JO40_RS00020	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
JO40_RS00020	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
JO40_RS00025	PF12769	Domain of unknown function (DUF3814)
JO40_RS00030	PF02233	NAD(P) transhydrogenase beta subunit
JO40_RS00035	PF00133	tRNA synthetases class I (I, L, M and V)
JO40_RS00035	PF08264	Anticodon-binding domain of tRNA
JO40_RS00035	PF09334	tRNA synthetases class I (M)
JO40_RS00035	PF13603	Leucyl-tRNA synthetase, Domain 2
JO40_RS00040	PF04205	FMN-binding domain
JO40_RS00045	PF02163	Peptidase family M50
JO40_RS00045	PF13180	PDZ domain
JO40_RS00050	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
JO40_RS00050	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
JO40_RS00050	PF13288	DXP reductoisomerase C-terminal domain
JO40_RS00055	PF01148	Cytidylyltransferase family
JO40_RS00060	PF01255	Putative undecaprenyl diphosphate synthase
JO40_RS00065	PF01765	Ribosome recycling factor
JO40_RS00070	PF00889	Elongation factor TS
JO40_RS00075	PF00318	Ribosomal protein S2
JO40_RS00080	PF02545	Maf-like protein
JO40_RS00085	PF13646	HEAT repeats
JO40_RS00100	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
JO40_RS00105	PF00669	Bacterial flagellin N-terminal helical region
JO40_RS00105	PF00700	Bacterial flagellin C-terminal helical region
JO40_RS00105	PF07196	Flagellin hook IN motif
JO40_RS00110	PF02623	FliW protein
JO40_RS00115	PF02599	Global regulator protein family
JO40_RS00120	PF04018	JO40_RS00120
JO40_RS00125	PF01476	LysM domain
JO40_RS00125	PF01551	Peptidase family M23
JO40_RS00135	PF04542	Sigma-70 region 2
JO40_RS00135	PF08281	Sigma-70, region 4
JO40_RS00145	PF03748	JO40_RS00145
JO40_RS00150	PF00924	Mechanosensitive ion channel
JO40_RS00155	PF04200	Lipoprotein associated domain
JO40_RS00165	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS00170	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS00170	PF00672	HAMP domain
JO40_RS00170	PF02743	Cache domain
JO40_RS00175	PF01547	Bacterial extracellular solute-binding protein
JO40_RS00190	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS00195	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00200	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00205	PF00005	ABC transporter
JO40_RS00205	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS00210	PF00005	ABC transporter
JO40_RS00215	PF00266	Aminotransferase class-V
JO40_RS00220	PF02769	AIR synthase related protein, C-terminal domain
JO40_RS00225	PF04205	FMN-binding domain
JO40_RS00230	PF11823	JO40_RS00230
JO40_RS00235	PF01206	Sulfurtransferase TusA
JO40_RS00240	PF04143	JO40_RS00240
JO40_RS00245	PF00349	Hexokinase
JO40_RS00245	PF03727	Hexokinase
JO40_RS00250	PF00438	S-adenosylmethionine synthetase, N-terminal domain
JO40_RS00250	PF02772	S-adenosylmethionine synthetase, central domain
JO40_RS00250	PF02773	S-adenosylmethionine synthetase, C-terminal domain
JO40_RS00255	PF00892	EamA-like transporter family
JO40_RS00260	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS00265	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00270	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00270	PF12911	JO40_RS00270
JO40_RS00275	PF00005	ABC transporter
JO40_RS00275	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS00280	PF00005	ABC transporter
JO40_RS00280	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS00295	PF02525	Flavodoxin-like fold
JO40_RS00300	PF01588	Putative tRNA binding domain
JO40_RS00300	PF09334	tRNA synthetases class I (M)
JO40_RS00310	PF00005	ABC transporter
JO40_RS00320	PF01554	MatE
JO40_RS00325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS00325	PF00672	HAMP domain
JO40_RS00330	PF03553	JO40_RS00330
JO40_RS00340	PF00158	Sigma-54 interaction domain
JO40_RS00340	PF00989	PAS fold
JO40_RS00350	PF00301	Rubredoxin
JO40_RS00360	PF13481	AAA domain
JO40_RS00365	PF00009	Elongation factor Tu GTP binding domain
JO40_RS00365	PF00679	Elongation factor G C-terminus
JO40_RS00365	PF03144	Elongation factor Tu domain 2
JO40_RS00365	PF03764	Elongation factor G, domain IV
JO40_RS00365	PF14492	Elongation Factor G, domain II
JO40_RS00370	PF00177	Ribosomal protein S7p/S5e
JO40_RS00375	PF00164	Ribosomal protein S12/S23
JO40_RS00380	PF11756	JO40_RS00380
JO40_RS00385	PF04304	JO40_RS00385
JO40_RS00390	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
JO40_RS00390	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
JO40_RS00390	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
JO40_RS00390	PF10371	Domain of unknown function
JO40_RS00390	PF13484	JO40_RS00390
JO40_RS00390	PF17147	JO40_RS00390
JO40_RS00395	PF01177	Asp/Glu/Hydantoin racemase
JO40_RS00400	PF01053	Cys/Met metabolism PLP-dependent enzyme
JO40_RS00405	PF00892	EamA-like transporter family
JO40_RS00410	PF03553	JO40_RS00410
JO40_RS00415	PF13637	Ankyrin repeats (many copies)
JO40_RS00430	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS00435	PF12784	JO40_RS00435
JO40_RS00445	PF00005	ABC transporter
JO40_RS00450	PF01891	Cobalt uptake substrate-specific transmembrane region
JO40_RS00460	PF01891	Cobalt uptake substrate-specific transmembrane region
JO40_RS00470	PF07690	Major Facilitator Superfamily
JO40_RS00475	PF01850	PIN domain
JO40_RS00490	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
JO40_RS00490	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS00495	PF01989	Protein of unknown function DUF126
JO40_RS00500	PF04412	JO40_RS00500
JO40_RS00505	PF01784	NIF3 (NGG1p interacting factor 3)
JO40_RS00510	PF02655	ATP-grasp domain
JO40_RS00515	PF00288	GHMP kinases N terminal domain
JO40_RS00515	PF08544	GHMP kinases C terminal
JO40_RS00515	PF10509	Galactokinase galactose-binding signature
JO40_RS00525	PF00266	Aminotransferase class-V
JO40_RS00530	PF01592	NifU-like N terminal domain
JO40_RS00545	PF10670	JO40_RS00545
JO40_RS00555	PF01544	CorA-like Mg2+ transporter protein
JO40_RS00560	PF01743	Poly A polymerase head domain
JO40_RS00560	PF12627	Probable RNA and SrmB- binding site of polymerase A
JO40_RS00560	PF13735	tRNA nucleotidyltransferase domain 2 putative
JO40_RS00565	PF12784	JO40_RS00565
JO40_RS00575	PF00011	Hsp20/alpha crystallin family
JO40_RS00585	PF00550	Phosphopantetheine attachment site
JO40_RS00590	PF01783	Ribosomal L32p protein family
JO40_RS00600	PF02310	B12 binding domain
JO40_RS00610	PF16811	JO40_RS00610
JO40_RS00615	PF03480	Bacterial extracellular solute-binding protein, family 7
JO40_RS00620	PF06808	JO40_RS00620
JO40_RS00630	PF02601	JO40_RS00630
JO40_RS00630	PF13742	JO40_RS00630
JO40_RS00635	PF05362	Lon protease (S16) C-terminal proteolytic domain
JO40_RS00635	PF13654	AAA domain
JO40_RS00645	PF01814	Hemerythrin HHE cation binding domain
JO40_RS00650	PF00575	S1 RNA binding domain
JO40_RS00650	PF09371	Tex-like protein N-terminal domain
JO40_RS00650	PF12836	Helix-hairpin-helix motif
JO40_RS00650	PF16921	JO40_RS00650
JO40_RS00665	PF02609	Exonuclease VII small subunit
JO40_RS00670	PF01119	DNA mismatch repair protein, C-terminal domain
JO40_RS00670	PF08676	MutL C terminal dimerisation domain
JO40_RS00670	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS00675	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS00675	PF00672	HAMP domain
JO40_RS00675	PF02743	Cache domain
JO40_RS00680	PF00072	Response regulator receiver domain
JO40_RS00680	PF00512	His Kinase A (phospho-acceptor) domain
JO40_RS00680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS00685	PF00072	Response regulator receiver domain
JO40_RS00690	PF01965	DJ-1/PfpI family
JO40_RS00695	PF13649	Methyltransferase domain
JO40_RS00710	PF00899	ThiF family
JO40_RS00715	PF00953	Glycosyl transferase family 4
JO40_RS00720	PF00623	RNA polymerase Rpb1, domain 2
JO40_RS00720	PF04983	RNA polymerase Rpb1, domain 3
JO40_RS00720	PF04997	RNA polymerase Rpb1, domain 1
JO40_RS00720	PF04998	RNA polymerase Rpb1, domain 5
JO40_RS00720	PF05000	RNA polymerase Rpb1, domain 4
JO40_RS00725	PF00562	RNA polymerase Rpb2, domain 6
JO40_RS00725	PF04560	RNA polymerase Rpb2, domain 7
JO40_RS00725	PF04561	RNA polymerase Rpb2, domain 2
JO40_RS00725	PF04563	RNA polymerase beta subunit
JO40_RS00725	PF04565	RNA polymerase Rpb2, domain 3
JO40_RS00725	PF10385	RNA polymerase beta subunit external 1 domain
JO40_RS00730	PF00542	Ribosomal protein L7/L12 C-terminal domain
JO40_RS00730	PF16320	JO40_RS00730
JO40_RS00735	PF00466	Ribosomal protein L10
JO40_RS00740	PF00687	Ribosomal protein L1p/L10e family
JO40_RS00745	PF00298	Ribosomal protein L11, RNA binding domain
JO40_RS00745	PF03946	Ribosomal protein L11, N-terminal domain
JO40_RS00750	PF00467	KOW motif
JO40_RS00750	PF02357	Transcription termination factor nusG
JO40_RS00755	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
JO40_RS00765	PF00471	Ribosomal protein L33
JO40_RS00775	PF02321	Outer membrane efflux protein
JO40_RS00780	PF13437	HlyD family secretion protein
JO40_RS00780	PF13533	Biotin-lipoyl like
JO40_RS00785	PF00005	ABC transporter
JO40_RS00785	PF00664	ABC transporter transmembrane region
JO40_RS00785	PF03412	Peptidase C39 family
JO40_RS00800	PF01522	Polysaccharide deacetylase
JO40_RS00815	PF00183	Hsp90 protein
JO40_RS00815	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS00820	PF01627	Hpt domain
JO40_RS00825	PF00580	UvrD/REP helicase N-terminal domain
JO40_RS00825	PF13361	UvrD-like helicase C-terminal domain
JO40_RS00830	PF00005	ABC transporter
JO40_RS00830	PF00664	ABC transporter transmembrane region
JO40_RS00835	PF00005	ABC transporter
JO40_RS00835	PF00664	ABC transporter transmembrane region
JO40_RS00840	PF01546	Peptidase family M20/M25/M40
JO40_RS00840	PF07687	Peptidase dimerisation domain
JO40_RS00845	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00850	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS00860	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
JO40_RS00860	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
JO40_RS00865	PF07690	Major Facilitator Superfamily
JO40_RS00870	PF00633	Helix-hairpin-helix motif
JO40_RS00870	PF00730	HhH-GPD superfamily base excision DNA repair protein
JO40_RS00870	PF10576	Iron-sulfur binding domain of endonuclease III
JO40_RS00875	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS00880	PF00753	Metallo-beta-lactamase superfamily
JO40_RS00885	PF01370	NAD dependent epimerase/dehydratase family
JO40_RS00890	PF08011	JO40_RS00890
JO40_RS00890	PF09820	JO40_RS00890
JO40_RS00895	PF03819	MazG nucleotide pyrophosphohydrolase domain
JO40_RS00900	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
JO40_RS00900	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
JO40_RS00910	PF00485	Phosphoribulokinase / Uridine kinase family
JO40_RS00920	PF00814	Glycoprotease family
JO40_RS00930	PF04055	Radical SAM superfamily
JO40_RS00930	PF13353	4Fe-4S single cluster domain
JO40_RS00935	PF12833	Helix-turn-helix domain
JO40_RS00945	PF00005	ABC transporter
JO40_RS00945	PF00664	ABC transporter transmembrane region
JO40_RS00950	PF00171	Aldehyde dehydrogenase family
JO40_RS00955	PF02527	rRNA small subunit methyltransferase G
JO40_RS00960	PF12850	Calcineurin-like phosphoesterase superfamily domain
JO40_RS00965	PF10947	JO40_RS00965
JO40_RS00985	PF06769	Plasmid encoded toxin Txe
JO40_RS00990	PF04221	RelB antitoxin
JO40_RS00995	PF13481	AAA domain
JO40_RS00995	PF13541	Subunit ChlI of Mg-chelatase
JO40_RS01000	PF10609	ParA/MinD ATPase like
JO40_RS01005	PF08011	JO40_RS01005
JO40_RS01005	PF09820	JO40_RS01005
JO40_RS01015	PF00005	ABC transporter
JO40_RS01020	PF01032	FecCD transport family
JO40_RS01025	PF01497	Periplasmic binding protein
JO40_RS01030	PF05034	Methylaspartate ammonia-lyase N-terminus
JO40_RS01030	PF07476	Methylaspartate ammonia-lyase C-terminus
JO40_RS01035	PF06368	Methylaspartate mutase E chain (MutE)
JO40_RS01050	PF00270	DEAD/DEAH box helicase
JO40_RS01050	PF00271	Helicase conserved C-terminal domain
JO40_RS01050	PF03880	DbpA RNA binding domain
JO40_RS01055	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
JO40_RS01060	PF14238	JO40_RS01060
JO40_RS01075	PF00005	ABC transporter
JO40_RS01080	PF00672	HAMP domain
JO40_RS01080	PF07228	Stage II sporulation protein E (SpoIIE)
JO40_RS01090	PF03687	JO40_RS01090
JO40_RS01095	PF00521	DNA gyrase/topoisomerase IV, subunit A
JO40_RS01105	PF07355	JO40_RS01105
JO40_RS01110	PF09338	JO40_RS01110
JO40_RS01115	PF02677	JO40_RS01115
JO40_RS01120	PF01368	DHH family
JO40_RS01125	PF02617	ATP-dependent Clp protease adaptor protein ClpS
JO40_RS01130	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS01130	PF02861	Clp amino terminal domain
JO40_RS01130	PF07724	AAA domain (Cdc48 subfamily)
JO40_RS01130	PF10431	C-terminal, D2-small domain, of ClpB protein
JO40_RS01135	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
JO40_RS01140	PF03006	JO40_RS01140
JO40_RS01145	PF02661	Fic/DOC family
JO40_RS01150	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS01150	PF02190	ATP-dependent protease La (LON) domain
JO40_RS01150	PF05362	Lon protease (S16) C-terminal proteolytic domain
JO40_RS01165	PF08020	Protein of unknown function (DUF1706)
JO40_RS01170	PF08279	HTH domain
JO40_RS01170	PF13280	JO40_RS01170
JO40_RS01180	PF01850	PIN domain
JO40_RS01190	PF00561	alpha/beta hydrolase fold
JO40_RS01195	PF01909	Nucleotidyltransferase domain
JO40_RS01200	PF00691	OmpA family
JO40_RS01205	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
JO40_RS01205	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
JO40_RS01205	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
JO40_RS01205	PF10371	Domain of unknown function
JO40_RS01205	PF12838	4Fe-4S dicluster domain
JO40_RS01205	PF17147	JO40_RS01205
JO40_RS01210	PF00149	Calcineurin-like phosphoesterase
JO40_RS01210	PF02872	5'-nucleotidase, C-terminal domain
JO40_RS01215	PF07907	JO40_RS01215
JO40_RS01220	PF13529	Peptidase_C39 like family
JO40_RS01225	PF00860	Permease family
JO40_RS01235	PF09860	JO40_RS01235
JO40_RS01240	PF13419	Haloacid dehalogenase-like hydrolase
JO40_RS01250	PF00113	Enolase, C-terminal TIM barrel domain
JO40_RS01250	PF03952	Enolase, N-terminal domain
JO40_RS01255	PF13302	Acetyltransferase (GNAT) domain
JO40_RS01260	PF01189	NOL1/NOP2/sun family
JO40_RS01265	PF04298	JO40_RS01265
JO40_RS01275	PF12650	JO40_RS01275
JO40_RS01280	PF08241	Methyltransferase domain
JO40_RS01285	PF12958	JO40_RS01285
JO40_RS01290	PF03358	NADPH-dependent FMN reductase
JO40_RS01305	PF00654	Voltage gated chloride channel
JO40_RS01305	PF02080	TrkA-C domain
JO40_RS01310	PF08011	JO40_RS01310
JO40_RS01310	PF09820	JO40_RS01310
JO40_RS01315	PF01926	50S ribosome-binding GTPase
JO40_RS01315	PF10396	GTP-binding protein TrmE N-terminus
JO40_RS01315	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
JO40_RS01320	PF01569	PAP2 superfamily
JO40_RS01330	PF14353	JO40_RS01330
JO40_RS01345	PF00501	AMP-binding enzyme
JO40_RS01345	PF13193	AMP-binding enzyme C-terminal domain
JO40_RS01350	PF02195	ParB-like nuclease domain
JO40_RS01360	PF01551	Peptidase family M23
JO40_RS01365	PF01368	DHH family
JO40_RS01365	PF02272	DHHA1 domain
JO40_RS01370	PF00591	Glycosyl transferase family, a/b domain
JO40_RS01370	PF02885	Glycosyl transferase family, helical bundle domain
