locus-tag class description TPE_RS00005 PF11638 DnaA N-terminal domain TPE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TPE_RS00005 PF00308 Bacterial dnaA protein TPE_RS00015 PF01336 OB-fold nucleic acid binding domain TPE_RS00015 PF00152 tRNA synthetases class II (D, K and N) TPE_RS00020 PF07943 Penicillin-binding protein 5, C-terminal domain TPE_RS00020 PF00768 D-alanyl-D-alanine carboxypeptidase TPE_RS00025 PF02570 Precorrin-8X methylmutase TPE_RS00035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS00035 PF00672 HAMP domain TPE_RS00035 PF02743 Cache domain TPE_RS00060 PF01545 Cation efflux family TPE_RS00060 PF16916 Dimerisation domain of Zinc Transporter TPE_RS00090 PF03023 Lipid II flippase MurJ TPE_RS00095 PF03616 Sodium/glutamate symporter TPE_RS00105 PF12671 Putative amidase domain TPE_RS00120 PF01192 RNA polymerase Rpb6 TPE_RS00125 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS00125 PF09820 Predicted AAA-ATPase TPE_RS00145 PF00691 OmpA family TPE_RS00150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS00150 PF00672 HAMP domain TPE_RS00150 PF12729 Four helix bundle sensory module for signal transduction TPE_RS00155 PF01546 Peptidase family M20/M25/M40 TPE_RS00155 PF07687 Peptidase dimerisation domain TPE_RS00160 PF00849 RNA pseudouridylate synthase TPE_RS00160 PF01479 S4 domain TPE_RS00165 PF04079 Segregation and condensation complex subunit ScpB TPE_RS00170 PF02616 Segregation and condensation protein ScpA TPE_RS00185 PF00391 PEP-utilising enzyme, mobile domain TPE_RS00185 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_RS00200 PF13519 von Willebrand factor type A domain TPE_RS00205 PF18663 Pallilysin beta barrel domain TPE_RS00210 PF00581 Rhodanese-like domain TPE_RS00220 PF01032 FecCD transport family TPE_RS00225 PF00005 ABC transporter TPE_RS00250 PF12804 MobA-like NTP transferase domain TPE_RS00255 PF02028 BCCT, betaine/carnitine/choline family transporter TPE_RS00260 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS00265 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS00270 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_RS00275 PF02028 BCCT, betaine/carnitine/choline family transporter TPE_RS00280 PF01032 FecCD transport family TPE_RS00290 PF00300 Histidine phosphatase superfamily (branch 1) TPE_RS00305 PF01880 Desulfoferrodoxin TPE_RS00315 PF01554 MatE TPE_RS00350 PF05785 Rho-activating domain of cytotoxic necrotizing factor TPE_RS00350 PF18807 Tripartite Tc toxins repeat TPE_RS00605 PF00005 ABC transporter TPE_RS00610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS00610 PF00005 ABC transporter TPE_RS00615 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS00625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS00630 PF02311 AraC-like ligand binding domain TPE_RS00630 PF12833 Helix-turn-helix domain TPE_RS00680 PF10609 NUBPL iron-transfer P-loop NTPase TPE_RS00690 PF01790 Prolipoprotein diacylglyceryl transferase TPE_RS00695 PF02540 NAD synthase TPE_RS00720 PF02390 Putative methyltransferase TPE_RS00740 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS00745 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS00750 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_RS00755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS00755 PF02743 Cache domain TPE_RS00755 PF00672 HAMP domain TPE_RS00760 PF02861 Clp amino terminal domain, pathogenicity island component TPE_RS00760 PF17871 AAA lid domain TPE_RS00760 PF07724 AAA domain (Cdc48 subfamily) TPE_RS00760 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS00760 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_RS00765 PF02617 ATP-dependent Clp protease adaptor protein ClpS TPE_RS00775 PF02677 Epoxyqueuosine reductase QueH TPE_RS00785 PF03793 PASTA domain TPE_RS00785 PF00905 Penicillin binding protein transpeptidase domain TPE_RS00785 PF03717 Penicillin-binding Protein dimerisation domain TPE_RS00805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_RS00805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TPE_RS00810 PF01479 S4 domain TPE_RS00810 PF00163 Ribosomal protein S4/S9 N-terminal domain TPE_RS00825 PF00166 Chaperonin 10 Kd subunit TPE_RS00830 PF04542 Sigma-70 region 2 TPE_RS00830 PF04539 Sigma-70 region 3 TPE_RS00830 PF03979 Sigma-70 factor, region 1.1 TPE_RS00830 PF00140 Sigma-70 factor, region 1.2 TPE_RS00830 PF04545 Sigma-70, region 4 TPE_RS00835 PF01171 PP-loop family TPE_RS00845 PF13180 PDZ domain TPE_RS00850 PF13026 Protein of unknown function (DUF3887) TPE_RS00850 PF12146 Serine aminopeptidase, S33 TPE_RS00855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TPE_RS00855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TPE_RS00870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_RS00875 PF13173 AAA domain TPE_RS00875 PF13635 Domain of unknown function (DUF4143) TPE_RS00880 PF00132 Bacterial transferase hexapeptide (six repeats) TPE_RS00890 PF02719 Polysaccharide biosynthesis protein TPE_RS00895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_RS00915 PF02350 UDP-N-acetylglucosamine 2-epimerase TPE_RS00920 PF00551 Formyl transferase TPE_RS00920 PF02911 Formyl transferase, C-terminal domain TPE_RS00940 PF03102 NeuB family TPE_RS00940 PF08666 SAF domain TPE_RS00945 PF02348 Cytidylyltransferase TPE_RS00950 PF00483 Nucleotidyl transferase TPE_RS00975 PF02350 UDP-N-acetylglucosamine 2-epimerase TPE_RS00980 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TPE_RS00980 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TPE_RS00980 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TPE_RS00995 PF04991 LicD family TPE_RS01005 PF01757 Acyltransferase family TPE_RS01015 PF00483 Nucleotidyl transferase TPE_RS01020 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TPE_RS01025 PF04321 RmlD substrate binding domain TPE_RS01030 PF16363 GDP-mannose 4,6 dehydratase TPE_RS01040 PF03313 Serine dehydratase alpha chain TPE_RS01045 PF03315 Serine dehydratase beta chain TPE_RS01045 PF01842 ACT domain TPE_RS01050 PF05525 Branched-chain amino acid transport protein TPE_RS01065 PF00919 Uncharacterized protein family UPF0004 TPE_RS01065 PF04055 Radical SAM superfamily TPE_RS01120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TPE_RS01120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPE_RS01130 PF13742 OB-fold nucleic acid binding domain TPE_RS01130 PF02601 Exonuclease VII, large subunit TPE_RS01140 PF00005 ABC transporter TPE_RS01145 PF03390 2-hydroxycarboxylate transporter family TPE_RS01150 PF13407 Periplasmic binding protein domain TPE_RS01150 PF18610 Periplasmic binding protein domain TPE_RS01160 PF13439 Glycosyltransferase Family 4 TPE_RS01160 PF00534 Glycosyl transferases group 1 TPE_RS01165 PF00005 ABC transporter TPE_RS01165 PF08402 TOBE domain TPE_RS01170 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS01175 PF00113 Enolase, C-terminal TIM barrel domain TPE_RS01175 PF03952 Enolase, N-terminal domain TPE_RS01185 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS01190 PF00005 ABC transporter TPE_RS01235 PF02254 TrkA-N domain TPE_RS01235 PF02080 TrkA-C domain TPE_RS01240 PF00521 DNA gyrase/topoisomerase IV, subunit A TPE_RS01240 PF03989 DNA gyrase C-terminal domain, beta-propeller TPE_RS01245 PF06418 CTP synthase N-terminus TPE_RS01245 PF00117 Glutamine amidotransferase class-I TPE_RS01255 PF00391 PEP-utilising enzyme, mobile domain TPE_RS01255 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_RS01255 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TPE_RS01260 PF00596 Class II Aldolase and Adducin N-terminal domain TPE_RS01265 PF00072 Response regulator receiver domain TPE_RS01270 PF02631 RecX family TPE_RS01275 PF00380 Ribosomal protein S9/S16 TPE_RS01280 PF00572 Ribosomal protein L13 TPE_RS01290 PF13088 BNR repeat-like domain TPE_RS01290 PF00754 F5/8 type C domain TPE_RS01290 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase TPE_RS01295 PF02743 Cache domain TPE_RS01295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS01295 PF00672 HAMP domain TPE_RS01305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component TPE_RS01315 PF16811 TRAP transporter T-component TPE_RS01330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TPE_RS01335 PF00005 ABC transporter TPE_RS01340 PF00005 ABC transporter TPE_RS01345 PF00005 ABC transporter TPE_RS01350 PF01032 FecCD transport family TPE_RS01400 PF12728 Helix-turn-helix domain TPE_RS01400 PF02661 Fic/DOC family TPE_RS01410 PF01547 Bacterial extracellular solute-binding protein TPE_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS01420 PF00005 ABC transporter TPE_RS01420 PF08402 TOBE domain TPE_RS01430 PF01522 Polysaccharide deacetylase TPE_RS01440 PF00005 ABC transporter TPE_RS01445 PF02632 BioY family TPE_RS01460 PF00571 CBS domain TPE_RS01460 PF00478 IMP dehydrogenase / GMP reductase domain TPE_RS01475 PF01470 Pyroglutamyl peptidase TPE_RS01485 PF13419 Haloacid dehalogenase-like hydrolase TPE_RS01495 PF03781 Sulfatase-modifying factor enzyme 1 TPE_RS01500 PF00072 Response regulator receiver domain TPE_RS01500 PF00196 Bacterial regulatory proteins, luxR family TPE_RS01505 PF02080 TrkA-C domain TPE_RS01505 PF02254 TrkA-N domain TPE_RS01510 PF02386 Cation transport protein TPE_RS01540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TPE_RS01540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TPE_RS01555 PF00448 SRP54-type protein, GTPase domain TPE_RS01555 PF02978 Signal peptide binding domain TPE_RS01555 PF02881 SRP54-type protein, helical bundle domain TPE_RS01565 PF00465 Iron-containing alcohol dehydrogenase TPE_RS01575 PF02223 Thymidylate kinase TPE_RS01585 PF02558 Ketopantoate reductase PanE/ApbA TPE_RS01585 PF08546 Ketopantoate reductase PanE/ApbA C terminal TPE_RS01600 PF07244 Surface antigen variable number repeat TPE_RS01600 PF01103 Surface antigen TPE_RS01610 PF05190 MutS family domain IV TPE_RS01610 PF01624 MutS domain I TPE_RS01610 PF00488 MutS domain V TPE_RS01610 PF05188 MutS domain II TPE_RS01610 PF05192 MutS domain III TPE_RS01620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPE_RS01625 PF02504 Fatty acid synthesis protein TPE_RS01645 PF13847 Methyltransferase domain TPE_RS01660 PF03687 Uncharacterised protein family (UPF0164) TPE_RS01675 PF00005 ABC transporter TPE_RS01695 PF00005 ABC transporter TPE_RS01695 PF00664 ABC transporter transmembrane region TPE_RS01700 PF00005 ABC transporter TPE_RS01700 PF00664 ABC transporter transmembrane region TPE_RS01710 PF01979 Amidohydrolase family TPE_RS01715 PF07075 Protein of unknown function (DUF1343) TPE_RS01720 PF00144 Beta-lactamase TPE_RS01745 PF00005 ABC transporter TPE_RS01765 PF07664 Ferrous iron transport protein B C terminus TPE_RS01765 PF04023 FeoA domain TPE_RS01765 PF17910 FeoB cytosolic helical domain TPE_RS01765 PF02421 Ferrous iron transport protein B TPE_RS01765 PF07670 Nucleoside recognition TPE_RS01800 PF09382 RQC domain TPE_RS01800 PF16124 RecQ zinc-binding TPE_RS01800 PF00270 DEAD/DEAH box helicase TPE_RS01800 PF00570 HRDC domain TPE_RS01800 PF00271 Helicase conserved C-terminal domain TPE_RS01830 PF00149 Calcineurin-like phosphoesterase TPE_RS01830 PF02872 5'-nucleotidase, C-terminal domain TPE_RS01845 PF01168 Alanine racemase, N-terminal domain TPE_RS01855 PF01330 RuvA N terminal domain TPE_RS01860 PF02075 Crossover junction endodeoxyribonuclease RuvC TPE_RS01870 PF00675 Insulinase (Peptidase family M16) TPE_RS01870 PF05193 Peptidase M16 inactive domain TPE_RS01870 PF08367 Peptidase M16C associated TPE_RS01875 PF01171 PP-loop family TPE_RS01875 PF00958 GMP synthase C terminal domain TPE_RS01875 PF00117 Glutamine amidotransferase class-I TPE_RS01885 PF00145 C-5 cytosine-specific DNA methylase TPE_RS01890 PF09561 HpaII restriction endonuclease TPE_RS01895 PF03852 DNA mismatch endonuclease Vsr TPE_RS01895 PF04480 Protein of unknown function (DUF559) TPE_RS01900 PF07475 HPr Serine kinase C-terminal domain TPE_RS01900 PF02603 HPr Serine kinase N terminus TPE_RS01905 PF00381 PTS HPr component phosphorylation site TPE_RS01920 PF12704 MacB-like periplasmic core domain TPE_RS01920 PF02687 FtsX-like permease family TPE_RS01920 PF00005 ABC transporter TPE_RS01925 PF00005 ABC transporter TPE_RS01925 PF02687 FtsX-like permease family TPE_RS01925 PF12704 MacB-like periplasmic core domain TPE_RS01930 PF00152 tRNA synthetases class II (D, K and N) TPE_RS01935 PF00403 Heavy-metal-associated domain TPE_RS01940 PF08264 Anticodon-binding domain of tRNA TPE_RS01940 PF00133 tRNA synthetases class I (I, L, M and V) TPE_RS01940 PF10458 Valyl tRNA synthetase tRNA binding arm TPE_RS01945 PF00005 ABC transporter TPE_RS01945 