locus-tag	class	description
ABH09_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ABH09_RS00015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABH09_RS00020	COG0156	8-amino-7-oxononanoate synthase activity
ABH09_RS00060	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
ABH09_RS00065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_RS00070	COG1120	ATPase activity
ABH09_RS00075	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ABH09_RS00090	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABH09_RS00095	COG0326	Molecular chaperone. Has ATPase activity
ABH09_RS00100	COG1162	GTPase activity
ABH09_RS00110	COG1132	(ABC) transporter
ABH09_RS00125	COG2378	regulation of single-species biofilm formation
ABH09_RS00165	COG1132	(ABC) transporter
ABH09_RS00175	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABH09_RS00210	COG2183	response to ionizing radiation
ABH09_RS00225	COG2949	membrane
ABH09_RS00270	COG0425	Belongs to the sulfur carrier protein TusA family
ABH09_RS00285	COG1012	belongs to the aldehyde dehydrogenase family
ABH09_RS00300	COG0673	inositol 2-dehydrogenase activity
ABH09_RS00305	COG0191	fructose-bisphosphate aldolase activity
ABH09_RS00310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_RS00320	COG1349	DNA-binding transcription factor activity
ABH09_RS00325	COG1879	ABC-type sugar transport system periplasmic component
ABH09_RS00330	COG1129	ABC transporter
ABH09_RS00335	COG1172	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS00340	COG0673	inositol 2-dehydrogenase activity
ABH09_RS00355	COG0438	transferase activity, transferring glycosyl groups
ABH09_RS00355	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABH09_RS00360	COG0488	(ABC) transporter
ABH09_RS00380	COG1054	Belongs to the UPF0176 family
ABH09_RS00385	COG0024	Methionine aminopeptidase
ABH09_RS00390	COG0484	heat shock protein binding
ABH09_RS00410	COG0739	heme binding
ABH09_RS00415	COG0534	Mate efflux family protein
ABH09_RS00430	COG1129	ABC transporter
ABH09_RS00550	COG1757	Na H antiporter
ABH09_RS00555	COG2203	Gaf domain
ABH09_RS00555	COG2199	diguanylate cyclase activity
ABH09_RS00635	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_RS00640	COG1917	Cupin 2, conserved barrel domain protein
ABH09_RS00640	COG4977	sequence-specific DNA binding
ABH09_RS00655	COG1129	ABC transporter
ABH09_RS00660	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABH09_RS00670	COG2211	Major facilitator Superfamily
ABH09_RS00675	COG1640	4-alpha-glucanotransferase
ABH09_RS00680	COG1132	(ABC) transporter
ABH09_RS00685	COG1132	(ABC) transporter
ABH09_RS00690	COG2217	Heavy metal translocating P-type atpase
ABH09_RS00695	COG0640	Transcriptional regulator
ABH09_RS00710	COG2217	Heavy metal translocating P-type atpase
ABH09_RS00760	COG1191	sigma factor activity
ABH09_RS00780	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ABH09_RS00830	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
ABH09_RS00835	COG0180	Tryptophanyl-tRNA synthetase
ABH09_RS00840	COG0670	Belongs to the BI1 family
ABH09_RS00855	COG2604	Protein of unknown function DUF115
ABH09_RS00860	COG0768	penicillin binding
ABH09_RS00865	COG0681	Belongs to the peptidase S26 family
ABH09_RS01200	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABH09_RS01210	COG0613	PHP domain protein
ABH09_RS01235	COG1193	negative regulation of DNA recombination
ABH09_RS01245	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ABH09_RS01290	COG0629	single-stranded DNA binding
ABH09_RS01300	COG0281	malic enzyme
ABH09_RS01305	COG0039	L-malate dehydrogenase activity
ABH09_RS01340	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ABH09_RS01350	COG0513	Belongs to the DEAD box helicase family
ABH09_RS01370	COG0395	ABC-type sugar transport system, permease component
ABH09_RS01375	COG1175	transmembrane transport
ABH09_RS01385	COG2011	ABC-type metal ion transport system permease component
ABH09_RS01395	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_RS01410	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ABH09_RS01410	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ABH09_RS01420	COG0351	phosphomethylpyrimidine kinase
ABH09_RS01480	COG0840	transmembrane signaling receptor activity
ABH09_RS01505	COG0825	malonyl-CoA metabolic process
ABH09_RS01510	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ABH09_RS01525	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ABH09_RS01530	COG4656	Part of a membrane complex involved in electron transport
ABH09_RS01535	COG4658	electron transport chain
ABH09_RS01540	COG4659	FMN binding
ABH09_RS01545	COG4660	Part of a membrane complex involved in electron transport
ABH09_RS01550	COG4657	Part of a membrane complex involved in electron transport
ABH09_RS01555	COG2878	Part of a membrane complex involved in electron transport
ABH09_RS01560	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ABH09_RS01565	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_RS01570	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABH09_RS01575	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_RS01585	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
ABH09_RS01600	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ABH09_RS01615	COG0653	protein targeting
ABH09_RS01620	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_RS01625	COG0450	alkyl hydroperoxide reductase
ABH09_RS01635	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ABH09_RS01650	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ABH09_RS01655	COG1671	Belongs to the UPF0178 family
ABH09_RS01660	COG3437	response regulator, receiver
ABH09_RS01665	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABH09_RS01670	COG1115	amino acid carrier protein
ABH09_RS01680	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_RS01685	COG3041	Addiction module toxin RelE StbE family
ABH09_RS01700	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABH09_RS01715	COG1131	(ABC) transporter
ABH09_RS01735	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ABH09_RS01770	COG4656	Part of a membrane complex involved in electron transport
ABH09_RS01780	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
ABH09_RS01785	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABH09_RS01800	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ABH09_RS01810	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ABH09_RS01810	COG3608	succinylglutamate desuccinylase aspartoacylase
ABH09_RS01825	COG1121	(ABC) transporter