JO40_RS01370	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
JO40_RS01380	PF00472	RF-1 domain
JO40_RS01380	PF03462	PCRF domain
JO40_RS01385	PF00696	Amino acid kinase family
JO40_RS01390	PF01554	MatE
JO40_RS01395	PF13302	Acetyltransferase (GNAT) domain
JO40_RS01400	PF01165	Ribosomal protein S21
JO40_RS01405	PF00583	Acetyltransferase (GNAT) family
JO40_RS01410	PF02127	Aminopeptidase I zinc metalloprotease (M18)
JO40_RS01415	PF01134	Glucose inhibited division protein A
JO40_RS01415	PF13932	GidA associated domain 3
JO40_RS01420	PF00580	UvrD/REP helicase N-terminal domain
JO40_RS01420	PF13361	UvrD-like helicase C-terminal domain
JO40_RS01440	PF00158	Sigma-54 interaction domain
JO40_RS01440	PF13185	GAF domain
JO40_RS01455	PF13346	JO40_RS01455
JO40_RS01470	PF12784	JO40_RS01470
JO40_RS01485	PF01145	SPFH domain / Band 7 family
JO40_RS01490	PF03167	Uracil DNA glycosylase superfamily
JO40_RS01495	PF00270	DEAD/DEAH box helicase
JO40_RS01495	PF00271	Helicase conserved C-terminal domain
JO40_RS01500	PF06574	FAD synthetase
JO40_RS01505	PF00312	Ribosomal protein S15
JO40_RS01510	PF00013	KH domain
JO40_RS01510	PF00575	S1 RNA binding domain
JO40_RS01510	PF01138	3' exoribonuclease family, domain 1
JO40_RS01510	PF03725	3' exoribonuclease family, domain 2
JO40_RS01510	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
JO40_RS01515	PF00692	dUTPase
JO40_RS01520	PF03739	JO40_RS01520
JO40_RS01525	PF03739	JO40_RS01525
JO40_RS01530	PF00849	RNA pseudouridylate synthase
JO40_RS01535	PF00155	Aminotransferase class I and II
JO40_RS01540	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
JO40_RS01575	PF00005	ABC transporter
JO40_RS01580	PF00291	Pyridoxal-phosphate dependent enzyme
JO40_RS01580	PF14821	Threonine synthase N terminus
JO40_RS01585	PF02559	CarD-like/TRCF domain
JO40_RS01590	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
JO40_RS01595	PF02542	YgbB family
JO40_RS01605	PF13419	Haloacid dehalogenase-like hydrolase
JO40_RS01615	PF13176	Tetratricopeptide repeat
JO40_RS01615	PF13432	Tetratricopeptide repeat
JO40_RS01620	PF08544	GHMP kinases C terminal
JO40_RS01620	PF10509	Galactokinase galactose-binding signature
JO40_RS01625	PF00795	Carbon-nitrogen hydrolase
JO40_RS01630	PF13180	PDZ domain
JO40_RS01630	PF13365	Trypsin-like peptidase domain
JO40_RS01635	PF01312	FlhB HrpN YscU SpaS Family
JO40_RS01640	PF11871	JO40_RS01640
JO40_RS01640	PF13487	HD domain
JO40_RS01660	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
JO40_RS01660	PF02403	Seryl-tRNA synthetase N-terminal domain
JO40_RS01665	PF13208	JO40_RS01665
JO40_RS01665	PF15615	JO40_RS01665
JO40_RS01670	PF10923	JO40_RS01670
JO40_RS01675	PF00270	DEAD/DEAH box helicase
JO40_RS01675	PF00271	Helicase conserved C-terminal domain
JO40_RS01690	PF00117	Glutamine amidotransferase class-I
JO40_RS01690	PF06418	CTP synthase N-terminus
JO40_RS01695	PF12796	Ankyrin repeats (3 copies)
JO40_RS01695	PF13637	Ankyrin repeats (many copies)
JO40_RS01705	PF01272	Transcription elongation factor, GreA/GreB, C-term
JO40_RS01705	PF03449	Transcription elongation factor, N-terminal
JO40_RS01710	PF14559	Tetratricopeptide repeat
JO40_RS01720	PF01168	Alanine racemase, N-terminal domain
JO40_RS01725	PF13349	JO40_RS01725
JO40_RS01740	PF01061	JO40_RS01740
JO40_RS01745	PF00005	ABC transporter
JO40_RS01755	PF03013	Pyrimidine dimer DNA glycosylase
JO40_RS01760	PF01145	SPFH domain / Band 7 family
JO40_RS01765	PF01145	SPFH domain / Band 7 family
JO40_RS01765	PF16200	JO40_RS01765
JO40_RS01770	PF08239	Bacterial SH3 domain
JO40_RS01780	PF00005	ABC transporter
JO40_RS01780	PF00664	ABC transporter transmembrane region
JO40_RS01785	PF00005	ABC transporter
JO40_RS01785	PF00664	ABC transporter transmembrane region
JO40_RS01790	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
JO40_RS01790	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
JO40_RS01805	PF13181	Tetratricopeptide repeat
JO40_RS01805	PF13432	Tetratricopeptide repeat
JO40_RS01810	PF01812	5-formyltetrahydrofolate cyclo-ligase family
JO40_RS01820	PF00830	Ribosomal L28 family
JO40_RS01825	PF13038	JO40_RS01825
JO40_RS01830	PF00005	ABC transporter
JO40_RS01830	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS01835	PF00005	ABC transporter
JO40_RS01835	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS01850	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS01855	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS01860	PF04072	Leucine carboxyl methyltransferase
JO40_RS01865	PF02508	JO40_RS01865
JO40_RS01870	PF02508	JO40_RS01870
JO40_RS01875	PF04205	FMN-binding domain
JO40_RS01880	PF03116	JO40_RS01880
JO40_RS01885	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
JO40_RS01885	PF13375	RnfC Barrel sandwich hybrid domain
JO40_RS01895	PF13519	von Willebrand factor type A domain
JO40_RS01910	PF00391	PEP-utilising enzyme, mobile domain
JO40_RS01910	PF02896	PEP-utilising enzyme, TIM barrel domain
JO40_RS01915	PF01987	Mitochondrial biogenesis AIM24
JO40_RS01920	PF16314	JO40_RS01920
JO40_RS01925	PF03692	JO40_RS01925
JO40_RS01930	PF02592	JO40_RS01930
JO40_RS01935	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS01935	PF00672	HAMP domain
JO40_RS01935	PF02743	Cache domain
JO40_RS01945	PF00572	Ribosomal protein L13
JO40_RS01950	PF00380	Ribosomal protein S9/S16
JO40_RS01955	PF02631	RecX family
JO40_RS01960	PF00072	Response regulator receiver domain
JO40_RS01960	PF12728	Helix-turn-helix domain
JO40_RS01965	PF00596	Class II Aldolase and Adducin N-terminal domain
JO40_RS01985	PF00849	RNA pseudouridylate synthase
JO40_RS01985	PF01479	S4 domain
JO40_RS01990	PF00579	tRNA synthetases class I (W and Y)
JO40_RS01995	PF00224	Pyruvate kinase, barrel domain
JO40_RS01995	PF02887	Pyruvate kinase, alpha/beta domain
JO40_RS02000	PF01936	NYN domain
JO40_RS02000	PF12872	OST-HTH/LOTUS domain
JO40_RS02010	PF13026	Protein of unknown function (DUF3887)
JO40_RS02015	PF01875	Memo-like protein
JO40_RS02020	PF11369	JO40_RS02020
JO40_RS02025	PF01728	FtsJ-like methyltransferase
JO40_RS02040	PF02588	JO40_RS02040
JO40_RS02040	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
JO40_RS02045	PF01863	Protein of unknown function DUF45
JO40_RS02050	PF10974	JO40_RS02050
JO40_RS02055	PF01921	tRNA synthetases class I (K)
JO40_RS02060	PF01430	Hsp33 protein
JO40_RS02065	PF02570	Precorrin-8X methylmutase
JO40_RS02070	PF13847	Methyltransferase domain
JO40_RS02075	PF00583	Acetyltransferase (GNAT) family
JO40_RS02080	PF03009	Glycerophosphoryl diester phosphodiesterase family
JO40_RS02085	PF13347	MFS/sugar transport protein
JO40_RS02090	PF00708	Acylphosphatase
JO40_RS02095	PF02811	PHP domain
JO40_RS02100	PF08349	JO40_RS02100
JO40_RS02105	PF03013	Pyrimidine dimer DNA glycosylase
JO40_RS02115	PF01196	Ribosomal protein L17
JO40_RS02120	PF01000	RNA polymerase Rpb3/RpoA insert domain
JO40_RS02120	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
JO40_RS02120	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
JO40_RS02125	PF00411	Ribosomal protein S11
JO40_RS02130	PF00416	Ribosomal protein S13/S18
JO40_RS02135	PF00344	SecY translocase
JO40_RS02140	PF00828	Ribosomal protein L18e/L15
JO40_RS02145	PF00327	Ribosomal protein L30p/L7e
JO40_RS02150	PF00333	Ribosomal protein S5, N-terminal domain
JO40_RS02150	PF03719	Ribosomal protein S5, C-terminal domain
JO40_RS02155	PF00861	Ribosomal L18p/L5e family
JO40_RS02160	PF00347	Ribosomal protein L6
JO40_RS02165	PF00410	Ribosomal protein S8
JO40_RS02170	PF00281	Ribosomal protein L5
JO40_RS02170	PF00673	ribosomal L5P family C-terminus
JO40_RS02175	PF00467	KOW motif
JO40_RS02175	PF17136	JO40_RS02175
JO40_RS02180	PF00238	Ribosomal protein L14p/L23e
JO40_RS02185	PF00366	Ribosomal protein S17
JO40_RS02190	PF00831	Ribosomal L29 protein
JO40_RS02195	PF00252	Ribosomal protein L16p/L10e
JO40_RS02200	PF00189	Ribosomal protein S3, C-terminal domain
JO40_RS02200	PF07650	KH domain
JO40_RS02205	PF00237	Ribosomal protein L22p/L17e
JO40_RS02210	PF00203	Ribosomal protein S19
JO40_RS02215	PF00181	Ribosomal Proteins L2, RNA binding domain
JO40_RS02215	PF03947	Ribosomal Proteins L2, C-terminal domain
JO40_RS02220	PF00276	Ribosomal protein L23
JO40_RS02225	PF00573	Ribosomal protein L4/L1 family
JO40_RS02230	PF00297	Ribosomal protein L3
JO40_RS02235	PF00338	Ribosomal protein S10p/S20e
JO40_RS02240	PF00009	Elongation factor Tu GTP binding domain
JO40_RS02240	PF03143	Elongation factor Tu C-terminal domain
JO40_RS02240	PF03144	Elongation factor Tu domain 2
JO40_RS02250	PF03372	Endonuclease/Exonuclease/phosphatase family
JO40_RS02255	PF00270	DEAD/DEAH box helicase
JO40_RS02255	PF00271	Helicase conserved C-terminal domain
JO40_RS02255	PF17191	JO40_RS02255
JO40_RS02280	PF03577	JO40_RS02280
JO40_RS02285	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS02285	PF07695	JO40_RS02285
JO40_RS02290	PF12169	DNA polymerase III subunits gamma and tau domain III
JO40_RS02290	PF13177	DNA polymerase III, delta subunit
JO40_RS02295	PF00849	RNA pseudouridylate synthase
JO40_RS02300	PF05962	HutD
JO40_RS02305	PF01926	50S ribosome-binding GTPase
JO40_RS02310	PF00342	Phosphoglucose isomerase
JO40_RS02315	PF02127	Aminopeptidase I zinc metalloprotease (M18)
JO40_RS02320	PF00581	Rhodanese-like domain
JO40_RS02325	PF03880	DbpA RNA binding domain
JO40_RS02330	PF13347	MFS/sugar transport protein
JO40_RS02335	PF12762	JO40_RS02335
JO40_RS02340	PF03176	MMPL family
JO40_RS02345	PF17131	JO40_RS02345
JO40_RS02355	PF03390	JO40_RS02355
JO40_RS02360	PF05262	JO40_RS02360
JO40_RS02365	PF13360	PQQ-like domain
JO40_RS02370	PF02517	CAAX protease self-immunity
JO40_RS02375	PF02544	JO40_RS02375
JO40_RS02380	PF00005	ABC transporter
JO40_RS02385	PF01458	Uncharacterized protein family (UPF0051)
JO40_RS02390	PF01458	Uncharacterized protein family (UPF0051)
JO40_RS02395	PF03030	Inorganic H+ pyrophosphatase
JO40_RS02400	PF13303	JO40_RS02400
JO40_RS02415	PF00072	Response regulator receiver domain
JO40_RS02415	PF01339	CheB methylesterase
JO40_RS02420	PF01739	CheR methyltransferase, SAM binding domain
JO40_RS02420	PF03705	CheR methyltransferase, all-alpha domain
JO40_RS02430	PF03968	OstA-like protein
JO40_RS02435	PF00005	ABC transporter
JO40_RS02440	PF01195	Peptidyl-tRNA hydrolase
JO40_RS02450	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
JO40_RS02455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS02455	PF00672	HAMP domain
JO40_RS02455	PF02743	Cache domain
JO40_RS02460	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS02465	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS02465	PF12911	JO40_RS02465
JO40_RS02470	PF00005	ABC transporter
JO40_RS02470	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS02475	PF00005	ABC transporter
JO40_RS02475	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS02480	PF01545	Cation efflux family
JO40_RS02480	PF16916	JO40_RS02480
JO40_RS02485	PF02557	D-alanyl-D-alanine carboxypeptidase
JO40_RS02490	PF01740	STAS domain
JO40_RS02495	PF07228	Stage II sporulation protein E (SpoIIE)
JO40_RS02500	PF07228	Stage II sporulation protein E (SpoIIE)
JO40_RS02505	PF00226	DnaJ domain
JO40_RS02505	PF00684	DnaJ central domain
JO40_RS02505	PF01556	DnaJ C terminal domain
JO40_RS02510	PF00012	Hsp70 protein
JO40_RS02515	PF01025	GrpE
JO40_RS02520	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS02530	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS02535	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS02540	PF14734	Domain of unknown function (DUF4469) with IG-like fold
JO40_RS02540	PF14848	DNA-binding domain
JO40_RS02545	PF00005	ABC transporter
JO40_RS02550	PF02571	JO40_RS02550
JO40_RS02555	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
JO40_RS02560	PF08011	JO40_RS02560
JO40_RS02560	PF09820	JO40_RS02560
JO40_RS02565	PF04754	JO40_RS02565
JO40_RS02570	PF04055	Radical SAM superfamily
JO40_RS02575	PF01554	MatE
JO40_RS02585	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS02585	PF00672	HAMP domain
JO40_RS02585	PF02743	Cache domain
JO40_RS02590	PF01890	Cobalamin synthesis G C-terminus
JO40_RS02590	PF11760	Cobalamin synthesis G N-terminal
JO40_RS02595	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
JO40_RS02600	PF13614	AAA domain
JO40_RS02615	PF09674	JO40_RS02615
JO40_RS02620	PF00483	Nucleotidyl transferase
JO40_RS02625	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
JO40_RS02625	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
JO40_RS02630	PF00698	Acyl transferase domain
JO40_RS02640	PF01850	PIN domain
JO40_RS02645	PF13561	Enoyl-(Acyl carrier protein) reductase
JO40_RS02650	PF02384	N-6 DNA Methylase
JO40_RS02650	PF12950	TaqI-like C-terminal specificity domain
JO40_RS02660	PF07055	Enoyl reductase FAD binding domain
JO40_RS02660	PF12241	Trans-2-enoyl-CoA reductase catalytic region
JO40_RS02660	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
JO40_RS02665	PF13310	JO40_RS02665
JO40_RS02670	PF04326	Divergent AAA domain
JO40_RS02670	PF08279	HTH domain
JO40_RS02670	PF13749	ATP-dependent DNA helicase recG C-terminal
JO40_RS02680	PF00364	Biotin-requiring enzyme
JO40_RS02685	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
JO40_RS02685	PF02785	Biotin carboxylase C-terminal domain
JO40_RS02685	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
JO40_RS02690	PF01039	Carboxyl transferase domain
JO40_RS02695	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
JO40_RS02700	PF00221	Aromatic amino acid lyase
JO40_RS02705	PF03372	Endonuclease/Exonuclease/phosphatase family
JO40_RS02715	PF07726	ATPase family associated with various cellular activities (AAA)
JO40_RS02755	PF01425	Amidase
JO40_RS02760	PF02637	GatB domain
JO40_RS02760	PF02934	GatB/GatE catalytic domain
JO40_RS02785	PF14137	JO40_RS02785
JO40_RS02790	PF08974	Domain of unknown function (DUF1877)
JO40_RS02820	PF04326	Divergent AAA domain
JO40_RS02840	PF14080	JO40_RS02840
JO40_RS02845	PF12796	Ankyrin repeats (3 copies)
JO40_RS02855	PF12697	Alpha/beta hydrolase family
JO40_RS02860	PF04993	TfoX N-terminal domain
JO40_RS02870	PF00583	Acetyltransferase (GNAT) family
JO40_RS02900	PF00005	ABC transporter
JO40_RS02910	PF02498	JO40_RS02910
JO40_RS02915	PF13181	Tetratricopeptide repeat
JO40_RS02945	PF10029	JO40_RS02945
JO40_RS02950	PF09406	Protein of unknown function (DUF2004)
JO40_RS02955	PF14094	JO40_RS02955
JO40_RS02960	PF09346	SMI1 / KNR4 family (SUKH-1)
JO40_RS02980	PF10020	JO40_RS02980
JO40_RS02985	PF12796	Ankyrin repeats (3 copies)
JO40_RS03000	PF01841	Transglutaminase-like superfamily
JO40_RS03005	PF01637	Archaeal ATPase
JO40_RS03005	PF03008	JO40_RS03005
JO40_RS03020	PF13560	Helix-turn-helix domain
JO40_RS03025	PF13657	HipA N-terminal domain
JO40_RS03030	PF07804	HipA-like C-terminal domain
JO40_RS03030	PF07805	HipA-like N-terminal domain
JO40_RS03035	PF03551	Transcriptional regulator PadR-like family
JO40_RS03040	PF14399	JO40_RS03040
JO40_RS03040	PF16169	JO40_RS03040
JO40_RS03060	PF02525	Flavodoxin-like fold
JO40_RS03075	PF00005	ABC transporter
JO40_RS03075	PF00664	ABC transporter transmembrane region
JO40_RS03080	PF00005	ABC transporter
JO40_RS03080	PF00664	ABC transporter transmembrane region