PF00664 ABC transporter transmembrane region TPE_RS01955 PF01042 Endoribonuclease L-PSP TPE_RS01960 PF00588 SpoU rRNA Methylase family TPE_RS01960 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPE_RS01970 PF00829 Ribosomal prokaryotic L21 protein TPE_RS01980 PF01016 Ribosomal L27 protein TPE_RS01985 PF01018 GTP1/OBG TPE_RS01985 PF01926 50S ribosome-binding GTPase TPE_RS01990 PF01467 Cytidylyltransferase-like TPE_RS02010 PF01869 BadF/BadG/BcrA/BcrD ATPase family TPE_RS02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS02015 PF00672 HAMP domain TPE_RS02015 PF02743 Cache domain TPE_RS02055 PF00471 Ribosomal protein L33 TPE_RS02065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TPE_RS02070 PF02357 Transcription termination factor nusG TPE_RS02070 PF00467 KOW motif TPE_RS02075 PF00298 Ribosomal protein L11, RNA binding domain TPE_RS02075 PF03946 Ribosomal protein L11, N-terminal domain TPE_RS02080 PF00687 Ribosomal protein L1p/L10e family TPE_RS02085 PF00466 Ribosomal protein L10 TPE_RS02090 PF00542 Ribosomal protein L7/L12 C-terminal domain TPE_RS02090 PF16320 Ribosomal protein L7/L12 dimerisation domain TPE_RS02095 PF04561 RNA polymerase Rpb2, domain 2 TPE_RS02095 PF04560 RNA polymerase Rpb2, domain 7 TPE_RS02095 PF10385 RNA polymerase beta subunit external 1 domain TPE_RS02095 PF00562 RNA polymerase Rpb2, domain 6 TPE_RS02095 PF04563 RNA polymerase beta subunit TPE_RS02095 PF04565 RNA polymerase Rpb2, domain 3 TPE_RS02100 PF04983 RNA polymerase Rpb1, domain 3 TPE_RS02100 PF00623 RNA polymerase Rpb1, domain 2 TPE_RS02100 PF04998 RNA polymerase Rpb1, domain 5 TPE_RS02100 PF05000 RNA polymerase Rpb1, domain 4 TPE_RS02100 PF04997 RNA polymerase Rpb1, domain 1 TPE_RS02115 PF08459 UvrC Helix-hairpin-helix N-terminal TPE_RS02115 PF01541 GIY-YIG catalytic domain TPE_RS02115 PF02151 UvrB/uvrC motif TPE_RS02130 PF02073 Thermophilic metalloprotease (M29) TPE_RS02135 PF00266 Aminotransferase class-V TPE_RS02155 PF03129 Anticodon binding domain TPE_RS02155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_RS02155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_RS02160 PF07730 Histidine kinase TPE_RS02165 PF00271 Helicase conserved C-terminal domain TPE_RS02165 PF04408 Helicase associated domain (HA2) TPE_RS02165 PF00270 DEAD/DEAH box helicase TPE_RS02165 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TPE_RS02175 PF01268 Formate--tetrahydrofolate ligase TPE_RS02180 PF00756 Putative esterase TPE_RS02180 PF01476 LysM domain TPE_RS02185 PF05343 M42 glutamyl aminopeptidase TPE_RS02200 PF00501 AMP-binding enzyme TPE_RS02210 PF17932 Tetracyclin repressor-like, C-terminal domain TPE_RS02210 PF00440 Bacterial regulatory proteins, tetR family TPE_RS02215 PF03616 Sodium/glutamate symporter TPE_RS02220 PF00664 ABC transporter transmembrane region TPE_RS02220 PF00005 ABC transporter TPE_RS02235 PF00005 ABC transporter TPE_RS02245 PF00664 ABC transporter transmembrane region TPE_RS02245 PF00005 ABC transporter TPE_RS02255 PF03484 tRNA synthetase B5 domain TPE_RS02255 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TPE_RS02260 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_RS02260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS02265 PF01813 ATP synthase subunit D TPE_RS02280 PF13277 YmdB-like protein TPE_RS02290 PF03477 ATP cone domain TPE_RS02290 PF00317 Ribonucleotide reductase, all-alpha domain TPE_RS02290 PF02867 Ribonucleotide reductase, barrel domain TPE_RS02295 PF00266 Aminotransferase class-V TPE_RS02300 PF01761 3-dehydroquinate synthase TPE_RS02305 PF01048 Phosphorylase superfamily TPE_RS02310 PF01595 Cyclin M transmembrane N-terminal domain TPE_RS02310 PF00571 CBS domain TPE_RS02310 PF03471 Transporter associated domain TPE_RS02315 PF03471 Transporter associated domain TPE_RS02315 PF01595 Cyclin M transmembrane N-terminal domain TPE_RS02315 PF00571 CBS domain TPE_RS02325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS02330 PF00005 ABC transporter TPE_RS02330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS02335 PF00005 ABC transporter TPE_RS02335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS02340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS02345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS02350 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS02350 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS02355 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS02385 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS02390 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS02435 PF12729 Four helix bundle sensory module for signal transduction TPE_RS02435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS02435 PF00672 HAMP domain TPE_RS02450 PF00672 HAMP domain TPE_RS02450 PF01627 Hpt domain TPE_RS02450 PF00072 Response regulator receiver domain TPE_RS02450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) TPE_RS02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_RS02450 PF00512 His Kinase A (phospho-acceptor) domain TPE_RS02455 PF00072 Response regulator receiver domain TPE_RS02465 PF08241 Methyltransferase domain TPE_RS02480 PF00753 Metallo-beta-lactamase superfamily TPE_RS02490 PF00075 RNase H TPE_RS02495 PF00793 DAHP synthetase I family TPE_RS02500 PF02568 Thiamine biosynthesis protein (ThiI) TPE_RS02500 PF02926 THUMP domain TPE_RS02510 PF00005 ABC transporter TPE_RS02525 PF12169 DNA polymerase III subunits gamma and tau domain III TPE_RS02530 PF00183 Hsp90 protein TPE_RS02545 PF03979 Sigma-70 factor, region 1.1 TPE_RS02545 PF00140 Sigma-70 factor, region 1.2 TPE_RS02545 PF04542 Sigma-70 region 2 TPE_RS02545 PF04539 Sigma-70 region 3 TPE_RS02545 PF04545 Sigma-70, region 4 TPE_RS02565 PF01812 5-formyltetrahydrofolate cyclo-ligase family TPE_RS02570 PF00497 Bacterial extracellular solute-binding proteins, family 3 TPE_RS02585 PF00080 Copper/zinc superoxide dismutase (SODC) TPE_RS02595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_RS02595 PF07196 Flagellin hook IN motif TPE_RS02600 PF07196 Flagellin hook IN motif TPE_RS02600 PF00669 Bacterial flagellin N-terminal helical region TPE_RS02600 PF00700 Bacterial flagellin C-terminal helical region TPE_RS02605 PF00672 HAMP domain TPE_RS02605 PF02743 Cache domain TPE_RS02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS02620 PF01026 TatD related DNase TPE_RS02625 PF01207 Dihydrouridine synthase (Dus) TPE_RS02630 PF09820 Predicted AAA-ATPase TPE_RS02630 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS02635 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_RS02640 PF00258 Flavodoxin TPE_RS02655 PF01066 CDP-alcohol phosphatidyltransferase TPE_RS02660 PF00953 Glycosyl transferase family 4 TPE_RS02665 PF00448 SRP54-type protein, GTPase domain TPE_RS02670 PF10609 NUBPL iron-transfer P-loop NTPase TPE_RS02680 PF04545 Sigma-70, region 4 TPE_RS02680 PF04542 Sigma-70 region 2 TPE_RS02680 PF04539 Sigma-70 region 3 TPE_RS02710 PF00268 Ribonucleotide reductase, small chain TPE_RS02715 PF01594 AI-2E family transporter TPE_RS02720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TPE_RS02735 PF01791 DeoC/LacD family aldolase TPE_RS02740 PF09820 Predicted AAA-ATPase TPE_RS02740 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS02745 PF03009 Glycerophosphoryl diester phosphodiesterase family TPE_RS02750 PF00156 Phosphoribosyl transferase domain TPE_RS02755 PF05746 DALR anticodon binding domain TPE_RS02755 PF03485 Arginyl tRNA synthetase N terminal domain TPE_RS02755 PF00750 tRNA synthetases class I (R) TPE_RS02760 PF17863 AAA lid domain TPE_RS02760 PF07726 ATPase family associated with various cellular activities (AAA) TPE_RS02810 PF01554 MatE TPE_RS02815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TPE_RS02820 PF14572 Phosphoribosyl synthetase-associated domain TPE_RS02820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TPE_RS02830 PF00813 FliP family TPE_RS02840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPE_RS02840 PF04509 CheC-like family TPE_RS02845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TPE_RS02845 PF02154 Flagellar motor switch protein FliM TPE_RS02850 PF03748 Flagellar basal body-associated protein FliL TPE_RS02855 PF13677 Membrane MotB of proton-channel complex MotA/MotB TPE_RS02855 PF00691 OmpA family TPE_RS02860 PF01618 MotA/TolQ/ExbB proton channel family TPE_RS02870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_RS02870 PF07559 Flagellar basal body protein FlaE TPE_RS02870 PF00460 Flagella basal body rod protein TPE_RS02875 PF03963 Flagellar hook capping protein - N-terminal region TPE_RS02885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_RS02890 PF01890 Cobalamin synthesis G C-terminus TPE_RS02890 PF11761 Cobalamin biosynthesis central region TPE_RS02890 PF11760 Cobalamin synthesis G N-terminal TPE_RS02905 PF00005 ABC transporter TPE_RS02915 PF05656 Protein of unknown function (DUF805) TPE_RS02925 PF12705 PD-(D/E)XK nuclease superfamily TPE_RS02930 PF13361 UvrD-like helicase C-terminal domain TPE_RS02930 PF00580 UvrD/REP helicase N-terminal domain TPE_RS02930 PF12705 PD-(D/E)XK nuclease superfamily TPE_RS02940 PF00005 ABC transporter TPE_RS02945 PF00950 ABC 3 transport family TPE_RS02970 PF03144 Elongation factor Tu domain 2 TPE_RS02970 PF00009 Elongation factor Tu GTP binding domain TPE_RS02970 PF03764 Elongation factor G, domain IV TPE_RS02970 PF14492 Elongation Factor G, domain II TPE_RS02970 PF00679 Elongation factor G C-terminus TPE_RS03000 PF01170 Putative RNA methylase family UPF0020 TPE_RS03000 PF02926 THUMP domain TPE_RS03010 PF03412 Peptidase C39 family TPE_RS03010 PF00005 ABC transporter TPE_RS03010 PF00664 ABC transporter transmembrane region TPE_RS03015 PF00664 ABC transporter transmembrane region TPE_RS03015 PF00005 ABC transporter TPE_RS03055 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPE_RS03060 PF02086 D12 class N6 adenine-specific DNA methyltransferase TPE_RS03090 PF00005 ABC transporter TPE_RS03105 PF10127 RNA repair pathway DNA polymerase beta family TPE_RS03125 PF02872 5'-nucleotidase, C-terminal domain TPE_RS03125 PF00149 Calcineurin-like phosphoesterase TPE_RS03135 PF08544 GHMP kinases C terminal TPE_RS03135 PF00288 GHMP kinases N terminal domain TPE_RS03135 PF10509 Galactokinase galactose-binding signature TPE_RS03140 PF00342 Phosphoglucose isomerase TPE_RS03145 PF01926 50S ribosome-binding GTPase TPE_RS03155 PF13193 AMP-binding enzyme C-terminal domain TPE_RS03155 PF00501 AMP-binding enzyme TPE_RS03180 PF01409 tRNA synthetases class II core domain (F) TPE_RS03190 PF01546 Peptidase family M20/M25/M40 TPE_RS03190 PF07687 Peptidase dimerisation domain TPE_RS03210 PF00005 ABC transporter TPE_RS03235 PF09827 CRISPR associated protein Cas2 TPE_RS03265 PF00664 ABC transporter transmembrane region TPE_RS03265 PF00005 ABC transporter TPE_RS03270 PF04954 Siderophore-interacting protein TPE_RS03270 PF00005 ABC transporter TPE_RS03270 PF08021 Siderophore-interacting FAD-binding domain TPE_RS03270 PF00664 ABC transporter transmembrane region TPE_RS03280 PF00005 ABC transporter TPE_RS03290 PF12833 Helix-turn-helix domain TPE_RS03290 PF02311 AraC-like ligand binding domain TPE_RS03315 PF04607 Region found in RelA / SpoT proteins TPE_RS03320 PF00883 Cytosol aminopeptidase family, catalytic domain TPE_RS03320 PF02789 Cytosol aminopeptidase family, N-terminal domain TPE_RS03340 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family TPE_RS03345 PF00664 ABC transporter transmembrane region TPE_RS03345 PF00005 ABC transporter TPE_RS03355 PF00571 CBS domain TPE_RS03355 PF01769 Divalent cation transporter TPE_RS03355 PF03448 MgtE intracellular N domain TPE_RS03375 PF02151 UvrB/uvrC motif TPE_RS03375 PF12344 Ultra-violet resistance protein B TPE_RS03375 PF17757 UvrB interaction domain TPE_RS03375 PF00271 Helicase conserved C-terminal domain TPE_RS03375 PF04851 Type III restriction enzyme, res subunit TPE_RS03400 PF07676 WD40-like Beta Propeller Repeat TPE_RS03400 PF00326 Prolyl oligopeptidase family TPE_RS03410 PF01979 Amidohydrolase family TPE_RS03420 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TPE_RS03420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TPE_RS03420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TPE_RS03430 PF01204 Trehalase TPE_RS03435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_RS03435 PF03129 Anticodon binding domain TPE_RS03455 PF00933 Glycosyl hydrolase family 3 N terminal domain TPE_RS03455 PF01915 Glycosyl hydrolase family 3 C-terminal domain TPE_RS03475 PF02557 D-alanyl-D-alanine carboxypeptidase TPE_RS03480 PF01740 STAS domain