ABH09_RS01830	COG1639	'signal transduction protein
ABH09_RS01835	COG0543	2 iron, 2 sulfur cluster binding
ABH09_RS01850	COG0733	neurotransmitter:sodium symporter activity
ABH09_RS01855	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_RS01860	COG1129	ABC transporter
ABH09_RS01865	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS01870	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS01875	COG3177	Filamentation induced by cAMP protein fic
ABH09_RS01890	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABH09_RS01905	COG4536	flavin adenine dinucleotide binding
ABH09_RS01920	COG0542	response to heat
ABH09_RS01955	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ABH09_RS01965	COG0513	Belongs to the DEAD box helicase family
ABH09_RS01970	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ABH09_RS01975	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ABH09_RS01980	COG1028	Short-chain dehydrogenase reductase Sdr
ABH09_RS01985	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ABH09_RS01995	COG1647	Serine aminopeptidase, S33
ABH09_RS02060	COG1309	transcriptional regulator
ABH09_RS02075	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABH09_RS02080	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ABH09_RS02080	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ABH09_RS02125	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ABH09_RS02130	COG0706	membrane insertase activity
ABH09_RS02135	COG1847	R3H domain protein
ABH09_RS02145	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ABH09_RS02150	COG1862	Preprotein translocase
ABH09_RS02155	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABH09_RS02160	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ABH09_RS02165	COG1040	competence protein
ABH09_RS02175	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ABH09_RS02185	COG0058	SHG alpha-glucan phosphorylase activity
ABH09_RS02200	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ABH09_RS02205	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_RS02215	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
ABH09_RS02220	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ABH09_RS02225	COG0457	Tetratricopeptide repeat
ABH09_RS02230	COG0733	neurotransmitter:sodium symporter activity
ABH09_RS02255	COG1102	Psort location Cytoplasmic, score
ABH09_RS02285	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ABH09_RS02325	COG0544	peptidyl-prolyl cis-trans isomerase activity
ABH09_RS02330	COG0740	serine-type endopeptidase activity
ABH09_RS02335	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ABH09_RS02345	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ABH09_RS02365	COG0395	ABC-type sugar transport system, permease component
ABH09_RS02370	COG4209	transmembrane transport
ABH09_RS02395	COG1129	ABC transporter
ABH09_RS02440	COG0481	GTPase activity
ABH09_RS02465	COG0018	arginyl-trna synthetase
ABH09_RS02470	COG2235	arginine
ABH09_RS02475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ABH09_RS02480	COG0549	Belongs to the carbamate kinase family
ABH09_RS02485	COG1288	antiporter activity
ABH09_RS02490	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ABH09_RS02495	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ABH09_RS02500	COG0017	Asparaginyl-tRNA synthetase
ABH09_RS02525	COG1733	regulation of RNA biosynthetic process
ABH09_RS02610	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ABH09_RS02615	COG1181	Belongs to the D-alanine--D-alanine ligase family
ABH09_RS02630	COG1570	exodeoxyribonuclease VII activity
ABH09_RS02645	COG0747	negative chemotaxis
ABH09_RS02650	COG0601	transmembrane transport
ABH09_RS02665	COG4608	Belongs to the ABC transporter superfamily
ABH09_RS02670	COG1132	(ABC) transporter
ABH09_RS02675	COG1132	(ABC) transporter
ABH09_RS02710	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ABH09_RS02715	COG1362	aminopeptidase activity
ABH09_RS02750	COG1373	ATPase (AAA superfamily
ABH09_RS02765	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ABH09_RS02800	COG1216	Glycosyl transferase, family 2
ABH09_RS02810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ABH09_RS02835	COG1393	Belongs to the ArsC family
ABH09_RS02900	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ABH09_RS02905	COG1192	Involved in chromosome partitioning
ABH09_RS02910	COG1475	DNA binding
ABH09_RS02920	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ABH09_RS02925	COG1418	mRNA catabolic process
ABH09_RS02950	COG2161	toxin-antitoxin pair type II binding
ABH09_RS03040	COG2361	Protein of unknown function DUF86
ABH09_RS03050	COG1487	ribonuclease activity
ABH09_RS03070	COG3549	Plasmid maintenance system killer
ABH09_RS03085	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ABH09_RS03090	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABH09_RS03095	COG5001	Diguanylate cyclase
ABH09_RS03095	COG4251	negative regulation of phosphorylation
ABH09_RS03095	COG3706	GGDEF domain
ABH09_RS03095	COG2203	Gaf domain
ABH09_RS03100	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_RS03105	COG0205	6-phosphofructokinase activity
ABH09_RS03110	COG0124	histidyl-tRNA synthetase
ABH09_RS03120	COG2204	response regulator
ABH09_RS03125	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ABH09_RS03135	COG0840	transmembrane signaling receptor activity
ABH09_RS03180	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_RS03195	COG4786	Flagellar basal body rod
ABH09_RS03205	COG3951	Flagellar rod assembly protein muramidase FlgJ
ABH09_RS03220	COG1120	ATPase activity
ABH09_RS03225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_RS03240	COG2226	methyltransferase
ABH09_RS03255	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ABH09_RS03285	COG0251	oxidation-reduction process
ABH09_RS03300	COG1047	Peptidyl-prolyl cis-trans
ABH09_RS03305	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ABH09_RS03315	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ABH09_RS03330	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ABH09_RS03330	COG1713	HD superfamily hydrolase involved in NAD metabolism
ABH09_RS03350	COG0779	Required for maturation of 30S ribosomal subunits
ABH09_RS03360	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ABH09_RS03365	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ABH09_RS03375	COG0196	riboflavin kinase activity
ABH09_RS03385	COG1185	polyribonucleotide nucleotidyltransferase activity
ABH09_RS03390	COG0756	dUTP diphosphatase activity
ABH09_RS03405	COG0840	transmembrane signaling receptor activity