JO40_RS03085	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS03105	PF00583	Acetyltransferase (GNAT) family
JO40_RS03110	PF00561	alpha/beta hydrolase fold
JO40_RS03115	PF07224	Chlorophyllase
JO40_RS03120	PF04024	JO40_RS03120
JO40_RS03130	PF00005	ABC transporter
JO40_RS03130	PF00664	ABC transporter transmembrane region
JO40_RS03135	PF00005	ABC transporter
JO40_RS03135	PF00664	ABC transporter transmembrane region
JO40_RS03140	PF01515	Phosphate acetyl/butaryl transferase
JO40_RS03145	PF07719	Tetratricopeptide repeat
JO40_RS03145	PF13181	Tetratricopeptide repeat
JO40_RS03150	PF02811	PHP domain
JO40_RS03150	PF07733	Bacterial DNA polymerase III alpha subunit
JO40_RS03150	PF14579	Helix-hairpin-helix motif
JO40_RS03155	PF02325	JO40_RS03155
JO40_RS03175	PF01432	Peptidase family M3
JO40_RS03175	PF08439	Oligopeptidase F
JO40_RS03180	PF04389	Peptidase family M28
JO40_RS03185	PF02661	Fic/DOC family
JO40_RS03185	PF13412	Winged helix-turn-helix DNA-binding
JO40_RS03195	PF01266	FAD dependent oxidoreductase
JO40_RS03195	PF04324	BFD-like [2Fe-2S] binding domain
JO40_RS03200	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS03205	PF07892	Protein of unknown function (DUF1667)
JO40_RS03215	PF00072	Response regulator receiver domain
JO40_RS03215	PF00486	Transcriptional regulatory protein, C terminal
JO40_RS03225	PF00005	ABC transporter
JO40_RS03230	PF02687	JO40_RS03230
JO40_RS03235	PF03099	Biotin/lipoate A/B protein ligase family
JO40_RS03235	PF10437	Bacterial lipoate protein ligase C-terminus
JO40_RS03245	PF00005	ABC transporter
JO40_RS03250	PF00392	Bacterial regulatory proteins, gntR family
JO40_RS03255	PF00005	ABC transporter
JO40_RS03265	PF06182	JO40_RS03265
JO40_RS03270	PF07690	Major Facilitator Superfamily
JO40_RS03275	PF00675	Insulinase (Peptidase family M16)
JO40_RS03275	PF05193	Peptidase M16 inactive domain
JO40_RS03280	PF00675	Insulinase (Peptidase family M16)
JO40_RS03280	PF05193	Peptidase M16 inactive domain
JO40_RS03285	PF06180	Cobalt chelatase (CbiK)
JO40_RS03290	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
JO40_RS03295	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
JO40_RS03295	PF07685	CobB/CobQ-like glutamine amidotransferase domain
JO40_RS03300	PF00464	Serine hydroxymethyltransferase
JO40_RS03305	PF00795	Carbon-nitrogen hydrolase
JO40_RS03310	PF00478	IMP dehydrogenase / GMP reductase domain
JO40_RS03315	PF01066	CDP-alcohol phosphatidyltransferase
JO40_RS03320	PF00953	Glycosyl transferase family 4
JO40_RS03325	PF13598	JO40_RS03325
JO40_RS03330	PF00515	Tetratricopeptide repeat
JO40_RS03330	PF04471	Restriction endonuclease
JO40_RS03330	PF13174	Tetratricopeptide repeat
JO40_RS03330	PF13181	Tetratricopeptide repeat
JO40_RS03350	PF14821	Threonine synthase N terminus
JO40_RS03360	PF02561	Flagellar protein FliS
JO40_RS03380	PF06226	JO40_RS03380
JO40_RS03385	PF01325	Iron dependent repressor, N-terminal DNA binding domain
JO40_RS03385	PF02742	Iron dependent repressor, metal binding and dimerisation domain
JO40_RS03390	PF04468	JO40_RS03390
JO40_RS03395	PF03885	Protein of unknown function (DUF327)
JO40_RS03400	PF04519	JO40_RS03400
JO40_RS03405	PF01551	Peptidase family M23
JO40_RS03410	PF01409	tRNA synthetases class II core domain (F)
JO40_RS03420	PF00128	Alpha amylase, catalytic domain
JO40_RS03430	PF12683	Protein of unknown function (DUF3798)
JO40_RS03435	PF00005	ABC transporter
JO40_RS03440	PF02653	JO40_RS03440
JO40_RS03445	PF02653	JO40_RS03445
JO40_RS03455	PF08011	JO40_RS03455
JO40_RS03455	PF09820	JO40_RS03455
JO40_RS03460	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS03460	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JO40_RS03465	PF00175	Oxidoreductase NAD-binding domain
JO40_RS03465	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
JO40_RS03470	PF01590	GAF domain
JO40_RS03470	PF01966	HD domain
JO40_RS03480	PF09723	JO40_RS03480
JO40_RS03490	PF00133	tRNA synthetases class I (I, L, M and V)
JO40_RS03490	PF08264	Anticodon-binding domain of tRNA
JO40_RS03495	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JO40_RS03510	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS03515	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS03520	PF14281	JO40_RS03520
JO40_RS03535	PF02661	Fic/DOC family
JO40_RS03535	PF13784	Fic/DOC family N-terminal
JO40_RS03540	PF09605	JO40_RS03540
JO40_RS03545	PF02361	Cobalt transport protein
JO40_RS03550	PF00005	ABC transporter
JO40_RS03555	PF00005	ABC transporter
JO40_RS03555	PF00664	ABC transporter transmembrane region
JO40_RS03565	PF03852	DNA mismatch endonuclease Vsr
JO40_RS03570	PF00145	C-5 cytosine-specific DNA methylase
JO40_RS03575	PF09565	JO40_RS03575
JO40_RS03580	PF10593	JO40_RS03580
JO40_RS03585	PF13443	Cro/C1-type HTH DNA-binding domain
JO40_RS03590	PF00005	ABC transporter
JO40_RS03590	PF00664	ABC transporter transmembrane region
JO40_RS03595	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS03600	PF04343	JO40_RS03600
JO40_RS03605	PF01613	Flavin reductase like domain
JO40_RS03610	PF01212	Beta-eliminating lyase
JO40_RS03615	PF00771	FHIPEP family
JO40_RS03625	PF01311	JO40_RS03625
JO40_RS03630	PF01313	JO40_RS03630
JO40_RS03635	PF00465	Iron-containing alcohol dehydrogenase
JO40_RS03640	PF00588	SpoU rRNA Methylase family
JO40_RS03655	PF01979	Amidohydrolase family
JO40_RS03660	PF04961	Formiminotransferase-cyclodeaminase
JO40_RS03665	PF01212	Beta-eliminating lyase
JO40_RS03670	PF08011	JO40_RS03670
JO40_RS03670	PF09820	JO40_RS03670
JO40_RS03675	PF02707	JO40_RS03675
JO40_RS03675	PF02722	JO40_RS03675
JO40_RS03680	PF04754	JO40_RS03680
JO40_RS03685	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS03690	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
JO40_RS03690	PF03466	LysR substrate binding domain
JO40_RS03695	PF00246	Zinc carboxypeptidase
JO40_RS03700	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS03705	PF00005	ABC transporter
JO40_RS03705	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS03710	PF00005	ABC transporter
JO40_RS03710	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS03715	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS03720	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS03725	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS03730	PF00107	Zinc-binding dehydrogenase
JO40_RS03730	PF08240	Alcohol dehydrogenase GroES-like domain
JO40_RS03735	PF02492	CobW/HypB/UreG, nucleotide-binding domain
JO40_RS03735	PF07683	Cobalamin synthesis protein cobW C-terminal domain
JO40_RS03740	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
JO40_RS03745	PF11823	JO40_RS03745
JO40_RS03750	PF11823	JO40_RS03750
JO40_RS03755	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
JO40_RS03770	PF13343	Bacterial extracellular solute-binding protein
JO40_RS03775	PF02971	Formiminotransferase domain
JO40_RS03775	PF07837	Formiminotransferase domain, N-terminal subdomain
JO40_RS03780	PF13343	Bacterial extracellular solute-binding protein
JO40_RS03790	PF00005	ABC transporter
JO40_RS03795	PF02661	Fic/DOC family
JO40_RS03800	PF01546	Peptidase family M20/M25/M40
JO40_RS03800	PF07687	Peptidase dimerisation domain
JO40_RS03805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS03805	PF07730	Histidine kinase
JO40_RS03810	PF00072	Response regulator receiver domain
JO40_RS03810	PF00196	Bacterial regulatory proteins, luxR family
JO40_RS03815	PF00027	Cyclic nucleotide-binding domain
JO40_RS03815	PF03631	JO40_RS03815
JO40_RS03820	PF00581	Rhodanese-like domain
JO40_RS03820	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
JO40_RS03820	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS03825	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS03825	PF07695	JO40_RS03825
JO40_RS03830	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS03830	PF07695	JO40_RS03830
JO40_RS03840	PF13146	JO40_RS03840
JO40_RS03845	PF00294	pfkB family carbohydrate kinase
JO40_RS03870	PF00255	Glutathione peroxidase
JO40_RS03875	PF00271	Helicase conserved C-terminal domain
JO40_RS03875	PF04851	Type III restriction enzyme, res subunit
JO40_RS03890	PF01381	Helix-turn-helix
JO40_RS03895	PF05015	Plasmid maintenance system killer protein
JO40_RS03905	PF03023	JO40_RS03905
JO40_RS03910	PF00317	Ribonucleotide reductase, all-alpha domain
JO40_RS03910	PF02867	Ribonucleotide reductase, barrel domain
JO40_RS03910	PF03477	ATP cone domain
JO40_RS03915	PF00274	Fructose-bisphosphate aldolase class-I
JO40_RS03940	PF01926	50S ribosome-binding GTPase
JO40_RS03940	PF06071	Protein of unknown function (DUF933)
JO40_RS03945	PF01343	Peptidase family S49
JO40_RS03950	PF01208	Uroporphyrinogen decarboxylase (URO-D)
JO40_RS03960	PF01208	Uroporphyrinogen decarboxylase (URO-D)
JO40_RS03965	PF00111	2Fe-2S iron-sulfur cluster binding domain
JO40_RS03965	PF14574	Domain of unknown function (DUF4445)
JO40_RS03970	PF02310	B12 binding domain
JO40_RS03970	PF02607	B12 binding domain
JO40_RS03975	PF00156	Phosphoribosyl transferase domain
JO40_RS03975	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
JO40_RS03980	PF00005	ABC transporter
JO40_RS03980	PF00664	ABC transporter transmembrane region
JO40_RS03985	PF00005	ABC transporter
JO40_RS03985	PF00664	ABC transporter transmembrane region
JO40_RS03990	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS03990	PF00672	HAMP domain
JO40_RS03990	PF02743	Cache domain
JO40_RS03995	PF00753	Metallo-beta-lactamase superfamily
JO40_RS04000	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
JO40_RS04005	PF01594	JO40_RS04005
JO40_RS04010	PF00268	Ribonucleotide reductase, small chain
JO40_RS04015	PF01554	MatE
JO40_RS04025	PF03616	JO40_RS04025
JO40_RS04030	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS04030	PF00672	HAMP domain
JO40_RS04030	PF02743	Cache domain
JO40_RS04035	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS04035	PF00672	HAMP domain
JO40_RS04035	PF02743	Cache domain
JO40_RS04040	PF01048	Phosphorylase superfamily
JO40_RS04045	PF01106	NifU-like domain
JO40_RS04050	PF01850	PIN domain
JO40_RS04055	PF10047	JO40_RS04055
JO40_RS04065	PF17131	JO40_RS04065
JO40_RS04070	PF03176	MMPL family
JO40_RS04080	PF12844	Helix-turn-helix domain
JO40_RS04085	PF00563	EAL domain
JO40_RS04085	PF00990	GGDEF domain
JO40_RS04085	PF02743	Cache domain
JO40_RS04090	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
JO40_RS04090	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
JO40_RS04090	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
JO40_RS04090	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
JO40_RS04095	PF00375	Sodium:dicarboxylate symporter family
JO40_RS04105	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
JO40_RS04110	PF02504	Fatty acid synthesis protein
JO40_RS04120	PF00005	ABC transporter
JO40_RS04125	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS04130	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS04135	PF01547	Bacterial extracellular solute-binding protein
JO40_RS04140	PF00013	KH domain
JO40_RS04140	PF01966	HD domain
JO40_RS04140	PF12072	JO40_RS04140
JO40_RS04150	PF00149	Calcineurin-like phosphoesterase
JO40_RS04155	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS04160	PF00392	Bacterial regulatory proteins, gntR family
JO40_RS04165	PF00005	ABC transporter
JO40_RS04175	PF08011	JO40_RS04175
JO40_RS04175	PF09820	JO40_RS04175
JO40_RS04180	PF12672	JO40_RS04180
JO40_RS04185	PF00258	Flavodoxin
JO40_RS04190	PF13860	FlgD Ig-like domain
JO40_RS04200	PF00883	Cytosol aminopeptidase family, catalytic domain
JO40_RS04200	PF02789	Cytosol aminopeptidase family, N-terminal domain
JO40_RS04205	PF01661	Macro domain
JO40_RS04210	PF00712	DNA polymerase III beta subunit, N-terminal domain
JO40_RS04210	PF02767	DNA polymerase III beta subunit, central domain
JO40_RS04210	PF02768	DNA polymerase III beta subunit, C-terminal domain
JO40_RS04215	PF02463	RecF/RecN/SMC N terminal domain
JO40_RS04245	PF04221	RelB antitoxin
JO40_RS04260	PF01850	PIN domain
JO40_RS04265	PF04221	RelB antitoxin
JO40_RS04285	PF05258	JO40_RS04285
JO40_RS04290	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
JO40_RS04290	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
JO40_RS04315	PF07238	PilZ domain
JO40_RS04320	PF04733	Coatomer epsilon subunit
JO40_RS04320	PF13432	Tetratricopeptide repeat
JO40_RS04325	PF09084	NMT1/THI5 like
JO40_RS04330	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS04335	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
JO40_RS04340	PF03600	Citrate transporter
JO40_RS04345	PF00176	SNF2 family N-terminal domain
JO40_RS04345	PF00271	Helicase conserved C-terminal domain
JO40_RS04345	PF04434	JO40_RS04345
JO40_RS04345	PF12419	JO40_RS04345
JO40_RS04350	PF08011	JO40_RS04350
JO40_RS04350	PF09820	JO40_RS04350
JO40_RS04355	PF00092	von Willebrand factor type A domain
JO40_RS04365	PF00326	Prolyl oligopeptidase family
JO40_RS04370	PF13310	JO40_RS04370
JO40_RS04375	PF02661	Fic/DOC family
JO40_RS04380	PF00892	EamA-like transporter family
JO40_RS04385	PF01925	JO40_RS04385
JO40_RS04390	PF00962	Adenosine/AMP deaminase
JO40_RS04395	PF12146	Putative lysophospholipase
JO40_RS04405	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS04410	PF00005	ABC transporter
JO40_RS04415	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS04415	PF00672	HAMP domain
JO40_RS04415	PF02743	Cache domain
JO40_RS04420	PF06149	JO40_RS04420
JO40_RS04425	PF06166	JO40_RS04425
JO40_RS04430	PF01470	Pyroglutamyl peptidase
JO40_RS04435	PF08011	JO40_RS04435
JO40_RS04435	PF09820	JO40_RS04435
JO40_RS04440	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
JO40_RS04460	PF00009	Elongation factor Tu GTP binding domain
JO40_RS04460	PF00679	Elongation factor G C-terminus
JO40_RS04460	PF03144	Elongation factor Tu domain 2
JO40_RS04460	PF03764	Elongation factor G, domain IV
JO40_RS04460	PF14492	Elongation Factor G, domain II
JO40_RS04465	PF04378	Ribosomal RNA small subunit methyltransferase D, RsmJ
JO40_RS04470	PF01554	MatE
JO40_RS04475	PF02080	TrkA-C domain
JO40_RS04475	PF02254	TrkA-N domain
JO40_RS04480	PF00521	DNA gyrase/topoisomerase IV, subunit A
JO40_RS04480	PF03989	DNA gyrase C-terminal domain, beta-propeller
JO40_RS04485	PF03471	Transporter associated domain
JO40_RS04500	PF01680	SOR/SNZ family
JO40_RS04510	PF01171	PP-loop family
JO40_RS04515	PF08972	Domain of unknown function (DUF1902)
JO40_RS04520	PF02274	Amidinotransferase
JO40_RS04525	PF04452	RNA methyltransferase
JO40_RS04530	PF04851	Type III restriction enzyme, res subunit
JO40_RS04530	PF13625	JO40_RS04530
JO40_RS04530	PF16203	JO40_RS04530
JO40_RS04540	PF02386	Cation transport protein
JO40_RS04545	PF02254	TrkA-N domain
JO40_RS04555	PF01850	PIN domain
JO40_RS04560	PF04014	Antidote-toxin recognition MazE
JO40_RS04565	PF00005	ABC transporter
JO40_RS04565	PF00664	ABC transporter transmembrane region
JO40_RS04570	PF07726	ATPase family associated with various cellular activities (AAA)
JO40_RS04575	PF00571	CBS domain
JO40_RS04575	PF01595	JO40_RS04575
JO40_RS04575	PF03471	Transporter associated domain
JO40_RS04580	PF00571	CBS domain
JO40_RS04580	PF01595	JO40_RS04580
JO40_RS04580	PF03471	Transporter associated domain
