locus-tag class description DYE50_RS00010 PF00005 ABC transporter DYE50_RS00015 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS00025 PF00543 Nitrogen regulatory protein P-II DYE50_RS00045 PF01425 Amidase DYE50_RS00060 PF00293 NUDIX domain DYE50_RS00070 PF00404 Dockerin type I domain DYE50_RS00070 PF00756 Putative esterase DYE50_RS00070 PF03422 Carbohydrate binding module (family 6) DYE50_RS00070 PF00331 Glycosyl hydrolase family 10 DYE50_RS00075 PF03484 tRNA synthetase B5 domain DYE50_RS00075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYE50_RS00080 PF01297 Zinc-uptake complex component A periplasmic DYE50_RS00080 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYE50_RS00085 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_RS00085 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_RS00095 PF01070 FMN-dependent dehydrogenase DYE50_RS00105 PF04205 FMN-binding domain DYE50_RS00105 PF12801 4Fe-4S binding domain DYE50_RS00115 PF08534 Redoxin DYE50_RS00135 PF02233 NAD(P) transhydrogenase beta subunit DYE50_RS00140 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DYE50_RS00145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYE50_RS00145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYE50_RS00150 PF02614 Glucuronate isomerase DYE50_RS00155 PF00186 Dihydrofolate reductase DYE50_RS00175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DYE50_RS00190 PF14849 YidC periplasmic domain DYE50_RS00190 PF02096 60Kd inner membrane protein DYE50_RS00195 PF01809 Putative membrane protein insertion efficiency factor DYE50_RS00200 PF00825 Ribonuclease P DYE50_RS00205 PF00468 Ribosomal protein L34 DYE50_RS00220 PF02463 RecF/RecN/SMC N terminal domain DYE50_RS00225 PF02768 DNA polymerase III beta subunit, C-terminal domain DYE50_RS00225 PF02767 DNA polymerase III beta subunit, central domain DYE50_RS00225 PF00712 DNA polymerase III beta subunit, N-terminal domain DYE50_RS00230 PF11638 DnaA N-terminal domain DYE50_RS00230 PF08299 Bacterial dnaA protein helix-turn-helix DYE50_RS00230 PF00308 Bacterial dnaA protein DYE50_RS00265 PF00204 DNA gyrase B DYE50_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS00265 PF01751 Toprim domain DYE50_RS00265 PF00986 DNA gyrase B subunit, carboxyl terminus DYE50_RS00270 PF00521 DNA gyrase/topoisomerase IV, subunit A DYE50_RS00270 PF03989 DNA gyrase C-terminal domain, beta-propeller DYE50_RS00275 PF00155 Aminotransferase class I and II DYE50_RS00275 PF00392 Bacterial regulatory proteins, gntR family DYE50_RS00280 PF01680 SOR/SNZ family DYE50_RS00285 PF01174 SNO glutamine amidotransferase family DYE50_RS00290 PF12833 Helix-turn-helix domain DYE50_RS00295 PF01554 MatE DYE50_RS00300 PF00069 Protein kinase domain DYE50_RS00305 PF12833 Helix-turn-helix domain DYE50_RS00310 PF00465 Iron-containing alcohol dehydrogenase DYE50_RS00320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYE50_RS00320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYE50_RS00325 PF00563 EAL domain DYE50_RS00325 PF00360 Phytochrome region DYE50_RS00325 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS00325 PF01590 GAF domain DYE50_RS00340 PF00583 Acetyltransferase (GNAT) family DYE50_RS00355 PF00696 Amino acid kinase family DYE50_RS00355 PF00583 Acetyltransferase (GNAT) family DYE50_RS00360 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYE50_RS00365 PF02677 Epoxyqueuosine reductase QueH DYE50_RS00385 PF00403 Heavy-metal-associated domain DYE50_RS00390 PF01022 Bacterial regulatory protein, arsR family DYE50_RS00435 PF12848 ABC transporter DYE50_RS00435 PF16326 ABC transporter C-terminal domain DYE50_RS00435 PF00005 ABC transporter DYE50_RS00440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_RS00440 PF00128 Alpha amylase, catalytic domain DYE50_RS00445 PF00343 Carbohydrate phosphorylase DYE50_RS00450 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS00450 PF05230 MASE2 domain DYE50_RS00455 PF00474 Sodium:solute symporter family DYE50_RS00460 PF13472 GDSL-like Lipase/Acylhydrolase family DYE50_RS00465 PF00709 Adenylosuccinate synthetase DYE50_RS00485 PF00270 DEAD/DEAH box helicase DYE50_RS00485 PF04408 Helicase associated domain (HA2) DYE50_RS00485 PF00271 Helicase conserved C-terminal domain DYE50_RS00485 PF08482 ATP-dependent helicase C-terminal DYE50_RS00490 PF02558 Ketopantoate reductase PanE/ApbA DYE50_RS00490 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYE50_RS00520 PF16868 NMT1-like family DYE50_RS00530 PF00183 Hsp90 protein DYE50_RS00555 PF00085 Thioredoxin DYE50_RS00565 PF02540 NAD synthase DYE50_RS00570 PF03881 Fructosamine kinase DYE50_RS00575 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS00575 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS00575 PF00563 EAL domain DYE50_RS00580 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS00580 PF17158 Membrane-associated sensor, integral membrane domain DYE50_RS00585 PF12848 ABC transporter DYE50_RS00585 PF00005 ABC transporter DYE50_RS00595 PF03949 Malic enzyme, NAD binding domain DYE50_RS00595 PF00390 Malic enzyme, N-terminal domain DYE50_RS00600 PF00491 Arginase family DYE50_RS00615 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_RS00620 PF01207 Dihydrouridine synthase (Dus) DYE50_RS00635 PF09397 Ftsk gamma domain DYE50_RS00635 PF17854 FtsK alpha domain DYE50_RS00635 PF01580 FtsK/SpoIIIE family DYE50_RS00640 PF05690 Thiazole biosynthesis protein ThiG DYE50_RS00655 PF01343 Peptidase family S49 DYE50_RS00690 PF13333 Integrase core domain DYE50_RS00690 PF00665 Integrase core domain DYE50_RS00690 PF13276 HTH-like domain DYE50_RS00705 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYE50_RS00705 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYE50_RS00705 PF02772 S-adenosylmethionine synthetase, central domain DYE50_RS00710 PF10576 Iron-sulfur binding domain of endonuclease III DYE50_RS00710 PF00633 Helix-hairpin-helix motif DYE50_RS00710 PF00730 HhH-GPD superfamily base excision DNA repair protein DYE50_RS00715 PF00924 Mechanosensitive ion channel DYE50_RS00720 PF01554 MatE DYE50_RS00740 PF03853 YjeF-related protein N-terminus DYE50_RS00740 PF01256 Carbohydrate kinase DYE50_RS00745 PF00849 RNA pseudouridylate synthase DYE50_RS00745 PF01479 S4 domain DYE50_RS00750 PF00672 HAMP domain DYE50_RS00750 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS00775 PF01476 LysM domain DYE50_RS00775 PF00877 NlpC/P60 family DYE50_RS00780 PF01232 Mannitol dehydrogenase Rossmann domain DYE50_RS00780 PF08125 Mannitol dehydrogenase C-terminal domain DYE50_RS00785 PF00356 Bacterial regulatory proteins, lacI family DYE50_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS00795 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS00800 PF13416 Bacterial extracellular solute-binding protein DYE50_RS00810 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYE50_RS00810 PF00588 SpoU rRNA Methylase family DYE50_RS00830 PF00294 pfkB family carbohydrate kinase DYE50_RS00835 PF00356 Bacterial regulatory proteins, lacI family DYE50_RS00850 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS00870 PF08244 Glycosyl hydrolases family 32 C terminal DYE50_RS00870 PF00251 Glycosyl hydrolases family 32 N-terminal domain DYE50_RS00875 PF03129 Anticodon binding domain DYE50_RS00875 PF04073 Aminoacyl-tRNA editing domain DYE50_RS00875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_RS00890 PF00365 Phosphofructokinase DYE50_RS00910 PF02909 Tetracyclin repressor-like, C-terminal domain DYE50_RS00910 PF00440 Bacterial regulatory proteins, tetR family DYE50_RS00920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYE50_RS00925 PF00873 AcrB/AcrD/AcrF family DYE50_RS00940 PF01207 Dihydrouridine synthase (Dus) DYE50_RS00945 PF01026 TatD related DNase DYE50_RS00950 PF04225 Opacity-associated protein A LysM-like domain DYE50_RS00950 PF01551 Peptidase family M23 DYE50_RS00965 PF04468 PSP1 C-terminal conserved region DYE50_RS00980 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS00980 PF00360 Phytochrome region DYE50_RS00980 PF00563 EAL domain DYE50_RS00980 PF01590 GAF domain DYE50_RS01000 PF01409 tRNA synthetases class II core domain (F) DYE50_RS01015 PF01938 TRAM domain DYE50_RS01015 PF00919 Uncharacterized protein family UPF0004 DYE50_RS01015 PF04055 Radical SAM superfamily DYE50_RS01030 PF01850 PIN domain DYE50_RS01035 PF02965 Vitamin B12 dependent methionine synthase, activation domain DYE50_RS01035 PF02574 Homocysteine S-methyltransferase DYE50_RS01035 PF00809 Pterin binding enzyme DYE50_RS01035 PF02310 B12 binding domain DYE50_RS01035 PF02607 B12 binding domain DYE50_RS01040 PF00391 PEP-utilising enzyme, mobile domain DYE50_RS01040 PF02896 PEP-utilising enzyme, TIM barrel domain DYE50_RS01040 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYE50_RS01045 PF02219 Methylenetetrahydrofolate reductase DYE50_RS01055 PF00294 pfkB family carbohydrate kinase DYE50_RS01060 PF01047 MarR family DYE50_RS01065 PF16916 Dimerisation domain of Zinc Transporter DYE50_RS01065 PF01545 Cation efflux family DYE50_RS01070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS01075 PF00255 Glutathione peroxidase DYE50_RS01085 PF05191 Adenylate kinase, active site lid DYE50_RS01090 PF16193 AAA C-terminal domain DYE50_RS01090 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS01090 PF12002 MgsA AAA+ ATPase C terminal DYE50_RS01105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYE50_RS01105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYE50_RS01110 PF02649 Type I GTP cyclohydrolase folE2 DYE50_RS01115 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS01125 PF08245 Mur ligase middle domain DYE50_RS01125 PF02875 Mur ligase family, glutamate ligase domain DYE50_RS01130 PF01820 D-ala D-ala ligase N-terminus DYE50_RS01130 PF07478 D-ala D-ala ligase C-terminus DYE50_RS01140 PF01634 ATP phosphoribosyltransferase DYE50_RS01140 PF08029 HisG, C-terminal domain DYE50_RS01145 PF00475 Imidazoleglycerol-phosphate dehydratase DYE50_RS01150 PF02743 Cache domain DYE50_RS01150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS01150 PF00672 HAMP domain DYE50_RS01195 PF01037 Lrp/AsnC ligand binding domain DYE50_RS01200 PF00155 Aminotransferase class I and II DYE50_RS01480 PF13597 Anaerobic ribonucleoside-triphosphate reductase DYE50_RS01480 PF03477 ATP cone domain DYE50_RS01485 PF00221 Aromatic amino acid lyase DYE50_RS01495 PF04962 KduI/IolB family DYE50_RS01500 PF01235 Sodium:alanine symporter family DYE50_RS01505 PF00815 Histidinol dehydrogenase DYE50_RS01510 PF01327 Polypeptide deformylase DYE50_RS01515 PF00551 Formyl transferase DYE50_RS01515 PF02911 Formyl transferase, C-terminal domain DYE50_RS01520 PF03793 PASTA domain DYE50_RS01525 PF02690 Na+/Pi-cotransporter DYE50_RS01530 PF00672 HAMP domain DYE50_RS01530 PF02743 Cache domain DYE50_RS01530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS01540 PF00860 Permease family DYE50_RS01545 PF05175 Methyltransferase small domain DYE50_RS01555 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DYE50_RS01555 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_RS01555 PF00293 NUDIX domain DYE50_RS01580 PF00145 C-5 cytosine-specific DNA methylase DYE50_RS01585 PF07728 AAA domain (dynein-related subfamily) DYE50_RS01610 PF03462 PCRF domain DYE50_RS01610 PF00472 RF-1 domain DYE50_RS01615 PF01661 Macro domain DYE50_RS01620 PF00270 DEAD/DEAH box helicase DYE50_RS01620 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DYE50_RS01620 PF17191 RecG wedge domain DYE50_RS01655 PF00472 RF-1 domain DYE50_RS01655 PF03462 PCRF domain DYE50_RS01675 PF17191 RecG wedge domain DYE50_RS01675 PF00270 DEAD/DEAH box helicase DYE50_RS01675 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DYE50_RS01750 PF04542 Sigma-70 region 2 DYE50_RS01750 PF04539 Sigma-70 region 3 DYE50_RS01750 PF00140 Sigma-70 factor, region 1.2 DYE50_RS01750 PF04545 Sigma-70, region 4 DYE50_RS01810 PF03979 Sigma-70 factor, region 1.1 DYE50_RS01810 PF00140 Sigma-70 factor, region 1.2 DYE50_RS01810 PF04542 Sigma-70 region 2 DYE50_RS01810 PF04545 Sigma-70, region 4 DYE50_RS01810 PF04539 Sigma-70 region 3 DYE50_RS01900 PF01202 Shikimate kinase DYE50_RS01930 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYE50_RS01930 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYE50_RS01930 PF10371 Domain of unknown function DYE50_RS01930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_RS01930 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYE50_RS01940 PF01381 Helix-turn-helix DYE50_RS01970 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DYE50_RS01980 PF00056 lactate/malate dehydrogenase, NAD binding domain DYE50_RS01980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYE50_RS01995 PF00682 HMGL-like DYE50_RS01995 PF07836 DmpG-like communication domain DYE50_RS02005 PF02743 Cache domain DYE50_RS02005 PF00672 HAMP domain DYE50_RS02005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS02010 