA-ribosyltransferase HO345_RS10895 PF11967 Recombination protein O N terminal HO345_RS10895 PF02565 Recombination protein O C terminal HO345_RS10905 PF00271 Helicase conserved C-terminal domain HO345_RS10905 PF00570 HRDC domain HO345_RS10905 PF00270 DEAD/DEAH box helicase HO345_RS10905 PF09382 RQC domain HO345_RS10905 PF16124 RecQ zinc-binding HO345_RS10910 PF02915 Rubrerythrin HO345_RS10945 PF00664 ABC transporter transmembrane region HO345_RS10945 PF00005 ABC transporter HO345_RS10945 PF03412 Peptidase C39 family HO345_RS10950 PF00664 ABC transporter transmembrane region HO345_RS10950 PF00005 ABC transporter HO345_RS10950 PF03412 Peptidase C39 family HO345_RS10985 PF02743 Cache domain HO345_RS10985 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS10985 PF00672 HAMP domain HO345_RS10990 PF01435 Peptidase family M48 HO345_RS11000 PF00970 Oxidoreductase FAD-binding domain HO345_RS11000 PF00175 Oxidoreductase NAD-binding domain HO345_RS11000 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B HO345_RS11005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HO345_RS11005 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS11010 PF09820 Predicted AAA-ATPase HO345_RS11010 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS11015 PF09820 Predicted AAA-ATPase HO345_RS11015 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS11020 PF09820 Predicted AAA-ATPase HO345_RS11020 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS11040 PF13361 UvrD-like helicase C-terminal domain HO345_RS11040 PF12705 PD-(D/E)XK nuclease superfamily HO345_RS11040 PF00580 UvrD/REP helicase N-terminal domain HO345_RS11045 PF12705 PD-(D/E)XK nuclease superfamily HO345_RS11050 PF02080 TrkA-C domain HO345_RS11050 PF02254 TrkA-N domain HO345_RS11055 PF02386 Cation transport protein HO345_RS11060 PF01841 Transglutaminase-like superfamily HO345_RS11075 PF09190 DALR domain HO345_RS11075 PF01406 tRNA synthetases class I (C) catalytic domain HO345_RS11080 PF01565 FAD binding domain HO345_RS11080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HO345_RS11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS11090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HO345_RS11095 PF13538 UvrD-like helicase C-terminal domain HO345_RS11105 PF01555 DNA methylase HO345_RS11105 PF18273 Type III R-M EcoP15I C-terminal domain HO345_RS11110 PF07676 WD40-like Beta Propeller Repeat HO345_RS11110 PF00326 Prolyl oligopeptidase family HO345_RS11125 PF00128 Alpha amylase, catalytic domain HO345_RS11125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HO345_RS11135 PF00266 Aminotransferase class-V HO345_RS11140 PF01761 3-dehydroquinate synthase HO345_RS11145 PF01048 Phosphorylase superfamily HO345_RS11165 PF00005 ABC transporter HO345_RS11170 PF12683 Protein of unknown function (DUF3798) HO345_RS11180 PF00128 Alpha amylase, catalytic domain HO345_RS11195 PF01409 tRNA synthetases class II core domain (F) HO345_RS11200 PF04225 Opacity-associated protein A LysM-like domain HO345_RS11200 PF01551 Peptidase family M23 HO345_RS11210 PF03885 Protein of unknown function (DUF327) HO345_RS11215 PF04468 PSP1 C-terminal conserved region HO345_RS11230 PF03824 High-affinity nickel-transport protein HO345_RS11250 PF00155 Aminotransferase class I and II HO345_RS11270 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin HO345_RS11275 PF01850 PIN domain HO345_RS11280 PF01207 Dihydrouridine synthase (Dus) HO345_RS11295 PF00072 Response regulator receiver domain HO345_RS11295 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS11310 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS11310 PF08448 PAS fold HO345_RS11310 PF00563 EAL domain HO345_RS11315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HO345_RS11315 