locus-tag class description TPCCA_RS00015 PF11638 DnaA N-terminal domain TPCCA_RS00015 PF00308 Bacterial dnaA protein TPCCA_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix TPCCA_RS00020 PF02767 DNA polymerase III beta subunit, central domain TPCCA_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain TPCCA_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain TPCCA_RS00025 PF02463 RecF/RecN/SMC N terminal domain TPCCA_RS00030 PF05258 Dna[CI] antecedent, DciA TPCCA_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller TPCCA_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A TPCCA_RS00045 PF12683 Protein of unknown function (DUF3798) TPCCA_RS00060 PF12683 Protein of unknown function (DUF3798) TPCCA_RS00065 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TPCCA_RS00065 PF03484 tRNA synthetase B5 domain TPCCA_RS00070 PF13654 AAA domain TPCCA_RS00070 PF05362 Lon protease (S16) C-terminal proteolytic domain TPCCA_RS00120 PF00209 Sodium:neurotransmitter symporter family TPCCA_RS00130 PF05193 Peptidase M16 inactive domain TPCCA_RS00130 PF00675 Insulinase (Peptidase family M16) TPCCA_RS00130 PF08367 Peptidase M16C associated TPCCA_RS00135 PF14841 FliG middle domain TPCCA_RS00135 PF01706 FliG C-terminal domain TPCCA_RS00135 PF14842 FliG N-terminal domain TPCCA_RS00140 PF01595 Cyclin M transmembrane N-terminal domain TPCCA_RS00140 PF03471 Transporter associated domain TPCCA_RS00140 PF00571 CBS domain TPCCA_RS00145 PF00571 CBS domain TPCCA_RS00145 PF03471 Transporter associated domain TPCCA_RS00145 PF01595 Cyclin M transmembrane N-terminal domain TPCCA_RS00150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPCCA_RS00155 PF00118 TCP-1/cpn60 chaperonin family TPCCA_RS00160 PF04452 RNA methyltransferase TPCCA_RS00170 PF01297 Zinc-uptake complex component A periplasmic TPCCA_RS00175 PF00005 ABC transporter TPCCA_RS00180 PF00950 ABC 3 transport family TPCCA_RS00185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TPCCA_RS00185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TPCCA_RS00200 PF00672 HAMP domain TPCCA_RS00200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_RS00205 PF01476 LysM domain TPCCA_RS00215 PF01134 Glucose inhibited division protein A TPCCA_RS00215 PF13932 GidA associated domain TPCCA_RS00220 PF00962 Adenosine/AMP deaminase TPCCA_RS00225 PF04468 PSP1 C-terminal conserved region TPCCA_RS00240 PF08525 Opacity-associated protein A N-terminal motif TPCCA_RS00240 PF01551 Peptidase family M23 TPCCA_RS00240 PF01476 LysM domain TPCCA_RS00250 PF03462 PCRF domain TPCCA_RS00250 PF00472 RF-1 domain TPCCA_RS00255 PF17827 PrmC N-terminal domain TPCCA_RS00255 PF05175 Methyltransferase small domain TPCCA_RS00260 PF00268 Ribonucleotide reductase, small chain TPCCA_RS00275 PF00364 Biotin-requiring enzyme TPCCA_RS00275 PF00682 HMGL-like TPCCA_RS00275 PF02436 Conserved carboxylase domain TPCCA_RS00280 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TPCCA_RS00285 PF03796 DnaB-like helicase C terminal domain TPCCA_RS00285 PF00772 DnaB-like helicase N terminal domain TPCCA_RS00290 PF01281 Ribosomal protein L9, N-terminal domain TPCCA_RS00290 PF03948 Ribosomal protein L9, C-terminal domain TPCCA_RS00295 PF01084 Ribosomal protein S18 TPCCA_RS00300 PF00436 Single-strand binding protein family TPCCA_RS00305 PF01250 Ribosomal protein S6 TPCCA_RS00330 PF04055 Radical SAM superfamily TPCCA_RS00345 PF17871 AAA lid domain TPCCA_RS00345 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_RS00345 PF02861 Clp amino terminal domain, pathogenicity island component TPCCA_RS00345 PF07724 AAA domain (Cdc48 subfamily) TPCCA_RS00345 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_RS00355 PF08668 HDOD domain TPCCA_RS00365 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS00375 PF02719 Polysaccharide biosynthesis protein TPCCA_RS00380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPCCA_RS00395 PF00941 FAD binding domain in molybdopterin dehydrogenase TPCCA_RS00400 PF00158 Sigma-54 interaction domain TPCCA_RS00400 PF01590 GAF domain TPCCA_RS00415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPCCA_RS00415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TPCCA_RS00420 PF07238 PilZ domain TPCCA_RS00435 PF13545 Crp-like helix-turn-helix domain TPCCA_RS00435 PF00027 Cyclic nucleotide-binding domain TPCCA_RS00440 PF01565 FAD binding domain TPCCA_RS00440 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TPCCA_RS00445 PF01406 tRNA synthetases class I (C) catalytic domain TPCCA_RS00450 PF04545 Sigma-70, region 4 TPCCA_RS00450 PF04539 Sigma-70 region 3 TPCCA_RS00450 PF04542 Sigma-70 region 2 TPCCA_RS00460 PF01515 Phosphate acetyl/butaryl transferase TPCCA_RS00465 PF13174 Tetratricopeptide repeat TPCCA_RS00465 PF13176 Tetratricopeptide repeat TPCCA_RS00475 PF01176 Translation initiation factor 1A / IF-1 TPCCA_RS00480 PF00684 DnaJ central domain TPCCA_RS00480 PF01556 DnaJ C terminal domain TPCCA_RS00480 PF00226 DnaJ domain TPCCA_RS00485 PF00696 Amino acid kinase family TPCCA_RS00490 PF00578 AhpC/TSA family TPCCA_RS00495 PF02683 Cytochrome C biogenesis protein transmembrane region TPCCA_RS00500 PF13361 UvrD-like helicase C-terminal domain TPCCA_RS00500 PF00580 UvrD/REP helicase N-terminal domain TPCCA_RS00510 PF00149 Calcineurin-like phosphoesterase TPCCA_RS00510 PF02872 5'-nucleotidase, C-terminal domain TPCCA_RS00515 PF00476 DNA polymerase family A TPCCA_RS00515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TPCCA_RS00515 PF01612 3'-5' exonuclease TPCCA_RS00515 PF01367 5'-3' exonuclease, C-terminal SAM fold TPCCA_RS00520 PF02028 BCCT, betaine/carnitine/choline family transporter TPCCA_RS00525 PF12804 MobA-like NTP transferase domain TPCCA_RS00530 PF00365 Phosphofructokinase TPCCA_RS00535 PF00588 SpoU rRNA Methylase family TPCCA_RS00535 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPCCA_RS00555 PF17239 Family of unknown function (DUF5312) TPCCA_RS00560 PF04963 Sigma-54 factor, core binding domain TPCCA_RS00560 PF04552 Sigma-54, DNA binding domain TPCCA_RS00560 PF00309 Sigma-54 factor, Activator interacting domain (AID) TPCCA_RS00565 PF03051 Peptidase C1-like family TPCCA_RS00570 PF01145 SPFH domain / Band 7 family TPCCA_RS00575 PF01145 SPFH domain / Band 7 family TPCCA_RS00580 PF08543 Phosphomethylpyrimidine kinase TPCCA_RS00585 PF04851 Type III restriction enzyme, res subunit TPCCA_RS00585 PF02151 UvrB/uvrC motif TPCCA_RS00585 PF12344 Ultra-violet resistance protein B TPCCA_RS00585 PF17757 UvrB interaction domain TPCCA_RS00585 PF00271 Helicase conserved C-terminal domain TPCCA_RS00600 