locus-tag	class	description
E4O04_RS00005	PF00308	Bacterial dnaA  protein
E4O04_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
E4O04_RS00005	PF11638	DnaA N-terminal domain
E4O04_RS00010	PF00204	DNA gyrase B
E4O04_RS00010	PF00986	DNA gyrase B subunit, carboxyl terminus
E4O04_RS00010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS00010	PF01751	Toprim domain
E4O04_RS00025	PF00270	DEAD/DEAH box helicase
E4O04_RS00025	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
E4O04_RS00025	PF17191	RecG wedge domain
E4O04_RS00030	PF00664	ABC transporter transmembrane region
E4O04_RS00030	PF00005	ABC transporter
E4O04_RS00035	PF00005	ABC transporter
E4O04_RS00035	PF00664	ABC transporter transmembrane region
E4O04_RS00045	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E4O04_RS00045	PF03129	Anticodon binding domain
E4O04_RS00065	PF01915	Glycosyl hydrolase family 3 C-terminal domain
E4O04_RS00065	PF00933	Glycosyl hydrolase family 3 N terminal domain
E4O04_RS00105	PF01230	HIT domain
E4O04_RS00115	PF02801	Beta-ketoacyl synthase, C-terminal domain
E4O04_RS00115	PF00109	Beta-ketoacyl synthase, N-terminal domain
E4O04_RS00120	PF13193	AMP-binding enzyme C-terminal domain
E4O04_RS00120	PF00501	AMP-binding enzyme
E4O04_RS00125	PF02237	Biotin protein ligase C terminal domain
E4O04_RS00125	PF03099	Biotin/lipoate A/B protein ligase family
E4O04_RS00125	PF08279	HTH domain
E4O04_RS00130	PF01515	Phosphate acetyl/butaryl transferase
E4O04_RS00135	PF13176	Tetratricopeptide repeat
E4O04_RS00135	PF13174	Tetratricopeptide repeat
E4O04_RS00140	PF03960	ArsC family
E4O04_RS00145	PF12848	ABC transporter
E4O04_RS00145	PF00005	ABC transporter
E4O04_RS00155	PF01268	Formate--tetrahydrofolate ligase
E4O04_RS00160	PF00756	Putative esterase
E4O04_RS00160	PF01476	LysM domain
E4O04_RS00165	PF05343	M42 glutamyl aminopeptidase
E4O04_RS00180	PF13505	Outer membrane protein beta-barrel domain
E4O04_RS00185	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
E4O04_RS00185	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
E4O04_RS00190	PF10417	C-terminal domain of 1-Cys peroxiredoxin
E4O04_RS00190	PF00578	AhpC/TSA family
E4O04_RS00195	PF00210	Ferritin-like domain
E4O04_RS00200	PF00293	NUDIX domain
E4O04_RS00210	PF00403	Heavy-metal-associated domain
E4O04_RS00215	PF00176	SNF2 family N-terminal domain
E4O04_RS00215	PF00271	Helicase conserved C-terminal domain
E4O04_RS00215	PF12419	SNF2 Helicase protein 
E4O04_RS00220	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS00220	PF09820	Predicted AAA-ATPase
E4O04_RS00235	PF01979	Amidohydrolase family
E4O04_RS00275	PF01313	Bacterial export proteins, family 3
E4O04_RS00280	PF01311	Bacterial export proteins, family 1
E4O04_RS00285	PF01312	FlhB HrpN YscU SpaS Family
E4O04_RS00290	PF00771	FHIPEP family
E4O04_RS00295	PF01192	RNA polymerase Rpb6 
E4O04_RS00355	PF13635	Domain of unknown function (DUF4143)
E4O04_RS00355	PF13173	AAA domain
E4O04_RS00380	PF00365	Phosphofructokinase
E4O04_RS00395	PF00027	Cyclic nucleotide-binding domain
E4O04_RS00395	PF13545	Crp-like helix-turn-helix domain
E4O04_RS00400	PF07687	Peptidase dimerisation domain
E4O04_RS00400	PF01546	Peptidase family M20/M25/M40
E4O04_RS00410	PF04545	Sigma-70, region 4
E4O04_RS00410	PF04539	Sigma-70 region 3
E4O04_RS00410	PF03979	Sigma-70 factor, region 1.1
E4O04_RS00410	PF00140	Sigma-70 factor, region 1.2
E4O04_RS00410	PF04542	Sigma-70 region 2 
E4O04_RS00415	PF01136	Peptidase family U32
E4O04_RS00415	PF16325	Peptidase family U32 C-terminal domain
E4O04_RS00420	PF02743	Cache domain
E4O04_RS00420	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS00420	PF00672	HAMP domain
E4O04_RS00425	PF01687	Riboflavin kinase
E4O04_RS00425	PF06574	FAD synthetase
E4O04_RS00430	PF00324	Amino acid permease
E4O04_RS00435	PF00107	Zinc-binding dehydrogenase
E4O04_RS00435	PF08240	Alcohol dehydrogenase GroES-like domain
E4O04_RS00440	PF01791	DeoC/LacD family aldolase
E4O04_RS00445	PF09338	Glycine/sarcosine/betaine reductase component B subunits
E4O04_RS00460	PF00171	Aldehyde dehydrogenase family
E4O04_RS00475	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
E4O04_RS00475	PF01926	50S ribosome-binding GTPase
E4O04_RS00480	PF02896	PEP-utilising enzyme, TIM barrel domain
E4O04_RS00480	PF05524	PEP-utilising enzyme, N-terminal
E4O04_RS00480	PF00391	PEP-utilising enzyme, mobile domain
E4O04_RS00485	PF00580	UvrD/REP helicase N-terminal domain
E4O04_RS00485	PF13361	UvrD-like helicase C-terminal domain
E4O04_RS00485	PF12705	PD-(D/E)XK nuclease superfamily
E4O04_RS00490	PF12705	PD-(D/E)XK nuclease superfamily
E4O04_RS00495	PF02254	TrkA-N domain
E4O04_RS00495	PF02080	TrkA-C domain
E4O04_RS00500	PF02386	Cation transport protein
E4O04_RS00505	PF01841	Transglutaminase-like superfamily
E4O04_RS00520	PF01406	tRNA synthetases class I (C) catalytic domain
E4O04_RS00520	PF09190	DALR domain
E4O04_RS00525	PF01565	FAD binding domain 
E4O04_RS00525	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
E4O04_RS00535	PF13635	Domain of unknown function (DUF4143)
E4O04_RS00535	PF13173	AAA domain
E4O04_RS00540	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS00540	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E4O04_RS00545	PF00664	ABC transporter transmembrane region
E4O04_RS00545	PF00005	ABC transporter
E4O04_RS00545	PF03412	Peptidase C39 family
E4O04_RS00550	PF00664	ABC transporter transmembrane region
E4O04_RS00550	PF00005	ABC transporter
E4O04_RS00550	PF03412	Peptidase C39 family
E4O04_RS00555	PF12728	Helix-turn-helix domain
E4O04_RS00555	PF02661	Fic/DOC family
E4O04_RS00560	PF01555	DNA methylase
E4O04_RS00565	PF07676	WD40-like Beta Propeller Repeat
E4O04_RS00565	PF00326	Prolyl oligopeptidase family
E4O04_RS00590	PF00128	Alpha amylase, catalytic domain
E4O04_RS00590	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
E4O04_RS00600	PF00266	Aminotransferase class-V
E4O04_RS00605	PF01761	3-dehydroquinate synthase
E4O04_RS00610	PF01048	Phosphorylase superfamily
E4O04_RS00615	PF09820	Predicted AAA-ATPase
E4O04_RS00615	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS00635	PF00005	ABC transporter
E4O04_RS00640	PF12683	Protein of unknown function (DUF3798)
E4O04_RS00650	PF00128	Alpha amylase, catalytic domain
E4O04_RS00655	PF01409	tRNA synthetases class II core domain (F)
E4O04_RS00660	PF01551	Peptidase family M23
E4O04_RS00660	PF04225	Opacity-associated protein A LysM-like domain
E4O04_RS00670	PF03885	Protein of unknown function (DUF327)
E4O04_RS00675	PF04468	PSP1 C-terminal conserved region
E4O04_RS00690	PF03824	High-affinity nickel-transport protein
E4O04_RS00720	PF01207	Dihydrouridine synthase (Dus)
E4O04_RS00735	PF00072	Response regulator receiver domain
E4O04_RS00735	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS00750	PF08448	PAS fold
E4O04_RS00750	PF00563	EAL domain
E4O04_RS00750	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS00755	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
E4O04_RS00755	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
E4O04_RS00755	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
E4O04_RS00755	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
E4O04_RS00760	PF00005	ABC transporter
E4O04_RS00760	PF00664	ABC transporter transmembrane region
E4O04_RS00765	PF00005	ABC transporter
E4O04_RS00765	PF00664	ABC transporter transmembrane region
E4O04_RS00765	PF08021	Siderophore-interacting FAD-binding domain
E4O04_RS00765	PF04954	Siderophore-interacting protein
E4O04_RS00770	PF08361	MAATS-type transcriptional repressor, C-terminal region
E4O04_RS00770	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS00775	PF00375	Sodium:dicarboxylate symporter family
E4O04_RS00785	PF00392	Bacterial regulatory proteins, gntR family
E4O04_RS00785	PF07729	FCD domain
E4O04_RS00790	PF01266	FAD dependent oxidoreductase
E4O04_RS00795	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS00795	PF04324	BFD-like [2Fe-2S] binding domain
E4O04_RS00805	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E4O04_RS00805	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E4O04_RS00835	PF01547	Bacterial extracellular solute-binding protein
E4O04_RS00840	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS00845	PF08402	TOBE domain
E4O04_RS00845	PF00005	ABC transporter
E4O04_RS00860	PF01546	Peptidase family M20/M25/M40
E4O04_RS00860	PF07687	Peptidase dimerisation domain
E4O04_RS00865	PF07730	Histidine kinase
E4O04_RS00870	PF00196	Bacterial regulatory proteins, luxR family
E4O04_RS00870	PF00072	Response regulator receiver domain
E4O04_RS00880	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS00880	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E4O04_RS00885	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS00890	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS00890	PF00672	HAMP domain
E4O04_RS00940	PF00258	Flavodoxin
E4O04_RS00960	PF00005	ABC transporter
E4O04_RS00965	PF07702	UTRA domain
E4O04_RS00965	PF00392	Bacterial regulatory proteins, gntR family
E4O04_RS00970	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS00970	PF17202	Single cache domain 3
E4O04_RS00970	PF00672	HAMP domain
E4O04_RS00975	PF00149	Calcineurin-like phosphoesterase
E4O04_RS00975	PF12320	Type 5 capsule protein repressor C-terminal domain
E4O04_RS00980	PF13476	AAA domain
E4O04_RS00985	PF02673	Bacitracin resistance protein BacA
E4O04_RS00990	PF09397	Ftsk gamma domain
E4O04_RS00990	PF01580	FtsK/SpoIIIE family
E4O04_RS00990	PF17854	FtsK alpha domain
E4O04_RS00995	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
E4O04_RS00995	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
E4O04_RS00995	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
E4O04_RS01035	PF01470	Pyroglutamyl peptidase
E4O04_RS01055	PF00005	ABC transporter
E4O04_RS01055	PF08402	TOBE domain
E4O04_RS01060	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS01070	PF00672	HAMP domain
E4O04_RS01070	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS01080	PF00962	Adenosine/AMP deaminase
E4O04_RS01085	PF01925	Sulfite exporter TauE/SafE
E4O04_RS01090	PF00892	EamA-like transporter family
E4O04_RS01095	PF02661	Fic/DOC family
E4O04_RS01135	PF00664	ABC transporter transmembrane region
E4O04_RS01135	PF00005	ABC transporter
E4O04_RS01145	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E4O04_RS01160	PF00749	tRNA synthetases class I (E and Q), catalytic domain
E4O04_RS01175	PF02447	GntP family permease
E4O04_RS01180	PF02595	Glycerate kinase family
E4O04_RS01185	PF03600	Citrate transporter
E4O04_RS01190	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
E4O04_RS01190	PF12557	Cob(I)alamin adenosyltransferase N terminal 
E4O04_RS01210	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS01215	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS01220	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS01220	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS01225	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS01225	PF00005	ABC transporter
E4O04_RS01230	PF00005	ABC transporter
E4O04_RS01230	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS01245	PF07238	PilZ domain
E4O04_RS01285	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
E4O04_RS01285	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
E4O04_RS01295	PF16123	Hydroxyacylglutathione hydrolase C-terminus
E4O04_RS01295	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS01310	PF02661	Fic/DOC family
E4O04_RS01325	PF01850	PIN domain
E4O04_RS01360	PF02463	RecF/RecN/SMC N terminal domain
E4O04_RS01365	PF00712	DNA polymerase III beta subunit, N-terminal domain
E4O04_RS01365	PF02767	DNA polymerase III beta subunit, central domain
E4O04_RS01365	PF02768	DNA polymerase III beta subunit, C-terminal domain
E4O04_RS01370	PF01661	Macro domain
E4O04_RS01375	PF02661	Fic/DOC family
E4O04_RS01375	PF13784	Fic/DOC family N-terminal
E4O04_RS01385	PF00005	ABC transporter
E4O04_RS01390	PF00013	KH domain
E4O04_RS01390	PF12072	Domain of unknown function (DUF3552)
E4O04_RS01390	PF01966	HD domain
E4O04_RS01400	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS01405	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS01410	PF00005	ABC transporter
E4O04_RS01410	PF03459	TOBE domain
E4O04_RS01410	PF17912	MalK OB fold domain
E4O04_RS01420	PF02504	Fatty acid synthesis protein
E4O04_RS01425	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
E4O04_RS01475	PF00664	ABC transporter transmembrane region
E4O04_RS01475	PF00005	ABC transporter
E4O04_RS01480	PF00664	ABC transporter transmembrane region
E4O04_RS01480	PF00005	ABC transporter
E4O04_RS01505	PF13411	MerR HTH family regulatory protein
E4O04_RS01510	PF00106	short chain dehydrogenase
E4O04_RS01525	PF00209	Sodium:neurotransmitter symporter family
E4O04_RS01530	PF01212	Beta-eliminating lyase
E4O04_RS01535	PF02743	Cache domain
E4O04_RS01535	PF00672	HAMP domain
E4O04_RS01535	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS01540	PF03601	Conserved hypothetical protein 698
E4O04_RS01545	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
E4O04_RS01550	PF01594	AI-2E family transporter
E4O04_RS01555	PF00268	Ribonucleotide reductase, small chain
E4O04_RS01560	PF04542	Sigma-70 region 2 
E4O04_RS01560	PF08281	Sigma-70, region 4
E4O04_RS01580	PF01554	MatE
E4O04_RS01585	PF17922	Tetracyclin repressor-like, C-terminal domain
E4O04_RS01585	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS01595	PF09827	CRISPR associated protein Cas2
E4O04_RS01600	PF01867	CRISPR associated protein Cas1
E4O04_RS01605	PF16593	Bridge helix of CRISPR-associated endonuclease Cas9
E4O04_RS01605	PF16595	PAM-interacting domain of CRISPR-associated endonuclease Cas9
E4O04_RS01605	PF16592	REC lobe of CRISPR-associated endonuclease Cas9
E4O04_RS01605	PF13395	HNH endonuclease
E4O04_RS01610	PF00570	HRDC domain
E4O04_RS01610	PF16124	RecQ zinc-binding
E4O04_RS01610	PF09382	RQC domain
E4O04_RS01610	PF00271	Helicase conserved C-terminal domain
E4O04_RS01610	PF00270	DEAD/DEAH box helicase
E4O04_RS01635	PF00571	CBS domain
E4O04_RS01635	PF03471	Transporter associated domain
