locus-tag	class	description
TPCCA_RS00020	COG0592	DNA-directed DNA polymerase activity
TPCCA_RS00025	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
TPCCA_RS00030	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
TPCCA_RS00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
TPCCA_RS00045	COG1609	Transcriptional regulator
TPCCA_RS00060	COG1609	Transcriptional regulator
TPCCA_RS00070	COG1067	ATP-dependent peptidase activity
TPCCA_RS00080	COG1747	RNA polymerase binding
TPCCA_RS00080	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
TPCCA_RS00120	COG0733	neurotransmitter:sodium symporter activity
TPCCA_RS00135	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TPCCA_RS00145	COG1253	flavin adenine dinucleotide binding
TPCCA_RS00150	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
TPCCA_RS00160	COG1385	rRNA (uridine-N3-)-methyltransferase activity
TPCCA_RS00170	COG0803	Belongs to the bacterial solute-binding protein 9 family
TPCCA_RS00175	COG1121	(ABC) transporter
TPCCA_RS00180	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TPCCA_RS00185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
TPCCA_RS00205	COG1652	LysM domain
TPCCA_RS00225	COG1774	PSP1 C-terminal conserved region
TPCCA_RS00240	COG0739	heme binding
TPCCA_RS00255	COG2890	protein-(glutamine-N5) methyltransferase activity
TPCCA_RS00260	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TPCCA_RS00270	COG3630	sodium ion export across plasma membrane
TPCCA_RS00280	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
TPCCA_RS00285	COG0305	Participates in initiation and elongation during chromosome replication
TPCCA_RS00300	COG0629	single-stranded DNA binding
TPCCA_RS00345	COG0542	response to heat
TPCCA_RS00355	COG1639	'signal transduction protein
TPCCA_RS00365	COG1175	transmembrane transport
TPCCA_RS00370	COG0395	ABC-type sugar transport system, permease component
TPCCA_RS00380	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
TPCCA_RS00395	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
TPCCA_RS00400	COG3604	Transcriptional regulator
TPCCA_RS00415	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TPCCA_RS00415	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
TPCCA_RS00415	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
TPCCA_RS00435	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TPCCA_RS00440	COG0812	UDP-N-acetylmuramate dehydrogenase activity
TPCCA_RS00460	COG0280	phosphate acetyltransferase
TPCCA_RS00465	COG0457	Tetratricopeptide repeat
TPCCA_RS00475	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
TPCCA_RS00480	COG0484	heat shock protein binding
TPCCA_RS00490	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
TPCCA_RS00495	COG0785	Cytochrome C biogenesis protein
TPCCA_RS00510	COG0737	Belongs to the 5'-nucleotidase family
TPCCA_RS00515	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TPCCA_RS00515	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TPCCA_RS00515	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
TPCCA_RS00525	COG4750	Nucleotidyl transferase
TPCCA_RS00530	COG0205	6-phosphofructokinase activity
TPCCA_RS00560	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
TPCCA_RS00565	COG3579	cysteine-type endopeptidase activity
TPCCA_RS00570	COG0330	HflC and HflK could
TPCCA_RS00575	COG0330	HflC and HflK could
TPCCA_RS00580	COG0351	phosphomethylpyrimidine kinase
TPCCA_RS00600	COG2011	ABC-type metal ion transport system permease component
TPCCA_RS00605	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
TPCCA_RS00610	COG1509	lysine 2,3-aminomutase activity
TPCCA_RS00625	COG0457	Tetratricopeptide repeat
TPCCA_RS00630	COG0012	GTP binding
TPCCA_RS00635	COG0708	Exodeoxyribonuclease III
TPCCA_RS00700	COG0569	domain protein
TPCCA_RS00705	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
TPCCA_RS00710	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
TPCCA_RS00730	COG1022	Amp-dependent synthetase and ligase
TPCCA_RS00755	COG1449	Belongs to the glycosyl hydrolase 57 family
TPCCA_RS00785	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
TPCCA_RS00825	COG2255	four-way junction helicase activity
TPCCA_RS00830	COG0803	Belongs to the bacterial solute-binding protein 9 family
