TREPR_RS00010 PF00308 Bacterial dnaA protein TREPR_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix TREPR_RS00010 PF11638 DnaA N-terminal domain TREPR_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain TREPR_RS00015 PF02767 DNA polymerase III beta subunit, central domain TREPR_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain TREPR_RS00020 PF02463 RecF/RecN/SMC N terminal domain TREPR_RS00025 PF05258 TREPR_RS00025 TREPR_RS00030 PF13036 Protein of unknown function (DUF3897) TREPR_RS00040 PF04452 RNA methyltransferase TREPR_RS00045 PF00005 ABC transporter TREPR_RS00050 PF02653 TREPR_RS00050 TREPR_RS00055 PF13407 Periplasmic binding protein domain TREPR_RS00060 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS00060 PF13377 Periplasmic binding protein-like domain TREPR_RS00065 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS00065 PF14821 Threonine synthase N terminus TREPR_RS00070 PF00924 Mechanosensitive ion channel TREPR_RS00075 PF00490 Delta-aminolevulinic acid dehydratase TREPR_RS00080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREPR_RS00080 PF02602 Uroporphyrinogen-III synthase HemD TREPR_RS00085 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TREPR_RS00085 PF03900 Porphobilinogen deaminase, C-terminal domain TREPR_RS00090 PF13241 Putative NAD(P)-binding TREPR_RS00090 PF14824 Sirohaem biosynthesis protein central TREPR_RS00095 PF14464 Prokaryotic homologs of the JAB domain TREPR_RS00100 PF02597 ThiS family TREPR_RS00105 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS00110 PF13531 Bacterial extracellular solute-binding protein TREPR_RS00115 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00120 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00125 PF00005 ABC transporter TREPR_RS00130 PF01507 Phosphoadenosine phosphosulfate reductase family TREPR_RS00135 PF01507 Phosphoadenosine phosphosulfate reductase family TREPR_RS00140 PF00009 Elongation factor Tu GTP binding domain TREPR_RS00145 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREPR_RS00150 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS00155 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS00160 PF00899 ThiF family TREPR_RS00165 PF01206 Sulfurtransferase TusA TREPR_RS00170 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TREPR_RS00170 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TREPR_RS00170 PF13187 4Fe-4S dicluster domain TREPR_RS00175 PF01966 HD domain TREPR_RS00180 PF00128 Alpha amylase, catalytic domain TREPR_RS00185 PF02446 4-alpha-glucanotransferase TREPR_RS00190 PF07556 TREPR_RS00190 TREPR_RS00200 PF01988 TREPR_RS00200 TREPR_RS00205 PF02653 TREPR_RS00205 TREPR_RS00210 PF02653 TREPR_RS00210 TREPR_RS00215 PF00005 ABC transporter TREPR_RS00220 PF02608 Basic membrane protein TREPR_RS00225 PF00578 AhpC/TSA family TREPR_RS00230 PF02683 TREPR_RS00230 TREPR_RS00235 PF01053 Cys/Met metabolism PLP-dependent enzyme TREPR_RS00245 PF00206 Lyase TREPR_RS00250 PF00478 IMP dehydrogenase / GMP reductase domain TREPR_RS00250 PF00571 CBS domain TREPR_RS00255 PF06445 GyrI-like small molecule binding domain TREPR_RS00260 PF12681 Glyoxalase-like domain TREPR_RS00265 PF02446 4-alpha-glucanotransferase TREPR_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00275 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00280 PF13416 Bacterial extracellular solute-binding protein TREPR_RS00285 PF00709 Adenylosuccinate synthetase TREPR_RS00290 PF00117 Glutamine amidotransferase class-I TREPR_RS00290 PF00733 Asparagine synthase TREPR_RS00290 PF00958 GMP synthase C terminal domain TREPR_RS00300 PF01850 PIN domain TREPR_RS00305 PF08843 Nucleotidyl transferase of unknown function (DUF1814) TREPR_RS00315 PF04014 Antidote-toxin recognition MazE TREPR_RS00320 PF01850 PIN domain TREPR_RS00325 PF16363 TREPR_RS00325 TREPR_RS00335 PF05050 Methyltransferase FkbM domain TREPR_RS00345 PF00535 Glycosyl transferase family 2 TREPR_RS00350 PF04321 RmlD substrate binding domain TREPR_RS00355 PF14897 TREPR_RS00355 TREPR_RS00360 PF13692 Glycosyl transferases group 1 TREPR_RS00375 PF00534 Glycosyl transferases group 1 TREPR_RS00380 PF00535 Glycosyl transferase family 2 TREPR_RS00385 PF02706 Chain length determinant protein TREPR_RS00390 PF10531 SLBB domain TREPR_RS00395 PF08241 Methyltransferase domain TREPR_RS00400 PF00884 Sulfatase TREPR_RS00405 PF01850 PIN domain TREPR_RS00410 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS00415 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS00420 PF13470 TREPR_RS00420 TREPR_RS00425 PF13458 Periplasmic binding protein TREPR_RS00430 PF00990 GGDEF domain TREPR_RS00435 PF00072 Response regulator receiver domain TREPR_RS00435 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS00435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS00440 PF00293 NUDIX domain TREPR_RS00445 PF13279 Thioesterase-like superfamily TREPR_RS00450 PF01841 Transglutaminase-like superfamily TREPR_RS00455 PF01882 TREPR_RS00455 TREPR_RS00460 PF07726 ATPase family associated with various cellular activities (AAA) TREPR_RS00470 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel TREPR_RS00475 PF00501 AMP-binding enzyme TREPR_RS00485 PF01546 Peptidase family M20/M25/M40 TREPR_RS00485 PF07687 Peptidase dimerisation domain TREPR_RS00490 PF00005 ABC transporter TREPR_RS00495 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00500 PF09084 NMT1/THI5 like TREPR_RS00515 PF02452 PemK-like protein TREPR_RS00520 PF00814 Glycoprotease family TREPR_RS00530 PF00140 Sigma-70 factor, region 1 TREPR_RS00530 PF04539 Sigma-70 region 3 TREPR_RS00530 PF04542 Sigma-70 region 2 TREPR_RS00530 PF04545 Sigma-70, region 4 TREPR_RS00535 PF00072 Response regulator receiver domain TREPR_RS00535 PF00158 Sigma-54 interaction domain TREPR_RS00535 PF02954 Bacterial regulatory protein, Fis family TREPR_RS00540 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS00555 PF07883 Cupin domain TREPR_RS00555 PF12844 Helix-turn-helix domain TREPR_RS00560 PF00501 AMP-binding enzyme TREPR_RS00560 PF13193 AMP-binding enzyme C-terminal domain TREPR_RS00565 PF13263 PHP-associated TREPR_RS00570 PF03807 NADP oxidoreductase coenzyme F420-dependent TREPR_RS00570 PF14748 Pyrroline-5-carboxylate reductase dimerisation TREPR_RS00580 PF13146 TREPR_RS00580 TREPR_RS00590 PF04102 SlyX TREPR_RS00595 PF00696 Amino acid kinase family TREPR_RS00600 PF00171 Aldehyde dehydrogenase family TREPR_RS00610 PF13527 Acetyltransferase (GNAT) domain TREPR_RS00615 PF00570 HRDC domain TREPR_RS00615 PF01612 3'-5' exonuclease TREPR_RS00620 PF03576 Peptidase family S58 TREPR_RS00625 PF02441 Flavoprotein TREPR_RS00630 PF04127 DNA / pantothenate metabolism flavoprotein TREPR_RS00635 PF01522 Polysaccharide deacetylase TREPR_RS00640 PF00583 Acetyltransferase (GNAT) family TREPR_RS00655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREPR_RS00655 PF03129 Anticodon binding domain TREPR_RS00655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_RS00660 PF00881 Nitroreductase family TREPR_RS00665 PF00107 Zinc-binding dehydrogenase TREPR_RS00665 PF08240 Alcohol dehydrogenase GroES-like domain TREPR_RS00670 PF13561 Enoyl-(Acyl carrier protein) reductase TREPR_RS00675 PF00455 TREPR_RS00675 TREPR_RS00675 PF08220 DeoR-like helix-turn-helix domain TREPR_RS00680 PF00455 TREPR_RS00680 TREPR_RS00680 PF08220 DeoR-like helix-turn-helix domain TREPR_RS00685 PF13180 PDZ domain TREPR_RS00685 PF13365 Trypsin-like peptidase domain TREPR_RS00690 PF01545 Cation efflux family TREPR_RS00690 PF16916 TREPR_RS00690 TREPR_RS00700 PF00436 Single-strand binding protein family TREPR_RS00710 PF01136 TREPR_RS00710 TREPR_RS00715 PF13519 von Willebrand factor type A domain TREPR_RS00715 PF13768 von Willebrand factor type A domain TREPR_RS00720 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS00725 PF00809 Pterin binding enzyme TREPR_RS00725 PF02310 B12 binding domain TREPR_RS00725 PF02574 Homocysteine S-methyltransferase TREPR_RS00725 PF02607 B12 binding domain TREPR_RS00725 PF02965 Vitamin B12 dependent methionine synthase, activation domain TREPR_RS00730 PF01554 MatE TREPR_RS00735 PF01547 Bacterial extracellular solute-binding protein TREPR_RS00740 PF01202 Shikimate kinase TREPR_RS00745 PF13367 TREPR_RS00745 TREPR_RS00755 PF13539 D-alanyl-D-alanine carboxypeptidase TREPR_RS00770 PF04773 FecR protein TREPR_RS00780 PF02463 RecF/RecN/SMC N terminal domain TREPR_RS00785 PF00005 ABC transporter TREPR_RS00785 PF08402 TOBE domain TREPR_RS00795 PF01066 CDP-alcohol phosphatidyltransferase TREPR_RS00810 PF03050 TREPR_RS00810 TREPR_RS00815 PF12784 TREPR_RS00815 TREPR_RS00820 PF04754 TREPR_RS00820 TREPR_RS00855 PF08902 TREPR_RS00855 TREPR_RS00860 PF03009 Glycerophosphoryl diester phosphodiesterase family TREPR_RS00865 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00870 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS00875 PF00005 ABC transporter TREPR_RS00875 PF08402 TOBE domain TREPR_RS00880 PF13416 Bacterial extracellular solute-binding protein TREPR_RS00885 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS00885 PF13407 Periplasmic binding protein domain TREPR_RS00890 PF04015 TREPR_RS00890 TREPR_RS00900 PF00072 Response regulator receiver domain TREPR_RS00900 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS00900 PF01590 GAF domain TREPR_RS00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS00900 PF02743 Cache domain TREPR_RS00905 PF16561 TREPR_RS00905 TREPR_RS00925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TREPR_RS00945 PF04012 TREPR_RS00945 TREPR_RS00955 PF01740 STAS domain TREPR_RS00960 PF00588 SpoU rRNA Methylase family TREPR_RS00965 PF03808 TREPR_RS00965 TREPR_RS00970 PF04452 RNA methyltransferase TREPR_RS00975 PF00595 PDZ domain (Also known as DHR or GLGF) TREPR_RS00975 PF03572 Peptidase family S41 TREPR_RS00985 PF12850 Calcineurin-like phosphoesterase superfamily domain TREPR_RS00990 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS00995 PF13200 TREPR_RS00995 TREPR_RS01005 PF13519 von Willebrand factor type A domain TREPR_RS01015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS01015 PF00672 HAMP domain TREPR_RS01020 PF13539 D-alanyl-D-alanine carboxypeptidase TREPR_RS01025 PF13560 Helix-turn-helix domain TREPR_RS01030 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS01030 PF01434 Peptidase family M41 TREPR_RS01030 PF06480 FtsH Extracellular TREPR_RS01035 PF07523 Bacterial Ig-like domain (group 3) TREPR_RS01045 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS01070 PF00288 GHMP kinases N terminal domain TREPR_RS01070 PF10509 Galactokinase galactose-binding signature TREPR_RS01075 PF00817 impB/mucB/samB family TREPR_RS01075 PF11799 impB/mucB/samB family C-terminal domain TREPR_RS01095 PF01008 Initiation factor 2 subunit family TREPR_RS01100 PF00596 Class II Aldolase and Adducin N-terminal domain TREPR_RS01105 PF01048 Phosphorylase superfamily TREPR_RS01115 PF05050 Methyltransferase FkbM domain TREPR_RS01135 PF04488 Glycosyltransferase sugar-binding region containing DXD motif TREPR_RS01145 PF01040 UbiA prenyltransferase family TREPR_RS01150 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS01170 PF00534 Glycosyl transferases group 1 TREPR_RS01175 PF05711 Macrocin-O-methyltransferase (TylF) TREPR_RS01180 PF13692 Glycosyl transferases group 1 TREPR_RS01185 PF00535 Glycosyl transferase family 2 TREPR_RS01190 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS01195 PF02397 TREPR_RS01195 TREPR_RS01200 PF02719 Polysaccharide biosynthesis protein TREPR_RS01205 PF02706 Chain length determinant protein TREPR_RS01210 PF10531 SLBB domain TREPR_RS01215 PF03062 TREPR_RS01215 TREPR_RS01225 PF01757 TREPR_RS01225 TREPR_RS01235 PF00665 Integrase core domain TREPR_RS01240 PF00665 Integrase core domain TREPR_RS01245 PF01757 TREPR_RS01245 TREPR_RS01255 PF01548 TREPR_RS01255 TREPR_RS01255 PF02371 TREPR_RS01255 TREPR_RS01260 PF00892 EamA-like transporter family TREPR_RS01265 PF02310 B12 binding domain TREPR_RS01265 PF04055 Radical SAM superfamily TREPR_RS01280 PF00654 Voltage gated chloride channel TREPR_RS01285 PF00136 DNA polymerase family B TREPR_RS01285 PF03104 DNA polymerase family B, exonuclease domain TREPR_RS01290 PF13091 PLD-like domain TREPR_RS01290 PF13396 TREPR_RS01290 TREPR_RS01295 PF00583 Acetyltransferase (GNAT) family TREPR_RS01300 PF00933 Glycosyl hydrolase family 3 N terminal domain TREPR_RS01305 PF13280 TREPR_RS01305 TREPR_RS01310 PF01909 Nucleotidyltransferase domain TREPR_RS01315 PF05168 HEPN domain TREPR_RS01320 PF00929 Exonuclease TREPR_RS01325 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS01330 PF00771 FHIPEP family TREPR_RS01340 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS01345 PF00515 Tetratricopeptide repeat TREPR_RS01345 PF07719 Tetratricopeptide repeat TREPR_RS01345 PF13181 Tetratricopeptide repeat TREPR_RS01345 PF13414 TPR repeat TREPR_RS01345 PF13432 Tetratricopeptide repeat TREPR_RS01355 PF00515 Tetratricopeptide repeat TREPR_RS01355 PF13181 Tetratricopeptide repeat TREPR_RS01355 PF13414 TPR repeat TREPR_RS01355 PF13431 Tetratricopeptide repeat TREPR_RS01365 PF00515 Tetratricopeptide repeat TREPR_RS01365 PF13181 Tetratricopeptide repeat TREPR_RS01365 PF13414 TPR repeat TREPR_RS01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREPR_RS01405 PF02511 Thymidylate synthase complementing protein TREPR_RS01415 PF01636 Phosphotransferase enzyme family TREPR_RS01420 PF01547 Bacterial extracellular solute-binding protein TREPR_RS01425 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS01440 PF01790 TREPR_RS01440 TREPR_RS01445 PF01571 Aminomethyltransferase folate-binding domain TREPR_RS01445 PF08669 Glycine cleavage T-protein C-terminal barrel domain TREPR_RS01450 PF01597 Glycine cleavage H-protein TREPR_RS01455 PF02347 Glycine cleavage system P-protein TREPR_RS01460 PF02347 Glycine cleavage system P-protein TREPR_RS01465 PF03099 Biotin/lipoate A/B protein ligase family TREPR_RS01465 PF10437 Bacterial lipoate protein ligase C-terminus TREPR_RS01470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TREPR_RS01470 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREPR_RS01475 PF16481 TREPR_RS01475 TREPR_RS01485 PF01546 Peptidase family M20/M25/M40 TREPR_RS01485 PF07687 Peptidase dimerisation domain TREPR_RS01490 PF13187 4Fe-4S dicluster domain TREPR_RS01495 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS01510 PF01850 PIN domain TREPR_RS01525 PF01336 OB-fold nucleic acid binding domain TREPR_RS01525 PF02811 PHP domain TREPR_RS01525 PF07733 Bacterial DNA polymerase III alpha subunit TREPR_RS01525 PF14579 Helix-hairpin-helix motif TREPR_RS01530 PF02325 TREPR_RS01530 TREPR_RS01535 PF00270 DEAD/DEAH box helicase TREPR_RS01535 PF00271 Helicase conserved C-terminal domain TREPR_RS01535 PF17191 TREPR_RS01535 TREPR_RS01540 PF00140 Sigma-70 factor, region 1 TREPR_RS01540 PF04539 Sigma-70 region 3 TREPR_RS01540 PF04542 Sigma-70 region 2 TREPR_RS01540 PF04545 Sigma-70, region 4 TREPR_RS01545 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS01550 PF05036 Sporulation related domain TREPR_RS01555 PF00027 Cyclic nucleotide-binding domain TREPR_RS01560 PF00027 Cyclic nucleotide-binding domain TREPR_RS01560 PF13174 Tetratricopeptide repeat TREPR_RS01560 PF13181 Tetratricopeptide repeat TREPR_RS01565 PF02811 PHP domain TREPR_RS01575 PF01368 DHH family TREPR_RS01575 PF02272 DHHA1 domain TREPR_RS01585 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ TREPR_RS01595 PF03006 TREPR_RS01595 TREPR_RS01600 PF00005 ABC transporter TREPR_RS01600 PF12848 ABC transporter TREPR_RS01610 PF02629 CoA binding domain TREPR_RS01610 PF06971 Putative DNA-binding protein N-terminus TREPR_RS01615 PF00266 Aminotransferase class-V TREPR_RS01620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TREPR_RS01620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TREPR_RS01625 PF00258 Flavodoxin TREPR_RS01630 PF07690 Major Facilitator Superfamily TREPR_RS01635 PF07796 TREPR_RS01635 TREPR_RS01640 PF12705 PD-(D/E)XK nuclease superfamily TREPR_RS01645 PF00580 UvrD/REP helicase N-terminal domain TREPR_RS01645 PF12705 PD-(D/E)XK nuclease superfamily TREPR_RS01645 PF13361 UvrD-like helicase C-terminal domain TREPR_RS01650 PF00575 S1 RNA binding domain TREPR_RS01650 PF09371 Tex-like protein N-terminal domain TREPR_RS01650 PF12836 Helix-hairpin-helix motif TREPR_RS01650 PF16921 TREPR_RS01650 TREPR_RS01655 PF02527 rRNA small subunit methyltransferase G TREPR_RS01660 PF13084 TREPR_RS01660 TREPR_RS01665 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS01665 PF13305 WHG domain TREPR_RS01670 PF00753 Metallo-beta-lactamase superfamily TREPR_RS01675 PF12698 ABC-2 family transporter protein TREPR_RS01680 PF01554 MatE TREPR_RS01685 PF00731 AIR carboxylase TREPR_RS01690 PF01259 SAICAR synthetase TREPR_RS01695 PF00156 Phosphoribosyl transferase domain TREPR_RS01695 PF13537 Glutamine amidotransferase domain TREPR_RS01700 PF07883 Cupin domain TREPR_RS01705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREPR_RS01705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREPR_RS01710 PF01791 DeoC/LacD family aldolase TREPR_RS01715 PF00586 AIR synthase related protein, N-terminal domain TREPR_RS01715 PF02769 AIR synthase related protein, C-terminal domain TREPR_RS01720 PF00551 Formyl transferase TREPR_RS01725 PF00248 Aldo/keto reductase family TREPR_RS01725 PF13534 4Fe-4S dicluster domain TREPR_RS01730 PF01808 AICARFT/IMPCHase bienzyme TREPR_RS01730 PF02142 MGS-like domain TREPR_RS01735 PF04055 Radical SAM superfamily TREPR_RS01735 PF06968 Biotin and Thiamin Synthesis associated domain TREPR_RS01745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TREPR_RS01745 PF02843 Phosphoribosylglycinamide synthetase, C domain TREPR_RS01745 PF02844 Phosphoribosylglycinamide synthetase, N domain TREPR_RS01750 PF00583 Acetyltransferase (GNAT) family TREPR_RS01750 PF00696 Amino acid kinase family TREPR_RS01755 PF01814 Hemerythrin HHE cation binding domain TREPR_RS01760 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS01760 PF02190 ATP-dependent protease La (LON) domain TREPR_RS01760 PF05362 Lon protease (S16) C-terminal proteolytic domain TREPR_RS01770 PF01435 Peptidase family M48 TREPR_RS01775 PF13432 Tetratricopeptide repeat TREPR_RS01785 PF00037 4Fe-4S binding domain TREPR_RS01785 PF13187 4Fe-4S dicluster domain TREPR_RS01790 PF13673 Acetyltransferase (GNAT) domain TREPR_RS01795 PF01381 Helix-turn-helix TREPR_RS01800 PF07155 ECF-type riboflavin transporter, S component TREPR_RS01805 PF00005 ABC transporter TREPR_RS01805 PF12558 TREPR_RS01805 TREPR_RS01810 PF02361 Cobalt transport protein TREPR_RS01815 PF11230 TREPR_RS01815 TREPR_RS01820 PF04055 Radical SAM superfamily TREPR_RS01820 PF13353 4Fe-4S single cluster domain TREPR_RS01825 PF00294 pfkB family carbohydrate kinase TREPR_RS01830 PF04227 Indigoidine synthase A like protein TREPR_RS01835 PF01323 DSBA-like thioredoxin domain TREPR_RS01840 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS01855 PF00535 Glycosyl transferase family 2 TREPR_RS01860 PF14296 TREPR_RS01860 TREPR_RS01865 PF00534 Glycosyl transferases group 1 TREPR_RS01865 PF13439 Glycosyltransferase Family 4 TREPR_RS01870 PF00535 Glycosyl transferase family 2 TREPR_RS01875 PF00005 ABC transporter TREPR_RS01875 PF00664 ABC transporter transmembrane region TREPR_RS01880 PF01633 Choline/ethanolamine kinase TREPR_RS01890 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS01900 PF03269 TREPR_RS01900 TREPR_RS01905 PF01531 TREPR_RS01905 TREPR_RS01915 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS01920 PF00534 Glycosyl transferases group 1 TREPR_RS01920 PF13439 Glycosyltransferase Family 4 TREPR_RS01925 PF02706 Chain length determinant protein TREPR_RS01945 PF10531 SLBB domain TREPR_RS01955 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS01960 PF01850 PIN domain TREPR_RS01965 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS01975 PF00005 ABC transporter TREPR_RS01980 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS01985 PF00266 Aminotransferase class-V TREPR_RS01995 PF00581 Rhodanese-like domain TREPR_RS01995 PF00899 ThiF family TREPR_RS02000 PF02597 ThiS family TREPR_RS02005 PF14464 Prokaryotic homologs of the JAB domain TREPR_RS02010 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS02015 PF00557 Metallopeptidase family M24 TREPR_RS02015 PF01321 Creatinase/Prolidase N-terminal domain TREPR_RS02025 PF12637 TREPR_RS02025 TREPR_RS02030 PF03358 NADPH-dependent FMN reductase TREPR_RS02040 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS02045 PF00128 Alpha amylase, catalytic domain TREPR_RS02050 PF12146 Putative lysophospholipase TREPR_RS02055 PF01026 TatD related DNase TREPR_RS02070 PF01420 Type I restriction modification DNA specificity domain TREPR_RS02075 PF02384 N-6 DNA Methylase TREPR_RS02075 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TREPR_RS02080 PF00717 Peptidase S24-like TREPR_RS02080 PF01381 Helix-turn-helix TREPR_RS02105 PF12441 TREPR_RS02105 TREPR_RS02115 PF01850 PIN domain TREPR_RS02130 PF02627 Carboxymuconolactone decarboxylase family TREPR_RS02140 PF00857 Isochorismatase family TREPR_RS02150 PF01926 50S ribosome-binding GTPase TREPR_RS02155 PF00206 Lyase TREPR_RS02160 PF00571 CBS domain TREPR_RS02160 PF01769 Divalent cation transporter TREPR_RS02160 PF03448 MgtE intracellular N domain TREPR_RS02170 PF06968 Biotin and Thiamin Synthesis associated domain TREPR_RS02175 PF04055 Radical SAM superfamily TREPR_RS02180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS02185 PF08757 TREPR_RS02185 TREPR_RS02190 PF00005 ABC transporter TREPR_RS02190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS02195 PF00005 ABC transporter TREPR_RS02195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS02200 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS02200 PF12911 TREPR_RS02200 TREPR_RS02205 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS02225 PF13173 AAA domain TREPR_RS02225 PF13635 TREPR_RS02225 TREPR_RS02230 PF00691 OmpA family TREPR_RS02235 PF00156 Phosphoribosyl transferase domain TREPR_RS02235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TREPR_RS02240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREPR_RS02240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREPR_RS02245 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS02250 PF00781 Diacylglycerol kinase catalytic domain TREPR_RS02260 PF00515 Tetratricopeptide repeat TREPR_RS02260 PF13181 Tetratricopeptide repeat TREPR_RS02260 PF13414 TPR repeat TREPR_RS02270 PF03783 Curli production assembly/transport component CsgG TREPR_RS02285 PF01381 Helix-turn-helix TREPR_RS02290 PF16314 TREPR_RS02290 TREPR_RS02295 PF01554 MatE TREPR_RS02300 PF07670 Nucleoside recognition TREPR_RS02305 PF00152 tRNA synthetases class II (D, K and N) TREPR_RS02305 PF01336 OB-fold nucleic acid binding domain TREPR_RS02310 PF02637 GatB domain TREPR_RS02310 PF02934 GatB/GatE catalytic domain TREPR_RS02315 PF01425 Amidase TREPR_RS02325 PF04326 Divergent AAA domain TREPR_RS02325 PF13749 ATP-dependent DNA helicase recG C-terminal TREPR_RS02330 PF10387 Protein of unknown function (DUF2442) TREPR_RS02335 PF13711 TREPR_RS02335 TREPR_RS02345 PF01420 Type I restriction modification DNA specificity domain TREPR_RS02345 PF02384 N-6 DNA Methylase TREPR_RS02350 PF04851 Type III restriction enzyme, res subunit TREPR_RS02370 PF00533 BRCA1 C Terminus (BRCT) domain TREPR_RS02370 PF00929 Exonuclease TREPR_RS02375 PF00872 TREPR_RS02375 TREPR_RS02380 PF02627 Carboxymuconolactone decarboxylase family TREPR_RS02390 PF01497 Periplasmic binding protein TREPR_RS02395 PF00005 ABC transporter TREPR_RS02400 PF01032 FecCD transport family TREPR_RS02405 PF02321 Outer membrane efflux protein TREPR_RS02410 PF16576 TREPR_RS02410 TREPR_RS02415 PF00873 AcrB/AcrD/AcrF family TREPR_RS02420 PF00140 Sigma-70 factor, region 1 TREPR_RS02420 PF03979 Sigma-70 factor, region 1 TREPR_RS02420 PF04539 Sigma-70 region 3 TREPR_RS02420 PF04542 