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS00605 PF09383 NIL domain TPCCA_RS00605 PF00005 ABC transporter TPCCA_RS00620 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain TPCCA_RS00620 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain TPCCA_RS00630 PF06071 Protein of unknown function (DUF933) TPCCA_RS00630 PF01926 50S ribosome-binding GTPase TPCCA_RS00635 PF03372 Endonuclease/Exonuclease/phosphatase family TPCCA_RS00700 PF02254 TrkA-N domain TPCCA_RS00700 PF02080 TrkA-C domain TPCCA_RS00705 PF02386 Cation transport protein TPCCA_RS00710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TPCCA_RS00710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TPCCA_RS00715 PF08402 TOBE domain TPCCA_RS00715 PF00005 ABC transporter TPCCA_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS00725 PF01547 Bacterial extracellular solute-binding protein TPCCA_RS00730 PF00501 AMP-binding enzyme TPCCA_RS00755 PF09094 Domain of unknown function (DUF1925) TPCCA_RS00755 PF03065 Glycosyl hydrolase family 57 TPCCA_RS00755 PF09095 Domain of unknown function (DUF1926) TPCCA_RS00785 PF02681 Divergent PAP2 family TPCCA_RS00820 PF04073 Aminoacyl-tRNA editing domain TPCCA_RS00820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_RS00820 PF03129 Anticodon binding domain TPCCA_RS00825 PF17864 RuvB AAA lid domain TPCCA_RS00825 PF05491 RuvB C-terminal winged helix domain TPCCA_RS00825 PF05496 Holliday junction DNA helicase RuvB P-loop domain TPCCA_RS00830 PF01297 Zinc-uptake complex component A periplasmic TPCCA_RS00835 PF00005 ABC transporter TPCCA_RS00840 PF00950 ABC 3 transport family TPCCA_RS00845 PF00950 ABC 3 transport family TPCCA_RS00850 PF18357 Diphteria toxin repressor SH3 domain TPCCA_RS00850 PF01325 Iron dependent repressor, N-terminal DNA binding domain TPCCA_RS00850 PF02742 Iron dependent repressor, metal binding and dimerisation domain TPCCA_RS00855 PF00300 Histidine phosphatase superfamily (branch 1) TPCCA_RS00865 PF01048 Phosphorylase superfamily TPCCA_RS00870 PF04205 FMN-binding domain TPCCA_RS00885 PF01973 Protein of unknown function DUF115 TPCCA_RS00900 PF04977 Septum formation initiator TPCCA_RS00905 PF01300 Telomere recombination TPCCA_RS00915 PF01668 SmpB protein TPCCA_RS00920 PF10502 Signal peptidase, peptidase S26 TPCCA_RS00925 PF04055 Radical SAM superfamily TPCCA_RS00925 PF06969 HemN C-terminal domain TPCCA_RS00930 PF03143 Elongation factor Tu C-terminal domain TPCCA_RS00930 PF00009 Elongation factor Tu GTP binding domain TPCCA_RS00930 PF03144 Elongation factor Tu domain 2 TPCCA_RS00935 PF00338 Ribosomal protein S10p/S20e TPCCA_RS00940 PF00297 Ribosomal protein L3 TPCCA_RS00945 PF00573 Ribosomal protein L4/L1 family TPCCA_RS00950 PF00276 Ribosomal protein L23 TPCCA_RS00955 PF00181 Ribosomal Proteins L2, RNA binding domain TPCCA_RS00955 PF03947 Ribosomal Proteins L2, C-terminal domain TPCCA_RS00960 PF00203 Ribosomal protein S19 TPCCA_RS00965 PF00237 Ribosomal protein L22p/L17e TPCCA_RS00970 PF07650 KH domain TPCCA_RS00970 PF00189 Ribosomal protein S3, C-terminal domain TPCCA_RS00975 PF00252 Ribosomal protein L16p/L10e TPCCA_RS00980 PF00831 Ribosomal L29 protein TPCCA_RS00985 PF00366 Ribosomal protein S17 TPCCA_RS00990 PF00238 Ribosomal protein L14p/L23e TPCCA_RS00995 PF00467 KOW motif TPCCA_RS00995 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TPCCA_RS01000 PF00281 Ribosomal protein L5 TPCCA_RS01000 PF00673 ribosomal L5P family C-terminus TPCCA_RS01005 PF00410 Ribosomal protein S8 TPCCA_RS01010 PF00347 Ribosomal protein L6 TPCCA_RS01015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TPCCA_RS01020 PF00333 Ribosomal protein S5, N-terminal domain TPCCA_RS01020 PF03719 Ribosomal protein S5, C-terminal domain TPCCA_RS01025 PF00327 Ribosomal protein L30p/L7e TPCCA_RS01030 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TPCCA_RS01035 PF00344 SecY translocase TPCCA_RS01040 PF00416 Ribosomal protein S13/S18 TPCCA_RS01045 PF00411 Ribosomal protein S11 TPCCA_RS01050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TPCCA_RS01050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TPCCA_RS01050 PF01000 RNA polymerase Rpb3/RpoA insert domain TPCCA_RS01055 PF01196 Ribosomal protein L17 TPCCA_RS01065 PF01025 GrpE TPCCA_RS01070 PF00012 Hsp70 protein TPCCA_RS01075 PF00226 DnaJ domain TPCCA_RS01075 PF01556 DnaJ C terminal domain TPCCA_RS01075 PF00684 DnaJ central domain TPCCA_RS01135 PF02361 Cobalt transport protein TPCCA_RS01140 PF00005 ABC transporter TPCCA_RS01145 PF02632 BioY family TPCCA_RS01150 PF03167 Uracil DNA glycosylase superfamily TPCCA_RS01155 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TPCCA_RS01155 PF18074 Primosomal protein N C-terminal domain TPCCA_RS01155 PF17764 3′ DNA-binding domain (3′BD) TPCCA_RS01155 PF00271 Helicase conserved C-terminal domain TPCCA_RS01155 PF00270 DEAD/DEAH box helicase TPCCA_RS01160 PF00849 RNA pseudouridylate synthase TPCCA_RS01160 PF01479 S4 domain TPCCA_RS01175 PF00471 Ribosomal protein L33 TPCCA_RS01185 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TPCCA_RS01190 PF02357 Transcription termination factor nusG TPCCA_RS01190 PF00467 KOW motif TPCCA_RS01195 PF00298 Ribosomal protein L11, RNA binding domain TPCCA_RS01195 PF03946 Ribosomal protein L11, N-terminal domain TPCCA_RS01200 PF00687 Ribosomal protein L1p/L10e family TPCCA_RS01205 PF00466 Ribosomal protein L10 TPCCA_RS01210 PF16320 Ribosomal protein L7/L12 dimerisation domain TPCCA_RS01210 PF00542 Ribosomal protein L7/L12 C-terminal domain TPCCA_RS01215 PF04561 RNA polymerase Rpb2, domain 2 TPCCA_RS01215 PF04565 RNA polymerase Rpb2, domain 3 TPCCA_RS01215 PF04560 RNA polymerase Rpb2, domain 7 TPCCA_RS01215 PF04563 RNA polymerase beta subunit TPCCA_RS01215 PF10385 RNA polymerase beta subunit external 1 domain TPCCA_RS01215 PF00562 RNA polymerase Rpb2, domain 6 TPCCA_RS01220 PF05000 RNA polymerase Rpb1, domain 4 TPCCA_RS01220 PF00623 RNA polymerase Rpb1, domain 2 TPCCA_RS01220 PF04998 RNA polymerase Rpb1, domain 5 TPCCA_RS01220 PF04997 RNA polymerase Rpb1, domain 1 TPCCA_RS01220 PF04983 RNA polymerase Rpb1, domain 3 TPCCA_RS01225 PF00164 Ribosomal protein S12/S23 TPCCA_RS01230 PF00177 Ribosomal protein S7p/S5e TPCCA_RS01240 PF00092 von Willebrand factor type A domain TPCCA_RS01245 PF01520 N-acetylmuramoyl-L-alanine amidase TPCCA_RS01255 PF04620 Flagellar filament outer layer protein Flaa TPCCA_RS01260 PF00216 Bacterial DNA-binding protein TPCCA_RS01265 PF00795 Carbon-nitrogen hydrolase TPCCA_RS01275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS01275 PF07498 Rho termination