ABH09_RS03410	COG1253	flavin adenine dinucleotide binding
ABH09_RS03425	COG0840	transmembrane signaling receptor activity
ABH09_RS03440	COG0546	phosphoglycolate phosphatase activity
ABH09_RS03450	COG1609	Transcriptional regulator
ABH09_RS03455	COG1129	ABC transporter
ABH09_RS03475	COG0587	DNA-directed DNA polymerase activity
ABH09_RS03480	COG0762	integral membrane protein
ABH09_RS03495	COG4211	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS03500	COG1129	ABC transporter
ABH09_RS03510	COG1879	ABC-type sugar transport system periplasmic component
ABH09_RS03520	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ABH09_RS03530	COG0826	peptidase U32
ABH09_RS03540	COG4166	transmembrane transport
ABH09_RS03545	COG0601	transmembrane transport
ABH09_RS03550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_RS03555	COG0444	Belongs to the ABC transporter superfamily
ABH09_RS03560	COG4608	Belongs to the ABC transporter superfamily
ABH09_RS03565	COG0616	signal peptide processing
ABH09_RS03605	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ABH09_RS03610	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ABH09_RS03625	COG0322	excinuclease ABC activity
ABH09_RS03645	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
ABH09_RS03675	COG4115	mRNA cleavage
ABH09_RS03690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_RS03700	COG0747	negative chemotaxis
ABH09_RS03710	COG0698	ribose 5-phosphate isomerase
ABH09_RS03725	COG1132	(ABC) transporter
ABH09_RS03740	COG1129	ABC transporter
ABH09_RS03760	COG0456	acetyltransferase
ABH09_RS03760	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ABH09_RS03805	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ABH09_RS03820	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ABH09_RS03825	COG1360	Flagellar Motor Protein
ABH09_RS03830	COG1580	Controls the rotational direction of flagella during chemotaxis
ABH09_RS03835	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_RS03840	COG1776	CheC inhibitor of MCP methylation
ABH09_RS03840	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_RS03850	COG1338	Plays a role in the flagellum-specific transport system
ABH09_RS03855	COG1987	bacterial-type flagellum assembly
ABH09_RS03860	COG1684	flagellar biosynthetic protein fliR
ABH09_RS03865	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABH09_RS03870	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ABH09_RS03875	COG1419	protein localization to endoplasmic reticulum
ABH09_RS03885	COG0534	Mate efflux family protein
ABH09_RS03895	COG0557	exoribonuclease II activity
ABH09_RS03900	COG1362	aminopeptidase activity
ABH09_RS03910	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ABH09_RS03910	COG3608	succinylglutamate desuccinylase aspartoacylase
ABH09_RS03915	COG0525	valine-tRNA ligase activity
ABH09_RS03935	COG2604	Protein of unknown function DUF115
ABH09_RS03960	COG4974	Belongs to the 'phage' integrase family
ABH09_RS03965	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABH09_RS03965	COG0551	DNA topoisomerase type I activity
ABH09_RS03970	COG0758	DNA mediated transformation
ABH09_RS03980	COG0475	glutathione-regulated potassium exporter activity
ABH09_RS03985	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ABH09_RS03990	COG0672	)-iron permease
ABH09_RS03995	COG3470	protein probably involved in high-affinity Fe2 transport
ABH09_RS04010	COG0577	efflux transmembrane transporter activity
ABH09_RS04010	COG1136	(ABC) transporter
ABH09_RS04015	COG1136	(ABC) transporter
ABH09_RS04025	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
ABH09_RS04030	COG3639	organic phosphonate transmembrane transporter activity
ABH09_RS04050	COG1187	pseudouridine synthase activity
ABH09_RS04055	COG0217	transcriptional regulatory protein
ABH09_RS04065	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ABH09_RS04075	COG0813	purine-nucleoside phosphorylase activity
ABH09_RS04185	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ABH09_RS04205	COG1396	sequence-specific DNA binding
ABH09_RS04205	COG3800	Transcriptional regulator
ABH09_RS04235	COG1002	Type II restriction enzyme, methylase subunits
ABH09_RS04245	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
ABH09_RS04320	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ABH09_RS04325	COG0187	DNA topoisomerase II activity
ABH09_RS04335	COG3588	fructose-bisphosphate aldolase
ABH09_RS04340	COG1979	alcohol dehydrogenase
ABH09_RS04345	COG1477	protein flavinylation
ABH09_RS04360	COG1464	Belongs to the NlpA lipoprotein family
ABH09_RS04370	COG0084	hydrolase, TatD family'
ABH09_RS04375	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ABH09_RS04375	COG3116	cell division
ABH09_RS04405	COG0488	(ABC) transporter
ABH09_RS04410	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ABH09_RS04420	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ABH09_RS04425	COG0363	glucosamine-6-phosphate deaminase activity
ABH09_RS04430	COG0628	permease
ABH09_RS04435	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ABH09_RS04440	COG0328	RNA-DNA hybrid ribonuclease activity
ABH09_RS04445	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ABH09_RS04455	COG1175	transmembrane transport
ABH09_RS04460	COG0395	ABC-type sugar transport system, permease component
ABH09_RS04510	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ABH09_RS04510	COG0551	DNA topoisomerase type I activity
ABH09_RS04530	COG4962	Type ii secretion system protein e
ABH09_RS04555	COG3451	type IV secretory pathway VirB4
ABH09_RS04580	COG2948	multi-organism process
ABH09_RS04650	COG2003	Belongs to the UPF0758 family
ABH09_RS04750	COG1484	DNA-dependent DNA replication
ABH09_RS04810	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABH09_RS04815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_RS04860	COG1921	L-seryl-tRNASec selenium transferase activity
ABH09_RS04890	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ABH09_RS04895	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ABH09_RS04900	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ABH09_RS04905	COG0571	ribonuclease III activity
ABH09_RS04910	COG0840	transmembrane signaling receptor activity
ABH09_RS04915	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ABH09_RS04935	COG1773	rubredoxin
ABH09_RS04935	COG0426	domain, Protein
ABH09_RS04940	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABH09_RS04945	COG1960	acyl-CoA dehydrogenase activity
ABH09_RS04950	COG3290	protein histidine kinase activity