E4O04_RS01635	PF01595	Cyclin M transmembrane N-terminal domain
E4O04_RS01640	PF00571	CBS domain
E4O04_RS01640	PF03471	Transporter associated domain
E4O04_RS01640	PF01595	Cyclin M transmembrane N-terminal domain
E4O04_RS01645	PF17863	AAA lid domain
E4O04_RS01645	PF07726	ATPase family associated with various cellular activities (AAA)
E4O04_RS01655	PF02080	TrkA-C domain
E4O04_RS01655	PF02254	TrkA-N domain
E4O04_RS01660	PF02386	Cation transport protein
E4O04_RS01665	PF02511	Thymidylate synthase complementing protein
E4O04_RS01710	PF09383	NIL domain
E4O04_RS01710	PF00005	ABC transporter
E4O04_RS01725	PF01343	Peptidase family S49
E4O04_RS01730	PF01926	50S ribosome-binding GTPase
E4O04_RS01730	PF06071	Protein of unknown function (DUF933)
E4O04_RS01745	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
E4O04_RS01755	PF03575	Peptidase family S51
E4O04_RS01765	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS01770	PF01609	Transposase DDE domain
E4O04_RS01770	PF05598	Transposase domain (DUF772)
E4O04_RS01780	PF02789	Cytosol aminopeptidase family, N-terminal domain
E4O04_RS01780	PF00883	Cytosol aminopeptidase family, catalytic domain
E4O04_RS01795	PF02971	Formiminotransferase domain
E4O04_RS01795	PF07837	Formiminotransferase domain, N-terminal subdomain
E4O04_RS01805	PF03989	DNA gyrase C-terminal domain, beta-propeller
E4O04_RS01805	PF00521	DNA gyrase/topoisomerase IV, subunit A
E4O04_RS01810	PF02080	TrkA-C domain
E4O04_RS01810	PF02254	TrkA-N domain
E4O04_RS01820	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
E4O04_RS01845	PF00005	ABC transporter
E4O04_RS01855	PF00072	Response regulator receiver domain
E4O04_RS01855	PF00486	Transcriptional regulatory protein, C terminal
E4O04_RS01865	PF00664	ABC transporter transmembrane region
E4O04_RS01865	PF00005	ABC transporter
E4O04_RS01865	PF03412	Peptidase C39 family
E4O04_RS01870	PF00005	ABC transporter
E4O04_RS01870	PF00664	ABC transporter transmembrane region
E4O04_RS01875	PF03144	Elongation factor Tu domain 2
E4O04_RS01875	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS01875	PF03764	Elongation factor G, domain IV
E4O04_RS01875	PF14492	Elongation Factor G, domain II
E4O04_RS01875	PF00679	Elongation factor G C-terminus
E4O04_RS01885	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
E4O04_RS01890	PF01850	PIN domain
E4O04_RS01895	PF00274	Fructose-bisphosphate aldolase class-I
E4O04_RS01900	PF03477	ATP cone domain
E4O04_RS01900	PF00317	Ribonucleotide reductase, all-alpha domain
E4O04_RS01900	PF02867	Ribonucleotide reductase, barrel domain
E4O04_RS01905	PF02743	Cache domain
E4O04_RS01905	PF00672	HAMP domain
E4O04_RS01905	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS01915	PF03616	Sodium/glutamate symporter
E4O04_RS01920	PF03023	Lipid II flippase MurJ
E4O04_RS01935	PF00005	ABC transporter
E4O04_RS01935	PF00664	ABC transporter transmembrane region
E4O04_RS01945	PF08245	Mur ligase middle domain
E4O04_RS01945	PF02875	Mur ligase family, glutamate ligase domain
E4O04_RS01950	PF03577	Peptidase family C69
E4O04_RS01960	PF00005	ABC transporter
E4O04_RS01960	PF00664	ABC transporter transmembrane region
E4O04_RS01960	PF03412	Peptidase C39 family
E4O04_RS01965	PF00005	ABC transporter
E4O04_RS01965	PF00664	ABC transporter transmembrane region
E4O04_RS01980	PF00005	ABC transporter
E4O04_RS02000	PF02492	CobW/HypB/UreG, nucleotide-binding domain
E4O04_RS02000	PF07683	Cobalamin synthesis protein cobW C-terminal domain
E4O04_RS02005	PF08240	Alcohol dehydrogenase GroES-like domain
E4O04_RS02005	PF00107	Zinc-binding dehydrogenase
E4O04_RS02010	PF00005	ABC transporter
E4O04_RS02010	PF17912	MalK OB fold domain
E4O04_RS02015	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS02020	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS02025	PF13416	Bacterial extracellular solute-binding protein
E4O04_RS02035	PF01869	BadF/BadG/BcrA/BcrD ATPase family
E4O04_RS02045	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component 
E4O04_RS02065	PF06050	2-hydroxyglutaryl-CoA dehydratase, D-component 
E4O04_RS02070	PF03466	LysR substrate binding domain
E4O04_RS02070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
E4O04_RS02075	PF02743	Cache domain
E4O04_RS02075	PF00672	HAMP domain
E4O04_RS02075	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS02095	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS02095	PF09820	Predicted AAA-ATPase
E4O04_RS02100	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS02100	PF09820	Predicted AAA-ATPase
E4O04_RS02105	PF09820	Predicted AAA-ATPase
E4O04_RS02105	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS02110	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS02110	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
E4O04_RS02115	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
E4O04_RS02115	PF00970	Oxidoreductase FAD-binding domain
E4O04_RS02115	PF00175	Oxidoreductase NAD-binding domain 
E4O04_RS02125	PF01435	Peptidase family M48
E4O04_RS02130	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS02130	PF00672	HAMP domain
E4O04_RS02130	PF02743	Cache domain
E4O04_RS02185	PF00664	ABC transporter transmembrane region
E4O04_RS02185	PF00005	ABC transporter
E4O04_RS02185	PF03412	Peptidase C39 family
E4O04_RS02200	PF02915	Rubrerythrin
E4O04_RS02205	PF16124	RecQ zinc-binding
E4O04_RS02205	PF00570	HRDC domain
E4O04_RS02205	PF00271	Helicase conserved C-terminal domain
E4O04_RS02205	PF09382	RQC domain
E4O04_RS02205	PF00270	DEAD/DEAH box helicase
E4O04_RS02210	PF02565	Recombination protein O C terminal
E4O04_RS02210	PF11967	Recombination protein O N terminal
E4O04_RS02220	PF01702	Queuine tRNA-ribosyltransferase
E4O04_RS02225	PF00005	ABC transporter
E4O04_RS02230	PF00005	ABC transporter
E4O04_RS02235	PF00069	Protein kinase domain
E4O04_RS02270	PF00005	ABC transporter
E4O04_RS02280	PF07722	Peptidase C26
E4O04_RS02285	PF13520	Amino acid permease
E4O04_RS02300	PF01791	DeoC/LacD family aldolase
E4O04_RS02305	PF00210	Ferritin-like domain
E4O04_RS02310	PF07687	Peptidase dimerisation domain
E4O04_RS02310	PF01546	Peptidase family M20/M25/M40
E4O04_RS02330	PF01171	PP-loop family
E4O04_RS02335	PF10509	Galactokinase galactose-binding signature
E4O04_RS02335	PF08544	GHMP kinases C terminal 
E4O04_RS02335	PF00288	GHMP kinases N terminal domain
E4O04_RS02340	PF01680	SOR/SNZ family
E4O04_RS02350	PF12671	Putative amidase domain
E4O04_RS02355	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS02355	PF00672	HAMP domain
E4O04_RS02355	PF02743	Cache domain
E4O04_RS02360	PF01595	Cyclin M transmembrane N-terminal domain
E4O04_RS02360	PF00571	CBS domain
E4O04_RS02360	PF03471	Transporter associated domain
E4O04_RS02365	PF01048	Phosphorylase superfamily
E4O04_RS02390	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS02390	PF01434	Peptidase family M41
E4O04_RS02390	PF17862	AAA+ lid domain
E4O04_RS02420	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS02440	PF02687	FtsX-like permease family
E4O04_RS02440	PF00005	ABC transporter
E4O04_RS02440	PF12704	MacB-like periplasmic core domain
E4O04_RS02445	PF02492	CobW/HypB/UreG, nucleotide-binding domain
E4O04_RS02460	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS02460	PF09820	Predicted AAA-ATPase
E4O04_RS02470	PF00672	HAMP domain
E4O04_RS02470	PF02743	Cache domain
E4O04_RS02470	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS02485	PF00005	ABC transporter
E4O04_RS02490	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
E4O04_RS02590	PF05598	Transposase domain (DUF772)
E4O04_RS02590	PF01609	Transposase DDE domain
E4O04_RS02605	PF00005	ABC transporter
E4O04_RS02605	PF00664	ABC transporter transmembrane region
E4O04_RS02610	PF00664	ABC transporter transmembrane region
E4O04_RS02610	PF00005	ABC transporter
E4O04_RS02615	PF00005	ABC transporter
E4O04_RS02630	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS02630	PF17932	Tetracyclin repressor-like, C-terminal domain
E4O04_RS02780	PF02637	GatB domain
E4O04_RS02780	PF02934	GatB/GatE catalytic domain
E4O04_RS02785	PF01425	Amidase
E4O04_RS02825	PF07726	ATPase family associated with various cellular activities (AAA)
E4O04_RS02825	PF17863	AAA lid domain
E4O04_RS02830	PF09323	Domain of unknown function (DUF1980)
E4O04_RS02835	PF03773	Predicted permease
E4O04_RS02850	PF00221	Aromatic amino acid lyase
E4O04_RS02855	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
E4O04_RS02860	PF01039	Carboxyl transferase domain
E4O04_RS02865	PF02785	Biotin carboxylase C-terminal domain
E4O04_RS02865	PF00289	Biotin carboxylase, N-terminal domain
E4O04_RS02865	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
E4O04_RS02870	PF00364	Biotin-requiring enzyme
E4O04_RS02875	PF00270	DEAD/DEAH box helicase
E4O04_RS02875	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
E4O04_RS02875	PF17191	RecG wedge domain
E4O04_RS02885	PF12242	NAD(P)H binding domain of trans-2-enoyl-CoA reductase
E4O04_RS02885	PF07055	Enoyl reductase FAD binding domain
E4O04_RS02885	PF12241	Trans-2-enoyl-CoA reductase catalytic region
E4O04_RS02890	PF01555	DNA methylase
E4O04_RS02905	PF00698	Acyl transferase domain
E4O04_RS02910	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
E4O04_RS02910	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
E4O04_RS02930	PF17762	HTH domain found in ParB protein
E4O04_RS02930	PF02195	ParB-like nuclease domain
E4O04_RS02935	PF13614	AAA domain
E4O04_RS02945	PF16326	ABC transporter C-terminal domain
E4O04_RS02945	PF00005	ABC transporter
E4O04_RS02945	PF12848	ABC transporter
E4O04_RS02950	PF00664	ABC transporter transmembrane region
E4O04_RS02950	PF00005	ABC transporter
E4O04_RS02955	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E4O04_RS02960	PF11760	Cobalamin synthesis G N-terminal
E4O04_RS02960	PF01890	Cobalamin synthesis G C-terminus
E4O04_RS02960	PF11761	Cobalamin biosynthesis central region
E4O04_RS02980	PF01554	MatE
E4O04_RS02990	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS02990	PF09820	Predicted AAA-ATPase
E4O04_RS02995	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E4O04_RS02995	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
E4O04_RS03000	PF02571	Precorrin-6x reductase CbiJ/CobK
E4O04_RS03005	PF00005	ABC transporter
E4O04_RS03015	PF12728	Helix-turn-helix domain
E4O04_RS03015	PF02661	Fic/DOC family
E4O04_RS03020	PF01025	GrpE
E4O04_RS03025	PF00012	Hsp70 protein
E4O04_RS03030	PF00226	DnaJ domain
E4O04_RS03030	PF00684	DnaJ central domain
E4O04_RS03030	PF01556	DnaJ C terminal domain
E4O04_RS03050	PF02557	D-alanyl-D-alanine carboxypeptidase
E4O04_RS03055	PF01545	Cation efflux family
E4O04_RS03055	PF16916	Dimerisation domain of Zinc Transporter
E4O04_RS03060	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS03060	PF00005	ABC transporter
E4O04_RS03065	PF00005	ABC transporter
E4O04_RS03065	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS03070	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS03070	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS03075	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS03080	PF02743	Cache domain
E4O04_RS03080	PF00672	HAMP domain
E4O04_RS03080	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS03085	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
E4O04_RS03095	PF01195	Peptidyl-tRNA hydrolase
E4O04_RS03100	PF00005	ABC transporter
E4O04_RS03100	PF12399	Branched-chain amino acid ATP-binding cassette transporter
E4O04_RS03115	PF01739	CheR methyltransferase, SAM binding domain
E4O04_RS03115	PF03705	CheR methyltransferase, all-alpha domain
E4O04_RS03120	PF01339	CheB methylesterase
E4O04_RS03120	PF00072	Response regulator receiver domain
E4O04_RS03140	PF03030	Inorganic H+ pyrophosphatase
E4O04_RS03145	PF00072	Response regulator receiver domain
E4O04_RS03145	PF00486	Transcriptional regulatory protein, C terminal
E4O04_RS03150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS03155	PF00005	ABC transporter
E4O04_RS03170	PF08279	HTH domain
E4O04_RS03170	PF13280	WYL domain
E4O04_RS03185	PF00691	OmpA family
E4O04_RS03195	PF01751	Toprim domain
E4O04_RS03195	PF01131	DNA topoisomerase
E4O04_RS03205	PF02534	Type IV secretory system Conjugative DNA transfer
E4O04_RS03215	PF00437	Type II/IV secretion system protein
E4O04_RS03240	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
E4O04_RS03265	PF03743	Bacterial conjugation TrbI-like protein 
E4O04_RS03315	PF00176	SNF2 family N-terminal domain
E4O04_RS03315	PF00271	Helicase conserved C-terminal domain
E4O04_RS03315	PF04434	SWIM zinc finger
E4O04_RS03330	PF04002	RadC-like JAB domain
E4O04_RS03370	PF01555	DNA methylase
E4O04_RS03375	PF00436	Single-strand binding protein family
E4O04_RS03430	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
E4O04_RS03430	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
E4O04_RS03430	PF10371	Domain of unknown function
E4O04_RS03430	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
E4O04_RS03430	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
E4O04_RS03455	PF06418	CTP synthase N-terminus
E4O04_RS03455	PF00117	Glutamine amidotransferase class-I
E4O04_RS03460	PF00155	Aminotransferase class I and II
E4O04_RS03465	PF00448	SRP54-type protein, GTPase domain
E4O04_RS03470	PF10609	NUBPL iron-transfer P-loop NTPase
E4O04_RS03480	PF04539	Sigma-70 region 3
E4O04_RS03480	PF04542	Sigma-70 region 2 
E4O04_RS03480	PF04545	Sigma-70, region 4
E4O04_RS03510	PF14821	Threonine synthase N terminus
E4O04_RS03510	PF00291	Pyridoxal-phosphate dependent enzyme
E4O04_RS03540	PF00953	Glycosyl transferase family 4
E4O04_RS03545	PF01066	CDP-alcohol phosphatidyltransferase
E4O04_RS03550	PF00464	Serine hydroxymethyltransferase
E4O04_RS03565	PF00478	IMP dehydrogenase / GMP reductase domain
E4O04_RS03565	PF00571	CBS domain
E4O04_RS03570	PF00133	tRNA synthetases class I (I, L, M and V)
E4O04_RS03570	PF08264	Anticodon-binding domain of tRNA
E4O04_RS03590	PF11849	Domain of unknown function (DUF3369)
E4O04_RS03595	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
E4O04_RS03595	PF07685	CobB/CobQ-like glutamine amidotransferase domain
E4O04_RS03600	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E4O04_RS03605	PF06180	Cobalt chelatase (CbiK)