Sigma-70 region 2 TREPR_RS02420 PF04545 Sigma-70, region 4 TREPR_RS02440 PF00881 Nitroreductase family TREPR_RS02445 PF02915 Rubrerythrin TREPR_RS02450 PF01475 Ferric uptake regulator family TREPR_RS02455 PF01869 BadF/BadG/BcrA/BcrD ATPase family TREPR_RS02455 PF09989 TREPR_RS02455 TREPR_RS02460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS02460 PF07685 CobB/CobQ-like glutamine amidotransferase domain TREPR_RS02465 PF00107 Zinc-binding dehydrogenase TREPR_RS02465 PF08240 Alcohol dehydrogenase GroES-like domain TREPR_RS02470 PF01734 Patatin-like phospholipase TREPR_RS02475 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS02475 PF06426 Serine acetyltransferase, N-terminal TREPR_RS02480 PF00294 pfkB family carbohydrate kinase TREPR_RS02490 PF00515 Tetratricopeptide repeat TREPR_RS02495 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TREPR_RS02500 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TREPR_RS02500 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREPR_RS02500 PF10531 SLBB domain TREPR_RS02500 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_RS02500 PF12838 4Fe-4S dicluster domain TREPR_RS02505 PF02256 Iron hydrogenase small subunit TREPR_RS02505 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS02505 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_RS02505 PF13187 4Fe-4S dicluster domain TREPR_RS02505 PF13510 2Fe-2S iron-sulfur cluster binding domain TREPR_RS02510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREPR_RS02520 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS02520 PF05226 TREPR_RS02520 TREPR_RS02525 PF00072 Response regulator receiver domain TREPR_RS02525 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS02530 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS02535 PF04014 Antidote-toxin recognition MazE TREPR_RS02540 PF13470 TREPR_RS02540 TREPR_RS02550 PF02653 TREPR_RS02550 TREPR_RS02555 PF02653 TREPR_RS02555 TREPR_RS02560 PF00005 ABC transporter TREPR_RS02565 PF12683 Protein of unknown function (DUF3798) TREPR_RS02570 PF12683 Protein of unknown function (DUF3798) TREPR_RS02575 PF00579 tRNA synthetases class I (W and Y) TREPR_RS02585 PF13173 AAA domain TREPR_RS02585 PF13635 TREPR_RS02585 TREPR_RS02595 PF01554 MatE TREPR_RS02600 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS02605 PF13347 MFS/sugar transport protein TREPR_RS02610 PF00149 Calcineurin-like phosphoesterase TREPR_RS02610 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS02615 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TREPR_RS02620 PF03466 LysR substrate binding domain TREPR_RS02625 PF01037 AsnC family TREPR_RS02625 PF13412 Winged helix-turn-helix DNA-binding TREPR_RS02630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain TREPR_RS02630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain TREPR_RS02635 PF01235 TREPR_RS02635 TREPR_RS02640 PF02690 TREPR_RS02640 TREPR_RS02645 PF00753 Metallo-beta-lactamase superfamily TREPR_RS02655 PF06296 TREPR_RS02655 TREPR_RS02685 PF03880 DbpA RNA binding domain TREPR_RS02690 PF00583 Acetyltransferase (GNAT) family TREPR_RS02690 PF03682 TREPR_RS02690 TREPR_RS02695 PF00365 Phosphofructokinase TREPR_RS02705 PF10543 TREPR_RS02705 TREPR_RS02710 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS02715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS02720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS02725 PF13386 TREPR_RS02725 TREPR_RS02735 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS02740 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREPR_RS02745 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS02750 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS02760 PF00122 E1-E2 ATPase TREPR_RS02760 PF00702 haloacid dehalogenase-like hydrolase TREPR_RS02770 PF00892 EamA-like transporter family TREPR_RS02775 PF02653 TREPR_RS02775 TREPR_RS02780 PF02653 TREPR_RS02780 TREPR_RS02785 PF00005 ABC transporter TREPR_RS02790 PF02608 Basic membrane protein TREPR_RS02795 PF00149 Calcineurin-like phosphoesterase TREPR_RS02795 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS02805 PF01026 TatD related DNase TREPR_RS02815 PF00120 Glutamine synthetase, catalytic domain TREPR_RS02815 PF12437 Glutamine synthetase type III N terminal TREPR_RS02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS02820 PF07730 Histidine kinase TREPR_RS02840 PF00072 Response regulator receiver domain TREPR_RS02840 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS02850 PF03683 TREPR_RS02850 TREPR_RS02855 PF11848 TREPR_RS02855 TREPR_RS02865 PF00543 Nitrogen regulatory protein P-II TREPR_RS02870 PF00909 Ammonium Transporter Family TREPR_RS02875 PF00158 Sigma-54 interaction domain TREPR_RS02875 PF01590 GAF domain TREPR_RS02875 PF02954 Bacterial regulatory protein, Fis family TREPR_RS02880 PF10016 TREPR_RS02880 TREPR_RS02890 PF00085 Thioredoxin TREPR_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS02900 PF00005 ABC transporter TREPR_RS02905 PF00072 Response regulator receiver domain TREPR_RS02905 PF13487 HD domain TREPR_RS02910 PF00072 Response regulator receiver domain TREPR_RS02910 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS02910 PF16927 TREPR_RS02910 TREPR_RS02915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TREPR_RS02915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TREPR_RS02920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TREPR_RS02920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TREPR_RS02925 PF01979 Amidohydrolase family TREPR_RS02930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TREPR_RS02935 PF01180 Dihydroorotate dehydrogenase TREPR_RS02950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TREPR_RS02955 PF00892 EamA-like transporter family TREPR_RS02960 PF00857 Isochorismatase family TREPR_RS02965 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TREPR_RS02970 PF00485 Phosphoribulokinase / Uridine kinase family TREPR_RS02975 PF01637 Archaeal ATPase TREPR_RS02975 PF03008 TREPR_RS02975 TREPR_RS02980 PF00849 RNA pseudouridylate synthase TREPR_RS02990 PF01168 Alanine racemase, N-terminal domain TREPR_RS02995 PF00398 Ribosomal RNA adenine dimethylase TREPR_RS03000 PF03772 TREPR_RS03000 TREPR_RS03005 PF07238 PilZ domain TREPR_RS03010 PF02517 CAAX protease self-immunity TREPR_RS03015 PF10135 TREPR_RS03015 TREPR_RS03020 PF00460 Flagella basal body rod protein TREPR_RS03020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREPR_RS03025 PF00460 Flagella basal body rod protein TREPR_RS03025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREPR_RS03030 PF14076 TREPR_RS03030 TREPR_RS03040 PF01381 Helix-turn-helix TREPR_RS03050 PF02368 Bacterial Ig-like domain (group 2) TREPR_RS03060 PF00579 tRNA synthetases class I (W and Y) TREPR_RS03065 PF03023 TREPR_RS03065 TREPR_RS03070 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREPR_RS03070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TREPR_RS03075 PF00310 Glutamine amidotransferases class-II TREPR_RS03075 PF01493 GXGXG motif TREPR_RS03075 PF01645 Conserved region in glutamate synthase TREPR_RS03075 PF04898 Glutamate synthase central domain TREPR_RS03080 PF03063 Prismane/CO dehydrogenase family TREPR_RS03085 PF02086 D12 class N6 adenine-specific DNA methyltransferase TREPR_RS03095 PF01909 Nucleotidyltransferase domain TREPR_RS03100 PF00248 Aldo/keto reductase family TREPR_RS03100 PF13534 4Fe-4S dicluster domain TREPR_RS03110 PF00474 Sodium:solute symporter family TREPR_RS03130 PF02410 Oligomerisation domain TREPR_RS03135 PF03816 Cell envelope-related transcriptional attenuator domain TREPR_RS03135 PF13399 LytR cell envelope-related transcriptional attenuator TREPR_RS03140 PF01467 Cytidylyltransferase TREPR_RS03140 PF01966 HD domain TREPR_RS03145 PF01018 GTP1/OBG TREPR_RS03145 PF01926 50S ribosome-binding GTPase TREPR_RS03150 PF01016 Ribosomal L27 protein TREPR_RS03155 PF04327 Protein of unknown function (DUF464) TREPR_RS03160 PF00829 Ribosomal prokaryotic L21 protein TREPR_RS03165 PF00535 Glycosyl transferase family 2 TREPR_RS03170 PF01553 Acyltransferase TREPR_RS03175 PF01554 MatE TREPR_RS03180 PF00750 tRNA synthetases class I (R) TREPR_RS03180 PF03485 Arginyl tRNA synthetase N terminal domain TREPR_RS03180 PF05746 DALR anticodon binding domain TREPR_RS03185 PF02578 Multi-copper polyphenol oxidoreductase laccase TREPR_RS03205 PF13274 TREPR_RS03205 TREPR_RS03215 PF00877 NlpC/P60 family TREPR_RS03220 PF02678 Pirin TREPR_RS03225 PF00156 Phosphoribosyl transferase domain TREPR_RS03235 PF00072 Response regulator receiver domain TREPR_RS03235 PF00990 GGDEF domain TREPR_RS03240 PF03928 Domain of unknown function (DUF336) TREPR_RS03255 PF13470 TREPR_RS03255 TREPR_RS03260 PF04055 Radical SAM superfamily TREPR_RS03260 PF13353 4Fe-4S single cluster domain TREPR_RS03270 PF04542 Sigma-70 region 2 TREPR_RS03270 PF08281 Sigma-70, region 4 TREPR_RS03280 PF13237 4Fe-4S dicluster domain TREPR_RS03285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TREPR_RS03285 PF17147 TREPR_RS03285 TREPR_RS03290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS03295 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TREPR_RS03300 PF01381 Helix-turn-helix TREPR_RS03305 PF06296 TREPR_RS03305 TREPR_RS03310 PF01791 DeoC/LacD family aldolase TREPR_RS03335 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS03335 PF00672 HAMP domain TREPR_RS03350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TREPR_RS03355 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS03360 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS03365 PF10114 TREPR_RS03365 TREPR_RS03365 PF12833 Helix-turn-helix domain TREPR_RS03370 PF10114 TREPR_RS03370 TREPR_RS03370 PF12833 Helix-turn-helix domain TREPR_RS03375 PF02310 B12 binding domain TREPR_RS03375 PF02607 B12 binding domain TREPR_RS03385 PF00009 Elongation factor Tu GTP binding domain TREPR_RS03385 PF00679 Elongation factor G C-terminus TREPR_RS03385 PF03144 Elongation factor Tu domain 2 TREPR_RS03385 PF06421 GTP-binding protein LepA C-terminus TREPR_RS03385 PF14492 Elongation Factor G, domain II TREPR_RS03400 PF12784 TREPR_RS03400 TREPR_RS03420 PF01973 TREPR_RS03420 TREPR_RS03425 PF00639 PPIC-type PPIASE domain TREPR_RS03425 PF13624 SurA N-terminal domain TREPR_RS03435 PF01063 Aminotransferase class IV TREPR_RS03445 PF00535 Glycosyl transferase family 2 TREPR_RS03460 PF02417 TREPR_RS03460 TREPR_RS03465 PF02417 TREPR_RS03465 TREPR_RS03470 PF00152 tRNA synthetases class II (D, K and N) TREPR_RS03470 PF01336 OB-fold nucleic acid binding domain TREPR_RS03470 PF02938 GAD domain TREPR_RS03475 PF01797 Transposase IS200 like TREPR_RS03480 PF00691 OmpA family TREPR_RS03490 PF00313 'Cold-shock' DNA-binding domain TREPR_RS03490 PF01936 NYN domain TREPR_RS03495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS03495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREPR_RS03500 PF03544 Gram-negative bacterial TonB protein C-terminal TREPR_RS03505 PF02472 Biopolymer transport protein ExbD/TolR TREPR_RS03510 PF02472 Biopolymer transport protein ExbD/TolR TREPR_RS03515 PF01618 TREPR_RS03515 TREPR_RS03530 PF04002 RadC-like JAB domain TREPR_RS03535 PF00248 Aldo/keto reductase family TREPR_RS03535 PF13534 4Fe-4S dicluster domain TREPR_RS03545 PF06123 TREPR_RS03545 TREPR_RS03550 PF01207 Dihydrouridine synthase (Dus) TREPR_RS03555 PF00072 Response regulator receiver domain TREPR_RS03560 PF00753 Metallo-beta-lactamase superfamily TREPR_RS03565 PF01979 Amidohydrolase family TREPR_RS03570 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TREPR_RS03575 PF00206 Lyase TREPR_RS03575 PF14698 Argininosuccinate lyase C-terminal TREPR_RS03580 PF01850 PIN domain TREPR_RS03590 PF01381 Helix-turn-helix TREPR_RS03600 PF08308 TREPR_RS03600 TREPR_RS03605 PF04014 Antidote-toxin recognition MazE TREPR_RS03610 PF00764 Arginosuccinate synthase TREPR_RS03615 PF01546 Peptidase family M20/M25/M40 TREPR_RS03615 PF07687 Peptidase dimerisation domain TREPR_RS03620 PF07730 Histidine kinase TREPR_RS03620 PF13185 GAF domain TREPR_RS03625 PF00072 Response regulator receiver domain TREPR_RS03625 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03635 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03645 PF00005 ABC transporter TREPR_RS03655 PF03992 Antibiotic biosynthesis monooxygenase TREPR_RS03660 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS03670 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03675 PF00005 ABC transporter TREPR_RS03685 PF03358 NADPH-dependent FMN reductase TREPR_RS03690 PF00202 Aminotransferase class-III TREPR_RS03695 PF00696 Amino acid kinase family TREPR_RS03700 PF01118 Semialdehyde dehydrogenase, NAD binding domain TREPR_RS03700 PF02774 Semialdehyde dehydrogenase, dimerisation domain TREPR_RS03710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREPR_RS03710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREPR_RS03715 PF02615 Malate/L-lactate dehydrogenase TREPR_RS03720 PF13416 Bacterial extracellular solute-binding protein TREPR_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03730 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS03735 PF03009 Glycerophosphoryl diester phosphodiesterase family TREPR_RS03745 PF01381 Helix-turn-helix TREPR_RS03755 PF04754 TREPR_RS03755 TREPR_RS03760 PF09587 Bacterial capsule synthesis protein PGA_cap TREPR_RS03765 PF03600 Citrate transporter TREPR_RS03770 PF00330 Aconitase family (aconitate hydratase) TREPR_RS03770 PF00694 Aconitase C-terminal domain TREPR_RS03775 PF04223 Citrate lyase, alpha subunit (CitF) TREPR_RS03780 PF03328 HpcH/HpaI aldolase/citrate lyase family TREPR_RS03785 PF06857 TREPR_RS03785 TREPR_RS03790 PF04303 PrpF protein TREPR_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TREPR_RS03795 PF03466 LysR substrate binding domain TREPR_RS03810 PF00226 DnaJ domain TREPR_RS03815 PF00012 Hsp70 protein TREPR_RS03820 PF06803 TREPR_RS03820 TREPR_RS03825 PF04607 Region found in RelA / SpoT proteins TREPR_RS03830 PF06541 TREPR_RS03830 TREPR_RS03835 PF00255 Glutathione peroxidase TREPR_RS03840 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TREPR_RS03845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREPR_RS03845 PF10531 SLBB domain TREPR_RS03845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_RS03845 PF12838 4Fe-4S dicluster domain TREPR_RS03850 PF00037 4Fe-4S binding domain TREPR_RS03850 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS03850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_RS03850 PF13510 2Fe-2S iron-sulfur cluster binding domain TREPR_RS03855 PF12784 TREPR_RS03855 TREPR_RS03860 PF01636 Phosphotransferase enzyme family TREPR_RS03865 PF00171 Aldehyde dehydrogenase family TREPR_RS03865 PF00465 Iron-containing alcohol dehydrogenase TREPR_RS03875 PF00005 ABC transporter TREPR_RS03880 PF00005 ABC transporter TREPR_RS03885 PF02361 Cobalt transport protein TREPR_RS03890 PF01891 Cobalt uptake substrate-specific transmembrane region TREPR_RS03890 PF13190 TREPR_RS03890 TREPR_RS03910 PF00037 4Fe-4S binding domain TREPR_RS03910 PF02256 Iron hydrogenase small subunit TREPR_RS03910 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS03910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TREPR_RS03910 PF13510 2Fe-2S iron-sulfur cluster binding domain TREPR_RS03915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREPR_RS03915 PF10531 SLBB domain TREPR_RS03915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TREPR_RS03915 PF13237 4Fe-4S dicluster domain TREPR_RS03920 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin TREPR_RS03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TREPR_RS03930 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS03930 PF04060 Putative Fe-S cluster TREPR_RS03935 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS03940 PF13649 Methyltransferase domain TREPR_RS03945 PF13649 Methyltransferase domain TREPR_RS03950 PF08241 Methyltransferase domain TREPR_RS03955 PF01497 Periplasmic binding protein TREPR_RS03960 PF01032 FecCD transport family TREPR_RS03965 PF00005 ABC transporter TREPR_RS03970 PF01258 Prokaryotic dksA/traR C4-type zinc finger TREPR_RS03970 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon TREPR_RS03975 PF01497 Periplasmic binding protein TREPR_RS03980 PF01032 FecCD transport family TREPR_RS03985 PF00005 ABC transporter TREPR_RS03990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS04005 PF00005 ABC transporter TREPR_RS04005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS04010 PF00005 ABC transporter TREPR_RS04015 PF00155 Aminotransferase class I and II TREPR_RS04020 PF07726 ATPase family associated with various cellular activities (AAA) TREPR_RS04025 PF01882 TREPR_RS04025 TREPR_RS04035 PF00092 von Willebrand factor type A domain TREPR_RS04040 PF00092 von Willebrand factor type A domain TREPR_RS04045 PF13432 Tetratricopeptide repeat TREPR_RS04055 PF01713 Smr domain TREPR_RS04060 PF01176 Translation initiation factor 1A / IF-1 TREPR_RS04065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TREPR_RS04075 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS04085 PF02452 PemK-like protein TREPR_RS04090 PF13751 TREPR_RS04090 TREPR_RS04095 PF01909 Nucleotidyltransferase domain TREPR_RS04105 PF01242 6-pyruvoyl tetrahydropterin synthase TREPR_RS04110 PF02080 TrkA-C domain TREPR_RS04110 PF02254 TrkA-N domain TREPR_RS04115 PF02386 Cation transport protein TREPR_RS04120 PF04172 TREPR_RS04120 TREPR_RS04125 PF03788 TREPR_RS04125 TREPR_RS04130 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS04130 PF13306 Leucine rich repeats (6 copies) TREPR_RS04135 PF02589 Uncharacterised ACR, YkgG family COG1556 TREPR_RS04140 PF00011 Hsp20/alpha crystallin family TREPR_RS04145 PF04221 RelB antitoxin TREPR_RS04150 PF06769 Plasmid encoded toxin Txe TREPR_RS04155 PF10107 TREPR_RS04155 TREPR_RS04160 PF12733 TREPR_RS04160 TREPR_RS04165 PF00133 tRNA synthetases class I (I, L, M and V) TREPR_RS04165 PF08264 Anticodon-binding domain of tRNA TREPR_RS04165 PF09334 tRNA synthetases class I (M) TREPR_RS04165 PF13603 Leucyl-tRNA synthetase, Domain 2 TREPR_RS04170 PF07690 Major Facilitator Superfamily TREPR_RS04175 PF02153 Prephenate dehydrogenase TREPR_RS04180 PF00793 DAHP synthetase I family TREPR_RS04190 PF00326 Prolyl oligopeptidase family TREPR_RS04195 PF00005 ABC transporter TREPR_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS04205 PF13343 Bacterial extracellular solute-binding protein TREPR_RS04210 PF00731 AIR carboxylase TREPR_RS04215 PF01969 Protein of unknown function DUF111 TREPR_RS04220 PF00733 Asparagine synthase TREPR_RS04225 PF07690 Major Facilitator Superfamily TREPR_RS04230 PF12953 TREPR_RS04230 TREPR_RS04235 PF00881 Nitroreductase family TREPR_RS04240 PF01634 ATP phosphoribosyltransferase TREPR_RS04240 PF08029 HisG, C-terminal domain TREPR_RS04245 PF00475 Imidazoleglycerol-phosphate dehydratase TREPR_RS04250 PF00117 Glutamine amidotransferase class-I TREPR_RS04255 PF00977 Histidine biosynthesis protein TREPR_RS04260 PF00977 Histidine biosynthesis protein TREPR_RS04260 PF01502 Phosphoribosyl-AMP cyclohydrolase TREPR_RS04260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TREPR_RS04265 PF00155 Aminotransferase class I and II TREPR_RS04270 PF00815 Histidinol dehydrogenase TREPR_RS04275 PF04073 Aminoacyl-tRNA editing domain TREPR_RS04285 PF13481 AAA domain TREPR_RS04285 PF13541 Subunit ChlI of Mg-chelatase TREPR_RS04295 PF04199 Putative cyclase TREPR_RS04300 PF00183 Hsp90 protein TREPR_RS04300 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS04305 PF00072 Response regulator receiver domain TREPR_RS04305 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS04305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS04305 PF11845 TREPR_RS04305 TREPR_RS04310 PF05140 TREPR_RS04310 TREPR_RS04315 PF01578 TREPR_RS04315 TREPR_RS04330 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS04330 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS04330 PF05524 PEP-utilising enzyme, N-terminal TREPR_RS04335 PF01926 50S ribosome-binding GTPase TREPR_RS04335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TREPR_RS04340 PF13411 MerR HTH family regulatory protein TREPR_RS04345 PF09243 TREPR_RS04345 TREPR_RS04350 PF00950 TREPR_RS04350 TREPR_RS04355 PF00005 ABC transporter TREPR_RS04360 PF01297 Periplasmic solute binding protein family TREPR_RS04370 PF00702 haloacid dehalogenase-like hydrolase TREPR_RS04385 PF02867 Ribonucleotide reductase, barrel domain TREPR_RS04385 PF08471 TREPR_RS04385 TREPR_RS04390 PF01070 FMN-dependent dehydrogenase TREPR_RS04395 PF02664 S-Ribosylhomocysteinase (LuxS) TREPR_RS04400 PF12733 TREPR_RS04400 TREPR_RS04415 PF12733 TREPR_RS04415 TREPR_RS04445 PF01048 Phosphorylase superfamily TREPR_RS04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS04455 PF00072 Response regulator receiver domain TREPR_RS04455 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS04460 PF00990 GGDEF domain TREPR_RS04460 PF13492 GAF domain TREPR_RS04475 PF02021 Uncharacterised protein family UPF0102 TREPR_RS04480 PF11871 TREPR_RS04480 TREPR_RS04480 PF13487 HD domain TREPR_RS04485 PF01312 FlhB HrpN YscU SpaS Family TREPR_RS04495 PF01245 Ribosomal protein L19 TREPR_RS04500 PF01746 tRNA (Guanine-1)-methyltransferase TREPR_RS04505 PF01782 RimM N-terminal domain TREPR_RS04505 PF05239 PRC-barrel domain TREPR_RS04510 PF13083 KH domain TREPR_RS04515 PF00886 Ribosomal protein S16 TREPR_RS04525 PF00072 Response regulator receiver domain TREPR_RS04525 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS04525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS04535 PF13470 TREPR_RS04535 TREPR_RS04545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TREPR_RS04545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TREPR_RS04550 PF14278 TREPR_RS04550 TREPR_RS04585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS04590 PF05036 Sporulation related domain TREPR_RS04595 PF01121 Dephospho-CoA kinase TREPR_RS04600 PF07690 Major Facilitator Superfamily TREPR_RS04610 PF01052 Surface presentation of antigens (SPOA) TREPR_RS04610 PF02154 Flagellar motor switch protein FliM TREPR_RS04615 PF08245 Mur ligase middle domain TREPR_RS04620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS04625 PF12822 Protein of unknown function (DUF3816) TREPR_RS04630 PF00005 ABC transporter TREPR_RS04635 PF02361 Cobalt transport protein TREPR_RS04640 PF02219 Methylenetetrahydrofolate reductase TREPR_RS04645 PF01268 Formate--tetrahydrofolate ligase TREPR_RS04650 PF04961 Formiminotransferase-cyclodeaminase TREPR_RS04655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TREPR_RS04655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TREPR_RS04660 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS04665 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS04665 PF04060 Putative Fe-S cluster TREPR_RS04665 PF13188 PAS domain TREPR_RS04670 PF04266 ASCH domain TREPR_RS04680 PF04383 KilA-N domain TREPR_RS04685 PF06250 TREPR_RS04685 TREPR_RS04690 PF13476 AAA domain TREPR_RS04695 PF00271 Helicase conserved C-terminal domain TREPR_RS04695 PF04851 Type III restriction enzyme, res subunit TREPR_RS04695 PF13156 TREPR_RS04695 TREPR_RS04710 PF00717 Peptidase S24-like TREPR_RS04720 PF08719 Domain of unknown function (DUF1768) TREPR_RS04745 PF03683 TREPR_RS04745 TREPR_RS04750 PF00994 Probable molybdopterin binding domain TREPR_RS04750 PF03453 MoeA N-terminal region (domain I and II) TREPR_RS04750 PF03454 MoeA C-terminal region (domain IV) TREPR_RS04760 PF00384 Molybdopterin oxidoreductase TREPR_RS04760 PF01568 Molydopterin dinucleotide binding domain TREPR_RS04760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TREPR_RS04765 PF13247 4Fe-4S dicluster domain TREPR_RS04770 PF02634 FdhD/NarQ family TREPR_RS04780 PF13247 4Fe-4S dicluster domain TREPR_RS04785 PF02256 Iron hydrogenase small subunit TREPR_RS04785 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS04785 PF13237 4Fe-4S dicluster domain TREPR_RS04790 PF12804 MobA-like NTP transferase