ABH09_RS04950	COG3829	transcription factor binding
ABH09_RS04955	COG1024	Enoyl-CoA hydratase
ABH09_RS04960	COG2610	gluconate transmembrane transporter activity
ABH09_RS04970	COG1960	acyl-CoA dehydrogenase activity
ABH09_RS04975	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ABH09_RS04985	COG1157	protein secretion by the type III secretion system
ABH09_RS04990	COG1317	bacterial-type flagellum organization
ABH09_RS05000	COG1766	The M ring may be actively involved in energy transduction
ABH09_RS05015	COG1815	bacterial-type flagellum-dependent cell motility
ABH09_RS05020	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ABH09_RS05025	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ABH09_RS05030	COG3579	cysteine-type endopeptidase activity
ABH09_RS05040	COG4115	mRNA cleavage
ABH09_RS05045	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ABH09_RS05050	COG0166	Belongs to the GPI family
ABH09_RS05055	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ABH09_RS05075	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ABH09_RS05085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ABH09_RS05090	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_RS05090	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_RS05105	COG2304	oxidoreductase activity
ABH09_RS05115	COG0183	Belongs to the thiolase family
ABH09_RS05125	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_RS05125	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_RS05130	COG3842	ATPase activity
ABH09_RS05140	COG0343	queuine tRNA-ribosyltransferase activity
ABH09_RS05160	COG2358	TRAP transporter, solute receptor (TAXI family
ABH09_RS05170	COG0708	Exodeoxyribonuclease III
ABH09_RS05180	COG2832	Protein of unknown function (DUF454)
ABH09_RS05185	COG1137	ATPase activity
ABH09_RS05200	COG0493	'glutamate synthase
ABH09_RS05200	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ABH09_RS05205	COG0402	S-adenosylhomocysteine deaminase activity
ABH09_RS05220	COG1120	ATPase activity
ABH09_RS05225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ABH09_RS05265	COG3620	sequence-specific DNA binding
ABH09_RS05275	COG2189	Belongs to the N(4) N(6)-methyltransferase family
ABH09_RS05280	COG3421	Type III restriction
ABH09_RS05285	COG1509	lysine 2,3-aminomutase activity
ABH09_RS05290	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ABH09_RS05305	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ABH09_RS05310	COG0840	transmembrane signaling receptor activity
ABH09_RS05340	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABH09_RS05345	COG0617	tRNA 3'-terminal CCA addition
ABH09_RS05350	COG2703	oxygen carrier activity
ABH09_RS05355	COG1523	belongs to the glycosyl hydrolase 13 family
ABH09_RS05360	COG2182	Extracellular solute-binding protein
ABH09_RS05375	COG1175	transmembrane transport
ABH09_RS05380	COG3833	ABC-type maltose transport systems, permease component
ABH09_RS05405	COG3118	belongs to the thioredoxin family
ABH09_RS05415	COG2198	Histidine kinase
ABH09_RS05415	COG0643	Histidine kinase
ABH09_RS05420	COG0835	chemotaxis
ABH09_RS05445	COG0731	radical SAM domain protein
ABH09_RS05465	COG0860	N-Acetylmuramoyl-L-alanine amidase
ABH09_RS05485	COG0268	Binds directly to 16S ribosomal RNA
ABH09_RS05490	COG0776	regulation of translation
ABH09_RS05495	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABH09_RS05505	COG1058	Belongs to the CinA family
ABH09_RS05505	COG1546	Belongs to the CinA family
ABH09_RS05510	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ABH09_RS05515	COG0254	rRNA binding
ABH09_RS05520	COG1272	protein, Hemolysin III
ABH09_RS05535	COG1131	(ABC) transporter
ABH09_RS05545	COG4585	Histidine kinase
ABH09_RS05560	COG1136	(ABC) transporter
ABH09_RS05610	COG1129	ABC transporter
ABH09_RS05615	COG0346	lactoylglutathione lyase activity
ABH09_RS05625	COG1881	PFAM PEBP family protein
ABH09_RS05630	COG3340	Belongs to the peptidase S51 family
ABH09_RS05660	COG1733	regulation of RNA biosynthetic process
ABH09_RS05685	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ABH09_RS05685	COG4221	oxidoreductase activity
ABH09_RS05685	COG0604	alcohol dehydrogenase
ABH09_RS05685	COG3321	synthase
ABH09_RS05710	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ABH09_RS05740	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ABH09_RS05750	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ABH09_RS05755	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ABH09_RS05760	COG1136	(ABC) transporter
ABH09_RS05760	COG0577	efflux transmembrane transporter activity
ABH09_RS05765	COG0840	transmembrane signaling receptor activity
ABH09_RS05770	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_RS05775	COG3876	Protein conserved in bacteria
ABH09_RS05785	COG2885	chlorophyll binding
ABH09_RS05790	COG1388	LysM domain
ABH09_RS05790	COG0741	lytic transglycosylase activity
ABH09_RS05815	COG3142	Participates in the control of copper homeostasis
ABH09_RS05835	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ABH09_RS05840	COG0714	Associated with various cellular activities
ABH09_RS05855	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ABH09_RS05865	COG2890	protein-(glutamine-N5) methyltransferase activity
ABH09_RS05870	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ABH09_RS05875	COG0666	response to abiotic stimulus
ABH09_RS05885	COG4213	ABC transporter substrate-binding protein
ABH09_RS05895	COG1172	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS05900	COG1070	Carbohydrate kinase
ABH09_RS05905	COG2115	Belongs to the xylose isomerase family
ABH09_RS05915	COG3330	Domain of unknown function (DUF4912)
ABH09_RS05925	COG0588	phosphoglycerate mutase activity
ABH09_RS05930	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ABH09_RS05960	COG1086	Polysaccharide biosynthesis protein
ABH09_RS05970	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ABH09_RS05975	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ABH09_RS05985	COG0736	holo-[acyl-carrier-protein] synthase activity
ABH09_RS05995	COG0101	tRNA pseudouridine synthase activity
ABH09_RS06000	COG0523	cobalamin synthesis protein
ABH09_RS06005	COG0534	Mate efflux family protein
ABH09_RS06010	COG1522	sequence-specific DNA binding
ABH09_RS06015	COG0436	Aminotransferase
ABH09_RS06020	COG0561	phosphatase activity
ABH09_RS06030	COG4608	Belongs to the ABC transporter superfamily
ABH09_RS06035	COG0601	transmembrane transport
ABH09_RS06040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ABH09_RS06080	COG1268	BioY protein