E4O04_RS03615	PF00392	Bacterial regulatory proteins, gntR family
E4O04_RS03615	PF07702	UTRA domain
E4O04_RS03620	PF00005	ABC transporter
E4O04_RS03630	PF00571	CBS domain
E4O04_RS03630	PF00005	ABC transporter
E4O04_RS03640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS03640	PF04324	BFD-like [2Fe-2S] binding domain
E4O04_RS03645	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
E4O04_RS03645	PF01266	FAD dependent oxidoreductase
E4O04_RS03655	PF02661	Fic/DOC family
E4O04_RS03655	PF12728	Helix-turn-helix domain
E4O04_RS03665	PF01432	Peptidase family M3
E4O04_RS03665	PF08439	Oligopeptidase F
E4O04_RS03685	PF05958	tRNA (Uracil-5-)-methyltransferase
E4O04_RS03690	PF02811	PHP domain
E4O04_RS03700	PF13545	Crp-like helix-turn-helix domain
E4O04_RS03700	PF00027	Cyclic nucleotide-binding domain
E4O04_RS03705	PF01252	Signal peptidase (SPase) II
E4O04_RS03710	PF02424	ApbE family
E4O04_RS03730	PF00919	Uncharacterized protein family UPF0004
E4O04_RS03730	PF18693	TRAM domain
E4O04_RS03730	PF04055	Radical SAM superfamily
E4O04_RS03745	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS03745	PF00672	HAMP domain
E4O04_RS03745	PF02743	Cache domain
E4O04_RS03750	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS03750	PF00672	HAMP domain
E4O04_RS03750	PF02743	Cache domain
E4O04_RS03760	PF17391	Urocanase N-terminal domain
E4O04_RS03760	PF01175	Urocanase Rossmann-like domain
E4O04_RS03760	PF17392	Urocanase C-terminal domain
E4O04_RS03765	PF01906	Putative heavy-metal-binding
E4O04_RS03770	PF07670	Nucleoside recognition
E4O04_RS03780	PF13635	Domain of unknown function (DUF4143)
E4O04_RS03780	PF13173	AAA domain
E4O04_RS03795	PF01624	MutS domain I
E4O04_RS03795	PF00488	MutS domain V
E4O04_RS03795	PF05190	MutS family domain IV
E4O04_RS03795	PF05192	MutS domain III
E4O04_RS03795	PF05188	MutS domain II
E4O04_RS03805	PF01103	Surface antigen
E4O04_RS03805	PF07244	Surface antigen variable number repeat
E4O04_RS03815	PF02223	Thymidylate kinase
E4O04_RS03825	PF00834	Ribulose-phosphate 3 epimerase family
E4O04_RS03845	PF06505	Activator of aromatic catabolism
E4O04_RS03845	PF02830	V4R domain
E4O04_RS03845	PF00158	Sigma-54 interaction domain
E4O04_RS03845	PF02954	Bacterial regulatory protein, Fis family
E4O04_RS03850	PF03880	DbpA RNA binding domain   
E4O04_RS03860	PF02127	Aminopeptidase I zinc metalloprotease (M18)
E4O04_RS03875	PF12169	DNA polymerase III subunits gamma and tau domain III
E4O04_RS03880	PF12729	Four helix bundle sensory module for signal transduction
E4O04_RS03880	PF00672	HAMP domain
E4O04_RS03880	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS03885	PF03577	Peptidase family C69
E4O04_RS03900	PF00072	Response regulator receiver domain
E4O04_RS03900	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS03905	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS03910	PF00270	DEAD/DEAH box helicase
E4O04_RS03910	PF17191	RecG wedge domain
E4O04_RS03910	PF00271	Helicase conserved C-terminal domain
E4O04_RS03930	PF00849	RNA pseudouridylate synthase
E4O04_RS03940	PF01926	50S ribosome-binding GTPase
E4O04_RS03945	PF00342	Phosphoglucose isomerase
E4O04_RS03955	PF01066	CDP-alcohol phosphatidyltransferase
E4O04_RS03960	PF02229	Transcriptional Coactivator p15 (PC4)
E4O04_RS03965	PF00075	RNase H
E4O04_RS03970	PF00793	DAHP synthetase I family
E4O04_RS03975	PF02568	Thiamine biosynthesis protein (ThiI)
E4O04_RS03975	PF02926	THUMP domain
E4O04_RS03995	PF06769	YoeB-like toxin of bacterial type II toxin-antitoxin system
E4O04_RS04005	PF00950	ABC 3 transport family
E4O04_RS04010	PF00005	ABC transporter
E4O04_RS04025	PF00664	ABC transporter transmembrane region
E4O04_RS04025	PF00005	ABC transporter
E4O04_RS04030	PF00664	ABC transporter transmembrane region
E4O04_RS04030	PF00005	ABC transporter
E4O04_RS04035	PF09820	Predicted AAA-ATPase
E4O04_RS04035	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04040	PF02570	Precorrin-8X methylmutase
E4O04_RS04045	PF01430	Hsp33 protein
E4O04_RS04050	PF01921	tRNA synthetases class I (K)
E4O04_RS04065	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
E4O04_RS04065	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
E4O04_RS04105	PF00224	Pyruvate kinase, barrel domain
E4O04_RS04105	PF00391	PEP-utilising enzyme, mobile domain
E4O04_RS04105	PF02887	Pyruvate kinase, alpha/beta domain
E4O04_RS04110	PF00730	HhH-GPD superfamily base excision DNA repair protein
E4O04_RS04135	PF04055	Radical SAM superfamily
E4O04_RS04165	PF01973	Protein of unknown function DUF115
E4O04_RS04170	PF00005	ABC transporter
E4O04_RS04175	PF00005	ABC transporter
E4O04_RS04175	PF00664	ABC transporter transmembrane region
E4O04_RS04195	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04195	PF09820	Predicted AAA-ATPase
E4O04_RS04200	PF18073	Rubredoxin metal binding domain
E4O04_RS04200	PF06745	KaiC
E4O04_RS04225	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS04235	PF02527	rRNA small subunit methyltransferase G
E4O04_RS04240	PF00171	Aldehyde dehydrogenase family
E4O04_RS04260	PF00814	Glycoprotease family
E4O04_RS04275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS04275	PF00512	His Kinase A (phospho-acceptor) domain
E4O04_RS04275	PF00072	Response regulator receiver domain
E4O04_RS04275	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
E4O04_RS04275	PF01627	Hpt domain
E4O04_RS04275	PF00672	HAMP domain
E4O04_RS04280	PF00072	Response regulator receiver domain
E4O04_RS04280	PF00486	Transcriptional regulatory protein, C terminal
E4O04_RS04290	PF08241	Methyltransferase domain
E4O04_RS04300	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS04300	PF00672	HAMP domain
E4O04_RS04300	PF02743	Cache domain
E4O04_RS04310	PF03167	Uracil DNA glycosylase superfamily
E4O04_RS04315	PF00270	DEAD/DEAH box helicase
E4O04_RS04315	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
E4O04_RS04315	PF18074	Primosomal protein N C-terminal domain
E4O04_RS04315	PF00271	Helicase conserved C-terminal domain
E4O04_RS04315	PF17764	3′ DNA-binding domain (3′BD)
E4O04_RS04350	PF00472	RF-1 domain
E4O04_RS04350	PF03462	PCRF domain
E4O04_RS04355	PF05175	Methyltransferase small domain
E4O04_RS04355	PF17827	PrmC N-terminal domain
E4O04_RS04365	PF09820	Predicted AAA-ATPase
E4O04_RS04365	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04390	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS04390	PF02743	Cache domain
E4O04_RS04390	PF00672	HAMP domain
E4O04_RS04395	PF05343	M42 glutamyl aminopeptidase
E4O04_RS04400	PF02254	TrkA-N domain
E4O04_RS04400	PF07885	Ion channel
E4O04_RS04440	PF00696	Amino acid kinase family
E4O04_RS04445	PF01554	MatE
E4O04_RS04450	PF01165	Ribosomal protein S21
E4O04_RS04460	PF00438	S-adenosylmethionine synthetase, N-terminal domain
E4O04_RS04460	PF02772	S-adenosylmethionine synthetase, central domain
E4O04_RS04460	PF02773	S-adenosylmethionine synthetase, C-terminal domain
E4O04_RS04480	PF01206	Sulfurtransferase TusA
E4O04_RS04500	PF00266	Aminotransferase class-V
E4O04_RS04505	PF00664	ABC transporter transmembrane region
E4O04_RS04505	PF00005	ABC transporter
E4O04_RS04510	PF00664	ABC transporter transmembrane region
E4O04_RS04510	PF00005	ABC transporter
E4O04_RS04510	PF08021	Siderophore-interacting FAD-binding domain
E4O04_RS04510	PF04954	Siderophore-interacting protein
E4O04_RS04515	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS04530	PF00005	ABC transporter
E4O04_RS04535	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS04535	PF08361	MAATS-type transcriptional repressor, C-terminal region
E4O04_RS04545	PF07669	Eco57I restriction-modification methylase
E4O04_RS04555	PF09820	Predicted AAA-ATPase
E4O04_RS04555	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04560	PF02547	Queuosine biosynthesis protein
E4O04_RS04565	PF12796	Ankyrin repeats (3 copies)
E4O04_RS04570	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
E4O04_RS04570	PF01871	AMMECR1
E4O04_RS04575	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04575	PF09820	Predicted AAA-ATPase
E4O04_RS04585	PF01202	Shikimate kinase
E4O04_RS04590	PF00390	Malic enzyme, N-terminal domain
E4O04_RS04590	PF03949	Malic enzyme, NAD binding domain
E4O04_RS04595	PF00183	Hsp90 protein
E4O04_RS04635	PF05598	Transposase domain (DUF772)
E4O04_RS04635	PF01609	Transposase DDE domain
E4O04_RS04645	PF01541	GIY-YIG catalytic domain
E4O04_RS04645	PF02151	UvrB/uvrC motif
E4O04_RS04645	PF08459	UvrC Helix-hairpin-helix N-terminal
E4O04_RS04650	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04650	PF09820	Predicted AAA-ATPase
E4O04_RS04655	PF12390	Selenocysteine synthase N terminal
E4O04_RS04655	PF03841	L-seryl-tRNA selenium transferase
E4O04_RS04660	PF00664	ABC transporter transmembrane region
E4O04_RS04660	PF00005	ABC transporter
E4O04_RS04660	PF03412	Peptidase C39 family
E4O04_RS04680	PF00471	Ribosomal protein L33
E4O04_RS04690	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
E4O04_RS04695	PF02357	Transcription termination factor nusG
E4O04_RS04695	PF00467	KOW motif
E4O04_RS04700	PF00298	Ribosomal protein L11, RNA binding domain
E4O04_RS04700	PF03946	Ribosomal protein L11, N-terminal domain
E4O04_RS04705	PF00687	Ribosomal protein L1p/L10e family
E4O04_RS04710	PF00466	Ribosomal protein L10
E4O04_RS04715	PF00542	Ribosomal protein L7/L12 C-terminal domain
E4O04_RS04715	PF16320	Ribosomal protein L7/L12 dimerisation domain
E4O04_RS04720	PF04563	RNA polymerase beta subunit
E4O04_RS04720	PF04561	RNA polymerase Rpb2, domain 2
E4O04_RS04720	PF04565	RNA polymerase Rpb2, domain 3
E4O04_RS04720	PF10385	RNA polymerase beta subunit external 1 domain
E4O04_RS04720	PF00562	RNA polymerase Rpb2, domain 6
E4O04_RS04720	PF04560	RNA polymerase Rpb2, domain 7
E4O04_RS04725	PF04998	RNA polymerase Rpb1, domain 5
E4O04_RS04725	PF04997	RNA polymerase Rpb1, domain 1
E4O04_RS04725	PF00623	RNA polymerase Rpb1, domain 2
E4O04_RS04725	PF05000	RNA polymerase Rpb1, domain 4
E4O04_RS04725	PF04983	RNA polymerase Rpb1, domain 3
E4O04_RS04755	PF00343	Carbohydrate phosphorylase
E4O04_RS04775	PF00155	Aminotransferase class I and II
E4O04_RS04790	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS04790	PF09820	Predicted AAA-ATPase
E4O04_RS04800	PF00156	Phosphoribosyl transferase domain
E4O04_RS04800	PF13537	Glutamine amidotransferase domain
E4O04_RS04825	PF04552	Sigma-54, DNA binding domain
E4O04_RS04825	PF04963	Sigma-54 factor, core binding domain
E4O04_RS04825	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
E4O04_RS04830	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS04840	PF01370	NAD dependent epimerase/dehydratase family
E4O04_RS04850	PF00468	Ribosomal protein L34
E4O04_RS04855	PF00825	Ribonuclease P
E4O04_RS04860	PF01809	Putative membrane protein insertion efficiency factor
E4O04_RS04865	PF14849	YidC periplasmic domain
E4O04_RS04865	PF02096	60Kd inner membrane protein
E4O04_RS04870	PF01424	R3H domain
E4O04_RS04870	PF14804	Jag N-terminus
E4O04_RS04880	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
E4O04_RS04890	PF03186	CobD/Cbib protein
E4O04_RS04895	PF00574	Clp protease
E4O04_RS04900	PF01609	Transposase DDE domain
E4O04_RS04900	PF13808	DDE_Tnp_1-associated
E4O04_RS04910	PF00113	Enolase, C-terminal TIM barrel domain
E4O04_RS04910	PF03952	Enolase, N-terminal domain
E4O04_RS04940	PF01609	Transposase DDE domain
E4O04_RS04940	PF05598	Transposase domain (DUF772)
E4O04_RS04975	PF02608	ABC transporter substrate-binding protein PnrA-like
E4O04_RS04980	PF00005	ABC transporter
E4O04_RS04985	PF02653	Branched-chain amino acid transport system / permease component
E4O04_RS04990	PF02653	Branched-chain amino acid transport system / permease component
E4O04_RS05000	PF04011	LemA family
E4O04_RS05005	PF03009	Glycerophosphoryl diester phosphodiesterase family
E4O04_RS05015	PF07009	NusG domain II
E4O04_RS05020	PF12792	CSS motif domain associated with EAL 
E4O04_RS05020	PF00563	EAL domain
E4O04_RS05025	PF08666	SAF domain
E4O04_RS05025	PF03102	NeuB family
E4O04_RS05040	PF11799	impB/mucB/samB family C-terminal domain
E4O04_RS05040	PF00817	impB/mucB/samB family
E4O04_RS05040	PF11798	IMS family HHH motif
E4O04_RS05050	PF13277	YmdB-like protein
E4O04_RS05065	PF09285	Elongation factor P, C-terminal
E4O04_RS05065	PF08207	Elongation factor P (EF-P) KOW-like domain
E4O04_RS05065	PF01132	Elongation factor P (EF-P) OB domain
E4O04_RS05070	PF00750	tRNA synthetases class I (R)
E4O04_RS05070	PF05746	DALR anticodon binding domain
E4O04_RS05070	PF03485	Arginyl tRNA synthetase N terminal domain
E4O04_RS05075	PF00156	Phosphoribosyl transferase domain
E4O04_RS05080	PF04002	RadC-like JAB domain
E4O04_RS05085	PF00768	D-alanyl-D-alanine carboxypeptidase
E4O04_RS05085	PF07943	Penicillin-binding protein 5, C-terminal domain
E4O04_RS05090	PF01336	OB-fold nucleic acid binding domain
E4O04_RS05090	PF00152	tRNA synthetases class II (D, K and N) 
E4O04_RS05100	PF01180	Dihydroorotate dehydrogenase
E4O04_RS05105	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05110	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05110	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS05115	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS05120	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05120	PF00005	ABC transporter
E4O04_RS05125	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05125	PF00005	ABC transporter
E4O04_RS05130	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS05145	PF00830	Ribosomal L28 family
E4O04_RS05155	PF01812	5-formyltetrahydrofolate cyclo-ligase family
E4O04_RS05170	PF01204	Trehalase
E4O04_RS05175	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
E4O04_RS05175	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
E4O04_RS05180	PF01226	Formate/nitrite transporter
E4O04_RS05185	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
E4O04_RS05185	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
E4O04_RS05190	PF00156	Phosphoribosyl transferase domain
E4O04_RS05200	PF00669	Bacterial flagellin N-terminal helical region
E4O04_RS05200	PF00700	Bacterial flagellin C-terminal helical region
E4O04_RS05205	PF00460	Flagella basal body rod protein