domain TREPR_RS04795 PF01869 BadF/BadG/BcrA/BcrD ATPase family TREPR_RS04800 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TREPR_RS04805 PF00005 ABC transporter TREPR_RS04810 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS04825 PF03841 L-seryl-tRNA selenium transferase TREPR_RS04825 PF12390 TREPR_RS04825 TREPR_RS04830 PF00009 Elongation factor Tu GTP binding domain TREPR_RS04830 PF03144 Elongation factor Tu domain 2 TREPR_RS04830 PF09107 Elongation factor SelB, winged helix TREPR_RS04835 PF00266 Aminotransferase class-V TREPR_RS04840 PF01206 Sulfurtransferase TusA TREPR_RS04840 PF02635 DsrE/DsrF-like family TREPR_RS04845 PF00586 AIR synthase related protein, N-terminal domain TREPR_RS04845 PF02769 AIR synthase related protein, C-terminal domain TREPR_RS04850 PF11823 TREPR_RS04850 TREPR_RS04865 PF00384 Molybdopterin oxidoreductase TREPR_RS04865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TREPR_RS04870 PF00384 Molybdopterin oxidoreductase TREPR_RS04870 PF01568 Molydopterin dinucleotide binding domain TREPR_RS04875 PF07728 AAA domain (dynein-related subfamily) TREPR_RS04885 PF00111 2Fe-2S iron-sulfur cluster binding domain TREPR_RS04885 PF14574 Domain of unknown function (DUF4445) TREPR_RS04890 PF12654 TREPR_RS04890 TREPR_RS04895 PF03063 Prismane/CO dehydrogenase family TREPR_RS04900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS04905 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit TREPR_RS04910 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TREPR_RS04915 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit TREPR_RS04915 PF04060 Putative Fe-S cluster TREPR_RS04920 PF00809 Pterin binding enzyme TREPR_RS04930 PF10133 TREPR_RS04930 TREPR_RS04935 PF00476 DNA polymerase family A TREPR_RS04935 PF01367 5'-3' exonuclease, C-terminal SAM fold TREPR_RS04935 PF01612 3'-5' exonuclease TREPR_RS04935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TREPR_RS04940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS04940 PF00672 HAMP domain TREPR_RS04940 PF17200 TREPR_RS04940 TREPR_RS04945 PF13487 HD domain TREPR_RS04950 PF00072 Response regulator receiver domain TREPR_RS04950 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS04950 PF01627 Hpt domain TREPR_RS04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS04955 PF00072 Response regulator receiver domain TREPR_RS04960 PF03600 Citrate transporter TREPR_RS04965 PF00155 Aminotransferase class I and II TREPR_RS04970 PF03744 TREPR_RS04970 TREPR_RS04975 PF00202 Aminotransferase class-III TREPR_RS04980 PF13500 AAA domain TREPR_RS04985 PF00821 Phosphoenolpyruvate carboxykinase TREPR_RS05000 PF14262 Domain of unknown function (DUF4353) TREPR_RS05005 PF13416 Bacterial extracellular solute-binding protein TREPR_RS05015 PF01926 50S ribosome-binding GTPase TREPR_RS05015 PF07650 KH domain TREPR_RS05020 PF00702 haloacid dehalogenase-like hydrolase TREPR_RS05025 PF03099 Biotin/lipoate A/B protein ligase family TREPR_RS05030 PF10646 TREPR_RS05030 TREPR_RS05035 PF13277 YmdB-like protein TREPR_RS05040 PF04794 YdjC-like protein TREPR_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05050 PF00005 ABC transporter TREPR_RS05050 PF08402 TOBE domain TREPR_RS05055 PF13343 Bacterial extracellular solute-binding protein TREPR_RS05065 PF00013 KH domain TREPR_RS05065 PF01966 HD domain TREPR_RS05065 PF12072 TREPR_RS05065 TREPR_RS05070 PF00005 ABC transporter TREPR_RS05070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS05075 PF00005 ABC transporter TREPR_RS05075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS05080 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05080 PF12911 TREPR_RS05080 TREPR_RS05085 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS05095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS05110 PF00248 Aldo/keto reductase family TREPR_RS05115 PF02073 Thermophilic metalloprotease (M29) TREPR_RS05120 PF01546 Peptidase family M20/M25/M40 TREPR_RS05125 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS05130 PF01554 MatE TREPR_RS05135 PF00005 ABC transporter TREPR_RS05140 PF13100 TREPR_RS05140 TREPR_RS05145 PF06835 Lipopolysaccharide-assembly, LptC-related TREPR_RS05150 PF00117 Glutamine amidotransferase class-I TREPR_RS05150 PF06418 CTP synthase N-terminus TREPR_RS05155 PF01739 CheR methyltransferase, SAM binding domain TREPR_RS05155 PF03705 CheR methyltransferase, all-alpha domain TREPR_RS05160 PF00072 Response regulator receiver domain TREPR_RS05160 PF01339 CheB methylesterase TREPR_RS05165 PF13649 Methyltransferase domain TREPR_RS05170 PF04468 TREPR_RS05170 TREPR_RS05175 PF03885 Protein of unknown function (DUF327) TREPR_RS05180 PF04519 TREPR_RS05180 TREPR_RS05185 PF01551 Peptidase family M23 TREPR_RS05190 PF13407 Periplasmic binding protein domain TREPR_RS05195 PF00672 HAMP domain TREPR_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS05195 PF06580 TREPR_RS05195 TREPR_RS05200 PF00072 Response regulator receiver domain TREPR_RS05200 PF12833 Helix-turn-helix domain TREPR_RS05205 PF13407 Periplasmic binding protein domain TREPR_RS05210 PF13407 Periplasmic binding protein domain TREPR_RS05215 PF00005 ABC transporter TREPR_RS05220 PF02653 TREPR_RS05220 TREPR_RS05225 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS05230 PF00009 Elongation factor Tu GTP binding domain TREPR_RS05230 PF00679 Elongation factor G C-terminus TREPR_RS05230 PF03144 Elongation factor Tu domain 2 TREPR_RS05230 PF03764 Elongation factor G, domain IV TREPR_RS05230 PF14492 Elongation Factor G, domain II TREPR_RS05240 PF00400 WD domain, G-beta repeat TREPR_RS05240 PF00656 Caspase domain TREPR_RS05245 PF00881 Nitroreductase family TREPR_RS05250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS05255 PF00294 pfkB family carbohydrate kinase TREPR_RS05260 PF01081 KDPG and KHG aldolase TREPR_RS05265 PF01614 Bacterial transcriptional regulator TREPR_RS05265 PF09339 IclR helix-turn-helix domain TREPR_RS05270 PF13416 Bacterial extracellular solute-binding protein TREPR_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05285 PF01301 Glycosyl hydrolases family 35 TREPR_RS05290 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TREPR_RS05290 PF13378 Enolase C-terminal domain-like TREPR_RS05295 PF00270 DEAD/DEAH box helicase TREPR_RS05295 PF00271 Helicase conserved C-terminal domain TREPR_RS05295 PF03880 DbpA RNA binding domain TREPR_RS05300 PF02631 RecX family TREPR_RS05305 PF00380 Ribosomal protein S9/S16 TREPR_RS05310 PF00572 Ribosomal protein L13 TREPR_RS05325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS05325 PF00672 HAMP domain TREPR_RS05330 PF01118 Semialdehyde dehydrogenase, NAD binding domain TREPR_RS05330 PF02774 Semialdehyde dehydrogenase, dimerisation domain TREPR_RS05335 PF00701 Dihydrodipicolinate synthetase family TREPR_RS05340 PF01113 Dihydrodipicolinate reductase, N-terminus TREPR_RS05340 PF05173 Dihydrodipicolinate reductase, C-terminus TREPR_RS05345 PF00696 Amino acid kinase family TREPR_RS05350 PF00773 RNB domain TREPR_RS05355 PF01584 CheW-like domain TREPR_RS05355 PF01627 Hpt domain TREPR_RS05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS05355 PF02895 Signal transducing histidine kinase, homodimeric domain TREPR_RS05355 PF07194 P2 response regulator binding domain TREPR_RS05360 PF01584 CheW-like domain TREPR_RS05360 PF01739 CheR methyltransferase, SAM binding domain TREPR_RS05365 PF13690 Chemotaxis phosphatase CheX TREPR_RS05375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TREPR_RS05375 PF02378 Phosphotransferase system, EIIC TREPR_RS05380 PF00381 PTS HPr component phosphorylation site TREPR_RS05385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS05385 PF00874 PRD domain TREPR_RS05385 PF08279 HTH domain TREPR_RS05390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS05395 PF00294 pfkB family carbohydrate kinase TREPR_RS05400 PF00107 Zinc-binding dehydrogenase TREPR_RS05400 PF08240 Alcohol dehydrogenase GroES-like domain TREPR_RS05405 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS05405 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS05405 PF05524 PEP-utilising enzyme, N-terminal TREPR_RS05410 PF01042 Endoribonuclease L-PSP TREPR_RS05415 PF03783 Curli production assembly/transport component CsgG TREPR_RS05415 PF08308 TREPR_RS05415 TREPR_RS05420 PF00027 Cyclic nucleotide-binding domain TREPR_RS05420 PF13545 Crp-like helix-turn-helix domain TREPR_RS05425 PF00037 4Fe-4S binding domain TREPR_RS05430 PF00874 PRD domain TREPR_RS05430 PF03123 CAT RNA binding domain TREPR_RS05435 PF08282 haloacid dehalogenase-like hydrolase TREPR_RS05440 PF00300 Histidine phosphatase superfamily (branch 1) TREPR_RS05445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 TREPR_RS05445 PF00367 phosphotransferase system, EIIB TREPR_RS05445 PF02378 Phosphotransferase system, EIIC TREPR_RS05450 PF00149 Calcineurin-like phosphoesterase TREPR_RS05450 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS05455 PF00232 Glycosyl hydrolase family 1 TREPR_RS05460 PF00381 PTS HPr component phosphorylation site TREPR_RS05465 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS05465 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS05465 PF05524 PEP-utilising enzyme, N-terminal TREPR_RS05475 PF00122 E1-E2 ATPase TREPR_RS05475 PF00403 Heavy-metal-associated domain TREPR_RS05475 PF00702 haloacid dehalogenase-like hydrolase TREPR_RS05480 PF01022 Bacterial regulatory protein, arsR family TREPR_RS05485 PF00916 TREPR_RS05485 TREPR_RS05485 PF01740 STAS domain TREPR_RS05490 PF04851 Type III restriction enzyme, res subunit TREPR_RS05490 PF13625 TREPR_RS05490 TREPR_RS05490 PF16203 TREPR_RS05490 TREPR_RS05500 PF01936 NYN domain TREPR_RS05500 PF12872 OST-HTH/LOTUS domain TREPR_RS05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS05505 PF00672 HAMP domain TREPR_RS05505 PF02743 Cache domain TREPR_RS05515 PF01709 Transcriptional regulator TREPR_RS05520 PF02075 Crossover junction endodeoxyribonuclease RuvC TREPR_RS05525 PF01584 CheW-like domain TREPR_RS05530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREPR_RS05535 PF01513 ATP-NAD kinase TREPR_RS05540 PF02463 RecF/RecN/SMC N terminal domain TREPR_RS05550 PF00005 ABC transporter TREPR_RS05550 PF00664 ABC transporter transmembrane region TREPR_RS05555 PF00005 ABC transporter TREPR_RS05555 PF00664 ABC transporter transmembrane region TREPR_RS05560 PF03992 Antibiotic biosynthesis monooxygenase TREPR_RS05565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS05570 PF00023 Ankyrin repeat TREPR_RS05570 PF12796 Ankyrin repeats (3 copies) TREPR_RS05570 PF13857 Ankyrin repeats (many copies) TREPR_RS05575 PF04471 Restriction endonuclease TREPR_RS05575 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 TREPR_RS05580 PF12784 TREPR_RS05580 TREPR_RS05590 PF00012 Hsp70 protein TREPR_RS05590 PF01476 LysM domain TREPR_RS05595 PF01464 Transglycosylase SLT domain TREPR_RS05600 PF01580 FtsK/SpoIIIE family TREPR_RS05600 PF09397 Ftsk gamma domain TREPR_RS05605 PF01548 TREPR_RS05605 TREPR_RS05605 PF02371 TREPR_RS05605 TREPR_RS05610 PF00072 Response regulator receiver domain TREPR_RS05610 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS05610 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS05620 PF03630 Fumble TREPR_RS05625 PF13420 Acetyltransferase (GNAT) domain TREPR_RS05630 PF00704 Glycosyl hydrolases family 18 TREPR_RS05635 PF13531 Bacterial extracellular solute-binding protein TREPR_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS05645 PF00005 ABC transporter TREPR_RS05650 PF03459 TOBE domain TREPR_RS05655 PF03551 Transcriptional regulator PadR-like family TREPR_RS05655 PF10400 Virulence activator alpha C-term TREPR_RS05660 PF02310 B12 binding domain TREPR_RS05665 PF12784 TREPR_RS05665 TREPR_RS05670 PF00072 Response regulator receiver domain TREPR_RS05670 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS05670 PF00672 HAMP domain TREPR_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS05670 PF02743 Cache domain TREPR_RS05685 PF02310 B12 binding domain TREPR_RS05685 PF02607 B12 binding domain TREPR_RS05690 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS05695 PF00809 Pterin binding enzyme TREPR_RS05700 PF07690 Major Facilitator Superfamily TREPR_RS05705 PF02492 CobW/HypB/UreG, nucleotide-binding domain TREPR_RS05705 PF07683 Cobalamin synthesis protein cobW C-terminal domain TREPR_RS05710 PF07796 TREPR_RS05710 TREPR_RS05715 PF05685 Putative restriction endonuclease TREPR_RS05720 PF00158 Sigma-54 interaction domain TREPR_RS05720 PF01590 GAF domain TREPR_RS05720 PF02954 Bacterial regulatory protein, Fis family TREPR_RS05725 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREPR_RS05730 PF00543 Nitrogen regulatory protein P-II TREPR_RS05735 PF00543 Nitrogen regulatory protein P-II TREPR_RS05740 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS05745 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS05750 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS05755 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS05760 PF02579 Dinitrogenase iron-molybdenum cofactor TREPR_RS05760 PF04055 Radical SAM superfamily TREPR_RS05760 PF13394 4Fe-4S single cluster domain TREPR_RS05770 PF00117 Glutamine amidotransferase class-I TREPR_RS05775 PF00682 HMGL-like TREPR_RS05785 PF00994 Probable molybdopterin binding domain TREPR_RS05790 PF01738 Dienelactone hydrolase family TREPR_RS05795 PF02810 SEC-C motif TREPR_RS05795 PF04055 Radical SAM superfamily TREPR_RS05795 PF13186 Iron-sulfur cluster-binding domain TREPR_RS05810 PF06296 TREPR_RS05810 TREPR_RS05845 PF02120 Flagellar hook-length control protein FliK TREPR_RS05850 PF03963 TREPR_RS05850 TREPR_RS05855 PF00460 Flagella basal body rod protein TREPR_RS05855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREPR_RS05855 PF07559 Flagellar basal body protein FlaE TREPR_RS05860 PF06289 TREPR_RS05860 TREPR_RS05865 PF01618 TREPR_RS05865 TREPR_RS05870 PF00691 OmpA family TREPR_RS05870 PF13677 TREPR_RS05870 TREPR_RS05875 PF03748 TREPR_RS05875 TREPR_RS05880 PF01052 Surface presentation of antigens (SPOA) TREPR_RS05880 PF02154 Flagellar motor switch protein FliM TREPR_RS05885 PF01052 Surface presentation of antigens (SPOA) TREPR_RS05890 PF04347 TREPR_RS05890 TREPR_RS05895 PF00813 TREPR_RS05895 TREPR_RS05900 PF01313 TREPR_RS05900 TREPR_RS05905 PF01311 TREPR_RS05905 TREPR_RS05910 PF01312 FlhB HrpN YscU SpaS Family TREPR_RS05915 PF00771 FHIPEP family TREPR_RS05920 PF00448 SRP54-type protein, GTPase domain TREPR_RS05925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS05935 PF04539 Sigma-70 region 3 TREPR_RS05935 PF04542 Sigma-70 region 2 TREPR_RS05935 PF04545 Sigma-70, region 4 TREPR_RS05940 PF03961 TREPR_RS05940 TREPR_RS05940 PF14804 Jag N-terminus TREPR_RS05960 PF00149 Calcineurin-like phosphoesterase TREPR_RS05960 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS05965 PF00293 NUDIX domain TREPR_RS05970 PF13306 Leucine rich repeats (6 copies) TREPR_RS05975 PF09992 Predicted periplasmic protein (DUF2233) TREPR_RS06000 PF13306 Leucine rich repeats (6 copies) TREPR_RS06020 PF17131 TREPR_RS06020 TREPR_RS06025 PF03176 MMPL family TREPR_RS06030 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS06030 PF14278 TREPR_RS06030 TREPR_RS06035 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase TREPR_RS06035 PF13350 Tyrosine phosphatase family TREPR_RS06040 PF01554 MatE TREPR_RS06045 PF04246 TREPR_RS06045 TREPR_RS06050 PF13857 Ankyrin repeats (many copies) TREPR_RS06055 PF02146 Sir2 family TREPR_RS06065 PF00749 tRNA synthetases class I (E and Q), catalytic domain TREPR_RS06070 PF02127 Aminopeptidase I zinc metalloprotease (M18) TREPR_RS06075 PF14070 TREPR_RS06075 TREPR_RS06080 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TREPR_RS06085 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS06085 PF02861 Clp amino terminal domain TREPR_RS06085 PF07724 AAA domain (Cdc48 subfamily) TREPR_RS06085 PF10431 C-terminal, D2-small domain, of ClpB protein TREPR_RS06090 PF02617 ATP-dependent Clp protease adaptor protein ClpS TREPR_RS06095 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS06100 PF01694 Rhomboid family TREPR_RS06110 PF00149 Calcineurin-like phosphoesterase TREPR_RS06115 PF00156 Phosphoribosyl transferase domain TREPR_RS06120 PF01351 Ribonuclease HII TREPR_RS06135 PF12654 TREPR_RS06135 TREPR_RS06140 PF00288 GHMP kinases N terminal domain TREPR_RS06140 PF08544 GHMP kinases C terminal TREPR_RS06140 PF10509 Galactokinase galactose-binding signature TREPR_RS06145 PF01975 Survival protein SurE TREPR_RS06150 PF07719 Tetratricopeptide repeat TREPR_RS06150 PF13174 Tetratricopeptide repeat TREPR_RS06150 PF13432 Tetratricopeptide repeat TREPR_RS06170 PF02568 Thiamine biosynthesis protein (ThiI) TREPR_RS06170 PF02926 THUMP domain TREPR_RS06175 PF00266 Aminotransferase class-V TREPR_RS06180 PF01022 Bacterial regulatory protein, arsR family TREPR_RS06185 PF00953 Glycosyl transferase family 4 TREPR_RS06190 PF00696 Amino acid kinase family TREPR_RS06190 PF00742 Homoserine dehydrogenase TREPR_RS06190 PF01842 ACT domain TREPR_RS06190 PF03447 Homoserine dehydrogenase, NAD binding domain TREPR_RS06190 PF13840 ACT domain TREPR_RS06205 PF12733 TREPR_RS06205 TREPR_RS06215 PF12733 TREPR_RS06215 TREPR_RS06230 PF13432 Tetratricopeptide repeat TREPR_RS06235 PF13432 Tetratricopeptide repeat TREPR_RS06240 PF00037 4Fe-4S binding domain TREPR_RS06245 PF04365 Protein of unknown function (DUF497) TREPR_RS06255 PF04015 TREPR_RS06255 TREPR_RS06260 PF00343 Carbohydrate phosphorylase TREPR_RS06260 PF11897 TREPR_RS06260 TREPR_RS06270 PF03358 NADPH-dependent FMN reductase TREPR_RS06275 PF01850 PIN domain TREPR_RS06285 PF13347 MFS/sugar transport protein TREPR_RS06290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREPR_RS06290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TREPR_RS06295 PF01258 Prokaryotic dksA/traR C4-type zinc finger TREPR_RS06300 PF02811 PHP domain TREPR_RS06305 PF00072 Response regulator receiver domain TREPR_RS06310 PF01965 DJ-1/PfpI family TREPR_RS06315 PF04246 TREPR_RS06315 TREPR_RS06320 PF13277 YmdB-like protein TREPR_RS06325 PF00515 Tetratricopeptide repeat TREPR_RS06325 PF13181 Tetratricopeptide repeat TREPR_RS06325 PF14559 Tetratricopeptide repeat TREPR_RS06340 PF00166 Chaperonin 10 Kd subunit TREPR_RS06345 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel TREPR_RS06350 PF08282 haloacid dehalogenase-like hydrolase TREPR_RS06355 PF13614 AAA domain TREPR_RS06360 PF02195 ParB-like nuclease domain TREPR_RS06365 PF01381 Helix-turn-helix TREPR_RS06370 PF00753 Metallo-beta-lactamase superfamily TREPR_RS06375 PF01921 tRNA synthetases class I (K) TREPR_RS06380 PF00334 Nucleoside diphosphate kinase TREPR_RS06385 PF01869 BadF/BadG/BcrA/BcrD ATPase family TREPR_RS06385 PF09989 TREPR_RS06385 TREPR_RS06390 PF06541 TREPR_RS06390 TREPR_RS06395 PF01966 HD domain TREPR_RS06400 PF01554 MatE TREPR_RS06410 PF02659 TREPR_RS06410 TREPR_RS06420 PF13173 AAA domain TREPR_RS06425 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TREPR_RS06425 PF04851 Type III restriction enzyme, res subunit TREPR_RS06425 PF11867 TREPR_RS06425 TREPR_RS06430 PF06114 Domain of unknown function (DUF955) TREPR_RS06435 PF14367 TREPR_RS06435 TREPR_RS06450 PF02384 N-6 DNA Methylase TREPR_RS06450 PF12161 HsdM N-terminal domain TREPR_RS06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS06455 PF00672 HAMP domain TREPR_RS06455 PF02743 Cache domain TREPR_RS06460 PF06245 TREPR_RS06460 TREPR_RS06465 PF00309 TREPR_RS06465 TREPR_RS06465 PF04552 Sigma-54, DNA binding domain TREPR_RS06465 PF04963 Sigma-54 factor, core binding domain TREPR_RS06470 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TREPR_RS06475 PF10672 S-adenosylmethionine-dependent methyltransferase TREPR_RS06480 PF02629 CoA binding domain TREPR_RS06480 PF06971 Putative DNA-binding protein N-terminus TREPR_RS06485 PF03180 NLPA lipoprotein TREPR_RS06490 PF11680 Protein of unknown function (DUF3276) TREPR_RS06495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TREPR_RS06495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TREPR_RS06500 PF00266 Aminotransferase class-V TREPR_RS06505 PF01592 NifU-like N terminal domain TREPR_RS06505 PF04324 BFD-like [2Fe-2S] binding domain TREPR_RS06520 PF12728 Helix-turn-helix domain TREPR_RS06560 PF02321 Outer membrane efflux protein TREPR_RS06565 PF00873 AcrB/AcrD/AcrF family TREPR_RS06570 PF16576 TREPR_RS06570 TREPR_RS06575 PF01243 Pyridoxamine 5'-phosphate oxidase TREPR_RS06580 PF02082 Transcriptional regulator TREPR_RS06585 PF01047 MarR family TREPR_RS06590 PF01554 MatE TREPR_RS06595 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS06595 PF00672 HAMP domain TREPR_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS06600 PF00072 Response regulator receiver domain TREPR_RS06600 PF00486 Transcriptional regulatory protein, C terminal TREPR_RS06610 PF07728 AAA domain (dynein-related subfamily) TREPR_RS06615 PF09967 TREPR_RS06615 TREPR_RS06620 PF04015 TREPR_RS06620 TREPR_RS06625 PF03773 TREPR_RS06625 TREPR_RS06630 PF00155 Aminotransferase class I and II TREPR_RS06635 PF03129 Anticodon binding domain TREPR_RS06635 PF13393 Histidyl-tRNA synthetase TREPR_RS06645 PF04015 TREPR_RS06645 TREPR_RS06650 PF13646 HEAT repeats TREPR_RS06660 PF01467 Cytidylyltransferase TREPR_RS06670 PF00550 Phosphopantetheine attachment site TREPR_RS06675 PF00035 Double-stranded RNA binding motif TREPR_RS06675 PF14622 Ribonuclease-III-like TREPR_RS06685 PF01743 Poly A polymerase head domain TREPR_RS06685 PF01966 HD domain TREPR_RS06685 PF12627 Probable RNA and SrmB- binding site of polymerase A TREPR_RS06690 PF04263 Thiamin pyrophosphokinase, catalytic domain TREPR_RS06695 PF01250 Ribosomal protein S6 TREPR_RS06700 PF00436 Single-strand binding protein family TREPR_RS06705 PF01084 Ribosomal protein S18 TREPR_RS06710 PF09991 TREPR_RS06710 TREPR_RS06715 PF01281 Ribosomal protein L9, N-terminal domain TREPR_RS06715 PF03948 Ribosomal protein L9, C-terminal domain TREPR_RS06720 PF00772 DnaB-like helicase N terminal domain TREPR_RS06720 PF03796 DnaB-like helicase C terminal domain TREPR_RS06725 PF10719 TREPR_RS06725 TREPR_RS06735 PF00595 PDZ domain (Also known as DHR or GLGF) TREPR_RS06735 PF02163 Peptidase family M50 TREPR_RS06740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TREPR_RS06740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal TREPR_RS06740 PF13288 DXP reductoisomerase C-terminal domain TREPR_RS06745 PF01148 Cytidylyltransferase family TREPR_RS06750 PF01255 Putative undecaprenyl diphosphate synthase TREPR_RS06755 PF01765 Ribosome recycling factor TREPR_RS06760 PF00889 Elongation factor TS TREPR_RS06765 PF00318 Ribosomal protein S2 TREPR_RS06770 PF02545 Maf-like protein TREPR_RS06775 PF03061 Thioesterase superfamily TREPR_RS06780 PF00005 ABC transporter TREPR_RS06780 PF00664 ABC transporter transmembrane region TREPR_RS06785 PF00005 ABC transporter TREPR_RS06785 PF00664 ABC transporter transmembrane region TREPR_RS06800 PF07523 Bacterial Ig-like domain (group 3) TREPR_RS06805 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS06810 PF00180 Isocitrate/isopropylmalate dehydrogenase TREPR_RS06815 PF01263 Aldose 1-epimerase TREPR_RS06825 PF10962 TREPR_RS06825 TREPR_RS06830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS06830 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS06830 PF16886 TREPR_RS06830 TREPR_RS06835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS06835 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS06840 PF01813 ATP synthase subunit D TREPR_RS06850 PF00137 ATP synthase subunit C TREPR_RS06855 PF04551 GcpE protein TREPR_RS06860 PF13161 TREPR_RS06860 TREPR_RS06880 PF14681 Uracil phosphoribosyltransferase TREPR_RS06885 PF14559 Tetratricopeptide repeat TREPR_RS06890 PF04456 Protein of unknown function (DUF503) TREPR_RS06910 PF02390 Putative methyltransferase TREPR_RS06915 PF00533 BRCA1 C Terminus (BRCT) domain TREPR_RS06915 PF01653 NAD-dependent DNA ligase adenylation