PF00300 Histidine phosphatase superfamily (branch 1) DYE50_RS02015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYE50_RS02025 PF00293 NUDIX domain DYE50_RS02040 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_RS02050 PF13229 Right handed beta helix region DYE50_RS02060 PF16491 CAAX prenyl protease N-terminal, five membrane helices DYE50_RS02060 PF01435 Peptidase family M48 DYE50_RS02090 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS02090 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS02090 PF00563 EAL domain DYE50_RS02095 PF09084 NMT1/THI5 like DYE50_RS02110 PF02310 B12 binding domain DYE50_RS02110 PF04055 Radical SAM superfamily DYE50_RS02125 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_RS02125 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_RS02140 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_RS02140 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_RS02150 PF07055 Enoyl reductase FAD binding domain DYE50_RS02150 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DYE50_RS02150 PF12241 Trans-2-enoyl-CoA reductase catalytic region DYE50_RS02155 PF01180 Dihydroorotate dehydrogenase DYE50_RS02160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYE50_RS02170 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS02175 PF01063 Amino-transferase class IV DYE50_RS02180 PF02654 Cobalamin-5-phosphate synthase DYE50_RS02190 PF03061 Thioesterase superfamily DYE50_RS02195 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS02195 PF00072 Response regulator receiver domain DYE50_RS02210 PF00258 Flavodoxin DYE50_RS02210 PF00753 Metallo-beta-lactamase superfamily DYE50_RS02220 PF02386 Cation transport protein DYE50_RS02225 PF02254 TrkA-N domain DYE50_RS02225 PF02080 TrkA-C domain DYE50_RS02230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYE50_RS02235 PF03422 Carbohydrate binding module (family 6) DYE50_RS02235 PF00457 Glycosyl hydrolases family 11 DYE50_RS02235 PF01522 Polysaccharide deacetylase DYE50_RS02240 PF00072 Response regulator receiver domain DYE50_RS02250 PF00072 Response regulator receiver domain DYE50_RS02250 PF00486 Transcriptional regulatory protein, C terminal DYE50_RS02255 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS02255 PF00672 HAMP domain DYE50_RS02260 PF00011 Hsp20/alpha crystallin family DYE50_RS02270 PF02779 Transketolase, pyrimidine binding domain DYE50_RS02270 PF00456 Transketolase, thiamine diphosphate binding domain DYE50_RS02275 PF01790 Prolipoprotein diacylglyceryl transferase DYE50_RS02280 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_RS02285 PF03572 Peptidase family S41 DYE50_RS02285 PF00595 PDZ domain DYE50_RS02300 PF00158 Sigma-54 interaction domain DYE50_RS02300 PF02954 Bacterial regulatory protein, Fis family DYE50_RS02300 PF13185 GAF domain DYE50_RS02305 PF00588 SpoU rRNA Methylase family DYE50_RS02325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYE50_RS02330 PF17137 Domain of unknown function (DUF5110) DYE50_RS02330 PF16338 Domain of unknown function (DUF4968) DYE50_RS02330 PF01055 Glycosyl hydrolases family 31 DYE50_RS02330 PF13802 Galactose mutarotase-like DYE50_RS02335 PF07687 Peptidase dimerisation domain DYE50_RS02335 PF01546 Peptidase family M20/M25/M40 DYE50_RS02340 PF00999 Sodium/hydrogen exchanger family DYE50_RS02345 PF00005 ABC transporter DYE50_RS02345 PF08402 TOBE domain DYE50_RS02365 PF07650 KH domain DYE50_RS02365 PF01926 50S ribosome-binding GTPase DYE50_RS02370 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DYE50_RS02375 PF01488 Shikimate / quinate 5-dehydrogenase DYE50_RS02375 PF08501 Shikimate dehydrogenase substrate binding domain DYE50_RS02380 PF04715 Anthranilate synthase component I, N terminal region DYE50_RS02380 PF00425 chorismate binding enzyme DYE50_RS02385 PF00117 Glutamine amidotransferase class-I DYE50_RS02385 PF02885 Glycosyl transferase family, helical bundle domain DYE50_RS02385 PF00591 Glycosyl transferase family, a/b domain DYE50_RS02390 PF00128 Alpha amylase, catalytic domain DYE50_RS02395 PF00218 Indole-3-glycerol phosphate synthase DYE50_RS02400 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS02405 PF00290 Tryptophan synthase alpha chain DYE50_RS02415 PF00672 HAMP domain DYE50_RS02415 PF02743 Cache domain DYE50_RS02415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS02420 PF18073 Rubredoxin metal binding domain DYE50_RS02420 PF06745 KaiC DYE50_RS02425 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_RS02435 PF00471 Ribosomal protein L33 DYE50_RS02445 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYE50_RS02450 PF00467 KOW motif DYE50_RS02450 PF02357 Transcription termination factor nusG DYE50_RS02455 PF03946 Ribosomal protein L11, N-terminal domain DYE50_RS02455 PF00298 Ribosomal protein L11, RNA binding domain DYE50_RS02460 PF00687 Ribosomal protein L1p/L10e family DYE50_RS02465 PF00466 Ribosomal protein L10 DYE50_RS02470 PF00542 Ribosomal protein L7/L12 C-terminal domain DYE50_RS02470 PF16320 Ribosomal protein L7/L12 dimerisation domain DYE50_RS02475 PF04561 RNA polymerase Rpb2, domain 2 DYE50_RS02475 PF04560 RNA polymerase Rpb2, domain 7 DYE50_RS02475 PF00562 RNA polymerase Rpb2, domain 6 DYE50_RS02475 PF10385 RNA polymerase beta subunit external 1 domain DYE50_RS02475 PF04565 RNA polymerase Rpb2, domain 3 DYE50_RS02475 PF04563 RNA polymerase beta subunit DYE50_RS02480 PF04983 RNA polymerase Rpb1, domain 3 DYE50_RS02480 PF04998 RNA polymerase Rpb1, domain 5 DYE50_RS02480 PF00623 RNA polymerase Rpb1, domain 2 DYE50_RS02480 PF04997 RNA polymerase Rpb1, domain 1 DYE50_RS02480 PF05000 RNA polymerase Rpb1, domain 4 DYE50_RS02485 PF00164 Ribosomal protein S12/S23 DYE50_RS02490 PF00177 Ribosomal protein S7p/S5e DYE50_RS02495 PF03144 Elongation factor Tu domain 2 DYE50_RS02495 PF03143 Elongation factor Tu C-terminal domain DYE50_RS02495 PF00009 Elongation factor Tu GTP binding domain DYE50_RS02500 PF00338 Ribosomal protein S10p/S20e DYE50_RS02505 PF00297 Ribosomal protein L3 DYE50_RS02510 PF00573 Ribosomal protein L4/L1 family DYE50_RS02515 PF00276 Ribosomal protein L23 DYE50_RS02520 PF00181 Ribosomal Proteins L2, RNA binding domain DYE50_RS02520 PF03947 Ribosomal Proteins L2, C-terminal domain DYE50_RS02525 PF00203 Ribosomal protein S19 DYE50_RS02530 PF00237 Ribosomal protein L22p/L17e DYE50_RS02535 PF00189 Ribosomal protein S3, C-terminal domain DYE50_RS02535 PF07650 KH domain DYE50_RS02540 PF00252 Ribosomal protein L16p/L10e DYE50_RS02545 PF00831 Ribosomal L29 protein DYE50_RS02550 PF00366 Ribosomal protein S17 DYE50_RS02555 PF00238 Ribosomal protein L14p/L23e DYE50_RS02560 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYE50_RS02560 PF00467 KOW motif DYE50_RS02565 PF00281 Ribosomal protein L5 DYE50_RS02565 PF00673 ribosomal L5P family C-terminus DYE50_RS02570 PF00253 Ribosomal protein S14p/S29e DYE50_RS02575 PF00410 Ribosomal protein S8 DYE50_RS02580 PF00347 Ribosomal protein L6 DYE50_RS02585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYE50_RS02590 PF00333 Ribosomal protein S5, N-terminal domain DYE50_RS02590 PF03719 Ribosomal protein S5, C-terminal domain DYE50_RS02595 PF00327 Ribosomal protein L30p/L7e DYE50_RS02600 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYE50_RS02605 PF00344 SecY translocase DYE50_RS02610 PF00444 Ribosomal protein L36 DYE50_RS02615 PF00416 Ribosomal protein S13/S18 DYE50_RS02620 PF00411 Ribosomal protein S11 DYE50_RS02625 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYE50_RS02625 PF01000 RNA polymerase Rpb3/RpoA insert domain DYE50_RS02625 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYE50_RS02630 PF01196 Ribosomal protein L17 DYE50_RS02640 PF02743 Cache domain DYE50_RS02640 PF00672 HAMP domain DYE50_RS02640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS02645 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_RS02650 PF00196 Bacterial regulatory proteins, luxR family DYE50_RS02650 PF00072 Response regulator receiver domain DYE50_RS02695 PF00665 Integrase core domain DYE50_RS02695 PF13333 Integrase core domain DYE50_RS02695 PF13276 HTH-like domain DYE50_RS02795 PF01926 50S ribosome-binding GTPase DYE50_RS02795 PF12631 MnmE helical domain DYE50_RS02795 PF10396 GTP-binding protein TrmE N-terminus DYE50_RS02805 PF01966 HD domain DYE50_RS02810 PF01380 SIS domain DYE50_RS02815 PF00657 GDSL-like Lipase/Acylhydrolase DYE50_RS02825 PF04306 Protein of unknown function (DUF456) DYE50_RS02835 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYE50_RS02845 PF08402 TOBE domain DYE50_RS02845 PF00005 ABC transporter DYE50_RS02850 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS02855 PF00672 HAMP domain DYE50_RS02855 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_RS02865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DYE50_RS02865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DYE50_RS02880 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_RS02880 PF00672 HAMP domain DYE50_RS02890 PF01740 STAS domain DYE50_RS02895 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS02900 PF06971 Putative DNA-binding protein N-terminus DYE50_RS02900 PF02629 CoA binding domain DYE50_RS02905 PF01921 tRNA synthetases class I (K) DYE50_RS02910 PF00209 Sodium:neurotransmitter symporter family DYE50_RS02960 PF02261 Aspartate decarboxylase DYE50_RS02965 PF03309 Type III pantothenate kinase DYE50_RS02975 PF02441 Flavoprotein DYE50_RS02975 PF04127 DNA / pantothenate metabolism flavoprotein DYE50_RS02980 PF02569 Pantoate-beta-alanine ligase DYE50_RS02985 PF02548 Ketopantoate hydroxymethyltransferase DYE50_RS02995 PF07730 Histidine kinase DYE50_RS02995 PF17200 Single Cache domain 2 DYE50_RS03000 PF00196 Bacterial regulatory proteins, luxR family DYE50_RS03000 PF00072 Response regulator receiver domain DYE50_RS03005 PF00871 Acetokinase family DYE50_RS03015 PF01965 DJ-1/PfpI family DYE50_RS03020 PF00486 Transcriptional regulatory protein, C terminal DYE50_RS03020 PF00072 Response regulator receiver domain DYE50_RS03025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYE50_RS03025 PF00072 Response regulator receiver domain DYE50_RS03025 PF01627 Hpt domain DYE50_RS03025 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS03025 PF00672 HAMP domain DYE50_RS03035 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYE50_RS03040 PF01176 Translation initiation factor 1A / IF-1 DYE50_RS03045 PF01556 DnaJ C terminal domain DYE50_RS03045 PF00226 DnaJ domain DYE50_RS03080 PF01882 Protein of unknown function DUF58 DYE50_RS03085 PF07726 ATPase family associated with various cellular activities (AAA) DYE50_RS03085 PF17863 AAA lid domain DYE50_RS03105 PF03600 Citrate transporter DYE50_RS03115 PF01554 MatE DYE50_RS03120 PF01926 50S ribosome-binding GTPase DYE50_RS03120 PF06071 Protein of unknown function (DUF933) DYE50_RS03130 PF00009 Elongation factor Tu GTP binding domain DYE50_RS03130 PF00679 Elongation factor G C-terminus DYE50_RS03130 PF03144 Elongation factor Tu domain 2 DYE50_RS03130 PF14492 Elongation Factor G, domain II DYE50_RS03130 PF03764 Elongation factor G, domain IV DYE50_RS03145 PF01121 Dephospho-CoA kinase DYE50_RS03150 PF01367 5'-3' exonuclease, C-terminal SAM fold DYE50_RS03150 PF01612 3'-5' exonuclease DYE50_RS03150 PF00476 DNA polymerase family A DYE50_RS03150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYE50_RS03180 PF00266 Aminotransferase class-V DYE50_RS03185 PF16199 Radical_SAM C-terminal domain DYE50_RS03185 PF04055 Radical SAM superfamily DYE50_RS03190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYE50_RS03195 PF02810 SEC-C motif DYE50_RS03195 PF07517 SecA DEAD-like domain DYE50_RS03195 PF01043 SecA preprotein cross-linking domain DYE50_RS03195 PF07516 SecA Wing and Scaffold domain DYE50_RS03210 PF00849 RNA pseudouridylate synthase DYE50_RS03210 PF01479 S4 domain DYE50_RS03225 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS03225 PF00563 EAL domain DYE50_RS03225 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS03230 PF02719 Polysaccharide biosynthesis protein DYE50_RS03235 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYE50_RS03245 PF00111 2Fe-2S iron-sulfur cluster binding domain DYE50_RS03245 PF01799 [2Fe-2S] binding domain DYE50_RS03255 PF02547 Queuosine biosynthesis protein DYE50_RS03260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS03260 PF00672 HAMP domain DYE50_RS03260 PF17200 Single Cache domain 2 DYE50_RS03265 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYE50_RS03265 PF05491 RuvB C-terminal winged helix domain DYE50_RS03265 PF17864 RuvB AAA lid domain DYE50_RS03270 PF01330 RuvA N terminal domain DYE50_RS03285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYE50_RS03290 PF02896 PEP-utilising enzyme, TIM barrel domain DYE50_RS03290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_RS03290 PF00381 PTS HPr component phosphorylation site DYE50_RS03290 PF05524 PEP-utilising enzyme, N-terminal DYE50_RS03290 