E4O04_RS05205	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
E4O04_RS05210	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
E4O04_RS05210	PF00460	Flagella basal body rod protein
E4O04_RS05215	PF10135	Rod binding protein
E4O04_RS05220	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS05220	PF02743	Cache domain
E4O04_RS05220	PF00672	HAMP domain
E4O04_RS05225	PF00005	ABC transporter
E4O04_RS05225	PF17760	UvrA interaction domain
E4O04_RS05225	PF17755	UvrA DNA-binding domain
E4O04_RS05235	PF09371	Tex-like protein N-terminal domain
E4O04_RS05235	PF00575	S1 RNA binding domain
E4O04_RS05235	PF16921	Tex protein YqgF-like domain
E4O04_RS05235	PF17674	HHH domain
E4O04_RS05260	PF05362	Lon protease (S16) C-terminal proteolytic domain
E4O04_RS05260	PF13654	AAA domain
E4O04_RS05265	PF02601	Exonuclease VII, large subunit
E4O04_RS05265	PF13742	OB-fold nucleic acid binding domain
E4O04_RS05275	PF04290	Tripartite ATP-independent periplasmic transporters, DctQ component
E4O04_RS05275	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
E4O04_RS05285	PF16811	TRAP transporter T-component
E4O04_RS05295	PF05034	Methylaspartate ammonia-lyase N-terminus
E4O04_RS05295	PF07476	Methylaspartate ammonia-lyase C-terminus
E4O04_RS05300	PF01212	Beta-eliminating lyase
E4O04_RS05305	PF01177	Asp/Glu/Hydantoin racemase
E4O04_RS05310	PF00375	Sodium:dicarboxylate symporter family
E4O04_RS05315	PF02310	B12 binding domain
E4O04_RS05320	PF13941	MutL protein
E4O04_RS05325	PF01783	Ribosomal L32p protein family
E4O04_RS05330	PF00550	Phosphopantetheine attachment site
E4O04_RS05335	PF00035	Double-stranded RNA binding motif
E4O04_RS05335	PF14622	Ribonuclease-III-like
E4O04_RS05340	PF00011	Hsp20/alpha crystallin family
E4O04_RS05355	PF13735	tRNA nucleotidyltransferase domain 2 putative
E4O04_RS05355	PF12627	Probable RNA and SrmB- binding site of polymerase A
E4O04_RS05355	PF01743	Poly A polymerase head domain
E4O04_RS05360	PF01544	CorA-like Mg2+ transporter protein
E4O04_RS05365	PF02719	Polysaccharide biosynthesis protein
E4O04_RS05370	PF01687	Riboflavin kinase
E4O04_RS05370	PF06574	FAD synthetase
E4O04_RS05375	PF00312	Ribosomal protein S15
E4O04_RS05380	PF00575	S1 RNA binding domain
E4O04_RS05380	PF00013	KH domain
E4O04_RS05380	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
E4O04_RS05380	PF01138	3' exoribonuclease family, domain 1
E4O04_RS05380	PF03725	3' exoribonuclease family, domain 2
E4O04_RS05385	PF00692	dUTPase
E4O04_RS05400	PF04304	Protein of unknown function (DUF454)
E4O04_RS05405	PF00164	Ribosomal protein S12/S23
E4O04_RS05410	PF00177	Ribosomal protein S7p/S5e
E4O04_RS05415	PF00679	Elongation factor G C-terminus
E4O04_RS05415	PF14492	Elongation Factor G, domain II
E4O04_RS05415	PF03764	Elongation factor G, domain IV
E4O04_RS05415	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS05415	PF03144	Elongation factor Tu domain 2
E4O04_RS05430	PF00301	Rubredoxin
E4O04_RS05440	PF00158	Sigma-54 interaction domain
E4O04_RS05440	PF02954	Bacterial regulatory protein, Fis family
E4O04_RS05440	PF13426	PAS domain
E4O04_RS05445	PF00155	Aminotransferase class I and II
E4O04_RS05450	PF03553	Na+/H+ antiporter family
E4O04_RS05455	PF02743	Cache domain
E4O04_RS05455	PF00672	HAMP domain
E4O04_RS05455	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS05460	PF00005	ABC transporter
E4O04_RS05460	PF00664	ABC transporter transmembrane region
E4O04_RS05465	PF00664	ABC transporter transmembrane region
E4O04_RS05465	PF00005	ABC transporter
E4O04_RS05470	PF01554	MatE
E4O04_RS05475	PF09820	Predicted AAA-ATPase
E4O04_RS05475	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS05480	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS05490	PF00005	ABC transporter
E4O04_RS05495	PF00005	ABC transporter
E4O04_RS05505	PF09334	tRNA synthetases class I (M)
E4O04_RS05505	PF01588	Putative tRNA binding domain
E4O04_RS05515	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05515	PF00005	ABC transporter
E4O04_RS05520	PF00005	ABC transporter
E4O04_RS05520	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05525	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS05525	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05530	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05535	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS05545	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05550	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS05550	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS05555	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05555	PF00005	ABC transporter
E4O04_RS05560	PF00005	ABC transporter
E4O04_RS05560	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS05565	PF01613	Flavin reductase like domain
E4O04_RS05565	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS05570	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
E4O04_RS05575	PF00398	Ribosomal RNA adenine dimethylase
E4O04_RS05585	PF00849	RNA pseudouridylate synthase
E4O04_RS05590	PF00849	RNA pseudouridylate synthase
E4O04_RS05590	PF01479	S4 domain
E4O04_RS05595	PF08245	Mur ligase middle domain
E4O04_RS05595	PF02875	Mur ligase family, glutamate ligase domain
E4O04_RS05600	PF02875	Mur ligase family, glutamate ligase domain
E4O04_RS05600	PF01225	Mur ligase family, catalytic domain
E4O04_RS05600	PF08245	Mur ligase middle domain
E4O04_RS05605	PF08340	Domain of unknown function (DUF1732)
E4O04_RS05605	PF03755	YicC-like family, N-terminal region 
E4O04_RS05625	PF03129	Anticodon binding domain
E4O04_RS05625	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
E4O04_RS05625	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E4O04_RS05640	PF16258	Domain of unknown function (DUF4912)
E4O04_RS05650	PF00842	Alanine racemase, C-terminal domain
E4O04_RS05650	PF01168	Alanine racemase, N-terminal domain
E4O04_RS05655	PF02401	LytB protein
E4O04_RS05685	PF01509	TruB family pseudouridylate synthase (N terminal domain)
E4O04_RS05690	PF02033	Ribosome-binding factor A
E4O04_RS05695	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS05695	PF11987	Translation-initiation factor 2
E4O04_RS05695	PF04760	Translation initiation factor IF-2, N-terminal region
E4O04_RS05700	PF13184	NusA-like KH domain
E4O04_RS05700	PF08529	NusA N-terminal domain
E4O04_RS05700	PF00575	S1 RNA binding domain
E4O04_RS05705	PF02576	RimP N-terminal domain
E4O04_RS05705	PF17384	RimP C-terminal SH3 domain
E4O04_RS05710	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
E4O04_RS05710	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
E4O04_RS05725	PF05191	Adenylate kinase, active site lid
E4O04_RS05735	PF13333	Integrase core domain
E4O04_RS05735	PF00665	Integrase core domain
E4O04_RS05735	PF13276	HTH-like domain
E4O04_RS05740	PF09820	Predicted AAA-ATPase
E4O04_RS05740	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS05755	PF00005	ABC transporter
E4O04_RS05760	PF00005	ABC transporter
E4O04_RS05760	PF02687	FtsX-like permease family
E4O04_RS05760	PF12704	MacB-like periplasmic core domain
E4O04_RS05765	PF00152	tRNA synthetases class II (D, K and N) 
E4O04_RS05780	PF08668	HDOD domain
E4O04_RS05785	PF02146	Sir2 family
E4O04_RS05795	PF01416	tRNA pseudouridine synthase
E4O04_RS05800	PF09986	Uncharacterized protein conserved in bacteria (DUF2225)
E4O04_RS05810	PF01725	Ham1 family
E4O04_RS05815	PF00664	ABC transporter transmembrane region
E4O04_RS05815	PF00005	ABC transporter
E4O04_RS05820	PF07859	alpha/beta hydrolase fold
E4O04_RS05825	PF16325	Peptidase family U32 C-terminal domain
E4O04_RS05825	PF01136	Peptidase family U32
E4O04_RS05830	PF05598	Transposase domain (DUF772)
E4O04_RS05830	PF01609	Transposase DDE domain
E4O04_RS05850	PF01212	Beta-eliminating lyase
E4O04_RS05870	PF01740	STAS domain
E4O04_RS05910	PF02390	Putative methyltransferase 
E4O04_RS05915	PF01264	Chorismate synthase
E4O04_RS06055	PF17762	HTH domain found in ParB protein
E4O04_RS06055	PF02195	ParB-like nuclease domain
E4O04_RS06105	PF02899	Phage integrase, N-terminal SAM-like domain
E4O04_RS06105	PF00589	Phage integrase family
E4O04_RS06120	PF00118	TCP-1/cpn60 chaperonin family
E4O04_RS06145	PF02233	NAD(P) transhydrogenase beta subunit
E4O04_RS06155	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
E4O04_RS06155	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
E4O04_RS06155	PF12769	4TM region of pyridine nucleotide transhydrogenase, mitoch
E4O04_RS06195	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
E4O04_RS06195	PF00326	Prolyl oligopeptidase family
E4O04_RS06200	PF02381	MraZ protein, putative antitoxin-like
E4O04_RS06205	PF01795	MraW methylase family
E4O04_RS06215	PF02875	Mur ligase family, glutamate ligase domain
E4O04_RS06215	PF08245	Mur ligase middle domain
E4O04_RS06215	PF01225	Mur ligase family, catalytic domain
E4O04_RS06220	PF01098	Cell cycle protein
E4O04_RS06230	PF02491	SHS2 domain inserted in FTSA
E4O04_RS06235	PF12327	FtsZ family, C-terminal domain
E4O04_RS06235	PF00091	Tubulin/FtsZ family, GTPase domain
E4O04_RS06240	PF02899	Phage integrase, N-terminal SAM-like domain
E4O04_RS06240	PF00589	Phage integrase family
E4O04_RS06250	PF02481	DNA recombination-mediator protein A
E4O04_RS06250	PF17782	DprA winged helix domain
E4O04_RS06255	PF01396	Topoisomerase DNA binding C4 zinc finger
E4O04_RS06255	PF01131	DNA topoisomerase
E4O04_RS06255	PF01751	Toprim domain
E4O04_RS06260	PF02899	Phage integrase, N-terminal SAM-like domain
E4O04_RS06260	PF00589	Phage integrase family
E4O04_RS06265	PF00227	Proteasome subunit
E4O04_RS06270	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS06270	PF07724	AAA domain (Cdc48 subfamily)
E4O04_RS06275	PF00460	Flagella basal body rod protein
E4O04_RS06280	PF00460	Flagella basal body rod protein
E4O04_RS06280	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
E4O04_RS06285	PF02049	Flagellar hook-basal body complex protein FliE
E4O04_RS06290	PF01514	Secretory protein of YscJ/FliF family
E4O04_RS06290	PF08345	Flagellar M-ring protein C-terminal
E4O04_RS06295	PF01706	FliG C-terminal domain
E4O04_RS06295	PF14842	FliG N-terminal domain
E4O04_RS06295	PF14841	FliG middle domain
E4O04_RS06300	PF02108	Flagellar assembly protein FliH
E4O04_RS06305	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E4O04_RS06305	PF02874	ATP synthase alpha/beta family, beta-barrel domain
E4O04_RS06305	PF18269	T3SS EscN ATPase C-terminal domain
E4O04_RS06320	PF00933	Glycosyl hydrolase family 3 N terminal domain
E4O04_RS06330	PF00950	ABC 3 transport family
E4O04_RS06335	PF00950	ABC 3 transport family
E4O04_RS06340	PF00005	ABC transporter
E4O04_RS06345	PF01297	Zinc-uptake complex component A periplasmic
E4O04_RS06350	PF10282	Lactonase, 7-bladed beta-propeller
E4O04_RS06365	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS06390	PF00121	Triosephosphate isomerase
E4O04_RS06405	PF02562	PhoH-like protein
E4O04_RS06410	PF07698	7TM receptor with intracellular HD hydrolase
E4O04_RS06410	PF07697	7TM-HD extracellular
E4O04_RS06410	PF01966	HD domain
E4O04_RS06415	PF02130	Uncharacterized protein family UPF0054
E4O04_RS06420	PF00571	CBS domain
E4O04_RS06420	PF03471	Transporter associated domain
E4O04_RS06435	PF01882	Protein of unknown function DUF58
E4O04_RS06445	PF00092	von Willebrand factor type A domain
E4O04_RS06465	PF00488	MutS domain V
E4O04_RS06465	PF01713	Smr domain
E4O04_RS06470	PF01966	HD domain
E4O04_RS06470	PF00072	Response regulator receiver domain
E4O04_RS06485	PF01235	Sodium:alanine symporter family
E4O04_RS06490	PF12804	MobA-like NTP transferase domain
E4O04_RS06495	PF02028	BCCT, betaine/carnitine/choline family transporter
E4O04_RS06510	PF04551	GcpE protein
E4O04_RS06525	PF00586	AIR synthase related protein, N-terminal domain
E4O04_RS06525	PF02769	AIR synthase related protein, C-terminal domain
E4O04_RS06530	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
E4O04_RS06530	PF02843	Phosphoribosylglycinamide synthetase, C domain
E4O04_RS06530	PF02844	Phosphoribosylglycinamide synthetase, N domain
E4O04_RS06540	PF01555	DNA methylase
E4O04_RS06545	PF04556	DpnII restriction endonuclease
E4O04_RS06550	PF02086	D12 class N6 adenine-specific DNA methyltransferase
E4O04_RS06560	PF12838	4Fe-4S dicluster domain
E4O04_RS06560	PF02256	Iron hydrogenase small subunit
E4O04_RS06560	PF02906	Iron only hydrogenase large subunit, C-terminal domain
E4O04_RS06565	PF04260	Protein of unknown function (DUF436) 
E4O04_RS06570	PF00586	AIR synthase related protein, N-terminal domain
E4O04_RS06570	PF02769	AIR synthase related protein, C-terminal domain
E4O04_RS06570	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
E4O04_RS06585	PF01734	Patatin-like phospholipase
E4O04_RS06605	PF12592	Protein of unknown function (DUF3763)
E4O04_RS06605	PF17868	AAA lid domain
E4O04_RS06605	PF07728	AAA domain (dynein-related subfamily)
E4O04_RS06615	PF05762	VWA domain containing CoxE-like protein
E4O04_RS06635	PF02743	Cache domain
E4O04_RS06635	PF00672	HAMP domain
E4O04_RS06635	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS06650	PF02559	CarD-like/TRCF domain
E4O04_RS06650	PF00270	DEAD/DEAH box helicase
E4O04_RS06650	PF03461	TRCF domain
E4O04_RS06650	PF17757	UvrB interaction domain
E4O04_RS06650	PF00271	Helicase conserved C-terminal domain
E4O04_RS06655	PF00005	ABC transporter
E4O04_RS06675	PF01523	Putative modulator of DNA gyrase
E4O04_RS06680	PF01523	Putative modulator of DNA gyrase
E4O04_RS06685	PF00381	PTS HPr component phosphorylation site
E4O04_RS06690	PF02603	HPr Serine kinase N terminus
E4O04_RS06690	PF07475	HPr Serine kinase C-terminal domain
E4O04_RS06695	PF01609	Transposase DDE domain
E4O04_RS06695	PF13808	DDE_Tnp_1-associated
E4O04_RS06705	PF00877	NlpC/P60 family
E4O04_RS06705	PF01476	LysM domain
E4O04_RS06725	PF02463	RecF/RecN/SMC N terminal domain
E4O04_RS06740	PF02779	Transketolase, pyrimidine binding domain
E4O04_RS06740	PF00456	Transketolase, thiamine diphosphate binding domain
E4O04_RS06745	PF01523	Putative modulator of DNA gyrase
E4O04_RS06755	PF00005	ABC transporter
E4O04_RS06755	PF00664	ABC transporter transmembrane region
E4O04_RS06755	PF03412	Peptidase C39 family