factor, N-terminal domain TPCCA_RS01275 PF07497 Rho termination factor, RNA-binding domain TPCCA_RS01280 PF01197 Ribosomal protein L31 TPCCA_RS01285 PF01066 CDP-alcohol phosphatidyltransferase TPCCA_RS01290 PF03009 Glycerophosphoryl diester phosphodiesterase family TPCCA_RS01305 PF08239 Bacterial SH3 domain TPCCA_RS01315 PF13545 Crp-like helix-turn-helix domain TPCCA_RS01315 PF00027 Cyclic nucleotide-binding domain TPCCA_RS01325 PF01791 DeoC/LacD family aldolase TPCCA_RS01330 PF05525 Branched-chain amino acid transport protein TPCCA_RS01365 PF04055 Radical SAM superfamily TPCCA_RS01365 PF00919 Uncharacterized protein family UPF0004 TPCCA_RS01370 PF12627 Probable RNA and SrmB- binding site of polymerase A TPCCA_RS01370 PF01743 Poly A polymerase head domain TPCCA_RS01370 PF13735 tRNA nucleotidyltransferase domain 2 putative TPCCA_RS01375 PF17762 HTH domain found in ParB protein TPCCA_RS01375 PF02195 ParB-like nuclease domain TPCCA_RS01380 PF13614 AAA domain TPCCA_RS01405 PF13180 PDZ domain TPCCA_RS01405 PF03572 Peptidase family S41 TPCCA_RS01410 PF00575 S1 RNA binding domain TPCCA_RS01420 PF01467 Cytidylyltransferase-like TPCCA_RS01425 PF13186 Iron-sulfur cluster-binding domain TPCCA_RS01435 PF02348 Cytidylyltransferase TPCCA_RS01450 PF00691 OmpA family TPCCA_RS01455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TPCCA_RS01455 PF14572 Phosphoribosyl synthetase-associated domain TPCCA_RS01465 PF01121 Dephospho-CoA kinase TPCCA_RS01475 PF02608 ABC transporter substrate-binding protein PnrA-like TPCCA_RS01480 PF00005 ABC transporter TPCCA_RS01485 PF02653 Branched-chain amino acid transport system / permease component TPCCA_RS01490 PF02653 Branched-chain amino acid transport system / permease component TPCCA_RS01495 PF08676 MutL C terminal dimerisation domain TPCCA_RS01495 PF01119 DNA mismatch repair protein, C-terminal domain TPCCA_RS01505 PF06418 CTP synthase N-terminus TPCCA_RS01505 PF00117 Glutamine amidotransferase class-I TPCCA_RS01510 PF00163 Ribosomal protein S4/S9 N-terminal domain TPCCA_RS01510 PF01479 S4 domain TPCCA_RS01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPCCA_RS01545 PF10895 Domain of unknown function (DUF2715) TPCCA_RS01550 PF10895 Domain of unknown function (DUF2715) TPCCA_RS01560 PF02608 ABC transporter substrate-binding protein PnrA-like TPCCA_RS01565 PF00005 ABC transporter TPCCA_RS01570 PF02653 Branched-chain amino acid transport system / permease component TPCCA_RS01575 PF02653 Branched-chain amino acid transport system / permease component TPCCA_RS01585 PF07244 Surface antigen variable number repeat TPCCA_RS01585 PF01103 Surface antigen TPCCA_RS01595 PF05192 MutS domain III TPCCA_RS01595 PF05188 MutS domain II TPCCA_RS01595 PF01624 MutS domain I TPCCA_RS01595 PF05190 MutS family domain IV TPCCA_RS01595 PF00488 MutS domain V TPCCA_RS01625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain TPCCA_RS01625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TPCCA_RS01640 PF02517 CPBP intramembrane metalloprotease TPCCA_RS01650 PF00398 Ribosomal RNA adenine dimethylase TPCCA_RS01660 PF00849 RNA pseudouridylate synthase TPCCA_RS01665 PF08245 Mur ligase middle domain TPCCA_RS01665 PF02875 Mur ligase family, glutamate ligase domain TPCCA_RS01670 PF01225 Mur ligase family, catalytic domain TPCCA_RS01670 PF02875 Mur ligase family, glutamate ligase domain TPCCA_RS01670 PF08245 Mur ligase middle domain TPCCA_RS01680 PF14815 NUDIX domain TPCCA_RS01680 PF00633 Helix-hairpin-helix motif TPCCA_RS01680 PF00730 HhH-GPD superfamily base excision DNA repair protein TPCCA_RS01685 PF17757 UvrB interaction domain TPCCA_RS01685 PF02559 CarD-like/TRCF domain TPCCA_RS01685 PF00270 DEAD/DEAH box helicase TPCCA_RS01685 PF00271 Helicase conserved C-terminal domain TPCCA_RS01685 PF03461 TRCF domain TPCCA_RS01690 PF00953 Glycosyl transferase family 4 TPCCA_RS01700 PF10895 Domain of unknown function (DUF2715) TPCCA_RS01710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPCCA_RS01715 PF00171 Aldehyde dehydrogenase family TPCCA_RS01720 PF00696 Amino acid kinase family TPCCA_RS01725 PF02229 Transcriptional Coactivator p15 (PC4) TPCCA_RS01730 PF00075 RNase H TPCCA_RS01735 PF02223 Thymidylate kinase TPCCA_RS01750 PF08279 HTH domain TPCCA_RS01750 PF03099 Biotin/lipoate A/B protein ligase family TPCCA_RS01750 PF02237 Biotin protein ligase C terminal domain TPCCA_RS01755 PF03065 Glycosyl hydrolase family 57 TPCCA_RS01755 PF09210 Domain of unknown function (DUF1957) TPCCA_RS01775 PF07194 P2 response regulator binding domain TPCCA_RS01775 PF01627 Hpt domain TPCCA_RS01775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_RS01775 PF02895 Signal transducing histidine kinase, homodimeric domain TPCCA_RS01775 PF01584 CheW-like domain TPCCA_RS01780 PF01584 CheW-like domain TPCCA_RS01790 PF00072 Response regulator receiver domain TPCCA_RS01800 PF06470 SMC proteins Flexible Hinge Domain TPCCA_RS01800 PF02463 RecF/RecN/SMC N terminal domain TPCCA_RS01810 PF13525 Outer membrane lipoprotein TPCCA_RS01820 PF00288 GHMP kinases N terminal domain TPCCA_RS01830 PF14693 Ribosomal protein TL5, C-terminal domain TPCCA_RS01830 PF01386 Ribosomal L25p family TPCCA_RS01835 PF01171 PP-loop family TPCCA_RS01860 PF01043 SecA preprotein cross-linking domain TPCCA_RS01860 PF07517 SecA DEAD-like domain TPCCA_RS01860 PF02810 SEC-C motif TPCCA_RS01860 PF07516 SecA Wing and Scaffold domain TPCCA_RS01870 PF09529 Integral membrane protein (intg_mem_TP0381) TPCCA_RS01875 PF02381 MraZ protein, putative antitoxin-like TPCCA_RS01880 PF01795 MraW methylase family TPCCA_RS01890 PF02875 Mur ligase family, glutamate ligase domain TPCCA_RS01890 PF01225 Mur ligase family, catalytic domain TPCCA_RS01890 PF08245 Mur ligase middle domain TPCCA_RS01895 PF01098 Cell cycle protein TPCCA_RS01900 PF03799 Cell division protein FtsQ TPCCA_RS01900 PF08478 POTRA domain, FtsQ-type TPCCA_RS01905 PF02491 SHS2 domain inserted in FTSA TPCCA_RS01910 PF12327 FtsZ family, C-terminal domain TPCCA_RS01910 PF00091 Tubulin/FtsZ family, GTPase domain TPCCA_RS01915 PF00589 Phage integrase family TPCCA_RS01915 PF02899 Phage integrase, N-terminal SAM-like domain TPCCA_RS01925 PF17782 DprA winged helix domain TPCCA_RS01925 PF02481 DNA recombination-mediator protein A TPCCA_RS01930 PF01396 Topoisomerase DNA binding C4 zinc finger TPCCA_RS01930 PF01751 Toprim domain TPCCA_RS01930 PF01131 DNA topoisomerase TPCCA_RS01935 PF02899 Phage integrase, N-terminal SAM-like domain TPCCA_RS01935 PF00589 Phage integrase family TPCCA_RS01940 PF00460 Flagella basal body rod protein