TPE_RS03495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TPE_RS03495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TPE_RS03500 PF00326 Prolyl oligopeptidase family TPE_RS03500 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_RS03505 PF03960 ArsC family TPE_RS03520 PF01725 Ham1 family TPE_RS03525 PF01207 Dihydrouridine synthase (Dus) TPE_RS03530 PF01235 Sodium:alanine symporter family TPE_RS03535 PF00708 Acylphosphatase TPE_RS03555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TPE_RS03555 PF00128 Alpha amylase, catalytic domain TPE_RS03565 PF00375 Sodium:dicarboxylate symporter family TPE_RS03570 PF00291 Pyridoxal-phosphate dependent enzyme TPE_RS03575 PF00749 tRNA synthetases class I (E and Q), catalytic domain TPE_RS03580 PF13180 PDZ domain TPE_RS03585 PF01139 tRNA-splicing ligase RtcB TPE_RS03590 PF00464 Serine hydroxymethyltransferase TPE_RS03595 PF01588 Putative tRNA binding domain TPE_RS03595 PF09334 tRNA synthetases class I (M) TPE_RS03600 PF03099 Biotin/lipoate A/B protein ligase family TPE_RS03600 PF10437 Bacterial lipoate protein ligase C-terminus TPE_RS03605 PF04055 Radical SAM superfamily TPE_RS03605 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family TPE_RS03610 PF01841 Transglutaminase-like superfamily TPE_RS03625 PF01406 tRNA synthetases class I (C) catalytic domain TPE_RS03625 PF09190 DALR domain TPE_RS03630 PF01145 SPFH domain / Band 7 family TPE_RS03635 PF01145 SPFH domain / Band 7 family TPE_RS03640 PF01226 Formate/nitrite transporter TPE_RS03645 PF02768 DNA polymerase III beta subunit, C-terminal domain TPE_RS03645 PF02767 DNA polymerase III beta subunit, central domain TPE_RS03645 PF00712 DNA polymerase III beta subunit, N-terminal domain TPE_RS03650 PF02463 RecF/RecN/SMC N terminal domain TPE_RS03655 PF13649 Methyltransferase domain TPE_RS03670 PF00962 Adenosine/AMP deaminase TPE_RS03680 PF01430 Hsp33 protein TPE_RS03690 PF02547 Queuosine biosynthesis protein TPE_RS03705 PF00005 ABC transporter TPE_RS03715 PF08264 Anticodon-binding domain of tRNA TPE_RS03715 PF00133 tRNA synthetases class I (I, L, M and V) TPE_RS03720 PF04225 Opacity-associated protein A LysM-like domain TPE_RS03720 PF01551 Peptidase family M23 TPE_RS03730 PF03885 Protein of unknown function (DUF327) TPE_RS03735 PF04468 PSP1 C-terminal conserved region TPE_RS03750 PF03824 High-affinity nickel-transport protein TPE_RS03760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS03760 PF02743 Cache domain TPE_RS03760 PF00672 HAMP domain TPE_RS03765 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TPE_RS03765 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TPE_RS03765 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TPE_RS03765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPE_RS03765 PF10371 Domain of unknown function TPE_RS03770 PF00005 ABC transporter TPE_RS03770 PF00664 ABC transporter transmembrane region TPE_RS03775 PF03412 Peptidase C39 family TPE_RS03775 PF00005 ABC transporter TPE_RS03775 PF00664 ABC transporter transmembrane region TPE_RS03780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPE_RS03780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPE_RS03780 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TPE_RS03780 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TPE_RS03785 PF00730 HhH-GPD superfamily base excision DNA repair protein TPE_RS03790 PF01580 FtsK/SpoIIIE family TPE_RS03790 PF17854 FtsK alpha domain TPE_RS03790 PF09397 Ftsk gamma domain TPE_RS03795 PF02673 Bacitracin resistance protein BacA TPE_RS03805 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPE_RS03810 PF01134 Glucose inhibited division protein A TPE_RS03810 PF13932 GidA associated domain TPE_RS03815 PF02127 Aminopeptidase I zinc metalloprotease (M18) TPE_RS03825 PF03030 Inorganic H+ pyrophosphatase TPE_RS03830 PF00210 Ferritin-like domain TPE_RS03835 PF00326 Prolyl oligopeptidase family TPE_RS03835 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_RS03845 PF13167 GTP-binding GTPase N-terminal TPE_RS03845 PF16360 GTP-binding GTPase Middle Region TPE_RS03845 PF01926 50S ribosome-binding GTPase TPE_RS03850 PF08543 Phosphomethylpyrimidine kinase TPE_RS03855 PF01969 Protein of unknown function DUF111 TPE_RS03860 PF02971 Formiminotransferase domain TPE_RS03860 PF07837 Formiminotransferase domain, N-terminal subdomain TPE_RS03865 PF00155 Aminotransferase class I and II TPE_RS03880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_RS03890 PF01048 Phosphorylase superfamily TPE_RS03895 PF17191 RecG wedge domain TPE_RS03895 PF00270 DEAD/DEAH box helicase TPE_RS03895 PF00271 Helicase conserved C-terminal domain TPE_RS03900 PF07683 Cobalamin synthesis protein cobW C-terminal domain TPE_RS03900 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPE_RS03905 PF00107 Zinc-binding dehydrogenase TPE_RS03905 PF08240 Alcohol dehydrogenase GroES-like domain TPE_RS03910 PF00005 ABC transporter TPE_RS03910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS03915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS03915 PF00005 ABC transporter TPE_RS03920 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS03920 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS03930 PF00274 Fructose-bisphosphate aldolase class-I TPE_RS03935 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS03935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_RS03945 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system TPE_RS03955 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system TPE_RS03965 PF01963 TraB family TPE_RS03980 PF04024 PspC domain TPE_RS03985 PF02561 Flagellar protein FliS TPE_RS03995 PF00176 SNF2 family N-terminal domain TPE_RS03995 PF12419 SNF2 Helicase protein TPE_RS03995 PF00271 Helicase conserved C-terminal domain TPE_RS04000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS04000 PF00672 HAMP domain TPE_RS04005 PF00255 Glutathione peroxidase TPE_RS04010 PF08361 MAATS-type transcriptional repressor, C-terminal region TPE_RS04010 PF00440 Bacterial regulatory proteins, tetR family TPE_RS04015 PF08003 Protein of unknown function (DUF1698) TPE_RS04020 PF04191 Phospholipid methyltransferase TPE_RS04025 PF00005 ABC transporter TPE_RS04025 PF00664 ABC transporter transmembrane region TPE_RS04045 PF01497 Periplasmic binding protein TPE_RS04055 PF00005 ABC transporter TPE_RS04060 PF01032 FecCD transport family TPE_RS04065 PF08241 Methyltransferase domain TPE_RS04115 PF00664 ABC transporter transmembrane region TPE_RS04115 PF00005 ABC transporter TPE_RS04135 PF17239 Family of unknown function (DUF5312) TPE_RS04155 PF01180 Dihydroorotate dehydrogenase TPE_RS04160 PF02875 Mur ligase family, glutamate ligase domain TPE_RS04160 PF08245 Mur ligase middle domain TPE_RS04160 PF01225 Mur ligase family, catalytic domain TPE_RS04170 PF03773 Predicted permease TPE_RS04180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TPE_RS04180 PF14579 Helix-hairpin-helix motif TPE_RS04180 PF02811 PHP domain TPE_RS04180 PF07733 Bacterial DNA polymerase III alpha NTPase domain TPE_RS04190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS04190 PF00672 HAMP domain TPE_RS04190 PF02743 Cache domain TPE_RS04195 PF04324 BFD-like [2Fe-2S] binding domain TPE_RS04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS04200 PF00005 ABC transporter TPE_RS04220 PF01171 PP-loop family TPE_RS04225 PF01925 Sulfite exporter TauE/SafE TPE_RS04235 PF02082 Transcriptional regulator TPE_RS04240 PF13460 NAD(P)H-binding TPE_RS04245 PF03102 NeuB family TPE_RS04245 PF08666 SAF domain TPE_RS04260 PF00817 impB/mucB/samB family TPE_RS04260 PF11799 impB/mucB/samB family C-terminal domain TPE_RS04260 PF11798 IMS family HHH motif TPE_RS04280 PF00005 ABC transporter TPE_RS04300 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TPE_RS04300 PF00037 4Fe-4S binding domain TPE_RS04300 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_RS04305 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPE_RS04305 PF02256 Iron hydrogenase small subunit TPE_RS04305 PF02906 Iron only hydrogenase large subunit, C-terminal domain TPE_RS04305 PF00037 4Fe-4S binding domain TPE_RS04320 PF03062 MBOAT, membrane-bound O-acyltransferase family TPE_RS04325 PF00005 ABC transporter TPE_RS04325 PF08402 TOBE domain TPE_RS04330 PF00210 Ferritin-like domain TPE_RS04335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS04335 PF02743 Cache domain TPE_RS04335 PF00672 HAMP domain TPE_RS04355 PF01206 Sulfurtransferase TusA TPE_RS04365 PF02769 AIR synthase related protein, C-terminal domain TPE_RS04365 PF00586 AIR synthase related protein, N-terminal domain TPE_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS04385 PF00005 ABC transporter TPE_RS04395 PF00005 ABC transporter TPE_RS04400 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TPE_RS04415 PF00436 Single-strand binding protein family TPE_RS04420 PF00731 AIR carboxylase TPE_RS04425 PF03600 Citrate transporter TPE_RS04430 PF09820 Predicted AAA-ATPase TPE_RS04430 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS04440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS04450 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS04455 PF00005 ABC transporter TPE_RS04455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS04460 PF00005 ABC transporter TPE_RS04460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS04465 PF00005 ABC transporter TPE_RS04465 PF00664 ABC transporter transmembrane region TPE_RS04470 PF00664 ABC transporter transmembrane region TPE_RS04470 PF00005 ABC transporter TPE_RS04490 PF09820 Predicted AAA-ATPase TPE_RS04490 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS04495 PF01138 3' exoribonuclease family, domain 1 TPE_RS04495 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TPE_RS04495 PF03725 3' exoribonuclease family, domain 2 TPE_RS04495 PF00575 S1 RNA binding domain TPE_RS04495 PF00013 KH domain TPE_RS04500 PF00312 Ribosomal protein S15 TPE_RS04505 PF06574 FAD synthetase TPE_RS04505 PF01687 Riboflavin kinase TPE_RS04510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS04510 PF00672 HAMP domain TPE_RS04510 PF02743 Cache domain TPE_RS04535 PF00899 ThiF family TPE_RS04540 PF00953 Glycosyl transferase family 4 TPE_RS04550 PF00860 Permease family TPE_RS04560 PF01569 PAP2 superfamily TPE_RS04565 PF10396 GTP-binding protein TrmE N-terminus TPE_RS04565 PF12631 MnmE helical domain TPE_RS04565 PF01926 50S ribosome-binding GTPase TPE_RS04575 PF10502 Signal peptidase, peptidase S26 TPE_RS04590 PF04055 Radical SAM superfamily TPE_RS04590 PF00919 Uncharacterized protein family UPF0004 TPE_RS04590 PF18693 TRAM domain TPE_RS04605 PF00672 HAMP domain TPE_RS04605 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_RS04610 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_RS04615 PF13419 Haloacid dehalogenase-like hydrolase TPE_RS04620 PF00501 AMP-binding enzyme TPE_RS04620 PF13193 AMP-binding enzyme C-terminal domain TPE_RS04625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS04635 PF01661 Macro domain TPE_RS04650 PF00005 ABC transporter TPE_RS04665 PF01381 Helix-turn-helix TPE_RS04665 PF00145 C-5 cytosine-specific DNA methylase TPE_RS04670 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS04670 PF17862 AAA+ lid domain TPE_RS04670 PF06480 FtsH Extracellular TPE_RS04670 PF01434 Peptidase family M41 TPE_RS04735 PF03069 Acetamidase/Formamidase family TPE_RS04780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TPE_RS04780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TPE_RS04785 PF12392 Collagenase TPE_RS04785 PF01136 Peptidase family U32 TPE_RS04790 PF02540 NAD synthase TPE_RS04795 PF00664 ABC transporter transmembrane region TPE_RS04795 PF00005 ABC transporter TPE_RS04805 PF00005 ABC transporter TPE_RS04805 PF00664 ABC transporter transmembrane region TPE_RS04820 PF12557 Cob(I)alamin adenosyltransferase N terminal TPE_RS04820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TPE_RS04825 PF02195 ParB-like nuclease domain TPE_RS04825 PF17762 HTH domain found in ParB protein TPE_RS04830 PF13614 AAA domain TPE_RS04835 PF00672 HAMP domain TPE_RS04835 PF02743 Cache domain TPE_RS04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS04845 PF00392 Bacterial regulatory proteins, gntR family TPE_RS04845 PF07729 FCD domain TPE_RS04850 PF03390 2-hydroxycarboxylate transporter family TPE_RS04855 PF00682 HMGL-like TPE_RS04855 PF02436 Conserved carboxylase domain TPE_RS04855 PF00364 Biotin-requiring enzyme TPE_RS04865 PF00364 Biotin-requiring enzyme TPE_RS04870 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TPE_RS04875 PF06857 Malonate decarboxylase delta subunit (MdcD) TPE_RS04880 PF03328 HpcH/HpaI aldolase/citrate lyase