E4O04_RS06760	PF05872	Bacterial protein of unknown function (DUF853)
E4O04_RS06770	PF00905	Penicillin binding protein transpeptidase domain
E4O04_RS06770	PF03717	Penicillin-binding Protein dimerisation domain
E4O04_RS06800	PF01205	Uncharacterized protein family UPF0029
E4O04_RS06800	PF09186	Domain of unknown function (DUF1949)
E4O04_RS06825	PF03477	ATP cone domain
E4O04_RS06835	PF01145	SPFH domain / Band 7 family
E4O04_RS06840	PF01145	SPFH domain / Band 7 family
E4O04_RS06850	PF03062	MBOAT, membrane-bound O-acyltransferase family
E4O04_RS06860	PF08544	GHMP kinases C terminal 
E4O04_RS06860	PF00288	GHMP kinases N terminal domain
E4O04_RS06865	PF04026	SpoVG
E4O04_RS06875	PF01386	Ribosomal L25p family
E4O04_RS06875	PF14693	Ribosomal protein TL5, C-terminal domain
E4O04_RS06880	PF01171	PP-loop family
E4O04_RS06890	PF13180	PDZ domain
E4O04_RS06890	PF17820	PDZ domain
E4O04_RS06910	PF08275	DNA primase catalytic core, N-terminal domain
E4O04_RS06910	PF01807	CHC2 zinc finger
E4O04_RS06915	PF00140	Sigma-70 factor, region 1.2
E4O04_RS06915	PF04542	Sigma-70 region 2 
E4O04_RS06915	PF04539	Sigma-70 region 3
E4O04_RS06915	PF04545	Sigma-70, region 4
E4O04_RS06915	PF03979	Sigma-70 factor, region 1.1
E4O04_RS06950	PF03717	Penicillin-binding Protein dimerisation domain
E4O04_RS06950	PF00905	Penicillin binding protein transpeptidase domain
E4O04_RS06955	PF01098	Cell cycle protein
E4O04_RS06970	PF01263	Aldose 1-epimerase
E4O04_RS06980	PF00860	Permease family
E4O04_RS06985	PF08264	Anticodon-binding domain of tRNA
E4O04_RS06985	PF00133	tRNA synthetases class I (I, L, M and V)
E4O04_RS06985	PF10458	Valyl tRNA synthetase tRNA binding arm
E4O04_RS07020	PF08279	HTH domain
E4O04_RS07020	PF13280	WYL domain
E4O04_RS07065	PF04055	Radical SAM superfamily
E4O04_RS07065	PF13186	Iron-sulfur cluster-binding domain
E4O04_RS07070	PF00005	ABC transporter
E4O04_RS07070	PF00664	ABC transporter transmembrane region
E4O04_RS07080	PF00005	ABC transporter
E4O04_RS07090	PF02311	AraC-like ligand binding domain
E4O04_RS07090	PF12833	Helix-turn-helix domain
E4O04_RS07125	PF00005	ABC transporter
E4O04_RS07130	PF00271	Helicase conserved C-terminal domain
E4O04_RS07130	PF04851	Type III restriction enzyme, res subunit
E4O04_RS07130	PF02151	UvrB/uvrC motif
E4O04_RS07130	PF12344	Ultra-violet resistance protein B
E4O04_RS07130	PF17757	UvrB interaction domain
E4O04_RS07135	PF01256	Carbohydrate kinase
E4O04_RS07135	PF03853	YjeF-related protein N-terminus
E4O04_RS07140	PF00773	RNB domain
E4O04_RS07160	PF01467	Cytidylyltransferase-like
E4O04_RS07175	PF01991	ATP synthase (E/31 kDa) subunit
E4O04_RS07180	PF01022	Bacterial regulatory protein, arsR family
E4O04_RS07185	PF00403	Heavy-metal-associated domain
E4O04_RS07200	PF00849	RNA pseudouridylate synthase
E4O04_RS07200	PF01479	S4 domain
E4O04_RS07215	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
E4O04_RS07215	PF13237	4Fe-4S dicluster domain
E4O04_RS07215	PF13375	RnfC Barrel sandwich hybrid domain
E4O04_RS07215	PF10531	SLBB domain
E4O04_RS07220	PF03116	NQR2, RnfD, RnfE family
E4O04_RS07245	PF10609	NUBPL iron-transfer P-loop NTPase
E4O04_RS07255	PF01790	Prolipoprotein diacylglyceryl transferase
E4O04_RS07260	PF02540	NAD synthase
E4O04_RS07270	PF00005	ABC transporter
E4O04_RS07270	PF16326	ABC transporter C-terminal domain
E4O04_RS07270	PF12848	ABC transporter
E4O04_RS07275	PF08239	Bacterial SH3 domain
E4O04_RS07290	PF01966	HD domain
E4O04_RS07315	PF00999	Sodium/hydrogen exchanger family
E4O04_RS07335	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
E4O04_RS07335	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
E4O04_RS07340	PF00266	Aminotransferase class-V
E4O04_RS07345	PF13635	Domain of unknown function (DUF4143)
E4O04_RS07345	PF13173	AAA domain
E4O04_RS07360	PF14524	Wzt C-terminal domain
E4O04_RS07360	PF00005	ABC transporter
E4O04_RS07370	PF02423	Ornithine cyclodeaminase/mu-crystallin family
E4O04_RS07380	PF00535	Glycosyl transferase family 2
E4O04_RS07390	PF05523	WxcM-like, C-terminal 
E4O04_RS07405	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
E4O04_RS07420	PF01501	Glycosyl transferase family 8
E4O04_RS07420	PF00535	Glycosyl transferase family 2
E4O04_RS07425	PF01755	Glycosyltransferase family 25 (LPS biosynthesis protein)
E4O04_RS07435	PF00535	Glycosyl transferase family 2
E4O04_RS07445	PF02096	60Kd inner membrane protein
E4O04_RS07455	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
E4O04_RS07460	PF02096	60Kd inner membrane protein
E4O04_RS07460	PF14849	YidC periplasmic domain
E4O04_RS07470	PF13439	Glycosyltransferase Family 4
E4O04_RS07470	PF00534	Glycosyl transferases group 1
E4O04_RS07475	PF01370	NAD dependent epimerase/dehydratase family
E4O04_RS07480	PF00483	Nucleotidyl transferase
E4O04_RS07485	PF16363	GDP-mannose 4,6 dehydratase
E4O04_RS07490	PF13393	Histidyl-tRNA synthetase
E4O04_RS07495	PF08032	RNA 2'-O ribose methyltransferase substrate binding
E4O04_RS07495	PF00588	SpoU rRNA Methylase family
E4O04_RS07500	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
E4O04_RS07500	PF10996	Beta-Casp domain
E4O04_RS07500	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS07520	PF00664	ABC transporter transmembrane region
E4O04_RS07520	PF00005	ABC transporter
E4O04_RS07525	PF00664	ABC transporter transmembrane region
E4O04_RS07525	PF00005	ABC transporter
E4O04_RS07530	PF01177	Asp/Glu/Hydantoin racemase
E4O04_RS07535	PF16745	RsgA N-terminal domain
E4O04_RS07535	PF03193	RsgA GTPase
E4O04_RS07540	PF01713	Smr domain
E4O04_RS07540	PF00488	MutS domain V
E4O04_RS07550	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
E4O04_RS07560	PF00072	Response regulator receiver domain
E4O04_RS07560	PF00486	Transcriptional regulatory protein, C terminal
E4O04_RS07565	PF00072	Response regulator receiver domain
E4O04_RS07565	PF00512	His Kinase A (phospho-acceptor) domain
E4O04_RS07565	PF07495	Y_Y_Y domain
E4O04_RS07565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS07565	PF07494	Two component regulator propeller
E4O04_RS07565	PF12833	Helix-turn-helix domain
E4O04_RS07575	PF00005	ABC transporter
E4O04_RS07595	PF01973	Protein of unknown function DUF115
E4O04_RS07600	PF01973	Protein of unknown function DUF115
E4O04_RS07620	PF01300	Telomere recombination
E4O04_RS07630	PF01668	SmpB protein
E4O04_RS07635	PF10502	Signal peptidase, peptidase S26 
E4O04_RS07640	PF04055	Radical SAM superfamily
E4O04_RS07640	PF06969	HemN C-terminal domain
E4O04_RS07645	PF01966	HD domain
E4O04_RS07645	PF00672	HAMP domain
E4O04_RS07655	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
E4O04_RS07670	PF02465	Flagellar hook-associated protein 2 N-terminus
E4O04_RS07670	PF07195	Flagellar hook-associated protein 2 C-terminus
E4O04_RS07680	PF00669	Bacterial flagellin N-terminal helical region
E4O04_RS07680	PF00700	Bacterial flagellin C-terminal helical region
E4O04_RS07685	PF00669	Bacterial flagellin N-terminal helical region
E4O04_RS07685	PF00700	Bacterial flagellin C-terminal helical region
E4O04_RS07710	PF01321	Creatinase/Prolidase N-terminal domain
E4O04_RS07710	PF00557	Metallopeptidase family M24
E4O04_RS07720	PF01709	Transcriptional regulator
E4O04_RS07725	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
E4O04_RS07725	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
E4O04_RS07740	PF01584	CheW-like domain
E4O04_RS07740	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS07740	PF02895	Signal transducing histidine kinase, homodimeric domain
E4O04_RS07740	PF01627	Hpt domain
E4O04_RS07740	PF07194	P2 response regulator binding domain
E4O04_RS07745	PF01584	CheW-like domain
E4O04_RS07755	PF00072	Response regulator receiver domain
E4O04_RS07765	PF06470	SMC proteins Flexible Hinge Domain
E4O04_RS07765	PF02463	RecF/RecN/SMC N terminal domain
E4O04_RS07775	PF13525	Outer membrane lipoprotein
E4O04_RS07805	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS07815	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS07815	PF00072	Response regulator receiver domain
E4O04_RS07820	PF10397	Adenylosuccinate lyase C-terminus
E4O04_RS07820	PF00206	Lyase
E4O04_RS07830	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
E4O04_RS07830	PF00391	PEP-utilising enzyme, mobile domain
E4O04_RS07830	PF02896	PEP-utilising enzyme, TIM barrel domain
E4O04_RS07845	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E4O04_RS07845	PF07497	Rho termination factor, RNA-binding domain
E4O04_RS07845	PF07498	Rho termination factor, N-terminal domain
E4O04_RS07850	PF01197	Ribosomal protein L31
E4O04_RS07860	PF03313	Serine dehydratase alpha chain
E4O04_RS07865	PF03315	Serine dehydratase beta chain
E4O04_RS07865	PF01842	ACT domain
E4O04_RS07875	PF00005	ABC transporter
E4O04_RS07880	PF03239	Iron permease FTR1 family
E4O04_RS07885	PF10634	Fe2+ transport protein
E4O04_RS07900	PF12704	MacB-like periplasmic core domain
E4O04_RS07900	PF02687	FtsX-like permease family
E4O04_RS07905	PF00005	ABC transporter
E4O04_RS07925	PF05681	Fumarate hydratase (Fumerase)
E4O04_RS07930	PF05681	Fumarate hydratase (Fumerase)
E4O04_RS07930	PF05683	Fumarase C-terminus
E4O04_RS07935	PF08218	Citrate lyase ligase C-terminal domain
E4O04_RS07940	PF03802	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
E4O04_RS07940	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase 
E4O04_RS07965	PF13277	YmdB-like protein
E4O04_RS07975	PF00348	Polyprenyl synthetase
E4O04_RS07985	PF00533	BRCA1 C Terminus (BRCT) domain
E4O04_RS07985	PF01653	NAD-dependent DNA ligase adenylation domain
E4O04_RS07985	PF03120	NAD-dependent DNA ligase OB-fold domain
E4O04_RS08005	PF03692	Putative zinc- or iron-chelating domain
E4O04_RS08020	PF02618	YceG-like family
E4O04_RS08040	PF01351	Ribonuclease HII
E4O04_RS08045	PF02575	YbaB/EbfC DNA-binding family
E4O04_RS08050	PF02132	RecR protein
E4O04_RS08050	PF13662	Toprim domain
E4O04_RS08055	PF00365	Phosphofructokinase
E4O04_RS08060	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS08065	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS08070	PF12911	N-terminal TM domain of oligopeptide transport permease C
E4O04_RS08070	PF00528	Binding-protein-dependent transport system inner membrane component
E4O04_RS08075	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS08075	PF00005	ABC transporter
E4O04_RS08080	PF00005	ABC transporter
E4O04_RS08080	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
E4O04_RS08085	PF10437	Bacterial lipoate protein ligase C-terminus
E4O04_RS08085	PF03099	Biotin/lipoate A/B protein ligase family
E4O04_RS08090	PF04055	Radical SAM superfamily
E4O04_RS08095	PF01938	TRAM domain
E4O04_RS08095	PF00919	Uncharacterized protein family UPF0004
E4O04_RS08095	PF04055	Radical SAM superfamily
E4O04_RS08130	PF00534	Glycosyl transferases group 1
E4O04_RS08130	PF08323	Starch synthase catalytic domain
E4O04_RS08145	PF00152	tRNA synthetases class II (D, K and N) 
E4O04_RS08145	PF02938	GAD domain
E4O04_RS08145	PF01336	OB-fold nucleic acid binding domain
E4O04_RS08150	PF00579	tRNA synthetases class I (W and Y)
E4O04_RS08155	PF01584	CheW-like domain
E4O04_RS08165	PF01513	ATP-NAD kinase
E4O04_RS08170	PF00005	ABC transporter
E4O04_RS08170	PF12848	ABC transporter
E4O04_RS08175	PF02906	Iron only hydrogenase large subunit, C-terminal domain
E4O04_RS08175	PF02256	Iron hydrogenase small subunit
E4O04_RS08175	PF00037	4Fe-4S binding domain
E4O04_RS08175	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
E4O04_RS08180	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
E4O04_RS08180	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS08185	PF01888	CbiD
E4O04_RS08190	PF00005	ABC transporter
E4O04_RS08205	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS08205	PF08361	MAATS-type transcriptional repressor, C-terminal region
E4O04_RS08240	PF00881	Nitroreductase family
E4O04_RS08245	PF00293	NUDIX domain
E4O04_RS08295	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
E4O04_RS08295	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
E4O04_RS08320	PF02347	Glycine cleavage system P-protein
E4O04_RS08325	PF02347	Glycine cleavage system P-protein
E4O04_RS08330	PF01597	Glycine cleavage H-protein
E4O04_RS08335	PF01571	Aminomethyltransferase folate-binding domain
E4O04_RS08335	PF08669	Glycine cleavage T-protein C-terminal barrel domain
E4O04_RS08340	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
E4O04_RS08340	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS08350	PF01116	Fructose-bisphosphate aldolase class-II
E4O04_RS08355	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E4O04_RS08355	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E4O04_RS08360	PF02447	GntP family permease
E4O04_RS08365	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
E4O04_RS08365	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
E4O04_RS08370	PF01418	Helix-turn-helix domain, rpiR family
E4O04_RS08370	PF01380	SIS domain
E4O04_RS08380	PF04223	Citrate lyase, alpha subunit (CitF)
E4O04_RS08385	PF03328	HpcH/HpaI aldolase/citrate lyase family
E4O04_RS08390	PF06857	Malonate decarboxylase delta subunit (MdcD)
E4O04_RS08395	PF00476	DNA polymerase family A
E4O04_RS08395	PF01367	5'-3' exonuclease, C-terminal SAM fold
E4O04_RS08395	PF01612	3'-5' exonuclease
E4O04_RS08395	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
E4O04_RS08400	PF01121	Dephospho-CoA kinase
E4O04_RS08410	PF08501	Shikimate dehydrogenase substrate binding domain
E4O04_RS08410	PF01488	Shikimate / quinate 5-dehydrogenase
E4O04_RS08410	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
E4O04_RS08415	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
E4O04_RS08425	PF03793	PASTA domain
E4O04_RS08430	PF02911	Formyl transferase, C-terminal domain
E4O04_RS08430	PF00551	Formyl transferase
E4O04_RS08435	PF01327	Polypeptide deformylase
E4O04_RS08455	PF00005	ABC transporter
E4O04_RS08460	PF02632	BioY family
E4O04_RS08465	PF00005	ABC transporter
E4O04_RS08465	PF00664	ABC transporter transmembrane region
E4O04_RS08470	PF00005	ABC transporter
E4O04_RS08470	PF00664	ABC transporter transmembrane region
E4O04_RS08475	PF09820	Predicted AAA-ATPase