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HO345_RS11315 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HO345_RS11315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HO345_RS11320 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS11320 PF09820 Predicted AAA-ATPase HO345_RS11325 PF01266 FAD dependent oxidoreductase HO345_RS11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS11330 PF04324 BFD-like [2Fe-2S] binding domain HO345_RS11340 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HO345_RS11340 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HO345_RS11345 PF02743 Cache domain HO345_RS11345 PF00672 HAMP domain HO345_RS11345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS11355 PF01565 FAD binding domain HO345_RS11355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HO345_RS11360 PF01547 Bacterial extracellular solute-binding protein HO345_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11370 PF00005 ABC transporter HO345_RS11370 PF08402 TOBE domain HO345_RS11375 PF13173 AAA domain HO345_RS11375 PF13635 Domain of unknown function (DUF4143) HO345_RS11385 PF07687 Peptidase dimerisation domain HO345_RS11385 PF01546 Peptidase family M20/M25/M40 HO345_RS11390 PF07730 Histidine kinase HO345_RS11395 PF00072 Response regulator receiver domain HO345_RS11395 PF00196 Bacterial regulatory proteins, luxR family HO345_RS11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase HO345_RS11405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HO345_RS11410 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS11415 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS11415 PF00672 HAMP domain HO345_RS11435 PF00294 pfkB family carbohydrate kinase HO345_RS11470 PF00258 Flavodoxin HO345_RS11490 PF00005 ABC transporter HO345_RS11495 PF07702 UTRA domain HO345_RS11495 PF00392 Bacterial regulatory proteins, gntR family HO345_RS11500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS11500 PF00672 HAMP domain HO345_RS11500 PF17202 Single cache domain 3 HO345_RS11505 PF00149 Calcineurin-like phosphoesterase HO345_RS11510 PF13476 AAA domain HO345_RS11515 PF02673 Bacitracin resistance protein BacA HO345_RS11520 PF17854 FtsK alpha domain HO345_RS11520 PF09397 Ftsk gamma domain HO345_RS11520 PF01580 FtsK/SpoIIIE family HO345_RS11525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HO345_RS11525 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HO345_RS11525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HO345_RS11530 PF09820 Predicted AAA-ATPase HO345_RS11530 PF08011 PD-(D/E)XK nuclease superfamily HO345_RS11535 PF01470 Pyroglutamyl peptidase HO345_RS11550 PF02743 Cache domain HO345_RS11550 PF00672 HAMP domain HO345_RS11550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS11555 PF00005 ABC transporter HO345_RS11555 PF08402 TOBE domain HO345_RS11560 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11575 PF00962 Adenosine/AMP deaminase HO345_RS11580 PF01925 Sulfite exporter TauE/SafE HO345_RS11585 PF00892 EamA-like transporter family HO345_RS11595 PF02661 Fic/DOC family HO345_RS11625 PF00664 ABC transporter transmembrane region HO345_RS11625 PF00005 ABC transporter HO345_RS11635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HO345_RS11650 PF00749 tRNA synthetases class I (E and Q), catalytic domain HO345_RS11665 PF02447 GntP family permease HO345_RS11670 PF02595 Glycerate kinase family HO345_RS11675 PF05656 Protein of unknown function (DUF805) HO345_RS11680 PF03600 Citrate transporter HO345_RS11695 PF12557 Cob(I)alamin adenosyltransferase N terminal HO345_RS11695 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HO345_RS11705 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HO345_RS11720 