TPCCA_RS00835	COG1121	(ABC) transporter
TPCCA_RS00840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TPCCA_RS00845	COG1108	ABC-type Mn2 Zn2 transport systems permease components
TPCCA_RS00865	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
TPCCA_RS00870	COG4939	FMN-binding domain protein
TPCCA_RS00875	COG2199	diguanylate cyclase activity
TPCCA_RS00900	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
TPCCA_RS00925	COG0635	Involved in the biosynthesis of porphyrin-containing compound
TPCCA_RS00930	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
TPCCA_RS01050	COG0202	RNA polymerase activity
TPCCA_RS01065	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
TPCCA_RS01075	COG0484	heat shock protein binding
TPCCA_RS01140	COG1122	ATPase activity
TPCCA_RS01145	COG1268	BioY protein
TPCCA_RS01150	COG1573	uracil-dna glycosylase
TPCCA_RS01155	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
TPCCA_RS01160	COG0564	pseudouridine synthase activity
TPCCA_RS01185	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
TPCCA_RS01190	COG0250	Participates in transcription elongation, termination and antitermination
TPCCA_RS01215	COG0085	RNA polymerase activity
TPCCA_RS01235	COG0714	Associated with various cellular activities
TPCCA_RS01240	COG2304	oxidoreductase activity
TPCCA_RS01245	COG0860	N-Acetylmuramoyl-L-alanine amidase
TPCCA_RS01260	COG0776	regulation of translation
TPCCA_RS01265	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TPCCA_RS01275	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
TPCCA_RS01285	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
TPCCA_RS01290	COG0584	glycerophosphoryl diester phosphodiesterase
TPCCA_RS01315	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
TPCCA_RS01330	COG1114	Component of the transport system for branched-chain amino acids
TPCCA_RS01365	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
TPCCA_RS01370	COG0617	tRNA 3'-terminal CCA addition
TPCCA_RS01375	COG1475	DNA binding
TPCCA_RS01380	COG1192	Involved in chromosome partitioning
TPCCA_RS01405	COG0793	Belongs to the peptidase S41A family
TPCCA_RS01415	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
TPCCA_RS01425	COG0731	radical SAM domain protein
TPCCA_RS01435	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
TPCCA_RS01440	COG0561	phosphatase activity
TPCCA_RS01450	COG2885	chlorophyll binding
TPCCA_RS01455	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
TPCCA_RS01465	COG0237	dephospho-CoA kinase activity
TPCCA_RS01475	COG1744	ABC transporter substrate-binding protein PnrA-like
TPCCA_RS01480	COG3845	ABC transporter
TPCCA_RS01485	COG4603	Belongs to the binding-protein-dependent transport system permease family
TPCCA_RS01490	COG1079	Belongs to the binding-protein-dependent transport system permease family
TPCCA_RS01495	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
TPCCA_RS01500	COG0823	Involved in the tonB-independent uptake of proteins
TPCCA_RS01560	COG1744	ABC transporter substrate-binding protein PnrA-like
TPCCA_RS01565	COG3845	ABC transporter
TPCCA_RS01570	COG4603	Belongs to the binding-protein-dependent transport system permease family
TPCCA_RS01575	COG1079	Belongs to the binding-protein-dependent transport system permease family
TPCCA_RS01580	COG2911	Protein conserved in bacteria
TPCCA_RS01585	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TPCCA_RS01625	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
TPCCA_RS01665	COG0285	dihydrofolate synthase activity
TPCCA_RS01675	COG1102	Psort location Cytoplasmic, score
TPCCA_RS01710	COG1047	Peptidyl-prolyl cis-trans
TPCCA_RS01725	COG4443	Transcriptional Coactivator p15 (PC4)
TPCCA_RS01735	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
TPCCA_RS01755	COG1543	Belongs to the glycosyl hydrolase 57 family
TPCCA_RS01775	COG0643	Histidine kinase
TPCCA_RS01775	COG2198	Histidine kinase
TPCCA_RS01780	COG0835	chemotaxis
TPCCA_RS01790	COG2201	protein-glutamate methylesterase activity
TPCCA_RS01800	COG1196	nuclear chromosome segregation
TPCCA_RS01810	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
TPCCA_RS01840	COG0457	Tetratricopeptide repeat