E4O04_RS08475	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS08480	PF00270	DEAD/DEAH box helicase
E4O04_RS08480	PF04408	Helicase associated domain (HA2)
E4O04_RS08480	PF00271	Helicase conserved C-terminal domain
E4O04_RS08480	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
E4O04_RS08500	PF01029	NusB family
E4O04_RS08505	PF13145	PPIC-type PPIASE domain
E4O04_RS08510	PF01411	tRNA synthetases class II (A)
E4O04_RS08510	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
E4O04_RS08515	PF00772	DnaB-like helicase N terminal domain
E4O04_RS08515	PF03796	DnaB-like helicase C terminal domain
E4O04_RS08535	PF01008	Initiation factor 2 subunit family
E4O04_RS08540	PF01008	Initiation factor 2 subunit family
E4O04_RS08550	PF00155	Aminotransferase class I and II
E4O04_RS08570	PF05698	Bacterial trigger factor protein (TF) C-terminus
E4O04_RS08570	PF05697	Bacterial trigger factor protein (TF)
E4O04_RS08570	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
E4O04_RS08575	PF00574	Clp protease
E4O04_RS08580	PF07724	AAA domain (Cdc48 subfamily)
E4O04_RS08580	PF10431	C-terminal, D2-small domain, of ClpB protein 
E4O04_RS08580	PF06689	ClpX C4-type zinc finger
E4O04_RS08590	PF03948	Ribosomal protein L9, C-terminal domain
E4O04_RS08590	PF01281	Ribosomal protein L9, N-terminal domain
E4O04_RS08595	PF01084	Ribosomal protein S18
E4O04_RS08600	PF00436	Single-strand binding protein family
E4O04_RS08605	PF01250	Ribosomal protein S6
E4O04_RS08620	PF01813	ATP synthase subunit D 
E4O04_RS08625	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E4O04_RS08625	PF02874	ATP synthase alpha/beta family, beta-barrel domain
E4O04_RS08630	PF02874	ATP synthase alpha/beta family, beta-barrel domain
E4O04_RS08630	PF16886	ATPsynthase alpha/beta subunit N-term extension
E4O04_RS08630	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
E4O04_RS08635	PF00156	Phosphoribosyl transferase domain
E4O04_RS08640	PF00563	EAL domain
E4O04_RS08640	PF00360	Phytochrome region
E4O04_RS08640	PF01590	GAF domain
E4O04_RS08640	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS08645	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
E4O04_RS08660	PF00005	ABC transporter
E4O04_RS08675	PF07171	MlrC C-terminus
E4O04_RS08675	PF07364	Metallopeptidase family M81
E4O04_RS08680	PF00300	Histidine phosphatase superfamily (branch 1)
E4O04_RS08705	PF02464	Competence-damaged protein
E4O04_RS08705	PF00994	Probable molybdopterin binding domain
E4O04_RS08715	PF00795	Carbon-nitrogen hydrolase
E4O04_RS08720	PF00216	Bacterial DNA-binding protein
E4O04_RS08725	PF01649	Ribosomal protein S20
E4O04_RS08735	PF04620	Flagellar filament outer layer protein Flaa
E4O04_RS08745	PF01520	N-acetylmuramoyl-L-alanine amidase
E4O04_RS08750	PF00162	Phosphoglycerate kinase
E4O04_RS08775	PF01171	PP-loop family
E4O04_RS08775	PF00117	Glutamine amidotransferase class-I
E4O04_RS08775	PF00958	GMP synthase C terminal domain
E4O04_RS08790	PF01743	Poly A polymerase head domain
E4O04_RS08790	PF12626	Polymerase A arginine-rich C-terminus
E4O04_RS08790	PF12627	Probable RNA and SrmB- binding site of polymerase A
E4O04_RS08815	PF18565	Glycoside hydrolase family 2 C-terminal domain 5
E4O04_RS08815	PF16355	Domain of unknown function (DUF4982)
E4O04_RS08815	PF00703	Glycosyl hydrolases family 2
E4O04_RS08815	PF02837	Glycosyl hydrolases family 2, sugar binding domain
E4O04_RS08815	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
E4O04_RS08820	PF00684	DnaJ central domain
E4O04_RS08820	PF01556	DnaJ C terminal domain
E4O04_RS08820	PF00226	DnaJ domain
E4O04_RS08825	PF00557	Metallopeptidase family M24
E4O04_RS08830	PF03372	Endonuclease/Exonuclease/phosphatase family
E4O04_RS08840	PF00037	4Fe-4S binding domain
E4O04_RS08850	PF01551	Peptidase family M23
E4O04_RS08850	PF04225	Opacity-associated protein A LysM-like domain
E4O04_RS08860	PF00912	Transglycosylase
E4O04_RS08860	PF00905	Penicillin binding protein transpeptidase domain
E4O04_RS08860	PF17092	Penicillin-binding protein OB-like domain
E4O04_RS08870	PF00501	AMP-binding enzyme
E4O04_RS08980	PF01555	DNA methylase
E4O04_RS09095	PF02417	Chromate transporter
E4O04_RS09100	PF02417	Chromate transporter
E4O04_RS09115	PF01467	Cytidylyltransferase-like
E4O04_RS09120	PF01018	GTP1/OBG
E4O04_RS09120	PF01926	50S ribosome-binding GTPase
E4O04_RS09125	PF01016	Ribosomal L27 protein
E4O04_RS09135	PF00829	Ribosomal prokaryotic L21 protein
E4O04_RS09140	PF04294	VanW like protein
E4O04_RS09150	PF16363	GDP-mannose 4,6 dehydratase
E4O04_RS09155	PF06397	Desulfoferrodoxin, N-terminal domain
E4O04_RS09155	PF01880	Desulfoferrodoxin
E4O04_RS09190	PF00300	Histidine phosphatase superfamily (branch 1)
E4O04_RS09205	PF00912	Transglycosylase
E4O04_RS09210	PF01209	ubiE/COQ5 methyltransferase family
E4O04_RS09215	PF05598	Transposase domain (DUF772)
E4O04_RS09215	PF01609	Transposase DDE domain
E4O04_RS09265	PF01361	Tautomerase enzyme
E4O04_RS09405	PF13495	Phage integrase, N-terminal SAM-like domain
E4O04_RS09405	PF00589	Phage integrase family
E4O04_RS09430	PF00005	ABC transporter
E4O04_RS09440	PF06463	Molybdenum Cofactor Synthesis C
E4O04_RS09440	PF04055	Radical SAM superfamily
E4O04_RS09480	PF01330	RuvA N terminal domain
E4O04_RS09485	PF02075	Crossover junction endodeoxyribonuclease RuvC
E4O04_RS09490	PF05193	Peptidase M16 inactive domain
E4O04_RS09490	PF00675	Insulinase (Peptidase family M16)
E4O04_RS09490	PF08367	Peptidase M16C associated
E4O04_RS09495	PF03412	Peptidase C39 family
E4O04_RS09495	PF00005	ABC transporter
E4O04_RS09495	PF00664	ABC transporter transmembrane region
E4O04_RS09535	PF04452	RNA methyltransferase
E4O04_RS09540	PF13180	PDZ domain
E4O04_RS09540	PF03572	Peptidase family S41
E4O04_RS09550	PF12848	ABC transporter
E4O04_RS09550	PF00005	ABC transporter
E4O04_RS09585	PF00232	Glycosyl hydrolase family 1
E4O04_RS09600	PF00919	Uncharacterized protein family UPF0004
E4O04_RS09600	PF04055	Radical SAM superfamily
E4O04_RS09615	PF05525	Branched-chain amino acid transport protein
E4O04_RS09625	PF01131	DNA topoisomerase
E4O04_RS09625	PF01751	Toprim domain
E4O04_RS09635	PF02534	Type IV secretory system Conjugative DNA transfer
E4O04_RS09645	PF00437	Type II/IV secretion system protein
E4O04_RS09670	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
E4O04_RS09695	PF03743	Bacterial conjugation TrbI-like protein 
E4O04_RS09745	PF04434	SWIM zinc finger
E4O04_RS09745	PF00176	SNF2 family N-terminal domain
E4O04_RS09745	PF00271	Helicase conserved C-terminal domain
E4O04_RS09760	PF04002	RadC-like JAB domain
E4O04_RS09800	PF01555	DNA methylase
E4O04_RS09805	PF00436	Single-strand binding protein family
E4O04_RS09860	PF14492	Elongation Factor G, domain II
E4O04_RS09860	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS09860	PF03144	Elongation factor Tu domain 2
E4O04_RS09860	PF06421	GTP-binding protein LepA C-terminus
E4O04_RS09860	PF00679	Elongation factor G C-terminus
E4O04_RS09865	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS09865	PF09820	Predicted AAA-ATPase
E4O04_RS09870	PF13187	4Fe-4S dicluster domain
E4O04_RS09870	PF04060	Putative Fe-S cluster
E4O04_RS09870	PF00037	4Fe-4S binding domain
E4O04_RS09875	PF07650	KH domain
E4O04_RS09875	PF01926	50S ribosome-binding GTPase
E4O04_RS09880	PF01808	AICARFT/IMPCHase bienzyme
E4O04_RS09880	PF02142	MGS-like domain
E4O04_RS09885	PF00551	Formyl transferase
E4O04_RS09890	PF07516	SecA Wing and Scaffold domain
E4O04_RS09890	PF02810	SEC-C motif
E4O04_RS09890	PF07517	SecA DEAD-like domain
E4O04_RS09890	PF01043	SecA preprotein cross-linking domain
E4O04_RS09895	PF00392	Bacterial regulatory proteins, gntR family
E4O04_RS09900	PF00005	ABC transporter
E4O04_RS09910	PF01648	4'-phosphopantetheinyl transferase superfamily
E4O04_RS09920	PF02457	DisA bacterial checkpoint controller nucleotide-binding
E4O04_RS09925	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
E4O04_RS09925	PF02779	Transketolase, pyrimidine binding domain
E4O04_RS09925	PF02780	Transketolase, C-terminal domain
E4O04_RS09940	PF06971	Putative DNA-binding protein N-terminus
E4O04_RS09940	PF02629	CoA binding domain
E4O04_RS09945	PF10672	S-adenosylmethionine-dependent methyltransferase
E4O04_RS09950	PF05496	Holliday junction DNA helicase RuvB P-loop domain
E4O04_RS09950	PF17864	RuvB AAA lid domain
E4O04_RS09950	PF05491	RuvB C-terminal winged helix domain
E4O04_RS09955	PF00465	Iron-containing alcohol dehydrogenase 
E4O04_RS09960	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E4O04_RS09960	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E4O04_RS09975	PF13186	Iron-sulfur cluster-binding domain
E4O04_RS09990	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
E4O04_RS10010	PF03484	tRNA synthetase B5 domain
E4O04_RS10010	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
E4O04_RS10030	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
E4O04_RS10050	PF00163	Ribosomal protein S4/S9 N-terminal domain
E4O04_RS10050	PF01479	S4 domain
E4O04_RS10080	PF02653	Branched-chain amino acid transport system / permease component
E4O04_RS10085	PF02653	Branched-chain amino acid transport system / permease component
E4O04_RS10095	PF02608	ABC transporter substrate-binding protein PnrA-like
E4O04_RS10100	PF00753	Metallo-beta-lactamase superfamily
E4O04_RS10100	PF12706	Beta-lactamase superfamily domain
E4O04_RS10115	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS10115	PF03144	Elongation factor Tu domain 2
E4O04_RS10115	PF09105	Elongation factor SelB, winged helix 
E4O04_RS10115	PF09106	Elongation factor SelB, winged helix 
E4O04_RS10115	PF09107	Elongation factor SelB, winged helix 
E4O04_RS10120	PF02690	Na+/Pi-cotransporter
E4O04_RS10125	PF13180	PDZ domain
E4O04_RS10125	PF17820	PDZ domain
E4O04_RS10135	PF01728	FtsJ-like methyltransferase
E4O04_RS10140	PF00072	Response regulator receiver domain
E4O04_RS10140	PF00158	Sigma-54 interaction domain
E4O04_RS10140	PF02954	Bacterial regulatory protein, Fis family
E4O04_RS10145	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS10145	PF00512	His Kinase A (phospho-acceptor) domain
E4O04_RS10145	PF00989	PAS fold
E4O04_RS10150	PF09115	DNA polymerase III, delta subunit, C terminal
E4O04_RS10155	PF02674	Colicin V production protein
E4O04_RS10160	PF04101	Glycosyltransferase family 28 C-terminal domain
E4O04_RS10160	PF03033	Glycosyltransferase family 28 N-terminal domain
E4O04_RS10210	PF04773	FecR protein
E4O04_RS10215	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS10215	PF00672	HAMP domain
E4O04_RS10235	PF06733	DEAD_2
E4O04_RS10235	PF13307	Helicase C-terminal domain
E4O04_RS10250	PF10415	Fumarase C C-terminus
E4O04_RS10250	PF00206	Lyase
E4O04_RS10255	PF01078	Magnesium chelatase, subunit ChlI
E4O04_RS10255	PF13335	Magnesium chelatase, subunit ChlI C-terminal
E4O04_RS10265	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
E4O04_RS10265	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
E4O04_RS10265	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
E4O04_RS10265	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
E4O04_RS10270	PF00929	Exonuclease
E4O04_RS10275	PF01432	Peptidase family M3
E4O04_RS10275	PF08439	Oligopeptidase F
E4O04_RS10290	PF01593	Flavin containing amine oxidoreductase
E4O04_RS10295	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS10320	PF03606	C4-dicarboxylate anaerobic carrier
E4O04_RS10330	PF07687	Peptidase dimerisation domain
E4O04_RS10330	PF01546	Peptidase family M20/M25/M40
E4O04_RS10415	PF05785	Rho-activating domain of cytotoxic necrotizing factor
E4O04_RS10415	PF18807	Tripartite Tc toxins repeat
E4O04_RS10435	PF18807	Tripartite Tc toxins repeat
E4O04_RS10435	PF05785	Rho-activating domain of cytotoxic necrotizing factor
E4O04_RS10475	PF00691	OmpA family
E4O04_RS10480	PF01026	TatD related DNase
E4O04_RS10490	PF03330	Lytic transglycolase
E4O04_RS10490	PF03330	Lytic transglycolase
E4O04_RS10500	PF00483	Nucleotidyl transferase
E4O04_RS10505	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS10505	PF02861	Clp amino terminal domain, pathogenicity island component
E4O04_RS10505	PF10431	C-terminal, D2-small domain, of ClpB protein 
E4O04_RS10505	PF07724	AAA domain (Cdc48 subfamily)
E4O04_RS10505	PF17871	AAA lid domain
E4O04_RS10510	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
E4O04_RS10515	PF02151	UvrB/uvrC motif
E4O04_RS10525	PF00005	ABC transporter
E4O04_RS10530	PF12704	MacB-like periplasmic core domain
E4O04_RS10530	PF02687	FtsX-like permease family
E4O04_RS10540	PF00448	SRP54-type protein, GTPase domain
E4O04_RS10540	PF02881	SRP54-type protein, helical bundle domain
E4O04_RS10570	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS10590	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS10610	PF00266	Aminotransferase class-V
E4O04_RS10655	PF04023	FeoA domain
E4O04_RS10655	PF07664	Ferrous iron transport protein B C terminus
E4O04_RS10655	PF17910	FeoB cytosolic helical domain
E4O04_RS10655	PF02421	Ferrous iron transport protein B
E4O04_RS10655	PF07670	Nucleoside recognition
E4O04_RS10660	PF04023	FeoA domain
E4O04_RS10670	PF00005	ABC transporter
E4O04_RS10675	PF00005	ABC transporter
E4O04_RS10680	PF09820	Predicted AAA-ATPase
E4O04_RS10680	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS10685	PF02609	Exonuclease VII small subunit
E4O04_RS10690	PF08676	MutL C terminal dimerisation domain
E4O04_RS10690	PF01119	DNA mismatch repair protein, C-terminal domain
E4O04_RS10700	PF01042	Endoribonuclease L-PSP
E4O04_RS10725	PF04055	Radical SAM superfamily
E4O04_RS10730	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS10730	PF00563	EAL domain
E4O04_RS10730	PF03707	Bacterial signalling protein N terminal repeat
E4O04_RS10750	PF02954	Bacterial regulatory protein, Fis family
E4O04_RS10750	PF00072	Response regulator receiver domain
E4O04_RS10750	PF00158	Sigma-54 interaction domain
E4O04_RS10755	PF00575	S1 RNA binding domain
E4O04_RS10770	PF00588	SpoU rRNA Methylase family
E4O04_RS10775	PF00696	Amino acid kinase family
E4O04_RS10780	PF00226	DnaJ domain
E4O04_RS10780	PF01556	DnaJ C terminal domain
E4O04_RS10780	PF00684	DnaJ central domain
E4O04_RS10785	PF01176	Translation initiation factor 1A / IF-1