JO40_RS04585	PF00543	Nitrogen regulatory protein P-II
JO40_RS04590	PF07556	JO40_RS04590
JO40_RS04595	PF00270	DEAD/DEAH box helicase
JO40_RS04595	PF00271	Helicase conserved C-terminal domain
JO40_RS04595	PF00570	HRDC domain
JO40_RS04595	PF09382	RQC domain
JO40_RS04595	PF16124	JO40_RS04595
JO40_RS04600	PF13395	HNH endonuclease
JO40_RS04600	PF16592	JO40_RS04600
JO40_RS04600	PF16593	JO40_RS04600
JO40_RS04600	PF16595	JO40_RS04600
JO40_RS04605	PF01867	CRISPR associated protein Cas1
JO40_RS04610	PF09827	CRISPR associated protein Cas2
JO40_RS04615	PF09711	CRISPR-associated protein (Cas_Csn2)
JO40_RS04620	PF12728	Helix-turn-helix domain
JO40_RS04625	PF00005	ABC transporter
JO40_RS04640	PF08245	Mur ligase middle domain
JO40_RS04655	PF12146	Putative lysophospholipase
JO40_RS04660	PF00005	ABC transporter
JO40_RS04660	PF00664	ABC transporter transmembrane region
JO40_RS04665	PF00005	ABC transporter
JO40_RS04665	PF00664	ABC transporter transmembrane region
JO40_RS04670	PF00534	Glycosyl transferases group 1
JO40_RS04675	PF00005	ABC transporter
JO40_RS04680	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS04685	PF00990	GGDEF domain
JO40_RS04690	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
JO40_RS04690	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS04695	PF01565	FAD binding domain
JO40_RS04695	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
JO40_RS04700	PF01406	tRNA synthetases class I (C) catalytic domain
JO40_RS04700	PF09190	DALR domain
JO40_RS04705	PF04542	Sigma-70 region 2
JO40_RS04705	PF08281	Sigma-70, region 4
JO40_RS04710	PF13490	Putative zinc-finger
JO40_RS04715	PF01833	IPT/TIG domain
JO40_RS04715	PF01841	Transglutaminase-like superfamily
JO40_RS04720	PF02386	Cation transport protein
JO40_RS04725	PF02080	TrkA-C domain
JO40_RS04725	PF02254	TrkA-N domain
JO40_RS04730	PF12705	PD-(D/E)XK nuclease superfamily
JO40_RS04750	PF04055	Radical SAM superfamily
JO40_RS04750	PF13186	Iron-sulfur cluster-binding domain
JO40_RS04750	PF13394	4Fe-4S single cluster domain
JO40_RS04755	PF04909	Amidohydrolase
JO40_RS04760	PF13306	Leucine rich repeats (6 copies)
JO40_RS04765	PF08011	JO40_RS04765
JO40_RS04770	PF12705	PD-(D/E)XK nuclease superfamily
JO40_RS04780	PF00588	SpoU rRNA Methylase family
JO40_RS04780	PF08032	RNA 2'-O ribose methyltransferase substrate binding
JO40_RS04790	PF12784	JO40_RS04790
JO40_RS04795	PF01554	MatE
JO40_RS04810	PF00158	Sigma-54 interaction domain
JO40_RS04825	PF13432	Tetratricopeptide repeat
JO40_RS04830	PF00834	Ribulose-phosphate 3 epimerase family
JO40_RS04840	PF02223	Thymidylate kinase
JO40_RS04845	PF04357	JO40_RS04845
JO40_RS04850	PF01103	Surface antigen
JO40_RS04850	PF07244	Surface antigen variable number repeat
JO40_RS04855	PF03938	Outer membrane protein (OmpH-like)
JO40_RS04860	PF00488	MutS domain V
JO40_RS04860	PF01624	MutS domain I
JO40_RS04860	PF05188	MutS domain II
JO40_RS04860	PF05190	MutS family domain IV
JO40_RS04860	PF05192	MutS domain III
JO40_RS04865	PF02368	Bacterial Ig-like domain (group 2)
JO40_RS04865	PF09028	Mac 1
JO40_RS04870	PF00005	ABC transporter
JO40_RS04880	PF06182	JO40_RS04880
JO40_RS04885	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS04885	PF00672	HAMP domain
JO40_RS04885	PF02743	Cache domain
JO40_RS04900	PF13437	HlyD family secretion protein
JO40_RS04905	PF02321	Outer membrane efflux protein
JO40_RS04910	PF02321	Outer membrane efflux protein
JO40_RS04915	PF06541	JO40_RS04915
JO40_RS04920	PF01120	Alpha-L-fucosidase
JO40_RS04925	PF08011	JO40_RS04925
JO40_RS04925	PF09820	JO40_RS04925
JO40_RS04930	PF03063	Prismane/CO dehydrogenase family
JO40_RS04935	PF00027	Cyclic nucleotide-binding domain
JO40_RS04935	PF13545	Crp-like helix-turn-helix domain
JO40_RS04940	PF08984	Domain of unknown function (DUF1858)
JO40_RS04940	PF13343	Bacterial extracellular solute-binding protein
JO40_RS04945	PF03099	Biotin/lipoate A/B protein ligase family
JO40_RS04945	PF08279	HTH domain
JO40_RS04950	PF00501	AMP-binding enzyme
JO40_RS04950	PF13193	AMP-binding enzyme C-terminal domain
JO40_RS04955	PF00109	Beta-ketoacyl synthase, N-terminal domain
JO40_RS04955	PF02801	Beta-ketoacyl synthase, C-terminal domain
JO40_RS04960	PF04014	Antidote-toxin recognition MazE
JO40_RS04965	PF13470	JO40_RS04965
JO40_RS04970	PF03372	Endonuclease/Exonuclease/phosphatase family
JO40_RS04980	PF10117	JO40_RS04980
JO40_RS04985	PF00326	Prolyl oligopeptidase family
JO40_RS04990	PF00128	Alpha amylase, catalytic domain
JO40_RS04990	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
JO40_RS04995	PF00027	Cyclic nucleotide-binding domain
JO40_RS04995	PF13581	Histidine kinase-like ATPase domain
JO40_RS05000	PF00266	Aminotransferase class-V
JO40_RS05005	PF01761	3-dehydroquinate synthase
JO40_RS05010	PF01048	Phosphorylase superfamily
JO40_RS05015	PF06089	JO40_RS05015
JO40_RS05020	PF00005	ABC transporter
JO40_RS05020	PF00664	ABC transporter transmembrane region
JO40_RS05030	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
JO40_RS05035	PF04316	Anti-sigma-28 factor, FlgM
JO40_RS05045	PF00749	tRNA synthetases class I (E and Q), catalytic domain
JO40_RS05050	PF08309	JO40_RS05050
JO40_RS05055	PF02595	Glycerate kinase family
JO40_RS05060	PF00122	E1-E2 ATPase
JO40_RS05060	PF00403	Heavy-metal-associated domain
JO40_RS05060	PF00702	haloacid dehalogenase-like hydrolase
JO40_RS05065	PF13189	Cytidylate kinase-like family
JO40_RS05070	PF00293	NUDIX domain
JO40_RS05075	PF00210	Ferritin-like domain
JO40_RS05080	PF00578	AhpC/TSA family
JO40_RS05080	PF10417	C-terminal domain of 1-Cys peroxiredoxin
JO40_RS05085	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
JO40_RS05085	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
JO40_RS05100	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS05100	PF12002	MgsA AAA+ ATPase C terminal
JO40_RS05100	PF16193	JO40_RS05100
JO40_RS05105	PF05343	M42 glutamyl aminopeptidase
JO40_RS05110	PF01476	LysM domain
JO40_RS05120	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
JO40_RS05120	PF03129	Anticodon binding domain
JO40_RS05125	PF01066	CDP-alcohol phosphatidyltransferase
JO40_RS05135	PF00583	Acetyltransferase (GNAT) family
JO40_RS05140	PF00933	Glycosyl hydrolase family 3 N terminal domain
JO40_RS05155	PF01963	JO40_RS05155
JO40_RS05160	PF01368	DHH family
JO40_RS05160	PF02272	DHHA1 domain
JO40_RS05165	PF00005	ABC transporter
JO40_RS05170	PF00005	ABC transporter
JO40_RS05180	PF12784	JO40_RS05180
JO40_RS05185	PF08241	Methyltransferase domain
JO40_RS05190	PF14501	GHKL domain
JO40_RS05190	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
JO40_RS05225	PF02229	Transcriptional Coactivator p15 (PC4)
JO40_RS05235	PF04993	TfoX N-terminal domain
JO40_RS05245	PF12724	Flavodoxin domain
JO40_RS05250	PF00005	ABC transporter
JO40_RS05255	PF02361	Cobalt transport protein
JO40_RS05260	PF09605	JO40_RS05260
JO40_RS05265	PF08241	Methyltransferase domain
JO40_RS05275	PF00912	Transglycosylase
JO40_RS05280	PF13302	Acetyltransferase (GNAT) domain
JO40_RS05285	PF14384	JO40_RS05285
JO40_RS05290	PF13470	JO40_RS05290
JO40_RS05300	PF13419	Haloacid dehalogenase-like hydrolase
JO40_RS05310	PF14196	JO40_RS05310
JO40_RS05320	PF00005	ABC transporter
JO40_RS05320	PF00664	ABC transporter transmembrane region
JO40_RS05325	PF02517	CAAX protease self-immunity
JO40_RS05330	PF13023	HD domain
JO40_RS05335	PF14358	JO40_RS05335
JO40_RS05340	PF12682	Flavodoxin
JO40_RS05345	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS05350	PF00583	Acetyltransferase (GNAT) family
JO40_RS05370	PF02517	CAAX protease self-immunity
JO40_RS05375	PF08713	DNA alkylation repair enzyme
JO40_RS05380	PF04221	RelB antitoxin
JO40_RS05385	PF00005	ABC transporter
JO40_RS05390	PF02361	Cobalt transport protein
JO40_RS05395	PF09605	JO40_RS05395
JO40_RS05400	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS05415	PF01243	Pyridoxamine 5'-phosphate oxidase
JO40_RS05420	PF01661	Macro domain
JO40_RS05425	PF02146	Sir2 family
JO40_RS05430	PF02082	Transcriptional regulator
JO40_RS05440	PF00990	GGDEF domain
JO40_RS05445	PF01694	Rhomboid family
JO40_RS05455	PF01207	Dihydrouridine synthase (Dus)
JO40_RS05460	PF00884	Sulfatase
JO40_RS05470	PF14257	JO40_RS05470
JO40_RS05490	PF04539	Sigma-70 region 3
JO40_RS05490	PF04542	Sigma-70 region 2
JO40_RS05490	PF04545	Sigma-70, region 4
JO40_RS05500	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
JO40_RS05505	PF00448	SRP54-type protein, GTPase domain
JO40_RS05510	PF00155	Aminotransferase class I and II
JO40_RS05520	PF12680	SnoaL-like domain
JO40_RS05525	PF11070	JO40_RS05525
JO40_RS05530	PF12784	JO40_RS05530
JO40_RS05535	PF02120	Flagellar hook-length control protein FliK
JO40_RS05540	PF03963	JO40_RS05540
JO40_RS05545	PF00460	Flagella basal body rod protein
JO40_RS05545	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
JO40_RS05545	PF07559	Flagellar basal body protein FlaE
JO40_RS05550	PF06289	JO40_RS05550
JO40_RS05555	PF01618	JO40_RS05555
JO40_RS05560	PF00691	OmpA family
JO40_RS05560	PF13677	JO40_RS05560
JO40_RS05565	PF03748	JO40_RS05565
JO40_RS05570	PF01052	Surface presentation of antigens (SPOA)
JO40_RS05570	PF02154	Flagellar motor switch protein FliM
JO40_RS05575	PF01052	Surface presentation of antigens (SPOA)
JO40_RS05580	PF04347	JO40_RS05580
JO40_RS05585	PF00813	JO40_RS05585
JO40_RS05590	PF01850	PIN domain
JO40_RS05605	PF13181	Tetratricopeptide repeat
JO40_RS05610	PF14384	JO40_RS05610
JO40_RS05615	PF04365	Protein of unknown function (DUF497)
JO40_RS05625	PF02423	Ornithine cyclodeaminase/mu-crystallin family
JO40_RS05630	PF01476	LysM domain
JO40_RS05630	PF01551	Peptidase family M23
JO40_RS05635	PF00462	Glutaredoxin
JO40_RS05650	PF01926	50S ribosome-binding GTPase
JO40_RS05650	PF13167	JO40_RS05650
JO40_RS05650	PF16360	JO40_RS05650
JO40_RS05655	PF13673	Acetyltransferase (GNAT) domain
JO40_RS05660	PF01432	Peptidase family M3
JO40_RS05665	PF01207	Dihydrouridine synthase (Dus)
JO40_RS05670	PF01026	TatD related DNase
JO40_RS05675	PF07947	JO40_RS05675
JO40_RS05680	PF00027	Cyclic nucleotide-binding domain
JO40_RS05680	PF00990	GGDEF domain
JO40_RS05685	PF00027	Cyclic nucleotide-binding domain
JO40_RS05685	PF00990	GGDEF domain
JO40_RS05690	PF04326	Divergent AAA domain
JO40_RS05690	PF13749	ATP-dependent DNA helicase recG C-terminal
JO40_RS05700	PF16481	JO40_RS05700
JO40_RS05705	PF00204	DNA gyrase B
JO40_RS05705	PF00986	DNA gyrase B subunit, carboxyl terminus
JO40_RS05705	PF01751	Toprim domain
JO40_RS05705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS05710	PF00308	Bacterial dnaA  protein
JO40_RS05710	PF08299	Bacterial dnaA protein helix-turn-helix
JO40_RS05710	PF11638	DnaA N-terminal domain
JO40_RS05715	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS05715	PF01434	Peptidase family M41
JO40_RS05715	PF06480	FtsH Extracellular
JO40_RS05720	PF00583	Acetyltransferase (GNAT) family
JO40_RS05730	PF00122	E1-E2 ATPase
JO40_RS05730	PF00702	haloacid dehalogenase-like hydrolase
JO40_RS05750	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS05755	PF12784	JO40_RS05755
JO40_RS05760	PF00005	ABC transporter
JO40_RS05765	PF02492	CobW/HypB/UreG, nucleotide-binding domain
JO40_RS05770	PF02086	D12 class N6 adenine-specific DNA methyltransferase
JO40_RS05775	PF07690	Major Facilitator Superfamily
JO40_RS05780	PF00881	Nitroreductase family
JO40_RS05785	PF01625	Peptide methionine sulfoxide reductase
JO40_RS05785	PF01641	SelR domain
JO40_RS05790	PF12821	JO40_RS05790
JO40_RS05795	PF06738	JO40_RS05795
JO40_RS05800	PF02357	Transcription termination factor nusG
JO40_RS05805	PF02719	Polysaccharide biosynthesis protein
JO40_RS05810	PF03572	Peptidase family S41
JO40_RS05820	PF02517	CAAX protease self-immunity
JO40_RS05830	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
JO40_RS05835	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
JO40_RS05835	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
JO40_RS05840	PF00111	2Fe-2S iron-sulfur cluster binding domain
JO40_RS05840	PF01799	[2Fe-2S] binding domain
JO40_RS05845	PF00941	FAD binding domain in molybdopterin dehydrogenase
JO40_RS05850	PF06144	DNA polymerase III, delta subunit
JO40_RS05890	PF00171	Aldehyde dehydrogenase family
JO40_RS05895	PF01381	Helix-turn-helix
JO40_RS05895	PF07883	Cupin domain
JO40_RS05900	PF07355	JO40_RS05900
JO40_RS05910	PF09338	JO40_RS05910
JO40_RS05915	PF01791	DeoC/LacD family aldolase
JO40_RS05920	PF00107	Zinc-binding dehydrogenase
JO40_RS05920	PF08240	Alcohol dehydrogenase GroES-like domain
JO40_RS05925	PF13520	Amino acid permease
JO40_RS05930	PF01687	Riboflavin kinase
JO40_RS05930	PF06574	FAD synthetase
JO40_RS05935	PF00391	PEP-utilising enzyme, mobile domain
JO40_RS05935	PF02896	PEP-utilising enzyme, TIM barrel domain
JO40_RS05935	PF05524	PEP-utilising enzyme, N-terminal
JO40_RS05940	PF01926	50S ribosome-binding GTPase
JO40_RS05940	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
JO40_RS05945	PF13411	MerR HTH family regulatory protein
JO40_RS05950	PF09243	JO40_RS05950
JO40_RS05955	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS05955	PF00672	HAMP domain
JO40_RS05955	PF14827	Sensory domain of two-component sensor kinase
JO40_RS05960	PF01136	JO40_RS05960
JO40_RS05965	PF00005	ABC transporter
JO40_RS05965	PF00664	ABC transporter transmembrane region
JO40_RS05970	PF00140	Sigma-70 factor, region 1
JO40_RS05970	PF04542	Sigma-70 region 2
JO40_RS05970	PF04545	Sigma-70, region 4
JO40_RS05975	PF04055	Radical SAM superfamily
JO40_RS05975	PF13353	4Fe-4S single cluster domain
JO40_RS05980	PF01546	Peptidase family M20/M25/M40
JO40_RS05980	PF07687	Peptidase dimerisation domain
JO40_RS05985	PF00027	Cyclic nucleotide-binding domain
JO40_RS05995	PF02643	Uncharacterized ACR, COG1430
JO40_RS06000	PF00365	Phosphofructokinase
JO40_RS06010	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JO40_RS06030	PF01715	IPP transferase
JO40_RS06045	PF01435	Peptidase family M48
JO40_RS06050	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS06050	PF05226	JO40_RS06050
JO40_RS06055	PF09710	JO40_RS06055
JO40_RS06060	PF09710	JO40_RS06060
JO40_RS06070	PF09710	JO40_RS06070
JO40_RS06075	PF09710	JO40_RS06075
JO40_RS06100	PF00515	Tetratricopeptide repeat
JO40_RS06100	PF13181	Tetratricopeptide repeat
JO40_RS06100	PF13432	Tetratricopeptide repeat
JO40_RS06105	PF00515	Tetratricopeptide repeat
JO40_RS06105	PF13181	Tetratricopeptide repeat
JO40_RS06115	PF00515	Tetratricopeptide repeat
JO40_RS06115	PF13181	Tetratricopeptide repeat
JO40_RS06115	PF13432	Tetratricopeptide repeat
JO40_RS06120	PF00515	Tetratricopeptide repeat
JO40_RS06120	PF13181	Tetratricopeptide repeat
JO40_RS06120	PF13432	Tetratricopeptide repeat
JO40_RS06130	PF00515	Tetratricopeptide repeat
JO40_RS06130	PF13181	Tetratricopeptide repeat
JO40_RS06130	PF13414	TPR repeat
JO40_RS06140	PF00515	Tetratricopeptide repeat
JO40_RS06140	PF13181	Tetratricopeptide repeat
JO40_RS06145	PF02915	Rubrerythrin
JO40_RS06150	PF00270	DEAD/DEAH box helicase
JO40_RS06150	PF00271	Helicase conserved C-terminal domain
JO40_RS06155	PF02565	Recombination protein O C terminal
JO40_RS06160	PF13646	HEAT repeats
JO40_RS06165	PF01702	Queuine tRNA-ribosyltransferase