ABH09_RS06085	COG1122	ATPase activity
ABH09_RS06110	COG0552	protein localization to endoplasmic reticulum
ABH09_RS06120	COG4591	ABC-type transport system involved in lipoprotein release permease component
ABH09_RS06125	COG1136	(ABC) transporter
ABH09_RS06135	COG0142	geranyltranstransferase activity
ABH09_RS06140	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
ABH09_RS06145	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ABH09_RS06250	COG1309	transcriptional regulator
ABH09_RS06255	COG1131	(ABC) transporter
ABH09_RS06420	COG1309	transcriptional regulator
ABH09_RS06425	COG1132	(ABC) transporter
ABH09_RS06430	COG1132	(ABC) transporter
ABH09_RS06435	COG1132	(ABC) transporter
ABH09_RS06440	COG1132	(ABC) transporter
ABH09_RS06455	COG4953	penicillin-binding protein 1C
ABH09_RS06470	COG0724	RNA recognition motif
ABH09_RS06480	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABH09_RS06490	COG1196	nuclear chromosome segregation
ABH09_RS06500	COG0733	neurotransmitter:sodium symporter activity
ABH09_RS06505	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ABH09_RS06510	COG0457	Tetratricopeptide repeat
ABH09_RS06515	COG1704	LemA family
ABH09_RS06530	COG1132	(ABC) transporter
ABH09_RS06545	COG1802	Transcriptional regulator
ABH09_RS06550	COG0632	four-way junction helicase activity
ABH09_RS06555	COG1739	Uncharacterized protein family UPF0029
ABH09_RS06560	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ABH09_RS06565	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ABH09_RS06575	COG0470	DNA polymerase III
ABH09_RS06590	COG0305	Participates in initiation and elongation during chromosome replication
ABH09_RS06595	COG0359	binds to the 23S rRNA
ABH09_RS06600	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ABH09_RS06605	COG0629	single-stranded DNA binding
ABH09_RS06610	COG0360	Binds together with S18 to 16S ribosomal RNA
ABH09_RS06630	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ABH09_RS06635	COG1104	cysteine desulfurase activity
ABH09_RS06650	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ABH09_RS06655	COG2208	phosphoserine phosphatase activity
ABH09_RS06695	COG1230	cation diffusion facilitator family transporter
ABH09_RS06705	COG1321	iron dependent repressor
ABH09_RS06710	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_RS06715	COG1121	(ABC) transporter
ABH09_RS06720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_RS06725	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ABH09_RS06730	COG1683	Conserved Protein
ABH09_RS06740	COG3869	Catalyzes the specific phosphorylation of arginine residues in
ABH09_RS06750	COG3829	transcription factor binding
ABH09_RS06750	COG3290	protein histidine kinase activity
ABH09_RS06775	COG3852	Histidine kinase
ABH09_RS06780	COG2204	response regulator
ABH09_RS06785	COG0823	Involved in the tonB-independent uptake of proteins
ABH09_RS06805	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ABH09_RS06835	COG0149	triose-phosphate isomerase activity
ABH09_RS06840	COG1760	l-serine dehydratase
ABH09_RS06845	COG1760	l-serine dehydratase
ABH09_RS06865	COG3956	TIGRFAM MazG family protein
ABH09_RS06870	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABH09_RS06875	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABH09_RS06880	COG2604	Protein of unknown function DUF115
ABH09_RS06890	COG0405	Gamma-glutamyltransferase
ABH09_RS06910	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ABH09_RS06925	COG1070	Carbohydrate kinase
ABH09_RS06945	COG2388	GCN5-related N-acetyl-transferase
ABH09_RS06970	COG0482	sulfurtransferase activity
ABH09_RS06995	COG0504	CTP synthase activity
ABH09_RS07000	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABH09_RS07000	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABH09_RS07000	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ABH09_RS07020	COG1293	RNA-binding protein homologous to eukaryotic snRNP
ABH09_RS07030	COG1487	ribonuclease activity
ABH09_RS07055	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
ABH09_RS07065	COG0569	domain protein
ABH09_RS07070	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ABH09_RS07085	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABH09_RS07090	COG1067	ATP-dependent peptidase activity
ABH09_RS07100	COG0456	acetyltransferase
ABH09_RS07110	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_RS07130	COG3177	Filamentation induced by cAMP protein fic
ABH09_RS07135	COG1129	ABC transporter
ABH09_RS07145	COG1309	transcriptional regulator
ABH09_RS07160	COG1129	ABC transporter
ABH09_RS07180	COG1309	transcriptional regulator
ABH09_RS07195	COG0750	zinc metalloprotease
ABH09_RS07200	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ABH09_RS07205	COG0575	Belongs to the CDS family
ABH09_RS07210	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ABH09_RS07215	COG0233	cytoplasmic translational termination
ABH09_RS07220	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ABH09_RS07225	COG0052	Belongs to the universal ribosomal protein uS2 family
ABH09_RS07230	COG0424	maF-like protein
ABH09_RS07240	COG0442	prolyl-tRNA aminoacylation
ABH09_RS07255	COG5341	Protein conserved in bacteria
ABH09_RS07260	COG1752	Esterase of the alpha-beta hydrolase superfamily
ABH09_RS07265	COG0835	chemotaxis
ABH09_RS07270	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABH09_RS07275	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ABH09_RS07280	COG0497	DNA recombination
ABH09_RS07330	COG0427	acetyl-CoA hydrolase
ABH09_RS07335	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ABH09_RS07340	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ABH09_RS07365	COG1454	alcohol dehydrogenase
ABH09_RS07380	COG1234	tRNA 3'-trailer cleavage
ABH09_RS07390	COG4254	PFAM FecR protein
ABH09_RS07400	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_RS07405	COG0154	amidase activity
ABH09_RS07410	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_RS07420	COG2211	Major facilitator Superfamily
ABH09_RS07455	COG3681	Belongs to the UPF0597 family
ABH09_RS07460	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
ABH09_RS07470	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ABH09_RS07490	COG1136	(ABC) transporter
ABH09_RS07500	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ABH09_RS07505	COG0193	aminoacyl-tRNA hydrolase activity
ABH09_RS07515	COG0357	Ribosomal RNA small subunit methyltransferase G
ABH09_RS07525	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ABH09_RS07530	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ABH09_RS07560	COG2226	methyltransferase