TPCCA_RS01945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_RS01945 PF00460 Flagella basal body rod protein TPCCA_RS01950 PF02049 Flagellar hook-basal body complex protein FliE TPCCA_RS01955 PF01514 Secretory protein of YscJ/FliF family TPCCA_RS01955 PF08345 Flagellar M-ring protein C-terminal TPCCA_RS01960 PF01706 FliG C-terminal domain TPCCA_RS01960 PF14841 FliG middle domain TPCCA_RS01960 PF14842 FliG N-terminal domain TPCCA_RS01965 PF02108 Flagellar assembly protein FliH TPCCA_RS01970 PF18269 T3SS EscN ATPase C-terminal domain TPCCA_RS01970 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_RS01970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS01990 PF01177 Asp/Glu/Hydantoin racemase TPCCA_RS01995 PF13419 Haloacid dehalogenase-like hydrolase TPCCA_RS02005 PF02699 Preprotein translocase subunit TPCCA_RS02010 PF02355 Protein export membrane protein TPCCA_RS02015 PF02355 Protein export membrane protein TPCCA_RS02025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPCCA_RS02025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPCCA_RS02025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPCCA_RS02025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPCCA_RS02030 PF01235 Sodium:alanine symporter family TPCCA_RS02040 PF00448 SRP54-type protein, GTPase domain TPCCA_RS02040 PF02881 SRP54-type protein, helical bundle domain TPCCA_RS02040 PF02978 Signal peptide binding domain TPCCA_RS02045 PF00795 Carbon-nitrogen hydrolase TPCCA_RS02050 PF08544 GHMP kinases C terminal TPCCA_RS02050 PF10509 Galactokinase galactose-binding signature TPCCA_RS02055 PF01975 Survival protein SurE TPCCA_RS02085 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_RS02085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS02085 PF16886 ATPsynthase alpha/beta subunit N-term extension TPCCA_RS02090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS02090 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_RS02095 PF01813 ATP synthase subunit D TPCCA_RS02110 PF03309 Type III pantothenate kinase TPCCA_RS02125 PF04170 NlpE N-terminal domain TPCCA_RS02130 PF02833 DHHA2 domain TPCCA_RS02130 PF01368 DHH family TPCCA_RS02140 PF01725 Ham1 family TPCCA_RS02145 PF01584 CheW-like domain TPCCA_RS02155 PF01513 ATP-NAD kinase TPCCA_RS02160 PF02463 RecF/RecN/SMC N terminal domain TPCCA_RS02180 PF04551 GcpE protein TPCCA_RS02200 PF03144 Elongation factor Tu domain 2 TPCCA_RS02200 PF00009 Elongation factor Tu GTP binding domain TPCCA_RS02200 PF03764 Elongation factor G, domain IV TPCCA_RS02200 PF14492 Elongation Factor G, domain II TPCCA_RS02200 PF00679 Elongation factor G C-terminus TPCCA_RS02205 PF00133 tRNA synthetases class I (I, L, M and V) TPCCA_RS02205 PF08264 Anticodon-binding domain of tRNA TPCCA_RS02235 PF04079 Segregation and condensation complex subunit ScpB TPCCA_RS02240 PF00849 RNA pseudouridylate synthase TPCCA_RS02240 PF01479 S4 domain TPCCA_RS02260 PF02390 Putative methyltransferase TPCCA_RS02290 PF02151 UvrB/uvrC motif TPCCA_RS02290 PF01541 GIY-YIG catalytic domain TPCCA_RS02290 PF08459 UvrC Helix-hairpin-helix N-terminal TPCCA_RS02300 PF01709 Transcriptional regulator TPCCA_RS02305 PF00342 Phosphoglucose isomerase TPCCA_RS02310 PF00871 Acetokinase family TPCCA_RS02315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TPCCA_RS02320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain TPCCA_RS02320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain TPCCA_RS02345 PF04773 FecR protein TPCCA_RS02350 PF00211 Adenylate and Guanylate cyclase catalytic domain TPCCA_RS02350 PF00072 Response regulator receiver domain TPCCA_RS02365 PF02743 Cache domain TPCCA_RS02365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_RS02365 PF00672 HAMP domain TPCCA_RS02390 PF02618 YceG-like family TPCCA_RS02395 PF01807 CHC2 zinc finger TPCCA_RS02395 PF08275 DNA primase catalytic core, N-terminal domain TPCCA_RS02400 PF04545 Sigma-70, region 4 TPCCA_RS02400 PF04542 Sigma-70 region 2 TPCCA_RS02400 PF00140 Sigma-70 factor, region 1.2 TPCCA_RS02400 PF03979 Sigma-70 factor, region 1.1 TPCCA_RS02400 PF04539 Sigma-70 region 3 TPCCA_RS02430 PF03717 Penicillin-binding Protein dimerisation domain TPCCA_RS02430 PF00905 Penicillin binding protein transpeptidase domain TPCCA_RS02435 PF01098 Cell cycle protein TPCCA_RS02440 PF12796 Ankyrin repeats (3 copies) TPCCA_RS02470 PF05698 Bacterial trigger factor protein (TF) C-terminus TPCCA_RS02470 PF05697 Bacterial trigger factor protein (TF) TPCCA_RS02475 PF00574 Clp protease TPCCA_RS02480 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_RS02480 PF06689 ClpX C4-type zinc finger TPCCA_RS02480 PF07724 AAA domain (Cdc48 subfamily) TPCCA_RS02485 PF00578 AhpC/TSA family TPCCA_RS02490 PF00679 Elongation factor G C-terminus TPCCA_RS02490 PF14492 Elongation Factor G, domain II TPCCA_RS02490 PF00009 Elongation factor Tu GTP binding domain TPCCA_RS02490 PF03144 Elongation factor Tu domain 2 TPCCA_RS02490 PF06421 GTP-binding protein LepA C-terminus TPCCA_RS02500 PF02542 YgbB family TPCCA_RS02500 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TPCCA_RS02510 PF00005 ABC transporter TPCCA_RS02510 PF17760 UvrA interaction domain TPCCA_RS02510 PF17755 UvrA DNA-binding domain TPCCA_RS02520 PF03023 Lipid II flippase MurJ TPCCA_RS02525 PF02075 Crossover junction endodeoxyribonuclease RuvC TPCCA_RS02535 PF02954 Bacterial regulatory protein, Fis family TPCCA_RS02535 PF00072 Response regulator receiver domain TPCCA_RS02535 PF00158 Sigma-54 interaction domain TPCCA_RS02540 PF00989 PAS fold TPCCA_RS02540 PF00512 His Kinase A (phospho-acceptor) domain TPCCA_RS02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_RS02545 PF09115 DNA polymerase III, delta subunit, C terminal TPCCA_RS02550 PF02674 Colicin V production protein TPCCA_RS02555 PF04101 Glycosyltransferase family 28 C-terminal domain TPCCA_RS02555 PF03033 Glycosyltransferase family 28 N-terminal domain TPCCA_RS02560 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_RS02560 PF05362 Lon protease (S16) C-terminal proteolytic domain TPCCA_RS02560 PF02190 ATP-dependent protease La (LON) substrate-binding domain TPCCA_RS02565 PF01132 Elongation factor P (EF-P) OB domain TPCCA_RS02565 PF08207 Elongation factor P (EF-P) KOW-like domain TPCCA_RS02565 PF09285 Elongation factor P, C-terminal TPCCA_RS02575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TPCCA_RS02575 PF04408 Helicase associated domain (HA2) TPCCA_RS02575 PF00270 DEAD/DEAH box helicase TPCCA_RS02575 PF00271 Helicase conserved C-terminal domain TPCCA_RS02580 PF01813 ATP synthase subunit D TPCCA_RS02585 