JO40_RS06175	PF01381	Helix-turn-helix
JO40_RS06180	PF05016	Plasmid stabilisation system protein
JO40_RS06200	PF00041	Fibronectin type III domain
JO40_RS06200	PF13385	Concanavalin A-like lectin/glucanases superfamily
JO40_RS06205	PF00515	Tetratricopeptide repeat
JO40_RS06205	PF13181	Tetratricopeptide repeat
JO40_RS06205	PF13429	Tetratricopeptide repeat
JO40_RS06210	PF01791	DeoC/LacD family aldolase
JO40_RS06215	PF00210	Ferritin-like domain
JO40_RS06220	PF00005	ABC transporter
JO40_RS06225	PF06182	JO40_RS06225
JO40_RS06230	PF06182	JO40_RS06230
JO40_RS06235	PF01546	Peptidase family M20/M25/M40
JO40_RS06235	PF07687	Peptidase dimerisation domain
JO40_RS06240	PF00571	CBS domain
JO40_RS06240	PF01769	Divalent cation transporter
JO40_RS06240	PF03448	MgtE intracellular N domain
JO40_RS06250	PF13419	Haloacid dehalogenase-like hydrolase
JO40_RS06255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS06260	PF00085	Thioredoxin
JO40_RS06265	PF04723	JO40_RS06265
JO40_RS06270	PF04723	JO40_RS06270
JO40_RS06275	PF00005	ABC transporter
JO40_RS06280	PF01032	FecCD transport family
JO40_RS06285	PF01497	Periplasmic binding protein
JO40_RS06295	PF07728	AAA domain (dynein-related subfamily)
JO40_RS06295	PF13519	von Willebrand factor type A domain
JO40_RS06300	PF07728	AAA domain (dynein-related subfamily)
JO40_RS06305	PF13744	Helix-turn-helix domain
JO40_RS06315	PF01420	Type I restriction modification DNA specificity domain
JO40_RS06320	PF12710	haloacid dehalogenase-like hydrolase
JO40_RS06325	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
JO40_RS06325	PF04851	Type III restriction enzyme, res subunit
JO40_RS06325	PF11867	JO40_RS06325
JO40_RS06330	PF03553	JO40_RS06330
JO40_RS06335	PF01066	CDP-alcohol phosphatidyltransferase
JO40_RS06340	PF02229	Transcriptional Coactivator p15 (PC4)
JO40_RS06350	PF00793	DAHP synthetase I family
JO40_RS06355	PF02568	Thiamine biosynthesis protein (ThiI)
JO40_RS06355	PF02926	THUMP domain
JO40_RS06380	PF00950	JO40_RS06380
JO40_RS06385	PF00005	ABC transporter
JO40_RS06390	PF12784	JO40_RS06390
JO40_RS06395	PF00005	ABC transporter
JO40_RS06395	PF00664	ABC transporter transmembrane region
JO40_RS06400	PF00005	ABC transporter
JO40_RS06400	PF00664	ABC transporter transmembrane region
JO40_RS06420	PF01850	PIN domain
JO40_RS06430	PF01245	Ribosomal protein L19
JO40_RS06435	PF01746	tRNA (Guanine-1)-methyltransferase
JO40_RS06440	PF01782	RimM N-terminal domain
JO40_RS06445	PF13083	KH domain
JO40_RS06450	PF00886	Ribosomal protein S16
JO40_RS06455	PF02277	Phosphoribosyltransferase
JO40_RS06465	PF09957	JO40_RS06465
JO40_RS06470	PF00005	ABC transporter
JO40_RS06470	PF02687	JO40_RS06470
JO40_RS06475	PF00005	ABC transporter
JO40_RS06475	PF02687	JO40_RS06475
JO40_RS06480	PF00849	RNA pseudouridylate synthase
JO40_RS06480	PF01479	S4 domain
JO40_RS06490	PF02616	ScpA/B protein
JO40_RS06495	PF00154	recA bacterial DNA recombination protein
JO40_RS06505	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
JO40_RS06510	PF00999	Sodium/hydrogen exchanger family
JO40_RS06520	PF12784	JO40_RS06520
JO40_RS06535	PF11680	Protein of unknown function (DUF3276)
JO40_RS06540	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
JO40_RS06540	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
JO40_RS06545	PF02308	JO40_RS06545
JO40_RS06555	PF13563	2'-5' RNA ligase superfamily
JO40_RS06560	PF02384	N-6 DNA Methylase
JO40_RS06560	PF07669	Eco57I restriction-modification methylase
JO40_RS06560	PF12950	TaqI-like C-terminal specificity domain
JO40_RS06565	PF02588	JO40_RS06565
JO40_RS06565	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
JO40_RS06570	PF01554	MatE
JO40_RS06575	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS06575	PF05226	JO40_RS06575
JO40_RS06580	PF00871	Acetokinase family
JO40_RS06585	PF13365	Trypsin-like peptidase domain
JO40_RS06600	PF00166	Chaperonin 10 Kd subunit
JO40_RS06605	PF00140	Sigma-70 factor, region 1
JO40_RS06605	PF04539	Sigma-70 region 3
JO40_RS06605	PF04542	Sigma-70 region 2
JO40_RS06605	PF04545	Sigma-70, region 4
JO40_RS06610	PF01170	Putative RNA methylase family UPF0020
JO40_RS06610	PF02926	THUMP domain
JO40_RS06615	PF01963	JO40_RS06615
JO40_RS06625	PF00877	NlpC/P60 family
JO40_RS06630	PF00501	AMP-binding enzyme
JO40_RS06640	PF00009	Elongation factor Tu GTP binding domain
JO40_RS06640	PF00679	Elongation factor G C-terminus
JO40_RS06640	PF03764	Elongation factor G, domain IV
JO40_RS06640	PF14492	Elongation Factor G, domain II
JO40_RS06645	PF09605	JO40_RS06645
JO40_RS06650	PF02361	Cobalt transport protein
JO40_RS06655	PF03417	Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
JO40_RS06660	PF00892	EamA-like transporter family
JO40_RS06670	PF01613	Flavin reductase like domain
JO40_RS06675	PF00583	Acetyltransferase (GNAT) family
JO40_RS06680	PF04851	Type III restriction enzyme, res subunit
JO40_RS06680	PF08463	JO40_RS06680
JO40_RS06685	PF02384	N-6 DNA Methylase
JO40_RS06685	PF12161	HsdM N-terminal domain
JO40_RS06690	PF02661	Fic/DOC family
JO40_RS06700	PF00589	Phage integrase family
JO40_RS06705	PF01420	Type I restriction modification DNA specificity domain
JO40_RS06710	PF01420	Type I restriction modification DNA specificity domain
JO40_RS06720	PF00465	Iron-containing alcohol dehydrogenase
JO40_RS06725	PF08020	Protein of unknown function (DUF1706)
JO40_RS06730	PF04055	Radical SAM superfamily
JO40_RS06735	PF12146	Putative lysophospholipase
JO40_RS06750	PF02567	Phenazine biosynthesis-like protein
JO40_RS06755	PF03358	NADPH-dependent FMN reductase
JO40_RS06765	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
JO40_RS06765	PF03466	LysR substrate binding domain
JO40_RS06770	PF00248	Aldo/keto reductase family
JO40_RS06780	PF12682	Flavodoxin
JO40_RS06785	PF00326	Prolyl oligopeptidase family
JO40_RS06790	PF12682	Flavodoxin
JO40_RS06815	PF12844	Helix-turn-helix domain
JO40_RS06820	PF01555	DNA methylase
JO40_RS06820	PF12564	JO40_RS06820
JO40_RS06825	PF04851	Type III restriction enzyme, res subunit
JO40_RS06830	PF02525	Flavodoxin-like fold
JO40_RS06835	PF02558	Ketopantoate reductase PanE/ApbA
JO40_RS06845	PF02502	Ribose/Galactose Isomerase
JO40_RS06850	PF00056	lactate/malate dehydrogenase, NAD binding domain
JO40_RS06850	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
JO40_RS06855	PF01554	MatE
JO40_RS06860	PF00391	PEP-utilising enzyme, mobile domain
JO40_RS06860	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
JO40_RS06865	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS06870	PF03548	Outer membrane lipoprotein carrier protein LolA
JO40_RS06875	PF13413	Helix-turn-helix domain
JO40_RS06880	PF00919	Uncharacterized protein family UPF0004
JO40_RS06880	PF04055	Radical SAM superfamily
JO40_RS06890	PF13539	D-alanyl-D-alanine carboxypeptidase
JO40_RS06895	PF10107	JO40_RS06895
JO40_RS06900	PF02424	ApbE family
JO40_RS06905	PF01252	JO40_RS06905
JO40_RS06910	PF00027	Cyclic nucleotide-binding domain
JO40_RS06910	PF13545	Crp-like helix-turn-helix domain
JO40_RS06915	PF00027	Cyclic nucleotide-binding domain
JO40_RS06915	PF13432	Tetratricopeptide repeat
JO40_RS06920	PF02811	PHP domain
JO40_RS06925	PF05958	tRNA (Uracil-5-)-methyltransferase
JO40_RS06930	PF01206	Sulfurtransferase TusA
JO40_RS06935	PF11823	JO40_RS06935
JO40_RS06940	PF00266	Aminotransferase class-V
JO40_RS06945	PF02355	Protein export membrane protein
JO40_RS06950	PF02355	Protein export membrane protein
JO40_RS06955	PF02699	Preprotein translocase subunit
JO40_RS06960	PF00436	Single-strand binding protein family
JO40_RS06965	PF00106	short chain dehydrogenase
JO40_RS06970	PF01259	SAICAR synthetase
JO40_RS06975	PF00731	AIR carboxylase
JO40_RS06985	PF01636	Phosphotransferase enzyme family
JO40_RS06990	PF03054	tRNA methyl transferase
JO40_RS06995	PF03572	Peptidase family S41
JO40_RS07000	PF08543	Phosphomethylpyrimidine kinase
JO40_RS07010	PF00005	ABC transporter
JO40_RS07010	PF13732	JO40_RS07010
JO40_RS07020	PF12698	ABC-2 family transporter protein
JO40_RS07030	PF01175	Urocanase
JO40_RS07035	PF04055	Radical SAM superfamily
JO40_RS07035	PF13394	4Fe-4S single cluster domain
JO40_RS07045	PF00300	Histidine phosphatase superfamily (branch 1)
JO40_RS07050	PF01541	GIY-YIG catalytic domain
JO40_RS07050	PF02151	UvrB/uvrC motif
JO40_RS07050	PF08459	UvrC Helix-hairpin-helix N-terminal
JO40_RS07050	PF12826	Helix-hairpin-helix motif
JO40_RS07055	PF08011	JO40_RS07055
JO40_RS07055	PF09820	JO40_RS07055
JO40_RS07060	PF03841	L-seryl-tRNA selenium transferase
JO40_RS07065	PF01613	Flavin reductase like domain
JO40_RS07075	PF16576	JO40_RS07075
JO40_RS07080	PF02687	JO40_RS07080
JO40_RS07080	PF12704	MacB-like periplasmic core domain
JO40_RS07085	PF00152	tRNA synthetases class II (D, K and N)
JO40_RS07095	PF01476	LysM domain
JO40_RS07100	PF01464	Transglycosylase SLT domain
JO40_RS07105	PF08668	HDOD domain
JO40_RS07110	PF02146	Sir2 family
JO40_RS07115	PF13367	JO40_RS07115
JO40_RS07120	PF01416	tRNA pseudouridine synthase
JO40_RS07125	PF09986	JO40_RS07125
JO40_RS07135	PF01725	Ham1 family
JO40_RS07140	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS07140	PF00672	HAMP domain
JO40_RS07140	PF02743	Cache domain
JO40_RS07160	PF14734	Domain of unknown function (DUF4469) with IG-like fold
JO40_RS07160	PF14848	DNA-binding domain
JO40_RS07180	PF04754	JO40_RS07180
JO40_RS07185	PF04754	JO40_RS07185
JO40_RS07190	PF00005	ABC transporter
JO40_RS07190	PF00664	ABC transporter transmembrane region
JO40_RS07200	PF01136	JO40_RS07200
JO40_RS07205	PF03932	CutC family
JO40_RS07210	PF12784	JO40_RS07210
JO40_RS07215	PF12784	JO40_RS07215
JO40_RS07230	PF03781	Sulfatase-modifying factor enzyme 1
JO40_RS07235	PF04365	Protein of unknown function (DUF497)
JO40_RS07245	PF12784	JO40_RS07245
JO40_RS07255	PF07075	Protein of unknown function (DUF1343)
JO40_RS07270	PF00497	Bacterial extracellular solute-binding proteins, family 3
JO40_RS07275	PF00497	Bacterial extracellular solute-binding proteins, family 3
JO40_RS07280	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
JO40_RS07280	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
JO40_RS07285	PF00448	SRP54-type protein, GTPase domain
JO40_RS07285	PF02881	SRP54-type protein, helical bundle domain
JO40_RS07285	PF02978	Signal peptide binding domain
JO40_RS07290	PF01258	Prokaryotic dksA/traR C4-type zinc finger
JO40_RS07295	PF01176	Translation initiation factor 1A / IF-1
JO40_RS07300	PF00226	DnaJ domain
JO40_RS07305	PF00696	Amino acid kinase family
JO40_RS07310	PF00588	SpoU rRNA Methylase family
JO40_RS07315	PF01740	STAS domain
JO40_RS07320	PF10646	JO40_RS07320
JO40_RS07325	PF00575	S1 RNA binding domain
JO40_RS07325	PF02224	Cytidylate kinase
JO40_RS07330	PF00158	Sigma-54 interaction domain
JO40_RS07330	PF02954	Bacterial regulatory protein, Fis family
JO40_RS07330	PF13185	GAF domain
JO40_RS07335	PF13174	Tetratricopeptide repeat
JO40_RS07335	PF13424	Tetratricopeptide repeat
JO40_RS07345	PF13416	Bacterial extracellular solute-binding protein
JO40_RS07350	PF00563	EAL domain
JO40_RS07350	PF00990	GGDEF domain
JO40_RS07355	PF04055	Radical SAM superfamily
JO40_RS07355	PF13394	4Fe-4S single cluster domain
JO40_RS07360	PF00515	Tetratricopeptide repeat
JO40_RS07360	PF13181	Tetratricopeptide repeat
JO40_RS07360	PF13432	Tetratricopeptide repeat
JO40_RS07360	PF14559	Tetratricopeptide repeat
JO40_RS07380	PF01042	Endoribonuclease L-PSP
JO40_RS07390	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
JO40_RS07410	PF00005	ABC transporter
JO40_RS07415	PF12698	ABC-2 family transporter protein
JO40_RS07420	PF12698	ABC-2 family transporter protein
JO40_RS07425	PF07730	Histidine kinase
JO40_RS07430	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS07430	PF02861	Clp amino terminal domain
JO40_RS07430	PF07724	AAA domain (Cdc48 subfamily)
JO40_RS07430	PF10431	C-terminal, D2-small domain, of ClpB protein
JO40_RS07440	PF05016	Plasmid stabilisation system protein
JO40_RS07450	PF02698	DUF218 domain
JO40_RS07455	PF03572	Peptidase family S41
JO40_RS07460	PF01132	Elongation factor P (EF-P) OB domain
JO40_RS07460	PF08207	Elongation factor P (EF-P) KOW-like domain
JO40_RS07460	PF09285	Elongation factor P, C-terminal
JO40_RS07470	PF01026	TatD related DNase
JO40_RS07475	PF13277	YmdB-like protein
JO40_RS07485	PF00817	impB/mucB/samB family
JO40_RS07485	PF11798	IMS family HHH motif
JO40_RS07485	PF11799	impB/mucB/samB family C-terminal domain
JO40_RS07505	PF07009	Protein of unknown function (DUF1312)
JO40_RS07510	PF01734	Patatin-like phospholipase
JO40_RS07515	PF03009	Glycerophosphoryl diester phosphodiesterase family
JO40_RS07520	PF04536	TLP18
JO40_RS07525	PF04011	LemA family
JO40_RS07530	PF00750	tRNA synthetases class I (R)
JO40_RS07530	PF03485	Arginyl tRNA synthetase N terminal domain
JO40_RS07530	PF05746	DALR anticodon binding domain
JO40_RS07535	PF00156	Phosphoribosyl transferase domain
JO40_RS07540	PF04002	RadC-like JAB domain
JO40_RS07545	PF00768	D-alanyl-D-alanine carboxypeptidase
JO40_RS07545	PF07943	Penicillin-binding protein 5, C-terminal domain
JO40_RS07555	PF01180	Dihydroorotate dehydrogenase
JO40_RS07560	PF01226	Formate/nitrite transporter
JO40_RS07565	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
JO40_RS07565	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
JO40_RS07570	PF00156	Phosphoribosyl transferase domain
JO40_RS07575	PF09335	JO40_RS07575
JO40_RS07580	PF00669	Bacterial flagellin N-terminal helical region
JO40_RS07580	PF00700	Bacterial flagellin C-terminal helical region
JO40_RS07585	PF00460	Flagella basal body rod protein
JO40_RS07585	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
JO40_RS07590	PF00460	Flagella basal body rod protein
JO40_RS07590	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
JO40_RS07595	PF10135	JO40_RS07595
JO40_RS07600	PF01139	tRNA-splicing ligase RtcB
JO40_RS07610	PF05154	JO40_RS07610
JO40_RS07630	PF03083	Sugar efflux transporter for intercellular exchange
JO40_RS07640	PF13649	Methyltransferase domain
JO40_RS07645	PF15428	JO40_RS07645
JO40_RS07650	PF01554	MatE
JO40_RS07655	PF00005	ABC transporter
JO40_RS07655	PF00664	ABC transporter transmembrane region
JO40_RS07665	PF00005	ABC transporter
JO40_RS07665	PF00664	ABC transporter transmembrane region
JO40_RS07670	PF00005	ABC transporter
JO40_RS07670	PF00664	ABC transporter transmembrane region
JO40_RS07675	PF12146	Putative lysophospholipase
JO40_RS07685	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS07690	PF00005	ABC transporter
JO40_RS07690	PF00664	ABC transporter transmembrane region
JO40_RS07695	PF00005	ABC transporter
JO40_RS07695	PF00664	ABC transporter transmembrane region
JO40_RS07700	PF00005	ABC transporter
JO40_RS07705	PF02361	Cobalt transport protein
JO40_RS07710	PF09605	JO40_RS07710
JO40_RS07715	PF08011	JO40_RS07715
JO40_RS07715	PF09820	JO40_RS07715
JO40_RS07735	PF07977	FabA-like domain
JO40_RS07740	PF00188	Cysteine-rich secretory protein family
JO40_RS07745	PF04754	JO40_RS07745
JO40_RS07750	PF01225	Mur ligase family, catalytic domain
JO40_RS07750	PF02875	Mur ligase family, glutamate ligase domain
JO40_RS07750	PF08245	Mur ligase middle domain