PF00391 PEP-utilising enzyme, mobile domain DYE50_RS03310 PF01554 MatE DYE50_RS03330 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS03330 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS03330 PF00563 EAL domain DYE50_RS03335 PF16258 Domain of unknown function (DUF4912) DYE50_RS03345 PF03687 Uncharacterised protein family (UPF0164) DYE50_RS03370 PF02381 MraZ protein, putative antitoxin-like DYE50_RS03375 PF01795 MraW methylase family DYE50_RS03385 PF08245 Mur ligase middle domain DYE50_RS03385 PF01225 Mur ligase family, catalytic domain DYE50_RS03385 PF02875 Mur ligase family, glutamate ligase domain DYE50_RS03390 PF01098 Cell cycle protein DYE50_RS03395 PF08478 POTRA domain, FtsQ-type DYE50_RS03395 PF03799 Cell division protein FtsQ DYE50_RS03400 PF02491 SHS2 domain inserted in FTSA DYE50_RS03405 PF00091 Tubulin/FtsZ family, GTPase domain DYE50_RS03405 PF12327 FtsZ family, C-terminal domain DYE50_RS03410 PF00589 Phage integrase family DYE50_RS03410 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_RS03420 PF02481 DNA recombination-mediator protein A DYE50_RS03425 PF01396 Topoisomerase DNA binding C4 zinc finger DYE50_RS03425 PF01751 Toprim domain DYE50_RS03425 PF01131 DNA topoisomerase DYE50_RS03430 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_RS03430 PF00589 Phage integrase family DYE50_RS03435 PF02743 Cache domain DYE50_RS03435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS03435 PF00672 HAMP domain DYE50_RS03440 PF00227 Proteasome subunit DYE50_RS03445 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS03445 PF07724 AAA domain (Cdc48 subfamily) DYE50_RS03455 PF08448 PAS fold DYE50_RS03455 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS03470 PF00920 Dehydratase family DYE50_RS03475 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS03475 PF08448 PAS fold DYE50_RS03480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYE50_RS03480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYE50_RS03480 PF02142 MGS-like domain DYE50_RS03490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_RS03490 PF00205 Thiamine pyrophosphate enzyme, central domain DYE50_RS03490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_RS03495 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_RS03495 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_RS03500 PF07075 Protein of unknown function (DUF1343) DYE50_RS03515 PF01116 Fructose-bisphosphate aldolase class-II DYE50_RS03530 PF14842 FliG N-terminal domain DYE50_RS03530 PF14841 FliG middle domain DYE50_RS03530 PF01706 FliG C-terminal domain DYE50_RS03535 PF00675 Insulinase (Peptidase family M16) DYE50_RS03535 PF08367 Peptidase M16C associated DYE50_RS03535 PF05193 Peptidase M16 inactive domain DYE50_RS03550 PF02576 RimP N-terminal domain DYE50_RS03550 PF17384 RimP C-terminal SH3 domain DYE50_RS03555 PF13184 NusA-like KH domain DYE50_RS03555 PF08529 NusA N-terminal domain DYE50_RS03555 PF00575 S1 RNA binding domain DYE50_RS03560 PF04760 Translation initiation factor IF-2, N-terminal region DYE50_RS03560 PF11987 Translation-initiation factor 2 DYE50_RS03560 PF00009 Elongation factor Tu GTP binding domain DYE50_RS03565 PF02033 Ribosome-binding factor A DYE50_RS03570 PF12437 Glutamine synthetase type III N terminal DYE50_RS03570 PF18318 Glutamine synthetase C-terminal domain DYE50_RS03570 PF00120 Glutamine synthetase, catalytic domain DYE50_RS03575 PF00733 Asparagine synthase DYE50_RS03575 PF13537 Glutamine amidotransferase domain DYE50_RS03580 PF00117 Glutamine amidotransferase class-I DYE50_RS03580 PF06418 CTP synthase N-terminus DYE50_RS03585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYE50_RS03585 PF00117 Glutamine amidotransferase class-I DYE50_RS03600 PF01554 MatE DYE50_RS03605 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS03615 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_RS03620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYE50_RS03620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYE50_RS03620 PF02142 MGS-like domain DYE50_RS03625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_RS03625 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS03630 PF00310 Glutamine amidotransferases class-II DYE50_RS03630 PF01493 GXGXG motif DYE50_RS03630 PF04898 Glutamate synthase central domain DYE50_RS03630 PF01645 Conserved region in glutamate synthase DYE50_RS03665 PF00909 Ammonium Transporter Family DYE50_RS03670 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYE50_RS03675 PF00312 Ribosomal protein S15 DYE50_RS03680 PF00575 S1 RNA binding domain DYE50_RS03680 PF03725 3' exoribonuclease family, domain 2 DYE50_RS03680 PF01138 3' exoribonuclease family, domain 1 DYE50_RS03680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYE50_RS03680 PF00013 KH domain DYE50_RS03685 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DYE50_RS03685 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DYE50_RS03690 PF01263 Aldose 1-epimerase DYE50_RS03695 PF10509 Galactokinase galactose-binding signature DYE50_RS03695 PF00288 GHMP kinases N terminal domain DYE50_RS03695 PF08544 GHMP kinases C terminal DYE50_RS03700 PF00356 Bacterial regulatory proteins, lacI family DYE50_RS03710 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS03715 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS03720 PF01301 Glycosyl hydrolases family 35 DYE50_RS03725 PF00692 dUTPase DYE50_RS03745 PF01702 Queuine tRNA-ribosyltransferase DYE50_RS03765 PF00672 HAMP domain DYE50_RS03765 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_RS03770 PF00270 DEAD/DEAH box helicase DYE50_RS03770 PF04408 Helicase associated domain (HA2) DYE50_RS03770 PF00271 Helicase conserved C-terminal domain DYE50_RS03770 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DYE50_RS03825 PF03747 ADP-ribosylglycohydrolase DYE50_RS03860 PF08666 SAF domain DYE50_RS03860 PF03102 NeuB family DYE50_RS03875 PF01709 Transcriptional regulator DYE50_RS03880 PF02075 Crossover junction endodeoxyribonuclease RuvC DYE50_RS03890 PF00722 Glycosyl hydrolases family 16 DYE50_RS03905 PF02127 Aminopeptidase I zinc metalloprotease (M18) DYE50_RS03910 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_RS03910 PF06689 ClpX C4-type zinc finger DYE50_RS03910 PF07724 AAA domain (Cdc48 subfamily) DYE50_RS03915 PF00574 Clp protease DYE50_RS03920 PF05697 Bacterial trigger factor protein (TF) DYE50_RS03920 PF05698 Bacterial trigger factor protein (TF) C-terminus DYE50_RS03920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYE50_RS03955 PF02535 ZIP Zinc transporter DYE50_RS03960 PF00258 Flavodoxin DYE50_RS03970 PF08448 PAS fold DYE50_RS03970 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS03975 PF00440 Bacterial regulatory proteins, tetR family DYE50_RS03975 PF08361 MAATS-type transcriptional repressor, C-terminal region DYE50_RS03995 PF00005 ABC transporter DYE50_RS03995 PF00664 ABC transporter transmembrane region DYE50_RS04000 PF00664 ABC transporter transmembrane region DYE50_RS04000 PF04954 Siderophore-interacting protein DYE50_RS04000 PF08021 Siderophore-interacting FAD-binding domain DYE50_RS04000 PF00005 ABC transporter DYE50_RS04025 PF00440 Bacterial regulatory proteins, tetR family DYE50_RS04045 PF00113 Enolase, C-terminal TIM barrel domain DYE50_RS04045 PF03952 Enolase, N-terminal domain DYE50_RS04055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_RS04055 PF07196 Flagellin hook IN motif DYE50_RS04060 PF00669 Bacterial flagellin N-terminal helical region DYE50_RS04060 PF00700 Bacterial flagellin C-terminal helical region DYE50_RS04065 PF02623 FliW protein DYE50_RS04070 PF02599 Global regulator protein family DYE50_RS04075 PF00814 Glycoprotease family DYE50_RS04080 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYE50_RS04100 PF02465 Flagellar hook-associated protein 2 N-terminus DYE50_RS04100 PF07195 Flagellar hook-associated protein 2 C-terminus DYE50_RS04110 PF00700 Bacterial flagellin C-terminal helical region DYE50_RS04110 PF00669 Bacterial flagellin N-terminal helical region DYE50_RS04115 PF00700 Bacterial flagellin C-terminal helical region DYE50_RS04115 PF00669 Bacterial flagellin N-terminal helical region DYE50_RS04120 PF01725 Ham1 family DYE50_RS04145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYE50_RS04145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYE50_RS04155 PF01546 Peptidase family M20/M25/M40 DYE50_RS04155 PF07687 Peptidase dimerisation domain DYE50_RS04160 PF00005 ABC transporter DYE50_RS04160 PF09383 NIL domain DYE50_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS04170 PF00056 lactate/malate dehydrogenase, NAD binding domain DYE50_RS04170 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYE50_RS04175 PF18766 SWI2/SNF2 ATPase DYE50_RS04175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_RS04175 PF11867 Domain of unknown function (DUF3387) DYE50_RS04185 PF07693 KAP family P-loop domain DYE50_RS04195 PF01420 Type I restriction modification DNA specificity domain DYE50_RS04200 PF02384 N-6 DNA Methylase DYE50_RS04205 PF03180 NLPA lipoprotein DYE50_RS04210 PF01625 Peptide methionine sulfoxide reductase DYE50_RS04215 PF03180 NLPA lipoprotein DYE50_RS04220 PF02913 FAD linked oxidases, C-terminal domain DYE50_RS04220 PF01565 FAD binding domain DYE50_RS04225 PF00155 Aminotransferase class I and II DYE50_RS04240 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS04245 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS04250 PF00005 ABC transporter DYE50_RS04255 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_RS04260 PF00005 ABC transporter DYE50_RS04270 PF03477 ATP cone domain DYE50_RS04280 PF00005 ABC transporter DYE50_RS04285 PF02632 BioY family DYE50_RS04290 PF00795 Carbon-nitrogen hydrolase DYE50_RS04295 PF10509 Galactokinase galactose-binding signature DYE50_RS04295 PF08544 GHMP kinases C terminal DYE50_RS04300 PF01975 Survival protein SurE DYE50_RS04325 PF13476 AAA domain DYE50_RS04330 PF00375 Sodium:dicarboxylate symporter family DYE50_RS04340 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DYE50_RS04340 PF06165 Glycosyltransferase family 36 DYE50_RS04345 PF07745 Glycosyl hydrolase family 53 DYE50_RS04355 PF01551 Peptidase family M23 DYE50_RS04355 PF01476 LysM domain DYE50_RS04355 PF08525 Opacity-associated protein A N-terminal motif DYE50_RS04365 PF00005 ABC transporter DYE50_RS04365 PF00498 FHA domain DYE50_RS04365 PF01061 ABC-2 type transporter DYE50_RS04375 PF00069 Protein kinase domain DYE50_RS04375 PF03793 PASTA domain DYE50_RS04380 PF01171 PP-loop family DYE50_RS04385 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS04385 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_RS04385 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_RS04390 PF17785 PUA-like domain DYE50_RS04390 PF10672 S-adenosylmethionine-dependent methyltransferase DYE50_RS04405 PF01026 TatD related DNase DYE50_RS04410 PF00156 Phosphoribosyl transferase domain DYE50_RS04420 PF05681 Fumarate hydratase (Fumerase) DYE50_RS04420 PF05683 Fumarase C-terminus DYE50_RS04430 PF01351 Ribonuclease HII DYE50_RS04440 PF00266 Aminotransferase class-V DYE50_RS04445 PF13186 Iron-sulfur cluster-binding domain DYE50_RS04465 PF01520 N-acetylmuramoyl-L-alanine amidase DYE50_RS04475 PF04620 Flagellar filament outer layer protein Flaa DYE50_RS04485 PF06733 DEAD_2 DYE50_RS04485 PF13307 Helicase C-terminal domain DYE50_RS04500 PF00953 Glycosyl transferase family 4 DYE50_RS04505 PF08245 Mur ligase middle domain DYE50_RS04505 PF01225 Mur ligase family, catalytic domain DYE50_RS04505 PF02875 Mur ligase family, glutamate ligase domain DYE50_RS04515 PF03033 Glycosyltransferase family 28 N-terminal domain DYE50_RS04515 PF04101 Glycosyltransferase family 28 C-terminal domain DYE50_RS04525 PF12169 DNA polymerase III subunits gamma and tau domain III DYE50_RS04530 PF00989 PAS fold DYE50_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS04530 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS04535 PF00072 Response regulator receiver domain DYE50_RS04535 PF02954 Bacterial regulatory protein, Fis family DYE50_RS04535 PF00158 Sigma-54 interaction domain DYE50_RS04545 PF01649 Ribosomal protein S20 DYE50_RS04550 PF00216 Bacterial DNA-binding protein DYE50_RS04555 PF00795 Carbon-nitrogen hydrolase DYE50_RS04565 PF07497 Rho termination factor, RNA-binding domain DYE50_RS04565 PF07498 Rho termination factor, N-terminal domain DYE50_RS04565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS04575 PF04551 GcpE protein DYE50_RS04585 PF02397 Bacterial sugar transferase DYE50_RS04590 PF00534 Glycosyl transferases group 1 DYE50_RS04590 PF13439 Glycosyltransferase Family 4 DYE50_RS04595 PF00534 Glycosyl transferases group 1 DYE50_RS04595 PF13439 Glycosyltransferase Family 4 DYE50_RS04605 PF00266 Aminotransferase class-V DYE50_RS04610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_RS04610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_RS04625 