E4O04_RS10790	PF01258	Prokaryotic dksA/traR C4-type zinc finger
E4O04_RS10795	PF02978	Signal peptide binding domain
E4O04_RS10795	PF00448	SRP54-type protein, GTPase domain
E4O04_RS10795	PF02881	SRP54-type protein, helical bundle domain
E4O04_RS10800	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
E4O04_RS10800	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
E4O04_RS10805	PF00497	Bacterial extracellular solute-binding proteins, family 3
E4O04_RS10810	PF00497	Bacterial extracellular solute-binding proteins, family 3
E4O04_RS10820	PF00144	Beta-lactamase
E4O04_RS10825	PF07075	Protein of unknown function (DUF1343)
E4O04_RS10875	PF01979	Amidohydrolase family
E4O04_RS10885	PF00270	DEAD/DEAH box helicase
E4O04_RS10885	PF00271	Helicase conserved C-terminal domain
E4O04_RS10905	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
E4O04_RS10925	PF00005	ABC transporter
E4O04_RS10925	PF13732	Domain of unknown function (DUF4162)
E4O04_RS10930	PF07228	Stage II sporulation protein E (SpoIIE)
E4O04_RS10930	PF00672	HAMP domain
E4O04_RS10940	PF03687	Uncharacterised protein family (UPF0164)
E4O04_RS10945	PF00521	DNA gyrase/topoisomerase IV, subunit A
E4O04_RS10950	PF00005	ABC transporter
E4O04_RS10960	PF09338	Glycine/sarcosine/betaine reductase component B subunits
E4O04_RS10965	PF02677	Epoxyqueuosine reductase QueH
E4O04_RS10975	PF02617	ATP-dependent Clp protease adaptor protein ClpS
E4O04_RS10980	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS10980	PF07724	AAA domain (Cdc48 subfamily)
E4O04_RS10980	PF17871	AAA lid domain
E4O04_RS10980	PF02861	Clp amino terminal domain, pathogenicity island component
E4O04_RS10980	PF10431	C-terminal, D2-small domain, of ClpB protein 
E4O04_RS10985	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
E4O04_RS11010	PF01891	Cobalt uptake substrate-specific transmembrane region
E4O04_RS11015	PF00005	ABC transporter
E4O04_RS11050	PF00326	Prolyl oligopeptidase family
E4O04_RS11050	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
E4O04_RS11055	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS11055	PF09820	Predicted AAA-ATPase
E4O04_RS11060	PF00912	Transglycosylase
E4O04_RS11060	PF00905	Penicillin binding protein transpeptidase domain
E4O04_RS11060	PF06832	Penicillin-Binding Protein C-terminus Family
E4O04_RS11065	PF03313	Serine dehydratase alpha chain
E4O04_RS11070	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS11090	PF01476	LysM domain
E4O04_RS11090	PF01464	Transglycosylase SLT domain
E4O04_RS11100	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
E4O04_RS11105	PF05164	Cell division protein ZapA
E4O04_RS11115	PF00453	Ribosomal protein L20
E4O04_RS11120	PF01632	Ribosomal protein L35
E4O04_RS11125	PF05198	Translation initiation factor IF-3, N-terminal domain
E4O04_RS11125	PF00707	Translation initiation factor IF-3, C-terminal domain
E4O04_RS11165	PF00005	ABC transporter
E4O04_RS11175	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS11175	PF09820	Predicted AAA-ATPase
E4O04_RS11180	PF13302	Acetyltransferase (GNAT) domain
E4O04_RS11185	PF01189	16S rRNA methyltransferase RsmB/F
E4O04_RS11185	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
E4O04_RS11185	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
E4O04_RS11190	PF04298	Putative neutral zinc metallopeptidase
E4O04_RS11210	PF08241	Methyltransferase domain
E4O04_RS11220	PF01758	Sodium Bile acid symporter family
E4O04_RS11235	PF03773	Predicted permease
E4O04_RS11240	PF01022	Bacterial regulatory protein, arsR family
E4O04_RS11265	PF00654	Voltage gated chloride channel
E4O04_RS11270	PF01926	50S ribosome-binding GTPase
E4O04_RS11270	PF12631	MnmE helical domain
E4O04_RS11270	PF10396	GTP-binding protein TrmE N-terminus
E4O04_RS11275	PF01569	PAP2 superfamily
E4O04_RS11285	PF14353	CpXC protein
E4O04_RS11300	PF00501	AMP-binding enzyme
E4O04_RS11305	PF02195	ParB-like nuclease domain
E4O04_RS11305	PF17762	HTH domain found in ParB protein
E4O04_RS11315	PF01551	Peptidase family M23
E4O04_RS11320	PF01368	DHH family
E4O04_RS11320	PF02272	DHHA1 domain
E4O04_RS11320	PF17768	RecJ OB domain
E4O04_RS11320	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
E4O04_RS11325	PF02885	Glycosyl transferase family, helical bundle domain
E4O04_RS11325	PF00591	Glycosyl transferase family, a/b domain
E4O04_RS11325	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
E4O04_RS11340	PF00155	Aminotransferase class I and II
E4O04_RS11345	PF01479	S4 domain
E4O04_RS11345	PF00849	RNA pseudouridylate synthase
E4O04_RS11355	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
E4O04_RS11355	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
E4O04_RS11355	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
E4O04_RS11355	PF10371	Domain of unknown function
E4O04_RS11355	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
E4O04_RS11360	PF01177	Asp/Glu/Hydantoin racemase
E4O04_RS11365	PF01053	Cys/Met metabolism PLP-dependent enzyme
E4O04_RS11380	PF03553	Na+/H+ antiporter family
E4O04_RS11385	PF13726	Na+-H+ antiporter family
E4O04_RS11385	PF03553	Na+/H+ antiporter family
E4O04_RS11390	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
E4O04_RS11390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS11405	PF01784	NIF3 (NGG1p interacting factor 3)
E4O04_RS11410	PF07478	D-ala D-ala ligase C-terminus
E4O04_RS11410	PF01820	D-ala D-ala ligase N-terminus
E4O04_RS11415	PF00288	GHMP kinases N terminal domain
E4O04_RS11415	PF08544	GHMP kinases C terminal 
E4O04_RS11415	PF10509	Galactokinase galactose-binding signature
E4O04_RS11435	PF13847	Methyltransferase domain
E4O04_RS11440	PF02653	Branched-chain amino acid transport system / permease component
E4O04_RS11445	PF00005	ABC transporter
E4O04_RS11450	PF13407	Periplasmic binding protein domain
E4O04_RS11450	PF18610	Periplasmic binding protein domain
E4O04_RS11460	PF10502	Signal peptidase, peptidase S26 
E4O04_RS11470	PF03129	Anticodon binding domain
E4O04_RS11470	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E4O04_RS11470	PF04073	Aminoacyl-tRNA editing domain
E4O04_RS11490	PF01297	Zinc-uptake complex component A periplasmic
E4O04_RS11500	PF07687	Peptidase dimerisation domain
E4O04_RS11500	PF01546	Peptidase family M20/M25/M40
E4O04_RS11515	PF00005	ABC transporter
E4O04_RS11520	PF01032	FecCD transport family
E4O04_RS11530	PF07476	Methylaspartate ammonia-lyase C-terminus
E4O04_RS11530	PF05034	Methylaspartate ammonia-lyase N-terminus
E4O04_RS11535	PF06368	Methylaspartate mutase E chain (MutE)
E4O04_RS11545	PF03932	CutC family
E4O04_RS11555	PF00204	DNA gyrase B
E4O04_RS11555	PF00986	DNA gyrase B subunit, carboxyl terminus
E4O04_RS11555	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
E4O04_RS11555	PF01751	Toprim domain
E4O04_RS11560	PF00899	ThiF family
E4O04_RS11565	PF00953	Glycosyl transferase family 4
E4O04_RS11575	PF00860	Permease family
E4O04_RS11595	PF13333	Integrase core domain
E4O04_RS11595	PF13276	HTH-like domain
E4O04_RS11595	PF00665	Integrase core domain
E4O04_RS11605	PF09820	Predicted AAA-ATPase
E4O04_RS11605	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS11610	PF03819	MazG nucleotide pyrophosphohydrolase domain
E4O04_RS11615	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
E4O04_RS11615	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
E4O04_RS11620	PF03129	Anticodon binding domain
E4O04_RS11620	PF02824	TGS domain
E4O04_RS11620	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E4O04_RS11620	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
E4O04_RS11630	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
E4O04_RS11630	PF02542	YgbB family
E4O04_RS11635	PF02542	YgbB family
E4O04_RS11645	PF13419	Haloacid dehalogenase-like hydrolase
E4O04_RS11655	PF00924	Mechanosensitive ion channel
E4O04_RS11670	PF10509	Galactokinase galactose-binding signature
E4O04_RS11670	PF08544	GHMP kinases C terminal 
E4O04_RS11680	PF00595	PDZ domain
E4O04_RS11685	PF01312	FlhB HrpN YscU SpaS Family
E4O04_RS11690	PF00072	Response regulator receiver domain
E4O04_RS11695	PF02021	Uncharacterised protein family UPF0102
E4O04_RS11710	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
E4O04_RS11710	PF02403	Seryl-tRNA synthetase N-terminal domain
E4O04_RS11730	PF00158	Sigma-54 interaction domain
E4O04_RS11730	PF01590	GAF domain
E4O04_RS11735	PF01168	Alanine racemase, N-terminal domain
E4O04_RS11755	PF09820	Predicted AAA-ATPase
E4O04_RS11755	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS11760	PF03006	Haemolysin-III related
E4O04_RS11765	PF01551	Peptidase family M23
E4O04_RS11765	PF10145	Phage-related minor tail protein
E4O04_RS11765	PF01464	Transglycosylase SLT domain
E4O04_RS11775	PF04542	Sigma-70 region 2 
E4O04_RS11775	PF08281	Sigma-70, region 4
E4O04_RS11790	PF00924	Mechanosensitive ion channel
E4O04_RS11795	PF00196	Bacterial regulatory proteins, luxR family
E4O04_RS11795	PF00072	Response regulator receiver domain
E4O04_RS11805	PF07685	CobB/CobQ-like glutamine amidotransferase domain
E4O04_RS11815	PF05598	Transposase domain (DUF772)
E4O04_RS11815	PF01609	Transposase DDE domain
E4O04_RS11835	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS11835	PF00672	HAMP domain
E4O04_RS11840	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS11840	PF17871	AAA lid domain
E4O04_RS11840	PF10431	C-terminal, D2-small domain, of ClpB protein 
E4O04_RS11840	PF02861	Clp amino terminal domain, pathogenicity island component
E4O04_RS11840	PF07724	AAA domain (Cdc48 subfamily)
E4O04_RS11845	PF03806	AbgT putative transporter family
E4O04_RS11870	PF13361	UvrD-like helicase C-terminal domain
E4O04_RS11870	PF00580	UvrD/REP helicase N-terminal domain
E4O04_RS11875	PF00664	ABC transporter transmembrane region
E4O04_RS11875	PF00005	ABC transporter
E4O04_RS11880	PF00005	ABC transporter
E4O04_RS11880	PF00664	ABC transporter transmembrane region
E4O04_RS11885	PF00375	Sodium:dicarboxylate symporter family
E4O04_RS11890	PF02073	Thermophilic metalloprotease (M29)
E4O04_RS11895	PF08264	Anticodon-binding domain of tRNA
E4O04_RS11895	PF00133	tRNA synthetases class I (I, L, M and V)
E4O04_RS11895	PF09334	tRNA synthetases class I (M)
E4O04_RS11895	PF13603	Leucyl-tRNA synthetase, Domain 2
E4O04_RS11905	PF02163	Peptidase family M50
E4O04_RS11905	PF17820	PDZ domain
E4O04_RS11910	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
E4O04_RS11910	PF13288	DXP reductoisomerase C-terminal domain
E4O04_RS11910	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
E4O04_RS11920	PF01255	Putative undecaprenyl diphosphate synthase
E4O04_RS11925	PF01765	Ribosome recycling factor
E4O04_RS11930	PF00889	Elongation factor TS
E4O04_RS11935	PF00318	Ribosomal protein S2
E4O04_RS11940	PF02545	Maf-like protein
E4O04_RS11960	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
E4O04_RS11960	PF07196	Flagellin hook IN motif
E4O04_RS11965	PF07196	Flagellin hook IN motif
E4O04_RS11965	PF00669	Bacterial flagellin N-terminal helical region
E4O04_RS11965	PF00700	Bacterial flagellin C-terminal helical region
E4O04_RS11970	PF02623	FliW protein
E4O04_RS11975	PF02599	Global regulator protein family
E4O04_RS11985	PF01032	FecCD transport family
E4O04_RS11995	PF02734	DAK2 domain
E4O04_RS11995	PF02733	Dak1 domain
E4O04_RS12000	PF02733	Dak1 domain
E4O04_RS12015	PF07969	Amidohydrolase family
E4O04_RS12020	PF03553	Na+/H+ antiporter family
E4O04_RS12030	PF04073	Aminoacyl-tRNA editing domain
E4O04_RS12040	PF12801	4Fe-4S binding domain
E4O04_RS12040	PF04205	FMN-binding domain
E4O04_RS12045	PF08534	Redoxin
E4O04_RS12050	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
E4O04_RS12055	PF05175	Methyltransferase small domain
E4O04_RS12070	PF00005	ABC transporter
E4O04_RS12085	PF07730	Histidine kinase
E4O04_RS12095	PF02654	Cobalamin-5-phosphate synthase
E4O04_RS12105	PF07478	D-ala D-ala ligase C-terminus
E4O04_RS12105	PF01820	D-ala D-ala ligase N-terminus
E4O04_RS12115	PF02446	4-alpha-glucanotransferase
E4O04_RS12135	PF01609	Transposase DDE domain
E4O04_RS12135	PF05598	Transposase domain (DUF772)
E4O04_RS12140	PF00672	HAMP domain
E4O04_RS12140	PF02743	Cache domain
E4O04_RS12140	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS12145	PF03764	Elongation factor G, domain IV
E4O04_RS12145	PF14492	Elongation Factor G, domain II
E4O04_RS12145	PF00679	Elongation factor G C-terminus
E4O04_RS12145	PF03144	Elongation factor Tu domain 2
E4O04_RS12145	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS12155	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS12160	PF03781	Sulfatase-modifying factor enzyme 1
E4O04_RS12180	PF00501	AMP-binding enzyme
E4O04_RS12180	PF13193	AMP-binding enzyme C-terminal domain
E4O04_RS12185	PF00877	NlpC/P60 family
E4O04_RS12195	PF01963	TraB family
E4O04_RS12200	PF02926	THUMP domain
E4O04_RS12200	PF01170	Putative RNA methylase family UPF0020
E4O04_RS12205	PF03979	Sigma-70 factor, region 1.1
E4O04_RS12205	PF04542	Sigma-70 region 2 
E4O04_RS12205	PF00140	Sigma-70 factor, region 1.2
E4O04_RS12205	PF04545	Sigma-70, region 4
E4O04_RS12205	PF04539	Sigma-70 region 3
E4O04_RS12210	PF00166	Chaperonin 10 Kd subunit
E4O04_RS12230	PF00871	Acetokinase family
E4O04_RS12235	PF00211	Adenylate and Guanylate cyclase catalytic domain
E4O04_RS12240	PF01554	MatE
E4O04_RS12245	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
E4O04_RS12245	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
E4O04_RS12250	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
E4O04_RS12250	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
E4O04_RS12255	PF00005	ABC transporter
E4O04_RS12270	PF01546	Peptidase family M20/M25/M40
E4O04_RS12270	PF07687	Peptidase dimerisation domain
E4O04_RS12275	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS12275	PF09820	Predicted AAA-ATPase
E4O04_RS12280	PF00580	UvrD/REP helicase N-terminal domain
E4O04_RS12280	PF13361	UvrD-like helicase C-terminal domain
E4O04_RS12325	PF08011	PD-(D/E)XK nuclease superfamily
E4O04_RS12325	PF09820	Predicted AAA-ATPase
E4O04_RS12340	PF01245	Ribosomal protein L19
E4O04_RS12345	PF01746	tRNA (Guanine-1)-methyltransferase
E4O04_RS12350	PF01782	RimM N-terminal domain