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11725 PF12911 N-terminal TM domain of oligopeptide transport permease C HO345_RS11725 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11730 PF00005 ABC transporter HO345_RS11730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS11735 PF00005 ABC transporter HO345_RS11735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HO345_RS11750 PF07238 PilZ domain HO345_RS11790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HO345_RS11790 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HO345_RS11800 PF00753 Metallo-beta-lactamase superfamily HO345_RS11800 PF16123 Hydroxyacylglutathione hydrolase C-terminus HO345_RS11880 PF02463 RecF/RecN/SMC N terminal domain HO345_RS11885 PF00712 DNA polymerase III beta subunit, N-terminal domain HO345_RS11885 PF02767 DNA polymerase III beta subunit, central domain HO345_RS11885 PF02768 DNA polymerase III beta subunit, C-terminal domain HO345_RS11890 PF01661 Macro domain HO345_RS11895 PF13784 Fic/DOC family N-terminal HO345_RS11895 PF02661 Fic/DOC family HO345_RS11900 PF12008 Type I restriction and modification enzyme - subunit R C terminal HO345_RS11900 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HO345_RS11900 PF18766 SWI2/SNF2 ATPase HO345_RS11910 PF01420 Type I restriction modification DNA specificity domain HO345_RS11915 PF01420 Type I restriction modification DNA specificity domain HO345_RS11925 PF12161 HsdM N-terminal domain HO345_RS11925 PF02384 N-6 DNA Methylase HO345_RS11930 PF00005 ABC transporter HO345_RS11935 PF01966 HD domain HO345_RS11935 PF00013 KH domain HO345_RS11935 PF12072 Domain of unknown function (DUF3552) HO345_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11950 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS11955 PF03459 TOBE domain HO345_RS11955 PF00005 ABC transporter HO345_RS11955 PF17912 MalK OB fold domain HO345_RS11965 PF02504 Fatty acid synthesis protein HO345_RS11970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HO345_RS11985 PF09383 NIL domain HO345_RS11985 PF00005 ABC transporter HO345_RS12000 PF02511 Thymidylate synthase complementing protein HO345_RS12005 PF02386 Cation transport protein HO345_RS12010 PF02080 TrkA-C domain HO345_RS12010 PF02254 TrkA-N domain HO345_RS12020 PF00664 ABC transporter transmembrane region HO345_RS12020 PF00005 ABC transporter HO345_RS12035 PF17863 AAA lid domain HO345_RS12035 PF07726 ATPase family associated with various cellular activities (AAA) HO345_RS12040 PF00571 CBS domain HO345_RS12040 PF03471 Transporter associated domain HO345_RS12040 PF01595 Cyclin M transmembrane N-terminal domain HO345_RS12045 PF00571 CBS domain HO345_RS12045 PF01595 Cyclin M transmembrane N-terminal domain HO345_RS12045 PF03471 Transporter associated domain HO345_RS12070 PF00570 HRDC domain HO345_RS12070 PF00271 Helicase conserved C-terminal domain HO345_RS12070 PF00270 DEAD/DEAH box helicase HO345_RS12070 PF09382 RQC domain HO345_RS12070 PF16124 RecQ zinc-binding HO345_RS12075 PF00440 Bacterial regulatory proteins, tetR family HO345_RS12080 PF01554 MatE HO345_RS12090 PF00268 Ribonucleotide reductase, small chain HO345_RS12095 PF01594 AI-2E family transporter HO345_RS12100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HO345_RS12110 PF00440 Bacterial regulatory proteins, tetR family HO345_RS12135 PF08021 Siderophore-interacting FAD-binding domain HO345_RS12135 PF00005 ABC transporter HO345_RS12135 PF00664 ABC transporter transmembrane region HO345_RS12135 PF04954 Siderophore-interacting protein HO345_RS12140 PF00664 ABC transporter transmembrane region HO345_RS12140 PF00005 ABC transporter HO345_RS12175 PF01047 MarR family HO345_RS12195 PF00005 ABC transporter HO345_RS12205 PF01212 Beta-eliminating