JO40_RS07755	PF16536	JO40_RS07755
JO40_RS07755	PF16542	JO40_RS07755
JO40_RS07775	PF01973	JO40_RS07775
JO40_RS07780	PF00005	ABC transporter
JO40_RS07785	PF00005	ABC transporter
JO40_RS07790	PF13650	Aspartyl protease
JO40_RS07795	PF01546	Peptidase family M20/M25/M40
JO40_RS07795	PF07687	Peptidase dimerisation domain
JO40_RS07800	PF07099	JO40_RS07800
JO40_RS07805	PF01297	Periplasmic solute binding protein family
JO40_RS07810	PF13279	Thioesterase-like superfamily
JO40_RS07815	PF01553	Acyltransferase
JO40_RS07825	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
JO40_RS07825	PF03129	Anticodon binding domain
JO40_RS07825	PF04073	Aminoacyl-tRNA editing domain
JO40_RS07835	PF01643	Acyl-ACP thioesterase
JO40_RS07840	PF13407	Periplasmic binding protein domain
JO40_RS07850	PF04536	TLP18
JO40_RS07860	PF13240	JO40_RS07860
JO40_RS07860	PF13421	JO40_RS07860
JO40_RS07865	PF02547	Queuosine biosynthesis protein
JO40_RS07870	PF00023	Ankyrin repeat
JO40_RS07870	PF12796	Ankyrin repeats (3 copies)
JO40_RS07875	PF01871	AMMECR1
JO40_RS07875	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
JO40_RS07880	PF08011	JO40_RS07880
JO40_RS07880	PF09820	JO40_RS07880
JO40_RS07890	PF01202	Shikimate kinase
JO40_RS07895	PF00390	Malic enzyme, N-terminal domain
JO40_RS07895	PF03949	Malic enzyme, NAD binding domain
JO40_RS07900	PF13173	AAA domain
JO40_RS07900	PF13635	JO40_RS07900
JO40_RS07905	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS07910	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS07915	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS07920	PF00005	ABC transporter
JO40_RS07920	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS07925	PF00005	ABC transporter
JO40_RS07925	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS07930	PF00753	Metallo-beta-lactamase superfamily
JO40_RS07935	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS07940	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JO40_RS07940	PF12728	Helix-turn-helix domain
JO40_RS07945	PF00398	Ribosomal RNA adenine dimethylase
JO40_RS07955	PF00849	RNA pseudouridylate synthase
JO40_RS07960	PF00849	RNA pseudouridylate synthase
JO40_RS07975	PF03755	JO40_RS07975
JO40_RS07975	PF08340	JO40_RS07975
JO40_RS07980	PF13189	Cytidylate kinase-like family
JO40_RS07995	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
JO40_RS07995	PF03129	Anticodon binding domain
JO40_RS07995	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
JO40_RS08005	PF14559	Tetratricopeptide repeat
JO40_RS08010	PF16258	JO40_RS08010
JO40_RS08015	PF03065	Glycosyl hydrolase family 57
JO40_RS08015	PF09210	Domain of unknown function (DUF1957)
JO40_RS08025	PF02401	LytB protein
JO40_RS08030	PF13673	Acetyltransferase (GNAT) domain
JO40_RS08040	PF00300	Histidine phosphatase superfamily (branch 1)
JO40_RS08045	PF02654	JO40_RS08045
JO40_RS08065	PF03602	Conserved hypothetical protein 95
JO40_RS08070	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
JO40_RS08075	PF00578	AhpC/TSA family
JO40_RS08080	PF12784	JO40_RS08080
JO40_RS08090	PF04073	Aminoacyl-tRNA editing domain
JO40_RS08095	PF00392	Bacterial regulatory proteins, gntR family
JO40_RS08100	PF02653	JO40_RS08100
JO40_RS08105	PF02653	JO40_RS08105
JO40_RS08110	PF00005	ABC transporter
JO40_RS08110	PF12399	Branched-chain amino acid ATP-binding cassette transporter
JO40_RS08115	PF00005	ABC transporter
JO40_RS08120	PF14196	JO40_RS08120
JO40_RS08125	PF13458	Periplasmic binding protein
JO40_RS08130	PF02733	Dak1 domain
JO40_RS08135	PF02734	DAK2 domain
JO40_RS08140	PF01208	Uroporphyrinogen decarboxylase (URO-D)
JO40_RS08145	PF01032	FecCD transport family
JO40_RS08150	PF01497	Periplasmic binding protein
JO40_RS08155	PF13508	Acetyltransferase (GNAT) domain
JO40_RS08170	PF01509	TruB family pseudouridylate synthase (N terminal domain)
JO40_RS08170	PF16198	JO40_RS08170
JO40_RS08175	PF02033	Ribosome-binding factor A
JO40_RS08180	PF00009	Elongation factor Tu GTP binding domain
JO40_RS08180	PF04760	Translation initiation factor IF-2, N-terminal region
JO40_RS08180	PF11987	Translation-initiation factor 2
JO40_RS08185	PF08529	NusA N-terminal domain
JO40_RS08185	PF13184	NusA-like KH domain
JO40_RS08185	PF13248	JO40_RS08185
JO40_RS08190	PF02576	Uncharacterised BCR, YhbC family COG0779
JO40_RS08195	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
JO40_RS08195	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
JO40_RS08205	PF00375	Sodium:dicarboxylate symporter family
JO40_RS08210	PF00406	Adenylate kinase
JO40_RS08210	PF05191	Adenylate kinase, active site lid
JO40_RS08215	PF01212	Beta-eliminating lyase
JO40_RS08230	PF13581	Histidine kinase-like ATPase domain
JO40_RS08235	PF01740	STAS domain
JO40_RS08245	PF00149	Calcineurin-like phosphoesterase
JO40_RS08250	PF04471	Restriction endonuclease
JO40_RS08250	PF13174	Tetratricopeptide repeat
JO40_RS08250	PF13181	Tetratricopeptide repeat
JO40_RS08250	PF13432	Tetratricopeptide repeat
JO40_RS08255	PF13181	Tetratricopeptide repeat
JO40_RS08275	PF02390	Putative methyltransferase
JO40_RS08280	PF01264	Chorismate synthase
JO40_RS08300	PF00118	TCP-1/cpn60 chaperonin family
JO40_RS08315	PF10672	S-adenosylmethionine-dependent methyltransferase
JO40_RS08320	PF02629	CoA binding domain
JO40_RS08320	PF06971	Putative DNA-binding protein N-terminus
JO40_RS08325	PF02779	Transketolase, pyrimidine binding domain
JO40_RS08325	PF02780	Transketolase, C-terminal domain
JO40_RS08325	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
JO40_RS08330	PF02457	DisA bacterial checkpoint controller nucleotide-binding
JO40_RS08335	PF07949	YbbR-like protein
JO40_RS08340	PF01648	4'-phosphopantetheinyl transferase superfamily
JO40_RS08345	PF03313	JO40_RS08345
JO40_RS08350	PF00905	Penicillin binding protein transpeptidase domain
JO40_RS08350	PF00912	Transglycosylase
JO40_RS08350	PF06832	JO40_RS08350
JO40_RS08355	PF00707	Translation initiation factor IF-3, C-terminal domain
JO40_RS08355	PF05198	Translation initiation factor IF-3, N-terminal domain
JO40_RS08360	PF01632	Ribosomal protein L35
JO40_RS08365	PF00453	Ribosomal protein L20
JO40_RS08375	PF05164	Cell division protein ZapA
JO40_RS08380	PF02639	JO40_RS08380
JO40_RS08390	PF01464	Transglycosylase SLT domain
JO40_RS08390	PF01476	LysM domain
JO40_RS08395	PF00691	OmpA family
JO40_RS08405	PF12146	Putative lysophospholipase
JO40_RS08410	PF02073	Thermophilic metalloprotease (M29)
JO40_RS08415	PF10988	Protein of unknown function (DUF2807)
JO40_RS08420	PF04191	Phospholipid methyltransferase
JO40_RS08430	PF12900	Pyridoxamine 5'-phosphate oxidase
JO40_RS08445	PF12952	JO40_RS08445
JO40_RS08450	PF10047	JO40_RS08450
JO40_RS08455	PF01850	PIN domain
JO40_RS08460	PF00583	Acetyltransferase (GNAT) family
JO40_RS08465	PF00343	Carbohydrate phosphorylase
JO40_RS08470	PF04165	JO40_RS08470
JO40_RS08475	PF00155	Aminotransferase class I and II
JO40_RS08480	PF16481	JO40_RS08480
JO40_RS08490	PF01244	Membrane dipeptidase (Peptidase family M19)
JO40_RS08495	PF00156	Phosphoribosyl transferase domain
JO40_RS08495	PF13537	Glutamine amidotransferase domain
JO40_RS08505	PF01555	DNA methylase
JO40_RS08515	PF01523	Putative modulator of DNA gyrase
JO40_RS08520	PF01523	Putative modulator of DNA gyrase
JO40_RS08525	PF00309	JO40_RS08525
JO40_RS08525	PF04552	Sigma-54, DNA binding domain
JO40_RS08525	PF04963	Sigma-54 factor, core binding domain
JO40_RS08530	PF00753	Metallo-beta-lactamase superfamily
JO40_RS08535	PF04055	Radical SAM superfamily
JO40_RS08540	PF01370	NAD dependent epimerase/dehydratase family
JO40_RS08545	PF02028	BCCT family transporter
JO40_RS08550	PF01633	Choline/ethanolamine kinase
JO40_RS08550	PF12804	MobA-like NTP transferase domain
JO40_RS08555	PF01235	JO40_RS08555
JO40_RS08570	PF01966	HD domain
JO40_RS08575	PF01713	Smr domain
JO40_RS08585	PF00515	Tetratricopeptide repeat
JO40_RS08590	PF00092	von Willebrand factor type A domain
JO40_RS08605	PF01882	JO40_RS08605
JO40_RS08615	PF13432	Tetratricopeptide repeat
JO40_RS08615	PF14559	Tetratricopeptide repeat
JO40_RS08620	PF00571	CBS domain
JO40_RS08620	PF03471	Transporter associated domain
JO40_RS08625	PF02130	Uncharacterized protein family UPF0054
JO40_RS08630	PF01966	HD domain
JO40_RS08630	PF07697	JO40_RS08630
JO40_RS08630	PF07698	JO40_RS08630
JO40_RS08635	PF02562	PhoH-like protein
JO40_RS08640	PF03840	Preprotein translocase SecG subunit
JO40_RS08650	PF00121	Triosephosphate isomerase
JO40_RS08655	PF04101	Glycosyltransferase family 28 C-terminal domain
JO40_RS08655	PF06925	JO40_RS08655
JO40_RS08680	PF13599	Pentapeptide repeats (9 copies)
JO40_RS08690	PF00206	Lyase
JO40_RS08690	PF10415	Fumarase C C-terminus
JO40_RS08695	PF00691	OmpA family
JO40_RS08700	PF12784	JO40_RS08700
JO40_RS08705	PF00270	DEAD/DEAH box helicase
JO40_RS08705	PF13307	Helicase C-terminal domain
JO40_RS08710	PF01553	Acyltransferase
JO40_RS08715	PF07927	YcfA-like protein
JO40_RS08720	PF15919	JO40_RS08720
JO40_RS08735	PF00211	Adenylate and Guanylate cyclase catalytic domain
JO40_RS08735	PF00672	HAMP domain
JO40_RS08765	PF12710	haloacid dehalogenase-like hydrolase
JO40_RS08775	PF02674	JO40_RS08775
JO40_RS08780	PF13177	DNA polymerase III, delta subunit
JO40_RS08790	PF00072	Response regulator receiver domain
JO40_RS08790	PF00158	Sigma-54 interaction domain
JO40_RS08790	PF02954	Bacterial regulatory protein, Fis family
JO40_RS08795	PF01728	FtsJ-like methyltransferase
JO40_RS08805	PF13180	PDZ domain
JO40_RS08805	PF13365	Trypsin-like peptidase domain
JO40_RS08810	PF00999	Sodium/hydrogen exchanger family
JO40_RS08815	PF01895	PhoU domain
JO40_RS08815	PF02690	JO40_RS08815
JO40_RS08835	PF08840	BAAT / Acyl-CoA thioester hydrolase C terminal
JO40_RS08845	PF01381	Helix-turn-helix
JO40_RS08845	PF15919	JO40_RS08845
JO40_RS08850	PF07927	YcfA-like protein
JO40_RS08860	PF00583	Acetyltransferase (GNAT) family
JO40_RS08865	PF00107	Zinc-binding dehydrogenase
JO40_RS08870	PF04055	Radical SAM superfamily
JO40_RS08870	PF13186	Iron-sulfur cluster-binding domain
JO40_RS08880	PF01638	HxlR-like helix-turn-helix
JO40_RS08885	PF01243	Pyridoxamine 5'-phosphate oxidase
JO40_RS08885	PF12838	4Fe-4S dicluster domain
JO40_RS08890	PF00583	Acetyltransferase (GNAT) family
JO40_RS08895	PF00753	Metallo-beta-lactamase superfamily
JO40_RS08895	PF12706	Beta-lactamase superfamily domain
JO40_RS08900	PF08279	HTH domain
JO40_RS08900	PF13280	JO40_RS08900
JO40_RS08910	PF06182	JO40_RS08910
JO40_RS08915	PF00005	ABC transporter
JO40_RS08920	PF06182	JO40_RS08920
JO40_RS08925	PF12833	Helix-turn-helix domain
JO40_RS08930	PF00005	ABC transporter
JO40_RS08930	PF00664	ABC transporter transmembrane region
JO40_RS08945	PF09605	JO40_RS08945
JO40_RS08950	PF02361	Cobalt transport protein
JO40_RS08955	PF00005	ABC transporter
JO40_RS08960	PF13420	Acetyltransferase (GNAT) domain
JO40_RS08975	PF10543	JO40_RS08975
JO40_RS08985	PF09605	JO40_RS08985
JO40_RS08995	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS09000	PF00271	Helicase conserved C-terminal domain
JO40_RS09000	PF02151	UvrB/uvrC motif
JO40_RS09000	PF04851	Type III restriction enzyme, res subunit
JO40_RS09000	PF12344	Ultra-violet resistance protein B
JO40_RS09005	PF01256	Carbohydrate kinase
JO40_RS09005	PF03853	YjeF-related protein N-terminus
JO40_RS09010	PF00773	RNB domain
JO40_RS09020	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
JO40_RS09025	PF05016	Plasmid stabilisation system protein
JO40_RS09030	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
JO40_RS09035	PF06769	Plasmid encoded toxin Txe
JO40_RS09040	PF01467	Cytidylyltransferase
JO40_RS09050	PF15919	JO40_RS09050
JO40_RS09055	PF00005	ABC transporter
JO40_RS09065	PF06912	JO40_RS09065
JO40_RS09070	PF10962	JO40_RS09070
JO40_RS09075	PF01991	ATP synthase (E/31 kDa) subunit
JO40_RS09080	PF01022	Bacterial regulatory protein, arsR family
JO40_RS09085	PF00122	E1-E2 ATPase
JO40_RS09085	PF00702	haloacid dehalogenase-like hydrolase
JO40_RS09090	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS09095	PF00849	RNA pseudouridylate synthase
JO40_RS09095	PF01479	S4 domain
JO40_RS09100	PF02681	JO40_RS09100
JO40_RS09110	PF10531	SLBB domain
JO40_RS09110	PF13375	RnfC Barrel sandwich hybrid domain
JO40_RS09115	PF03116	JO40_RS09115
JO40_RS09135	PF03065	Glycosyl hydrolase family 57
JO40_RS09135	PF09095	Domain of unknown function (DUF1926)
JO40_RS09145	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
JO40_RS09150	PF03961	JO40_RS09150
JO40_RS09155	PF01790	JO40_RS09155
JO40_RS09160	PF02540	NAD synthase
JO40_RS09165	PF09335	JO40_RS09165
JO40_RS09170	PF13173	AAA domain
JO40_RS09170	PF13635	JO40_RS09170
JO40_RS09175	PF00005	ABC transporter
JO40_RS09175	PF12848	ABC transporter
JO40_RS09175	PF16326	JO40_RS09175
JO40_RS09180	PF08239	Bacterial SH3 domain
JO40_RS09185	PF13507	CobB/CobQ-like glutamine amidotransferase domain
JO40_RS09195	PF01966	HD domain
JO40_RS09200	PF04620	JO40_RS09200
JO40_RS09205	PF04620	JO40_RS09205
JO40_RS09220	PF00571	CBS domain
JO40_RS09220	PF00999	Sodium/hydrogen exchanger family
JO40_RS09230	PF08780	Nucleotidyltransferase substrate binding protein like
JO40_RS09235	PF01909	Nucleotidyltransferase domain
JO40_RS09240	PF01467	Cytidylyltransferase
JO40_RS09240	PF13714	Phosphoenolpyruvate phosphomutase
JO40_RS09245	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
JO40_RS09245	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
JO40_RS09250	PF00266	Aminotransferase class-V
JO40_RS09250	PF12804	MobA-like NTP transferase domain
JO40_RS09255	PF01061	JO40_RS09255
JO40_RS09265	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
JO40_RS09270	PF00005	ABC transporter
JO40_RS09270	PF14524	Wzt C-terminal domain
JO40_RS09275	PF04230	JO40_RS09275
JO40_RS09280	PF02485	Core-2/I-Branching enzyme
JO40_RS09285	PF01757	JO40_RS09285
JO40_RS09290	PF13649	Methyltransferase domain
JO40_RS09300	PF08241	Methyltransferase domain
JO40_RS09305	PF02350	UDP-N-acetylglucosamine 2-epimerase
JO40_RS09310	PF00535	Glycosyl transferase family 2
JO40_RS09315	PF01501	Glycosyl transferase family 8
JO40_RS09320	PF00483	Nucleotidyl transferase
JO40_RS09325	PF16363	JO40_RS09325
JO40_RS09330	PF01370	NAD dependent epimerase/dehydratase family
JO40_RS09335	PF01370	NAD dependent epimerase/dehydratase family
JO40_RS09350	PF00535	Glycosyl transferase family 2
JO40_RS09355	PF00535	Glycosyl transferase family 2
JO40_RS09365	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
JO40_RS09365	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
JO40_RS09365	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
JO40_RS09370	PF00535	Glycosyl transferase family 2
JO40_RS09375	PF05523	WxcM-like, C-terminal
JO40_RS09380	PF05523	WxcM-like, C-terminal
JO40_RS09390	PF13489	Methyltransferase domain
JO40_RS09395	PF08780	Nucleotidyltransferase substrate binding protein like
JO40_RS09400	PF01909	Nucleotidyltransferase domain
JO40_RS09405	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
JO40_RS09410	PF01755	JO40_RS09410
JO40_RS09425	PF01755	JO40_RS09425
JO40_RS09435	PF02096	60Kd inner membrane protein
JO40_RS09440	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JO40_RS09465	PF02096	60Kd inner membrane protein