domain TREPR_RS06915 PF03120 NAD-dependent DNA ligase OB-fold domain TREPR_RS06915 PF14520 Helix-hairpin-helix domain TREPR_RS06920 PF00270 DEAD/DEAH box helicase TREPR_RS06920 PF00271 Helicase conserved C-terminal domain TREPR_RS06920 PF04408 Helicase associated domain (HA2) TREPR_RS06920 PF08482 TREPR_RS06920 TREPR_RS06940 PF02223 Thymidylate kinase TREPR_RS06945 PF04357 TREPR_RS06945 TREPR_RS06950 PF01103 Surface antigen TREPR_RS06950 PF07244 Surface antigen variable number repeat TREPR_RS06955 PF03938 Outer membrane protein (OmpH-like) TREPR_RS06960 PF00488 MutS domain V TREPR_RS06960 PF01624 MutS domain I TREPR_RS06960 PF05188 MutS domain II TREPR_RS06960 PF05190 MutS family domain IV TREPR_RS06960 PF05192 MutS domain III TREPR_RS06965 PF04383 KilA-N domain TREPR_RS06975 PF08543 Phosphomethylpyrimidine kinase TREPR_RS06985 PF00149 Calcineurin-like phosphoesterase TREPR_RS06990 PF13424 Tetratricopeptide repeat TREPR_RS06995 PF13176 Tetratricopeptide repeat TREPR_RS06995 PF13414 TPR repeat TREPR_RS06995 PF13432 Tetratricopeptide repeat TREPR_RS06995 PF14559 Tetratricopeptide repeat TREPR_RS07000 PF13740 ACT domain TREPR_RS07005 PF05167 Uncharacterised ACR (DUF711) TREPR_RS07015 PF06769 Plasmid encoded toxin Txe TREPR_RS07020 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS07030 PF01381 Helix-turn-helix TREPR_RS07035 PF07927 YcfA-like protein TREPR_RS07040 PF01381 Helix-turn-helix TREPR_RS07045 PF08922 Domain of unknown function (DUF1905) TREPR_RS07045 PF13376 TREPR_RS07045 TREPR_RS07050 PF10979 TREPR_RS07050 TREPR_RS07055 PF13360 PQQ-like domain TREPR_RS07055 PF13646 HEAT repeats TREPR_RS07060 PF04002 RadC-like JAB domain TREPR_RS07060 PF13307 Helicase C-terminal domain TREPR_RS07070 PF02082 Transcriptional regulator TREPR_RS07075 PF00270 DEAD/DEAH box helicase TREPR_RS07075 PF00271 Helicase conserved C-terminal domain TREPR_RS07080 PF03167 Uracil DNA glycosylase superfamily TREPR_RS07085 PF03477 ATP cone domain TREPR_RS07090 PF00534 Glycosyl transferases group 1 TREPR_RS07090 PF13439 Glycosyltransferase Family 4 TREPR_RS07095 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS07095 PF02190 ATP-dependent protease La (LON) domain TREPR_RS07095 PF05362 Lon protease (S16) C-terminal proteolytic domain TREPR_RS07100 PF06689 ClpX C4-type zinc finger TREPR_RS07100 PF07724 AAA domain (Cdc48 subfamily) TREPR_RS07100 PF10431 C-terminal, D2-small domain, of ClpB protein TREPR_RS07105 PF00574 Clp protease TREPR_RS07110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREPR_RS07110 PF05697 Bacterial trigger factor protein (TF) TREPR_RS07110 PF05698 Bacterial trigger factor protein (TF) C-terminus TREPR_RS07125 PF13604 AAA domain TREPR_RS07170 PF13975 TREPR_RS07170 TREPR_RS07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS07190 PF07497 Rho termination factor, RNA-binding domain TREPR_RS07190 PF07498 Rho termination factor, N-terminal domain TREPR_RS07195 PF01197 Ribosomal protein L31 TREPR_RS07205 PF02381 MraZ protein TREPR_RS07210 PF01795 MraW methylase family TREPR_RS07220 PF00953 Glycosyl transferase family 4 TREPR_RS07220 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TREPR_RS07225 PF01098 TREPR_RS07225 TREPR_RS07230 PF08478 POTRA domain, FtsQ-type TREPR_RS07235 PF02491 SHS2 domain inserted in FTSA TREPR_RS07235 PF14450 Cell division protein FtsA TREPR_RS07240 PF00091 Tubulin/FtsZ family, GTPase domain TREPR_RS07240 PF12327 FtsZ family, C-terminal domain TREPR_RS07245 PF00589 Phage integrase family TREPR_RS07245 PF02899 Phage integrase, N-terminal SAM-like domain TREPR_RS07255 PF02481 DNA recombination-mediator protein A TREPR_RS07260 PF01131 DNA topoisomerase TREPR_RS07260 PF01396 TREPR_RS07260 TREPR_RS07260 PF01751 Toprim domain TREPR_RS07265 PF00589 Phage integrase family TREPR_RS07265 PF02899 Phage integrase, N-terminal SAM-like domain TREPR_RS07270 PF00227 Proteasome subunit TREPR_RS07275 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS07275 PF07724 AAA domain (Cdc48 subfamily) TREPR_RS07280 PF00460 Flagella basal body rod protein TREPR_RS07285 PF00460 Flagella basal body rod protein TREPR_RS07285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREPR_RS07290 PF02049 TREPR_RS07290 TREPR_RS07295 PF01514 Secretory protein of YscJ/FliF family TREPR_RS07295 PF08345 TREPR_RS07295 TREPR_RS07300 PF01706 FliG C-terminal domain TREPR_RS07300 PF14841 FliG middle domain TREPR_RS07300 PF14842 FliG N-terminal domain TREPR_RS07305 PF02108 TREPR_RS07305 TREPR_RS07310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS07310 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS07315 PF02050 Flagellar FliJ protein TREPR_RS07320 PF09084 NMT1/THI5 like TREPR_RS07325 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS07330 PF00005 ABC transporter TREPR_RS07340 PF17131 TREPR_RS07340 TREPR_RS07345 PF02687 TREPR_RS07345 TREPR_RS07350 PF02687 TREPR_RS07350 TREPR_RS07350 PF12704 MacB-like periplasmic core domain TREPR_RS07355 PF00005 ABC transporter TREPR_RS07360 PF02397 TREPR_RS07360 TREPR_RS07385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREPR_RS07385 PF04230 TREPR_RS07385 TREPR_RS07395 PF00005 ABC transporter TREPR_RS07400 PF01061 TREPR_RS07400 TREPR_RS07405 PF13641 Glycosyltransferase like family 2 TREPR_RS07410 PF00535 Glycosyl transferase family 2 TREPR_RS07415 PF00535 Glycosyl transferase family 2 TREPR_RS07420 PF03275 UDP-galactopyranose mutase TREPR_RS07420 PF13450 NAD(P)-binding Rossmann-like domain TREPR_RS07425 PF01192 RNA polymerase Rpb6 TREPR_RS07430 PF01715 IPP transferase TREPR_RS07435 PF13650 Aspartyl protease TREPR_RS07440 PF00133 tRNA synthetases class I (I, L, M and V) TREPR_RS07440 PF08264 Anticodon-binding domain of tRNA TREPR_RS07450 PF09723 TREPR_RS07450 TREPR_RS07460 PF00207 Alpha-2-macroglobulin family TREPR_RS07460 PF01835 MG2 domain TREPR_RS07460 PF07703 Alpha-2-macroglobulin family N-terminal region TREPR_RS07460 PF10569 Alpha-macro-globulin thiol-ester bond-forming region TREPR_RS07460 PF11974 Alpha-2-macroglobulin MG1 domain TREPR_RS07460 PF13205 Bacterial Ig-like domain TREPR_RS07465 PF00905 Penicillin binding protein transpeptidase domain TREPR_RS07465 PF00912 Transglycosylase TREPR_RS07465 PF06832 TREPR_RS07465 TREPR_RS07470 PF13753 Putative flagellar system-associated repeat TREPR_RS07475 PF04055 Radical SAM superfamily TREPR_RS07475 PF13353 4Fe-4S single cluster domain TREPR_RS07485 PF00293 NUDIX domain TREPR_RS07495 PF00515 Tetratricopeptide repeat TREPR_RS07495 PF13181 Tetratricopeptide repeat TREPR_RS07495 PF13414 TPR repeat TREPR_RS07495 PF13432 Tetratricopeptide repeat TREPR_RS07500 PF01145 SPFH domain / Band 7 family TREPR_RS07505 PF01145 SPFH domain / Band 7 family TREPR_RS07510 PF05262 TREPR_RS07510 TREPR_RS07515 PF00759 Glycosyl hydrolase family 9 TREPR_RS07515 PF02927 N-terminal ig-like domain of cellulase TREPR_RS07520 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease TREPR_RS07525 PF07969 Amidohydrolase family TREPR_RS07530 PF01168 Alanine racemase, N-terminal domain TREPR_RS07530 PF14031 Putative serine dehydratase domain TREPR_RS07535 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS07540 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS07545 PF13416 Bacterial extracellular solute-binding protein TREPR_RS07550 PF08348 TREPR_RS07550 TREPR_RS07550 PF13309 TREPR_RS07550 TREPR_RS07555 PF12706 Beta-lactamase superfamily domain TREPR_RS07560 PF00005 ABC transporter TREPR_RS07565 PF12698 ABC-2 family transporter protein TREPR_RS07570 PF09822 TREPR_RS07570 TREPR_RS07575 PF14238 TREPR_RS07575 TREPR_RS07585 PF01875 Memo-like protein TREPR_RS07590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREPR_RS07590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREPR_RS07600 PF01973 TREPR_RS07600 TREPR_RS07605 PF01973 TREPR_RS07605 TREPR_RS07620 PF04977 Septum formation initiator TREPR_RS07630 PF01668 SmpB protein TREPR_RS07635 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS07635 PF08308 TREPR_RS07635 TREPR_RS07640 PF00717 Peptidase S24-like TREPR_RS07640 PF10502 Signal peptidase, peptidase S26 TREPR_RS07650 PF04055 Radical SAM superfamily TREPR_RS07660 PF00072 Response regulator receiver domain TREPR_RS07660 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS07675 PF09414 RNA ligase TREPR_RS07685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TREPR_RS07690 PF14384 TREPR_RS07690 TREPR_RS07705 PF13240 TREPR_RS07705 TREPR_RS07715 PF01381 Helix-turn-helix TREPR_RS07720 PF01928 CYTH domain TREPR_RS07725 PF01476 LysM domain TREPR_RS07725 PF01551 Peptidase family M23 TREPR_RS07730 PF00140 Sigma-70 factor, region 1 TREPR_RS07730 PF04539 Sigma-70 region 3 TREPR_RS07730 PF04542 Sigma-70 region 2 TREPR_RS07730 PF04545 Sigma-70, region 4 TREPR_RS07735 PF01119 DNA mismatch repair protein, C-terminal domain TREPR_RS07735 PF08676 MutL C terminal dimerisation domain TREPR_RS07735 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS07740 PF02609 Exonuclease VII small subunit TREPR_RS07745 PF02601 TREPR_RS07745 TREPR_RS07745 PF13742 TREPR_RS07745 TREPR_RS07760 PF02348 Cytidylyltransferase TREPR_RS07765 PF13489 Methyltransferase domain TREPR_RS07770 PF13535 ATP-grasp domain TREPR_RS07775 PF01520 N-acetylmuramoyl-L-alanine amidase TREPR_RS07785 PF04620 TREPR_RS07785 TREPR_RS07790 PF00515 Tetratricopeptide repeat TREPR_RS07790 PF04607 Region found in RelA / SpoT proteins TREPR_RS07790 PF13432 Tetratricopeptide repeat TREPR_RS07795 PF00072 Response regulator receiver domain TREPR_RS07795 PF13487 HD domain TREPR_RS07805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TREPR_RS07805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TREPR_RS07810 PF00162 Phosphoglycerate kinase TREPR_RS07815 PF00121 Triosephosphate isomerase TREPR_RS07820 PF00072 Response regulator receiver domain TREPR_RS07820 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS07820 PF01590 GAF domain TREPR_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS07825 PF00285 Citrate synthase TREPR_RS07830 PF05163 DinB family TREPR_RS07835 PF00009 Elongation factor Tu GTP binding domain TREPR_RS07835 PF00679 Elongation factor G C-terminus TREPR_RS07835 PF03764 Elongation factor G, domain IV TREPR_RS07835 PF14492 Elongation Factor G, domain II TREPR_RS07845 PF00204 DNA gyrase B TREPR_RS07845 PF01751 Toprim domain TREPR_RS07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS07850 PF03030 Inorganic H+ pyrophosphatase TREPR_RS07855 PF02447 TREPR_RS07855 TREPR_RS07860 PF00521 DNA gyrase/topoisomerase IV, subunit A TREPR_RS07865 PF13649 Methyltransferase domain TREPR_RS07880 PF04773 FecR protein TREPR_RS07895 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS07895 PF05226 TREPR_RS07895 TREPR_RS07900 PF01676 Metalloenzyme superfamily TREPR_RS07900 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TREPR_RS07905 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS07910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS07915 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS07920 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS07925 PF00005 ABC transporter TREPR_RS07925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS07930 PF00005 ABC transporter TREPR_RS07930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS07935 PF05343 M42 glutamyl aminopeptidase TREPR_RS07940 PF05343 M42 glutamyl aminopeptidase TREPR_RS07945 PF08495 TREPR_RS07945 TREPR_RS07945 PF10442 TREPR_RS07945 TREPR_RS07950 PF00072 Response regulator receiver domain TREPR_RS07950 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS07950 PF08448 PAS fold TREPR_RS07955 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS07955 PF12002 MgsA AAA+ ATPase C terminal TREPR_RS07955 PF16193 TREPR_RS07955 TREPR_RS07980 PF07736 Chorismate mutase type I TREPR_RS07990 PF11738 Protein of unknown function (DUF3298) TREPR_RS07995 PF00849 RNA pseudouridylate synthase TREPR_RS08000 PF01225 Mur ligase family, catalytic domain TREPR_RS08000 PF02875 Mur ligase family, glutamate ligase domain TREPR_RS08000 PF08245 Mur ligase middle domain TREPR_RS08005 PF03755 TREPR_RS08005 TREPR_RS08005 PF08340 TREPR_RS08005 TREPR_RS08010 PF13189 Cytidylate kinase-like family TREPR_RS08015 PF00633 Helix-hairpin-helix motif TREPR_RS08015 PF00730 HhH-GPD superfamily base excision DNA repair protein TREPR_RS08030 PF02397 TREPR_RS08030 TREPR_RS08030 PF13727 CoA-binding domain TREPR_RS08035 PF14052 Capsule assembly protein Wzi TREPR_RS08045 PF00534 Glycosyl transferases group 1 TREPR_RS08045 PF13439 Glycosyltransferase Family 4 TREPR_RS08050 PF02096 60Kd inner membrane protein TREPR_RS08055 PF02096 60Kd inner membrane protein TREPR_RS08060 PF02096 60Kd inner membrane protein TREPR_RS08065 PF00534 Glycosyl transferases group 1 TREPR_RS08070 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TREPR_RS08075 PF00884 Sulfatase TREPR_RS08075 PF02096 60Kd inner membrane protein TREPR_RS08080 PF00483 Nucleotidyl transferase TREPR_RS08080 PF13242 HAD-hyrolase-like TREPR_RS08085 PF13580 SIS domain TREPR_RS08090 PF00288 GHMP kinases N terminal domain TREPR_RS08090 PF08544 GHMP kinases C terminal TREPR_RS08095 PF00534 Glycosyl transferases group 1 TREPR_RS08095 PF13439 Glycosyltransferase Family 4 TREPR_RS08100 PF01501 Glycosyl transferase family 8 TREPR_RS08105 PF00534 Glycosyl transferases group 1 TREPR_RS08110 PF00872 TREPR_RS08110 TREPR_RS08120 PF00852 Glycosyltransferase family 10 (fucosyltransferase) TREPR_RS08130 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS08135 PF16363 TREPR_RS08135 TREPR_RS08140 PF16363 TREPR_RS08140 TREPR_RS08145 PF16363 TREPR_RS08145 TREPR_RS08150 PF04321 RmlD substrate binding domain TREPR_RS08155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TREPR_RS08160 PF00483 Nucleotidyl transferase TREPR_RS08170 PF00535 Glycosyl transferase family 2 TREPR_RS08180 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS08185 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS08190 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TREPR_RS08195 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREPR_RS08200 PF16363 TREPR_RS08200 TREPR_RS08205 PF00483 Nucleotidyl transferase TREPR_RS08220 PF14052 Capsule assembly protein Wzi TREPR_RS08225 PF01061 TREPR_RS08225 TREPR_RS08230 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS08235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TREPR_RS08235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TREPR_RS08235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TREPR_RS08240 PF00266 Aminotransferase class-V TREPR_RS08240 PF12804 MobA-like NTP transferase domain TREPR_RS08245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS08245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREPR_RS08250 PF01467 Cytidylyltransferase TREPR_RS08250 PF13714 Phosphoenolpyruvate phosphomutase TREPR_RS08260 PF01761 3-dehydroquinate synthase TREPR_RS08270 PF00941 FAD binding domain in molybdopterin dehydrogenase TREPR_RS08275 PF00111 2Fe-2S iron-sulfur cluster binding domain TREPR_RS08275 PF01799 [2Fe-2S] binding domain TREPR_RS08280 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TREPR_RS08280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase TREPR_RS08285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREPR_RS08290 PF02719 Polysaccharide biosynthesis protein TREPR_RS08290 PF13727 CoA-binding domain TREPR_RS08295 PF02357 Transcription termination factor nusG TREPR_RS08305 PF05036 Sporulation related domain TREPR_RS08310 PF01043 SecA preprotein cross-linking domain TREPR_RS08310 PF02810 SEC-C motif TREPR_RS08310 PF07516 SecA Wing and Scaffold domain TREPR_RS08310 PF07517 SecA DEAD-like domain TREPR_RS08330 PF00293 NUDIX domain TREPR_RS08335 PF01278 Omptin family TREPR_RS08345 PF13306 Leucine rich repeats (6 copies) TREPR_RS08350 PF00154 recA bacterial DNA recombination protein TREPR_RS08355 PF01546 Peptidase family M20/M25/M40 TREPR_RS08355 PF07687 Peptidase dimerisation domain TREPR_RS08360 PF02616 ScpA/B protein TREPR_RS08365 PF04079 Putative transcriptional regulators (Ypuh-like) TREPR_RS08370 PF00849 RNA pseudouridylate synthase TREPR_RS08370 PF01479 S4 domain TREPR_RS08375 PF00575 S1 RNA binding domain TREPR_RS08375 PF02224 Cytidylate kinase TREPR_RS08380 PF00158 Sigma-54 interaction domain TREPR_RS08380 PF02954 Bacterial regulatory protein, Fis family TREPR_RS08380 PF13185 GAF domain TREPR_RS08385 PF13432 Tetratricopeptide repeat TREPR_RS08395 PF00005 ABC transporter TREPR_RS08395 PF09383 NIL domain TREPR_RS08400 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS08405 PF03180 NLPA lipoprotein TREPR_RS08410 PF01546 Peptidase family M20/M25/M40 TREPR_RS08410 PF07687 Peptidase dimerisation domain TREPR_RS08415 PF04055 Radical SAM superfamily TREPR_RS08415 PF10105 TREPR_RS08415 TREPR_RS08420 PF01098 TREPR_RS08420 TREPR_RS08425 PF00905 Penicillin binding protein transpeptidase domain TREPR_RS08425 PF03717 Penicillin-binding Protein dimerisation domain TREPR_RS08430 PF04093 TREPR_RS08430 TREPR_RS08435 PF04085 rod shape-determining protein MreC TREPR_RS08440 PF06723 MreB/Mbl protein TREPR_RS08445 PF09976 Tetratricopeptide repeat TREPR_RS08455 PF02591 Putative zinc ribbon domain TREPR_RS08460 PF00140 Sigma-70 factor, region 1 TREPR_RS08460 PF03979 Sigma-70 factor, region 1 TREPR_RS08460 PF04539 Sigma-70 region 3 TREPR_RS08460 PF04542 Sigma-70 region 2 TREPR_RS08460 PF04545 Sigma-70, region 4 TREPR_RS08465 PF01807 CHC2 zinc finger TREPR_RS08465 PF08275 DNA primase catalytic core, N-terminal domain TREPR_RS08465 PF10410 DnaB-helicase binding domain of primase TREPR_RS08465 PF13662 Toprim domain TREPR_RS08470 PF02618 YceG-like family TREPR_RS08475 PF12706 Beta-lactamase superfamily domain TREPR_RS08480 PF03692 TREPR_RS08480 TREPR_RS08485 PF07556 TREPR_RS08485 TREPR_RS08495 PF00730 HhH-GPD superfamily base excision DNA repair protein TREPR_RS08500 PF02805 Metal binding domain of Ada TREPR_RS08500 PF12833 Helix-turn-helix domain TREPR_RS08505 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TREPR_RS08510 PF14257 TREPR_RS08510 TREPR_RS08515 PF00990 GGDEF domain TREPR_RS08520 PF04542 Sigma-70 region 2 TREPR_RS08520 PF08281 Sigma-70, region 4 TREPR_RS08525 PF01061 TREPR_RS08525 TREPR_RS08530 PF00005 ABC transporter TREPR_RS08540 PF13416 Bacterial extracellular solute-binding protein TREPR_RS08545 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS08550 PF00072 Response regulator receiver domain TREPR_RS08550 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS08550 PF07695 TREPR_RS08550 TREPR_RS08555 PF00072 Response regulator receiver domain TREPR_RS08555 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS08575 PF04773 FecR protein TREPR_RS08605 PF03683 TREPR_RS08605 TREPR_RS08615 PF12476 TREPR_RS08615 TREPR_RS08615 PF13175 AAA ATPase domain TREPR_RS08620 PF02384 N-6 DNA Methylase TREPR_RS08620 PF12161 HsdM N-terminal domain TREPR_RS08625 PF01420 Type I restriction modification DNA specificity domain TREPR_RS08630 PF13310 TREPR_RS08630 TREPR_RS08635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TREPR_RS08635 PF04851 Type III restriction enzyme, res subunit TREPR_RS08635 PF11867 TREPR_RS08635 TREPR_RS08640 PF13304 AAA domain TREPR_RS08640 PF13476 AAA domain TREPR_RS08645 PF03235 TREPR_RS08645 TREPR_RS08665 PF13020 TREPR_RS08665 TREPR_RS08670 PF00872 TREPR_RS08670 TREPR_RS08690 PF03288 Poxvirus D5 protein-like TREPR_RS08690 PF08706 TREPR_RS08690 TREPR_RS08705 PF12728 Helix-turn-helix domain TREPR_RS08715 PF00589 Phage integrase family TREPR_RS08735 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS08735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TREPR_RS08735 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS08740 PF00270 DEAD/DEAH box helicase TREPR_RS08740 PF00271 Helicase conserved C-terminal domain TREPR_RS08740 PF04408 Helicase associated domain (HA2) TREPR_RS08740 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TREPR_RS08745 PF04389 Peptidase family M28 TREPR_RS08755 PF00342 Phosphoglucose isomerase TREPR_RS08760 PF01316 Arginine repressor, DNA binding domain TREPR_RS08760 PF02863 Arginine repressor, C-terminal domain TREPR_RS08765 PF03961 TREPR_RS08765 TREPR_RS08770 PF05154 TREPR_RS08770 TREPR_RS08775 PF00488 MutS domain V TREPR_RS08775 PF01713 Smr domain TREPR_RS08780 PF03193 Protein of unknown function, DUF258 TREPR_RS08785 PF01177 Asp/Glu/Hydantoin racemase TREPR_RS08795 PF00805 Pentapeptide repeats (8 copies) TREPR_RS08795 PF13599 Pentapeptide repeats (9 copies) TREPR_RS08800 PF00753 Metallo-beta-lactamase superfamily TREPR_RS08820 PF02594 Uncharacterised ACR, YggU family COG1872 TREPR_RS08830 PF03269 TREPR_RS08830 TREPR_RS08835 PF00226 DnaJ domain TREPR_RS08845 PF13036 Protein of unknown function (DUF3897) TREPR_RS08850 PF00072 Response regulator receiver domain TREPR_RS08850 PF00158 Sigma-54 interaction domain TREPR_RS08850 PF02954 Bacterial regulatory protein, Fis family TREPR_RS08855 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS08855 PF13426 PAS domain TREPR_RS08860 PF07690 Major Facilitator Superfamily TREPR_RS08865 PF13581 Histidine kinase-like ATPase domain TREPR_RS08870 PF01740 STAS domain TREPR_RS08875 PF00672 HAMP domain TREPR_RS08875 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS08880 PF13177 DNA polymerase III, delta subunit TREPR_RS08885 PF02674 TREPR_RS08885 TREPR_RS08890 PF03033 Glycosyltransferase family 28 N-terminal domain TREPR_RS08890 PF04101 Glycosyltransferase family 28 C-terminal domain TREPR_RS08895 PF03358 NADPH-dependent FMN reductase TREPR_RS08910 PF01026 TatD related DNase TREPR_RS08915 PF01640 Peptidase C10 family TREPR_RS08920 PF00152 tRNA synthetases class II (D, K and N) TREPR_RS08920 PF01336 OB-fold nucleic acid binding domain TREPR_RS08925 PF00768 D-alanyl-D-alanine carboxypeptidase TREPR_RS08925 PF07943 Penicillin-binding protein 5, C-terminal domain TREPR_RS08935 PF01476 LysM domain TREPR_RS08935 PF01551 Peptidase family M23 TREPR_RS08940 PF00717 Peptidase S24-like TREPR_RS08945 PF00905 Penicillin binding protein transpeptidase domain TREPR_RS08945 PF03717 Penicillin-binding Protein dimerisation domain TREPR_RS08950 PF01973 TREPR_RS08950 TREPR_RS08955 PF00589 Phage integrase family TREPR_RS08955 PF13495 Phage integrase, N-terminal SAM-like domain TREPR_RS08980 PF13304 AAA domain TREPR_RS08990 PF03288 Poxvirus D5 protein-like TREPR_RS08990 PF08706 TREPR_RS08990 TREPR_RS09030 PF00877 NlpC/P60 family TREPR_RS09065 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS09065 PF16295 TREPR_RS09065 TREPR_RS09070 PF13534 4Fe-4S dicluster domain TREPR_RS09080 PF00106 short chain dehydrogenase TREPR_RS09085 PF00872 TREPR_RS09085 TREPR_RS09105 PF02661 Fic/DOC family TREPR_RS09120 PF08241 Methyltransferase domain TREPR_RS09130 PF14213 TREPR_RS09130 TREPR_RS09135 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS09140 PF05016 Plasmid stabilisation system protein TREPR_RS09145 PF00872 TREPR_RS09145 TREPR_RS09160 PF13487 HD domain TREPR_RS09165 PF00571 CBS domain TREPR_RS09165 PF01595 TREPR_RS09165 TREPR_RS09165 PF03471 Transporter associated domain TREPR_RS09170 PF00270 DEAD/DEAH box helicase TREPR_RS09170 PF00271 Helicase conserved C-terminal domain TREPR_RS09180 PF00474 Sodium:solute symporter family TREPR_RS09185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TREPR_RS09185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS09190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TREPR_RS09195 PF00501 AMP-binding enzyme TREPR_RS09195 PF14535 AMP-binding enzyme C-terminal domain TREPR_RS09200 PF09084 NMT1/THI5 like TREPR_RS09210 PF09084 NMT1/THI5 like TREPR_RS09215 PF04055 Radical SAM superfamily TREPR_RS09225 PF00005 ABC transporter TREPR_RS09230 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS09235 PF09084 NMT1/THI5 like TREPR_RS09240 PF09084 NMT1/THI5 like TREPR_RS09245 PF05935 Arylsulfotransferase (ASST) TREPR_RS09250 PF05935 Arylsulfotransferase (ASST) TREPR_RS09255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS09265 