PF02096 60Kd inner membrane protein DYE50_RS04630 PF02096 60Kd inner membrane protein DYE50_RS04630 PF14849 YidC periplasmic domain DYE50_RS04635 PF01467 Cytidylyltransferase-like DYE50_RS04640 PF00266 Aminotransferase class-V DYE50_RS04650 PF02096 60Kd inner membrane protein DYE50_RS04650 PF14849 YidC periplasmic domain DYE50_RS04655 PF02096 60Kd inner membrane protein DYE50_RS04665 PF03062 MBOAT, membrane-bound O-acyltransferase family DYE50_RS04670 PF00550 Phosphopantetheine attachment site DYE50_RS04675 PF00501 AMP-binding enzyme DYE50_RS04675 PF13193 AMP-binding enzyme C-terminal domain DYE50_RS04685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYE50_RS04685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYE50_RS04685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYE50_RS04690 PF01370 NAD dependent epimerase/dehydratase family DYE50_RS04715 PF02096 60Kd inner membrane protein DYE50_RS04720 PF13439 Glycosyltransferase Family 4 DYE50_RS04720 PF00534 Glycosyl transferases group 1 DYE50_RS04725 PF14849 YidC periplasmic domain DYE50_RS04725 PF02096 60Kd inner membrane protein DYE50_RS04735 PF00535 Glycosyl transferase family 2 DYE50_RS04775 PF00005 ABC transporter DYE50_RS04780 PF00483 Nucleotidyl transferase DYE50_RS04785 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DYE50_RS04790 PF16363 GDP-mannose 4,6 dehydratase DYE50_RS04795 PF04321 RmlD substrate binding domain DYE50_RS04810 PF13567 Domain of unknown function (DUF4131) DYE50_RS04810 PF00753 Metallo-beta-lactamase superfamily DYE50_RS04810 PF03772 Competence protein DYE50_RS04815 PF00398 Ribosomal RNA adenine dimethylase DYE50_RS04825 PF00849 RNA pseudouridylate synthase DYE50_RS04830 PF00849 RNA pseudouridylate synthase DYE50_RS04840 PF00155 Aminotransferase class I and II DYE50_RS04845 PF00534 Glycosyl transferases group 1 DYE50_RS04845 PF08323 Starch synthase catalytic domain DYE50_RS04850 PF01250 Ribosomal protein S6 DYE50_RS04855 PF00436 Single-strand binding protein family DYE50_RS04860 PF01084 Ribosomal protein S18 DYE50_RS04865 PF01281 Ribosomal protein L9, N-terminal domain DYE50_RS04865 PF03948 Ribosomal protein L9, C-terminal domain DYE50_RS04870 PF03796 DnaB-like helicase C terminal domain DYE50_RS04870 PF00772 DnaB-like helicase N terminal domain DYE50_RS04885 PF05958 tRNA (Uracil-5-)-methyltransferase DYE50_RS04895 PF12627 Probable RNA and SrmB- binding site of polymerase A DYE50_RS04895 PF01743 Poly A polymerase head domain DYE50_RS04895 PF12626 Polymerase A arginine-rich C-terminus DYE50_RS04900 PF01259 SAICAR synthetase DYE50_RS04910 PF09334 tRNA synthetases class I (M) DYE50_RS04910 PF01588 Putative tRNA binding domain DYE50_RS04915 PF13419 Haloacid dehalogenase-like hydrolase DYE50_RS04920 PF01475 Ferric uptake regulator family DYE50_RS04925 PF02915 Rubrerythrin DYE50_RS04935 PF12706 Beta-lactamase superfamily domain DYE50_RS04935 PF00753 Metallo-beta-lactamase superfamily DYE50_RS04940 PF08463 EcoEI R protein C-terminal DYE50_RS04940 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_RS04940 PF00271 Helicase conserved C-terminal domain DYE50_RS04940 PF04851 Type III restriction enzyme, res subunit DYE50_RS04945 PF13784 Fic/DOC family N-terminal DYE50_RS04945 PF02661 Fic/DOC family DYE50_RS04955 PF01420 Type I restriction modification DNA specificity domain DYE50_RS04955 PF01420 Type I restriction modification DNA specificity domain DYE50_RS04980 PF02384 N-6 DNA Methylase DYE50_RS04980 PF12161 HsdM N-terminal domain DYE50_RS04985 PF00005 ABC transporter DYE50_RS05005 PF00694 Aconitase C-terminal domain DYE50_RS05010 PF00330 Aconitase family (aconitate hydratase) DYE50_RS05015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_RS05015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_RS05025 PF04055 Radical SAM superfamily DYE50_RS05055 PF02163 Peptidase family M50 DYE50_RS05055 PF17820 PDZ domain DYE50_RS05060 PF13288 DXP reductoisomerase C-terminal domain DYE50_RS05060 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYE50_RS05060 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYE50_RS05070 PF01255 Putative undecaprenyl diphosphate synthase DYE50_RS05075 PF01765 Ribosome recycling factor DYE50_RS05080 PF00889 Elongation factor TS DYE50_RS05085 PF00318 Ribosomal protein S2 DYE50_RS05090 PF02545 Maf-like protein DYE50_RS05105 PF01467 Cytidylyltransferase-like DYE50_RS05110 PF01783 Ribosomal L32p protein family DYE50_RS05115 PF00550 Phosphopantetheine attachment site DYE50_RS05120 PF14622 Ribonuclease-III-like DYE50_RS05120 PF00035 Double-stranded RNA binding motif DYE50_RS05125 PF01197 Ribosomal protein L31 DYE50_RS05130 PF00672 HAMP domain DYE50_RS05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS05130 PF02743 Cache domain DYE50_RS05135 PF10672 S-adenosylmethionine-dependent methyltransferase DYE50_RS05140 PF00270 DEAD/DEAH box helicase DYE50_RS05140 PF00271 Helicase conserved C-terminal domain DYE50_RS05145 PF00005 ABC transporter DYE50_RS05145 PF12848 ABC transporter DYE50_RS05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS05150 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS05150 PF01627 Hpt domain DYE50_RS05150 PF00072 Response regulator receiver domain DYE50_RS05160 PF13333 Integrase core domain DYE50_RS05160 PF13276 HTH-like domain DYE50_RS05160 PF00665 Integrase core domain DYE50_RS05175 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYE50_RS05220 PF01139 tRNA-splicing ligase RtcB DYE50_RS05240 PF10127 RNA repair pathway DNA polymerase beta family DYE50_RS05270 PF14841 FliG middle domain DYE50_RS05270 PF14842 FliG N-terminal domain DYE50_RS05270 PF01706 FliG C-terminal domain DYE50_RS05365 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_RS05365 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS05365 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_RS05405 PF11799 impB/mucB/samB family C-terminal domain DYE50_RS05405 PF00817 impB/mucB/samB family DYE50_RS05405 PF11798 IMS family HHH motif DYE50_RS05410 PF08450 SMP-30/Gluconolactonase/LRE-like region DYE50_RS05420 PF05362 Lon protease (S16) C-terminal proteolytic domain DYE50_RS05420 PF02190 ATP-dependent protease La (LON) substrate-binding domain DYE50_RS05420 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS05440 PF03576 Peptidase family S58 DYE50_RS05445 PF02583 Metal-sensitive transcriptional repressor DYE50_RS05450 PF00403 Heavy-metal-associated domain DYE50_RS05470 PF00899 ThiF family DYE50_RS05475 PF02661 Fic/DOC family DYE50_RS05475 PF12728 Helix-turn-helix domain DYE50_RS05480 PF01555 DNA methylase DYE50_RS05485 PF04556 DpnII restriction endonuclease DYE50_RS05490 PF04556 DpnII restriction endonuclease DYE50_RS05495 PF02086 D12 class N6 adenine-specific DNA methyltransferase DYE50_RS05500 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_RS05500 PF00672 HAMP domain DYE50_RS05510 PF04237 YjbR DYE50_RS05525 PF01209 ubiE/COQ5 methyltransferase family DYE50_RS05555 PF13635 Domain of unknown function (DUF4143) DYE50_RS05555 PF13173 AAA domain DYE50_RS05565 PF01661 Macro domain DYE50_RS05595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_RS05595 PF03129 Anticodon binding domain DYE50_RS05595 PF04073 Aminoacyl-tRNA editing domain DYE50_RS05605 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_RS05615 PF00583 Acetyltransferase (GNAT) family DYE50_RS05625 PF02690 Na+/Pi-cotransporter DYE50_RS05630 PF01042 Endoribonuclease L-PSP DYE50_RS05635 PF12706 Beta-lactamase superfamily domain DYE50_RS05655 PF00520 Ion transport protein DYE50_RS05655 PF00027 Cyclic nucleotide-binding domain DYE50_RS05680 PF00563 EAL domain DYE50_RS05680 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS05680 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS05690 PF09308 LuxQ, periplasmic DYE50_RS05690 PF00072 Response regulator receiver domain DYE50_RS05690 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS05700 PF13847 Methyltransferase domain DYE50_RS05720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS05720 PF02743 Cache domain DYE50_RS05720 PF00672 HAMP domain DYE50_RS05740 PF12146 Serine aminopeptidase, S33 DYE50_RS05760 PF00294 pfkB family carbohydrate kinase DYE50_RS05775 PF04463 Protein of unknown function (DUF523) DYE50_RS05835 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYE50_RS05835 PF00753 Metallo-beta-lactamase superfamily DYE50_RS05870 PF03807 NADP oxidoreductase coenzyme F420-dependent DYE50_RS05870 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYE50_RS05875 PF01243 Pyridoxamine 5'-phosphate oxidase DYE50_RS05875 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DYE50_RS05880 PF02311 AraC-like ligand binding domain DYE50_RS05880 PF12833 Helix-turn-helix domain DYE50_RS05900 PF08279 HTH domain DYE50_RS05900 PF13280 WYL domain DYE50_RS05905 PF01965 DJ-1/PfpI family DYE50_RS05910 PF12833 Helix-turn-helix domain DYE50_RS05930 PF00005 ABC transporter DYE50_RS05930 PF17755 UvrA DNA-binding domain DYE50_RS05930 PF17760 UvrA interaction domain DYE50_RS05975 PF00583 Acetyltransferase (GNAT) family DYE50_RS05995 PF00753 Metallo-beta-lactamase superfamily DYE50_RS05995 PF16123 Hydroxyacylglutathione hydrolase C-terminus DYE50_RS06005 PF06445 GyrI-like small molecule binding domain DYE50_RS06005 PF13411 MerR HTH family regulatory protein DYE50_RS06020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_RS06020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_RS06045 PF01554 MatE DYE50_RS06080 PF00398 Ribosomal RNA adenine dimethylase DYE50_RS06085 PF00583 Acetyltransferase (GNAT) family DYE50_RS06105 PF02567 Phenazine biosynthesis-like protein DYE50_RS06110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS06115 PF12464 Maltose acetyltransferase DYE50_RS06115 PF14602 Hexapeptide repeat of succinyl-transferase DYE50_RS06125 PF00958 GMP synthase C terminal domain DYE50_RS06125 PF00117 Glutamine amidotransferase class-I DYE50_RS06125 PF03352 Methyladenine glycosylase DYE50_RS06125 PF13302 Acetyltransferase (GNAT) domain DYE50_RS06125 PF13673 Acetyltransferase (GNAT) domain DYE50_RS06130 PF02522 Aminoglycoside 3-N-acetyltransferase DYE50_RS06140 PF01381 Helix-turn-helix DYE50_RS06155 PF13614 AAA domain DYE50_RS06165 PF01177 Asp/Glu/Hydantoin racemase DYE50_RS06185 PF11208 Protein of unknown function (DUF2992) DYE50_RS06210 PF05437 Branched-chain amino acid transport protein (AzlD) DYE50_RS06215 PF03591 AzlC protein DYE50_RS06230 PF13419 Haloacid dehalogenase-like hydrolase DYE50_RS06300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYE50_RS06310 PF07478 D-ala D-ala ligase C-terminus DYE50_RS06310 PF01820 D-ala D-ala ligase N-terminus DYE50_RS06320 PF01943 Polysaccharide biosynthesis protein DYE50_RS06330 PF00132 Bacterial transferase hexapeptide (six repeats) DYE50_RS06355 PF01501 Glycosyl transferase family 8 DYE50_RS06370 PF01050 Mannose-6-phosphate isomerase DYE50_RS06370 PF00483 Nucleotidyl transferase DYE50_RS06375 PF01238 Phosphomannose isomerase type I DYE50_RS06410 PF01661 Macro domain DYE50_RS06440 PF03747 ADP-ribosylglycohydrolase DYE50_RS06465 PF07728 AAA domain (dynein-related subfamily) DYE50_RS06465 PF12102 Domain of unknown function (DUF3578) DYE50_RS06480 PF13361 UvrD-like helicase C-terminal domain DYE50_RS06480 PF12705 PD-(D/E)XK nuclease superfamily DYE50_RS06480 PF00580 UvrD/REP helicase N-terminal domain DYE50_RS06505 PF01555 DNA methylase DYE50_RS06510 PF04851 Type III restriction enzyme, res subunit DYE50_RS06575 PF01706 FliG C-terminal domain DYE50_RS06575 PF14841 FliG middle domain DYE50_RS06575 PF14842 FliG N-terminal domain DYE50_RS06595 PF02384 N-6 DNA Methylase DYE50_RS06595 PF12161 HsdM N-terminal domain DYE50_RS06600 PF13438 Domain of unknown function (DUF4113) DYE50_RS06600 PF11799 impB/mucB/samB family C-terminal domain DYE50_RS06600 PF00817 impB/mucB/samB family DYE50_RS06625 PF13333 Integrase core domain DYE50_RS06625 PF00665 Integrase core domain DYE50_RS06625 PF13276 HTH-like domain DYE50_RS06635 PF01098 Cell cycle protein DYE50_RS06640 PF03717 Penicillin-binding Protein dimerisation domain DYE50_RS06640 PF00905 Penicillin binding protein transpeptidase domain DYE50_RS06675 PF04539 Sigma-70 region 3 DYE50_RS06675 PF04545 Sigma-70, region 4 DYE50_RS06675 PF04542 Sigma-70 region 2 DYE50_RS06675 PF00140 Sigma-70 factor, region 1.2 DYE50_RS06675 PF03979 Sigma-70 factor, region 1.1 DYE50_RS06680 PF08275 DNA primase catalytic core, N-terminal domain DYE50_RS06680 PF01807 CHC2 zinc finger DYE50_RS06695 PF00753 Metallo-beta-lactamase superfamily DYE50_RS06695 PF12706 Beta-lactamase superfamily domain DYE50_RS06720 PF13735 tRNA nucleotidyltransferase domain 2 putative DYE50_RS06720 PF12627 Probable RNA and SrmB- binding site of polymerase A DYE50_RS06720 PF01743 Poly A polymerase head domain DYE50_RS06745 PF08340 Domain of unknown function (DUF1732) DYE50_RS06745 PF03755 YicC-like family, N-terminal region DYE50_RS06750 