family TPE_RS04885 PF04223 Citrate lyase, alpha subunit (CitF) TPE_RS04900 PF01343 Peptidase family S49 TPE_RS04905 PF01926 50S ribosome-binding GTPase TPE_RS04905 PF06071 Protein of unknown function (DUF933) TPE_RS04920 PF08245 Mur ligase middle domain TPE_RS04920 PF02875 Mur ligase family, glutamate ligase domain TPE_RS04925 PF02608 ABC transporter substrate-binding protein PnrA-like TPE_RS04930 PF00005 ABC transporter TPE_RS04935 PF02653 Branched-chain amino acid transport system / permease component TPE_RS04940 PF02653 Branched-chain amino acid transport system / permease component TPE_RS04945 PF13941 MutL protein TPE_RS04950 PF02310 B12 binding domain TPE_RS04960 PF00005 ABC transporter TPE_RS04965 PF01266 FAD dependent oxidoreductase TPE_RS04985 PF01515 Phosphate acetyl/butaryl transferase TPE_RS04990 PF13176 Tetratricopeptide repeat TPE_RS04990 PF13174 Tetratricopeptide repeat TPE_RS04995 PF08439 Oligopeptidase F TPE_RS04995 PF01432 Peptidase family M3 TPE_RS05000 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_RS05000 PF02861 Clp amino terminal domain, pathogenicity island component TPE_RS05000 PF17871 AAA lid domain TPE_RS05000 PF07724 AAA domain (Cdc48 subfamily) TPE_RS05000 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS05005 PF01202 Shikimate kinase TPE_RS05015 PF01416 tRNA pseudouridine synthase TPE_RS05020 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) TPE_RS05025 PF01680 SOR/SNZ family TPE_RS05035 PF01066 CDP-alcohol phosphatidyltransferase TPE_RS05045 PF02743 Cache domain TPE_RS05045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS05045 PF00672 HAMP domain TPE_RS05050 PF07724 AAA domain (Cdc48 subfamily) TPE_RS05050 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_RS05050 PF06689 ClpX C4-type zinc finger TPE_RS05055 PF00574 Clp protease TPE_RS05060 PF05697 Bacterial trigger factor protein (TF) TPE_RS05060 PF05698 Bacterial trigger factor protein (TF) C-terminus TPE_RS05060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_RS05075 PF00155 Aminotransferase class I and II TPE_RS05090 PF00072 Response regulator receiver domain TPE_RS05100 PF01584 CheW-like domain TPE_RS05105 PF07194 P2 response regulator binding domain TPE_RS05105 PF01627 Hpt domain TPE_RS05105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_RS05105 PF02895 Signal transducing histidine kinase, homodimeric domain TPE_RS05105 PF01584 CheW-like domain TPE_RS05120 PF00814 Glycoprotease family TPE_RS05135 PF01106 NifU-like domain TPE_RS05135 PF01521 Iron-sulphur cluster biosynthesis TPE_RS05140 PF00692 dUTPase TPE_RS05145 PF16258 Domain of unknown function (DUF4912) TPE_RS05155 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS05155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPE_RS05160 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TPE_RS05160 PF00175 Oxidoreductase NAD-binding domain TPE_RS05160 PF00970 Oxidoreductase FAD-binding domain TPE_RS05175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TPE_RS05185 PF01799 [2Fe-2S] binding domain TPE_RS05185 PF00111 2Fe-2S iron-sulfur cluster binding domain TPE_RS05190 PF00941 FAD binding domain in molybdopterin dehydrogenase TPE_RS05190 PF03450 CO dehydrogenase flavoprotein C-terminal domain TPE_RS05200 PF00154 recA bacterial DNA recombination protein TPE_RS05205 PF01313 Bacterial export proteins, family 3 TPE_RS05210 PF01311 Bacterial export proteins, family 1 TPE_RS05215 PF01312 FlhB HrpN YscU SpaS Family TPE_RS05220 PF00771 FHIPEP family TPE_RS05235 PF00403 Heavy-metal-associated domain TPE_RS05245 PF02954 Bacterial regulatory protein, Fis family TPE_RS05245 PF00158 Sigma-54 interaction domain TPE_RS05265 PF00834 Ribulose-phosphate 3 epimerase family TPE_RS05290 PF00005 ABC transporter TPE_RS05295 PF01551 Peptidase family M23 TPE_RS05295 PF04225 Opacity-associated protein A LysM-like domain TPE_RS05300 PF12072 Domain of unknown function (DUF3552) TPE_RS05300 PF00013 KH domain TPE_RS05300 PF01966 HD domain TPE_RS05325 PF00521 DNA gyrase/topoisomerase IV, subunit A TPE_RS05330 PF01497 Periplasmic binding protein TPE_RS05335 PF01032 FecCD transport family TPE_RS05340 PF00005 ABC transporter TPE_RS05360 PF00005 ABC transporter TPE_RS05360 PF00664 ABC transporter transmembrane region TPE_RS05365 PF00005 ABC transporter TPE_RS05365 PF03412 Peptidase C39 family TPE_RS05365 PF00664 ABC transporter transmembrane region TPE_RS05390 PF00005 ABC transporter TPE_RS05400 PF00005 ABC transporter TPE_RS05405 PF02571 Precorrin-6x reductase CbiJ/CobK TPE_RS05410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TPE_RS05410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_RS05415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS05415 PF00672 HAMP domain TPE_RS05415 PF12729 Four helix bundle sensory module for signal transduction TPE_RS05420 PF07685 CobB/CobQ-like glutamine amidotransferase domain TPE_RS05420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TPE_RS05425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_RS05430 PF06180 Cobalt chelatase (CbiK) TPE_RS05445 PF02743 Cache domain TPE_RS05445 PF00672 HAMP domain TPE_RS05445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS05450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_RS05450 PF13237 4Fe-4S dicluster domain TPE_RS05450 PF13375 RnfC Barrel sandwich hybrid domain TPE_RS05450 PF10531 SLBB domain TPE_RS05455 PF03116 NQR2, RnfD, RnfE family TPE_RS05460 PF04205 FMN-binding domain TPE_RS05465 PF02508 Rnf-Nqr subunit, membrane protein TPE_RS05470 PF02508 Rnf-Nqr subunit, membrane protein TPE_RS05475 PF07476 Methylaspartate ammonia-lyase C-terminus TPE_RS05475 PF05034 Methylaspartate ammonia-lyase N-terminus TPE_RS05490 PF02021 Uncharacterised protein family UPF0102 TPE_RS05495 PF00072 Response regulator receiver domain TPE_RS05500 PF01312 FlhB HrpN YscU SpaS Family TPE_RS05510 PF04452 RNA methyltransferase TPE_RS05520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TPE_RS05520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TPE_RS05525 PF00849 RNA pseudouridylate synthase TPE_RS05530 PF02527 rRNA small subunit methyltransferase G TPE_RS05535 PF00171 Aldehyde dehydrogenase family TPE_RS05540 PF03553 Na+/H+ antiporter family TPE_RS05545 PF06368 Methylaspartate mutase E chain (MutE) TPE_RS05550 PF00266 Aminotransferase class-V TPE_RS05565 PF03880 DbpA RNA binding domain TPE_RS05570 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_RS05575 PF01554 MatE TPE_RS05580 PF00149 Calcineurin-like phosphoesterase TPE_RS05585 PF13476 AAA domain TPE_RS05605 PF14353 CpXC protein TPE_RS05610 PF01479 S4 domain TPE_RS05610 PF00849 RNA pseudouridylate synthase TPE_RS05630 PF00561 alpha/beta hydrolase fold TPE_RS05655 PF01425 Amidase TPE_RS05675 PF13545 Crp-like helix-turn-helix domain TPE_RS05675 PF00027 Cyclic nucleotide-binding domain TPE_RS05690 PF01613 Flavin reductase like domain TPE_RS05690 PF00753 Metallo-beta-lactamase superfamily TPE_RS05705 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS05715 PF00085 Thioredoxin TPE_RS05720 PF04723 Glycine reductase complex selenoprotein A TPE_RS05725 PF04723 Glycine reductase complex selenoprotein A TPE_RS05730 PF03006 Haemolysin-III related TPE_RS05745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TPE_RS05780 PF01494 FAD binding domain TPE_RS05785 PF01209 ubiE/COQ5 methyltransferase family TPE_RS05795 PF00348 Polyprenyl synthetase TPE_RS05800 PF02589 LUD domain TPE_RS05800 PF13183 4Fe-4S dicluster domain TPE_RS05800 PF11870 Domain of unknown function (DUF3390) TPE_RS05810 PF00005 ABC transporter TPE_RS05815 PF02374 Anion-transporting ATPase TPE_RS05815 PF17886 HSP20-like domain found in ArsA TPE_RS05820 PF17886 HSP20-like domain found in ArsA TPE_RS05820 PF02374 Anion-transporting ATPase TPE_RS05825 PF02652 L-lactate permease TPE_RS05830 PF01012 Electron transfer flavoprotein domain TPE_RS05835 PF00766 Electron transfer flavoprotein FAD-binding domain TPE_RS05835 PF01012 Electron transfer flavoprotein domain TPE_RS05845 PF09820 Predicted AAA-ATPase TPE_RS05845 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS05955 PF01555 DNA methylase TPE_RS05970 PF01934 Protein of unknown function DUF86 TPE_RS05985 PF13195 Protein of unknown function (DUF4011) TPE_RS05985 PF13086 AAA domain TPE_RS05985 PF13087 AAA domain TPE_RS06040 PF00300 Histidine phosphatase superfamily (branch 1) TPE_RS06050 PF06463 Molybdenum Cofactor Synthesis C TPE_RS06050 PF04055 Radical SAM superfamily TPE_RS06070 PF02661 Fic/DOC family TPE_RS06070 PF12728 Helix-turn-helix domain TPE_RS06155 PF01048 Phosphorylase superfamily TPE_RS06325 PF05076 Suppressor of fused protein (SUFU) TPE_RS06335 PF00561 alpha/beta hydrolase fold TPE_RS06360 PF00664 ABC transporter transmembrane region TPE_RS06360 PF00005 ABC transporter TPE_RS06395 PF00248 Aldo/keto reductase family TPE_RS06440 PF09820 Predicted AAA-ATPase TPE_RS06440 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS06445 PF12833 Helix-turn-helix domain TPE_RS06445 PF02311 AraC-like ligand binding domain TPE_RS06450 PF00664 ABC transporter transmembrane region TPE_RS06450 PF00005 ABC transporter TPE_RS06455 PF00005 ABC transporter TPE_RS06455 PF00664 ABC transporter transmembrane region TPE_RS06490 PF03601 Conserved hypothetical protein 698 TPE_RS06500 PF00005 ABC transporter TPE_RS06510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS06510 PF00672 HAMP domain TPE_RS06510 PF02743 Cache domain TPE_RS06515 PF03537 Glycoside-hydrolase family GH114 TPE_RS06520 PF02608 ABC transporter substrate-binding protein PnrA-like TPE_RS06525 PF00005 ABC transporter TPE_RS06530 PF02653 Branched-chain amino acid transport system / permease component TPE_RS06535 PF02653 Branched-chain amino acid transport system / permease component TPE_RS06550 PF00162 Phosphoglycerate kinase TPE_RS06555 PF01520 N-acetylmuramoyl-L-alanine amidase TPE_RS06565 PF04620 Flagellar filament outer layer protein Flaa TPE_RS06575 PF01649 Ribosomal protein S20 TPE_RS06580 PF00216 Bacterial DNA-binding protein TPE_RS06585 PF00795 Carbon-nitrogen hydrolase TPE_RS06595 PF18146 Damage-inducible protein CinA KH domain TPE_RS06595 PF02464 Competence-damaged protein TPE_RS06595 PF00994 Probable molybdopterin binding domain TPE_RS06600 PF00892 EamA-like transporter family TPE_RS06605 PF03313 Serine dehydratase alpha chain TPE_RS06610 PF02743 Cache domain TPE_RS06610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS06610 PF00672 HAMP domain TPE_RS06615 PF13735 tRNA nucleotidyltransferase domain 2 putative TPE_RS06615 PF01743 Poly A polymerase head domain TPE_RS06615 PF12627 Probable RNA and SrmB- binding site of polymerase A TPE_RS06625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS06635 PF00664 ABC transporter transmembrane region TPE_RS06635 PF00005 ABC transporter TPE_RS06640 PF00005 ABC transporter TPE_RS06640 PF00664 ABC transporter transmembrane region TPE_RS06670 PF01702 Queuine tRNA-ribosyltransferase TPE_RS06675 PF12850 Calcineurin-like phosphoesterase superfamily domain TPE_RS06690 PF03948 Ribosomal protein L9, C-terminal domain TPE_RS06690 PF01281 Ribosomal protein L9, N-terminal domain TPE_RS06695 PF01084 Ribosomal protein S18 TPE_RS06700 PF00436 Single-strand binding protein family TPE_RS06705 PF01250 Ribosomal protein S6 TPE_RS06715 PF05593 RHS Repeat TPE_RS06715 PF05488 PAAR motif TPE_RS06740 PF00860 Permease family TPE_RS06755 PF01888 CbiD TPE_RS06760 PF01228 Glycine radical TPE_RS06760 PF02901 Pyruvate formate lyase-like TPE_RS06765 PF04055 Radical SAM superfamily TPE_RS06770 PF00011 Hsp20/alpha crystallin family TPE_RS06780 PF16314 Domain of unknown function (DUF4954) TPE_RS06805 PF00664 ABC transporter transmembrane region TPE_RS06805 PF00005 ABC transporter TPE_RS06810 PF00005 ABC transporter TPE_RS06810 PF00664 ABC transporter transmembrane region TPE_RS06815 PF00005 ABC transporter TPE_RS06820 PF01032 FecCD transport family TPE_RS06825 PF01497 Periplasmic binding protein TPE_RS06830 PF17200 Single Cache domain 2 TPE_RS06830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS06830 PF00672 HAMP domain TPE_RS06835 PF01339 CheB methylesterase TPE_RS06835 PF00072 Response regulator receiver domain TPE_RS06840 PF01739 CheR methyltransferase, SAM binding domain TPE_RS06840 PF03705 CheR methyltransferase, all-alpha domain TPE_RS06855 PF00005 ABC transporter TPE_RS06855 PF12399 Branched-chain amino acid ATP-binding cassette transporter TPE_RS06860 PF03358 NADPH-dependent FMN reductase TPE_RS06860 PF00890 FAD binding domain TPE_RS06860 PF04205 FMN-binding domain TPE_RS06865 PF01966 HD domain TPE_RS06875 PF01546 Peptidase family M20/M25/M40 TPE_RS06875 