lyase HO345_RS12210 PF01343 Peptidase family S49 HO345_RS12215 PF06071 Protein of unknown function (DUF933) HO345_RS12215 PF01926 50S ribosome-binding GTPase HO345_RS12235 PF00990 Diguanylate cyclase, GGDEF domain HO345_RS12240 PF02789 Cytosol aminopeptidase family, N-terminal domain HO345_RS12240 PF00883 Cytosol aminopeptidase family, catalytic domain HO345_RS12250 PF07837 Formiminotransferase domain, N-terminal subdomain HO345_RS12250 PF02971 Formiminotransferase domain HO345_RS12255 PF00521 DNA gyrase/topoisomerase IV, subunit A HO345_RS12255 PF03989 DNA gyrase C-terminal domain, beta-propeller HO345_RS12260 PF02254 TrkA-N domain HO345_RS12260 PF02080 TrkA-C domain HO345_RS12270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HO345_RS12285 PF03144 Elongation factor Tu domain 2 HO345_RS12285 PF00009 Elongation factor Tu GTP binding domain HO345_RS12285 PF03764 Elongation factor G, domain IV HO345_RS12285 PF14492 Elongation Factor G, domain II HO345_RS12285 PF00679 Elongation factor G C-terminus HO345_RS12300 PF00274 Fructose-bisphosphate aldolase class-I HO345_RS12305 PF02867 Ribonucleotide reductase, barrel domain HO345_RS12305 PF03477 ATP cone domain HO345_RS12305 PF00317 Ribonucleotide reductase, all-alpha domain HO345_RS12310 PF03023 Lipid II flippase MurJ HO345_RS12315 PF00672 HAMP domain HO345_RS12315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS12320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS12320 PF00672 HAMP domain HO345_RS12320 PF02743 Cache domain HO345_RS12325 PF00440 Bacterial regulatory proteins, tetR family HO345_RS12325 PF08359 YsiA-like protein, C-terminal region HO345_RS12330 PF00391 PEP-utilising enzyme, mobile domain HO345_RS12330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HO345_RS12335 PF01554 MatE HO345_RS12340 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HO345_RS12340 PF00056 lactate/malate dehydrogenase, NAD binding domain HO345_RS12345 PF02502 Ribose/Galactose Isomerase HO345_RS12360 PF02525 Flavodoxin-like fold HO345_RS12375 PF00664 ABC transporter transmembrane region HO345_RS12375 PF00005 ABC transporter HO345_RS12380 PF00005 ABC transporter HO345_RS12380 PF00664 ABC transporter transmembrane region HO345_RS12385 PF03616 Sodium/glutamate symporter HO345_RS12400 PF00005 ABC transporter HO345_RS12400 PF00664 ABC transporter transmembrane region HO345_RS12420 PF02086 D12 class N6 adenine-specific DNA methyltransferase HO345_RS12425 PF02086 D12 class N6 adenine-specific DNA methyltransferase HO345_RS12430 PF02875 Mur ligase family, glutamate ligase domain HO345_RS12430 PF08245 Mur ligase middle domain HO345_RS12450 PF00664 ABC transporter transmembrane region HO345_RS12450 PF00005 ABC transporter HO345_RS12450 PF03412 Peptidase C39 family HO345_RS12455 PF00664 ABC transporter transmembrane region HO345_RS12455 PF00005 ABC transporter HO345_RS12455 PF03412 Peptidase C39 family HO345_RS12460 PF13439 Glycosyltransferase Family 4 HO345_RS12460 PF00534 Glycosyl transferases group 1 HO345_RS12465 PF08402 TOBE domain HO345_RS12465 PF00005 ABC transporter HO345_RS12470 PF00528 Binding-protein-dependent transport system inner membrane component HO345_RS12520 PF01869 BadF/BadG/BcrA/BcrD ATPase family HO345_RS12530 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HO345_RS12545 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component HO345_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HO345_RS12550 PF03466 LysR substrate binding domain HO345_RS12555 PF00672 HAMP domain HO345_RS12555 PF00211 Adenylate and Guanylate cyclase catalytic domain HO345_RS12555 PF02743 Cache domain HO345_RS12575 PF02896 PEP-utilising enzyme, TIM barrel domain HO345_RS12575 PF05524 PEP-utilising enzyme, N-terminal