PF00579 tRNA synthetases class I (W and Y) DYE50_RS06755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYE50_RS06760 PF02875 Mur ligase family, glutamate ligase domain DYE50_RS06760 PF08245 Mur ligase middle domain DYE50_RS06765 PF00842 Alanine racemase, C-terminal domain DYE50_RS06765 PF01168 Alanine racemase, N-terminal domain DYE50_RS06775 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS06775 PF14821 Threonine synthase N terminus DYE50_RS06785 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_RS06790 PF00270 DEAD/DEAH box helicase DYE50_RS06790 PF00271 Helicase conserved C-terminal domain DYE50_RS06790 PF02559 CarD-like/TRCF domain DYE50_RS06790 PF17757 UvrB interaction domain DYE50_RS06790 PF03461 TRCF domain DYE50_RS06825 PF01813 ATP synthase subunit D DYE50_RS06830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS06830 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_RS06835 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_RS06835 PF16886 ATPsynthase alpha/beta subunit N-term extension DYE50_RS06835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS06845 PF01991 ATP synthase (E/31 kDa) subunit DYE50_RS06865 PF00460 Flagella basal body rod protein DYE50_RS06865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_RS06905 PF10531 SLBB domain DYE50_RS06905 PF13375 RnfC Barrel sandwich hybrid domain DYE50_RS06905 PF13237 4Fe-4S dicluster domain DYE50_RS06905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DYE50_RS06930 PF00330 Aconitase family (aconitate hydratase) DYE50_RS06945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYE50_RS06945 PF00205 Thiamine pyrophosphate enzyme, central domain DYE50_RS06945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYE50_RS06960 PF10502 Signal peptidase, peptidase S26 DYE50_RS06975 PF01226 Formate/nitrite transporter DYE50_RS06980 PF01039 Carboxyl transferase domain DYE50_RS07030 PF00437 Type II/IV secretion system protein DYE50_RS07035 PF03958 Bacterial type II/III secretion system short domain DYE50_RS07035 PF00263 Bacterial type II and III secretion system protein DYE50_RS07040 PF02601 Exonuclease VII, large subunit DYE50_RS07040 PF13742 OB-fold nucleic acid binding domain DYE50_RS07045 PF02609 Exonuclease VII small subunit DYE50_RS07050 PF08676 MutL C terminal dimerisation domain DYE50_RS07050 PF01119 DNA mismatch repair protein, C-terminal domain DYE50_RS07055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS07055 PF00672 HAMP domain DYE50_RS07055 PF02743 Cache domain DYE50_RS07060 PF01547 Bacterial extracellular solute-binding protein DYE50_RS07065 PF00072 Response regulator receiver domain DYE50_RS07065 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS07115 PF01740 STAS domain DYE50_RS07130 PF00270 DEAD/DEAH box helicase DYE50_RS07130 PF00271 Helicase conserved C-terminal domain DYE50_RS07135 PF02463 RecF/RecN/SMC N terminal domain DYE50_RS07135 PF06470 SMC proteins Flexible Hinge Domain DYE50_RS07155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_RS07155 PF02403 Seryl-tRNA synthetase N-terminal domain DYE50_RS07160 PF01594 AI-2E family transporter DYE50_RS07165 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS07170 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS07175 PF00209 Sodium:neurotransmitter symporter family DYE50_RS07185 PF03120 NAD-dependent DNA ligase OB-fold domain DYE50_RS07185 PF01653 NAD-dependent DNA ligase adenylation domain DYE50_RS07185 PF00533 BRCA1 C Terminus (BRCT) domain DYE50_RS07190 PF02390 Putative methyltransferase DYE50_RS07210 PF00817 impB/mucB/samB family DYE50_RS07210 PF11798 IMS family HHH motif DYE50_RS07210 PF11799 impB/mucB/samB family C-terminal domain DYE50_RS07220 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_RS07220 PF00942 Cellulose binding domain DYE50_RS07230 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS07235 PF11862 Domain of unknown function (DUF3382) DYE50_RS07235 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS07240 PF00005 ABC transporter DYE50_RS07240 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_RS07245 PF00005 ABC transporter DYE50_RS07250 PF00849 RNA pseudouridylate synthase DYE50_RS07250 PF01479 S4 domain DYE50_RS07260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_RS07260 PF00460 Flagella basal body rod protein DYE50_RS07265 PF00563 EAL domain DYE50_RS07265 PF00498 FHA domain DYE50_RS07265 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS07270 PF13393 Histidyl-tRNA synthetase DYE50_RS07280 PF00293 NUDIX domain DYE50_RS07290 PF13419 Haloacid dehalogenase-like hydrolase DYE50_RS07295 PF17131 Outer membrane lipoprotein-sorting protein DYE50_RS07310 PF01022 Bacterial regulatory protein, arsR family DYE50_RS07325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DYE50_RS07330 PF14489 QueF-like protein DYE50_RS07335 PF02592 Putative vitamin uptake transporter DYE50_RS07340 PF00207 Alpha-2-macroglobulin family DYE50_RS07340 PF17962 Bacterial macroglobulin domain 6 DYE50_RS07340 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain DYE50_RS07340 PF11974 Bacterial alpha-2-macroglobulin MG3 domain DYE50_RS07340 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain DYE50_RS07340 PF07703 Alpha-2-macroglobulin bait region domain DYE50_RS07340 PF01835 MG2 domain DYE50_RS07345 PF17151 Periplasmic sensor domain DYE50_RS07345 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS07370 PF01047 MarR family DYE50_RS07375 PF00589 Phage integrase family DYE50_RS07380 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_RS07380 PF00589 Phage integrase family DYE50_RS07385 PF00589 Phage integrase family DYE50_RS07385 PF02899 Phage integrase, N-terminal SAM-like domain DYE50_RS07395 PF00912 Transglycosylase DYE50_RS07395 PF00905 Penicillin binding protein transpeptidase domain DYE50_RS07395 PF17092 Penicillin-binding protein OB-like domain DYE50_RS07400 PF00579 tRNA synthetases class I (W and Y) DYE50_RS07405 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS07405 PF02861 Clp amino terminal domain, pathogenicity island component DYE50_RS07405 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_RS07405 PF17871 AAA lid domain DYE50_RS07405 PF07724 AAA domain (Cdc48 subfamily) DYE50_RS07410 PF18766 SWI2/SNF2 ATPase DYE50_RS07410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYE50_RS07410 PF11867 Domain of unknown function (DUF3387) DYE50_RS07415 PF02661 Fic/DOC family DYE50_RS07445 PF02384 N-6 DNA Methylase DYE50_RS07455 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS07460 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DYE50_RS07485 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DYE50_RS07485 PF12733 Cadherin-like beta sandwich domain DYE50_RS07500 PF00005 ABC transporter DYE50_RS07505 PF12704 MacB-like periplasmic core domain DYE50_RS07505 PF02687 FtsX-like permease family DYE50_RS07515 PF00448 SRP54-type protein, GTPase domain DYE50_RS07515 PF02881 SRP54-type protein, helical bundle domain DYE50_RS07545 PF00571 CBS domain DYE50_RS07545 PF03471 Transporter associated domain DYE50_RS07550 PF02130 Uncharacterized protein family UPF0054 DYE50_RS07555 PF07698 7TM receptor with intracellular HD hydrolase DYE50_RS07555 PF07697 7TM-HD extracellular DYE50_RS07555 PF01966 HD domain DYE50_RS07560 PF02562 PhoH-like protein DYE50_RS07575 PF00005 ABC transporter DYE50_RS07575 PF09383 NIL domain DYE50_RS07580 PF02405 Permease MlaE DYE50_RS07585 PF00483 Nucleotidyl transferase DYE50_RS07610 PF04545 Sigma-70, region 4 DYE50_RS07610 PF04539 Sigma-70 region 3 DYE50_RS07610 PF04542 Sigma-70 region 2 DYE50_RS07620 PF10609 NUBPL iron-transfer P-loop NTPase DYE50_RS07625 PF00448 SRP54-type protein, GTPase domain DYE50_RS07630 PF00771 FHIPEP family DYE50_RS07635 PF01312 FlhB HrpN YscU SpaS Family DYE50_RS07640 PF01311 Bacterial export proteins, family 1 DYE50_RS07645 PF01313 Bacterial export proteins, family 3 DYE50_RS07650 PF00813 FliP family DYE50_RS07660 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYE50_RS07665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYE50_RS07665 PF02154 Flagellar motor switch protein FliM DYE50_RS07670 PF03748 Flagellar basal body-associated protein FliL DYE50_RS07675 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYE50_RS07675 PF00691 OmpA family DYE50_RS07680 PF01618 MotA/TolQ/ExbB proton channel family DYE50_RS07685 PF06289 Flagellar and Swarming motility proteins DYE50_RS07690 PF04055 Radical SAM superfamily DYE50_RS07690 PF06969 HemN C-terminal domain DYE50_RS07695 PF10502 Signal peptidase, peptidase S26 DYE50_RS07700 PF01668 SmpB protein DYE50_RS07710 PF01300 Telomere recombination DYE50_RS07730 PF01973 Protein of unknown function DUF115 DYE50_RS07755 PF08264 Anticodon-binding domain of tRNA DYE50_RS07755 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_RS07760 PF01168 Alanine racemase, N-terminal domain DYE50_RS07770 PF00501 AMP-binding enzyme DYE50_RS07800 PF00448 SRP54-type protein, GTPase domain DYE50_RS07800 PF02881 SRP54-type protein, helical bundle domain DYE50_RS07800 PF02978 Signal peptide binding domain DYE50_RS07805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DYE50_RS07805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DYE50_RS07810 PF00334 Nucleoside diphosphate kinase DYE50_RS07815 PF02401 LytB protein DYE50_RS07820 PF00563 EAL domain DYE50_RS07820 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS07820 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS07825 PF02355 Protein export membrane protein DYE50_RS07830 PF02355 Protein export membrane protein DYE50_RS07835 PF02699 Preprotein translocase subunit DYE50_RS07855 PF01476 LysM domain DYE50_RS07855 PF01464 Transglycosylase SLT domain DYE50_RS07860 PF04972 BON domain DYE50_RS07860 PF00691 OmpA family DYE50_RS07870 PF00155 Aminotransferase class I and II DYE50_RS07875 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYE50_RS07885 PF00440 Bacterial regulatory proteins, tetR family DYE50_RS07915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYE50_RS07930 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS07965 PF00155 Aminotransferase class I and II DYE50_RS07980 PF01136 Peptidase family U32 DYE50_RS07980 PF12392 Collagenase DYE50_RS07990 PF02568 Thiamine biosynthesis protein (ThiI) DYE50_RS07990 PF02926 THUMP domain DYE50_RS08005 PF00534 Glycosyl transferases group 1 DYE50_RS08005 PF13439 Glycosyltransferase Family 4 DYE50_RS08010 PF00270 DEAD/DEAH box helicase DYE50_RS08010 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DYE50_RS08010 PF00271 Helicase conserved C-terminal domain DYE50_RS08010 PF17764 3′ DNA-binding domain (3′BD) DYE50_RS08010 PF18074 Primosomal protein N C-terminal domain DYE50_RS08015 PF03167 Uracil DNA glycosylase superfamily DYE50_RS08020 PF01416 tRNA pseudouridine synthase DYE50_RS08025 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) DYE50_RS08030 PF01648 4'-phosphopantetheinyl transferase superfamily DYE50_RS08040 PF02457 DisA bacterial checkpoint controller nucleotide-binding DYE50_RS08045 PF00809 Pterin binding enzyme DYE50_RS08050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYE50_RS08050 PF02779 Transketolase, pyrimidine binding domain DYE50_RS08050 PF02780 Transketolase, C-terminal domain DYE50_RS08065 PF01368 DHH family DYE50_RS08065 PF17768 RecJ OB domain DYE50_RS08065 PF02272 DHHA1 domain DYE50_RS08065 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DYE50_RS08070 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS08070 PF00563 EAL domain DYE50_RS08070 PF08447 PAS fold DYE50_RS08070 PF08448 PAS fold DYE50_RS08075 PF01048 Phosphorylase superfamily DYE50_RS08085 PF01791 DeoC/LacD family aldolase DYE50_RS08090 PF13187 4Fe-4S dicluster domain DYE50_RS08100 PF01464 Transglycosylase SLT domain DYE50_RS08100 PF10145 Phage-related minor tail protein DYE50_RS08100 PF01551 Peptidase family M23 DYE50_RS08110 PF00905 Penicillin binding protein transpeptidase domain DYE50_RS08110 PF17092 Penicillin-binding protein OB-like domain DYE50_RS08110 PF00912 Transglycosylase DYE50_RS08115 PF00580 UvrD/REP helicase N-terminal domain DYE50_RS08115 PF13361 UvrD-like helicase C-terminal domain DYE50_RS08120 PF00704 Glycosyl hydrolases family 18 DYE50_RS08150 PF00158 Sigma-54 interaction domain DYE50_RS08150 PF02954 Bacterial regulatory protein, Fis family DYE50_RS08150 PF13185 GAF domain DYE50_RS08155 PF00575 S1 RNA binding domain DYE50_RS08160 PF02224 Cytidylate kinase DYE50_RS08165 PF01479 S4 domain DYE50_RS08165 PF00849 RNA pseudouridylate synthase DYE50_RS08170 PF04079 Segregation and condensation complex subunit ScpB DYE50_RS08175 PF02616 Segregation and condensation protein ScpA DYE50_RS08180 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYE50_RS08185 PF00154 recA bacterial DNA recombination protein DYE50_RS08205 PF00834 Ribulose-phosphate 3 epimerase family