PF12911 TREPR_RS09265 TREPR_RS09270 PF00005 ABC transporter TREPR_RS09270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS09275 PF00005 ABC transporter TREPR_RS09275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS09280 PF00501 AMP-binding enzyme TREPR_RS09280 PF14535 AMP-binding enzyme C-terminal domain TREPR_RS09285 PF01842 ACT domain TREPR_RS09290 PF00534 Glycosyl transferases group 1 TREPR_RS09290 PF08323 Starch synthase catalytic domain TREPR_RS09295 PF08780 Nucleotidyltransferase substrate binding protein like TREPR_RS09300 PF01909 Nucleotidyltransferase domain TREPR_RS09330 PF07581 TREPR_RS09330 TREPR_RS09350 PF01797 Transposase IS200 like TREPR_RS09380 PF00877 NlpC/P60 family TREPR_RS09415 PF03288 Poxvirus D5 protein-like TREPR_RS09415 PF08706 TREPR_RS09415 TREPR_RS09435 PF12728 Helix-turn-helix domain TREPR_RS09445 PF03237 Terminase-like family TREPR_RS09450 PF04860 Phage portal protein TREPR_RS09460 PF04586 TREPR_RS09460 TREPR_RS09465 PF05065 Phage capsid family TREPR_RS09470 PF00589 Phage integrase family TREPR_RS09470 PF14659 Phage integrase, N-terminal SAM-like domain TREPR_RS09475 PF12245 Bacterial Ig-like domain (group 3) TREPR_RS09490 PF12245 Bacterial Ig-like domain (group 3) TREPR_RS09495 PF00571 CBS domain TREPR_RS09495 PF01595 TREPR_RS09495 TREPR_RS09495 PF03471 Transporter associated domain TREPR_RS09500 PF00293 NUDIX domain TREPR_RS09510 PF00817 impB/mucB/samB family TREPR_RS09515 PF00072 Response regulator receiver domain TREPR_RS09515 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS09515 PF01627 Hpt domain TREPR_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS09515 PF07494 Two component regulator propeller TREPR_RS09520 PF00072 Response regulator receiver domain TREPR_RS09520 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS09520 PF01627 Hpt domain TREPR_RS09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS09525 PF00072 Response regulator receiver domain TREPR_RS09525 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS09535 PF00293 NUDIX domain TREPR_RS09540 PF00872 TREPR_RS09540 TREPR_RS09575 PF03288 Poxvirus D5 protein-like TREPR_RS09575 PF08706 TREPR_RS09575 TREPR_RS09610 PF00877 NlpC/P60 family TREPR_RS09670 PF03883 TREPR_RS09670 TREPR_RS09680 PF02811 PHP domain TREPR_RS09680 PF07733 Bacterial DNA polymerase III alpha subunit TREPR_RS09680 PF14579 Helix-hairpin-helix motif TREPR_RS09685 PF00817 impB/mucB/samB family TREPR_RS09690 PF01904 Protein of unknown function DUF72 TREPR_RS09695 PF00717 Peptidase S24-like TREPR_RS09705 PF00271 Helicase conserved C-terminal domain TREPR_RS09705 PF04851 Type III restriction enzyme, res subunit TREPR_RS09705 PF13156 TREPR_RS09705 TREPR_RS09715 PF04266 ASCH domain TREPR_RS09725 PF05065 Phage capsid family TREPR_RS09730 PF04586 TREPR_RS09730 TREPR_RS09735 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS09740 PF04860 Phage portal protein TREPR_RS09745 PF03237 Terminase-like family TREPR_RS09755 PF12728 Helix-turn-helix domain TREPR_RS09760 PF00589 Phage integrase family TREPR_RS09770 PF12245 Bacterial Ig-like domain (group 3) TREPR_RS09790 PF01547 Bacterial extracellular solute-binding protein TREPR_RS09805 PF07859 alpha/beta hydrolase fold TREPR_RS09810 PF02643 Uncharacterized ACR, COG1430 TREPR_RS09820 PF00027 Cyclic nucleotide-binding domain TREPR_RS09825 PF01565 FAD binding domain TREPR_RS09825 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TREPR_RS09840 PF14346 Domain of unknown function (DUF4398) TREPR_RS09845 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TREPR_RS09845 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TREPR_RS09845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS09845 PF10371 Domain of unknown function TREPR_RS09845 PF12838 4Fe-4S dicluster domain TREPR_RS09845 PF17147 TREPR_RS09845 TREPR_RS09860 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS09865 PF00072 Response regulator receiver domain TREPR_RS09865 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS09870 PF00072 Response regulator receiver domain TREPR_RS09870 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS09870 PF01627 Hpt domain TREPR_RS09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS09870 PF07695 TREPR_RS09870 TREPR_RS09875 PF02811 PHP domain TREPR_RS09875 PF13263 PHP-associated TREPR_RS09880 PF13343 Bacterial extracellular solute-binding protein TREPR_RS09885 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS09890 PF00005 ABC transporter TREPR_RS09890 PF08402 TOBE domain TREPR_RS09900 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS09905 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS09910 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS09915 PF00005 ABC transporter TREPR_RS09920 PF13416 Bacterial extracellular solute-binding protein TREPR_RS09930 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS09930 PF13377 Periplasmic binding protein-like domain TREPR_RS09935 PF00294 pfkB family carbohydrate kinase TREPR_RS09940 PF02308 TREPR_RS09940 TREPR_RS09945 PF03819 MazG nucleotide pyrophosphohydrolase domain TREPR_RS09950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TREPR_RS09950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TREPR_RS09955 PF01195 Peptidyl-tRNA hydrolase TREPR_RS09960 PF02065 Melibiase TREPR_RS09965 PF00571 CBS domain TREPR_RS09965 PF01368 DHH family TREPR_RS09965 PF02833 DHHA2 domain TREPR_RS09965 PF07085 DRTGG domain TREPR_RS09970 PF13411 MerR HTH family regulatory protein TREPR_RS09975 PF00665 Integrase core domain TREPR_RS09975 PF13551 Winged helix-turn helix TREPR_RS09980 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS09985 PF02492 CobW/HypB/UreG, nucleotide-binding domain TREPR_RS09995 PF00005 ABC transporter TREPR_RS09995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS10000 PF00005 ABC transporter TREPR_RS10000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS10005 PF12911 TREPR_RS10005 TREPR_RS10010 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS10015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS10025 PF01243 Pyridoxamine 5'-phosphate oxidase TREPR_RS10035 PF00574 Clp protease TREPR_RS10040 PF02464 Competence-damaged protein TREPR_RS10045 PF04519 TREPR_RS10045 TREPR_RS10050 PF00072 Response regulator receiver domain TREPR_RS10055 PF00795 Carbon-nitrogen hydrolase TREPR_RS10060 PF00216 Bacterial DNA-binding protein TREPR_RS10065 PF01649 Ribosomal protein S20 TREPR_RS10070 PF02502 Ribose/Galactose Isomerase TREPR_RS10075 PF01325 Iron dependent repressor, N-terminal DNA binding domain TREPR_RS10075 PF02742 Iron dependent repressor, metal binding and dimerisation domain TREPR_RS10080 PF01189 NOL1/NOP2/sun family TREPR_RS10085 PF01416 tRNA pseudouridine synthase TREPR_RS10090 PF09986 TREPR_RS10090 TREPR_RS10095 PF01648 4'-phosphopantetheinyl transferase superfamily TREPR_RS10100 PF07949 YbbR-like protein TREPR_RS10105 PF02457 DisA bacterial checkpoint controller nucleotide-binding TREPR_RS10110 PF02779 Transketolase, pyrimidine binding domain TREPR_RS10110 PF02780 Transketolase, C-terminal domain TREPR_RS10110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TREPR_RS10120 PF00669 Bacterial flagellin N-terminal helical region TREPR_RS10120 PF00700 Bacterial flagellin C-terminal helical region TREPR_RS10125 PF00669 Bacterial flagellin N-terminal helical region TREPR_RS10125 PF00700 Bacterial flagellin C-terminal helical region TREPR_RS10130 PF03646 FlaG protein TREPR_RS10135 PF02465 TREPR_RS10135 TREPR_RS10135 PF07195 TREPR_RS10135 TREPR_RS10145 PF07238 PilZ domain TREPR_RS10145 PF12945 Flagellar protein YcgR TREPR_RS10155 PF02367 Uncharacterised P-loop hydrolase UPF0079 TREPR_RS10160 PF00814 Glycoprotease family TREPR_RS10165 PF01966 HD domain TREPR_RS10170 PF02599 Global regulator protein family TREPR_RS10175 PF02623 FliW protein TREPR_RS10180 PF00669 Bacterial flagellin N-terminal helical region TREPR_RS10180 PF00700 Bacterial flagellin C-terminal helical region TREPR_RS10180 PF07196 Flagellin hook IN motif TREPR_RS10185 PF00460 Flagella basal body rod protein TREPR_RS10185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TREPR_RS10200 PF03358 NADPH-dependent FMN reductase TREPR_RS10210 PF01553 Acyltransferase TREPR_RS10215 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS10220 PF00270 DEAD/DEAH box helicase TREPR_RS10220 PF00271 Helicase conserved C-terminal domain TREPR_RS10220 PF02559 CarD-like/TRCF domain TREPR_RS10220 PF03461 TRCF domain TREPR_RS10255 PF00665 Integrase core domain TREPR_RS10255 PF13551 Winged helix-turn helix TREPR_RS10290 PF01706 FliG C-terminal domain TREPR_RS10290 PF13855 Leucine rich repeat TREPR_RS10305 PF11074 TREPR_RS10305 TREPR_RS10330 PF02154 Flagellar motor switch protein FliM TREPR_RS10335 PF13475 TREPR_RS10335 TREPR_RS10355 PF00072 Response regulator receiver domain TREPR_RS10355 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS10355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS10355 PF02743 Cache domain TREPR_RS10360 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS10370 PF14213 TREPR_RS10370 TREPR_RS10380 PF13280 TREPR_RS10380 TREPR_RS10420 PF02452 PemK-like protein TREPR_RS10435 PF00072 Response regulator receiver domain TREPR_RS10435 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS10440 PF13350 Tyrosine phosphatase family TREPR_RS10445 PF03167 Uracil DNA glycosylase superfamily TREPR_RS10455 PF07719 Tetratricopeptide repeat TREPR_RS10455 PF13181 Tetratricopeptide repeat TREPR_RS10455 PF13475 TREPR_RS10455 TREPR_RS10460 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS10465 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS10470 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS10475 PF00069 Protein kinase domain TREPR_RS10480 PF00092 von Willebrand factor type A domain TREPR_RS10485 PF13672 Protein phosphatase 2C TREPR_RS10505 PF01226 Formate/nitrite transporter TREPR_RS10515 PF00919 Uncharacterized protein family UPF0004 TREPR_RS10515 PF04055 Radical SAM superfamily TREPR_RS10520 PF13181 Tetratricopeptide repeat TREPR_RS10525 PF04519 TREPR_RS10525 TREPR_RS10530 PF01515 Phosphate acetyl/butaryl transferase TREPR_RS10535 PF04205 FMN-binding domain TREPR_RS10540 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS10540 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS10550 PF01368 DHH family TREPR_RS10550 PF02272 DHHA1 domain TREPR_RS10560 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS10560 PF02151 UvrB/uvrC motif TREPR_RS10560 PF02861 Clp amino terminal domain TREPR_RS10560 PF07724 AAA domain (Cdc48 subfamily) TREPR_RS10560 PF10431 C-terminal, D2-small domain, of ClpB protein TREPR_RS10565 PF00483 Nucleotidyl transferase TREPR_RS10570 PF00270 DEAD/DEAH box helicase TREPR_RS10570 PF00271 Helicase conserved C-terminal domain TREPR_RS10570 PF09369 TREPR_RS10570 TREPR_RS10575 PF13482 RNase_H superfamily TREPR_RS10580 PF00583 Acetyltransferase (GNAT) family TREPR_RS10585 PF01330 RuvA N terminal domain TREPR_RS10585 PF14520 Helix-hairpin-helix domain TREPR_RS10590 PF13280 TREPR_RS10590 TREPR_RS10595 PF00140 Sigma-70 factor, region 1 TREPR_RS10595 PF04539 Sigma-70 region 3 TREPR_RS10595 PF04542 Sigma-70 region 2 TREPR_RS10595 PF04545 Sigma-70, region 4 TREPR_RS10600 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS10610 PF00149 Calcineurin-like phosphoesterase TREPR_RS10620 PF01981 Peptidyl-tRNA hydrolase PTH2 TREPR_RS10625 PF03747 ADP-ribosylglycohydrolase TREPR_RS10630 PF12705 PD-(D/E)XK nuclease superfamily TREPR_RS10635 PF00580 UvrD/REP helicase N-terminal domain TREPR_RS10635 PF12705 PD-(D/E)XK nuclease superfamily TREPR_RS10635 PF13361 UvrD-like helicase C-terminal domain TREPR_RS10645 PF03235 TREPR_RS10645 TREPR_RS10650 PF03235 TREPR_RS10650 TREPR_RS10650 PF07510 TREPR_RS10650 TREPR_RS10670 PF04221 RelB antitoxin TREPR_RS10675 PF05491 Holliday junction DNA helicase ruvB C-terminus TREPR_RS10675 PF05496 Holliday junction DNA helicase ruvB N-terminus TREPR_RS10680 PF02547 Queuosine biosynthesis protein TREPR_RS10690 PF00128 Alpha amylase, catalytic domain TREPR_RS10690 PF02903 Alpha amylase, N-terminal ig-like domain TREPR_RS10695 PF05161 MOFRL family TREPR_RS10695 PF13660 Domain of unknown function (DUF4147) TREPR_RS10705 PF00128 Alpha amylase, catalytic domain TREPR_RS10710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TREPR_RS10715 PF13598 TREPR_RS10715 TREPR_RS10720 PF00501 AMP-binding enzyme TREPR_RS10720 PF13193 AMP-binding enzyme C-terminal domain TREPR_RS10725 PF01381 Helix-turn-helix TREPR_RS10725 PF07883 Cupin domain TREPR_RS10730 PF01487 Type I 3-dehydroquinase TREPR_RS10730 PF08501 Shikimate dehydrogenase substrate binding domain TREPR_RS10740 PF02388 FemAB family TREPR_RS10745 PF01588 Putative tRNA binding domain TREPR_RS10745 PF09334 tRNA synthetases class I (M) TREPR_RS10750 PF13173 AAA domain TREPR_RS10750 PF13635 TREPR_RS10750 TREPR_RS10770 PF00849 RNA pseudouridylate synthase TREPR_RS10780 PF00005 ABC transporter TREPR_RS10780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS10785 PF00005 ABC transporter TREPR_RS10785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS10790 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS10795 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS10795 PF12911 TREPR_RS10795 TREPR_RS10800 PF00557 Metallopeptidase family M24 TREPR_RS10800 PF01321 Creatinase/Prolidase N-terminal domain TREPR_RS10805 PF07969 Amidohydrolase family TREPR_RS10810 PF01244 Membrane dipeptidase (Peptidase family M19) TREPR_RS10815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS10820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS10820 PF12728 Helix-turn-helix domain TREPR_RS10825 PF01814 Hemerythrin HHE cation binding domain TREPR_RS10830 PF00117 Glutamine amidotransferase class-I TREPR_RS10830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TREPR_RS10835 PF02142 MGS-like domain TREPR_RS10835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TREPR_RS10835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TREPR_RS10845 PF00330 Aconitase family (aconitate hydratase) TREPR_RS10850 PF02687 TREPR_RS10850 TREPR_RS10850 PF12704 MacB-like periplasmic core domain TREPR_RS10855 PF00005 ABC transporter TREPR_RS10860 PF02687 TREPR_RS10860 TREPR_RS10860 PF12704 MacB-like periplasmic core domain TREPR_RS10870 PF00448 SRP54-type protein, GTPase domain TREPR_RS10875 PF08308 TREPR_RS10875 TREPR_RS10880 PF00472 RF-1 domain TREPR_RS10880 PF03462 PCRF domain TREPR_RS10885 PF09924 Uncharacterized conserved protein (DUF2156) TREPR_RS10890 PF03739 TREPR_RS10890 TREPR_RS10895 PF03739 TREPR_RS10895 TREPR_RS10900 PF00692 dUTPase TREPR_RS10905 PF00013 KH domain TREPR_RS10905 PF00575 S1 RNA binding domain TREPR_RS10905 PF01138 3' exoribonuclease family, domain 1 TREPR_RS10905 PF03725 3' exoribonuclease family, domain 2 TREPR_RS10905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TREPR_RS10910 PF00312 Ribosomal protein S15 TREPR_RS10915 PF06574 FAD synthetase TREPR_RS10920 PF01509 TruB family pseudouridylate synthase (N terminal domain) TREPR_RS10925 PF02033 Ribosome-binding factor A TREPR_RS10930 PF00009 Elongation factor Tu GTP binding domain TREPR_RS10930 PF04760 Translation initiation factor IF-2, N-terminal region TREPR_RS10930 PF11987 Translation-initiation factor 2 TREPR_RS10935 PF00575 S1 RNA binding domain TREPR_RS10935 PF08529 NusA N-terminal domain TREPR_RS10935 PF13184 NusA-like KH domain TREPR_RS10935 PF13248 TREPR_RS10935 TREPR_RS10940 PF02576 Uncharacterised BCR, YhbC family COG0779 TREPR_RS10955 PF03065 Glycosyl hydrolase family 57 TREPR_RS10955 PF09094 Domain of unknown function (DUF1925) TREPR_RS10955 PF09095 Domain of unknown function (DUF1926) TREPR_RS10975 PF03116 TREPR_RS10975 TREPR_RS10980 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREPR_RS10980 PF11973 TREPR_RS10980 TREPR_RS10980 PF13183 4Fe-4S dicluster domain TREPR_RS10980 PF13375 RnfC Barrel sandwich hybrid domain TREPR_RS10990 PF02681 TREPR_RS10990 TREPR_RS10995 PF00849 RNA pseudouridylate synthase TREPR_RS11000 PF00149 Calcineurin-like phosphoesterase TREPR_RS11000 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS11005 PF00557 Metallopeptidase family M24 TREPR_RS11005 PF01321 Creatinase/Prolidase N-terminal domain TREPR_RS11020 PF14898 TREPR_RS11020 TREPR_RS11025 PF01743 Poly A polymerase head domain TREPR_RS11025 PF12627 Probable RNA and SrmB- binding site of polymerase A TREPR_RS11030 PF12146 Putative lysophospholipase TREPR_RS11035 PF05175 Methyltransferase small domain TREPR_RS11045 PF05163 DinB family TREPR_RS11050 PF05036 Sporulation related domain TREPR_RS11060 PF00919 Uncharacterized protein family UPF0004 TREPR_RS11060 PF01938 TRAM domain TREPR_RS11060 PF04055 Radical SAM superfamily TREPR_RS11075 PF03602 Conserved hypothetical protein 95 TREPR_RS11085 PF13174 Tetratricopeptide repeat TREPR_RS11085 PF13181 Tetratricopeptide repeat TREPR_RS11085 PF14559 Tetratricopeptide repeat TREPR_RS11090 PF04055 Radical SAM superfamily TREPR_RS11090 PF13394 4Fe-4S single cluster domain TREPR_RS11095 PF00156 Phosphoribosyl transferase domain TREPR_RS11095 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TREPR_RS11100 PF13432 Tetratricopeptide repeat TREPR_RS11105 PF13174 Tetratricopeptide repeat TREPR_RS11105 PF13432 Tetratricopeptide repeat TREPR_RS11110 PF00834 Ribulose-phosphate 3 epimerase family TREPR_RS11115 PF13181 Tetratricopeptide repeat TREPR_RS11120 PF01272 Transcription elongation factor, GreA/GreB, C-term TREPR_RS11120 PF03449 Transcription elongation factor, N-terminal TREPR_RS11125 PF03130 PBS lyase HEAT-like repeat TREPR_RS11125 PF13646 HEAT repeats TREPR_RS11130 PF01702 Queuine tRNA-ribosyltransferase TREPR_RS11140 PF13350 Tyrosine phosphatase family TREPR_RS11150 PF00072 Response regulator receiver domain TREPR_RS11150 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS11150 PF01627 Hpt domain TREPR_RS11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS11150 PF02743 Cache domain TREPR_RS11155 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS11160 PF13416 Bacterial extracellular solute-binding protein TREPR_RS11170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS11170 PF00672 HAMP domain TREPR_RS11175 PF00072 Response regulator receiver domain TREPR_RS11175 PF13487 HD domain TREPR_RS11180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain TREPR_RS11180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain TREPR_RS11180 PF14697 4Fe-4S dicluster domain TREPR_RS11185 PF00175 Oxidoreductase NAD-binding domain TREPR_RS11185 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TREPR_RS11190 PF17179 TREPR_RS11190 TREPR_RS11195 PF00027 Cyclic nucleotide-binding domain TREPR_RS11195 PF13545 Crp-like helix-turn-helix domain TREPR_RS11205 PF00005 ABC transporter TREPR_RS11210 PF02653 TREPR_RS11210 TREPR_RS11215 PF04392 ABC transporter substrate binding protein TREPR_RS11220 PF05016 Plasmid stabilisation system protein TREPR_RS11225 PF04221 RelB antitoxin TREPR_RS11230 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 TREPR_RS11230 PF13432 Tetratricopeptide repeat TREPR_RS11230 PF14559 Tetratricopeptide repeat TREPR_RS11235 PF00571 CBS domain TREPR_RS11235 PF03471 Transporter associated domain TREPR_RS11240 PF02130 Uncharacterized protein family UPF0054 TREPR_RS11245 PF01966 HD domain TREPR_RS11245 PF07697 TREPR_RS11245 TREPR_RS11245 PF07698 TREPR_RS11245 TREPR_RS11250 PF02562 PhoH-like protein TREPR_RS11255 PF00842 Alanine racemase, C-terminal domain TREPR_RS11255 PF01168 Alanine racemase, N-terminal domain TREPR_RS11260 PF04290 TREPR_RS11260 TREPR_RS11260 PF06808 TREPR_RS11260 TREPR_RS11265 PF03480 Bacterial extracellular solute-binding protein, family 7 TREPR_RS11270 PF16811 TREPR_RS11270 TREPR_RS11275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TREPR_RS11275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TREPR_RS11275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TREPR_RS11275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TREPR_RS11280 PF13650 Aspartyl protease TREPR_RS11290 PF04277 TREPR_RS11290 TREPR_RS11295 PF00364 Biotin-requiring enzyme TREPR_RS11295 PF00682 HMGL-like TREPR_RS11295 PF02436 Conserved carboxylase domain TREPR_RS11300 PF03977 TREPR_RS11300 TREPR_RS11310 PF01497 Periplasmic binding protein TREPR_RS11315 PF01032 FecCD transport family TREPR_RS11320 PF00005 ABC transporter TREPR_RS11325 PF01497 Periplasmic binding protein TREPR_RS11330 PF00994 Probable molybdopterin binding domain TREPR_RS11330 PF03453 MoeA N-terminal region (domain I and II) TREPR_RS11335 PF02687 TREPR_RS11335 TREPR_RS11340 PF00005 ABC transporter TREPR_RS11345 PF13387 TREPR_RS11345 TREPR_RS11350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS11350 PF00672 HAMP domain TREPR_RS11350 PF02743 Cache domain TREPR_RS11370 PF01584 CheW-like domain TREPR_RS11380 PF00072 Response regulator receiver domain TREPR_RS11380 PF01339 CheB methylesterase TREPR_RS11385 PF01739 CheR methyltransferase, SAM binding domain TREPR_RS11390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS11390 PF00672 HAMP domain TREPR_RS11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS11400 PF00072 Response regulator receiver domain TREPR_RS11400 PF01584 CheW-like domain TREPR_RS11400 PF01627 Hpt domain TREPR_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS11410 PF13616 PPIC-type PPIASE domain TREPR_RS11415 PF01590 GAF domain TREPR_RS11415 PF01966 HD domain TREPR_RS11420 PF02639 TREPR_RS11420 TREPR_RS11425 PF01238 Phosphomannose isomerase type I TREPR_RS11430 PF05164 Cell division protein ZapA TREPR_RS11435 PF06005 Protein of unknown function (DUF904) TREPR_RS11440 PF00453 Ribosomal protein L20 TREPR_RS11445 PF01632 Ribosomal protein L35 TREPR_RS11450 PF00707 Translation initiation factor IF-3, C-terminal domain TREPR_RS11450 PF05198 Translation initiation factor IF-3, N-terminal domain TREPR_RS11460 PF00691 OmpA family TREPR_RS11460 PF13860 FlgD Ig-like domain TREPR_RS11465 PF13306 Leucine rich repeats (6 copies) TREPR_RS11470 PF04754 TREPR_RS11470 TREPR_RS11475 PF12245 Bacterial Ig-like domain (group 3) TREPR_RS11480 PF00330 Aconitase family (aconitate hydratase) TREPR_RS11485 PF00694 Aconitase C-terminal domain TREPR_RS11490 PF08843 Nucleotidyl transferase of unknown function (DUF1814) TREPR_RS11495 PF13338 TREPR_RS11495 TREPR_RS11500 PF00072 Response regulator receiver domain TREPR_RS11500 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS11500 PF00672 HAMP domain TREPR_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS11505 PF13279 Thioesterase-like superfamily TREPR_RS11510 PF00571 CBS domain TREPR_RS11510 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS11515 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS11525 PF00535 Glycosyl transferase family 2 TREPR_RS11530 PF01406 tRNA synthetases class I (C) catalytic domain TREPR_RS11530 PF09190 DALR domain TREPR_RS11535 PF04542 Sigma-70 region 2 TREPR_RS11535 PF08281 Sigma-70, region 4 TREPR_RS11540 PF13490 Putative zinc-finger TREPR_RS11550 PF01833 IPT/TIG domain TREPR_RS11550 PF01841 Transglutaminase-like superfamily TREPR_RS11555 PF00696 Amino acid kinase family TREPR_RS11560 PF00365 Phosphofructokinase TREPR_RS11565 PF00270 DEAD/DEAH box helicase TREPR_RS11565 PF00271 Helicase conserved C-terminal domain TREPR_RS11565 PF00570 HRDC domain TREPR_RS11565 PF09382 RQC domain TREPR_RS11565 PF16124 TREPR_RS11565 TREPR_RS11570 PF01725 Ham1 family TREPR_RS11575 PF06695 TREPR_RS11575 TREPR_RS11580 PF00580 UvrD/REP helicase N-terminal domain TREPR_RS11580 PF13361 UvrD-like helicase C-terminal domain TREPR_RS11590 PF00571 CBS domain TREPR_RS11590 PF01368 DHH family TREPR_RS11595 PF00392 Bacterial regulatory proteins, gntR family TREPR_RS11595 PF07729 FCD domain TREPR_RS11600 PF04041 Domain of unknown function (DUF377) TREPR_RS11605 PF00232 Glycosyl hydrolase family 1 TREPR_RS11610 PF13416 Bacterial extracellular solute-binding