ABH09_RS07565	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ABH09_RS07580	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ABH09_RS07585	COG0815	Transfers the fatty acyl group on membrane lipoproteins
ABH09_RS07590	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ABH09_RS07605	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ABH09_RS07620	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ABH09_RS07635	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ABH09_RS07640	COG0519	Catalyzes the synthesis of GMP from XMP
ABH09_RS07655	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
ABH09_RS07665	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ABH09_RS07670	COG2885	chlorophyll binding
ABH09_RS07690	COG2373	Large extracellular alpha-helical protein
ABH09_RS07700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ABH09_RS07705	COG0785	Cytochrome C biogenesis protein
ABH09_RS07710	COG0583	DNA-binding transcription factor activity
ABH09_RS07720	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ABH09_RS07730	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ABH09_RS07740	COG1747	RNA polymerase binding
ABH09_RS07740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ABH09_RS07750	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ABH09_RS07770	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ABH09_RS07775	COG0297	glycogen (starch) synthase activity
ABH09_RS07785	COG0791	NLP P60 protein
ABH09_RS07790	COG0318	PFAM AMP-dependent synthetase and ligase
ABH09_RS07795	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ABH09_RS07820	COG4209	transmembrane transport
ABH09_RS07825	COG0395	ABC-type sugar transport system, permease component
ABH09_RS07855	COG0228	four-way junction DNA binding
ABH09_RS07860	COG1837	Belongs to the UPF0109 family
ABH09_RS07865	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ABH09_RS07870	COG0336	Belongs to the RNA methyltransferase TrmD family
ABH09_RS07875	COG0335	large ribosomal subunit rRNA binding
ABH09_RS07910	COG0495	leucyl-tRNA aminoacylation
ABH09_RS07920	COG1773	rubredoxin
ABH09_RS07940	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
ABH09_RS07955	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_RS07965	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABH09_RS07985	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABH09_RS08005	COG2375	cellular response to nickel ion
ABH09_RS08005	COG1132	(ABC) transporter
ABH09_RS08030	COG2801	Transposase and inactivated derivatives
ABH09_RS08115	COG4988	ABC transporter
ABH09_RS08120	COG1132	(ABC) transporter
ABH09_RS08125	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
ABH09_RS08145	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ABH09_RS08155	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ABH09_RS08160	COG0285	dihydrofolate synthase activity
ABH09_RS08165	COG0564	pseudouridine synthase activity
ABH09_RS08205	COG0330	HflC and HflK could
ABH09_RS08210	COG0330	HflC and HflK could
ABH09_RS08225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABH09_RS08255	COG0455	bacterial-type flagellum organization
ABH09_RS08265	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
ABH09_RS08275	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ABH09_RS08305	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ABH09_RS08305	COG0302	gtp cyclohydrolase
ABH09_RS08310	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ABH09_RS08315	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ABH09_RS08330	COG0564	pseudouridine synthase activity
ABH09_RS08340	COG3735	TraB family
ABH09_RS08345	COG2001	Belongs to the MraZ family
ABH09_RS08350	COG0275	rRNA processing
ABH09_RS08360	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ABH09_RS08365	COG0772	Belongs to the SEDS family
ABH09_RS08370	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ABH09_RS08380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ABH09_RS08390	COG1301	dicarboxylic acid transport
ABH09_RS08400	COG1136	(ABC) transporter
ABH09_RS08425	COG1136	(ABC) transporter
ABH09_RS08425	COG0577	efflux transmembrane transporter activity
ABH09_RS08440	COG0534	Mate efflux family protein
ABH09_RS08445	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
ABH09_RS08455	COG1309	transcriptional regulator
ABH09_RS08460	COG1620	l-lactate permease
ABH09_RS08465	COG4166	transmembrane transport
ABH09_RS08475	COG0395	ABC-type sugar transport system, permease component
ABH09_RS08480	COG1175	transmembrane transport
ABH09_RS08485	COG1653	transport
ABH09_RS08500	COG2971	BadF BadG BcrA BcrD
ABH09_RS08505	COG4886	Leucine-rich repeat (LRR) protein
ABH09_RS08515	COG2233	PERMEase
ABH09_RS08535	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ABH09_RS08575	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ABH09_RS08590	COG1653	transport
ABH09_RS08620	COG0116	Belongs to the methyltransferase superfamily
ABH09_RS08620	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ABH09_RS08625	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ABH09_RS08630	COG1413	lyase activity
ABH09_RS08645	COG1482	cell wall glycoprotein biosynthetic process
ABH09_RS08650	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ABH09_RS08655	COG1573	uracil-dna glycosylase
ABH09_RS08675	COG1131	(ABC) transporter
ABH09_RS08680	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ABH09_RS08685	COG0563	adenylate kinase activity
ABH09_RS08695	COG0772	Belongs to the SEDS family
ABH09_RS08700	COG0768	penicillin binding
ABH09_RS08715	COG1077	Cell shape determining protein MreB Mrl
ABH09_RS08735	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ABH09_RS08740	COG0358	DNA primase activity
ABH09_RS08745	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ABH09_RS08765	COG3189	MarR family transcriptional regulator
ABH09_RS08805	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ABH09_RS08805	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ABH09_RS08810	COG3118	belongs to the thioredoxin family
ABH09_RS08815	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ABH09_RS08835	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ABH09_RS08855	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ABH09_RS08865	COG0528	UMP kinase activity
ABH09_RS08870	COG1305	Transglutaminase-like
ABH09_RS08885	COG0215	cysteine-tRNA ligase activity