JO40_RS09470	PF04488	Glycosyltransferase sugar-binding region containing DXD motif
JO40_RS09475	PF00534	Glycosyl transferases group 1
JO40_RS09475	PF13439	Glycosyltransferase Family 4
JO40_RS09480	PF01370	NAD dependent epimerase/dehydratase family
JO40_RS09485	PF00483	Nucleotidyl transferase
JO40_RS09490	PF16363	JO40_RS09490
JO40_RS09495	PF03129	Anticodon binding domain
JO40_RS09495	PF13393	Histidyl-tRNA synthetase
JO40_RS09505	PF07521	RNA-metabolising metallo-beta-lactamase
JO40_RS09505	PF10996	Beta-Casp domain
JO40_RS09505	PF16661	JO40_RS09505
JO40_RS09515	PF00005	ABC transporter
JO40_RS09515	PF12848	ABC transporter
JO40_RS09520	PF13419	Haloacid dehalogenase-like hydrolase
JO40_RS09525	PF00595	PDZ domain (Also known as DHR or GLGF)
JO40_RS09525	PF03572	Peptidase family S41
JO40_RS09535	PF03808	JO40_RS09535
JO40_RS09550	PF02517	CAAX protease self-immunity
JO40_RS09570	PF02624	YcaO-like family
JO40_RS09580	PF00675	Insulinase (Peptidase family M16)
JO40_RS09580	PF05193	Peptidase M16 inactive domain
JO40_RS09580	PF08367	Peptidase M16C associated
JO40_RS09585	PF02075	Crossover junction endodeoxyribonuclease RuvC
JO40_RS09590	PF01330	RuvA N terminal domain
JO40_RS09590	PF14520	Helix-hairpin-helix domain
JO40_RS09595	PF04754	JO40_RS09595
JO40_RS09600	PF13349	JO40_RS09600
JO40_RS09605	PF13349	JO40_RS09605
JO40_RS09615	PF08006	JO40_RS09615
JO40_RS09620	PF08006	JO40_RS09620
JO40_RS09620	PF13349	JO40_RS09620
JO40_RS09625	PF03551	Transcriptional regulator PadR-like family
JO40_RS09630	PF04055	Radical SAM superfamily
JO40_RS09630	PF13353	4Fe-4S single cluster domain
JO40_RS09635	PF13597	Anaerobic ribonucleoside-triphosphate reductase
JO40_RS09640	PF04365	Protein of unknown function (DUF497)
JO40_RS09645	PF14384	JO40_RS09645
JO40_RS09650	PF01145	SPFH domain / Band 7 family
JO40_RS09660	PF00005	ABC transporter
JO40_RS09665	PF02687	JO40_RS09665
JO40_RS09670	PF02687	JO40_RS09670
JO40_RS09670	PF12704	MacB-like periplasmic core domain
JO40_RS09675	PF17131	JO40_RS09675
JO40_RS09690	PF01909	Nucleotidyltransferase domain
JO40_RS09695	PF01934	Protein of unknown function DUF86
JO40_RS09720	PF12686	JO40_RS09720
JO40_RS09725	PF05973	JO40_RS09725
JO40_RS09750	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
JO40_RS09755	PF05016	Plasmid stabilisation system protein
JO40_RS09760	PF15631	JO40_RS09760
JO40_RS09770	PF08282	haloacid dehalogenase-like hydrolase
JO40_RS09795	PF01909	Nucleotidyltransferase domain
JO40_RS09800	PF01934	Protein of unknown function DUF86
JO40_RS09805	PF04014	Antidote-toxin recognition MazE
JO40_RS09810	PF02452	PemK-like protein
JO40_RS09820	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
JO40_RS09830	PF01926	50S ribosome-binding GTPase
JO40_RS09830	PF07650	KH domain
JO40_RS09835	PF04060	Putative Fe-S cluster
JO40_RS09835	PF12838	4Fe-4S dicluster domain
JO40_RS09835	PF13187	4Fe-4S dicluster domain
JO40_RS09840	PF00009	Elongation factor Tu GTP binding domain
JO40_RS09840	PF00679	Elongation factor G C-terminus
JO40_RS09840	PF03144	Elongation factor Tu domain 2
JO40_RS09840	PF06421	GTP-binding protein LepA C-terminus
JO40_RS09840	PF14492	Elongation Factor G, domain II
JO40_RS09845	PF12784	JO40_RS09845
JO40_RS09855	PF00535	Glycosyl transferase family 2
JO40_RS09875	PF12784	JO40_RS09875
JO40_RS09880	PF05525	JO40_RS09880
JO40_RS09885	PF04519	JO40_RS09885
JO40_RS09890	PF12895	Anaphase-promoting complex, cyclosome, subunit 3
JO40_RS09890	PF13181	Tetratricopeptide repeat
JO40_RS09895	PF00919	Uncharacterized protein family UPF0004
JO40_RS09895	PF04055	Radical SAM superfamily
JO40_RS09905	PF00892	EamA-like transporter family
JO40_RS09915	PF03602	Conserved hypothetical protein 95
JO40_RS09925	PF00829	Ribosomal prokaryotic L21 protein
JO40_RS09930	PF04327	Protein of unknown function (DUF464)
JO40_RS09935	PF01016	Ribosomal L27 protein
JO40_RS09940	PF01018	GTP1/OBG
JO40_RS09940	PF01926	50S ribosome-binding GTPase
JO40_RS09945	PF01467	Cytidylyltransferase
JO40_RS09945	PF01966	HD domain
JO40_RS09950	PF03816	Cell envelope-related transcriptional attenuator domain
JO40_RS09950	PF13399	LytR cell envelope-related transcriptional attenuator
JO40_RS09955	PF02410	Oligomerisation domain
JO40_RS09960	PF02417	JO40_RS09960
JO40_RS09965	PF02417	JO40_RS09965
JO40_RS09970	PF00226	DnaJ domain
JO40_RS09980	PF03372	Endonuclease/Exonuclease/phosphatase family
JO40_RS09990	PF00037	4Fe-4S binding domain
JO40_RS10000	PF01551	Peptidase family M23
JO40_RS10010	PF00905	Penicillin binding protein transpeptidase domain
JO40_RS10010	PF00912	Transglycosylase
JO40_RS10020	PF00501	AMP-binding enzyme
JO40_RS10040	PF07690	Major Facilitator Superfamily
JO40_RS10045	PF00703	Glycosyl hydrolases family 2
JO40_RS10045	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
JO40_RS10045	PF02837	Glycosyl hydrolases family 2, sugar binding domain
JO40_RS10060	PF02566	OsmC-like protein
JO40_RS10065	PF01743	Poly A polymerase head domain
JO40_RS10065	PF12627	Probable RNA and SrmB- binding site of polymerase A
JO40_RS10075	PF00728	Glycosyl hydrolase family 20, catalytic domain
JO40_RS10085	PF04055	Radical SAM superfamily
JO40_RS10090	PF07505	JO40_RS10090
JO40_RS10095	PF01047	MarR family
JO40_RS10100	PF00117	Glutamine amidotransferase class-I
JO40_RS10100	PF00958	GMP synthase C terminal domain
JO40_RS10100	PF01171	PP-loop family
JO40_RS10110	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JO40_RS10115	PF00162	Phosphoglycerate kinase
JO40_RS10120	PF01520	N-acetylmuramoyl-L-alanine amidase
JO40_RS10120	PF07833	Copper amine oxidase N-terminal domain
JO40_RS10130	PF04620	JO40_RS10130
JO40_RS10135	PF04607	Region found in RelA / SpoT proteins
JO40_RS10135	PF13432	Tetratricopeptide repeat
JO40_RS10140	PF01649	Ribosomal protein S20
JO40_RS10145	PF00216	Bacterial DNA-binding protein
JO40_RS10155	PF04519	JO40_RS10155
JO40_RS10160	PF02464	Competence-damaged protein
JO40_RS10190	PF00300	Histidine phosphatase superfamily (branch 1)
JO40_RS10195	PF07171	MlrC C-terminus
JO40_RS10195	PF07364	Protein of unknown function (DUF1485)
JO40_RS10200	PF01869	BadF/BadG/BcrA/BcrD ATPase family
JO40_RS10200	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component
JO40_RS10200	PF09989	JO40_RS10200
JO40_RS10220	PF00005	ABC transporter
JO40_RS10230	PF13181	Tetratricopeptide repeat
JO40_RS10230	PF14559	Tetratricopeptide repeat
JO40_RS10235	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
JO40_RS10240	PF00156	Phosphoribosyl transferase domain
JO40_RS10245	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
JO40_RS10245	PF02874	ATP synthase alpha/beta family, beta-barrel domain
JO40_RS10245	PF16886	JO40_RS10245
JO40_RS10250	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
JO40_RS10250	PF02874	ATP synthase alpha/beta family, beta-barrel domain
JO40_RS10255	PF01813	ATP synthase subunit D
JO40_RS10260	PF01496	V-type ATPase 116kDa subunit family
JO40_RS10265	PF00137	ATP synthase subunit C
JO40_RS10270	PF01250	Ribosomal protein S6
JO40_RS10275	PF00436	Single-strand binding protein family
JO40_RS10280	PF01084	Ribosomal protein S18
JO40_RS10285	PF01281	Ribosomal protein L9, N-terminal domain
JO40_RS10285	PF03948	Ribosomal protein L9, C-terminal domain
JO40_RS10295	PF06689	ClpX C4-type zinc finger
JO40_RS10295	PF07724	AAA domain (Cdc48 subfamily)
JO40_RS10295	PF10431	C-terminal, D2-small domain, of ClpB protein
JO40_RS10300	PF00574	Clp protease
JO40_RS10305	PF05697	Bacterial trigger factor protein (TF)
JO40_RS10305	PF05698	Bacterial trigger factor protein (TF) C-terminus
JO40_RS10320	PF01047	MarR family
JO40_RS10325	PF00155	Aminotransferase class I and II
JO40_RS10330	PF13520	Amino acid permease
JO40_RS10335	PF01008	Initiation factor 2 subunit family
JO40_RS10350	PF00691	OmpA family
JO40_RS10355	PF00772	DnaB-like helicase N terminal domain
JO40_RS10355	PF03796	DnaB-like helicase C terminal domain
JO40_RS10360	PF09912	JO40_RS10360
JO40_RS10365	PF01411	tRNA synthetases class II (A)
JO40_RS10365	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
JO40_RS10375	PF01029	NusB family
JO40_RS10385	PF09413	Domain of unknown function (DUF2007)
JO40_RS10390	PF00270	DEAD/DEAH box helicase
JO40_RS10390	PF00271	Helicase conserved C-terminal domain
JO40_RS10390	PF04408	Helicase associated domain (HA2)
JO40_RS10390	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
JO40_RS10395	PF08011	JO40_RS10395
JO40_RS10395	PF09820	JO40_RS10395
JO40_RS10405	PF00456	Transketolase, thiamine diphosphate binding domain
JO40_RS10405	PF02779	Transketolase, pyrimidine binding domain
JO40_RS10410	PF16363	JO40_RS10410
JO40_RS10415	PF01880	Desulfoferrodoxin
JO40_RS10455	PF02463	RecF/RecN/SMC N terminal domain
JO40_RS10465	PF13023	HD domain
JO40_RS10470	PF00027	Cyclic nucleotide-binding domain
JO40_RS10475	PF01476	LysM domain
JO40_RS10475	PF01551	Peptidase family M23
JO40_RS10480	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
JO40_RS10485	PF02603	HPr Serine kinase N terminus
JO40_RS10485	PF07475	HPr Serine kinase C-terminal domain
JO40_RS10490	PF00381	PTS HPr component phosphorylation site
JO40_RS10500	PF01523	Putative modulator of DNA gyrase
JO40_RS10510	PF04246	JO40_RS10510
JO40_RS10515	PF13277	YmdB-like protein
JO40_RS10520	PF13414	TPR repeat
JO40_RS10520	PF13432	Tetratricopeptide repeat
JO40_RS10525	PF00348	Polyprenyl synthetase
JO40_RS10550	PF03692	JO40_RS10550
JO40_RS10555	PF12706	Beta-lactamase superfamily domain
JO40_RS10565	PF02618	YceG-like family
JO40_RS10570	PF00534	Glycosyl transferases group 1
JO40_RS10570	PF13439	Glycosyltransferase Family 4
JO40_RS10575	PF00156	Phosphoribosyl transferase domain
JO40_RS10580	PF13290	JO40_RS10580
JO40_RS10585	PF01351	Ribonuclease HII
JO40_RS10590	PF03812	JO40_RS10590
JO40_RS10595	PF07005	Protein of unknown function, DUF1537
JO40_RS10595	PF17042	JO40_RS10595
JO40_RS10600	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
JO40_RS10605	PF08666	SAF domain
JO40_RS10610	PF04295	JO40_RS10610
JO40_RS10615	PF00455	JO40_RS10615
JO40_RS10615	PF08220	DeoR-like helix-turn-helix domain
JO40_RS10620	PF01706	FliG C-terminal domain
JO40_RS10620	PF14841	FliG middle domain
JO40_RS10620	PF14842	FliG N-terminal domain
JO40_RS10625	PF13432	Tetratricopeptide repeat
JO40_RS10640	PF07456	JO40_RS10640
JO40_RS10645	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
JO40_RS10660	PF13186	Iron-sulfur cluster-binding domain
JO40_RS10670	PF02348	Cytidylyltransferase
JO40_RS10670	PF13489	Methyltransferase domain
JO40_RS10675	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
JO40_RS10675	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
JO40_RS10680	PF00465	Iron-containing alcohol dehydrogenase
JO40_RS10685	PF05491	Holliday junction DNA helicase ruvB C-terminus
JO40_RS10685	PF05496	Holliday junction DNA helicase ruvB N-terminus
JO40_RS10690	PF00392	Bacterial regulatory proteins, gntR family
JO40_RS10695	PF01043	SecA preprotein cross-linking domain
JO40_RS10695	PF02810	SEC-C motif
JO40_RS10695	PF07516	SecA Wing and Scaffold domain
JO40_RS10695	PF07517	SecA DEAD-like domain
JO40_RS10700	PF00551	Formyl transferase
JO40_RS10705	PF01808	AICARFT/IMPCHase bienzyme
JO40_RS10705	PF02142	MGS-like domain
JO40_RS10710	PF02575	YbaB/EbfC DNA-binding family
JO40_RS10715	PF02132	RecR protein
JO40_RS10715	PF13662	Toprim domain
JO40_RS10720	PF00365	Phosphofructokinase
JO40_RS10725	PF00919	Uncharacterized protein family UPF0004
JO40_RS10725	PF01938	TRAM domain
JO40_RS10725	PF04055	Radical SAM superfamily
JO40_RS10740	PF12850	Calcineurin-like phosphoesterase superfamily domain
JO40_RS10760	PF00534	Glycosyl transferases group 1
JO40_RS10760	PF08323	Starch synthase catalytic domain
JO40_RS10770	PF04402	Protein of unknown function (DUF541)
JO40_RS10785	PF00152	tRNA synthetases class II (D, K and N)
JO40_RS10785	PF01336	OB-fold nucleic acid binding domain
JO40_RS10785	PF02938	GAD domain
JO40_RS10790	PF00579	tRNA synthetases class I (W and Y)
JO40_RS10795	PF01584	CheW-like domain
JO40_RS10800	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
JO40_RS10805	PF01513	ATP-NAD kinase
JO40_RS10810	PF00005	ABC transporter
JO40_RS10810	PF12848	ABC transporter
JO40_RS10815	PF02256	Iron hydrogenase small subunit
JO40_RS10815	PF02906	Iron only hydrogenase large subunit, C-terminal domain
JO40_RS10815	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
JO40_RS10815	PF12838	4Fe-4S dicluster domain
JO40_RS10815	PF13510	2Fe-2S iron-sulfur cluster binding domain
JO40_RS10820	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS10820	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
JO40_RS10820	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JO40_RS10825	PF01888	CbiD
JO40_RS10830	PF00293	NUDIX domain
JO40_RS10835	PF01554	MatE
JO40_RS10840	PF04851	Type III restriction enzyme, res subunit
JO40_RS10840	PF13307	Helicase C-terminal domain
JO40_RS10845	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS10850	PF13649	Methyltransferase domain
JO40_RS10865	PF14681	Uracil phosphoribosyltransferase
JO40_RS10885	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
JO40_RS10885	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
JO40_RS10890	PF05066	HB1, ASXL, restriction endonuclease HTH domain
JO40_RS10895	PF00266	Aminotransferase class-V
JO40_RS10900	PF02347	Glycine cleavage system P-protein
JO40_RS10905	PF01597	Glycine cleavage H-protein
JO40_RS10910	PF01571	Aminomethyltransferase folate-binding domain
JO40_RS10910	PF08669	Glycine cleavage T-protein C-terminal barrel domain
JO40_RS10915	PF10882	JO40_RS10915
JO40_RS10920	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
JO40_RS10920	PF07992	Pyridine nucleotide-disulphide oxidoreductase
JO40_RS10925	PF01555	DNA methylase
JO40_RS10930	PF04851	Type III restriction enzyme, res subunit
JO40_RS10940	PF04223	Citrate lyase, alpha subunit (CitF)
JO40_RS10945	PF03328	HpcH/HpaI aldolase/citrate lyase family
JO40_RS10950	PF06857	JO40_RS10950
JO40_RS10955	PF00476	DNA polymerase family A
JO40_RS10955	PF01367	5'-3' exonuclease, C-terminal SAM fold
JO40_RS10955	PF01612	3'-5' exonuclease
JO40_RS10955	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
JO40_RS10960	PF01121	Dephospho-CoA kinase
JO40_RS10965	PF05036	Sporulation related domain
JO40_RS10970	PF01487	Type I 3-dehydroquinase
JO40_RS10970	PF01488	Shikimate / quinate 5-dehydrogenase
JO40_RS10970	PF08501	Shikimate dehydrogenase substrate binding domain
JO40_RS10975	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
JO40_RS10985	PF03793	PASTA domain
JO40_RS10990	PF00551	Formyl transferase
JO40_RS10990	PF02911	Formyl transferase, C-terminal domain
JO40_RS10995	PF01327	Polypeptide deformylase
JO40_RS11005	PF00005	ABC transporter
JO40_RS11010	PF02632	BioY family
JO40_RS11015	PF01814	Hemerythrin HHE cation binding domain
JO40_RS11045	PF11848	JO40_RS11045
JO40_RS11060	PF08867	JO40_RS11060
JO40_RS11080	PF00092	von Willebrand factor type A domain
JO40_RS11085	PF00069	Protein kinase domain
JO40_RS11100	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
JO40_RS11100	PF03802	JO40_RS11100
JO40_RS11105	PF08218	Citrate lyase ligase C-terminal domain