E4O04_RS12360	PF00886	Ribosomal protein S16
E4O04_RS12365	PF02277	Phosphoribosyltransferase
E4O04_RS12370	PF00005	ABC transporter
E4O04_RS12375	PF09383	NIL domain
E4O04_RS12375	PF00005	ABC transporter
E4O04_RS12390	PF01479	S4 domain
E4O04_RS12390	PF00849	RNA pseudouridylate synthase
E4O04_RS12395	PF04079	Segregation and condensation complex subunit ScpB
E4O04_RS12400	PF02616	Segregation and condensation protein ScpA
E4O04_RS12405	PF00154	recA bacterial DNA recombination protein
E4O04_RS12410	PF02872	5'-nucleotidase, C-terminal domain
E4O04_RS12410	PF00149	Calcineurin-like phosphoesterase
E4O04_RS12420	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
E4O04_RS12420	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS12440	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
E4O04_RS12440	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
E4O04_RS12440	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
E4O04_RS12440	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
E4O04_RS12445	PF02308	MgtC family
E4O04_RS12465	PF00579	tRNA synthetases class I (W and Y)
E4O04_RS12470	PF01479	S4 domain
E4O04_RS12470	PF00849	RNA pseudouridylate synthase
E4O04_RS12490	PF00596	Class II Aldolase and Adducin N-terminal domain
E4O04_RS12495	PF00072	Response regulator receiver domain
E4O04_RS12495	PF00196	Bacterial regulatory proteins, luxR family
E4O04_RS12505	PF00380	Ribosomal protein S9/S16
E4O04_RS12510	PF00572	Ribosomal protein L13
E4O04_RS12525	PF02743	Cache domain
E4O04_RS12525	PF00672	HAMP domain
E4O04_RS12525	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS12530	PF00672	HAMP domain
E4O04_RS12530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS12530	PF00672	HAMP domain
E4O04_RS12530	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS12530	PF02743	Cache domain
E4O04_RS12530	PF02743	Cache domain
E4O04_RS12545	PF16314	Domain of unknown function (DUF4954)
E4O04_RS12555	PF02896	PEP-utilising enzyme, TIM barrel domain
E4O04_RS12555	PF00391	PEP-utilising enzyme, mobile domain
E4O04_RS12570	PF13519	von Willebrand factor type A domain
E4O04_RS12580	PF00581	Rhodanese-like domain
E4O04_RS12580	PF17773	UPF0176 acylphosphatase like domain
E4O04_RS12585	PF10531	SLBB domain
E4O04_RS12585	PF13375	RnfC Barrel sandwich hybrid domain
E4O04_RS12585	PF13237	4Fe-4S dicluster domain
E4O04_RS12585	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
E4O04_RS12590	PF03116	NQR2, RnfD, RnfE family
E4O04_RS12595	PF04205	FMN-binding domain
E4O04_RS12600	PF02508	Rnf-Nqr subunit, membrane protein
E4O04_RS12605	PF02508	Rnf-Nqr subunit, membrane protein
E4O04_RS12615	PF02127	Aminopeptidase I zinc metalloprotease (M18)
E4O04_RS12620	PF13932	GidA associated domain
E4O04_RS12620	PF01134	Glucose inhibited division protein A
E4O04_RS12625	PF01636	Phosphotransferase enzyme family
E4O04_RS12630	PF01008	Initiation factor 2 subunit family
E4O04_RS12640	PF00596	Class II Aldolase and Adducin N-terminal domain
E4O04_RS12645	PF01053	Cys/Met metabolism PLP-dependent enzyme
E4O04_RS12650	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
E4O04_RS12650	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
E4O04_RS12655	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E4O04_RS12655	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E4O04_RS12660	PF08245	Mur ligase middle domain
E4O04_RS12660	PF01225	Mur ligase family, catalytic domain
E4O04_RS12660	PF02875	Mur ligase family, glutamate ligase domain
E4O04_RS12670	PF07977	FabA-like domain
E4O04_RS12675	PF00440	Bacterial regulatory proteins, tetR family
E4O04_RS12675	PF08361	MAATS-type transcriptional repressor, C-terminal region
E4O04_RS12690	PF00005	ABC transporter
E4O04_RS12695	PF00005	ABC transporter
E4O04_RS12695	PF00664	ABC transporter transmembrane region
E4O04_RS12700	PF00005	ABC transporter
E4O04_RS12700	PF00664	ABC transporter transmembrane region
E4O04_RS12710	PF01546	Peptidase family M20/M25/M40
E4O04_RS12710	PF07687	Peptidase dimerisation domain
E4O04_RS12715	PF03606	C4-dicarboxylate anaerobic carrier
E4O04_RS12720	PF01638	HxlR-like helix-turn-helix
E4O04_RS12725	PF01613	Flavin reductase like domain
E4O04_RS12735	PF05726	Pirin C-terminal cupin domain
E4O04_RS12735	PF02678	Pirin
E4O04_RS12755	PF00664	ABC transporter transmembrane region
E4O04_RS12755	PF00005	ABC transporter
E4O04_RS12760	PF00664	ABC transporter transmembrane region
E4O04_RS12760	PF03412	Peptidase C39 family
E4O04_RS12760	PF00005	ABC transporter
E4O04_RS12775	PF02203	Tar ligand binding domain homologue
E4O04_RS12775	PF00672	HAMP domain
E4O04_RS12775	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
E4O04_RS12795	PF11855	Protein of unknown function (DUF3375)
E4O04_RS12800	PF01022	Bacterial regulatory protein, arsR family
E4O04_RS12815	PF00005	ABC transporter
E4O04_RS12855	PF06803	Protein of unknown function (DUF1232)
E4O04_RS12870	PF01555	DNA methylase
E4O04_RS12890	PF00271	Helicase conserved C-terminal domain
E4O04_RS12890	PF00176	SNF2 family N-terminal domain
E4O04_RS12910	PF02796	Helix-turn-helix domain of resolvase
E4O04_RS12910	PF00239	Resolvase, N terminal domain
E4O04_RS12925	PF01139	tRNA-splicing ligase RtcB
E4O04_RS12930	PF13091	PLD-like domain
E4O04_RS12930	PF13396	Phospholipase_D-nuclease N-terminal
E4O04_RS12950	PF13460	NAD(P)H-binding 
E4O04_RS12955	PF02082	Transcriptional regulator
E4O04_RS12970	PF03009	Glycerophosphoryl diester phosphodiesterase family
E4O04_RS12980	PF00708	Acylphosphatase
E4O04_RS13000	PF01196	Ribosomal protein L17
E4O04_RS13005	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
E4O04_RS13005	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
E4O04_RS13005	PF01000	RNA polymerase Rpb3/RpoA insert domain
E4O04_RS13010	PF00411	Ribosomal protein S11
E4O04_RS13015	PF00416	Ribosomal protein S13/S18
E4O04_RS13020	PF00444	Ribosomal protein L36
E4O04_RS13025	PF00344	SecY translocase
E4O04_RS13030	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
E4O04_RS13035	PF00327	Ribosomal protein L30p/L7e
E4O04_RS13040	PF03719	Ribosomal protein S5, C-terminal domain
E4O04_RS13040	PF00333	Ribosomal protein S5, N-terminal domain
E4O04_RS13045	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
E4O04_RS13050	PF00347	Ribosomal protein L6
E4O04_RS13055	PF00410	Ribosomal protein S8
E4O04_RS13060	PF00253	Ribosomal protein S14p/S29e
E4O04_RS13065	PF00673	ribosomal L5P family C-terminus
E4O04_RS13065	PF00281	Ribosomal protein L5
E4O04_RS13070	PF00467	KOW motif
E4O04_RS13070	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
E4O04_RS13075	PF00238	Ribosomal protein L14p/L23e
E4O04_RS13080	PF00366	Ribosomal protein S17
E4O04_RS13085	PF00831	Ribosomal L29 protein
E4O04_RS13090	PF00252	Ribosomal protein L16p/L10e
E4O04_RS13095	PF00189	Ribosomal protein S3, C-terminal domain
E4O04_RS13095	PF07650	KH domain
E4O04_RS13100	PF00237	Ribosomal protein L22p/L17e
E4O04_RS13105	PF00203	Ribosomal protein S19
E4O04_RS13110	PF03947	Ribosomal Proteins L2, C-terminal domain
E4O04_RS13110	PF00181	Ribosomal Proteins L2, RNA binding domain
E4O04_RS13115	PF00276	Ribosomal protein L23
E4O04_RS13120	PF00573	Ribosomal protein L4/L1 family
E4O04_RS13125	PF00297	Ribosomal protein L3
E4O04_RS13130	PF00338	Ribosomal protein S10p/S20e
E4O04_RS13135	PF03143	Elongation factor Tu C-terminal domain
E4O04_RS13135	PF03144	Elongation factor Tu domain 2
E4O04_RS13135	PF00009	Elongation factor Tu GTP binding domain
E4O04_RS13145	PF00082	Subtilase family
E4O04_RS13145	PF05922	Peptidase inhibitor I9
E4O04_RS13165	PF01032	FecCD transport family
E4O04_RS13170	PF00005	ABC transporter
E4O04_RS13175	PF03553	Na+/H+ antiporter family
E4O04_RS13180	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
E4O04_RS13185	PF11867	Domain of unknown function (DUF3387)
E4O04_RS13185	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
E4O04_RS13185	PF18766	SWI2/SNF2 ATPase
E4O04_RS13205	PF00589	Phage integrase family
E4O04_RS13205	PF02899	Phage integrase, N-terminal SAM-like domain
E4O04_RS13210	PF01420	Type I restriction modification DNA specificity domain
E4O04_RS13230	PF02384	N-6 DNA Methylase
E4O04_RS13240	PF00085	Thioredoxin
E4O04_RS13245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
E4O04_RS13280	PF01799	[2Fe-2S] binding domain
E4O04_RS13280	PF00111	2Fe-2S iron-sulfur cluster binding domain
E4O04_RS13290	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
E4O04_RS13340	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
E4O04_RS13345	PF03412	Peptidase C39 family
E4O04_RS13345	PF00005	ABC transporter
E4O04_RS13345	PF00664	ABC transporter transmembrane region
E4O04_RS13385	PF02719	Polysaccharide biosynthesis protein
E4O04_RS13405	PF01625	Peptide methionine sulfoxide reductase
E4O04_RS13405	PF01641	SelR domain
E4O04_RS13425	PF01145	SPFH domain / Band 7 family
E4O04_RS13430	PF01145	SPFH domain / Band 7 family
E4O04_RS13450	PF00005	ABC transporter
E4O04_RS13455	PF08543	Phosphomethylpyrimidine kinase
E4O04_RS13460	PF00664	ABC transporter transmembrane region
E4O04_RS13460	PF00005	ABC transporter
E4O04_RS13470	PF01636	Phosphotransferase enzyme family
E4O04_RS13480	PF00731	AIR carboxylase
E4O04_RS13485	PF01259	SAICAR synthetase
E4O04_RS13490	PF00106	short chain dehydrogenase
E4O04_RS13495	PF00436	Single-strand binding protein family
E4O04_RS13500	PF02699	Preprotein translocase subunit
E4O04_RS13505	PF02355	Protein export membrane protein
E4O04_RS13510	PF02355	Protein export membrane protein
E4O04_RS13515	PF00266	Aminotransferase class-V
E4O04_RS13525	PF01206	Sulfurtransferase TusA
E4O04_RS13555	PF01381	Helix-turn-helix
E4O04_RS13560	PF05015	RelE-like toxin of type II toxin-antitoxin system HigB
E4O04_RS13580	PF00004	ATPase family associated with various cellular activities (AAA)
E4O04_RS13580	PF05362	Lon protease (S16) C-terminal proteolytic domain
E4O04_RS13580	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
E4O04_RS13590	PF01458	Uncharacterized protein family (UPF0051)
E4O04_RS13595	PF00005	ABC transporter
E4O04_RS13630	PF03390	2-hydroxycarboxylate transporter family
E4O04_RS13665	PF08032	RNA 2'-O ribose methyltransferase substrate binding
E4O04_RS13665	PF00588	SpoU rRNA Methylase family
E4O04_RS13670	PF13419	Haloacid dehalogenase-like hydrolase
E4O04_RS13680	PF01769	Divalent cation transporter
E4O04_RS13680	PF00571	CBS domain
E4O04_RS13680	PF03448	MgtE intracellular N domain
E4O04_RS13690	PF04452	RNA methyltransferase
E4O04_RS13710	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
E4O04_RS13710	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
E4O04_RS13715	PF14572	Phosphoribosyl synthetase-associated domain
E4O04_RS13715	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
E4O04_RS13720	PF00072	Response regulator receiver domain
E4O04_RS13720	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS13725	PF00563	EAL domain
E4O04_RS13725	PF00990	Diguanylate cyclase, GGDEF domain
E4O04_RS13730	PF03193	RsgA GTPase
E4O04_RS13740	PF01026	TatD related DNase
E4O04_RS13745	PF01207	Dihydrouridine synthase (Dus)
E4O04_RS13785	PF01420	Type I restriction modification DNA specificity domain
E4O04_RS13790	PF02899	Phage integrase, N-terminal SAM-like domain
E4O04_RS13790	PF00589	Phage integrase family
E4O04_RS13795	PF01420	Type I restriction modification DNA specificity domain
E4O04_RS13800	PF03543	Yersinia/Haemophilus virulence surface antigen
E4O04_RS13800	PF13332	Hemagglutinin repeat
E4O04_RS13800	PF05860	haemagglutination activity domain
E4O04_RS13800	PF13018	Extended Signal Peptide of Type V secretion system
E4O04_RS13800	PF02661	Fic/DOC family
E4O04_RS13805	PF02384	N-6 DNA Methylase
E4O04_RS13810	PF08463	EcoEI R protein C-terminal
E4O04_RS13810	PF00271	Helicase conserved C-terminal domain
E4O04_RS13810	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
E4O04_RS13810	PF04851	Type III restriction enzyme, res subunit
E4O04_RS13830	PF01926	50S ribosome-binding GTPase
E4O04_RS13830	PF13167	GTP-binding GTPase N-terminal
E4O04_RS13830	PF16360	GTP-binding GTPase Middle Region
E4O04_RS13850	PF01476	LysM domain
E4O04_RS13850	PF08525	Opacity-associated protein A N-terminal motif
E4O04_RS13850	PF01551	Peptidase family M23
E4O04_RS13855	PF02423	Ornithine cyclodeaminase/mu-crystallin family
E4O04_RS13860	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
E4O04_RS13865	PF00813	FliP family
E4O04_RS13875	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
E4O04_RS13875	PF04509	CheC-like family
E4O04_RS13880	PF02154	Flagellar motor switch protein FliM
E4O04_RS13880	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
E4O04_RS13885	PF03748	Flagellar basal body-associated protein FliL
E4O04_RS13890	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
E4O04_RS13890	PF00691	OmpA family
E4O04_RS13895	PF01618	MotA/TolQ/ExbB proton channel family
E4O04_RS13905	PF07559	Flagellar basal body protein FlaE
E4O04_RS13905	PF00460	Flagella basal body rod protein
E4O04_RS13905	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
E4O04_RS13910	PF03963	Flagellar hook capping protein - N-terminal region
E4O04_RS13940	PF00221	Aromatic amino acid lyase
E4O04_RS13945	PF02028	BCCT, betaine/carnitine/choline family transporter
E4O04_RS13950	PF13478	XdhC Rossmann domain
E4O04_RS13950	PF02625	XdhC and CoxI family
E4O04_RS13960	PF01799	[2Fe-2S] binding domain
E4O04_RS13960	PF00111	2Fe-2S iron-sulfur cluster binding domain
E4O04_RS13970	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
E4O04_RS13970	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
E4O04_RS13975	PF00005	ABC transporter
E4O04_RS13980	PF01032	FecCD transport family
E4O04_RS14005	PF00561	alpha/beta hydrolase fold
E4O04_RS14030	PF00664	ABC transporter transmembrane region
E4O04_RS14030	PF00005	ABC transporter
E4O04_RS14035	PF00664	ABC transporter transmembrane region
E4O04_RS14035	PF00005	ABC transporter
E4O04_RS14050	PF17239	Family of unknown function (DUF5312)
E4O04_RS14060	PF07733	Bacterial DNA polymerase III alpha NTPase domain
E4O04_RS14060	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
E4O04_RS14060	PF14579	Helix-hairpin-helix motif
E4O04_RS14060	PF02811	PHP domain