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_RS02585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS02590 PF16886 ATPsynthase alpha/beta subunit N-term extension TPCCA_RS02590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPCCA_RS02590 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPCCA_RS02610 PF01496 V-type ATPase 116kDa subunit family TPCCA_RS02615 PF01992 ATP synthase (C/AC39) subunit TPCCA_RS02625 PF03840 Preprotein translocase SecG subunit TPCCA_RS02630 PF00121 Triosephosphate isomerase TPCCA_RS02635 PF00162 Phosphoglycerate kinase TPCCA_RS02645 PF01740 STAS domain TPCCA_RS02650 PF07650 KH domain TPCCA_RS02650 PF01926 50S ribosome-binding GTPase TPCCA_RS02655 PF00365 Phosphofructokinase TPCCA_RS02660 PF01330 RuvA N terminal domain TPCCA_RS02670 PF13407 Periplasmic binding protein domain TPCCA_RS02675 PF13180 PDZ domain TPCCA_RS02680 PF02401 LytB protein TPCCA_RS02685 PF03687 Uncharacterised protein family (UPF0164) TPCCA_RS02690 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_RS02690 PF02861 Clp amino terminal domain, pathogenicity island component TPCCA_RS02690 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_RS02690 PF17871 AAA lid domain TPCCA_RS02690 PF07724 AAA domain (Cdc48 subfamily) TPCCA_RS02695 PF12631 MnmE helical domain TPCCA_RS02695 PF01926 50S ribosome-binding GTPase TPCCA_RS02695 PF10396 GTP-binding protein TrmE N-terminus TPCCA_RS02715 PF01594 AI-2E family transporter TPCCA_RS02720 PF13419 Haloacid dehalogenase-like hydrolase TPCCA_RS02730 PF03590 Aspartate-ammonia ligase TPCCA_RS02745 PF02568 Thiamine biosynthesis protein (ThiI) TPCCA_RS02745 PF02926 THUMP domain TPCCA_RS02750 PF00456 Transketolase, thiamine diphosphate binding domain TPCCA_RS02750 PF02779 Transketolase, pyrimidine binding domain TPCCA_RS02755 PF04536 TPM domain TPCCA_RS02760 PF08666 SAF domain TPCCA_RS02760 PF03102 NeuB family TPCCA_RS02765 PF00226 DnaJ domain TPCCA_RS02785 PF03062 MBOAT, membrane-bound O-acyltransferase family TPCCA_RS02795 PF01081 KDPG and KHG aldolase TPCCA_RS02800 PF01321 Creatinase/Prolidase N-terminal domain TPCCA_RS02800 PF00557 Metallopeptidase family M24 TPCCA_RS02815 PF01794 Ferric reductase like transmembrane component TPCCA_RS02815 PF04205 FMN-binding domain TPCCA_RS02820 PF14889 Penicillin-binding protein Tp47 domain a TPCCA_RS02820 PF14888 Penicillin-binding protein Tp47 domain C TPCCA_RS02825 PF00391 PEP-utilising enzyme, mobile domain TPCCA_RS02825 PF02896 PEP-utilising enzyme, TIM barrel domain TPCCA_RS02825 PF05524 PEP-utilising enzyme, N-terminal TPCCA_RS02830 PF03462 PCRF domain TPCCA_RS02830 PF00472 RF-1 domain TPCCA_RS02840 PF02881 SRP54-type protein, helical bundle domain TPCCA_RS02840 PF00448 SRP54-type protein, GTPase domain TPCCA_RS02850 PF02687 FtsX-like permease family TPCCA_RS02850 PF12704 MacB-like periplasmic core domain TPCCA_RS02855 PF00005 ABC transporter TPCCA_RS02860 PF12704 MacB-like periplasmic core domain TPCCA_RS02860 PF02687 FtsX-like permease family TPCCA_RS02870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPCCA_RS02875 PF09334 tRNA synthetases class I (M) TPCCA_RS02875 PF13603 Leucyl-tRNA synthetase, Domain 2 TPCCA_RS02875 PF08264 Anticodon-binding domain of tRNA TPCCA_RS02885 PF00381 PTS HPr component phosphorylation site TPCCA_RS02890 PF02603 HPr Serine kinase N terminus TPCCA_RS02890 PF07475 HPr Serine kinase C-terminal domain TPCCA_RS02930 PF05191 Adenylate kinase, active site lid TPCCA_RS02935 PF12627 Probable RNA and SrmB- binding site of polymerase A TPCCA_RS02935 PF01743 Poly A polymerase head domain TPCCA_RS02935 PF12626 Polymerase A arginine-rich C-terminus TPCCA_RS02945 PF14353 CpXC protein TPCCA_RS02950 PF02163 Peptidase family M50 TPCCA_RS02950 PF17820 PDZ domain TPCCA_RS02955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TPCCA_RS02955 PF13288 DXP reductoisomerase C-terminal domain TPCCA_RS02955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TPCCA_RS02965 PF01255 Putative undecaprenyl diphosphate synthase TPCCA_RS02970 PF01765 Ribosome recycling factor TPCCA_RS02975 PF00889 Elongation factor TS TPCCA_RS02980 PF00318 Ribosomal protein S2 TPCCA_RS03000 PF00152 tRNA synthetases class II (D, K and N) TPCCA_RS03000 PF01336 OB-fold nucleic acid binding domain TPCCA_RS03010 PF00005 ABC transporter TPCCA_RS03015 PF01458 Uncharacterized protein family (UPF0051) TPCCA_RS03020 PF01458 Uncharacterized protein family (UPF0051) TPCCA_RS03025 PF00266 Aminotransferase class-V TPCCA_RS03035 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TPCCA_RS03040 PF10895 Domain of unknown function (DUF2715) TPCCA_RS03045 PF10895 Domain of unknown function (DUF2715) TPCCA_RS03060 PF01476 LysM domain TPCCA_RS03060 PF01464 Transglycosylase SLT domain TPCCA_RS03075 PF00149 Calcineurin-like phosphoesterase TPCCA_RS03075 PF12320 Type 5 capsule protein repressor C-terminal domain TPCCA_RS03080 PF13476 AAA domain TPCCA_RS03085 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TPCCA_RS03085 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TPCCA_RS03085 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TPCCA_RS03095 PF03705 CheR methyltransferase, all-alpha domain TPCCA_RS03095 PF01739 CheR methyltransferase, SAM binding domain TPCCA_RS03100 PF00072 Response regulator receiver domain TPCCA_RS03100 PF01339 CheB methylesterase TPCCA_RS03105 PF00579 tRNA synthetases class I (W and Y) TPCCA_RS03110 PF01641 SelR domain TPCCA_RS03110 PF01625 Peptide methionine sulfoxide reductase TPCCA_RS03115 PF00533 BRCA1 C Terminus (BRCT) domain TPCCA_RS03115 PF01653 NAD-dependent DNA ligase adenylation domain TPCCA_RS03115 PF03120 NAD-dependent DNA ligase OB-fold domain TPCCA_RS03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_RS03150 PF17202 Single cache domain 3 TPCCA_RS03150 PF00672 HAMP domain TPCCA_RS03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPCCA_RS03155 PF00672 HAMP domain TPCCA_RS03155 PF05227 CHASE3 domain TPCCA_RS03160 PF13393 Histidyl-tRNA synthetase TPCCA_RS03165 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPCCA_RS03165 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPCCA_RS03165 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPCCA_RS03165 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPCCA_RS03170 PF00929 Exonuclease TPCCA_RS03175 PF01921 tRNA synthetases class I (K) TPCCA_RS03185 PF02403 Seryl-tRNA synthetase N-terminal domain TPCCA_RS03185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_RS03195 PF03471 Transporter associated domain TPCCA_RS03195 PF00571 CBS domain TPCCA_RS03200 