TPCCA_RS01860	COG0653	protein targeting
TPCCA_RS01870	COG5522	Integral membrane protein (intg_mem_TP0381)
TPCCA_RS01890	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
TPCCA_RS01900	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
TPCCA_RS01910	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
TPCCA_RS01915	COG4974	Belongs to the 'phage' integrase family
TPCCA_RS01925	COG0758	DNA mediated transformation
TPCCA_RS01930	COG0551	DNA topoisomerase type I activity
TPCCA_RS01930	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
TPCCA_RS01935	COG4974	Belongs to the 'phage' integrase family
TPCCA_RS01940	COG1815	bacterial-type flagellum-dependent cell motility
TPCCA_RS01955	COG1766	The M ring may be actively involved in energy transduction
TPCCA_RS01965	COG1317	bacterial-type flagellum organization
TPCCA_RS01970	COG1157	protein secretion by the type III secretion system
TPCCA_RS01980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
TPCCA_RS02005	COG1862	Preprotein translocase
TPCCA_RS02010	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TPCCA_RS02015	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
TPCCA_RS02030	COG1115	amino acid carrier protein
TPCCA_RS02040	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
TPCCA_RS02045	COG0815	Transfers the fatty acyl group on membrane lipoproteins
TPCCA_RS02050	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
TPCCA_RS02055	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
TPCCA_RS02085	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
TPCCA_RS02090	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
TPCCA_RS02095	COG1394	ATPase activity, coupled to movement of substances
TPCCA_RS02100	COG1269	ATP hydrolysis coupled proton transport
TPCCA_RS02110	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
TPCCA_RS02125	COG3015	lipoprotein NlpE involved in copper resistance
TPCCA_RS02130	COG1227	inorganic diphosphatase activity
TPCCA_RS02145	COG0835	chemotaxis
TPCCA_RS02160	COG0497	DNA recombination
TPCCA_RS02180	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
TPCCA_RS02185	COG3118	belongs to the thioredoxin family
TPCCA_RS02190	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
TPCCA_RS02195	COG0457	Tetratricopeptide repeat
TPCCA_RS02200	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TPCCA_RS02215	COG3706	GGDEF domain
TPCCA_RS02235	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
TPCCA_RS02315	COG0363	glucosamine-6-phosphate deaminase activity
TPCCA_RS02320	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
TPCCA_RS02330	COG3216	Uncharacterized protein conserved in bacteria (DUF2062)
TPCCA_RS02335	COG2982	Protein involved in outer membrane biogenesis
TPCCA_RS02345	COG4254	PFAM FecR protein
TPCCA_RS02390	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
TPCCA_RS02395	COG0358	DNA primase activity
TPCCA_RS02400	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TPCCA_RS02415	COG1077	Cell shape determining protein MreB Mrl
TPCCA_RS02430	COG0768	penicillin binding
TPCCA_RS02435	COG0772	Belongs to the SEDS family
TPCCA_RS02440	COG0666	response to abiotic stimulus
TPCCA_RS02475	COG0740	serine-type endopeptidase activity
TPCCA_RS02485	COG0450	alkyl hydroperoxide reductase
TPCCA_RS02500	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
TPCCA_RS02500	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
TPCCA_RS02510	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
TPCCA_RS02520	COG0728	peptidoglycan biosynthetic process
TPCCA_RS02535	COG2204	response regulator
TPCCA_RS02540	COG3852	Histidine kinase
TPCCA_RS02545	COG0470	DNA polymerase III
TPCCA_RS02550	COG1286	toxin biosynthetic process
TPCCA_RS02560	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
TPCCA_RS02580	COG1394	ATPase activity, coupled to movement of substances
TPCCA_RS02585	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
TPCCA_RS02590	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
TPCCA_RS02610	COG1269	ATP hydrolysis coupled proton transport
TPCCA_RS02615	COG1527	subunit (C
TPCCA_RS02625	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
TPCCA_RS02645	COG1366	Belongs to the anti-sigma-factor antagonist family