PF07687 Peptidase dimerisation domain TPE_RS06880 PF13393 Histidyl-tRNA synthetase TPE_RS06890 PF02654 Cobalamin-5-phosphate synthase TPE_RS06895 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TPE_RS06900 PF01713 Smr domain TPE_RS06900 PF00488 MutS domain V TPE_RS06945 PF01740 STAS domain TPE_RS06965 PF01212 Beta-eliminating lyase TPE_RS06970 PF00005 ABC transporter TPE_RS06980 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS06985 PF01991 ATP synthase (E/31 kDa) subunit TPE_RS07005 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TPE_RS07005 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TPE_RS07010 PF05872 Bacterial protein of unknown function (DUF853) TPE_RS07015 PF01212 Beta-eliminating lyase TPE_RS07020 PF00005 ABC transporter TPE_RS07020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS07025 PF00005 ABC transporter TPE_RS07025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS07030 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS07035 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS07040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS07045 PF00672 HAMP domain TPE_RS07045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS07045 PF02743 Cache domain TPE_RS07070 PF01496 V-type ATPase 116kDa subunit family TPE_RS07085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TPE_RS07085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPE_RS07090 PF03840 Preprotein translocase SecG subunit TPE_RS07100 PF00472 RF-1 domain TPE_RS07100 PF03462 PCRF domain TPE_RS07105 PF05175 Methyltransferase small domain TPE_RS07105 PF17827 PrmC N-terminal domain TPE_RS07115 PF00288 GHMP kinases N terminal domain TPE_RS07115 PF08544 GHMP kinases C terminal TPE_RS07120 PF04026 SpoVG TPE_RS07130 PF14693 Ribosomal protein TL5, C-terminal domain TPE_RS07130 PF01386 Ribosomal L25p family TPE_RS07135 PF00679 Elongation factor G C-terminus TPE_RS07135 PF14492 Elongation Factor G, domain II TPE_RS07135 PF03764 Elongation factor G, domain IV TPE_RS07135 PF00009 Elongation factor Tu GTP binding domain TPE_RS07135 PF03144 Elongation factor Tu domain 2 TPE_RS07145 PF02915 Rubrerythrin TPE_RS07150 PF02690 Na+/Pi-cotransporter TPE_RS07165 PF13520 Amino acid permease TPE_RS07170 PF07722 Peptidase C26 TPE_RS07175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS07175 PF07497 Rho termination factor, RNA-binding domain TPE_RS07175 PF07498 Rho termination factor, N-terminal domain TPE_RS07180 PF02618 YceG-like family TPE_RS07190 PF00753 Metallo-beta-lactamase superfamily TPE_RS07225 PF12002 MgsA AAA+ ATPase C terminal TPE_RS07225 PF16193 AAA C-terminal domain TPE_RS07225 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS07230 PF00005 ABC transporter TPE_RS07235 PF01458 Uncharacterized protein family (UPF0051) TPE_RS07245 PF03466 LysR substrate binding domain TPE_RS07245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TPE_RS07250 PF00005 ABC transporter TPE_RS07260 PF09334 tRNA synthetases class I (M) TPE_RS07260 PF13603 Leucyl-tRNA synthetase, Domain 2 TPE_RS07260 PF00133 tRNA synthetases class I (I, L, M and V) TPE_RS07260 PF08264 Anticodon-binding domain of tRNA TPE_RS07280 PF09028 Mac 1 TPE_RS07290 PF06470 SMC proteins Flexible Hinge Domain TPE_RS07290 PF02463 RecF/RecN/SMC N terminal domain TPE_RS07300 PF13525 Outer membrane lipoprotein TPE_RS07465 PF18807 Tripartite Tc toxins repeat TPE_RS07465 PF05785 Rho-activating domain of cytotoxic necrotizing factor TPE_RS07655 PF04055 Radical SAM superfamily TPE_RS07655 PF06969 HemN C-terminal domain TPE_RS07665 PF00005 ABC transporter TPE_RS07670 PF01032 FecCD transport family TPE_RS07680 PF01321 Creatinase/Prolidase N-terminal domain TPE_RS07680 PF00557 Metallopeptidase family M24 TPE_RS07685 PF02844 Phosphoribosylglycinamide synthetase, N domain TPE_RS07685 PF02843 Phosphoribosylglycinamide synthetase, C domain TPE_RS07685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPE_RS07690 PF01820 D-ala D-ala ligase N-terminus TPE_RS07690 PF07478 D-ala D-ala ligase C-terminus TPE_RS07700 PF03853 YjeF-related protein N-terminus TPE_RS07700 PF01256 Carbohydrate kinase TPE_RS07710 PF03755 YicC-like family, N-terminal region TPE_RS07710 PF08340 Domain of unknown function (DUF1732) TPE_RS07715 PF01225 Mur ligase family, catalytic domain TPE_RS07715 PF02875 Mur ligase family, glutamate ligase domain TPE_RS07715 PF08245 Mur ligase middle domain TPE_RS07720 PF02875 Mur ligase family, glutamate ligase domain TPE_RS07720 PF08245 Mur ligase middle domain TPE_RS07725 PF00849 RNA pseudouridylate synthase TPE_RS07730 PF00849 RNA pseudouridylate synthase TPE_RS07740 PF00398 Ribosomal RNA adenine dimethylase TPE_RS07745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TPE_RS07755 PF01297 Zinc-uptake complex component A periplasmic TPE_RS07760 PF00186 Dihydrofolate reductase TPE_RS07765 PF00809 Pterin binding enzyme TPE_RS07770 PF02152 Dihydroneopterin aldolase TPE_RS07770 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TPE_RS07775 PF01464 Transglycosylase SLT domain TPE_RS07775 PF10145 Phage-related minor tail protein TPE_RS07775 PF01551 Peptidase family M23 TPE_RS07785 PF08281 Sigma-70, region 4 TPE_RS07785 PF04542 Sigma-70 region 2 TPE_RS07800 PF08544 GHMP kinases C terminal TPE_RS07800 PF10509 Galactokinase galactose-binding signature TPE_RS07805 PF00795 Carbon-nitrogen hydrolase TPE_RS07810 PF02554 Carbon starvation protein CstA TPE_RS07815 PF03819 MazG nucleotide pyrophosphohydrolase domain TPE_RS07830 PF13180 PDZ domain TPE_RS07830 PF03572 Peptidase family S41 TPE_RS07835 PF01554 MatE TPE_RS07845 PF00696 Amino acid kinase family TPE_RS07865 PF13307 Helicase C-terminal domain TPE_RS07865 PF06733 DEAD_2 TPE_RS07890 PF18807 Tripartite Tc toxins repeat TPE_RS07890 PF05785 Rho-activating domain of cytotoxic necrotizing factor TPE_RS08065 PF00588 SpoU rRNA Methylase family TPE_RS08065 PF08032 RNA 2'-O ribose methyltransferase substrate binding TPE_RS08070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TPE_RS08070 PF00753 Metallo-beta-lactamase superfamily TPE_RS08070 PF10996 Beta-Casp domain TPE_RS08080 PF02233 NAD(P) transhydrogenase beta subunit TPE_RS08090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TPE_RS08090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TPE_RS08090 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch TPE_RS08095 PF12832 MFS_1 like family TPE_RS08100 PF00005 ABC transporter TPE_RS08100 PF12848 ABC transporter TPE_RS08110 PF00150 Cellulase (glycosyl hydrolase family 5) TPE_RS08125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TPE_RS08125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TPE_RS08130 PF01728 FtsJ-like methyltransferase TPE_RS08135 PF00343 Carbohydrate phosphorylase TPE_RS08150 PF01121 Dephospho-CoA kinase TPE_RS08155 PF01367 5'-3' exonuclease, C-terminal SAM fold TPE_RS08155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TPE_RS08155 PF00476 DNA polymerase family A TPE_RS08155 PF01612 3'-5' exonuclease TPE_RS08165 PF02885 Glycosyl transferase family, helical bundle domain TPE_RS08165 PF00591 Glycosyl transferase family, a/b domain TPE_RS08165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TPE_RS08170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_RS08170 PF02403 Seryl-tRNA synthetase N-terminal domain TPE_RS08195 PF09335 SNARE associated Golgi protein TPE_RS08205 PF00581 Rhodanese-like domain TPE_RS08215 PF00924 Mechanosensitive ion channel TPE_RS08230 PF03781 Sulfatase-modifying factor enzyme 1 TPE_RS08240 PF00581 Rhodanese-like domain TPE_RS08245 PF02627 Carboxymuconolactone decarboxylase family TPE_RS08260 PF01380 SIS domain TPE_RS08270 PF00654 Voltage gated chloride channel TPE_RS08290 PF01368 DHH family TPE_RS08290 PF02272 DHHA1 domain TPE_RS08290 PF17768 RecJ OB domain TPE_RS08290 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TPE_RS08295 PF10397 Adenylosuccinate lyase C-terminus TPE_RS08295 PF00206 Lyase TPE_RS08300 PF08275 DNA primase catalytic core, N-terminal domain TPE_RS08300 PF01807 CHC2 zinc finger TPE_RS08305 PF00140 Sigma-70 factor, region 1.2 TPE_RS08305 PF04542 Sigma-70 region 2 TPE_RS08305 PF03979 Sigma-70 factor, region 1.1 TPE_RS08305 PF04545 Sigma-70, region 4 TPE_RS08305 PF04539 Sigma-70 region 3 TPE_RS08340 PF00905 Penicillin binding protein transpeptidase domain TPE_RS08340 PF03717 Penicillin-binding Protein dimerisation domain TPE_RS08345 PF01098 Cell cycle protein TPE_RS08365 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_RS08365 PF16886 ATPsynthase alpha/beta subunit N-term extension TPE_RS08365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS08370 PF02743 Cache domain TPE_RS08370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS08370 PF00672 HAMP domain TPE_RS08385 PF01813 ATP synthase subunit D TPE_RS08390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS08390 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_RS08395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS08395 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_RS08395 PF16886 ATPsynthase alpha/beta subunit N-term extension TPE_RS08400 PF00156 Phosphoribosyl transferase domain TPE_RS08420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TPE_RS08420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TPE_RS08425 PF01177 Asp/Glu/Hydantoin racemase TPE_RS08435 PF00005 ABC transporter TPE_RS08440 PF00795 Carbon-nitrogen hydrolase TPE_RS08460 PF01709 Transcriptional regulator TPE_RS08465 PF02142 MGS-like domain TPE_RS08465 PF01808 AICARFT/IMPCHase bienzyme TPE_RS08470 PF09820 Predicted AAA-ATPase TPE_RS08470 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS08475 PF02127 Aminopeptidase I zinc metalloprotease (M18) TPE_RS08495 PF07977 FabA-like domain TPE_RS08505 PF01235 Sodium:alanine symporter family TPE_RS08525 PF02417 Chromate transporter TPE_RS08540 PF02562 PhoH-like protein TPE_RS08545 PF01966 HD domain TPE_RS08545 PF07698 7TM receptor with intracellular HD hydrolase TPE_RS08545 PF07697 7TM-HD extracellular TPE_RS08550 PF02130 Uncharacterized protein family UPF0054 TPE_RS08555 PF00571 CBS domain TPE_RS08555 PF03471 Transporter associated domain TPE_RS08560 PF00691 OmpA family TPE_RS08565 PF01132 Elongation factor P (EF-P) OB domain TPE_RS08565 PF09285 Elongation factor P, C-terminal TPE_RS08565 PF08207 Elongation factor P (EF-P) KOW-like domain TPE_RS08600 PF01571 Aminomethyltransferase folate-binding domain TPE_RS08600 PF08669 Glycine cleavage T-protein C-terminal barrel domain TPE_RS08615 PF01597 Glycine cleavage H-protein TPE_RS08620 PF02347 Glycine cleavage system P-protein TPE_RS08625 PF02347 Glycine cleavage system P-protein TPE_RS08630 PF02609 Exonuclease VII small subunit TPE_RS08635 PF01119 DNA mismatch repair protein, C-terminal domain TPE_RS08635 PF08676 MutL C terminal dimerisation domain TPE_RS08640 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TPE_RS08665 PF01668 SmpB protein TPE_RS08670 PF10502 Signal peptidase, peptidase S26 TPE_RS08675 PF04055 Radical SAM superfamily TPE_RS08690 PF02277 Phosphoribosyltransferase TPE_RS08700 PF13277 YmdB-like protein TPE_RS08710 PF00348 Polyprenyl synthetase TPE_RS08725 PF00005 ABC transporter TPE_RS08755 PF01235 Sodium:alanine symporter family TPE_RS08765 PF07687 Peptidase dimerisation domain TPE_RS08765 PF01546 Peptidase family M20/M25/M40 TPE_RS08770 PF10672 S-adenosylmethionine-dependent methyltransferase TPE_RS08770 PF17785 PUA-like domain TPE_RS08775 PF01165 Ribosomal protein S21 TPE_RS08780 PF03120 NAD-dependent DNA ligase OB-fold domain TPE_RS08780 PF01653 NAD-dependent DNA ligase adenylation domain TPE_RS08780 PF00533 BRCA1 C Terminus (BRCT) domain TPE_RS08800 PF00155 Aminotransferase class I and II TPE_RS08805 PF04060 Putative Fe-S cluster TPE_RS08810 PF01926 50S ribosome-binding GTPase TPE_RS08810 PF07650 KH domain TPE_RS08815 PF16921 Tex protein YqgF-like domain TPE_RS08815 PF09371 Tex-like protein N-terminal domain TPE_RS08815 PF00575 S1 RNA binding domain TPE_RS08815 PF17674 HHH domain TPE_RS08820 PF05343 M42 glutamyl aminopeptidase TPE_RS08825 PF00390 Malic enzyme, N-terminal domain TPE_RS08825 PF03949 Malic enzyme, NAD binding domain TPE_RS08840 PF04298 Putative neutral zinc metallopeptidase TPE_RS08845 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TPE_RS08845 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TPE_RS08845 PF01189 16S rRNA methyltransferase RsmB/F TPE_RS08850 PF00849 RNA pseudouridylate synthase TPE_RS08855 PF10672 S-adenosylmethionine-dependent methyltransferase TPE_RS08860 PF02629 CoA binding domain TPE_RS08860 PF06971 Putative DNA-binding protein N-terminus TPE_RS08865 