PF02130 Uncharacterized protein family UPF0054 TPCCA_RS03205 PF01966 HD domain TPCCA_RS03205 PF07697 7TM-HD extracellular TPCCA_RS03205 PF07698 7TM receptor with intracellular HD hydrolase TPCCA_RS03210 PF08402 TOBE domain TPCCA_RS03210 PF00005 ABC transporter TPCCA_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component TPCCA_RS03225 PF13416 Bacterial extracellular solute-binding protein TPCCA_RS03230 PF02599 Global regulator protein family TPCCA_RS03235 PF02623 FliW protein TPCCA_RS03245 PF07196 Flagellin hook IN motif TPCCA_RS03245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_RS03255 PF01116 Fructose-bisphosphate aldolase class-II TPCCA_RS03280 PF00485 Phosphoribulokinase / Uridine kinase family TPCCA_RS03295 PF07733 Bacterial DNA polymerase III alpha NTPase domain TPCCA_RS03295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TPCCA_RS03295 PF02811 PHP domain TPCCA_RS03295 PF14579 Helix-hairpin-helix motif TPCCA_RS03315 PF03129 Anticodon binding domain TPCCA_RS03320 PF00749 tRNA synthetases class I (E and Q), catalytic domain TPCCA_RS03325 PF01713 Smr domain TPCCA_RS03330 PF01963 TraB family TPCCA_RS03360 PF00814 Glycoprotease family TPCCA_RS03365 PF00842 Alanine racemase, C-terminal domain TPCCA_RS03365 PF01168 Alanine racemase, N-terminal domain TPCCA_RS03370 PF01728 FtsJ-like methyltransferase TPCCA_RS03375 PF00348 Polyprenyl synthetase TPCCA_RS03380 PF18610 Periplasmic binding protein domain TPCCA_RS03380 PF13407 Periplasmic binding protein domain TPCCA_RS03385 PF00005 ABC transporter TPCCA_RS03390 PF02653 Branched-chain amino acid transport system / permease component TPCCA_RS03395 PF00271 Helicase conserved C-terminal domain TPCCA_RS03395 PF00270 DEAD/DEAH box helicase TPCCA_RS03395 PF17191 RecG wedge domain TPCCA_RS03400 PF02016 LD-carboxypeptidase N-terminal domain TPCCA_RS03400 PF17676 LD-carboxypeptidase C-terminal domain TPCCA_RS03405 PF01926 50S ribosome-binding GTPase TPCCA_RS03405 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TPCCA_RS03415 PF02616 Segregation and condensation protein ScpA TPCCA_RS03420 PF00154 recA bacterial DNA recombination protein TPCCA_RS03440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPCCA_RS03440 PF02844 Phosphoribosylglycinamide synthetase, N domain TPCCA_RS03440 PF02843 Phosphoribosylglycinamide synthetase, C domain TPCCA_RS03465 PF01192 RNA polymerase Rpb6 TPCCA_RS03480 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TPCCA_RS03480 PF02272 DHHA1 domain TPCCA_RS03480 PF01368 DHH family TPCCA_RS03480 PF17768 RecJ OB domain TPCCA_RS03485 PF17092 Penicillin-binding protein OB-like domain TPCCA_RS03485 PF00912 Transglycosylase TPCCA_RS03485 PF00905 Penicillin binding protein transpeptidase domain TPCCA_RS03490 PF01551 Peptidase family M23 TPCCA_RS03490 PF10145 Phage-related minor tail protein TPCCA_RS03490 PF01464 Transglycosylase SLT domain TPCCA_RS03505 PF04545 Sigma-70, region 4 TPCCA_RS03505 PF04539 Sigma-70 region 3 TPCCA_RS03505 PF04542 Sigma-70 region 2 TPCCA_RS03520 PF10609 NUBPL iron-transfer P-loop NTPase TPCCA_RS03525 PF00448 SRP54-type protein, GTPase domain TPCCA_RS03530 PF00771 FHIPEP family TPCCA_RS03535 PF01312 FlhB HrpN YscU SpaS Family TPCCA_RS03540 PF01311 Bacterial export proteins, family 1 TPCCA_RS03545 PF01313 Bacterial export proteins, family 3 TPCCA_RS03550 PF00813 FliP family TPCCA_RS03560 PF04509 CheC-like family TPCCA_RS03560 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPCCA_RS03565 PF02154 Flagellar motor switch protein FliM TPCCA_RS03565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPCCA_RS03570 PF03748 Flagellar basal body-associated protein FliL TPCCA_RS03575 PF13677 Membrane MotB of proton-channel complex MotA/MotB TPCCA_RS03575 PF00691 OmpA family TPCCA_RS03580 PF01618 MotA/TolQ/ExbB proton channel family TPCCA_RS03590 PF07559 Flagellar basal body protein FlaE TPCCA_RS03590 PF00460 Flagella basal body rod protein TPCCA_RS03590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_RS03595 PF03963 Flagellar hook capping protein - N-terminal region TPCCA_RS03615 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPCCA_RS03615 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPCCA_RS03620 PF13505 Outer membrane protein beta-barrel domain TPCCA_RS03625 PF01048 Phosphorylase superfamily TPCCA_RS03630 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_RS03630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPCCA_RS03635 PF00175 Oxidoreductase NAD-binding domain TPCCA_RS03635 PF00970 Oxidoreductase FAD-binding domain TPCCA_RS03635 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPCCA_RS03660 PF01467 Cytidylyltransferase-like TPCCA_RS03665 PF01018 GTP1/OBG TPCCA_RS03665 PF01926 50S ribosome-binding GTPase TPCCA_RS03670 PF01016 Ribosomal L27 protein TPCCA_RS03680 PF00829 Ribosomal prokaryotic L21 protein TPCCA_RS03685 PF02896 PEP-utilising enzyme, TIM barrel domain TPCCA_RS03685 PF00391 PEP-utilising enzyme, mobile domain TPCCA_RS03700 PF13519 von Willebrand factor type A domain TPCCA_RS03705 PF18663 Pallilysin beta barrel domain TPCCA_RS03720 PF01938 TRAM domain TPCCA_RS03720 PF04055 Radical SAM superfamily TPCCA_RS03720 PF00919 Uncharacterized protein family UPF0004 TPCCA_RS03725 PF00381 PTS HPr component phosphorylation site TPCCA_RS03725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPCCA_RS03725 PF02896 PEP-utilising enzyme, TIM barrel domain TPCCA_RS03725 PF05524 PEP-utilising enzyme, N-terminal TPCCA_RS03725 PF00391 PEP-utilising enzyme, mobile domain TPCCA_RS03730 PF00551 Formyl transferase TPCCA_RS03730 PF02911 Formyl transferase, C-terminal domain TPCCA_RS03735 PF01327 Polypeptide deformylase TPCCA_RS03740 PF01165 Ribosomal protein S21 TPCCA_RS03745 PF03793 PASTA domain TPCCA_RS03745 PF03717 Penicillin-binding Protein dimerisation domain TPCCA_RS03745 PF00905 Penicillin binding protein transpeptidase domain TPCCA_RS03770 PF01434 Peptidase family M41 TPCCA_RS03770 PF17862 AAA+ lid domain TPCCA_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_RS03780 PF03764 Elongation factor G, domain IV TPCCA_RS03780 PF00009 Elongation factor Tu GTP binding domain TPCCA_RS03780 PF14492 Elongation Factor G, domain II TPCCA_RS03780 PF03144 Elongation factor Tu domain 2 TPCCA_RS03780 PF00679 Elongation factor G C-terminus TPCCA_RS03800 PF02690 Na+/Pi-cotransporter TPCCA_RS03825 PF02308 MgtC family TPCCA_RS03830 PF00730 HhH-GPD superfamily base excision DNA repair protein TPCCA_RS03845 PF03819 MazG nucleotide pyrophosphohydrolase domain TPCCA_RS03850 PF09335 SNARE associated Golgi protein