JO40_RS11110	PF05683	Fumarase C-terminus
JO40_RS11115	PF05681	JO40_RS11115
JO40_RS11120	PF10016	JO40_RS11120
JO40_RS11125	PF02687	JO40_RS11125
JO40_RS11125	PF12704	MacB-like periplasmic core domain
JO40_RS11130	PF04205	FMN-binding domain
JO40_RS11135	PF00005	ABC transporter
JO40_RS11140	PF02687	JO40_RS11140
JO40_RS11140	PF12704	MacB-like periplasmic core domain
JO40_RS11145	PF02687	JO40_RS11145
JO40_RS11145	PF12704	MacB-like periplasmic core domain
JO40_RS11160	PF10634	Fe2+ transport protein
JO40_RS11165	PF03239	JO40_RS11165
JO40_RS11170	PF00005	ABC transporter
JO40_RS11170	PF00664	ABC transporter transmembrane region
JO40_RS11175	PF00005	ABC transporter
JO40_RS11180	PF14387	JO40_RS11180
JO40_RS11185	PF03315	Serine dehydratase beta chain
JO40_RS11190	PF03313	JO40_RS11190
JO40_RS11195	PF01957	NfeD-like C-terminal, partner-binding
JO40_RS11200	PF01197	Ribosomal protein L31
JO40_RS11205	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
JO40_RS11205	PF07497	Rho termination factor, RNA-binding domain
JO40_RS11205	PF07498	Rho termination factor, N-terminal domain
JO40_RS11215	PF07736	Chorismate mutase type I
JO40_RS11220	PF00391	PEP-utilising enzyme, mobile domain
JO40_RS11220	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
JO40_RS11220	PF02896	PEP-utilising enzyme, TIM barrel domain
JO40_RS11230	PF00206	Lyase
JO40_RS11230	PF08328	Adenylosuccinate lyase C-terminal
JO40_RS11250	PF02463	RecF/RecN/SMC N terminal domain
JO40_RS11260	PF00072	Response regulator receiver domain
JO40_RS11265	PF13690	Chemotaxis phosphatase CheX
JO40_RS11270	PF01584	CheW-like domain
JO40_RS11270	PF01739	CheR methyltransferase, SAM binding domain
JO40_RS11275	PF01584	CheW-like domain
JO40_RS11275	PF01627	Hpt domain
JO40_RS11275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
JO40_RS11275	PF02895	Signal transducing histidine kinase, homodimeric domain
JO40_RS11275	PF07194	P2 response regulator binding domain
JO40_RS11290	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
JO40_RS11290	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
JO40_RS11295	PF01709	Transcriptional regulator
JO40_RS11300	PF13601	Winged helix DNA-binding domain
JO40_RS11320	PF00557	Metallopeptidase family M24
JO40_RS11320	PF01321	Creatinase/Prolidase N-terminal domain
JO40_RS11320	PF16188	JO40_RS11320
JO40_RS11320	PF16189	JO40_RS11320
JO40_RS11335	PF01368	DHH family
JO40_RS11335	PF02272	DHHA1 domain
JO40_RS11345	PF00669	Bacterial flagellin N-terminal helical region
JO40_RS11345	PF00700	Bacterial flagellin C-terminal helical region
JO40_RS11350	PF00669	Bacterial flagellin N-terminal helical region
JO40_RS11350	PF00700	Bacterial flagellin C-terminal helical region
JO40_RS11355	PF03646	FlaG protein
JO40_RS11360	PF02465	JO40_RS11360
JO40_RS11360	PF07195	JO40_RS11360
JO40_RS11375	PF02367	Uncharacterised P-loop hydrolase UPF0079
JO40_RS11380	PF00814	Glycoprotease family
JO40_RS11385	PF13426	PAS domain
JO40_RS11385	PF13487	HD domain
JO40_RS11390	PF04055	Radical SAM superfamily
JO40_RS11390	PF06969	HemN C-terminal domain
JO40_RS11415	PF03062	JO40_RS11415
JO40_RS11430	PF01145	SPFH domain / Band 7 family
JO40_RS11435	PF03477	ATP cone domain
JO40_RS11435	PF13597	Anaerobic ribonucleoside-triphosphate reductase
JO40_RS11440	PF03477	ATP cone domain
JO40_RS11445	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS11465	PF04773	FecR protein
JO40_RS11470	PF01205	Uncharacterized protein family UPF0029
JO40_RS11470	PF09186	Domain of unknown function (DUF1949)
JO40_RS11475	PF03772	JO40_RS11475
JO40_RS11485	PF07238	PilZ domain
JO40_RS11490	PF02517	CAAX protease self-immunity
JO40_RS11500	PF00905	Penicillin binding protein transpeptidase domain
JO40_RS11500	PF03717	Penicillin-binding Protein dimerisation domain
JO40_RS11500	PF03793	PASTA domain
JO40_RS11505	PF00717	Peptidase S24-like
JO40_RS11510	PF05872	JO40_RS11510
JO40_RS11515	PF01555	DNA methylase
JO40_RS11520	PF09499	JO40_RS11520
JO40_RS11525	PF01300	Telomere recombination
JO40_RS11530	PF04977	Septum formation initiator
JO40_RS11545	PF01973	JO40_RS11545
JO40_RS11555	PF00990	GGDEF domain
JO40_RS11560	PF05016	Plasmid stabilisation system protein
JO40_RS11565	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
JO40_RS11570	PF13347	MFS/sugar transport protein
JO40_RS11575	PF02065	Melibiase
JO40_RS11575	PF16875	JO40_RS11575
JO40_RS11590	PF03193	Protein of unknown function, DUF258
JO40_RS11595	PF01177	Asp/Glu/Hydantoin racemase
JO40_RS11600	PF01715	IPP transferase
JO40_RS11615	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS11625	PF05728	Uncharacterised protein family (UPF0227)
JO40_RS11630	PF00133	tRNA synthetases class I (I, L, M and V)
JO40_RS11630	PF08264	Anticodon-binding domain of tRNA
JO40_RS11630	PF10458	Valyl tRNA synthetase tRNA binding arm
JO40_RS11635	PF00860	Permease family
JO40_RS11645	PF01263	Aldose 1-epimerase
JO40_RS11650	PF12974	ABC transporter, phosphonate, periplasmic substrate-binding protein
JO40_RS11660	PF01098	JO40_RS11660
JO40_RS11665	PF00905	Penicillin binding protein transpeptidase domain
JO40_RS11665	PF03717	Penicillin-binding Protein dimerisation domain
JO40_RS11675	PF04085	rod shape-determining protein MreC
JO40_RS11680	PF06723	MreB/Mbl protein
JO40_RS11685	PF13414	TPR repeat
JO40_RS11690	PF02591	Putative zinc ribbon domain
JO40_RS11695	PF00140	Sigma-70 factor, region 1
JO40_RS11695	PF03979	Sigma-70 factor, region 1
JO40_RS11695	PF04539	Sigma-70 region 3
JO40_RS11695	PF04542	Sigma-70 region 2
JO40_RS11695	PF04545	Sigma-70, region 4
JO40_RS11700	PF01807	CHC2 zinc finger
JO40_RS11700	PF08275	DNA primase catalytic core, N-terminal domain
JO40_RS11700	PF10410	DnaB-helicase binding domain of primase
JO40_RS11700	PF13155	Toprim-like
JO40_RS11705	PF01078	Magnesium chelatase, subunit ChlI
JO40_RS11705	PF13335	JO40_RS11705
JO40_RS11705	PF13541	Subunit ChlI of Mg-chelatase
JO40_RS11710	PF13274	JO40_RS11710
JO40_RS11720	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
JO40_RS11720	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
JO40_RS11720	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
JO40_RS11720	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
JO40_RS11725	PF00929	Exonuclease
JO40_RS11730	PF00005	ABC transporter
JO40_RS11735	PF01432	Peptidase family M3
JO40_RS11735	PF08439	Oligopeptidase F
JO40_RS11745	PF00176	SNF2 family N-terminal domain
JO40_RS11745	PF00271	Helicase conserved C-terminal domain
JO40_RS11750	PF13310	JO40_RS11750
JO40_RS11755	PF07669	Eco57I restriction-modification methylase
JO40_RS11755	PF12950	TaqI-like C-terminal specificity domain
JO40_RS11765	PF00239	Resolvase, N terminal domain
JO40_RS11770	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS11775	PF03176	MMPL family
JO40_RS11780	PF00005	ABC transporter
JO40_RS11780	PF00664	ABC transporter transmembrane region
JO40_RS11785	PF00583	Acetyltransferase (GNAT) family
JO40_RS11790	PF00005	ABC transporter
JO40_RS11790	PF00664	ABC transporter transmembrane region
JO40_RS11825	PF00892	EamA-like transporter family
JO40_RS11870	PF00515	Tetratricopeptide repeat
JO40_RS11870	PF13181	Tetratricopeptide repeat
JO40_RS11870	PF13414	TPR repeat
JO40_RS11870	PF13432	Tetratricopeptide repeat
JO40_RS11990	PF13181	Tetratricopeptide repeat
JO40_RS11990	PF13414	TPR repeat
JO40_RS12095	PF03534	Salmonella virulence plasmid 65kDa B protein
JO40_RS12095	PF12256	Insecticide toxin TcdB middle/N-terminal region
JO40_RS12130	PF00691	OmpA family
JO40_RS12130	PF13750	JO40_RS12130
JO40_RS12130	PF13860	FlgD Ig-like domain
JO40_RS12135	PF01026	TatD related DNase
JO40_RS12145	PF03330	Rare lipoprotein A (RlpA)-like double-psi beta-barrel
JO40_RS12145	PF05036	Sporulation related domain
JO40_RS12150	PF01278	Omptin family
JO40_RS12155	PF00534	Glycosyl transferases group 1
JO40_RS12155	PF13439	Glycosyltransferase Family 4
JO40_RS12160	PF00483	Nucleotidyl transferase
JO40_RS12165	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS12165	PF02151	UvrB/uvrC motif
JO40_RS12165	PF02861	Clp amino terminal domain
JO40_RS12165	PF07724	AAA domain (Cdc48 subfamily)
JO40_RS12165	PF10431	C-terminal, D2-small domain, of ClpB protein
JO40_RS12170	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
JO40_RS12175	PF02151	UvrB/uvrC motif
JO40_RS12180	PF02687	JO40_RS12180
JO40_RS12180	PF12704	MacB-like periplasmic core domain
JO40_RS12185	PF00005	ABC transporter
JO40_RS12190	PF02687	JO40_RS12190
JO40_RS12190	PF12704	MacB-like periplasmic core domain
JO40_RS12200	PF00448	SRP54-type protein, GTPase domain
JO40_RS12200	PF02881	SRP54-type protein, helical bundle domain
JO40_RS12205	PF08308	JO40_RS12205
JO40_RS12215	PF00472	RF-1 domain
JO40_RS12215	PF03462	PCRF domain
JO40_RS12225	PF08713	DNA alkylation repair enzyme
JO40_RS12230	PF15919	JO40_RS12230
JO40_RS12250	PF00586	AIR synthase related protein, N-terminal domain
JO40_RS12250	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
JO40_RS12250	PF02769	AIR synthase related protein, C-terminal domain
JO40_RS12255	PF04260	Protein of unknown function (DUF436)
JO40_RS12265	PF08011	JO40_RS12265
JO40_RS12265	PF09820	JO40_RS12265
JO40_RS12270	PF02906	Iron only hydrogenase large subunit, C-terminal domain
JO40_RS12270	PF13237	4Fe-4S dicluster domain
JO40_RS12285	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
JO40_RS12290	PF00005	ABC transporter
JO40_RS12290	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS12295	PF00005	ABC transporter
JO40_RS12295	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
JO40_RS12300	PF02566	OsmC-like protein
JO40_RS12310	PF06044	Dam-replacing family
JO40_RS12315	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
JO40_RS12315	PF02843	Phosphoribosylglycinamide synthetase, C domain
JO40_RS12315	PF02844	Phosphoribosylglycinamide synthetase, N domain
JO40_RS12320	PF00586	AIR synthase related protein, N-terminal domain
JO40_RS12320	PF02769	AIR synthase related protein, C-terminal domain
JO40_RS12325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
JO40_RS12325	PF00672	HAMP domain
JO40_RS12325	PF02743	Cache domain
JO40_RS12330	PF04551	GcpE protein
JO40_RS12340	PF13365	Trypsin-like peptidase domain
JO40_RS12350	PF01171	PP-loop family
JO40_RS12355	PF01386	Ribosomal L25p family
JO40_RS12355	PF14693	Ribosomal protein TL5, C-terminal domain
JO40_RS12365	PF04026	SpoVG
JO40_RS12370	PF00288	GHMP kinases N terminal domain
JO40_RS12370	PF08544	GHMP kinases C terminal
JO40_RS12375	PF03484	tRNA synthetase B5 domain
JO40_RS12380	PF01261	Xylose isomerase-like TIM barrel
JO40_RS12415	PF05016	Plasmid stabilisation system protein
JO40_RS12430	PF09479	Listeria-Bacteroides repeat domain (List_Bact_rpt)
JO40_RS12460	PF00163	Ribosomal protein S4/S9 N-terminal domain
JO40_RS12460	PF01479	S4 domain
JO40_RS12490	PF02653	JO40_RS12490
JO40_RS12495	PF02653	JO40_RS12495
JO40_RS12500	PF00005	ABC transporter
JO40_RS12505	PF02608	Basic membrane protein
JO40_RS12510	PF05343	M42 glutamyl aminopeptidase
JO40_RS12515	PF01820	D-ala D-ala ligase N-terminus
JO40_RS12515	PF07478	D-ala D-ala ligase C-terminus
JO40_RS12525	PF02446	4-alpha-glucanotransferase
JO40_RS12530	PF00574	Clp protease
JO40_RS12535	PF03186	JO40_RS12535
JO40_RS12545	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
JO40_RS12545	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
JO40_RS12555	PF01424	R3H domain
JO40_RS12555	PF13083	KH domain
JO40_RS12555	PF14804	Jag N-terminus
JO40_RS12560	PF02096	60Kd inner membrane protein
JO40_RS12560	PF14849	YidC periplasmic domain
JO40_RS12565	PF01809	JO40_RS12565
JO40_RS12570	PF00825	Ribonuclease P
JO40_RS12575	PF00468	Ribosomal protein L34
JO40_RS12580	PF10282	Lactonase, 7-bladed beta-propeller
JO40_RS12585	PF01297	Periplasmic solute binding protein family
JO40_RS12590	PF00005	ABC transporter
JO40_RS12595	PF00950	JO40_RS12595
JO40_RS12605	PF01325	Iron dependent repressor, N-terminal DNA binding domain
JO40_RS12605	PF02742	Iron dependent repressor, metal binding and dimerisation domain
JO40_RS12610	PF00933	Glycosyl hydrolase family 3 N terminal domain
JO40_RS12625	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
JO40_RS12625	PF02874	ATP synthase alpha/beta family, beta-barrel domain
JO40_RS12630	PF02108	JO40_RS12630
JO40_RS12635	PF01706	FliG C-terminal domain
JO40_RS12635	PF14841	FliG middle domain
JO40_RS12635	PF14842	FliG N-terminal domain
JO40_RS12640	PF01514	Secretory protein of YscJ/FliF family
JO40_RS12640	PF08345	JO40_RS12640
JO40_RS12645	PF02049	JO40_RS12645
JO40_RS12650	PF00460	Flagella basal body rod protein
JO40_RS12650	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
JO40_RS12655	PF00460	Flagella basal body rod protein
JO40_RS12660	PF00004	ATPase family associated with various cellular activities (AAA)
JO40_RS12660	PF07724	AAA domain (Cdc48 subfamily)
JO40_RS12665	PF00227	Proteasome subunit
JO40_RS12670	PF00589	Phage integrase family
JO40_RS12670	PF02899	Phage integrase, N-terminal SAM-like domain
JO40_RS12675	PF01131	DNA topoisomerase
JO40_RS12675	PF01396	JO40_RS12675
JO40_RS12675	PF01751	Toprim domain
JO40_RS12680	PF02481	DNA recombination-mediator protein A
JO40_RS12685	PF07719	Tetratricopeptide repeat
JO40_RS12685	PF13174	Tetratricopeptide repeat
JO40_RS12690	PF00589	Phage integrase family
JO40_RS12690	PF02899	Phage integrase, N-terminal SAM-like domain
JO40_RS12695	PF00091	Tubulin/FtsZ family, GTPase domain
JO40_RS12695	PF12327	FtsZ family, C-terminal domain
JO40_RS12700	PF02491	SHS2 domain inserted in FTSA
JO40_RS12700	PF14450	Cell division protein FtsA
JO40_RS12705	PF08478	POTRA domain, FtsQ-type
JO40_RS12710	PF01098	JO40_RS12710
JO40_RS12715	PF01225	Mur ligase family, catalytic domain
JO40_RS12715	PF02875	Mur ligase family, glutamate ligase domain
JO40_RS12715	PF08245	Mur ligase middle domain
JO40_RS12720	PF04999	JO40_RS12720
JO40_RS12725	PF01795	MraW methylase family
JO40_RS12730	PF02381	MraZ protein
JO40_RS12735	PF00326	Prolyl oligopeptidase family
JO40_RS12735	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
JO40_RS12770	PF02233	NAD(P) transhydrogenase beta subunit
JO40_RS12790	PF01609	Transposase DDE domain
JO40_RS12795	PF01609	Transposase DDE domain
JO40_RS12805	PF00005	ABC transporter
JO40_RS12810	PF01609	Transposase DDE domain
JO40_RS12815	PF01609	Transposase DDE domain
JO40_RS12820	PF00528	Binding-protein-dependent transport system inner membrane component
JO40_RS12820	PF12911	JO40_RS12820
JO40_RS12845	PF03412	Peptidase C39 family
JO40_RS12850	PF00005	ABC transporter
JO40_RS12850	PF00664	ABC transporter transmembrane region
JO40_RS12855	PF07728	AAA domain (dynein-related subfamily)
JO40_RS12860	PF00440	Bacterial regulatory proteins, tetR family
JO40_RS12870	PF01420	Type I restriction modification DNA specificity domain
JO40_RS12875	PF13306	Leucine rich repeats (6 copies)
JO40_RS12880	PF02368	Bacterial Ig-like domain (group 2)
JO40_RS12890	PF13575	JO40_RS12890
JO40_RS12910	PF01609	Transposase DDE domain
JO40_RS12915	PF01609	Transposase DDE domain
JO40_RS12920	PF08238	Sel1 repeat
JO40_RS12920	PF13306	Leucine rich repeats (6 copies)
JO40_RS12940	PF14891	Effector protein