ABH09_RS08890	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ABH09_RS08895	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ABH09_RS08910	COG2201	protein-glutamate methylesterase activity
ABH09_RS08950	COG0126	phosphoglycerate kinase activity
ABH09_RS08960	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ABH09_RS08990	COG1619	proteins homologs of microcin C7 resistance protein MccF
ABH09_RS09015	COG2801	Transposase and inactivated derivatives
ABH09_RS09020	COG1401	restriction endodeoxyribonuclease activity
ABH09_RS09050	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_RS09050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_RS09055	COG1283	sodium-dependent phosphate transmembrane transporter activity
ABH09_RS09060	COG0318	PFAM AMP-dependent synthetase and ligase
ABH09_RS09070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ABH09_RS09075	COG0426	domain, Protein
ABH09_RS09075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ABH09_RS09105	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ABH09_RS09110	COG1480	7TM receptor with intracellular HD hydrolase
ABH09_RS09130	COG0494	nUDIX hydrolase
ABH09_RS09135	COG0840	transmembrane signaling receptor activity
ABH09_RS09150	COG0735	belongs to the Fur family
ABH09_RS09165	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ABH09_RS09170	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
ABH09_RS09175	COG1924	4 iron, 4 sulfur cluster binding
ABH09_RS09180	COG0786	glutamate:sodium symporter activity
ABH09_RS09185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ABH09_RS09190	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ABH09_RS09195	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ABH09_RS09200	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
ABH09_RS09215	COG0786	glutamate:sodium symporter activity
ABH09_RS09220	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ABH09_RS09225	COG0840	transmembrane signaling receptor activity
ABH09_RS09240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_RS09245	COG0457	Tetratricopeptide repeat
ABH09_RS09250	COG0037	tRNA processing
ABH09_RS09255	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ABH09_RS09265	COG2088	sporulation resulting in formation of a cellular spore
ABH09_RS09275	COG0537	adenosine 5'-monophosphoramidase activity
ABH09_RS09285	COG0737	Belongs to the 5'-nucleotidase family
ABH09_RS09305	COG0514	ATP-dependent DNA helicase (RecQ)
ABH09_RS09315	COG0840	transmembrane signaling receptor activity
ABH09_RS09320	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABH09_RS09335	COG0534	Mate efflux family protein
ABH09_RS09340	COG1309	transcriptional regulator
ABH09_RS09355	COG0488	(ABC) transporter
ABH09_RS09375	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ABH09_RS09390	COG0049	tRNA binding
ABH09_RS09405	COG0085	RNA polymerase activity
ABH09_RS09410	COG0222	ribosome binding
ABH09_RS09415	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ABH09_RS09420	COG0081	regulation of translation
ABH09_RS09425	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
ABH09_RS09430	COG0250	Participates in transcription elongation, termination and antitermination
ABH09_RS09435	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ABH09_RS09445	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ABH09_RS09460	COG1438	arginine binding
ABH09_RS09465	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ABH09_RS09490	COG0301	tRNA thio-modification
ABH09_RS09500	COG2502	aspartate--ammonia ligase
ABH09_RS09530	COG0739	heme binding
ABH09_RS09545	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ABH09_RS09555	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ABH09_RS09560	COG2911	Protein conserved in bacteria
ABH09_RS09565	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ABH09_RS09575	COG0739	heme binding
ABH09_RS09590	COG1774	PSP1 C-terminal conserved region
ABH09_RS09610	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ABH09_RS09615	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
ABH09_RS09620	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ABH09_RS09630	COG0427	acetyl-CoA hydrolase
ABH09_RS09635	COG1024	Enoyl-CoA hydratase
ABH09_RS09640	COG1250	3-hydroxyacyl-CoA dehydrogenase
ABH09_RS09645	COG1309	transcriptional regulator
ABH09_RS09650	COG0574	Belongs to the PEP-utilizing enzyme family
ABH09_RS09650	COG3848	Pyruvate phosphate dikinase
ABH09_RS09660	COG0668	transmembrane transport
ABH09_RS09665	COG1840	ABC-type Fe3 transport system, periplasmic component
ABH09_RS09670	COG3842	ATPase activity
ABH09_RS09680	COG1737	Transcriptional regulator
ABH09_RS09685	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ABH09_RS09690	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ABH09_RS09695	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ABH09_RS09700	COG0284	orotidine-5'-phosphate decarboxylase activity
ABH09_RS09705	COG0167	dihydroorotate dehydrogenase activity
ABH09_RS09710	COG0543	2 iron, 2 sulfur cluster binding
ABH09_RS09715	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
ABH09_RS09720	COG0540	Belongs to the ATCase OTCase family
ABH09_RS09740	COG1132	(ABC) transporter
ABH09_RS09740	COG2375	cellular response to nickel ion
ABH09_RS09745	COG0500	methyltransferase
ABH09_RS09755	COG1132	(ABC) transporter
ABH09_RS09760	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
ABH09_RS09765	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
ABH09_RS09795	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS09800	COG4603	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS09805	COG3845	ABC transporter
ABH09_RS09810	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_RS09815	COG0840	transmembrane signaling receptor activity
ABH09_RS09820	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
ABH09_RS09845	COG0709	Synthesizes selenophosphate from selenide and ATP
ABH09_RS09850	COG0556	nucleotide-excision repair
ABH09_RS09855	COG0740	serine-type endopeptidase activity
ABH09_RS09880	COG0681	Belongs to the peptidase S26 family
ABH09_RS09885	COG0840	transmembrane signaling receptor activity
ABH09_RS09920	COG0300	oxidoreductase activity
ABH09_RS09930	COG2887	Belongs to the helicase family. UvrD subfamily
ABH09_RS09965	COG1960	acyl-CoA dehydrogenase activity
ABH09_RS09970	COG1012	belongs to the aldehyde dehydrogenase family
ABH09_RS09980	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ABH09_RS09995	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
ABH09_RS10015	COG2770	Histidine kinase
ABH09_RS10015	COG3437	response regulator, receiver