TPCCA_RS03855 PF02540 NAD synthase TPCCA_RS03880 PF00005 ABC transporter TPCCA_RS03880 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPCCA_RS03895 PF17131 Outer membrane lipoprotein-sorting protein TPCCA_RS03910 PF00700 Bacterial flagellin C-terminal helical region TPCCA_RS03910 PF00669 Bacterial flagellin N-terminal helical region TPCCA_RS03920 PF02772 S-adenosylmethionine synthetase, central domain TPCCA_RS03920 PF00438 S-adenosylmethionine synthetase, N-terminal domain TPCCA_RS03920 PF02773 S-adenosylmethionine synthetase, C-terminal domain TPCCA_RS03925 PF02424 ApbE family TPCCA_RS03930 PF03807 NADP oxidoreductase coenzyme F420-dependent TPCCA_RS03930 PF14748 Pyrroline-5-carboxylate reductase dimerisation TPCCA_RS03935 PF01588 Putative tRNA binding domain TPCCA_RS03935 PF09334 tRNA synthetases class I (M) TPCCA_RS03945 PF07943 Penicillin-binding protein 5, C-terminal domain TPCCA_RS03945 PF00768 D-alanyl-D-alanine carboxypeptidase TPCCA_RS03950 PF00004 ATPase family associated with various cellular activities (AAA) TPCCA_RS03950 PF07724 AAA domain (Cdc48 subfamily) TPCCA_RS03950 PF17871 AAA lid domain TPCCA_RS03950 PF02861 Clp amino terminal domain, pathogenicity island component TPCCA_RS03950 PF10431 C-terminal, D2-small domain, of ClpB protein TPCCA_RS03960 PF00005 ABC transporter TPCCA_RS03960 PF17912 MalK OB fold domain TPCCA_RS03960 PF03459 TOBE domain TPCCA_RS03965 PF00773 RNB domain TPCCA_RS03975 PF01783 Ribosomal L32p protein family TPCCA_RS03980 PF00550 Phosphopantetheine attachment site TPCCA_RS03985 PF00035 Double-stranded RNA binding motif TPCCA_RS03985 PF14622 Ribonuclease-III-like TPCCA_RS03990 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPCCA_RS04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_RS04025 PF03952 Enolase, N-terminal domain TPCCA_RS04025 PF00113 Enolase, C-terminal TIM barrel domain TPCCA_RS04030 PF00753 Metallo-beta-lactamase superfamily TPCCA_RS04030 PF12706 Beta-lactamase superfamily domain TPCCA_RS04040 PF03180 NLPA lipoprotein TPCCA_RS04045 PF00924 Mechanosensitive ion channel TPCCA_RS04045 PF05552 Conserved TM helix TPCCA_RS04050 PF01880 Desulfoferrodoxin TPCCA_RS04055 PF02779 Transketolase, pyrimidine binding domain TPCCA_RS04055 PF02780 Transketolase, C-terminal domain TPCCA_RS04055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TPCCA_RS04060 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPCCA_RS04070 PF01648 4'-phosphopantetheinyl transferase superfamily TPCCA_RS04075 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) TPCCA_RS04080 PF01416 tRNA pseudouridine synthase TPCCA_RS04085 PF03485 Arginyl tRNA synthetase N terminal domain TPCCA_RS04085 PF05746 DALR anticodon binding domain TPCCA_RS04085 PF00750 tRNA synthetases class I (R) TPCCA_RS04100 PF00579 tRNA synthetases class I (W and Y) TPCCA_RS04115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPCCA_RS04115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPCCA_RS04115 PF03129 Anticodon binding domain TPCCA_RS04120 PF00005 ABC transporter TPCCA_RS04120 PF12848 ABC transporter TPCCA_RS04125 PF13349 Putative adhesin TPCCA_RS04135 PF00595 PDZ domain TPCCA_RS04140 PF00557 Metallopeptidase family M24 TPCCA_RS04145 PF01556 DnaJ C terminal domain TPCCA_RS04145 PF00684 DnaJ central domain TPCCA_RS04145 PF00226 DnaJ domain TPCCA_RS04150 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPCCA_RS04150 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TPCCA_RS04155 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TPCCA_RS04160 PF05164 Cell division protein ZapA TPCCA_RS04170 PF00453 Ribosomal protein L20 TPCCA_RS04175 PF01632 Ribosomal protein L35 TPCCA_RS04180 PF05198 Translation initiation factor IF-3, N-terminal domain TPCCA_RS04180 PF00707 Translation initiation factor IF-3, C-terminal domain TPCCA_RS04185 PF16314 Domain of unknown function (DUF4954) TPCCA_RS04190 PF01790 Prolipoprotein diacylglyceryl transferase TPCCA_RS04195 PF10609 NUBPL iron-transfer P-loop NTPase TPCCA_RS04210 PF03687 Uncharacterised protein family (UPF0164) TPCCA_RS04215 PF03687 Uncharacterised protein family (UPF0164) TPCCA_RS04225 PF01380 SIS domain TPCCA_RS04230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPCCA_RS04230 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TPCCA_RS04235 PF00266 Aminotransferase class-V TPCCA_RS04240 PF05257 CHAP domain TPCCA_RS04240 PF01476 LysM domain TPCCA_RS04245 PF03687 Uncharacterised protein family (UPF0164) TPCCA_RS04250 PF01078 Magnesium chelatase, subunit ChlI TPCCA_RS04250 PF13335 Magnesium chelatase, subunit ChlI C-terminal TPCCA_RS04260 PF00669 Bacterial flagellin N-terminal helical region TPCCA_RS04260 PF00700 Bacterial flagellin C-terminal helical region TPCCA_RS04270 PF00669 Bacterial flagellin N-terminal helical region TPCCA_RS04270 PF00700 Bacterial flagellin C-terminal helical region TPCCA_RS04275 PF07195 Flagellar hook-associated protein 2 C-terminus TPCCA_RS04275 PF02465 Flagellar hook-associated protein 2 N-terminus TPCCA_RS04290 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TPCCA_RS04295 PF00814 Glycoprotease family TPCCA_RS04300 PF00672 HAMP domain TPCCA_RS04300 PF01966 HD domain TPCCA_RS04305 PF14238 Domain of unknown function (DUF4340) TPCCA_RS04320 PF00005 ABC transporter TPCCA_RS04340 PF00692 dUTPase TPCCA_RS04345 PF00013 KH domain TPCCA_RS04345 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TPCCA_RS04345 PF01138 3' exoribonuclease family, domain 1 TPCCA_RS04345 PF03725 3' exoribonuclease family, domain 2 TPCCA_RS04345 PF00575 S1 RNA binding domain TPCCA_RS04350 PF00312 Ribosomal protein S15 TPCCA_RS04360 PF01509 TruB family pseudouridylate synthase (N terminal domain) TPCCA_RS04360 PF16198 tRNA pseudouridylate synthase B C-terminal domain TPCCA_RS04365 PF02033 Ribosome-binding factor A TPCCA_RS04370 PF11987 Translation-initiation factor 2 TPCCA_RS04370 PF00009 Elongation factor Tu GTP binding domain TPCCA_RS04370 PF04760 Translation initiation factor IF-2, N-terminal region TPCCA_RS04375 PF13184 NusA-like KH domain TPCCA_RS04375 PF00575 S1 RNA binding domain TPCCA_RS04375 PF08529 NusA N-terminal domain TPCCA_RS04380 PF02576 RimP N-terminal domain TPCCA_RS04380 PF17384 RimP C-terminal SH3 domain TPCCA_RS04400 PF13361 UvrD-like helicase C-terminal domain TPCCA_RS04400 PF00580 UvrD/REP helicase N-terminal domain TPCCA_RS04400 PF12705 PD-(D/E)XK nuclease superfamily TPCCA_RS04405 PF12705 PD-(D/E)XK nuclease superfamily TPCCA_RS04410 PF01554 MatE TPCCA_RS04420 PF02875 Mur ligase family, glutamate ligase domain TPCCA_RS04420 PF08245 Mur