TPCCA_RS02655	COG0205	6-phosphofructokinase activity
TPCCA_RS02675	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TPCCA_RS02715	COG0628	permease
TPCCA_RS02720	COG0546	phosphoglycolate phosphatase activity
TPCCA_RS02750	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
TPCCA_RS02755	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
TPCCA_RS02760	COG2089	acid synthase
TPCCA_RS02795	COG0800	Aldolase
TPCCA_RS02800	COG0006	proline dipeptidase activity
TPCCA_RS02815	COG3976	FMN-binding domain protein
TPCCA_RS02815	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
TPCCA_RS02825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TPCCA_RS02830	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
TPCCA_RS02840	COG0552	protein localization to endoplasmic reticulum
TPCCA_RS02850	COG4591	ABC-type transport system involved in lipoprotein release permease component
TPCCA_RS02855	COG1136	(ABC) transporter
TPCCA_RS02870	COG4166	transmembrane transport
TPCCA_RS02880	COG1466	dna polymerase III delta subunit
TPCCA_RS02885	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
TPCCA_RS02890	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
TPCCA_RS02920	COG3064	Membrane
TPCCA_RS02935	COG0617	tRNA 3'-terminal CCA addition
TPCCA_RS02950	COG0750	zinc metalloprotease
TPCCA_RS02955	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
TPCCA_RS02960	COG0575	Belongs to the CDS family
TPCCA_RS02965	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
TPCCA_RS02990	COG1413	lyase activity
TPCCA_RS03015	COG0719	Fe-S assembly protein
TPCCA_RS03020	COG0719	Fe-S assembly protein
TPCCA_RS03025	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
TPCCA_RS03060	COG1388	LysM domain
TPCCA_RS03060	COG0741	lytic transglycosylase activity
TPCCA_RS03075	COG0420	3'-5' exonuclease activity
TPCCA_RS03080	COG0419	ATPase involved in DNA repair
TPCCA_RS03085	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
TPCCA_RS03100	COG2201	protein-glutamate methylesterase activity
TPCCA_RS03105	COG0180	Tryptophanyl-tRNA synthetase
TPCCA_RS03110	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TPCCA_RS03110	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
TPCCA_RS03150	COG0840	transmembrane signaling receptor activity
TPCCA_RS03150	COG3290	protein histidine kinase activity
TPCCA_RS03155	COG0840	transmembrane signaling receptor activity
TPCCA_RS03155	COG5278	phosphoserine phosphatase activity
TPCCA_RS03165	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
TPCCA_RS03170	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
TPCCA_RS03175	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
TPCCA_RS03205	COG1480	7TM receptor with intracellular HD hydrolase
TPCCA_RS03210	COG3842	ATPase activity
TPCCA_RS03215	COG1176	ABC-type spermidine putrescine transport system, permease component I
TPCCA_RS03220	COG1177	transmembrane transport
TPCCA_RS03255	COG0191	fructose-bisphosphate aldolase activity
TPCCA_RS03280	COG0572	uridine kinase
TPCCA_RS03295	COG0587	DNA-directed DNA polymerase activity
TPCCA_RS03325	COG2840	Smr protein MutS2
TPCCA_RS03330	COG3735	TraB family
TPCCA_RS03350	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
TPCCA_RS03375	COG0142	geranyltranstransferase activity
TPCCA_RS03380	COG1879	ABC-type sugar transport system periplasmic component
TPCCA_RS03385	COG1129	ABC transporter
TPCCA_RS03390	COG4211	Belongs to the binding-protein-dependent transport system permease family
TPCCA_RS03395	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
TPCCA_RS03400	COG1619	proteins homologs of microcin C7 resistance protein MccF
TPCCA_RS03415	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
TPCCA_RS03440	COG0151	Belongs to the GarS family
TPCCA_RS03475	COG0739	heme binding
TPCCA_RS03480	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
TPCCA_RS03480	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
TPCCA_RS03490	COG0741	lytic transglycosylase activity
TPCCA_RS03490	COG1196	nuclear chromosome segregation
TPCCA_RS03490	COG0739	heme binding
TPCCA_RS03505	COG1191	sigma factor activity
TPCCA_RS03525	COG1419	protein localization to endoplasmic reticulum