DYE50_RS08240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYE50_RS08240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYE50_RS08250 PF00005 ABC transporter DYE50_RS08255 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS08265 PF17152 Periplasmic sensor domain DYE50_RS08265 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS08270 PF02195 ParB-like nuclease domain DYE50_RS08270 PF17762 HTH domain found in ParB protein DYE50_RS08275 PF13614 AAA domain DYE50_RS08285 PF02146 Sir2 family DYE50_RS08300 PF13276 HTH-like domain DYE50_RS08300 PF00665 Integrase core domain DYE50_RS08300 PF13333 Integrase core domain DYE50_RS08330 PF03129 Anticodon binding domain DYE50_RS08330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYE50_RS08340 PF01966 HD domain DYE50_RS08350 PF00905 Penicillin binding protein transpeptidase domain DYE50_RS08350 PF03717 Penicillin-binding Protein dimerisation domain DYE50_RS08355 PF10502 Signal peptidase, peptidase S26 DYE50_RS08360 PF10145 Phage-related minor tail protein DYE50_RS08360 PF01464 Transglycosylase SLT domain DYE50_RS08360 PF01551 Peptidase family M23 DYE50_RS08370 PF01522 Polysaccharide deacetylase DYE50_RS08375 PF00657 GDSL-like Lipase/Acylhydrolase DYE50_RS08380 PF01264 Chorismate synthase DYE50_RS08385 PF07943 Penicillin-binding protein 5, C-terminal domain DYE50_RS08385 PF00768 D-alanyl-D-alanine carboxypeptidase DYE50_RS08390 PF00698 Acyl transferase domain DYE50_RS08400 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_RS08400 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_RS08405 PF07977 FabA-like domain DYE50_RS08410 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_RS08415 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS08420 PF00005 ABC transporter DYE50_RS08425 PF00672 HAMP domain DYE50_RS08425 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS08440 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DYE50_RS08440 PF12733 Cadherin-like beta sandwich domain DYE50_RS08455 PF01728 FtsJ-like methyltransferase DYE50_RS08455 PF18125 RlmM ferredoxin-like domain DYE50_RS08460 PF04204 Homoserine O-succinyltransferase DYE50_RS08470 PF16325 Peptidase family U32 C-terminal domain DYE50_RS08470 PF01136 Peptidase family U32 DYE50_RS08485 PF04607 Region found in RelA / SpoT proteins DYE50_RS08485 PF02824 TGS domain DYE50_RS08485 PF13291 ACT domain DYE50_RS08520 PF00107 Zinc-binding dehydrogenase DYE50_RS08520 PF08240 Alcohol dehydrogenase GroES-like domain DYE50_RS08525 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_RS08525 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_RS08530 PF00465 Iron-containing alcohol dehydrogenase DYE50_RS08535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYE50_RS08540 PF01268 Formate--tetrahydrofolate ligase DYE50_RS08555 PF00892 EamA-like transporter family DYE50_RS08560 PF00849 RNA pseudouridylate synthase DYE50_RS08570 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYE50_RS08575 PF01960 ArgJ family DYE50_RS08580 PF00696 Amino acid kinase family DYE50_RS08585 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS08595 PF00155 Aminotransferase class I and II DYE50_RS08600 PF02872 5'-nucleotidase, C-terminal domain DYE50_RS08600 PF00149 Calcineurin-like phosphoesterase DYE50_RS08605 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_RS08610 PF02082 Transcriptional regulator DYE50_RS08615 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DYE50_RS08620 PF00793 DAHP synthetase I family DYE50_RS08620 PF18152 DAHP synthase ferredoxin-like domain DYE50_RS08625 PF00814 Glycoprotease family DYE50_RS08635 PF04542 Sigma-70 region 2 DYE50_RS08635 PF00140 Sigma-70 factor, region 1.2 DYE50_RS08635 PF03979 Sigma-70 factor, region 1.1 DYE50_RS08635 PF04545 Sigma-70, region 4 DYE50_RS08635 PF04539 Sigma-70 region 3 DYE50_RS08655 PF00849 RNA pseudouridylate synthase DYE50_RS08655 PF01479 S4 domain DYE50_RS08660 PF00285 Citrate synthase, C-terminal domain DYE50_RS08670 PF03590 Aspartate-ammonia ligase DYE50_RS08680 PF01063 Amino-transferase class IV DYE50_RS08685 PF00392 Bacterial regulatory proteins, gntR family DYE50_RS08685 PF07729 FCD domain DYE50_RS08695 PF03746 LamB/YcsF family DYE50_RS08705 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS08715 PF00005 ABC transporter DYE50_RS08715 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_RS08720 PF00005 ABC transporter DYE50_RS08725 PF02626 Carboxyltransferase domain, subdomain A and B DYE50_RS08730 PF07286 Protein of unknown function (DUF1445) DYE50_RS08735 PF00842 Alanine racemase, C-terminal domain DYE50_RS08735 PF01168 Alanine racemase, N-terminal domain DYE50_RS08740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYE50_RS08740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYE50_RS08745 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_RS08745 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_RS08745 PF14310 Fibronectin type III-like domain DYE50_RS08750 PF12833 Helix-turn-helix domain DYE50_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS08760 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS08780 PF00162 Phosphoglycerate kinase DYE50_RS08785 PF00121 Triosephosphate isomerase DYE50_RS08795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_RS08795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYE50_RS08810 PF01496 V-type ATPase 116kDa subunit family DYE50_RS08830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS08830 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_RS08830 PF16886 ATPsynthase alpha/beta subunit N-term extension DYE50_RS08835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS08835 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_RS08840 PF01813 ATP synthase subunit D DYE50_RS08845 PF00582 Universal stress protein family DYE50_RS08850 PF00356 Bacterial regulatory proteins, lacI family DYE50_RS08855 PF01547 Bacterial extracellular solute-binding protein DYE50_RS08860 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS08865 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS08870 PF00128 Alpha amylase, catalytic domain DYE50_RS08875 PF03633 Glycosyl hydrolase family 65, C-terminal domain DYE50_RS08875 PF03632 Glycosyl hydrolase family 65 central catalytic domain DYE50_RS08875 PF03636 Glycosyl hydrolase family 65, N-terminal domain DYE50_RS08880 PF00294 pfkB family carbohydrate kinase DYE50_RS08885 PF00696 Amino acid kinase family DYE50_RS08885 PF01842 ACT domain DYE50_RS08885 PF00742 Homoserine dehydrogenase DYE50_RS08885 PF13840 ACT domain DYE50_RS08885 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_RS08900 PF05173 Dihydrodipicolinate reductase, C-terminus DYE50_RS08900 PF01113 Dihydrodipicolinate reductase, N-terminus DYE50_RS08905 PF00156 Phosphoribosyl transferase domain DYE50_RS08910 PF02608 ABC transporter substrate-binding protein PnrA-like DYE50_RS08915 PF00072 Response regulator receiver domain DYE50_RS08920 PF00005 ABC transporter DYE50_RS08935 PF02915 Rubrerythrin DYE50_RS08940 PF01979 Amidohydrolase family DYE50_RS08940 PF13382 Adenine deaminase C-terminal domain DYE50_RS08950 PF02436 Conserved carboxylase domain DYE50_RS08950 PF00682 HMGL-like DYE50_RS08955 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DYE50_RS08975 PF02120 Flagellar hook-length control protein FliK DYE50_RS08980 PF03963 Flagellar hook capping protein - N-terminal region DYE50_RS08985 PF00460 Flagella basal body rod protein DYE50_RS08985 PF07559 Flagellar basal body protein FlaE DYE50_RS08985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_RS09000 PF03144 Elongation factor Tu domain 2 DYE50_RS09000 PF03764 Elongation factor G, domain IV DYE50_RS09000 PF14492 Elongation Factor G, domain II DYE50_RS09000 PF00679 Elongation factor G C-terminus DYE50_RS09000 PF00009 Elongation factor Tu GTP binding domain DYE50_RS09005 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS09005 PF07694 5TMR of 5TMR-LYT DYE50_RS09010 PF00563 EAL domain DYE50_RS09010 PF08447 PAS fold DYE50_RS09010 PF08448 PAS fold DYE50_RS09010 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS09015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DYE50_RS09015 PF00672 HAMP domain DYE50_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS09015 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS09015 PF01627 Hpt domain DYE50_RS09015 PF00072 Response regulator receiver domain DYE50_RS09020 PF00072 Response regulator receiver domain DYE50_RS09040 PF00005 ABC transporter DYE50_RS09040 PF17912 MalK OB fold domain DYE50_RS09040 PF03459 TOBE domain DYE50_RS09045 PF00773 RNB domain DYE50_RS09050 PF00684 DnaJ central domain DYE50_RS09050 PF01556 DnaJ C terminal domain DYE50_RS09050 PF00226 DnaJ domain DYE50_RS09055 PF00557 Metallopeptidase family M24 DYE50_RS09060 PF00595 PDZ domain DYE50_RS09065 PF00829 Ribosomal prokaryotic L21 protein DYE50_RS09075 PF01016 Ribosomal L27 protein DYE50_RS09080 PF01018 GTP1/OBG DYE50_RS09080 PF01926 50S ribosome-binding GTPase DYE50_RS09085 PF01467 Cytidylyltransferase-like DYE50_RS09110 PF00288 GHMP kinases N terminal domain DYE50_RS09110 PF08544 GHMP kinases C terminal DYE50_RS09115 PF04026 SpoVG DYE50_RS09125 PF14693 Ribosomal protein TL5, C-terminal domain DYE50_RS09125 PF01386 Ribosomal L25p family DYE50_RS09130 PF01171 PP-loop family DYE50_RS09140 PF13180 PDZ domain DYE50_RS09145 PF00679 Elongation factor G C-terminus DYE50_RS09145 PF06421 GTP-binding protein LepA C-terminus DYE50_RS09145 PF03144 Elongation factor Tu domain 2 DYE50_RS09145 PF00009 Elongation factor Tu GTP binding domain DYE50_RS09145 PF14492 Elongation Factor G, domain II DYE50_RS09150 PF01973 Protein of unknown function DUF115 DYE50_RS09160 PF02903 Alpha amylase, N-terminal ig-like domain DYE50_RS09160 PF00128 Alpha amylase, catalytic domain DYE50_RS09160 PF16657 Maltogenic Amylase, C-terminal domain DYE50_RS09165 PF12833 Helix-turn-helix domain DYE50_RS09165 PF02311 AraC-like ligand binding domain DYE50_RS09170 PF00128 Alpha amylase, catalytic domain DYE50_RS09175 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS09180 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS09185 PF01547 Bacterial extracellular solute-binding protein DYE50_RS09200 PF00128 Alpha amylase, catalytic domain DYE50_RS09200 PF03423 Carbohydrate binding domain (family 25) DYE50_RS09200 PF01373 Glycosyl hydrolase family 14 DYE50_RS09205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_RS09205 PF00128 Alpha amylase, catalytic domain DYE50_RS09205 PF03714 Bacterial pullanase-associated domain DYE50_RS09210 PF07470 Glycosyl Hydrolase Family 88 DYE50_RS09220 PF17239 Family of unknown function (DUF5312) DYE50_RS09225 PF00180 Isocitrate/isopropylmalate dehydrogenase DYE50_RS09230 PF01613 Flavin reductase like domain DYE50_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS09245 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS09250 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DYE50_RS09250 PF04616 Glycosyl hydrolases family 43 DYE50_RS09255 PF00356 Bacterial regulatory proteins, lacI family DYE50_RS09260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYE50_RS09260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYE50_RS09275 PF00156 Phosphoribosyl transferase domain DYE50_RS09280 PF01740 STAS domain DYE50_RS09280 PF00916 Sulfate permease family DYE50_RS09285 PF12706 Beta-lactamase superfamily domain DYE50_RS09285 PF00753 Metallo-beta-lactamase superfamily DYE50_RS09290 PF14572 Phosphoribosyl synthetase-associated domain DYE50_RS09290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYE50_RS09315 PF16314 Domain of unknown function (DUF4954) DYE50_RS09320 PF08502 LeuA allosteric (dimerisation) domain DYE50_RS09320 PF00682 HMGL-like DYE50_RS09340 PF00117 Glutamine amidotransferase class-I DYE50_RS09340 PF00958 GMP synthase C terminal domain DYE50_RS09340 PF02540 NAD synthase DYE50_RS09350 PF01336 OB-fold nucleic acid binding domain DYE50_RS09350 PF00152 tRNA synthetases class II (D, K and N) DYE50_RS09355 PF16868 NMT1-like family DYE50_RS09370 PF00348 Polyprenyl synthetase DYE50_RS09395 PF00753 Metallo-beta-lactamase superfamily DYE50_RS09405 PF01177 Asp/Glu/Hydantoin racemase DYE50_RS09410 PF00483 Nucleotidyl transferase DYE50_RS09410 PF01050 Mannose-6-phosphate isomerase DYE50_RS09415 PF02446 4-alpha-glucanotransferase DYE50_RS09420 PF02417 Chromate transporter DYE50_RS09430 PF01048 Phosphorylase superfamily DYE50_RS09435 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYE50_RS09435 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYE50_RS09440 PF00701 Dihydrodipicolinate synthetase family DYE50_RS09445 PF03744 6-carboxyhexanoate--CoA ligase DYE50_RS09455 PF00155 Aminotransferase class I and II DYE50_RS09460 PF00202 Aminotransferase class-III DYE50_RS09475 PF01238 Phosphomannose isomerase type I DYE50_RS09485 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS09485 PF00498 FHA domain DYE50_RS09485 PF00563 EAL domain