protein TREPR_RS11615 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11620 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11625 PF00248 Aldo/keto reductase family TREPR_RS11630 PF00920 Dehydratase family TREPR_RS11635 PF00232 Glycosyl hydrolase family 1 TREPR_RS11640 PF00703 Glycosyl hydrolases family 2 TREPR_RS11645 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11655 PF13416 Bacterial extracellular solute-binding protein TREPR_RS11660 PF06165 Glycosyltransferase family 36 TREPR_RS11660 PF17167 TREPR_RS11660 TREPR_RS11665 PF00135 Carboxylesterase family TREPR_RS11695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS11695 PF00037 4Fe-4S binding domain TREPR_RS11695 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS11695 PF04060 Putative Fe-S cluster TREPR_RS11695 PF12837 4Fe-4S binding domain TREPR_RS11700 PF00009 Elongation factor Tu GTP binding domain TREPR_RS11700 PF00679 Elongation factor G C-terminus TREPR_RS11700 PF03144 Elongation factor Tu domain 2 TREPR_RS11700 PF03764 Elongation factor G, domain IV TREPR_RS11700 PF14492 Elongation Factor G, domain II TREPR_RS11710 PF00072 Response regulator receiver domain TREPR_RS11710 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS11710 PF00672 HAMP domain TREPR_RS11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS11710 PF08448 PAS fold TREPR_RS11710 PF13426 PAS domain TREPR_RS11715 PF02195 ParB-like nuclease domain TREPR_RS11720 PF00905 Penicillin binding protein transpeptidase domain TREPR_RS11720 PF00912 Transglycosylase TREPR_RS11725 PF03358 NADPH-dependent FMN reductase TREPR_RS11735 PF01551 Peptidase family M23 TREPR_RS11740 PF03065 Glycosyl hydrolase family 57 TREPR_RS11740 PF09210 Domain of unknown function (DUF1957) TREPR_RS11745 PF16258 TREPR_RS11745 TREPR_RS11750 PF03358 NADPH-dependent FMN reductase TREPR_RS11755 PF00672 HAMP domain TREPR_RS11755 PF07228 Stage II sporulation protein E (SpoIIE) TREPR_RS11760 PF12832 MFS_1 like family TREPR_RS11765 PF02557 D-alanyl-D-alanine carboxypeptidase TREPR_RS11775 PF00133 tRNA synthetases class I (I, L, M and V) TREPR_RS11775 PF08264 Anticodon-binding domain of tRNA TREPR_RS11775 PF10458 Valyl tRNA synthetase tRNA binding arm TREPR_RS11780 PF01554 MatE TREPR_RS11790 PF13520 Amino acid permease TREPR_RS11795 PF02492 CobW/HypB/UreG, nucleotide-binding domain TREPR_RS11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TREPR_RS11805 PF03466 LysR substrate binding domain TREPR_RS11810 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS11815 PF07690 Major Facilitator Superfamily TREPR_RS11820 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS11825 PF00809 Pterin binding enzyme TREPR_RS11830 PF02310 B12 binding domain TREPR_RS11830 PF02607 B12 binding domain TREPR_RS11835 PF10050 TREPR_RS11835 TREPR_RS11840 PF00111 2Fe-2S iron-sulfur cluster binding domain TREPR_RS11840 PF14574 Domain of unknown function (DUF4445) TREPR_RS11845 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS11850 PF13556 PucR C-terminal helix-turn-helix domain TREPR_RS11855 PF13556 PucR C-terminal helix-turn-helix domain TREPR_RS11860 PF02401 LytB protein TREPR_RS11865 PF02355 Protein export membrane protein TREPR_RS11870 PF02355 Protein export membrane protein TREPR_RS11870 PF07549 SecD/SecF GG Motif TREPR_RS11875 PF02699 Preprotein translocase subunit TREPR_RS11885 PF00301 Rubredoxin TREPR_RS11890 PF02915 Rubrerythrin TREPR_RS11900 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS11920 PF01464 Transglycosylase SLT domain TREPR_RS11920 PF01476 LysM domain TREPR_RS11930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS11935 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11940 PF00005 ABC transporter TREPR_RS11940 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS11940 PF12911 TREPR_RS11940 TREPR_RS11945 PF00005 ABC transporter TREPR_RS11945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS11955 PF00005 ABC transporter TREPR_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS11965 PF13416 Bacterial extracellular solute-binding protein TREPR_RS11970 PF00270 DEAD/DEAH box helicase TREPR_RS11970 PF00271 Helicase conserved C-terminal domain TREPR_RS11975 PF00005 ABC transporter TREPR_RS11975 PF12848 ABC transporter TREPR_RS11980 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS11985 PF13407 Periplasmic binding protein domain TREPR_RS11990 PF02653 TREPR_RS11990 TREPR_RS11995 PF00005 ABC transporter TREPR_RS12005 PF13174 Tetratricopeptide repeat TREPR_RS12015 PF00294 pfkB family carbohydrate kinase TREPR_RS12020 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS12020 PF13377 Periplasmic binding protein-like domain TREPR_RS12025 PF02056 Family 4 glycosyl hydrolase TREPR_RS12025 PF11975 Family 4 glycosyl hydrolase C-terminal domain TREPR_RS12030 PF13343 Bacterial extracellular solute-binding protein TREPR_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12040 PF00005 ABC transporter TREPR_RS12040 PF08402 TOBE domain TREPR_RS12055 PF00472 RF-1 domain TREPR_RS12055 PF03462 PCRF domain TREPR_RS12060 PF05175 Methyltransferase small domain TREPR_RS12065 PF02824 TGS domain TREPR_RS12065 PF04607 Region found in RelA / SpoT proteins TREPR_RS12065 PF13328 HD domain TREPR_RS12075 PF01196 Ribosomal protein L17 TREPR_RS12080 PF01000 RNA polymerase Rpb3/RpoA insert domain TREPR_RS12080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TREPR_RS12080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TREPR_RS12085 PF00163 Ribosomal protein S4/S9 N-terminal domain TREPR_RS12085 PF01479 S4 domain TREPR_RS12090 PF00411 Ribosomal protein S11 TREPR_RS12095 PF00416 Ribosomal protein S13/S18 TREPR_RS12100 PF00344 SecY translocase TREPR_RS12105 PF00828 Ribosomal protein L18e/L15 TREPR_RS12110 PF00327 Ribosomal protein L30p/L7e TREPR_RS12115 PF00333 Ribosomal protein S5, N-terminal domain TREPR_RS12115 PF03719 Ribosomal protein S5, C-terminal domain TREPR_RS12120 PF00861 Ribosomal L18p/L5e family TREPR_RS12125 PF00347 Ribosomal protein L6 TREPR_RS12130 PF00410 Ribosomal protein S8 TREPR_RS12140 PF00467 KOW motif TREPR_RS12140 PF17136 TREPR_RS12140 TREPR_RS12145 PF00238 Ribosomal protein L14p/L23e TREPR_RS12150 PF00366 Ribosomal protein S17 TREPR_RS12155 PF00831 Ribosomal L29 protein TREPR_RS12160 PF00252 Ribosomal protein L16p/L10e TREPR_RS12165 PF00189 Ribosomal protein S3, C-terminal domain TREPR_RS12165 PF07650 KH domain TREPR_RS12170 PF00237 Ribosomal protein L22p/L17e TREPR_RS12175 PF00203 Ribosomal protein S19 TREPR_RS12180 PF00181 Ribosomal Proteins L2, RNA binding domain TREPR_RS12180 PF03947 Ribosomal Proteins L2, C-terminal domain TREPR_RS12185 PF00276 Ribosomal protein L23 TREPR_RS12190 PF00573 Ribosomal protein L4/L1 family TREPR_RS12195 PF00297 Ribosomal protein L3 TREPR_RS12200 PF00338 Ribosomal protein S10p/S20e TREPR_RS12205 PF00009 Elongation factor Tu GTP binding domain TREPR_RS12205 PF03143 Elongation factor Tu C-terminal domain TREPR_RS12205 PF03144 Elongation factor Tu domain 2 TREPR_RS12215 PF00177 Ribosomal protein S7p/S5e TREPR_RS12220 PF00164 Ribosomal protein S12/S23 TREPR_RS12225 PF05016 Plasmid stabilisation system protein TREPR_RS12230 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS12235 PF00005 ABC transporter TREPR_RS12235 PF08402 TOBE domain TREPR_RS12240 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12245 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12250 PF13416 Bacterial extracellular solute-binding protein TREPR_RS12265 PF13229 Right handed beta helix region TREPR_RS12270 PF01814 Hemerythrin HHE cation binding domain TREPR_RS12275 PF01432 Peptidase family M3 TREPR_RS12275 PF08439 Oligopeptidase F TREPR_RS12280 PF03168 Late embryogenesis abundant protein TREPR_RS12285 PF01132 Elongation factor P (EF-P) OB domain TREPR_RS12285 PF08207 Elongation factor P (EF-P) KOW-like domain TREPR_RS12285 PF09285 Elongation factor P, C-terminal TREPR_RS12290 PF05175 Methyltransferase small domain TREPR_RS12295 PF04205 FMN-binding domain TREPR_RS12300 PF00005 ABC transporter TREPR_RS12305 PF02687 TREPR_RS12305 TREPR_RS12305 PF12704 MacB-like periplasmic core domain TREPR_RS12310 PF02687 TREPR_RS12310 TREPR_RS12310 PF12704 MacB-like periplasmic core domain TREPR_RS12315 PF10080 TREPR_RS12315 TREPR_RS12320 PF10634 Fe2+ transport protein TREPR_RS12325 PF03239 TREPR_RS12325 TREPR_RS12330 PF09957 TREPR_RS12330 TREPR_RS12335 PF01850 PIN domain TREPR_RS12340 PF07171 MlrC C-terminus TREPR_RS12340 PF07364 Protein of unknown function (DUF1485) TREPR_RS12345 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12350 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12355 PF13416 Bacterial extracellular solute-binding protein TREPR_RS12360 PF16011 TREPR_RS12360 TREPR_RS12365 PF04221 RelB antitoxin TREPR_RS12370 PF06769 Plasmid encoded toxin Txe TREPR_RS12405 PF01381 Helix-turn-helix TREPR_RS12425 PF16576 TREPR_RS12425 TREPR_RS12430 PF00005 ABC transporter TREPR_RS12435 PF02687 TREPR_RS12435 TREPR_RS12435 PF12704 MacB-like periplasmic core domain TREPR_RS12440 PF00375 Sodium:dicarboxylate symporter family TREPR_RS12445 PF00156 Phosphoribosyl transferase domain TREPR_RS12450 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS12455 PF04014 Antidote-toxin recognition MazE TREPR_RS12460 PF02452 PemK-like protein TREPR_RS12465 PF13432 Tetratricopeptide repeat TREPR_RS12470 PF13432 Tetratricopeptide repeat TREPR_RS12480 PF01850 PIN domain TREPR_RS12500 PF05015 Plasmid maintenance system killer protein TREPR_RS12505 PF01381 Helix-turn-helix TREPR_RS12515 PF00041 Fibronectin type III domain TREPR_RS12515 PF12733 TREPR_RS12515 TREPR_RS12520 PF08282 haloacid dehalogenase-like hydrolase TREPR_RS12525 PF12245 Bacterial Ig-like domain (group 3) TREPR_RS12535 PF01478 Type IV leader peptidase family TREPR_RS12545 PF00437 Type II/IV secretion system protein TREPR_RS12550 PF00482 Type II secretion system (T2SS), protein F TREPR_RS12555 PF08334 Type II secretion system (T2SS), protein G TREPR_RS12610 PF00873 AcrB/AcrD/AcrF family TREPR_RS12615 PF16576 TREPR_RS12615 TREPR_RS12620 PF02321 Outer membrane efflux protein TREPR_RS12625 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS12630 PF00005 ABC transporter TREPR_RS12630 PF00664 ABC transporter transmembrane region TREPR_RS12635 PF00005 ABC transporter TREPR_RS12635 PF00664 ABC transporter transmembrane region TREPR_RS12640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS12645 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12650 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12650 PF12911 TREPR_RS12650 TREPR_RS12655 PF00005 ABC transporter TREPR_RS12655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS12660 PF00005 ABC transporter TREPR_RS12660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS12665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain TREPR_RS12665 PF13378 Enolase C-terminal domain-like TREPR_RS12670 PF01841 Transglutaminase-like superfamily TREPR_RS12675 PF01923 Cobalamin adenosyltransferase TREPR_RS12680 PF01411 tRNA synthetases class II (A) TREPR_RS12680 PF02272 DHHA1 domain TREPR_RS12680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_RS12685 PF00849 RNA pseudouridylate synthase TREPR_RS12690 PF09861 Domain of unknown function (DUF2088) TREPR_RS12695 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TREPR_RS12695 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TREPR_RS12700 PF01168 Alanine racemase, N-terminal domain TREPR_RS12715 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS12720 PF16552 TREPR_RS12720 TREPR_RS12725 PF02310 B12 binding domain TREPR_RS12725 PF09043 D-Lysine 5,6-aminomutase alpha subunit TREPR_RS12725 PF16554 TREPR_RS12725 TREPR_RS12730 PF13941 TREPR_RS12730 TREPR_RS12735 PF03553 TREPR_RS12735 TREPR_RS12740 PF00149 Calcineurin-like phosphoesterase TREPR_RS12740 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS12745 PF08282 haloacid dehalogenase-like hydrolase TREPR_RS12750 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS12755 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12760 PF00005 ABC transporter TREPR_RS12765 PF03313 TREPR_RS12765 TREPR_RS12770 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS12770 PF13377 Periplasmic binding protein-like domain TREPR_RS12775 PF00795 Carbon-nitrogen hydrolase TREPR_RS12775 PF02540 NAD synthase TREPR_RS12785 PF07523 Bacterial Ig-like domain (group 3) TREPR_RS12810 PF12706 Beta-lactamase superfamily domain TREPR_RS12815 PF00349 Hexokinase TREPR_RS12815 PF03727 Hexokinase TREPR_RS12820 PF00135 Carboxylesterase family TREPR_RS12825 PF00135 Carboxylesterase family TREPR_RS12830 PF00005 ABC transporter TREPR_RS12835 PF00005 ABC transporter TREPR_RS12840 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12845 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS12850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS12855 PF07907 TREPR_RS12855 TREPR_RS12860 PF00245 Alkaline phosphatase TREPR_RS12865 PF00933 Glycosyl hydrolase family 3 N terminal domain TREPR_RS12865 PF01915 Glycosyl hydrolase family 3 C-terminal domain TREPR_RS12870 PF01229 Glycosyl hydrolases family 39 TREPR_RS12870 PF12833 Helix-turn-helix domain TREPR_RS12875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TREPR_RS12880 PF00111 2Fe-2S iron-sulfur cluster binding domain TREPR_RS12885 PF00682 HMGL-like TREPR_RS12885 PF07836 DmpG-like communication domain TREPR_RS12890 PF01118 Semialdehyde dehydrogenase, NAD binding domain TREPR_RS12890 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation TREPR_RS12895 PF01557 Fumarylacetoacetate (FAA) hydrolase family TREPR_RS12900 PF00561 alpha/beta hydrolase fold TREPR_RS12910 PF00392 Bacterial regulatory proteins, gntR family TREPR_RS12910 PF07729 FCD domain TREPR_RS12915 PF01261 Xylose isomerase-like TIM barrel TREPR_RS12920 PF03480 Bacterial extracellular solute-binding protein, family 7 TREPR_RS12925 PF04290 TREPR_RS12925 TREPR_RS12930 PF06808 TREPR_RS12930 TREPR_RS12935 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS12940 PF00456 Transketolase, thiamine diphosphate binding domain TREPR_RS12945 PF02779 Transketolase, pyrimidine binding domain TREPR_RS12945 PF02780 Transketolase, C-terminal domain TREPR_RS12950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase TREPR_RS12950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase TREPR_RS12955 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase TREPR_RS12955 PF03802 TREPR_RS12955 TREPR_RS12960 PF05683 Fumarase C-terminus TREPR_RS12965 PF05681 TREPR_RS12965 TREPR_RS12975 PF05034 Methylaspartate ammonia-lyase N-terminus TREPR_RS12975 PF07476 Methylaspartate ammonia-lyase C-terminus TREPR_RS12980 PF06368 Methylaspartate mutase E chain (MutE) TREPR_RS12985 PF13941 TREPR_RS12985 TREPR_RS12990 PF02310 B12 binding domain TREPR_RS12995 PF01546 Peptidase family M20/M25/M40 TREPR_RS12995 PF07687 Peptidase dimerisation domain TREPR_RS13000 PF00392 Bacterial regulatory proteins, gntR family TREPR_RS13005 PF12733 TREPR_RS13005 TREPR_RS13010 PF12733 TREPR_RS13010 TREPR_RS13025 PF12784 TREPR_RS13025 TREPR_RS13035 PF00176 SNF2 family N-terminal domain TREPR_RS13035 PF00271 Helicase conserved C-terminal domain TREPR_RS13040 PF08238 Sel1 repeat TREPR_RS13040 PF14335 TREPR_RS13040 TREPR_RS13045 PF08218 Citrate lyase ligase C-terminal domain TREPR_RS13050 PF04223 Citrate lyase, alpha subunit (CitF) TREPR_RS13055 PF03328 HpcH/HpaI aldolase/citrate lyase family TREPR_RS13060 PF06857 TREPR_RS13060 TREPR_RS13065 PF01546 Peptidase family M20/M25/M40 TREPR_RS13075 PF16481 TREPR_RS13075 TREPR_RS13080 PF07722 Peptidase C26 TREPR_RS13085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TREPR_RS13085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TREPR_RS13090 PF00698 Acyl transferase domain TREPR_RS13095 PF13561 Enoyl-(Acyl carrier protein) reductase TREPR_RS13100 PF00109 Beta-ketoacyl synthase, N-terminal domain TREPR_RS13100 PF02801 Beta-ketoacyl synthase, C-terminal domain TREPR_RS13105 PF07977 FabA-like domain TREPR_RS13115 PF02086 D12 class N6 adenine-specific DNA methyltransferase TREPR_RS13125 PF00364 Biotin-requiring enzyme TREPR_RS13130 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain TREPR_RS13130 PF02785 Biotin carboxylase C-terminal domain TREPR_RS13130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TREPR_RS13135 PF01039 Carboxyl transferase domain TREPR_RS13140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TREPR_RS13145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TREPR_RS13145 PF02770 Acyl-CoA dehydrogenase, middle domain TREPR_RS13145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TREPR_RS13145 PF12186 Acyl-CoA dehydrogenase C terminal TREPR_RS13150 PF00766 Electron transfer flavoprotein FAD-binding domain TREPR_RS13150 PF01012 Electron transfer flavoprotein domain TREPR_RS13155 PF01012 Electron transfer flavoprotein domain TREPR_RS13160 PF13560 Helix-turn-helix domain TREPR_RS13165 PF07804 HipA-like C-terminal domain TREPR_RS13165 PF07805 HipA-like N-terminal domain TREPR_RS13170 PF00072 Response regulator receiver domain TREPR_RS13170 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS13175 PF00072 Response regulator receiver domain TREPR_RS13175 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13175 PF01627 Hpt domain TREPR_RS13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13180 PF00781 Diacylglycerol kinase catalytic domain TREPR_RS13185 PF00072 Response regulator receiver domain TREPR_RS13185 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13185 PF01627 Hpt domain TREPR_RS13185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13190 PF00072 Response regulator receiver domain TREPR_RS13190 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS13195 PF00072 Response regulator receiver domain TREPR_RS13195 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13195 PF01627 Hpt domain TREPR_RS13195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13195 PF07494 Two component regulator propeller TREPR_RS13195 PF07495 Y_Y_Y domain TREPR_RS13200 PF00072 Response regulator receiver domain TREPR_RS13200 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13205 PF00072 Response regulator receiver domain TREPR_RS13205 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13205 PF01627 Hpt domain TREPR_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13205 PF02743 Cache domain TREPR_RS13210 PF02608 Basic membrane protein TREPR_RS13215 PF02608 Basic membrane protein TREPR_RS13220 PF00072 Response regulator receiver domain TREPR_RS13220 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13220 PF01627 Hpt domain TREPR_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13225 PF00072 Response regulator receiver domain TREPR_RS13225 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13225 PF01627 Hpt domain TREPR_RS13225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13225 PF02743 Cache domain TREPR_RS13230 PF00072 Response regulator receiver domain TREPR_RS13230 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS13230 PF01627 Hpt domain TREPR_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS13235 PF01554 MatE TREPR_RS13240 PF00881 Nitroreductase family TREPR_RS13245 PF04439 Streptomycin adenylyltransferase TREPR_RS13250 PF01909 Nucleotidyltransferase domain TREPR_RS13265 PF12844 Helix-turn-helix domain TREPR_RS13270 PF05016 Plasmid stabilisation system protein TREPR_RS13275 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS13280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TREPR_RS13280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TREPR_RS13285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS13285 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS13290 PF00231 ATP synthase TREPR_RS13295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS13295 PF00306 ATP synthase alpha/beta chain, C terminal domain TREPR_RS13295 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS13300 PF00213 ATP synthase delta (OSCP) subunit TREPR_RS13305 PF00430 ATP synthase B/B' CF(0) TREPR_RS13310 PF00137 ATP synthase subunit C TREPR_RS13315 PF00119 ATP synthase A chain TREPR_RS13325 PF01053 Cys/Met metabolism PLP-dependent enzyme TREPR_RS13330 PF13303 TREPR_RS13330 TREPR_RS13335 PF00994 Probable molybdopterin binding domain TREPR_RS13340 PF03473 MOSC domain TREPR_RS13345 PF04055 Radical SAM superfamily TREPR_RS13345 PF06463 Molybdenum Cofactor Synthesis C TREPR_RS13345 PF13353 4Fe-4S single cluster domain TREPR_RS13350 PF01967 MoaC family TREPR_RS13360 PF03102 NeuB family TREPR_RS13360 PF08666 SAF domain TREPR_RS13365 PF13180 PDZ domain TREPR_RS13365 PF13365 Trypsin-like peptidase domain TREPR_RS13370 PF00557 Metallopeptidase family M24 TREPR_RS13375 PF00226 DnaJ domain TREPR_RS13385 PF00582 Universal stress protein family TREPR_RS13390 PF01813 ATP synthase subunit D TREPR_RS13395 PF02588 TREPR_RS13395 TREPR_RS13395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TREPR_RS13400 PF12801 TREPR_RS13400 TREPR_RS13415 PF00288 GHMP kinases N terminal domain TREPR_RS13415 PF08544 GHMP kinases C terminal TREPR_RS13420 PF04026 SpoVG TREPR_RS13430 PF01386 Ribosomal L25p family TREPR_RS13430 PF14693 Ribosomal protein TL5, C-terminal domain TREPR_RS13435 PF07690 Major Facilitator Superfamily TREPR_RS13440 PF12636 TREPR_RS13440 TREPR_RS13445 PF01047 MarR family TREPR_RS13450 PF01171 PP-loop family TREPR_RS13455 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS13455 PF01434 Peptidase family M41 TREPR_RS13455 PF06480 FtsH Extracellular TREPR_RS13465 PF13365 Trypsin-like peptidase domain TREPR_RS13470 PF12900 Pyridoxamine 5'-phosphate oxidase TREPR_RS13475 PF02452 PemK-like protein TREPR_RS13480 PF04014 Antidote-toxin recognition MazE TREPR_RS13490 PF13413 Helix-turn-helix domain TREPR_RS13495 PF00919 Uncharacterized protein family UPF0004 TREPR_RS13495 PF04055 Radical SAM superfamily TREPR_RS13500 PF00580 UvrD/REP helicase N-terminal domain TREPR_RS13500 PF13361 UvrD-like helicase C-terminal domain TREPR_RS13515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TREPR_RS13515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TREPR_RS13520 PF00155 Aminotransferase class I and II TREPR_RS13525 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS13530 PF01850 PIN domain TREPR_RS13535 PF00270 DEAD/DEAH box helicase TREPR_RS13535 PF00271 Helicase conserved C-terminal domain TREPR_RS13545 PF03793 PASTA domain TREPR_RS13550 PF00551 Formyl transferase TREPR_RS13550 PF02911 Formyl transferase, C-terminal domain TREPR_RS13555 PF01327 Polypeptide deformylase TREPR_RS13560 PF00483 Nucleotidyl transferase TREPR_RS13565 PF00871 Acetokinase family TREPR_RS13570 PF00011 Hsp20/alpha crystallin family TREPR_RS13580 PF00501 AMP-binding enzyme TREPR_RS13585 PF01875 Memo-like protein TREPR_RS13590 PF05670 TREPR_RS13590 TREPR_RS13590 PF05833 Fibronectin-binding protein A N-terminus (FbpA) TREPR_RS13595 PF00933 Glycosyl hydrolase family 3 N terminal domain TREPR_RS13600 PF00849 RNA pseudouridylate synthase TREPR_RS13615 PF04474 TREPR_RS13615 TREPR_RS13620 PF02561 Flagellar protein FliS TREPR_RS13625 PF05130 FlgN protein TREPR_RS13630 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system TREPR_RS13635 PF01850 PIN domain TREPR_RS13650 PF13650 Aspartyl protease TREPR_RS13655 PF12784 TREPR_RS13655 TREPR_RS13660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS13660 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS13665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TREPR_RS13665 PF02874 ATP synthase alpha/beta family, beta-barrel domain TREPR_RS13665 PF16886 TREPR_RS13665 TREPR_RS13675 PF01990 ATP synthase (F/14-kDa) subunit TREPR_RS13680 PF00137 ATP synthase subunit C TREPR_RS13685 PF01496 V-type ATPase 116kDa subunit family TREPR_RS13690 PF01992 ATP synthase (C/AC39) subunit TREPR_RS13700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS13705 PF03840 Preprotein translocase SecG subunit TREPR_RS13710 