PF00871 Acetokinase family TPE_RS08880 PF04055 Radical SAM superfamily TPE_RS08885 PF04963 Sigma-54 factor, core binding domain TPE_RS08885 PF00309 Sigma-54 factor, Activator interacting domain (AID) TPE_RS08885 PF04552 Sigma-54, DNA binding domain TPE_RS08905 PF13180 PDZ domain TPE_RS08905 PF17820 PDZ domain TPE_RS08910 PF02542 YgbB family TPE_RS08915 PF02542 YgbB family TPE_RS08915 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TPE_RS08920 PF02559 CarD-like/TRCF domain TPE_RS08935 PF12704 MacB-like periplasmic core domain TPE_RS08935 PF00005 ABC transporter TPE_RS08935 PF02687 FtsX-like permease family TPE_RS08945 PF02687 FtsX-like permease family TPE_RS08945 PF12704 MacB-like periplasmic core domain TPE_RS08945 PF00005 ABC transporter TPE_RS08955 PF01300 Telomere recombination TPE_RS08975 PF03707 Bacterial signalling protein N terminal repeat TPE_RS08975 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS08975 PF00563 EAL domain TPE_RS08990 PF00072 Response regulator receiver domain TPE_RS08990 PF00158 Sigma-54 interaction domain TPE_RS08990 PF02954 Bacterial regulatory protein, Fis family TPE_RS08995 PF00575 S1 RNA binding domain TPE_RS09020 PF17760 UvrA interaction domain TPE_RS09020 PF00005 ABC transporter TPE_RS09020 PF17755 UvrA DNA-binding domain TPE_RS09040 PF02463 RecF/RecN/SMC N terminal domain TPE_RS09060 PF01476 LysM domain TPE_RS09065 PF03553 Na+/H+ antiporter family TPE_RS09070 PF01053 Cys/Met metabolism PLP-dependent enzyme TPE_RS09090 PF01351 Ribonuclease HII TPE_RS09100 PF00005 ABC transporter TPE_RS09100 PF12848 ABC transporter TPE_RS09105 PF00232 Glycosyl hydrolase family 1 TPE_RS09110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TPE_RS09115 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS09115 PF09820 Predicted AAA-ATPase TPE_RS09125 PF00773 RNB domain TPE_RS09130 PF05922 Peptidase inhibitor I9 TPE_RS09130 PF00082 Subtilase family TPE_RS09150 PF01263 Aldose 1-epimerase TPE_RS09160 PF03193 RsgA GTPase TPE_RS09165 PF01177 Asp/Glu/Hydantoin racemase TPE_RS09175 PF01921 tRNA synthetases class I (K) TPE_RS09180 PF00155 Aminotransferase class I and II TPE_RS09190 PF05491 RuvB C-terminal winged helix domain TPE_RS09190 PF17864 RuvB AAA lid domain TPE_RS09190 PF05496 Holliday junction DNA helicase RuvB P-loop domain TPE_RS09195 PF00465 Iron-containing alcohol dehydrogenase TPE_RS09200 PF00483 Nucleotidyl transferase TPE_RS09205 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS09205 PF07724 AAA domain (Cdc48 subfamily) TPE_RS09205 PF17871 AAA lid domain TPE_RS09205 PF02861 Clp amino terminal domain, pathogenicity island component TPE_RS09205 PF10431 C-terminal, D2-small domain, of ClpB protein TPE_RS09210 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TPE_RS09215 PF02151 UvrB/uvrC motif TPE_RS09225 PF00005 ABC transporter TPE_RS09230 PF12704 MacB-like periplasmic core domain TPE_RS09230 PF02687 FtsX-like permease family TPE_RS09240 PF02881 SRP54-type protein, helical bundle domain TPE_RS09240 PF00448 SRP54-type protein, GTPase domain TPE_RS09255 PF03462 PCRF domain TPE_RS09255 PF00472 RF-1 domain TPE_RS09270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS09270 PF00672 HAMP domain TPE_RS09270 PF02743 Cache domain TPE_RS09275 PF08534 Redoxin TPE_RS09280 PF13361 UvrD-like helicase C-terminal domain TPE_RS09280 PF00580 UvrD/REP helicase N-terminal domain TPE_RS09290 PF00009 Elongation factor Tu GTP binding domain TPE_RS09290 PF14492 Elongation Factor G, domain II TPE_RS09290 PF00679 Elongation factor G C-terminus TPE_RS09290 PF03764 Elongation factor G, domain IV TPE_RS09290 PF03144 Elongation factor Tu domain 2 TPE_RS09295 PF00156 Phosphoribosyl transferase domain TPE_RS09295 PF13537 Glutamine amidotransferase domain TPE_RS09315 PF01264 Chorismate synthase TPE_RS09320 PF17932 Tetracyclin repressor-like, C-terminal domain TPE_RS09320 PF00440 Bacterial regulatory proteins, tetR family TPE_RS09325 PF00664 ABC transporter transmembrane region TPE_RS09325 PF00005 ABC transporter TPE_RS09330 PF00005 ABC transporter TPE_RS09345 PF12848 ABC transporter TPE_RS09345 PF00005 ABC transporter TPE_RS09345 PF16326 ABC transporter C-terminal domain TPE_RS09350 PF08239 Bacterial SH3 domain TPE_RS09375 PF00005 ABC transporter TPE_RS09375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS09380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS09380 PF00005 ABC transporter TPE_RS09385 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS09385 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS09400 PF01523 Putative modulator of DNA gyrase TPE_RS09410 PF00375 Sodium:dicarboxylate symporter family TPE_RS09420 PF01973 Protein of unknown function DUF115 TPE_RS09425 PF00684 DnaJ central domain TPE_RS09425 PF01556 DnaJ C terminal domain TPE_RS09425 PF00226 DnaJ domain TPE_RS09430 PF00012 Hsp70 protein TPE_RS09435 PF01025 GrpE TPE_RS09440 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TPE_RS09445 PF00586 AIR synthase related protein, N-terminal domain TPE_RS09445 PF02769 AIR synthase related protein, C-terminal domain TPE_RS09450 PF08501 Shikimate dehydrogenase substrate binding domain TPE_RS09450 PF01488 Shikimate / quinate 5-dehydrogenase TPE_RS09450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TPE_RS09455 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TPE_RS09465 PF00456 Transketolase, thiamine diphosphate binding domain TPE_RS09465 PF02779 Transketolase, pyrimidine binding domain TPE_RS09470 PF08279 HTH domain TPE_RS09470 PF02237 Biotin protein ligase C terminal domain TPE_RS09470 PF03099 Biotin/lipoate A/B protein ligase family TPE_RS09475 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TPE_RS09480 PF01039 Carboxyl transferase domain TPE_RS09485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TPE_RS09485 PF00289 Biotin carboxylase, N-terminal domain TPE_RS09485 PF02785 Biotin carboxylase C-terminal domain TPE_RS09490 PF00364 Biotin-requiring enzyme TPE_RS09495 PF12241 Trans-2-enoyl-CoA reductase catalytic region TPE_RS09495 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TPE_RS09495 PF07055 Enoyl reductase FAD binding domain TPE_RS09500 PF00109 Beta-ketoacyl synthase, N-terminal domain TPE_RS09500 PF02801 Beta-ketoacyl synthase, C-terminal domain TPE_RS09510 PF00698 Acyl transferase domain TPE_RS09515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TPE_RS09515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TPE_RS09525 PF02938 GAD domain TPE_RS09525 PF00152 tRNA synthetases class II (D, K and N) TPE_RS09525 PF01336 OB-fold nucleic acid binding domain TPE_RS09540 PF03062 MBOAT, membrane-bound O-acyltransferase family TPE_RS09550 PF01145 SPFH domain / Band 7 family TPE_RS09555 PF01145 SPFH domain / Band 7 family TPE_RS09560 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase TPE_RS09565 PF08218 Citrate lyase ligase C-terminal domain TPE_RS09570 PF05683 Fumarase C-terminus TPE_RS09570 PF05681 Fumarate hydratase (Fumerase) TPE_RS09575 PF05681 Fumarate hydratase (Fumerase) TPE_RS09580 PF00669 Bacterial flagellin N-terminal helical region TPE_RS09580 PF00700 Bacterial flagellin C-terminal helical region TPE_RS09585 PF01584 CheW-like domain TPE_RS09595 PF01513 ATP-NAD kinase TPE_RS09600 PF00664 ABC transporter transmembrane region TPE_RS09600 PF00005 ABC transporter TPE_RS09605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TPE_RS09605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TPE_RS09610 PF00221 Aromatic amino acid lyase TPE_RS09620 PF00005 ABC transporter TPE_RS09635 PF03477 ATP cone domain TPE_RS09770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_RS09770 PF04073 Aminoacyl-tRNA editing domain TPE_RS09770 PF03129 Anticodon binding domain TPE_RS09775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS09775 PF00005 ABC transporter TPE_RS09780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS09780 PF00005 ABC transporter TPE_RS09785 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS09785 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS09790 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS09795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS09800 PF00892 EamA-like transporter family TPE_RS09805 PF05670 NFACT protein RNA binding domain TPE_RS09820 PF00534 Glycosyl transferases group 1 TPE_RS09820 PF08323 Starch synthase catalytic domain TPE_RS09830 PF04260 Protein of unknown function (DUF436) TPE_RS09845 PF00933 Glycosyl hydrolase family 3 N terminal domain TPE_RS09860 PF18269 T3SS EscN ATPase C-terminal domain TPE_RS09860 PF02874 ATP synthase alpha/beta family, beta-barrel domain TPE_RS09860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TPE_RS09865 PF02108 Flagellar assembly protein FliH TPE_RS09870 PF14841 FliG middle domain TPE_RS09870 PF14842 FliG N-terminal domain TPE_RS09870 PF01706 FliG C-terminal domain TPE_RS09875 PF01514 Secretory protein of YscJ/FliF family TPE_RS09875 PF08345 Flagellar M-ring protein C-terminal TPE_RS09880 PF02049 Flagellar hook-basal body complex protein FliE TPE_RS09885 PF00460 Flagella basal body rod protein TPE_RS09885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_RS09890 PF00460 Flagella basal body rod protein TPE_RS09895 PF07724 AAA domain (Cdc48 subfamily) TPE_RS09895 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS09900 PF00227 Proteasome subunit TPE_RS09905 PF02899 Phage integrase, N-terminal SAM-like domain TPE_RS09905 PF00589 Phage integrase family TPE_RS09910 PF01396 Topoisomerase DNA binding C4 zinc finger TPE_RS09910 PF01131 DNA topoisomerase TPE_RS09910 PF01751 Toprim domain TPE_RS09915 PF02481 DNA recombination-mediator protein A TPE_RS09915 PF17782 DprA winged helix domain TPE_RS09925 PF02899 Phage integrase, N-terminal SAM-like domain TPE_RS09925 PF00589 Phage integrase family TPE_RS09930 PF12327 FtsZ family, C-terminal domain TPE_RS09930 PF00091 Tubulin/FtsZ family, GTPase domain TPE_RS09935 PF02491 SHS2 domain inserted in FTSA TPE_RS09945 PF01098 Cell cycle protein TPE_RS09950 PF08245 Mur ligase middle domain TPE_RS09950 PF02875 Mur ligase family, glutamate ligase domain TPE_RS09950 PF01225 Mur ligase family, catalytic domain TPE_RS09960 PF01795 MraW methylase family TPE_RS09965 PF02381 MraZ protein, putative antitoxin-like TPE_RS09975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TPE_RS09975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TPE_RS09980 PF10282 Lactonase, 7-bladed beta-propeller TPE_RS09990 PF00271 Helicase conserved C-terminal domain TPE_RS09990 PF00270 DEAD/DEAH box helicase TPE_RS09995 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS10000 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) TPE_RS10005 PF09338 Glycine/sarcosine/betaine reductase component B subunits TPE_RS10015 PF01205 Uncharacterized protein family UPF0029 TPE_RS10015 PF09186 Domain of unknown function (DUF1949) TPE_RS10035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS10040 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS10045 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS10045 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS10050 PF00005 ABC transporter TPE_RS10050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS10060 PF08241 Methyltransferase domain TPE_RS10065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPE_RS10075 PF06421 GTP-binding protein LepA C-terminus TPE_RS10075 PF00679 Elongation factor G C-terminus TPE_RS10075 PF00009 Elongation factor Tu GTP binding domain TPE_RS10075 PF03144 Elongation factor Tu domain 2 TPE_RS10075 PF14492 Elongation Factor G, domain II TPE_RS10080 PF00156 Phosphoribosyl transferase domain TPE_RS10085 PF00672 HAMP domain TPE_RS10085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS10085 PF02743 Cache domain TPE_RS10090 PF02163 Peptidase family M50 TPE_RS10090 PF17820 PDZ domain TPE_RS10095 PF13288 DXP reductoisomerase C-terminal domain TPE_RS10095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TPE_RS10095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TPE_RS10105 PF01255 Putative undecaprenyl diphosphate synthase TPE_RS10110 PF01765 Ribosome recycling factor TPE_RS10115 PF00889 Elongation factor TS TPE_RS10120 PF00318 Ribosomal protein S2 TPE_RS10200 PF03527 RHS protein TPE_RS10200 PF14220 Domain of unknown function (DUF4329) TPE_RS10200 PF05593 RHS Repeat TPE_RS10250 PF01523 Putative modulator of DNA gyrase TPE_RS10255 PF01523 Putative modulator of DNA gyrase TPE_RS10260 PF06857 Malonate decarboxylase delta subunit (MdcD) TPE_RS10265 PF03328 HpcH/HpaI aldolase/citrate lyase family TPE_RS10270 PF04223 Citrate lyase, alpha subunit (CitF) TPE_RS10275 PF03144 Elongation