TPCCA_RS03530	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TPCCA_RS03535	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
TPCCA_RS03540	COG1684	flagellar biosynthetic protein fliR
TPCCA_RS03545	COG1987	bacterial-type flagellum assembly
TPCCA_RS03550	COG1338	Plays a role in the flagellum-specific transport system
TPCCA_RS03560	COG1776	CheC inhibitor of MCP methylation
TPCCA_RS03560	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TPCCA_RS03565	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
TPCCA_RS03570	COG1580	Controls the rotational direction of flagella during chemotaxis
TPCCA_RS03575	COG1360	Flagellar Motor Protein
TPCCA_RS03580	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
TPCCA_RS03590	COG1749	Flagellar hook protein flgE
TPCCA_RS03595	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
TPCCA_RS03625	COG0813	purine-nucleoside phosphorylase activity
TPCCA_RS03630	COG0493	'glutamate synthase
TPCCA_RS03635	COG0543	2 iron, 2 sulfur cluster binding
TPCCA_RS03645	COG0799	negative regulation of ribosome biogenesis
TPCCA_RS03685	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
TPCCA_RS03685	COG0574	Belongs to the PEP-utilizing enzyme family
TPCCA_RS03700	COG2304	oxidoreductase activity
TPCCA_RS03745	COG0768	penicillin binding
TPCCA_RS03750	COG2604	Protein of unknown function DUF115
TPCCA_RS03755	COG2604	Protein of unknown function DUF115
TPCCA_RS03770	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
TPCCA_RS03780	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
TPCCA_RS03790	COG1652	LysM domain
TPCCA_RS03825	COG1285	pathogenesis
TPCCA_RS03830	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
TPCCA_RS03845	COG3956	TIGRFAM MazG family protein
TPCCA_RS03855	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
TPCCA_RS03855	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
TPCCA_RS03860	COG0739	heme binding
TPCCA_RS03880	COG1137	ATPase activity
TPCCA_RS03895	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
TPCCA_RS03910	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TPCCA_RS03925	COG1477	protein flavinylation
TPCCA_RS03930	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
TPCCA_RS03935	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TPCCA_RS03935	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
TPCCA_RS03945	COG1686	Belongs to the peptidase S11 family
TPCCA_RS03950	COG0542	response to heat
TPCCA_RS03960	COG3842	ATPase activity
TPCCA_RS03965	COG0557	exoribonuclease II activity
TPCCA_RS03990	COG0338	D12 class N6 adenine-specific DNA methyltransferase
TPCCA_RS04010	COG0492	ferredoxin-NADP+ reductase activity
TPCCA_RS04040	COG1464	Belongs to the NlpA lipoprotein family
TPCCA_RS04045	COG0668	transmembrane transport
TPCCA_RS04050	COG2033	superoxide reductase activity
TPCCA_RS04100	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
TPCCA_RS04120	COG0488	(ABC) transporter
TPCCA_RS04135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
TPCCA_RS04140	COG0024	Methionine aminopeptidase
TPCCA_RS04145	COG0484	heat shock protein binding
TPCCA_RS04150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
TPCCA_RS04155	COG1671	Belongs to the UPF0178 family
TPCCA_RS04160	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
TPCCA_RS04185	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
TPCCA_RS04190	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
TPCCA_RS04195	COG0455	bacterial-type flagellum organization
TPCCA_RS04225	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
TPCCA_RS04230	COG0545	Peptidyl-prolyl cis-trans isomerase
TPCCA_RS04235	COG1104	cysteine desulfurase activity
TPCCA_RS04240	COG3942	CHAP domain
TPCCA_RS04240	COG1388	LysM domain
TPCCA_RS04260	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TPCCA_RS04270	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
TPCCA_RS04275	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
TPCCA_RS04275	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
TPCCA_RS04290	COG0802	atpase or kinase
TPCCA_RS04295	COG1214	PFAM Peptidase M22, glycoprotease
TPCCA_RS04300	COG2770	Histidine kinase
TPCCA_RS04300	COG3437	response regulator, receiver
TPCCA_RS04320	COG4555	ABC transporter