PF12727 PBP superfamily domain TREPR_RS13710 PF12728 Helix-turn-helix domain TREPR_RS13715 PF13343 Bacterial extracellular solute-binding protein TREPR_RS13720 PF00005 ABC transporter TREPR_RS13725 PF02492 CobW/HypB/UreG, nucleotide-binding domain TREPR_RS13730 PF08241 Methyltransferase domain TREPR_RS13745 PF02368 Bacterial Ig-like domain (group 2) TREPR_RS13750 PF00041 Fibronectin type III domain TREPR_RS13750 PF02872 5'-nucleotidase, C-terminal domain TREPR_RS13755 PF00593 TonB dependent receptor TREPR_RS13755 PF07715 TonB-dependent Receptor Plug Domain TREPR_RS13760 PF04016 Domain of unknown function (DUF364) TREPR_RS13760 PF13938 Domain of unknown function (DUF4213) TREPR_RS13765 PF03544 Gram-negative bacterial TonB protein C-terminal TREPR_RS13770 PF01497 Periplasmic binding protein TREPR_RS13775 PF01032 FecCD transport family TREPR_RS13780 PF00005 ABC transporter TREPR_RS13785 PF00571 CBS domain TREPR_RS13790 PF00005 ABC transporter TREPR_RS13795 PF00005 ABC transporter TREPR_RS13795 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREPR_RS13800 PF02653 TREPR_RS13800 TREPR_RS13805 PF02653 TREPR_RS13805 TREPR_RS13810 PF13458 Periplasmic binding protein TREPR_RS13815 PF03321 GH3 auxin-responsive promoter TREPR_RS13830 PF00924 Mechanosensitive ion channel TREPR_RS13835 PF07883 Cupin domain TREPR_RS13840 PF01380 SIS domain TREPR_RS13840 PF13522 Glutamine amidotransferase domain TREPR_RS13845 PF02887 Pyruvate kinase, alpha/beta domain TREPR_RS13855 PF01850 PIN domain TREPR_RS13865 PF00248 Aldo/keto reductase family TREPR_RS13865 PF13534 4Fe-4S dicluster domain TREPR_RS13870 PF01212 Beta-eliminating lyase TREPR_RS13875 PF00557 Metallopeptidase family M24 TREPR_RS13885 PF12706 Beta-lactamase superfamily domain TREPR_RS13890 PF08668 HDOD domain TREPR_RS13895 PF13432 Tetratricopeptide repeat TREPR_RS13895 PF14559 Tetratricopeptide repeat TREPR_RS13900 PF00041 Fibronectin type III domain TREPR_RS13900 PF13385 Concanavalin A-like lectin/glucanases superfamily TREPR_RS13905 PF01541 GIY-YIG catalytic domain TREPR_RS13905 PF02151 UvrB/uvrC motif TREPR_RS13905 PF08459 UvrC Helix-hairpin-helix N-terminal TREPR_RS13905 PF14520 Helix-hairpin-helix domain TREPR_RS13915 PF09455 CRISPR-associated (Cas) DxTHG family TREPR_RS13920 PF03787 RAMP superfamily TREPR_RS13930 PF03787 RAMP superfamily TREPR_RS13935 PF03750 TREPR_RS13935 TREPR_RS13945 PF10040 Uncharacterized conserved protein (DUF2276) TREPR_RS13955 PF05685 Putative restriction endonuclease TREPR_RS13960 PF04620 TREPR_RS13960 TREPR_RS13965 PF04620 TREPR_RS13965 TREPR_RS13975 PF01116 Fructose-bisphosphate aldolase class-II TREPR_RS13990 PF01569 PAP2 superfamily TREPR_RS13995 PF01926 50S ribosome-binding GTPase TREPR_RS13995 PF10396 GTP-binding protein TrmE N-terminus TREPR_RS13995 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE TREPR_RS14000 PF01134 Glucose inhibited division protein A TREPR_RS14000 PF13932 GidA associated domain 3 TREPR_RS14005 PF02537 TREPR_RS14005 TREPR_RS14010 PF01230 HIT domain TREPR_RS14015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREPR_RS14015 PF02403 Seryl-tRNA synthetase N-terminal domain TREPR_RS14025 PF13306 Leucine rich repeats (6 copies) TREPR_RS14030 PF02769 AIR synthase related protein, C-terminal domain TREPR_RS14030 PF13507 CobB/CobQ-like glutamine amidotransferase domain TREPR_RS14035 PF01926 50S ribosome-binding GTPase TREPR_RS14035 PF06071 Protein of unknown function (DUF933) TREPR_RS14040 PF00027 Cyclic nucleotide-binding domain TREPR_RS14045 PF00152 tRNA synthetases class II (D, K and N) TREPR_RS14050 PF02875 Mur ligase family, glutamate ligase domain TREPR_RS14050 PF08245 Mur ligase middle domain TREPR_RS14055 PF10974 TREPR_RS14055 TREPR_RS14060 PF05711 Macrocin-O-methyltransferase (TylF) TREPR_RS14065 PF01225 Mur ligase family, catalytic domain TREPR_RS14065 PF02875 Mur ligase family, glutamate ligase domain TREPR_RS14065 PF08245 Mur ligase middle domain TREPR_RS14070 PF01078 Magnesium chelatase, subunit ChlI TREPR_RS14070 PF13335 TREPR_RS14070 TREPR_RS14070 PF13541 Subunit ChlI of Mg-chelatase TREPR_RS14075 PF01184 TREPR_RS14075 TREPR_RS14080 PF00892 EamA-like transporter family TREPR_RS14085 PF01986 TREPR_RS14085 TREPR_RS14085 PF03749 Sugar fermentation stimulation protein TREPR_RS14090 PF00415 Regulator of chromosome condensation (RCC1) repeat TREPR_RS14090 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS14090 PF13540 Regulator of chromosome condensation (RCC1) repeat TREPR_RS14095 PF00849 RNA pseudouridylate synthase TREPR_RS14100 PF00072 Response regulator receiver domain TREPR_RS14100 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS14100 PF00672 HAMP domain TREPR_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS14100 PF02743 Cache domain TREPR_RS14110 PF13407 Periplasmic binding protein domain TREPR_RS14115 PF08534 Redoxin TREPR_RS14125 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS14130 PF13484 TREPR_RS14130 TREPR_RS14135 PF12654 TREPR_RS14135 TREPR_RS14140 PF07751 TREPR_RS14140 TREPR_RS14155 PF00881 Nitroreductase family TREPR_RS14160 PF12844 Helix-turn-helix domain TREPR_RS14165 PF02082 Transcriptional regulator TREPR_RS14175 PF17131 TREPR_RS14175 TREPR_RS14180 PF03176 MMPL family TREPR_RS14185 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS14190 PF00438 S-adenosylmethionine synthetase, N-terminal domain TREPR_RS14190 PF02772 S-adenosylmethionine synthetase, central domain TREPR_RS14190 PF02773 S-adenosylmethionine synthetase, C-terminal domain TREPR_RS14195 PF07715 TonB-dependent Receptor Plug Domain TREPR_RS14205 PF00472 RF-1 domain TREPR_RS14215 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS14225 PF00633 Helix-hairpin-helix motif TREPR_RS14225 PF00730 HhH-GPD superfamily base excision DNA repair protein TREPR_RS14230 PF02542 YgbB family TREPR_RS14235 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TREPR_RS14240 PF02559 CarD-like/TRCF domain TREPR_RS14250 PF01554 MatE TREPR_RS14255 PF10087 TREPR_RS14255 TREPR_RS14265 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) TREPR_RS14270 PF12646 TREPR_RS14270 TREPR_RS14275 PF00675 Insulinase (Peptidase family M16) TREPR_RS14275 PF05193 Peptidase M16 inactive domain TREPR_RS14275 PF08367 Peptidase M16C associated TREPR_RS14280 PF01706 FliG C-terminal domain TREPR_RS14280 PF14841 FliG middle domain TREPR_RS14280 PF14842 FliG N-terminal domain TREPR_RS14285 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS14290 PF00037 4Fe-4S binding domain TREPR_RS14300 PF00872 TREPR_RS14300 TREPR_RS14305 PF13751 TREPR_RS14305 TREPR_RS14315 PF13556 PucR C-terminal helix-turn-helix domain TREPR_RS14320 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS14325 PF02565 Recombination protein O C terminal TREPR_RS14325 PF11967 Recombination protein O N terminal TREPR_RS14330 PF00591 Glycosyl transferase family, a/b domain TREPR_RS14330 PF02885 Glycosyl transferase family, helical bundle domain TREPR_RS14330 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TREPR_RS14335 PF01368 DHH family TREPR_RS14335 PF02272 DHHA1 domain TREPR_RS14350 PF01165 Ribosomal protein S21 TREPR_RS14360 PF09992 Predicted periplasmic protein (DUF2233) TREPR_RS14365 PF03783 Curli production assembly/transport component CsgG TREPR_RS14370 PF00155 Aminotransferase class I and II TREPR_RS14380 PF01039 Carboxyl transferase domain TREPR_RS14385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TREPR_RS14390 PF00501 AMP-binding enzyme TREPR_RS14395 PF00990 GGDEF domain TREPR_RS14405 PF01925 TREPR_RS14405 TREPR_RS14410 PF10369 Small subunit of acetolactate synthase TREPR_RS14410 PF13710 ACT domain TREPR_RS14415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TREPR_RS14415 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain TREPR_RS14420 PF00682 HMGL-like TREPR_RS14420 PF08502 LeuA allosteric (dimerisation) domain TREPR_RS14425 PF00682 HMGL-like TREPR_RS14425 PF08502 LeuA allosteric (dimerisation) domain TREPR_RS14430 PF00180 Isocitrate/isopropylmalate dehydrogenase TREPR_RS14435 PF00920 Dehydratase family TREPR_RS14440 PF00205 Thiamine pyrophosphate enzyme, central domain TREPR_RS14440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS14440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREPR_RS14445 PF02424 ApbE family TREPR_RS14455 PF07456 TREPR_RS14455 TREPR_RS14460 PF07009 Protein of unknown function (DUF1312) TREPR_RS14465 PF02554 TREPR_RS14465 TREPR_RS14465 PF13722 TREPR_RS14465 TREPR_RS14470 PF00072 Response regulator receiver domain TREPR_RS14470 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS14470 PF08448 PAS fold TREPR_RS14475 PF01381 Helix-turn-helix TREPR_RS14480 PF00793 DAHP synthetase I family TREPR_RS14480 PF00800 Prephenate dehydratase TREPR_RS14485 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS14490 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS14495 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS14500 PF00005 ABC transporter TREPR_RS14510 PF13306 Leucine rich repeats (6 copies) TREPR_RS14520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS14525 PF07929 Plasmid pRiA4b ORF-3-like protein TREPR_RS14530 PF00384 Molybdopterin oxidoreductase TREPR_RS14530 PF01568 Molydopterin dinucleotide binding domain TREPR_RS14530 PF02613 Nitrate reductase delta subunit TREPR_RS14540 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS14545 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS14550 PF00005 ABC transporter TREPR_RS14555 PF01909 Nucleotidyltransferase domain TREPR_RS14565 PF14022 TREPR_RS14565 TREPR_RS14570 PF02384 N-6 DNA Methylase TREPR_RS14570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TREPR_RS14570 PF12950 TaqI-like C-terminal specificity domain TREPR_RS14575 PF13280 TREPR_RS14575 TREPR_RS14585 PF07022 Bacteriophage CI repressor helix-turn-helix domain TREPR_RS14590 PF14281 TREPR_RS14590 TREPR_RS14595 PF09967 TREPR_RS14595 TREPR_RS14595 PF13203 TREPR_RS14595 TREPR_RS14600 PF07728 AAA domain (dynein-related subfamily) TREPR_RS14610 PF00557 Metallopeptidase family M24 TREPR_RS14610 PF01321 Creatinase/Prolidase N-terminal domain TREPR_RS14615 PF01958 Domain of unknown function DUF108 TREPR_RS14615 PF03447 Homoserine dehydrogenase, NAD binding domain TREPR_RS14620 PF01470 Pyroglutamyl peptidase TREPR_RS14625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS14630 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS14630 PF12911 TREPR_RS14630 TREPR_RS14635 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS14640 PF00005 ABC transporter TREPR_RS14640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS14645 PF00005 ABC transporter TREPR_RS14645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS14650 PF00623 RNA polymerase Rpb1, domain 2 TREPR_RS14650 PF04983 RNA polymerase Rpb1, domain 3 TREPR_RS14650 PF04997 RNA polymerase Rpb1, domain 1 TREPR_RS14650 PF04998 RNA polymerase Rpb1, domain 5 TREPR_RS14650 PF05000 RNA polymerase Rpb1, domain 4 TREPR_RS14655 PF00562 RNA polymerase Rpb2, domain 6 TREPR_RS14655 PF04560 RNA polymerase Rpb2, domain 7 TREPR_RS14655 PF04561 RNA polymerase Rpb2, domain 2 TREPR_RS14655 PF04563 RNA polymerase beta subunit TREPR_RS14655 PF04565 RNA polymerase Rpb2, domain 3 TREPR_RS14655 PF10385 RNA polymerase beta subunit external 1 domain TREPR_RS14660 PF00542 Ribosomal protein L7/L12 C-terminal domain TREPR_RS14660 PF16320 TREPR_RS14660 TREPR_RS14665 PF00466 Ribosomal protein L10 TREPR_RS14670 PF00687 Ribosomal protein L1p/L10e family TREPR_RS14675 PF00298 Ribosomal protein L11, RNA binding domain TREPR_RS14675 PF03946 Ribosomal protein L11, N-terminal domain TREPR_RS14680 PF00467 KOW motif TREPR_RS14680 PF02357 Transcription termination factor nusG TREPR_RS14685 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TREPR_RS14695 PF00471 Ribosomal protein L33 TREPR_RS14705 PF01048 Phosphorylase superfamily TREPR_RS14710 PF00072 Response regulator receiver domain TREPR_RS14710 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS14710 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS14725 PF00589 Phage integrase family TREPR_RS14730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS14735 PF02195 ParB-like nuclease domain TREPR_RS14750 PF12728 Helix-turn-helix domain TREPR_RS14755 PF05717 TREPR_RS14755 TREPR_RS14760 PF11185 TREPR_RS14760 TREPR_RS14765 PF02811 PHP domain TREPR_RS14765 PF07733 Bacterial DNA polymerase III alpha subunit TREPR_RS14765 PF14579 Helix-hairpin-helix motif TREPR_RS14770 PF00817 impB/mucB/samB family TREPR_RS14775 PF01904 Protein of unknown function DUF72 TREPR_RS14780 PF00717 Peptidase S24-like TREPR_RS14785 PF13304 AAA domain TREPR_RS14795 PF04002 RadC-like JAB domain TREPR_RS14800 PF06067 TREPR_RS14800 TREPR_RS14825 PF12705 PD-(D/E)XK nuclease superfamily TREPR_RS14840 PF13479 TREPR_RS14840 TREPR_RS14850 PF00436 Single-strand binding protein family TREPR_RS14875 PF01381 Helix-turn-helix TREPR_RS14880 PF04970 Lecithin retinol acyltransferase TREPR_RS14895 PF13673 Acetyltransferase (GNAT) domain TREPR_RS14905 PF13306 Leucine rich repeats (6 copies) TREPR_RS14940 PF01797 Transposase IS200 like TREPR_RS14965 PF03480 Bacterial extracellular solute-binding protein, family 7 TREPR_RS14970 PF04290 TREPR_RS14970 TREPR_RS14970 PF06808 TREPR_RS14970 TREPR_RS14975 PF01553 Acyltransferase TREPR_RS14980 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS14985 PF03321 GH3 auxin-responsive promoter TREPR_RS14990 PF00072 Response regulator receiver domain TREPR_RS14990 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS14990 PF01590 GAF domain TREPR_RS14990 PF01814 Hemerythrin HHE cation binding domain TREPR_RS14990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS14995 PF00406 Adenylate kinase TREPR_RS14995 PF05191 Adenylate kinase, active site lid TREPR_RS15000 PF02535 TREPR_RS15000 TREPR_RS15005 PF04055 Radical SAM superfamily TREPR_RS15010 PF09587 Bacterial capsule synthesis protein PGA_cap TREPR_RS15015 PF00830 Ribosomal L28 family TREPR_RS15025 PF01812 5-formyltetrahydrofolate cyclo-ligase family TREPR_RS15030 PF07796 TREPR_RS15030 TREPR_RS15035 PF01243 Pyridoxamine 5'-phosphate oxidase TREPR_RS15040 PF01638 HxlR-like helix-turn-helix TREPR_RS15045 PF01643 Acyl-ACP thioesterase TREPR_RS15060 PF02310 B12 binding domain TREPR_RS15060 PF04055 Radical SAM superfamily TREPR_RS15060 PF13311 TREPR_RS15060 TREPR_RS15065 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) TREPR_RS15070 PF00128 Alpha amylase, catalytic domain TREPR_RS15070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TREPR_RS15075 PF03588 Leucyl/phenylalanyl-tRNA protein transferase TREPR_RS15080 PF01053 Cys/Met metabolism PLP-dependent enzyme TREPR_RS15090 PF00005 ABC transporter TREPR_RS15090 PF09383 NIL domain TREPR_RS15095 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15100 PF01546 Peptidase family M20/M25/M40 TREPR_RS15100 PF07687 Peptidase dimerisation domain TREPR_RS15105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS15110 PF02127 Aminopeptidase I zinc metalloprotease (M18) TREPR_RS15115 PF00005 ABC transporter TREPR_RS15115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15120 PF00005 ABC transporter TREPR_RS15120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15125 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15135 PF02384 N-6 DNA Methylase TREPR_RS15135 PF12161 HsdM N-terminal domain TREPR_RS15140 PF12668 TREPR_RS15140 TREPR_RS15145 PF13151 TREPR_RS15145 TREPR_RS15155 PF01420 Type I restriction modification DNA specificity domain TREPR_RS15160 PF00589 Phage integrase family TREPR_RS15160 PF13495 Phage integrase, N-terminal SAM-like domain TREPR_RS15165 PF01420 Type I restriction modification DNA specificity domain TREPR_RS15170 PF00271 Helicase conserved C-terminal domain TREPR_RS15170 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TREPR_RS15170 PF04851 Type III restriction enzyme, res subunit TREPR_RS15170 PF08463 TREPR_RS15170 TREPR_RS15170 PF13643 TREPR_RS15170 TREPR_RS15180 PF14384 TREPR_RS15180 TREPR_RS15190 PF07521 RNA-metabolising metallo-beta-lactamase TREPR_RS15190 PF12706 Beta-lactamase superfamily domain TREPR_RS15195 PF13855 Leucine rich repeat TREPR_RS15200 PF08279 HTH domain TREPR_RS15210 PF07728 AAA domain (dynein-related subfamily) TREPR_RS15230 PF01551 Peptidase family M23 TREPR_RS15235 PF13489 Methyltransferase domain TREPR_RS15240 PF01554 MatE TREPR_RS15245 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS15250 PF01371 Trp repressor protein TREPR_RS15255 PF01871 AMMECR1 TREPR_RS15260 PF03591 TREPR_RS15260 TREPR_RS15265 PF05437 TREPR_RS15265 TREPR_RS15270 PF02405 TREPR_RS15270 TREPR_RS15275 PF00005 ABC transporter TREPR_RS15280 PF02470 TREPR_RS15280 TREPR_RS15290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily TREPR_RS15330 PF01411 tRNA synthetases class II (A) TREPR_RS15330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TREPR_RS15335 PF13145 PPIC-type PPIASE domain TREPR_RS15335 PF13624 SurA N-terminal domain TREPR_RS15340 PF01029 NusB family TREPR_RS15355 PF00113 Enolase, C-terminal TIM barrel domain TREPR_RS15355 PF03952 Enolase, N-terminal domain TREPR_RS15360 PF05973 TREPR_RS15360 TREPR_RS15385 PF01252 TREPR_RS15385 TREPR_RS15390 PF01784 NIF3 (NGG1p interacting factor 3) TREPR_RS15400 PF08668 HDOD domain TREPR_RS15405 PF00076 RNA recognition motif TREPR_RS15425 PF12127 TREPR_RS15425 TREPR_RS15430 PF01957 NfeD-like C-terminal, partner-binding TREPR_RS15435 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS15440 PF02310 B12 binding domain TREPR_RS15440 PF02607 B12 binding domain TREPR_RS15445 PF10050 TREPR_RS15445 TREPR_RS15450 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS15460 PF00580 UvrD/REP helicase N-terminal domain TREPR_RS15460 PF13361 UvrD-like helicase C-terminal domain TREPR_RS15465 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS15470 PF04286 TREPR_RS15470 TREPR_RS15475 PF00881 Nitroreductase family TREPR_RS15485 PF02082 Transcriptional regulator TREPR_RS15490 PF01909 Nucleotidyltransferase domain TREPR_RS15495 PF09957 TREPR_RS15495 TREPR_RS15500 PF08922 Domain of unknown function (DUF1905) TREPR_RS15515 PF00665 Integrase core domain TREPR_RS15515 PF13551 Winged helix-turn helix TREPR_RS15530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREPR_RS15530 PF03129 Anticodon binding domain TREPR_RS15535 PF00708 Acylphosphatase TREPR_RS15540 PF01554 MatE TREPR_RS15550 PF13476 AAA domain TREPR_RS15550 PF13558 Putative exonuclease SbcCD, C subunit TREPR_RS15555 PF00149 Calcineurin-like phosphoesterase TREPR_RS15560 PF13407 Periplasmic binding protein domain TREPR_RS15565 PF00005 ABC transporter TREPR_RS15570 PF02653 TREPR_RS15570 TREPR_RS15575 PF00005 ABC transporter TREPR_RS15575 PF00664 ABC transporter transmembrane region TREPR_RS15580 PF12682 Flavodoxin TREPR_RS15585 PF00005 ABC transporter TREPR_RS15590 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15595 PF00497 Bacterial extracellular solute-binding proteins, family 3 TREPR_RS15600 PF01979 Amidohydrolase family TREPR_RS15605 PF00248 Aldo/keto reductase family TREPR_RS15610 PF02633 Creatinine amidohydrolase TREPR_RS15620 PF01728 FtsJ-like methyltransferase TREPR_RS15625 PF00348 Polyprenyl synthetase TREPR_RS15630 PF02151 UvrB/uvrC motif TREPR_RS15630 PF02577 Bifunctional nuclease TREPR_RS15635 PF01476 LysM domain TREPR_RS15635 PF01551 Peptidase family M23 TREPR_RS15645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TREPR_RS15645 PF07992 Pyridine nucleotide-disulphide oxidoreductase TREPR_RS15655 PF05343 M42 glutamyl aminopeptidase TREPR_RS15660 PF02633 Creatinine amidohydrolase TREPR_RS15665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS15670 PF00005 ABC transporter TREPR_RS15670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15675 PF00005 ABC transporter TREPR_RS15675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15680 PF12911 TREPR_RS15680 TREPR_RS15685 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15690 PF13566 TREPR_RS15690 TREPR_RS15695 PF13310 TREPR_RS15695 TREPR_RS15700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS15705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS15705 PF00672 HAMP domain TREPR_RS15710 PF00072 Response regulator receiver domain TREPR_RS15710 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS15710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS15710 PF08448 PAS fold TREPR_RS15715 PF08495 TREPR_RS15715 TREPR_RS15715 PF10442 TREPR_RS15715 TREPR_RS15725 PF10719 TREPR_RS15725 TREPR_RS15730 PF01966 HD domain TREPR_RS15740 PF07238 PilZ domain TREPR_RS15745 PF13581 Histidine kinase-like ATPase domain TREPR_RS15750 PF01740 STAS domain TREPR_RS15755 PF02603 HPr Serine kinase N terminus TREPR_RS15755 PF07475 HPr Serine kinase C-terminal domain TREPR_RS15760 PF00381 PTS HPr component phosphorylation site TREPR_RS15765 PF00672 HAMP domain TREPR_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS15770 PF00072 Response regulator receiver domain TREPR_RS15770 PF00158 Sigma-54 interaction domain TREPR_RS15770 PF02954 Bacterial regulatory protein, Fis family TREPR_RS15775 PF00717 Peptidase S24-like TREPR_RS15775 PF01726 LexA DNA binding domain TREPR_RS15780 PF06144 DNA polymerase III, delta subunit TREPR_RS15785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS15785 PF00999 Sodium/hydrogen exchanger family TREPR_RS15790 PF01048 Phosphorylase superfamily TREPR_RS15805 PF04055 Radical SAM superfamily TREPR_RS15810 PF00005 ABC transporter TREPR_RS15810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15815 PF00005 ABC transporter TREPR_RS15815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS15820 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15820 PF12911 TREPR_RS15820 TREPR_RS15825 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS15835 PF10672 S-adenosylmethionine-dependent methyltransferase TREPR_RS15840 PF02503 Polyphosphate kinase middle domain TREPR_RS15840 PF13089 Polyphosphate kinase N-terminal domain TREPR_RS15840 PF13090 Polyphosphate kinase C-terminal domain TREPR_RS15845 PF01966 HD domain TREPR_RS15845 PF02541 Ppx/GppA phosphatase family TREPR_RS15850 PF01204 Trehalase TREPR_RS15855 PF00710 Asparaginase TREPR_RS15855 PF02637 GatB domain TREPR_RS15855 PF02934 GatB/GatE catalytic domain TREPR_RS15865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TREPR_RS15865 PF03129 Anticodon binding domain TREPR_RS15865 PF04073 Aminoacyl-tRNA editing domain TREPR_RS15870 PF03795 YCII-related domain TREPR_RS15875 PF04909 Amidohydrolase TREPR_RS15880 PF00459 Inositol monophosphatase family TREPR_RS15885 PF00005 ABC transporter TREPR_RS15885 PF08402 TOBE domain TREPR_RS15890 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS15895 PF13343 Bacterial extracellular solute-binding protein TREPR_RS15900 PF13561 Enoyl-(Acyl carrier protein) reductase TREPR_RS15905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TREPR_RS15905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TREPR_RS15910 PF07669 Eco57I restriction-modification methylase TREPR_RS15915 PF06616 BsuBI/PstI restriction endonuclease C-terminus TREPR_RS15920 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS15920 PF13377 Periplasmic binding protein-like domain TREPR_RS15925 PF00691 OmpA family TREPR_RS15930 PF00224 Pyruvate kinase, barrel domain TREPR_RS15930 PF02887 Pyruvate kinase, alpha/beta domain TREPR_RS15935 PF00271 Helicase conserved C-terminal domain TREPR_RS15935 PF02151 UvrB/uvrC motif TREPR_RS15935 PF04851 Type III restriction enzyme, res subunit TREPR_RS15935 PF12344 Ultra-violet resistance protein B TREPR_RS15940 PF02169 LPP20 lipoprotein TREPR_RS15950 PF02169 LPP20 lipoprotein TREPR_RS15970 PF01264 Chorismate synthase TREPR_RS15975 PF01926 50S ribosome-binding GTPase TREPR_RS15975 PF13167 TREPR_RS15975 TREPR_RS15975 PF16360 TREPR_RS15975 TREPR_RS15980 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS15980 PF02861 Clp amino terminal domain TREPR_RS15980 PF07724 AAA