factor Tu domain 2 TPE_RS10275 PF09106 Elongation factor SelB, winged helix TPE_RS10275 PF09107 Elongation factor SelB, winged helix TPE_RS10275 PF00009 Elongation factor Tu GTP binding domain TPE_RS10275 PF09105 Elongation factor SelB, winged helix TPE_RS10285 PF01176 Translation initiation factor 1A / IF-1 TPE_RS10290 PF00684 DnaJ central domain TPE_RS10290 PF00226 DnaJ domain TPE_RS10290 PF01556 DnaJ C terminal domain TPE_RS10295 PF00696 Amino acid kinase family TPE_RS10300 PF01648 4'-phosphopantetheinyl transferase superfamily TPE_RS10310 PF02457 DisA bacterial checkpoint controller nucleotide-binding TPE_RS10315 PF02780 Transketolase, C-terminal domain TPE_RS10315 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TPE_RS10315 PF02779 Transketolase, pyrimidine binding domain TPE_RS10320 PF17820 PDZ domain TPE_RS10320 PF13180 PDZ domain TPE_RS10325 PF02545 Maf-like protein TPE_RS10340 PF00700 Bacterial flagellin C-terminal helical region TPE_RS10340 PF00669 Bacterial flagellin N-terminal helical region TPE_RS10345 PF00700 Bacterial flagellin C-terminal helical region TPE_RS10345 PF00669 Bacterial flagellin N-terminal helical region TPE_RS10350 PF03646 FlaG protein TPE_RS10355 PF07195 Flagellar hook-associated protein 2 C-terminus TPE_RS10355 PF02465 Flagellar hook-associated protein 2 N-terminus TPE_RS10370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TPE_RS10380 PF00072 Response regulator receiver domain TPE_RS10385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPE_RS10385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPE_RS10385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPE_RS10385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPE_RS10390 PF00929 Exonuclease TPE_RS10395 PF02954 Bacterial regulatory protein, Fis family TPE_RS10395 PF00072 Response regulator receiver domain TPE_RS10395 PF00158 Sigma-54 interaction domain TPE_RS10405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TPE_RS10450 PF13186 Iron-sulfur cluster-binding domain TPE_RS10465 PF01625 Peptide methionine sulfoxide reductase TPE_RS10465 PF01641 SelR domain TPE_RS10470 PF00912 Transglycosylase TPE_RS10470 PF00905 Penicillin binding protein transpeptidase domain TPE_RS10475 PF02623 FliW protein TPE_RS10480 PF02599 Global regulator protein family TPE_RS10485 PF05857 TraX protein TPE_RS10490 PF00579 tRNA synthetases class I (W and Y) TPE_RS10500 PF14537 Cytochrome c3 TPE_RS10500 PF00890 FAD binding domain TPE_RS10530 PF01078 Magnesium chelatase, subunit ChlI TPE_RS10530 PF13335 Magnesium chelatase, subunit ChlI C-terminal TPE_RS10535 PF03806 AbgT putative transporter family TPE_RS10545 PF04551 GcpE protein TPE_RS10565 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS10570 PF01266 FAD dependent oxidoreductase TPE_RS10575 PF00460 Flagella basal body rod protein TPE_RS10575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_RS10580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TPE_RS10580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TPE_RS10595 PF01029 NusB family TPE_RS10600 PF13145 PPIC-type PPIASE domain TPE_RS10605 PF01411 tRNA synthetases class II (A) TPE_RS10605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_RS10625 PF00574 Clp protease TPE_RS10635 PF01195 Peptidyl-tRNA hydrolase TPE_RS10645 PF02887 Pyruvate kinase, alpha/beta domain TPE_RS10645 PF00224 Pyruvate kinase, barrel domain TPE_RS10645 PF00391 PEP-utilising enzyme, mobile domain TPE_RS10650 PF00326 Prolyl oligopeptidase family TPE_RS10665 PF00551 Formyl transferase TPE_RS10695 PF01043 SecA preprotein cross-linking domain TPE_RS10695 PF07517 SecA DEAD-like domain TPE_RS10695 PF02810 SEC-C motif TPE_RS10695 PF07516 SecA Wing and Scaffold domain TPE_RS10700 PF09820 Predicted AAA-ATPase TPE_RS10700 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS10710 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS10735 PF08668 HDOD domain TPE_RS10745 PF13545 Crp-like helix-turn-helix domain TPE_RS10745 PF00027 Cyclic nucleotide-binding domain TPE_RS10750 PF01252 Signal peptidase (SPase) II TPE_RS10755 PF02424 ApbE family TPE_RS10760 PF05958 tRNA (Uracil-5-)-methyltransferase TPE_RS10800 PF03781 Sulfatase-modifying factor enzyme 1 TPE_RS10805 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS10805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TPE_RS10810 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TPE_RS10810 PF00037 4Fe-4S binding domain TPE_RS10810 PF02256 Iron hydrogenase small subunit TPE_RS10810 PF02906 Iron only hydrogenase large subunit, C-terminal domain TPE_RS10815 PF00919 Uncharacterized protein family UPF0004 TPE_RS10815 PF01938 TRAM domain TPE_RS10815 PF04055 Radical SAM superfamily TPE_RS10820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TPE_RS10820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TPE_RS10825 PF01891 Cobalt uptake substrate-specific transmembrane region TPE_RS10835 PF01008 Initiation factor 2 subunit family TPE_RS10855 PF00118 TCP-1/cpn60 chaperonin family TPE_RS10865 PF07009 NusG domain II TPE_RS10870 PF12704 MacB-like periplasmic core domain TPE_RS10870 PF02687 FtsX-like permease family TPE_RS10870 PF00005 ABC transporter TPE_RS10875 PF01136 Peptidase family U32 TPE_RS10875 PF16325 Peptidase family U32 C-terminal domain TPE_RS10880 PF07859 alpha/beta hydrolase fold TPE_RS10885 PF00664 ABC transporter transmembrane region TPE_RS10885 PF00005 ABC transporter TPE_RS10900 PF09820 Predicted AAA-ATPase TPE_RS10900 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS10910 PF00005 ABC transporter TPE_RS10925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TPE_RS10930 PF06745 KaiC TPE_RS10930 PF18073 Rubredoxin metal binding domain TPE_RS10955 PF13361 UvrD-like helicase C-terminal domain TPE_RS10955 PF00580 UvrD/REP helicase N-terminal domain TPE_RS10960 PF03129 Anticodon binding domain TPE_RS10960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TPE_RS10960 PF02824 TGS domain TPE_RS10960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TPE_RS10980 PF00005 ABC transporter TPE_RS10985 PF02355 Protein export membrane protein TPE_RS10990 PF02355 Protein export membrane protein TPE_RS10995 PF02699 Preprotein translocase subunit TPE_RS11000 PF01783 Ribosomal L32p protein family TPE_RS11005 PF00550 Phosphopantetheine attachment site TPE_RS11010 PF00035 Double-stranded RNA binding motif TPE_RS11010 PF14622 Ribonuclease-III-like TPE_RS11015 PF00270 DEAD/DEAH box helicase TPE_RS11015 PF00271 Helicase conserved C-terminal domain TPE_RS11015 PF18074 Primosomal protein N C-terminal domain TPE_RS11015 PF17764 3′ DNA-binding domain (3′BD) TPE_RS11015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TPE_RS11020 PF03167 Uracil DNA glycosylase superfamily TPE_RS11030 PF00579 tRNA synthetases class I (W and Y) TPE_RS11035 PF05191 Adenylate kinase, active site lid TPE_RS11055 PF01551 Peptidase family M23 TPE_RS11055 PF04225 Opacity-associated protein A LysM-like domain TPE_RS11065 PF00672 HAMP domain TPE_RS11065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS11065 PF02743 Cache domain TPE_RS11075 PF12733 Cadherin-like beta sandwich domain TPE_RS11075 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TPE_RS11090 PF00271 Helicase conserved C-terminal domain TPE_RS11090 PF02151 UvrB/uvrC motif TPE_RS11090 PF04851 Type III restriction enzyme, res subunit TPE_RS11090 PF12344 Ultra-violet resistance protein B TPE_RS11090 PF17757 UvrB interaction domain TPE_RS11095 PF01197 Ribosomal protein L31 TPE_RS11110 PF00206 Lyase TPE_RS11110 PF10415 Fumarase C C-terminus TPE_RS11115 PF09820 Predicted AAA-ATPase TPE_RS11115 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS11120 PF03461 TRCF domain TPE_RS11120 PF17757 UvrB interaction domain TPE_RS11120 PF00271 Helicase conserved C-terminal domain TPE_RS11120 PF02559 CarD-like/TRCF domain TPE_RS11120 PF00270 DEAD/DEAH box helicase TPE_RS11130 PF01370 NAD dependent epimerase/dehydratase family TPE_RS11135 PF00403 Heavy-metal-associated domain TPE_RS11140 PF01022 Bacterial regulatory protein, arsR family TPE_RS11145 PF07238 PilZ domain TPE_RS11155 PF00005 ABC transporter TPE_RS11160 PF00588 SpoU rRNA Methylase family TPE_RS11165 PF11849 Domain of unknown function (DUF3369) TPE_RS11170 PF12390 Selenocysteine synthase N terminal TPE_RS11170 PF03841 L-seryl-tRNA selenium transferase TPE_RS11175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TPE_RS11175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TPE_RS11185 PF04002 RadC-like JAB domain TPE_RS11185 PF12826 Helix-hairpin-helix motif TPE_RS11195 PF00578 AhpC/TSA family TPE_RS11200 PF12801 4Fe-4S binding domain TPE_RS11200 PF04205 FMN-binding domain TPE_RS11205 PF00005 ABC transporter TPE_RS11205 PF00664 ABC transporter transmembrane region TPE_RS11235 PF03033 Glycosyltransferase family 28 N-terminal domain TPE_RS11235 PF04101 Glycosyltransferase family 28 C-terminal domain TPE_RS11245 PF00440 Bacterial regulatory proteins, tetR family TPE_RS11245 PF08361 MAATS-type transcriptional repressor, C-terminal region TPE_RS11250 PF04954 Siderophore-interacting protein TPE_RS11250 PF08021 Siderophore-interacting FAD-binding domain TPE_RS11250 PF00005 ABC transporter TPE_RS11250 PF00664 ABC transporter transmembrane region TPE_RS11255 PF00664 ABC transporter transmembrane region TPE_RS11255 PF00005 ABC transporter TPE_RS11280 PF00583 Acetyltransferase (GNAT) family TPE_RS11395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TPE_RS11445 PF00849 RNA pseudouridylate synthase TPE_RS11445 PF01479 S4 domain TPE_RS11460 PF13237 4Fe-4S dicluster domain TPE_RS11460 PF10531 SLBB domain TPE_RS11460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TPE_RS11460 PF13375 RnfC Barrel sandwich hybrid domain TPE_RS11490 PF02245 Methylpurine-DNA glycosylase (MPG) TPE_RS11510 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS11515 PF00005 ABC transporter TPE_RS11515 PF17912 MalK OB fold domain TPE_RS11515 PF03459 TOBE domain TPE_RS11520 PF02446 4-alpha-glucanotransferase TPE_RS11525 PF00005 ABC transporter TPE_RS11530 PF00005 ABC transporter TPE_RS11535 PF17384 RimP C-terminal SH3 domain TPE_RS11535 PF02576 RimP N-terminal domain TPE_RS11540 PF13184 NusA-like KH domain TPE_RS11540 PF08529 NusA N-terminal domain TPE_RS11540 PF00575 S1 RNA binding domain TPE_RS11545 PF00009 Elongation factor Tu GTP binding domain TPE_RS11545 PF11987 Translation-initiation factor 2 TPE_RS11545 PF04760 Translation initiation factor IF-2, N-terminal region TPE_RS11550 PF02033 Ribosome-binding factor A TPE_RS11555 PF01509 TruB family pseudouridylate synthase (N terminal domain) TPE_RS11570 PF02492 CobW/HypB/UreG, nucleotide-binding domain TPE_RS11575 PF00164 Ribosomal protein S12/S23 TPE_RS11580 PF00177 Ribosomal protein S7p/S5e TPE_RS11585 PF00877 NlpC/P60 family TPE_RS11590 PF13193 AMP-binding enzyme C-terminal domain TPE_RS11590 PF00501 AMP-binding enzyme TPE_RS11635 PF00005 ABC transporter TPE_RS11640 PF12683 Protein of unknown function (DUF3798) TPE_RS11660 PF01784 NIF3 (NGG1p interacting factor 3) TPE_RS11665 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TPE_RS11665 PF02843 Phosphoribosylglycinamide synthetase, C domain TPE_RS11665 PF02844 Phosphoribosylglycinamide synthetase, N domain TPE_RS11670 PF02934 GatB/GatE catalytic domain TPE_RS11670 PF02637 GatB domain TPE_RS11675 PF00106 short chain dehydrogenase TPE_RS11680 PF02441 Flavoprotein TPE_RS11680 PF04127 DNA / pantothenate metabolism flavoprotein TPE_RS11700 PF04011 LemA family TPE_RS11705 PF01259 SAICAR synthetase TPE_RS11710 PF00731 AIR carboxylase TPE_RS11715 PF01636 Phosphotransferase enzyme family TPE_RS11750 PF00691 OmpA family TPE_RS11755 PF08239 Bacterial SH3 domain TPE_RS11755 PF00877 NlpC/P60 family TPE_RS11755 PF01476 LysM domain TPE_RS11770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS11770 PF00005 ABC transporter TPE_RS11775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TPE_RS11775 PF00005 ABC transporter TPE_RS11780 PF12911 N-terminal TM domain of oligopeptide transport permease C TPE_RS11780 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS11785 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS11795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain TPE_RS11795 PF00326 Prolyl oligopeptidase family TPE_RS11800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS11810 PF01467 Cytidylyltransferase-like TPE_RS11835 PF12626 Polymerase A arginine-rich C-terminus TPE_RS11835 PF12627 Probable RNA and SrmB- binding site of polymerase A TPE_RS11835 PF01743 Poly A polymerase head domain TPE_RS11860 PF01966 HD domain TPE_RS11880 PF02386 Cation