DYE50_RS09490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_RS09490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYE50_RS09495 PF00575 S1 RNA binding domain DYE50_RS09500 PF00300 Histidine phosphatase superfamily (branch 1) DYE50_RS09545 PF00293 NUDIX domain DYE50_RS09545 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_RS09585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYE50_RS09590 PF01553 Acyltransferase DYE50_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS09600 PF00005 ABC transporter DYE50_RS09600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYE50_RS09605 PF14572 Phosphoribosyl synthetase-associated domain DYE50_RS09605 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYE50_RS09615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS09620 PF02743 Cache domain DYE50_RS09620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS09620 PF00672 HAMP domain DYE50_RS09625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS09640 PF01339 CheB methylesterase DYE50_RS09640 PF00072 Response regulator receiver domain DYE50_RS09645 PF03705 CheR methyltransferase, all-alpha domain DYE50_RS09645 PF01739 CheR methyltransferase, SAM binding domain DYE50_RS09650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS09650 PF01627 Hpt domain DYE50_RS09650 PF01584 CheW-like domain DYE50_RS09650 PF00072 Response regulator receiver domain DYE50_RS09650 PF02895 Signal transducing histidine kinase, homodimeric domain DYE50_RS09655 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS09660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYE50_RS09660 PF00005 ABC transporter DYE50_RS09670 PF03553 Na+/H+ antiporter family DYE50_RS09680 PF01479 S4 domain DYE50_RS09680 PF00849 RNA pseudouridylate synthase DYE50_RS09710 PF01740 STAS domain DYE50_RS09715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_RS09725 PF00550 Phosphopantetheine attachment site DYE50_RS09725 PF13193 AMP-binding enzyme C-terminal domain DYE50_RS09725 PF00668 Condensation domain DYE50_RS09725 PF00501 AMP-binding enzyme DYE50_RS09735 PF00886 Ribosomal protein S16 DYE50_RS09745 PF01782 RimM N-terminal domain DYE50_RS09750 PF01746 tRNA (Guanine-1)-methyltransferase DYE50_RS09755 PF01245 Ribosomal protein L19 DYE50_RS09765 PF01312 FlhB HrpN YscU SpaS Family DYE50_RS09775 PF02021 Uncharacterised protein family UPF0102 DYE50_RS09800 PF01026 TatD related DNase DYE50_RS09805 PF00342 Phosphoglucose isomerase DYE50_RS09810 PF01592 NifU-like N terminal domain DYE50_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS09815 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS09820 PF00486 Transcriptional regulatory protein, C terminal DYE50_RS09820 PF00072 Response regulator receiver domain DYE50_RS09825 PF00180 Isocitrate/isopropylmalate dehydrogenase DYE50_RS09835 PF00005 ABC transporter DYE50_RS09840 PF01458 Uncharacterized protein family (UPF0051) DYE50_RS09845 PF01458 Uncharacterized protein family (UPF0051) DYE50_RS09855 PF01761 3-dehydroquinate synthase DYE50_RS09865 PF02223 Thymidylate kinase DYE50_RS09875 PF01103 Surface antigen DYE50_RS09875 PF07244 Surface antigen variable number repeat DYE50_RS09885 PF00488 MutS domain V DYE50_RS09885 PF05188 MutS domain II DYE50_RS09885 PF05192 MutS domain III DYE50_RS09885 PF05190 MutS family domain IV DYE50_RS09885 PF01624 MutS domain I DYE50_RS09895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS09895 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_RS09900 PF01584 CheW-like domain DYE50_RS09910 PF01513 ATP-NAD kinase DYE50_RS09915 PF02463 RecF/RecN/SMC N terminal domain DYE50_RS09930 PF01476 LysM domain DYE50_RS09930 PF05257 CHAP domain DYE50_RS09945 PF03330 Lytic transglycolase DYE50_RS09945 PF05036 Sporulation related domain DYE50_RS09950 PF01966 HD domain DYE50_RS09950 PF00672 HAMP domain DYE50_RS09955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DYE50_RS09960 PF05164 Cell division protein ZapA DYE50_RS09970 PF00453 Ribosomal protein L20 DYE50_RS09975 PF01632 Ribosomal protein L35 DYE50_RS09980 PF05198 Translation initiation factor IF-3, N-terminal domain DYE50_RS09980 PF00707 Translation initiation factor IF-3, C-terminal domain DYE50_RS09985 PF01189 16S rRNA methyltransferase RsmB/F DYE50_RS09985 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYE50_RS09985 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYE50_RS09990 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_RS10000 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DYE50_RS10000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DYE50_RS10000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DYE50_RS10015 PF17755 UvrA DNA-binding domain DYE50_RS10015 PF00005 ABC transporter DYE50_RS10015 PF17760 UvrA interaction domain DYE50_RS10040 PF03193 RsgA GTPase DYE50_RS10045 PF00488 MutS domain V DYE50_RS10045 PF01713 Smr domain DYE50_RS10050 PF00485 Phosphoribulokinase / Uridine kinase family DYE50_RS10055 PF01316 Arginine repressor, DNA binding domain DYE50_RS10055 PF02863 Arginine repressor, C-terminal domain DYE50_RS10065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYE50_RS10065 PF18269 T3SS EscN ATPase C-terminal domain DYE50_RS10065 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYE50_RS10070 PF02108 Flagellar assembly protein FliH DYE50_RS10075 PF14841 FliG middle domain DYE50_RS10075 PF01706 FliG C-terminal domain DYE50_RS10075 PF14842 FliG N-terminal domain DYE50_RS10080 PF08345 Flagellar M-ring protein C-terminal DYE50_RS10080 PF01514 Secretory protein of YscJ/FliF family DYE50_RS10085 PF02049 Flagellar hook-basal body complex protein FliE DYE50_RS10090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYE50_RS10090 PF00460 Flagella basal body rod protein DYE50_RS10100 PF00005 ABC transporter DYE50_RS10105 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS10110 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_RS10115 PF14698 Argininosuccinate lyase C-terminal DYE50_RS10115 PF00206 Lyase DYE50_RS10120 PF00919 Uncharacterized protein family UPF0004 DYE50_RS10120 PF04055 Radical SAM superfamily DYE50_RS10150 PF07724 AAA domain (Cdc48 subfamily) DYE50_RS10150 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS10150 PF10431 C-terminal, D2-small domain, of ClpB protein DYE50_RS10150 PF02861 Clp amino terminal domain, pathogenicity island component DYE50_RS10150 PF17871 AAA lid domain DYE50_RS10155 PF01479 S4 domain DYE50_RS10155 PF00163 Ribosomal protein S4/S9 N-terminal domain DYE50_RS10160 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DYE50_RS10160 PF03480 Bacterial extracellular solute-binding protein, family 7 DYE50_RS10165 PF00929 Exonuclease DYE50_RS10170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYE50_RS10170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYE50_RS10170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYE50_RS10170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYE50_RS10175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYE50_RS10175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYE50_RS10175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYE50_RS10175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYE50_RS10185 PF03485 Arginyl tRNA synthetase N terminal domain DYE50_RS10185 PF05746 DALR anticodon binding domain DYE50_RS10185 PF00750 tRNA synthetases class I (R) DYE50_RS10190 PF12850 Calcineurin-like phosphoesterase superfamily domain DYE50_RS10200 PF04607 Region found in RelA / SpoT proteins DYE50_RS10205 PF00682 HMGL-like DYE50_RS10205 PF08502 LeuA allosteric (dimerisation) domain DYE50_RS10210 PF01242 6-pyruvoyl tetrahydropterin synthase DYE50_RS10215 PF00072 Response regulator receiver domain DYE50_RS10225 PF01584 CheW-like domain DYE50_RS10230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS10230 PF01584 CheW-like domain DYE50_RS10230 PF01627 Hpt domain DYE50_RS10230 PF07194 P2 response regulator binding domain DYE50_RS10230 PF02895 Signal transducing histidine kinase, homodimeric domain DYE50_RS10235 PF00551 Formyl transferase DYE50_RS10245 PF00586 AIR synthase related protein, N-terminal domain DYE50_RS10245 PF02769 AIR synthase related protein, C-terminal domain DYE50_RS10250 PF00156 Phosphoribosyl transferase domain DYE50_RS10255 PF00731 AIR carboxylase DYE50_RS10260 PF00293 NUDIX domain DYE50_RS10260 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_RS10275 PF02424 ApbE family DYE50_RS10285 PF02653 Branched-chain amino acid transport system / permease component DYE50_RS10290 PF00005 ABC transporter DYE50_RS10295 PF13407 Periplasmic binding protein domain DYE50_RS10300 PF13407 Periplasmic binding protein domain DYE50_RS10305 PF12833 Helix-turn-helix domain DYE50_RS10310 PF02743 Cache domain DYE50_RS10310 PF06580 Histidine kinase DYE50_RS10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS10310 PF00672 HAMP domain DYE50_RS10320 PF00830 Ribosomal L28 family DYE50_RS10350 PF02934 GatB/GatE catalytic domain DYE50_RS10350 PF02637 GatB domain DYE50_RS10365 PF02384 N-6 DNA Methylase DYE50_RS10380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYE50_RS10380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYE50_RS10385 PF01425 Amidase DYE50_RS10400 PF13361 UvrD-like helicase C-terminal domain DYE50_RS10400 PF00580 UvrD/REP helicase N-terminal domain DYE50_RS10405 PF00072 Response regulator receiver domain DYE50_RS10405 PF00211 Adenylate and Guanylate cyclase catalytic domain DYE50_RS10425 PF04055 Radical SAM superfamily DYE50_RS10425 PF00919 Uncharacterized protein family UPF0004 DYE50_RS10425 PF18693 TRAM domain DYE50_RS10440 PF17862 AAA+ lid domain DYE50_RS10440 PF01434 Peptidase family M41 DYE50_RS10440 PF00004 ATPase family associated with various cellular activities (AAA) DYE50_RS10445 PF02561 Flagellar protein FliS DYE50_RS10460 PF05736 OprF membrane domain DYE50_RS10460 PF00691 OmpA family DYE50_RS10485 PF01926 50S ribosome-binding GTPase DYE50_RS10485 PF13167 GTP-binding GTPase N-terminal DYE50_RS10485 PF16360 GTP-binding GTPase Middle Region DYE50_RS10500 PF08281 Sigma-70, region 4 DYE50_RS10500 PF04542 Sigma-70 region 2 DYE50_RS10510 PF01464 Transglycosylase SLT domain DYE50_RS10510 PF10145 Phage-related minor tail protein DYE50_RS10510 PF01551 Peptidase family M23 DYE50_RS10515 PF01728 FtsJ-like methyltransferase DYE50_RS10520 PF01966 HD domain DYE50_RS10520 PF00013 KH domain DYE50_RS10520 PF12072 Domain of unknown function (DUF3552) DYE50_RS10525 PF00005 ABC transporter DYE50_RS10525 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYE50_RS10540 PF01739 CheR methyltransferase, SAM binding domain DYE50_RS10540 PF03705 CheR methyltransferase, all-alpha domain DYE50_RS10545 PF00072 Response regulator receiver domain DYE50_RS10545 PF01339 CheB methylesterase DYE50_RS10550 PF07683 Cobalamin synthesis protein cobW C-terminal domain DYE50_RS10550 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYE50_RS10570 PF00005 ABC transporter DYE50_RS10585 PF13419 Haloacid dehalogenase-like hydrolase DYE50_RS10600 PF01381 Helix-turn-helix DYE50_RS10610 PF00204 DNA gyrase B DYE50_RS10610 PF00986 DNA gyrase B subunit, carboxyl terminus DYE50_RS10610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS10610 PF01751 Toprim domain DYE50_RS10615 PF00521 DNA gyrase/topoisomerase IV, subunit A DYE50_RS10620 PF00072 Response regulator receiver domain DYE50_RS10620 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS10625 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS10625 PF08448 PAS fold DYE50_RS10640 PF09186 Domain of unknown function (DUF1949) DYE50_RS10640 PF01205 Uncharacterized protein family UPF0029 DYE50_RS10655 PF00501 AMP-binding enzyme DYE50_RS10655 PF13193 AMP-binding enzyme C-terminal domain DYE50_RS10660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYE50_RS10660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYE50_RS10670 PF00206 Lyase DYE50_RS10670 PF10397 Adenylosuccinate lyase C-terminus DYE50_RS10675 PF00781 Diacylglycerol kinase catalytic domain DYE50_RS10690 PF02557 D-alanyl-D-alanine carboxypeptidase DYE50_RS10710 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DYE50_RS10715 PF01430 Hsp33 protein DYE50_RS10720 PF00464 Serine hydroxymethyltransferase DYE50_RS10740 PF01165 Ribosomal protein S21 DYE50_RS10750 PF07238 PilZ domain DYE50_RS10775 PF01565 FAD binding domain DYE50_RS10775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYE50_RS10780 PF09190 DALR domain DYE50_RS10780 PF01406 tRNA synthetases class I (C) catalytic domain DYE50_RS10795 PF01841 Transglutaminase-like superfamily DYE50_RS10800 PF00696 Amino acid kinase family DYE50_RS10815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DYE50_RS10815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DYE50_RS10830 PF02446 4-alpha-glucanotransferase DYE50_RS10840 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS10840 PF14821 Threonine synthase N terminus DYE50_RS10850 PF00109 Beta-ketoacyl