domain (Cdc48 subfamily) TREPR_RS15980 PF10431 C-terminal, D2-small domain, of ClpB protein TREPR_RS15985 PF01758 Sodium Bile acid symporter family TREPR_RS15990 PF04055 Radical SAM superfamily TREPR_RS15990 PF13394 4Fe-4S single cluster domain TREPR_RS15995 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase TREPR_RS15995 PF03033 Glycosyltransferase family 28 N-terminal domain TREPR_RS16005 PF00155 Aminotransferase class I and II TREPR_RS16010 PF02082 Transcriptional regulator TREPR_RS16015 PF02082 Transcriptional regulator TREPR_RS16020 PF01053 Cys/Met metabolism PLP-dependent enzyme TREPR_RS16025 PF01053 Cys/Met metabolism PLP-dependent enzyme TREPR_RS16030 PF04023 FeoA domain TREPR_RS16035 PF02421 Ferrous iron transport protein B TREPR_RS16035 PF07664 TREPR_RS16035 TREPR_RS16035 PF07670 Nucleoside recognition TREPR_RS16055 PF14267 TREPR_RS16055 TREPR_RS16065 PF01661 Macro domain TREPR_RS16070 PF13280 TREPR_RS16070 TREPR_RS16085 PF13855 Leucine rich repeat TREPR_RS16090 PF00072 Response regulator receiver domain TREPR_RS16090 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS16090 PF01627 Hpt domain TREPR_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS16090 PF08448 PAS fold TREPR_RS16090 PF13426 PAS domain TREPR_RS16095 PF00448 SRP54-type protein, GTPase domain TREPR_RS16095 PF02881 SRP54-type protein, helical bundle domain TREPR_RS16095 PF02978 Signal peptide binding domain TREPR_RS16100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TREPR_RS16100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TREPR_RS16105 PF01432 Peptidase family M3 TREPR_RS16105 PF08439 Oligopeptidase F TREPR_RS16110 PF00334 Nucleoside diphosphate kinase TREPR_RS16115 PF04055 Radical SAM superfamily TREPR_RS16115 PF08497 TREPR_RS16115 TREPR_RS16115 PF11842 TREPR_RS16115 TREPR_RS16120 PF01106 NifU-like domain TREPR_RS16125 PF00365 Phosphofructokinase TREPR_RS16135 PF00588 SpoU rRNA Methylase family TREPR_RS16135 PF08032 RNA 2'-O ribose methyltransferase substrate binding TREPR_RS16140 PF01850 PIN domain TREPR_RS16145 PF04014 Antidote-toxin recognition MazE TREPR_RS16150 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS16155 PF04972 BON domain TREPR_RS16155 PF13189 Cytidylate kinase-like family TREPR_RS16160 PF00293 NUDIX domain TREPR_RS16175 PF02229 Transcriptional Coactivator p15 (PC4) TREPR_RS16180 PF00075 RNase H TREPR_RS16185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS16190 PF00118 TCP-1/cpn60 chaperonin family TREPR_RS16195 PF00392 Bacterial regulatory proteins, gntR family TREPR_RS16195 PF07729 FCD domain TREPR_RS16200 PF03480 Bacterial extracellular solute-binding protein, family 7 TREPR_RS16205 PF04290 TREPR_RS16205 TREPR_RS16210 PF06808 TREPR_RS16210 TREPR_RS16215 PF03786 D-mannonate dehydratase (UxuA) TREPR_RS16220 PF01232 Mannitol dehydrogenase Rossmann domain TREPR_RS16220 PF08125 Mannitol dehydrogenase C-terminal domain TREPR_RS16225 PF02614 Glucuronate isomerase TREPR_RS16230 PF01081 KDPG and KHG aldolase TREPR_RS16235 PF00294 pfkB family carbohydrate kinase TREPR_RS16250 PF00122 E1-E2 ATPase TREPR_RS16250 PF00403 Heavy-metal-associated domain TREPR_RS16250 PF00702 haloacid dehalogenase-like hydrolase TREPR_RS16255 PF00403 Heavy-metal-associated domain TREPR_RS16260 PF00072 Response regulator receiver domain TREPR_RS16260 PF00486 Transcriptional regulatory protein, C terminal TREPR_RS16265 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS16265 PF00672 HAMP domain TREPR_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS16270 PF04773 FecR protein TREPR_RS16295 PF02592 TREPR_RS16295 TREPR_RS16300 PF12654 TREPR_RS16300 TREPR_RS16305 PF00899 ThiF family TREPR_RS16310 PF01171 PP-loop family TREPR_RS16320 PF13416 Bacterial extracellular solute-binding protein TREPR_RS16325 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS16330 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS16335 PF00005 ABC transporter TREPR_RS16340 PF04055 Radical SAM superfamily TREPR_RS16340 PF13353 4Fe-4S single cluster domain TREPR_RS16345 PF07883 Cupin domain TREPR_RS16345 PF12833 Helix-turn-helix domain TREPR_RS16355 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS16355 PF12464 Maltose acetyltransferase TREPR_RS16360 PF01546 Peptidase family M20/M25/M40 TREPR_RS16360 PF07687 Peptidase dimerisation domain TREPR_RS16365 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS16370 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TREPR_RS16375 PF13472 GDSL-like Lipase/Acylhydrolase family TREPR_RS16380 PF01381 Helix-turn-helix TREPR_RS16385 PF00005 ABC transporter TREPR_RS16385 PF12848 ABC transporter TREPR_RS16385 PF16326 TREPR_RS16385 TREPR_RS16390 PF08239 Bacterial SH3 domain TREPR_RS16400 PF00749 tRNA synthetases class I (E and Q), catalytic domain TREPR_RS16400 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain TREPR_RS16405 PF00756 Putative esterase TREPR_RS16410 PF04015 TREPR_RS16410 TREPR_RS16410 PF12838 4Fe-4S dicluster domain TREPR_RS16415 PF02321 Outer membrane efflux protein TREPR_RS16420 PF16576 TREPR_RS16420 TREPR_RS16425 PF00873 AcrB/AcrD/AcrF family TREPR_RS16430 PF00593 TonB dependent receptor TREPR_RS16430 PF07715 TonB-dependent Receptor Plug Domain TREPR_RS16435 PF02654 TREPR_RS16435 TREPR_RS16440 PF02277 Phosphoribosyltransferase TREPR_RS16445 PF01261 Xylose isomerase-like TIM barrel TREPR_RS16450 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase TREPR_RS16455 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS16460 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family TREPR_RS16460 PF00148 Nitrogenase component 1 type Oxidoreductase TREPR_RS16465 PF00005 ABC transporter TREPR_RS16470 PF01032 FecCD transport family TREPR_RS16475 PF01497 Periplasmic binding protein TREPR_RS16480 PF00593 TonB dependent receptor TREPR_RS16480 PF07715 TonB-dependent Receptor Plug Domain TREPR_RS16490 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS16490 PF07685 CobB/CobQ-like glutamine amidotransferase domain TREPR_RS16495 PF00005 ABC transporter TREPR_RS16500 PF01032 FecCD transport family TREPR_RS16505 PF02570 Precorrin-8X methylmutase TREPR_RS16510 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TREPR_RS16515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS16515 PF07685 CobB/CobQ-like glutamine amidotransferase domain TREPR_RS16520 PF00155 Aminotransferase class I and II TREPR_RS16525 PF03186 TREPR_RS16525 TREPR_RS16530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TREPR_RS16530 PF07685 CobB/CobQ-like glutamine amidotransferase domain TREPR_RS16535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREPR_RS16535 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TREPR_RS16540 PF02571 TREPR_RS16540 TREPR_RS16545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREPR_RS16550 PF01890 Cobalamin synthesis G C-terminus TREPR_RS16550 PF11760 Cobalamin synthesis G N-terminal TREPR_RS16555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREPR_RS16560 PF01888 CbiD TREPR_RS16565 PF03544 Gram-negative bacterial TonB protein C-terminal TREPR_RS16570 PF00593 TonB dependent receptor TREPR_RS16570 PF07715 TonB-dependent Receptor Plug Domain TREPR_RS16580 PF06180 Cobalt chelatase (CbiK) TREPR_RS16585 PF01497 Periplasmic binding protein TREPR_RS16590 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS16595 PF02146 Sir2 family TREPR_RS16600 PF02677 TREPR_RS16600 TREPR_RS16605 PF04055 Radical SAM superfamily TREPR_RS16605 PF13353 4Fe-4S single cluster domain TREPR_RS16610 PF03477 ATP cone domain TREPR_RS16610 PF13597 Anaerobic ribonucleoside-triphosphate reductase TREPR_RS16615 PF10974 TREPR_RS16615 TREPR_RS16630 PF00468 Ribosomal protein L34 TREPR_RS16635 PF00825 Ribonuclease P TREPR_RS16640 PF01809 TREPR_RS16640 TREPR_RS16645 PF02096 60Kd inner membrane protein TREPR_RS16645 PF14849 YidC periplasmic domain TREPR_RS16650 PF01424 R3H domain TREPR_RS16650 PF13083 KH domain TREPR_RS16650 PF14804 Jag N-terminus TREPR_RS16655 PF05673 Protein of unknown function (DUF815) TREPR_RS16665 PF01728 FtsJ-like methyltransferase TREPR_RS16670 PF01170 Putative RNA methylase family UPF0020 TREPR_RS16670 PF02926 THUMP domain TREPR_RS16675 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS16685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS16685 PF00672 HAMP domain TREPR_RS16685 PF02743 Cache domain TREPR_RS16690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS16690 PF00672 HAMP domain TREPR_RS16695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TREPR_RS16695 PF00672 HAMP domain TREPR_RS16695 PF02743 Cache domain TREPR_RS16700 PF01594 TREPR_RS16700 TREPR_RS16705 PF01300 Telomere recombination TREPR_RS16705 PF03481 Putative GTP-binding controlling metal-binding TREPR_RS16710 PF01544 CorA-like Mg2+ transporter protein TREPR_RS16715 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TREPR_RS16730 PF00150 Cellulase (glycosyl hydrolase family 5) TREPR_RS16735 PF01464 Transglycosylase SLT domain TREPR_RS16740 PF01300 Telomere recombination TREPR_RS16745 PF03484 tRNA synthetase B5 domain TREPR_RS16750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TREPR_RS16755 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS16760 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS16760 PF12911 TREPR_RS16760 TREPR_RS16765 PF00005 ABC transporter TREPR_RS16765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TREPR_RS16770 PF00005 ABC transporter TREPR_RS16775 PF01208 Uroporphyrinogen decarboxylase (URO-D) TREPR_RS16780 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TREPR_RS16785 PF00557 Metallopeptidase family M24 TREPR_RS16785 PF01321 Creatinase/Prolidase N-terminal domain TREPR_RS16790 PF00384 Molybdopterin oxidoreductase TREPR_RS16790 PF01568 Molydopterin dinucleotide binding domain TREPR_RS16790 PF02613 Nitrate reductase delta subunit TREPR_RS16795 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase TREPR_RS16800 PF00232 Glycosyl hydrolase family 1 TREPR_RS16805 PF13350 Tyrosine phosphatase family TREPR_RS16810 PF02378 Phosphotransferase system, EIIC TREPR_RS16815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TREPR_RS16820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit TREPR_RS16825 PF00158 Sigma-54 interaction domain TREPR_RS16825 PF00874 PRD domain TREPR_RS16825 PF03610 PTS system fructose IIA component TREPR_RS16830 PF00381 PTS HPr component phosphorylation site TREPR_RS16835 PF00391 PEP-utilising enzyme, mobile domain TREPR_RS16835 PF02896 PEP-utilising enzyme, TIM barrel domain TREPR_RS16835 PF05524 PEP-utilising enzyme, N-terminal TREPR_RS16845 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS16850 PF01409 tRNA synthetases class II core domain (F) TREPR_RS16860 PF05973 TREPR_RS16860 TREPR_RS16870 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS16875 PF01694 Rhomboid family TREPR_RS16880 PF00990 GGDEF domain TREPR_RS16885 PF01207 Dihydrouridine synthase (Dus) TREPR_RS16890 PF01026 TatD related DNase TREPR_RS16895 PF00072 Response regulator receiver domain TREPR_RS16895 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS16900 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TREPR_RS16900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TREPR_RS16905 PF02132 RecR protein TREPR_RS16905 PF13662 Toprim domain TREPR_RS16910 PF02575 YbaB/EbfC DNA-binding family TREPR_RS16915 PF12169 DNA polymerase III subunits gamma and tau domain III TREPR_RS16915 PF13177 DNA polymerase III, delta subunit TREPR_RS16920 PF00135 Carboxylesterase family TREPR_RS16925 PF13458 Periplasmic binding protein TREPR_RS16930 PF02653 TREPR_RS16930 TREPR_RS16935 PF02653 TREPR_RS16935 TREPR_RS16940 PF00005 ABC transporter TREPR_RS16945 PF00005 ABC transporter TREPR_RS16945 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREPR_RS16950 PF01850 PIN domain TREPR_RS16960 PF00881 Nitroreductase family TREPR_RS16965 PF00005 ABC transporter TREPR_RS16965 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREPR_RS16970 PF00005 ABC transporter TREPR_RS16970 PF12399 Branched-chain amino acid ATP-binding cassette transporter TREPR_RS16975 PF02653 TREPR_RS16975 TREPR_RS16980 PF02653 TREPR_RS16980 TREPR_RS16985 PF13458 Periplasmic binding protein TREPR_RS16990 PF00005 ABC transporter TREPR_RS16995 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS17005 PF09084 NMT1/THI5 like TREPR_RS17010 PF01979 Amidohydrolase family TREPR_RS17015 PF01180 Dihydroorotate dehydrogenase TREPR_RS17015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TREPR_RS17015 PF14697 4Fe-4S dicluster domain TREPR_RS17020 PF01546 Peptidase family M20/M25/M40 TREPR_RS17025 PF00202 Aminotransferase class-III TREPR_RS17030 PF00465 Iron-containing alcohol dehydrogenase TREPR_RS17035 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS17035 PF14821 Threonine synthase N terminus TREPR_RS17040 PF01569 PAP2 superfamily TREPR_RS17045 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS17050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TREPR_RS17055 PF14243 TREPR_RS17055 TREPR_RS17065 PF13151 TREPR_RS17065 TREPR_RS17070 PF12668 TREPR_RS17070 TREPR_RS17085 PF00176 SNF2 family N-terminal domain TREPR_RS17085 PF00271 Helicase conserved C-terminal domain TREPR_RS17085 PF04851 Type III restriction enzyme, res subunit TREPR_RS17085 PF13091 PLD-like domain TREPR_RS17090 PF02810 SEC-C motif TREPR_RS17095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS17095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREPR_RS17100 PF02779 Transketolase, pyrimidine binding domain TREPR_RS17100 PF02780 Transketolase, C-terminal domain TREPR_RS17105 PF00456 Transketolase, thiamine diphosphate binding domain TREPR_RS17110 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS17110 PF13377 Periplasmic binding protein-like domain TREPR_RS17115 PF13407 Periplasmic binding protein domain TREPR_RS17120 PF02653 TREPR_RS17120 TREPR_RS17125 PF00005 ABC transporter TREPR_RS17130 PF00356 Bacterial regulatory proteins, lacI family TREPR_RS17130 PF13377 Periplasmic binding protein-like domain TREPR_RS17135 PF01261 Xylose isomerase-like TIM barrel TREPR_RS17140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TREPR_RS17140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TREPR_RS17145 PF04962 KduI/IolB family TREPR_RS17150 PF00205 Thiamine pyrophosphate enzyme, central domain TREPR_RS17150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TREPR_RS17150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TREPR_RS17160 PF01261 Xylose isomerase-like TIM barrel TREPR_RS17165 PF00162 Phosphoglycerate kinase TREPR_RS17170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TREPR_RS17175 PF00390 Malic enzyme, N-terminal domain TREPR_RS17175 PF03949 Malic enzyme, NAD binding domain TREPR_RS17185 PF09861 Domain of unknown function (DUF2088) TREPR_RS17190 PF00037 4Fe-4S binding domain TREPR_RS17190 PF02906 Iron only hydrogenase large subunit, C-terminal domain TREPR_RS17195 PF00290 Tryptophan synthase alpha chain TREPR_RS17200 PF00291 Pyridoxal-phosphate dependent enzyme TREPR_RS17205 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TREPR_RS17210 PF00218 Indole-3-glycerol phosphate synthase TREPR_RS17215 PF00591 Glycosyl transferase family, a/b domain TREPR_RS17215 PF02885 Glycosyl transferase family, helical bundle domain TREPR_RS17220 PF00117 Glutamine amidotransferase class-I TREPR_RS17225 PF00425 chorismate binding enzyme TREPR_RS17225 PF04715 Anthranilate synthase component I, N terminal region TREPR_RS17230 PF10080 TREPR_RS17230 TREPR_RS17235 PF00403 Heavy-metal-associated domain TREPR_RS17235 PF13386 TREPR_RS17235 TREPR_RS17240 PF01963 TREPR_RS17240 TREPR_RS17245 PF01368 DHH family TREPR_RS17245 PF02272 DHHA1 domain TREPR_RS17250 PF13432 Tetratricopeptide repeat TREPR_RS17250 PF14559 Tetratricopeptide repeat TREPR_RS17260 PF03054 tRNA methyl transferase TREPR_RS17270 PF04204 Homoserine O-succinyltransferase TREPR_RS17275 PF03352 Methyladenine glycosylase TREPR_RS17280 PF00675 Insulinase (Peptidase family M16) TREPR_RS17280 PF05193 Peptidase M16 inactive domain TREPR_RS17285 PF00881 Nitroreductase family TREPR_RS17290 PF12697 Alpha/beta hydrolase family TREPR_RS17295 PF02875 Mur ligase family, glutamate ligase domain TREPR_RS17295 PF08245 Mur ligase middle domain TREPR_RS17300 PF01820 D-ala D-ala ligase N-terminus TREPR_RS17300 PF07478 D-ala D-ala ligase C-terminus TREPR_RS17305 PF10531 SLBB domain TREPR_RS17335 PF03062 TREPR_RS17335 TREPR_RS17340 PF10531 SLBB domain TREPR_RS17345 PF02706 Chain length determinant protein TREPR_RS17350 PF02719 Polysaccharide biosynthesis protein TREPR_RS17355 PF02397 TREPR_RS17355 TREPR_RS17360 PF04321 RmlD substrate binding domain TREPR_RS17375 PF04015 TREPR_RS17375 TREPR_RS17385 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TREPR_RS17385 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TREPR_RS17385 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TREPR_RS17390 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS17395 PF13692 Glycosyl transferases group 1 TREPR_RS17400 PF00534 Glycosyl transferases group 1 TREPR_RS17410 PF00733 Asparagine synthase TREPR_RS17410 PF13537 Glutamine amidotransferase domain TREPR_RS17420 PF01943 TREPR_RS17420 TREPR_RS17425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TREPR_RS17430 PF13419 Haloacid dehalogenase-like hydrolase TREPR_RS17435 PF02779 Transketolase, pyrimidine binding domain TREPR_RS17435 PF02780 Transketolase, C-terminal domain TREPR_RS17440 PF00456 Transketolase, thiamine diphosphate binding domain TREPR_RS17445 PF01370 NAD dependent epimerase/dehydratase family TREPR_RS17450 PF01757 TREPR_RS17450 TREPR_RS17465 PF05523 WxcM-like, C-terminal TREPR_RS17470 PF01850 PIN domain TREPR_RS17475 PF04014 Antidote-toxin recognition MazE TREPR_RS17485 PF08843 Nucleotidyl transferase of unknown function (DUF1814) TREPR_RS17490 PF01850 PIN domain TREPR_RS17500 PF13173 AAA domain TREPR_RS17500 PF13635 TREPR_RS17500 TREPR_RS17510 PF01909 Nucleotidyltransferase domain TREPR_RS17515 PF04892 TREPR_RS17515 TREPR_RS17520 PF02673 TREPR_RS17520 TREPR_RS17525 PF01025 GrpE TREPR_RS17530 PF00012 Hsp70 protein TREPR_RS17535 PF00226 DnaJ domain TREPR_RS17535 PF00684 DnaJ central domain TREPR_RS17535 PF01556 DnaJ C terminal domain TREPR_RS17540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TREPR_RS17540 PF13375 RnfC Barrel sandwich hybrid domain TREPR_RS17545 PF03116 TREPR_RS17545 TREPR_RS17550 PF04205 FMN-binding domain TREPR_RS17555 PF02508 TREPR_RS17555 TREPR_RS17560 PF02508 TREPR_RS17560 TREPR_RS17565 PF00037 4Fe-4S binding domain TREPR_RS17565 PF04060 Putative Fe-S cluster TREPR_RS17565 PF12838 4Fe-4S dicluster domain TREPR_RS17575 PF00753 Metallo-beta-lactamase superfamily TREPR_RS17575 PF07521 RNA-metabolising metallo-beta-lactamase TREPR_RS17575 PF10996 Beta-Casp domain TREPR_RS17580 PF00248 Aldo/keto reductase family TREPR_RS17580 PF13534 4Fe-4S dicluster domain TREPR_RS17585 PF00588 SpoU rRNA Methylase family TREPR_RS17585 PF08032 RNA 2'-O ribose methyltransferase substrate binding TREPR_RS17590 PF08239 Bacterial SH3 domain TREPR_RS17595 PF01435 Peptidase family M48 TREPR_RS17600 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS17600 PF05226 TREPR_RS17600 TREPR_RS17605 PF00669 Bacterial flagellin N-terminal helical region TREPR_RS17605 PF00700 Bacterial flagellin C-terminal helical region TREPR_RS17610 PF10023 TREPR_RS17610 TREPR_RS17620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TREPR_RS17625 PF04316 Anti-sigma-28 factor, FlgM TREPR_RS17630 PF00588 SpoU rRNA Methylase family TREPR_RS17635 PF05635 23S rRNA-intervening sequence protein TREPR_RS17640 PF03328 HpcH/HpaI aldolase/citrate lyase family TREPR_RS17645 PF04073 Aminoacyl-tRNA editing domain TREPR_RS17655 PF03724 META domain TREPR_RS17660 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS17665 PF00005 ABC transporter TREPR_RS17670 PF13343 Bacterial extracellular solute-binding protein TREPR_RS17675 PF00521 DNA gyrase/topoisomerase IV, subunit A TREPR_RS17675 PF03989 DNA gyrase C-terminal domain, beta-propeller TREPR_RS17680 PF00990 GGDEF domain TREPR_RS17680 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term TREPR_RS17685 PF00072 Response regulator receiver domain TREPR_RS17685 PF00512 His Kinase A (phospho-acceptor) domain TREPR_RS17685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS17685 PF08448 PAS fold TREPR_RS17690 PF00204 DNA gyrase B TREPR_RS17690 PF00986 DNA gyrase B subunit, carboxyl terminus TREPR_RS17690 PF01751 Toprim domain TREPR_RS17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TREPR_RS17710 PF04748 Divergent polysaccharide deacetylase TREPR_RS17715 PF00004 ATPase family associated with various cellular activities (AAA) TREPR_RS17720 PF00535 Glycosyl transferase family 2 TREPR_RS17725 PF13751 TREPR_RS17725 TREPR_RS17730 PF05598 TREPR_RS17730 TREPR_RS17735 PF00515 Tetratricopeptide repeat TREPR_RS17735 PF13181 Tetratricopeptide repeat TREPR_RS17740 PF13306 Leucine rich repeats (6 copies) TREPR_RS17745 PF01381 Helix-turn-helix TREPR_RS17750 PF17128 TREPR_RS17750 TREPR_RS17755 PF01757 TREPR_RS17755 TREPR_RS17760 PF01381 Helix-turn-helix TREPR_RS17765 PF00005 ABC transporter TREPR_RS17765 PF00528 Binding-protein-dependent transport system inner membrane component TREPR_RS17775 PF05168 HEPN domain TREPR_RS17780 PF05147 Lanthionine synthetase C-like protein TREPR_RS17785 PF05147 Lanthionine synthetase C-like protein TREPR_RS17790 PF00797 N-acetyltransferase TREPR_RS17795 PF14337 TREPR_RS17795 TREPR_RS17800 PF00753 Metallo-beta-lactamase superfamily TREPR_RS17800 PF00756 Putative esterase TREPR_RS17805 PF00248 Aldo/keto reductase family TREPR_RS17810 PF01420 Type I restriction modification DNA specificity domain TREPR_RS17815 PF08218 Citrate lyase ligase C-terminal domain TREPR_RS17820 PF08218 Citrate lyase ligase C-terminal domain TREPR_RS17825 PF08218 Citrate lyase ligase C-terminal domain TREPR_RS17830 PF08218 Citrate lyase ligase C-terminal domain TREPR_RS17835 PF01790 TREPR_RS17835 TREPR_RS17840 PF01627 Hpt domain TREPR_RS17845 PF00535 Glycosyl transferase family 2 TREPR_RS17850 PF00132 Bacterial transferase hexapeptide (six repeats) TREPR_RS17855 PF01531 TREPR_RS17855 TREPR_RS17860 PF00005 ABC transporter TREPR_RS17865 PF07581 TREPR_RS17865 TREPR_RS17870 PF00691 OmpA family TREPR_RS17875 PF00196 Bacterial regulatory proteins, luxR family TREPR_RS17880 PF03372 Endonuclease/Exonuclease/phosphatase family TREPR_RS17885 PF03358 NADPH-dependent FMN reductase TREPR_RS17890 PF13306 Leucine rich repeats (6 copies) TREPR_RS17895 PF03781 Sulfatase-modifying factor enzyme 1 TREPR_RS17905 PF12844 Helix-turn-helix domain TREPR_RS17910 PF00440 Bacterial regulatory proteins, tetR family TREPR_RS17915 PF00072 Response regulator receiver domain TREPR_RS17915 PF00211 Adenylate and Guanylate cyclase catalytic domain TREPR_RS17920 PF00135 Carboxylesterase family TREPR_RS17920 PF00753 Metallo-beta-lactamase superfamily TREPR_RS17920 PF12733 TREPR_RS17920 TREPR_RS17925 PF03668 TREPR_RS17925 TREPR_RS17930 PF02311 AraC-like ligand binding domain TREPR_RS17930 PF12833 Helix-turn-helix domain TREPR_RS17940 PF00263 TREPR_RS17940 TREPR_RS17940 PF03958 Bacterial type II/III secretion system short domain TREPR_RS17945 PF02368 Bacterial Ig-like domain (group 2) TREPR_RS17950 PF01381 Helix-turn-helix TREPR_RS17960 PF00176 SNF2 family N-terminal domain TREPR_RS17960 PF00271 Helicase conserved C-terminal domain TREPR_RS17960 PF04434 TREPR_RS17960 TREPR_RS17960 PF12419 TREPR_RS17960 TREPR_RS17965 PF01551 Peptidase family M23 TREPR_RS17975 PF00929 Exonuclease TREPR_RS17980 PF07581 TREPR_RS17980 TREPR_RS17985 PF07581 TREPR_RS17985 TREPR_RS17995 PF13306 Leucine rich repeats (6 copies) TREPR_RS18005 PF00293 NUDIX domain TREPR_RS18010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TREPR_RS18015 PF13472 GDSL-like Lipase/Acylhydrolase family TREPR_RS18020 PF07669 Eco57I restriction-modification methylase