transport protein TPE_RS11885 PF02254 TrkA-N domain TPE_RS11885 PF02080 TrkA-C domain TPE_RS11910 PF00842 Alanine racemase, C-terminal domain TPE_RS11910 PF01168 Alanine racemase, N-terminal domain TPE_RS11915 PF02401 LytB protein TPE_RS11925 PF05198 Translation initiation factor IF-3, N-terminal domain TPE_RS11925 PF00707 Translation initiation factor IF-3, C-terminal domain TPE_RS11930 PF01632 Ribosomal protein L35 TPE_RS11935 PF00453 Ribosomal protein L20 TPE_RS11945 PF05164 Cell division protein ZapA TPE_RS11950 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TPE_RS11960 PF00005 ABC transporter TPE_RS11965 PF00005 ABC transporter TPE_RS11970 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS11975 PF00528 Binding-protein-dependent transport system inner membrane component TPE_RS11980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TPE_RS11985 PF13673 Acetyltransferase (GNAT) domain TPE_RS11990 PF00672 HAMP domain TPE_RS11990 PF02743 Cache domain TPE_RS11990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS11995 PF02743 Cache domain TPE_RS11995 PF00672 HAMP domain TPE_RS11995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS12005 PF02719 Polysaccharide biosynthesis protein TPE_RS12020 PF01245 Ribosomal protein L19 TPE_RS12025 PF01746 tRNA (Guanine-1)-methyltransferase TPE_RS12030 PF01782 RimM N-terminal domain TPE_RS12040 PF00886 Ribosomal protein S16 TPE_RS12045 PF02896 PEP-utilising enzyme, TIM barrel domain TPE_RS12045 PF05524 PEP-utilising enzyme, N-terminal TPE_RS12045 PF00391 PEP-utilising enzyme, mobile domain TPE_RS12055 PF01926 50S ribosome-binding GTPase TPE_RS12055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TPE_RS12060 PF01554 MatE TPE_RS12065 PF00440 Bacterial regulatory proteins, tetR family TPE_RS12065 PF17922 Tetracyclin repressor-like, C-terminal domain TPE_RS12075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TPE_RS12075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TPE_RS12075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TPE_RS12075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TPE_RS12080 PF02308 MgtC family TPE_RS12100 PF00005 ABC transporter TPE_RS12105 PF00905 Penicillin binding protein transpeptidase domain TPE_RS12105 PF00912 Transglycosylase TPE_RS12105 PF06832 Penicillin-Binding Protein C-terminus Family TPE_RS12110 PF05362 Lon protease (S16) C-terminal proteolytic domain TPE_RS12110 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS12110 PF02190 ATP-dependent protease La (LON) substrate-binding domain TPE_RS12125 PF01026 TatD related DNase TPE_RS12135 PF00586 AIR synthase related protein, N-terminal domain TPE_RS12135 PF02769 AIR synthase related protein, C-terminal domain TPE_RS12140 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain TPE_RS12140 PF00207 Alpha-2-macroglobulin family TPE_RS12140 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain TPE_RS12140 PF11974 Bacterial alpha-2-macroglobulin MG3 domain TPE_RS12140 PF01835 MG2 domain TPE_RS12140 PF17962 Bacterial macroglobulin domain 6 TPE_RS12140 PF07703 Alpha-2-macroglobulin bait region domain TPE_RS12150 PF02674 Colicin V production protein TPE_RS12155 PF09115 DNA polymerase III, delta subunit, C terminal TPE_RS12160 PF00989 PAS fold TPE_RS12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_RS12160 PF00512 His Kinase A (phospho-acceptor) domain TPE_RS12160 PF13188 PAS domain TPE_RS12160 PF13426 PAS domain TPE_RS12165 PF10417 C-terminal domain of 1-Cys peroxiredoxin TPE_RS12165 PF00578 AhpC/TSA family TPE_RS12170 PF03372 Endonuclease/Exonuclease/phosphatase family TPE_RS12175 PF00557 Metallopeptidase family M24 TPE_RS12180 PF00684 DnaJ central domain TPE_RS12180 PF01556 DnaJ C terminal domain TPE_RS12180 PF00226 DnaJ domain TPE_RS12195 PF00672 HAMP domain TPE_RS12195 PF00211 Adenylate and Guanylate cyclase catalytic domain TPE_RS12200 PF01973 Protein of unknown function DUF115 TPE_RS12235 PF02653 Branched-chain amino acid transport system / permease component TPE_RS12240 PF00830 Ribosomal L28 family TPE_RS12255 PF03193 RsgA GTPase TPE_RS12265 PF00005 ABC transporter TPE_RS12270 PF01032 FecCD transport family TPE_RS12280 PF00664 ABC transporter transmembrane region TPE_RS12280 PF00005 ABC transporter TPE_RS12295 PF00005 ABC transporter TPE_RS12295 PF00664 ABC transporter transmembrane region TPE_RS12300 PF00664 ABC transporter transmembrane region TPE_RS12300 PF00005 ABC transporter TPE_RS12310 PF01196 Ribosomal protein L17 TPE_RS12315 PF01000 RNA polymerase Rpb3/RpoA insert domain TPE_RS12315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TPE_RS12315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TPE_RS12320 PF00411 Ribosomal protein S11 TPE_RS12325 PF00416 Ribosomal protein S13/S18 TPE_RS12330 PF00344 SecY translocase TPE_RS12335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TPE_RS12340 PF00327 Ribosomal protein L30p/L7e TPE_RS12345 PF03719 Ribosomal protein S5, C-terminal domain TPE_RS12345 PF00333 Ribosomal protein S5, N-terminal domain TPE_RS12350 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TPE_RS12355 PF00347 Ribosomal protein L6 TPE_RS12360 PF00410 Ribosomal protein S8 TPE_RS12365 PF00673 ribosomal L5P family C-terminus TPE_RS12365 PF00281 Ribosomal protein L5 TPE_RS12370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TPE_RS12370 PF00467 KOW motif TPE_RS12375 PF00238 Ribosomal protein L14p/L23e TPE_RS12380 PF00366 Ribosomal protein S17 TPE_RS12385 PF00831 Ribosomal L29 protein TPE_RS12390 PF00252 Ribosomal protein L16p/L10e TPE_RS12395 PF07650 KH domain TPE_RS12395 PF00189 Ribosomal protein S3, C-terminal domain TPE_RS12400 PF00237 Ribosomal protein L22p/L17e TPE_RS12405 PF00203 Ribosomal protein S19 TPE_RS12410 PF00181 Ribosomal Proteins L2, RNA binding domain TPE_RS12410 PF03947 Ribosomal Proteins L2, C-terminal domain TPE_RS12415 PF00276 Ribosomal protein L23 TPE_RS12420 PF00573 Ribosomal protein L4/L1 family TPE_RS12425 PF00297 Ribosomal protein L3 TPE_RS12430 PF00338 Ribosomal protein S10p/S20e TPE_RS12435 PF03143 Elongation factor Tu C-terminal domain TPE_RS12435 PF00009 Elongation factor Tu GTP binding domain TPE_RS12435 PF03144 Elongation factor Tu domain 2 TPE_RS12445 PF07726 ATPase family associated with various cellular activities (AAA) TPE_RS12445 PF17863 AAA lid domain TPE_RS12450 PF02511 Thymidylate synthase complementing protein TPE_RS12480 PF01434 Peptidase family M41 TPE_RS12480 PF17862 AAA+ lid domain TPE_RS12480 PF00004 ATPase family associated with various cellular activities (AAA) TPE_RS12495 PF02743 Cache domain TPE_RS12495 PF00672 HAMP domain TPE_RS12495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS12510 PF07859 alpha/beta hydrolase fold TPE_RS12510 PF00934 PE family TPE_RS12530 PF00270 DEAD/DEAH box helicase TPE_RS12530 PF13749 Putative ATP-dependent DNA helicase recG C-terminal TPE_RS12530 PF17191 RecG wedge domain TPE_RS12560 PF00005 ABC transporter TPE_RS12560 PF12848 ABC transporter TPE_RS12575 PF07992 Pyridine nucleotide-disulphide oxidoreductase TPE_RS12575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TPE_RS12585 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TPE_RS12585 PF12733 Cadherin-like beta sandwich domain TPE_RS12600 PF09820 Predicted AAA-ATPase TPE_RS12600 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS12615 PF08279 HTH domain TPE_RS12615 PF13280 WYL domain TPE_RS12630 PF12833 Helix-turn-helix domain TPE_RS12630 PF06445 GyrI-like small molecule binding domain TPE_RS12650 PF00890 FAD binding domain TPE_RS12650 PF04205 FMN-binding domain TPE_RS12655 PF00005 ABC transporter TPE_RS12660 PF01032 FecCD transport family TPE_RS12665 PF01032 FecCD transport family TPE_RS12670 PF01497 Periplasmic binding protein TPE_RS12690 PF17392 Urocanase C-terminal domain TPE_RS12690 PF01175 Urocanase Rossmann-like domain TPE_RS12690 PF17391 Urocanase N-terminal domain TPE_RS12715 PF09820 Predicted AAA-ATPase TPE_RS12715 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS12720 PF13654 AAA domain TPE_RS12720 PF05362 Lon protease (S16) C-terminal proteolytic domain TPE_RS12730 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS12730 PF08448 PAS fold TPE_RS12735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TPE_RS12740 PF05175 Methyltransferase small domain TPE_RS12750 PF00365 Phosphofructokinase TPE_RS12755 PF02132 RecR protein TPE_RS12755 PF13662 Toprim domain TPE_RS12760 PF02575 YbaB/EbfC DNA-binding family TPE_RS12765 PF02769 AIR synthase related protein, C-terminal domain TPE_RS12765 PF00586 AIR synthase related protein, N-terminal domain TPE_RS12765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TPE_RS12785 PF00121 Triosephosphate isomerase TPE_RS12790 PF16363 GDP-mannose 4,6 dehydratase TPE_RS12795 PF02773 S-adenosylmethionine synthetase, C-terminal domain TPE_RS12795 PF02772 S-adenosylmethionine synthetase, central domain TPE_RS12795 PF00438 S-adenosylmethionine synthetase, N-terminal domain TPE_RS12800 PF08011 PD-(D/E)XK nuclease superfamily TPE_RS12800 PF09820 Predicted AAA-ATPase TPE_RS12805 PF01554 MatE TPE_RS12810 PF02911 Formyl transferase, C-terminal domain TPE_RS12810 PF00551 Formyl transferase TPE_RS12815 PF01327 Polypeptide deformylase TPE_RS12820 PF00300 Histidine phosphatase superfamily (branch 1) TPE_RS12830 PF03793 PASTA domain TPE_RS12840 PF00772 DnaB-like helicase N terminal domain TPE_RS12840 PF03796 DnaB-like helicase C terminal domain TPE_RS12855 PF00488 MutS domain V TPE_RS12855 PF01713 Smr domain TPE_RS12870 PF07584 Aerotolerance regulator N-terminal TPE_RS12870 PF00092 von Willebrand factor type A domain TPE_RS12875 PF00092 von Willebrand factor type A domain TPE_RS12885 PF01882 Protein of unknown function DUF58 TPE_RS12895 PF17131 Outer membrane lipoprotein-sorting protein TPE_RS12905 PF00440 Bacterial regulatory proteins, tetR family TPE_RS12915 PF00950 ABC 3 transport family TPE_RS12920 PF00950 ABC 3 transport family TPE_RS12925 PF00005 ABC transporter TPE_RS12930 PF01297 Zinc-uptake complex component A periplasmic TPE_RS12965 PF02146 Sir2 family TPE_RS12970 PF01381 Helix-turn-helix TPE_RS12980 PF03186 CobD/Cbib protein TPE_RS12985 PF00365 Phosphofructokinase TPE_RS12995 PF00986 DNA gyrase B subunit, carboxyl terminus TPE_RS12995 PF00204 DNA gyrase B TPE_RS12995 PF01751 Toprim domain TPE_RS12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_RS13005 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TPE_RS13015 PF14804 Jag N-terminus TPE_RS13015 PF01424 R3H domain TPE_RS13020 PF14849 YidC periplasmic domain TPE_RS13020 PF02096 60Kd inner membrane protein TPE_RS13025 PF01809 Putative membrane protein insertion efficiency factor TPE_RS13035 PF00468 Ribosomal protein L34 TPE_RS13040 PF07670 Nucleoside recognition TPE_RS13045 PF01048 Phosphorylase superfamily TPE_RS13075 PF17158 Membrane-associated sensor, integral membrane domain TPE_RS13075 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS13080 PF00990 Diguanylate cyclase, GGDEF domain TPE_RS13080 PF00563 EAL domain TPE_RS13080 PF03707 Bacterial signalling protein N terminal repeat TPE_RS13100 PF12706 Beta-lactamase superfamily domain TPE_RS13100 PF00753 Metallo-beta-lactamase superfamily TPE_RS13105 PF01706 FliG C-terminal domain TPE_RS13105 PF14841 FliG middle domain TPE_RS13105 PF14842 FliG N-terminal domain TPE_RS13110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TPE_RS13110 PF00460 Flagella basal body rod protein TPE_RS13115 PF10135 Rod binding protein TPE_RS13120 PF01565 FAD binding domain TPE_RS13120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TPE_RS13165 PF00005 ABC transporter TPE_RS13170 PF00271 Helicase conserved C-terminal domain TPE_RS13170 PF09382 RQC domain TPE_RS13170 PF16124 RecQ zinc-binding TPE_RS13170 PF00570 HRDC domain TPE_RS13170 PF00270 DEAD/DEAH box helicase TPE_RS13175 PF00986 DNA gyrase B subunit, carboxyl terminus TPE_RS13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TPE_RS13175 PF01751 Toprim domain TPE_RS13175 PF00204 DNA gyrase B TPE_RS13225 PF02743 Cache domain TPE_RS13225 PF00672 HAMP domain TPE_RS13225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TPE_RS13260 PF18070 CRISPR-Cas9 PI domain TPE_RS13260 PF18061 CRISPR-Cas9 WED domain TPE_RS13260 PF13395 HNH endonuclease TPE_RS13260 PF18470 Cas9 alpha-helical lobe domain TPE_RS13260 PF18541 RuvC endonuclease subdomain 3 TPE_RS13325 PF14220 Domain of unknown function (DUF4329) TPE_RS13325 PF03527 RHS protein TPE_RS13325 PF05593 RHS Repeat TPE_RS13330 PF13847 Methyltransferase domain TPE_RS13425 PF00005 ABC transporter TPE_RS13430 PF00005 ABC transporter TPE_RS13435 PF03330 Lytic transglycolase