HO345_RS12575 PF00391 PEP-utilising enzyme, mobile domain HO345_RS12580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HO345_RS12580 PF01926 50S ribosome-binding GTPase HO345_RS12595 PF02203 Tar ligand binding domain homologue HO345_RS12595 PF00672 HAMP domain HO345_RS12595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HO345_RS12600 PF01136 Peptidase family U32 HO345_RS12600 PF12392 Collagenase HO345_RS12605 PF03979 Sigma-70 factor, region 1.1 HO345_RS12605 PF04542 Sigma-70 region 2 HO345_RS12605 PF04539 Sigma-70 region 3 HO345_RS12605 PF00140 Sigma-70 factor, region 1.2 HO345_RS12605 PF04545 Sigma-70, region 4 HO345_RS12615 PF01546 Peptidase family M20/M25/M40 HO345_RS12615 PF07687 Peptidase dimerisation domain HO345_RS12620 PF00027 Cyclic nucleotide-binding domain HO345_RS12620 PF13545 Crp-like helix-turn-helix domain HO345_RS12635 PF00365 Phosphofructokinase HO345_RS12685 PF01192 RNA polymerase Rpb6 HO345_RS12690 PF00771 FHIPEP family HO345_RS12695 PF01312 FlhB HrpN YscU SpaS Family HO345_RS12700 PF01311 Bacterial export proteins, family 1 HO345_RS12705 PF01313 Bacterial export proteins, family 3 HO345_RS12725 PF00753 Metallo-beta-lactamase superfamily HO345_RS12725 PF16123 Hydroxyacylglutathione hydrolase C-terminus HO345_RS12730 PF01048 Phosphorylase superfamily HO345_RS12765 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS12765 PF17862 AAA+ lid domain HO345_RS12765 PF01434 Peptidase family M41 HO345_RS12770 PF13088 BNR repeat-like domain HO345_RS12770 PF02973 Sialidase, N-terminal domain HO345_RS12770 PF04650 YSIRK type signal peptide HO345_RS12795 PF01979 Amidohydrolase family HO345_RS12805 PF13176 Tetratricopeptide repeat HO345_RS12805 PF13174 Tetratricopeptide repeat HO345_RS12810 PF01515 Phosphate acetyl/butaryl transferase HO345_RS12815 PF02237 Biotin protein ligase C terminal domain HO345_RS12815 PF03099 Biotin/lipoate A/B protein ligase family HO345_RS12815 PF08279 HTH domain HO345_RS12820 PF00501 AMP-binding enzyme HO345_RS12820 PF13193 AMP-binding enzyme C-terminal domain HO345_RS12830 PF02801 Beta-ketoacyl synthase, C-terminal domain HO345_RS12830 PF00109 Beta-ketoacyl synthase, N-terminal domain HO345_RS12875 PF01230 HIT domain HO345_RS12890 PF04397 LytTr DNA-binding domain HO345_RS12890 PF00072 Response regulator receiver domain HO345_RS12905 PF01790 Prolipoprotein diacylglyceryl transferase HO345_RS12910 PF00005 ABC transporter HO345_RS12915 PF00005 ABC transporter HO345_RS12940 PF00933 Glycosyl hydrolase family 3 N terminal domain HO345_RS12940 PF01915 Glycosyl hydrolase family 3 C-terminal domain HO345_RS12960 PF03129 Anticodon binding domain HO345_RS12960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HO345_RS12965 PF01268 Formate--tetrahydrofolate ligase HO345_RS12970 PF00756 Putative esterase HO345_RS12970 PF01476 LysM domain HO345_RS12975 PF00004 ATPase family associated with various cellular activities (AAA) HO345_RS12975 PF16193 AAA C-terminal domain HO345_RS12975 PF12002 MgsA AAA+ ATPase C terminal HO345_RS12990 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HO345_RS12990 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HO345_RS12995 PF02554 Carbon starvation protein CstA HO345_RS13000 PF10417 C-terminal domain of 1-Cys peroxiredoxin HO345_RS13000 PF00578 AhpC/TSA family HO345_RS13005 PF00293 NUDIX domain HO345_RS13015 PF00403 Heavy-metal-associated domain HO345_RS13025 PF12419 SNF2 Helicase protein HO345_RS13025 PF00271 Helicase conserved C-terminal domain HO345_RS13025 PF00176 SNF2 family N-terminal domain HO345_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HO345_RS13045 PF00204 DNA gyrase B HO345_RS13045 PF00986 DNA gyrase B subunit, carboxyl terminus HO345_RS13045 PF01751 Toprim domain