TPCCA_RS04370	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
TPCCA_RS04380	COG0779	Required for maturation of 30S ribosomal subunits
TPCCA_RS04405	COG2887	Belongs to the helicase family. UvrD subfamily
TPCCA_RS04410	COG0534	Mate efflux family protein
TPCCA_RS04420	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
TPCCA_RS04430	COG1837	Belongs to the UPF0109 family
TPCCA_RS04435	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
TPCCA_RS04440	COG0336	Belongs to the RNA methyltransferase TrmD family
TPCCA_RS04455	COG2257	FlhB HrpN YscU SpaS Family
TPCCA_RS04485	COG2239	Acts as a magnesium transporter
TPCCA_RS04495	COG3118	belongs to the thioredoxin family
TPCCA_RS04500	COG0457	Tetratricopeptide repeat
TPCCA_RS04525	COG2183	response to ionizing radiation
TPCCA_RS04535	COG0716	FMN binding
TPCCA_RS04540	COG0681	Belongs to the peptidase S26 family
TPCCA_RS04550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TPCCA_RS04555	COG2604	Protein of unknown function DUF115
TPCCA_RS04565	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
TPCCA_RS04600	COG0674	pyruvate-flavodoxin oxidoreductase activity
TPCCA_RS04600	COG1013	pyruvate-flavodoxin oxidoreductase activity
TPCCA_RS04600	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
TPCCA_RS04600	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
TPCCA_RS04625	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
TPCCA_RS04635	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
TPCCA_RS04640	COG1847	R3H domain protein
TPCCA_RS04645	COG0706	membrane insertase activity
TPCCA_RS04650	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
TPCCA_RS04655	COG0594	ribonuclease P activity
TPCCA_RS04695	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
TPCCA_RS04695	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
TPCCA_RS04700	COG3951	Flagellar rod assembly protein muramidase FlgJ
TPCCA_RS04720	COG0577	efflux transmembrane transporter activity
TPCCA_RS04720	COG1136	(ABC) transporter
TPCCA_RS04725	COG1136	(ABC) transporter
TPCCA_RS04730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
TPCCA_RS04755	COG3470	protein probably involved in high-affinity Fe2 transport
TPCCA_RS04760	COG0672	)-iron permease
TPCCA_RS04775	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
TPCCA_RS04785	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
TPCCA_RS04790	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
TPCCA_RS04795	COG0084	hydrolase, TatD family'
TPCCA_RS04800	COG3116	cell division
TPCCA_RS04800	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
TPCCA_RS04820	COG0326	Molecular chaperone. Has ATPase activity
TPCCA_RS04840	COG2095	MarC family integral membrane protein
TPCCA_RS04860	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
TPCCA_RS04870	COG0084	hydrolase, TatD family'
TPCCA_RS04890	COG0616	signal peptide processing
TPCCA_RS04895	COG1115	amino acid carrier protein
TPCCA_RS04900	COG1674	ftsk spoiiie
TPCCA_RS04925	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
TPCCA_RS04930	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
TPCCA_RS04935	COG0187	DNA topoisomerase II activity
TPCCA_RS04940	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
TPCCA_RS04945	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
TPCCA_RS04965	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
TPCCA_RS04985	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
TPCCA_RS04990	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
TPCCA_RS04995	COG1418	mRNA catabolic process
TPCCA_RS05000	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
TPCCA_RS05015	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
TPCCA_RS05050	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
TPCCA_RS05060	COG0724	RNA recognition motif
TPCCA_RS05070	COG5341	Protein conserved in bacteria
TPCCA_RS05075	COG1752	Esterase of the alpha-beta hydrolase superfamily
TPCCA_RS05080	COG0530	calcium, potassium:sodium antiporter activity
TPCCA_RS05085	COG0525	valine-tRNA ligase activity
TPCCA_RS05095	COG1272	protein, Hemolysin III
TPCCA_RS05110	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
TPCCA_RS05115	COG0740	serine-type endopeptidase activity