synthase, N-terminal domain DYE50_RS10850 PF02801 Beta-ketoacyl synthase, C-terminal domain DYE50_RS10855 PF13416 Bacterial extracellular solute-binding protein DYE50_RS10860 PF01053 Cys/Met metabolism PLP-dependent enzyme DYE50_RS10865 PF01555 DNA methylase DYE50_RS10875 PF03600 Citrate transporter DYE50_RS10885 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYE50_RS10885 PF01676 Metalloenzyme superfamily DYE50_RS10890 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS10890 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS10890 PF00563 EAL domain DYE50_RS10905 PF04073 Aminoacyl-tRNA editing domain DYE50_RS10915 PF02142 MGS-like domain DYE50_RS10915 PF01808 AICARFT/IMPCHase bienzyme DYE50_RS10930 PF00005 ABC transporter DYE50_RS10935 PF12833 Helix-turn-helix domain DYE50_RS10935 PF02311 AraC-like ligand binding domain DYE50_RS10940 PF13419 Haloacid dehalogenase-like hydrolase DYE50_RS10945 PF01842 ACT domain DYE50_RS10945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYE50_RS10945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYE50_RS10950 PF00266 Aminotransferase class-V DYE50_RS10955 PF01228 Glycine radical DYE50_RS10955 PF02901 Pyruvate formate lyase-like DYE50_RS10960 PF04055 Radical SAM superfamily DYE50_RS10965 PF13407 Periplasmic binding protein domain DYE50_RS10970 PF02833 DHHA2 domain DYE50_RS10970 PF01368 DHH family DYE50_RS10975 PF08903 Domain of unknown function (DUF1846) DYE50_RS10980 PF00202 Aminotransferase class-III DYE50_RS10985 PF00291 Pyridoxal-phosphate dependent enzyme DYE50_RS10990 PF00005 ABC transporter DYE50_RS11010 PF00005 ABC transporter DYE50_RS11020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYE50_RS11020 PF02780 Transketolase, C-terminal domain DYE50_RS11020 PF02779 Transketolase, pyrimidine binding domain DYE50_RS11040 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_RS11050 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS11055 PF00005 ABC transporter DYE50_RS11065 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_RS11075 PF01202 Shikimate kinase DYE50_RS11085 PF01202 Shikimate kinase DYE50_RS11090 PF01202 Shikimate kinase DYE50_RS11100 PF00005 ABC transporter DYE50_RS11105 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS11115 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYE50_RS11120 PF03466 LysR substrate binding domain DYE50_RS11120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYE50_RS11125 PF00148 Nitrogenase component 1 type Oxidoreductase DYE50_RS11145 PF00255 Glutathione peroxidase DYE50_RS11155 PF00465 Iron-containing alcohol dehydrogenase DYE50_RS11160 PF09297 NADH pyrophosphatase zinc ribbon domain DYE50_RS11160 PF00293 NUDIX domain DYE50_RS11190 PF04055 Radical SAM superfamily DYE50_RS11190 PF02579 Dinitrogenase iron-molybdenum cofactor DYE50_RS11195 PF04055 Radical SAM superfamily DYE50_RS11195 PF06968 Biotin and Thiamin Synthesis associated domain DYE50_RS11200 PF01554 MatE DYE50_RS11220 PF01618 MotA/TolQ/ExbB proton channel family DYE50_RS11250 PF00156 Phosphoribosyl transferase domain DYE50_RS11255 PF01081 KDPG and KHG aldolase DYE50_RS11260 PF00933 Glycosyl hydrolase family 3 N terminal domain DYE50_RS11260 PF14310 Fibronectin type III-like domain DYE50_RS11260 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYE50_RS11290 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_RS11290 PF09334 tRNA synthetases class I (M) DYE50_RS11290 PF13603 Leucyl-tRNA synthetase, Domain 2 DYE50_RS11290 PF08264 Anticodon-binding domain of tRNA DYE50_RS11295 PF02743 Cache domain DYE50_RS11295 PF00672 HAMP domain DYE50_RS11295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYE50_RS11305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DYE50_RS11310 PF04002 RadC-like JAB domain DYE50_RS11320 PF00595 PDZ domain DYE50_RS11340 PF07228 Stage II sporulation protein E (SpoIIE) DYE50_RS11340 PF00672 HAMP domain DYE50_RS11360 PF00072 Response regulator receiver domain DYE50_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS11360 PF00512 His Kinase A (phospho-acceptor) domain DYE50_RS11360 PF09308 LuxQ, periplasmic DYE50_RS11365 PF08207 Elongation factor P (EF-P) KOW-like domain DYE50_RS11365 PF09285 Elongation factor P, C-terminal DYE50_RS11365 PF01132 Elongation factor P (EF-P) OB domain DYE50_RS11410 PF04851 Type III restriction enzyme, res subunit DYE50_RS11410 PF17757 UvrB interaction domain DYE50_RS11410 PF12344 Ultra-violet resistance protein B DYE50_RS11410 PF00271 Helicase conserved C-terminal domain DYE50_RS11410 PF02151 UvrB/uvrC motif DYE50_RS11435 PF12833 Helix-turn-helix domain DYE50_RS11455 PF16355 Domain of unknown function (DUF4982) DYE50_RS11455 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DYE50_RS11455 PF00703 Glycosyl hydrolases family 2 DYE50_RS11455 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DYE50_RS11455 PF02837 Glycosyl hydrolases family 2, sugar binding domain DYE50_RS11465 PF01842 ACT domain DYE50_RS11465 PF00696 Amino acid kinase family DYE50_RS11465 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_RS11465 PF00742 Homoserine dehydrogenase DYE50_RS11465 PF13840 ACT domain DYE50_RS11495 PF00793 DAHP synthetase I family DYE50_RS11495 PF18152 DAHP synthase ferredoxin-like domain DYE50_RS11500 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS11505 PF00553 Cellulose binding domain DYE50_RS11505 PF00150 Cellulase (glycosyl hydrolase family 5) DYE50_RS11510 PF00722 Glycosyl hydrolases family 16 DYE50_RS11520 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS11520 PF05230 MASE2 domain DYE50_RS11530 PF03714 Bacterial pullanase-associated domain DYE50_RS11530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DYE50_RS11530 PF00128 Alpha amylase, catalytic domain DYE50_RS11535 PF00128 Alpha amylase, catalytic domain DYE50_RS11545 PF01373 Glycosyl hydrolase family 14 DYE50_RS11545 PF03423 Carbohydrate binding domain (family 25) DYE50_RS11545 PF00128 Alpha amylase, catalytic domain DYE50_RS11555 PF10458 Valyl tRNA synthetase tRNA binding arm DYE50_RS11555 PF00133 tRNA synthetases class I (I, L, M and V) DYE50_RS11555 PF08264 Anticodon-binding domain of tRNA DYE50_RS11565 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS11565 PF00563 EAL domain DYE50_RS11565 PF03707 Bacterial signalling protein N terminal repeat DYE50_RS11570 PF00764 Arginosuccinate synthase DYE50_RS11575 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS11580 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS11585 PF03781 Sulfatase-modifying factor enzyme 1 DYE50_RS11595 PF00486 Transcriptional regulatory protein, C terminal DYE50_RS11595 PF00072 Response regulator receiver domain DYE50_RS11605 PF03668 P-loop ATPase protein family DYE50_RS11610 PF00171 Aldehyde dehydrogenase family DYE50_RS11610 PF00465 Iron-containing alcohol dehydrogenase DYE50_RS11625 PF01556 DnaJ C terminal domain DYE50_RS11625 PF00226 DnaJ domain DYE50_RS11625 PF00684 DnaJ central domain DYE50_RS11630 PF00012 Hsp70 protein DYE50_RS11635 PF01025 GrpE DYE50_RS11640 PF10369 Small subunit of acetolactate synthase DYE50_RS11655 PF01066 CDP-alcohol phosphatidyltransferase DYE50_RS11660 PF02666 Phosphatidylserine decarboxylase DYE50_RS11680 PF00665 Integrase core domain DYE50_RS11710 PF04002 RadC-like JAB domain DYE50_RS11715 PF03743 Bacterial conjugation TrbI-like protein DYE50_RS11735 PF00437 Type II/IV secretion system protein DYE50_RS11740 PF02534 Type IV secretory system Conjugative DNA transfer DYE50_RS11755 PF03135 CagE, TrbE, VirB family, component of type IV transporter system DYE50_RS11830 PF12167 Arm DNA-binding domain DYE50_RS11830 PF00589 Phage integrase family DYE50_RS11850 PF05973 Phage derived protein Gp49-like (DUF891) DYE50_RS11855 PF00589 Phage integrase family DYE50_RS11870 PF13195 Protein of unknown function (DUF4011) DYE50_RS11870 PF13086 AAA domain DYE50_RS11870 PF13195 Protein of unknown function (DUF4011) DYE50_RS11870 PF13086 AAA domain DYE50_RS11870 PF13087 AAA domain DYE50_RS11870 PF13087 AAA domain DYE50_RS11880 PF01638 HxlR-like helix-turn-helix DYE50_RS11890 PF08011 PD-(D/E)XK nuclease superfamily DYE50_RS11890 PF09820 Predicted AAA-ATPase DYE50_RS11910 PF00664 ABC transporter transmembrane region DYE50_RS11910 PF00005 ABC transporter DYE50_RS11915 PF00664 ABC transporter transmembrane region DYE50_RS11915 PF04954 Siderophore-interacting protein DYE50_RS11915 PF08021 Siderophore-interacting FAD-binding domain DYE50_RS11915 PF00005 ABC transporter DYE50_RS11920 PF00440 Bacterial regulatory proteins, tetR family DYE50_RS11925 PF00392 Bacterial regulatory proteins, gntR family DYE50_RS11925 PF07729 FCD domain DYE50_RS11930 PF00294 pfkB family carbohydrate kinase DYE50_RS11940 PF00578 AhpC/TSA family DYE50_RS11945 PF00920 Dehydratase family DYE50_RS11950 PF00701 Dihydrodipicolinate synthetase family DYE50_RS11965 PF01970 Tripartite tricarboxylate transporter TctA family DYE50_RS11985 PF01979 Amidohydrolase family DYE50_RS11995 PF00295 Glycosyl hydrolases family 28 DYE50_RS12000 PF06993 Protein of unknown function (DUF1304) DYE50_RS12005 PF01116 Fructose-bisphosphate aldolase class-II DYE50_RS12010 PF01418 Helix-turn-helix domain, rpiR family DYE50_RS12010 PF01380 SIS domain DYE50_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12025 PF00005 ABC transporter DYE50_RS12025 PF03459 TOBE domain DYE50_RS12025 PF17912 MalK OB fold domain DYE50_RS12035 PF00072 Response regulator receiver domain DYE50_RS12035 PF12833 Helix-turn-helix domain DYE50_RS12040 PF06580 Histidine kinase DYE50_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYE50_RS12040 PF00672 HAMP domain DYE50_RS12040 PF02743 Cache domain DYE50_RS12045 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS12065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYE50_RS12085 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DYE50_RS12105 PF01297 Zinc-uptake complex component A periplasmic DYE50_RS12105 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYE50_RS12110 PF00005 ABC transporter DYE50_RS12120 PF00890 FAD binding domain DYE50_RS12120 PF14537 Cytochrome c3 DYE50_RS12125 PF00990 Diguanylate cyclase, GGDEF domain DYE50_RS12140 PF00271 Helicase conserved C-terminal domain DYE50_RS12140 PF09369 Domain of unknown function (DUF1998) DYE50_RS12140 PF00270 DEAD/DEAH box helicase DYE50_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12155 PF13416 Bacterial extracellular solute-binding protein DYE50_RS12160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DYE50_RS12160 PF12833 Helix-turn-helix domain DYE50_RS12180 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12185 PF00528 Binding-protein-dependent transport system inner membrane component DYE50_RS12190 PF01547 Bacterial extracellular solute-binding protein DYE50_RS12195 PF00884 Sulfatase DYE50_RS12200 PF07470 Glycosyl Hydrolase Family 88 DYE50_RS12210 PF01636 Phosphotransferase enzyme family DYE50_RS12220 PF00258 Flavodoxin DYE50_RS12225 PF01797 Transposase IS200 like DYE50_RS12230 PF01797 Transposase IS200 like DYE50_RS12250 PF13229 Right handed beta helix region DYE50_RS12255 PF13344 Haloacid dehalogenase-like hydrolase DYE50_RS12265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DYE50_RS12265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DYE50_RS12270 PF03447 Homoserine dehydrogenase, NAD binding domain DYE50_RS12270 PF01958 Domain of unknown function DUF108 DYE50_RS12305 PF00155 Aminotransferase class I and II DYE50_RS12315 PF01171 PP-loop family DYE50_RS12320 PF05684 Protein of unknown function (DUF819) DYE50_RS12335 PF00403 Heavy-metal-associated domain DYE50_RS12340 PF16314 Domain of unknown function (DUF4954) DYE50_RS12345 PF01966 HD domain DYE50_RS12350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS12350 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DYE50_RS12375 PF09820 Predicted AAA-ATPase DYE50_RS12375 PF08011 PD-(D/E)XK nuclease superfamily DYE50_RS12380 PF01022 Bacterial regulatory protein, arsR family DYE50_RS12400 PF01554 MatE DYE50_RS12405 PF01554 MatE DYE50_RS12410 PF01554 MatE DYE50_RS12415 PF00696 Amino acid kinase family DYE50_RS12415 PF13840 ACT domain DYE50_RS12425 PF00005 ABC transporter DYE50_RS12425 PF17912 MalK OB fold domain DYE50_RS12425 PF03459 TOBE domain DYE50_RS12430 PF02664 S-Ribosylhomocysteinase (LuxS) DYE50_RS12435 PF01048 Phosphorylase superfamily DYE50_RS12450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DYE50_RS12450 PF03466 LysR substrate binding domain DYE50_RS12465 PF11798 IMS family HHH motif DYE50_RS12465 PF11799 impB/mucB/samB family C-terminal domain DYE50_RS12465 PF00817 impB/mucB/samB family DYE50_RS12485 PF00392 Bacterial regulatory proteins, gntR family DYE50_RS12485 PF07729 FCD domain DYE50_RS12490 PF01266 FAD dependent oxidoreductase DYE50_RS12495 PF04324 BFD-like [2Fe-2S] binding domain DYE50_RS12495 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYE50_RS12595 PF01554 MatE