ligase middle domain TPCCA_RS04425 PF00886 Ribosomal protein S16 TPCCA_RS04435 PF01782 RimM N-terminal domain TPCCA_RS04440 PF01746 tRNA (Guanine-1)-methyltransferase TPCCA_RS04445 PF01245 Ribosomal protein L19 TPCCA_RS04455 PF01312 FlhB HrpN YscU SpaS Family TPCCA_RS04460 PF01966 HD domain TPCCA_RS04460 PF11871 Domain of unknown function (DUF3391) TPCCA_RS04465 PF02021 Uncharacterised protein family UPF0102 TPCCA_RS04485 PF01769 Divalent cation transporter TPCCA_RS04485 PF03448 MgtE intracellular N domain TPCCA_RS04485 PF00571 CBS domain TPCCA_RS04495 PF00085 Thioredoxin TPCCA_RS04505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPCCA_RS04505 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPCCA_RS04525 PF16921 Tex protein YqgF-like domain TPCCA_RS04525 PF17674 HHH domain TPCCA_RS04525 PF00575 S1 RNA binding domain TPCCA_RS04525 PF09371 Tex-like protein N-terminal domain TPCCA_RS04535 PF00258 Flavodoxin TPCCA_RS04540 PF10502 Signal peptidase, peptidase S26 TPCCA_RS04555 PF01973 Protein of unknown function DUF115 TPCCA_RS04560 PF01204 Trehalase TPCCA_RS04565 PF08245 Mur ligase middle domain TPCCA_RS04565 PF02875 Mur ligase family, glutamate ligase domain TPCCA_RS04565 PF01225 Mur ligase family, catalytic domain TPCCA_RS04575 PF07859 alpha/beta hydrolase fold TPCCA_RS04600 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPCCA_RS04600 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TPCCA_RS04600 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TPCCA_RS04600 PF10371 Domain of unknown function TPCCA_RS04600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPCCA_RS04625 PF00834 Ribulose-phosphate 3 epimerase family TPCCA_RS04630 PF02527 rRNA small subunit methyltransferase G TPCCA_RS04635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPCCA_RS04640 PF01424 R3H domain TPCCA_RS04640 PF14804 Jag N-terminus TPCCA_RS04645 PF02096 60Kd inner membrane protein TPCCA_RS04645 PF14849 YidC periplasmic domain TPCCA_RS04650 PF01809 Putative membrane protein insertion efficiency factor TPCCA_RS04655 PF00825 Ribonuclease P TPCCA_RS04685 PF16811 TRAP transporter T-component TPCCA_RS04695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TPCCA_RS04695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component TPCCA_RS04700 PF10135 Rod binding protein TPCCA_RS04705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_RS04705 PF00460 Flagella basal body rod protein TPCCA_RS04710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPCCA_RS04710 PF00460 Flagella basal body rod protein TPCCA_RS04715 PF00005 ABC transporter TPCCA_RS04715 PF12704 MacB-like periplasmic core domain TPCCA_RS04715 PF02687 FtsX-like permease family TPCCA_RS04720 PF12704 MacB-like periplasmic core domain TPCCA_RS04720 PF02687 FtsX-like permease family TPCCA_RS04720 PF00005 ABC transporter TPCCA_RS04725 PF00005 ABC transporter TPCCA_RS04730 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TPCCA_RS04755 PF10634 Fe2+ transport protein TPCCA_RS04760 PF03239 Iron permease FTR1 family TPCCA_RS04765 PF01409 tRNA synthetases class II core domain (F) TPCCA_RS04775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPCCA_RS04785 PF01784 NIF3 (NGG1p interacting factor 3) TPCCA_RS04790 PF01252 Signal peptidase (SPase) II TPCCA_RS04795 PF01026 TatD related DNase TPCCA_RS04800 PF01207 Dihydrouridine synthase (Dus) TPCCA_RS04805 PF00990 Diguanylate cyclase, GGDEF domain TPCCA_RS04805 PF00072 Response regulator receiver domain TPCCA_RS04820 PF00183 Hsp90 protein TPCCA_RS04825 PF01336 OB-fold nucleic acid binding domain TPCCA_RS04825 PF02938 GAD domain TPCCA_RS04825 PF00152 tRNA synthetases class II (D, K and N) TPCCA_RS04840 PF01914 MarC family integral membrane protein TPCCA_RS04860 PF03330 Lytic transglycolase TPCCA_RS04870 PF01026 TatD related DNase TPCCA_RS04890 PF01343 Peptidase family S49 TPCCA_RS04895 PF01235 Sodium:alanine symporter family TPCCA_RS04900 PF17854 FtsK alpha domain TPCCA_RS04900 PF09397 Ftsk gamma domain TPCCA_RS04900 PF01580 FtsK/SpoIIIE family TPCCA_RS04925 PF13662 Toprim domain TPCCA_RS04930 PF12169 DNA polymerase III subunits gamma and tau domain III TPCCA_RS04935 PF00986 DNA gyrase B subunit, carboxyl terminus TPCCA_RS04935 PF01751 Toprim domain TPCCA_RS04935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPCCA_RS04935 PF00204 DNA gyrase B TPCCA_RS04940 PF02511 Thymidylate synthase complementing protein TPCCA_RS04945 PF03477 ATP cone domain TPCCA_RS04945 PF02867 Ribonucleotide reductase, barrel domain TPCCA_RS04945 PF00317 Ribonucleotide reductase, all-alpha domain TPCCA_RS04950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TPCCA_RS04950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPCCA_RS04955 PF00334 Nucleoside diphosphate kinase TPCCA_RS04960 PF01195 Peptidyl-tRNA hydrolase TPCCA_RS04965 PF04542 Sigma-70 region 2 TPCCA_RS04965 PF04539 Sigma-70 region 3 TPCCA_RS04965 PF04545 Sigma-70, region 4 TPCCA_RS04965 PF00140 Sigma-70 factor, region 1.2 TPCCA_RS04965 PF03979 Sigma-70 factor, region 1.1 TPCCA_RS04970 PF00166 Chaperonin 10 Kd subunit TPCCA_RS04980 PF01029 NusB family TPCCA_RS04985 PF13145 PPIC-type PPIASE domain TPCCA_RS04990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPCCA_RS04990 PF01411 tRNA synthetases class II (A) TPCCA_RS04995 PF12072 Domain of unknown function (DUF3552) TPCCA_RS04995 PF00013 KH domain TPCCA_RS04995 PF01966 HD domain TPCCA_RS05005 PF01425 Amidase TPCCA_RS05010 PF02934 GatB/GatE catalytic domain TPCCA_RS05010 PF02637 GatB domain TPCCA_RS05015 PF06745 KaiC TPCCA_RS05015 PF18073 Rubredoxin metal binding domain TPCCA_RS05020 PF02631 RecX family TPCCA_RS05025 PF00380 Ribosomal protein S9/S16 TPCCA_RS05030 PF00572 Ribosomal protein L13 TPCCA_RS05050 PF01048 Phosphorylase superfamily TPCCA_RS05055 PF13361 UvrD-like helicase C-terminal domain TPCCA_RS05055 PF00580 UvrD/REP helicase N-terminal domain TPCCA_RS05060 PF03880 DbpA RNA binding domain TPCCA_RS05070 PF07009 NusG domain II TPCCA_RS05075 PF01734 Patatin-like phospholipase TPCCA_RS05080 PF01699 Sodium/calcium exchanger protein TPCCA_RS05085 PF10458 Valyl tRNA synthetase tRNA binding arm TPCCA_RS05085 PF00133 tRNA synthetases class I (I, L, M and V) TPCCA_RS05085 PF08264 Anticodon-binding domain of tRNA TPCCA_RS05090 PF00403 Heavy-metal-associated domain TPCCA_RS05095 PF03006 Haemolysin-III related TPCCA_RS05100 PF00210 Ferritin-like domain TPCCA_RS05105 PF00156 Phosphoribosyl transferase domain TPCCA_RS05110 PF00152 tRNA synthetases class II (D, K and N) TPCCA_RS05115 PF00574 Clp protease TPCCA_RS05145 PF08308 PEGA domain