ABH09_RS10020	COG1214	PFAM Peptidase M22, glycoprotease
ABH09_RS10025	COG0802	atpase or kinase
ABH09_RS10030	COG0564	pseudouridine synthase activity
ABH09_RS10040	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ABH09_RS10055	COG0297	glycogen (starch) synthase activity
ABH09_RS10075	COG1966	Carbon starvation protein
ABH09_RS10080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_RS10085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ABH09_RS10095	COG1079	Belongs to the binding-protein-dependent transport system permease family
ABH09_RS10105	COG3845	ABC transporter
ABH09_RS10110	COG1744	ABC transporter substrate-binding protein PnrA-like
ABH09_RS10120	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ABH09_RS10125	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ABH09_RS10135	COG1570	exodeoxyribonuclease VII activity
ABH09_RS10160	COG0719	Fe-S assembly protein
ABH09_RS10170	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ABH09_RS10175	COG1692	metallophosphoesterase
ABH09_RS10180	COG3118	belongs to the thioredoxin family
ABH09_RS10190	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
ABH09_RS10205	COG1653	transport
ABH09_RS10210	COG1175	transmembrane transport
ABH09_RS10215	COG0395	ABC-type sugar transport system, permease component
ABH09_RS10220	COG1027	Aspartate ammonia-lyase
ABH09_RS10225	COG0295	cytidine deaminase activity
ABH09_RS10235	COG0739	heme binding
ABH09_RS10260	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ABH09_RS10275	COG3876	Protein conserved in bacteria
ABH09_RS10280	COG2239	Acts as a magnesium transporter
ABH09_RS10285	COG0170	dolichyl monophosphate biosynthetic process
ABH09_RS10295	COG2252	PERMEase
ABH09_RS10305	COG1132	(ABC) transporter
ABH09_RS10310	COG2375	cellular response to nickel ion
ABH09_RS10310	COG1132	(ABC) transporter
ABH09_RS10320	COG1487	ribonuclease activity
ABH09_RS10330	COG1309	transcriptional regulator
ABH09_RS10335	COG0617	tRNA 3'-terminal CCA addition
ABH09_RS10335	COG0617	tRNA 3'-terminal CCA addition
ABH09_RS10355	COG1205	dead DEAH box helicase
ABH09_RS10355	COG1111	helicase
ABH09_RS10380	COG0484	heat shock protein binding
ABH09_RS10385	COG0443	Heat shock 70 kDa protein
ABH09_RS10390	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ABH09_RS10405	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ABH09_RS10425	COG1609	Transcriptional regulator
ABH09_RS10440	COG0395	ABC-type sugar transport system, permease component
ABH09_RS10450	COG3250	beta-galactosidase activity
ABH09_RS10460	COG0395	ABC-type sugar transport system, permease component
ABH09_RS10465	COG1175	transmembrane transport
ABH09_RS10475	COG0840	transmembrane signaling receptor activity
ABH09_RS10480	COG2195	Cleaves the N-terminal amino acid of tripeptides
ABH09_RS10490	COG0674	pyruvate-flavodoxin oxidoreductase activity
ABH09_RS10490	COG1013	pyruvate-flavodoxin oxidoreductase activity
ABH09_RS10490	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
ABH09_RS10490	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ABH09_RS10505	COG3842	ATPase activity
ABH09_RS10510	COG0483	inositol monophosphate 1-phosphatase activity
ABH09_RS10525	COG4585	Histidine kinase
ABH09_RS10570	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ABH09_RS10575	COG1715	Restriction endonuclease
ABH09_RS10600	COG1309	transcriptional regulator
ABH09_RS10615	COG1129	ABC transporter
ABH09_RS10645	COG1846	Transcriptional regulator
ABH09_RS10670	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ABH09_RS10695	COG1390	Produces ATP from ADP in the presence of a proton gradient across the membrane
ABH09_RS10705	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
ABH09_RS10710	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
ABH09_RS10715	COG1394	ATPase activity, coupled to movement of substances
ABH09_RS10720	COG1269	ATP hydrolysis coupled proton transport
ABH09_RS10755	COG3290	protein histidine kinase activity
ABH09_RS10755	COG0840	transmembrane signaling receptor activity
ABH09_RS10780	COG1199	ATP-dependent helicase activity
ABH09_RS10790	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ABH09_RS10800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ABH09_RS10815	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ABH09_RS10820	COG0747	negative chemotaxis
ABH09_RS10855	COG1733	regulation of RNA biosynthetic process
ABH09_RS10895	COG2207	Transcriptional regulator
ABH09_RS10895	COG3708	Transcriptional regulator
ABH09_RS10905	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ABH09_RS10910	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ABH09_RS10915	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ABH09_RS10920	COG0402	S-adenosylhomocysteine deaminase activity
ABH09_RS10980	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ABH09_RS10985	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ABH09_RS10995	COG0457	Tetratricopeptide repeat
ABH09_RS11000	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ABH09_RS11050	COG1254	Belongs to the acylphosphatase family
ABH09_RS11070	COG1193	negative regulation of DNA recombination
ABH09_RS11085	COG0433	COG0433 Predicted ATPase
ABH09_RS11090	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ABH09_RS11095	COG1722	exodeoxyribonuclease VII activity
ABH09_RS11210	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
ABH09_RS11220	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ABH09_RS11245	COG0793	Belongs to the peptidase S41A family
ABH09_RS11275	COG0203	ribosomal protein L17
ABH09_RS11280	COG0202	RNA polymerase activity
ABH09_RS11285	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ABH09_RS11295	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ABH09_RS11305	COG0200	Binds to the 23S rRNA
ABH09_RS11315	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ABH09_RS11325	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ABH09_RS11330	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ABH09_RS11340	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ABH09_RS11345	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ABH09_RS11350	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ABH09_RS11355	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ABH09_RS11360	COG0255	Belongs to the universal ribosomal protein uL29 family
ABH09_RS11370	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ABH09_RS11375	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ABH09_RS11385	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ABH09_RS11390	COG0089	rRNA binding
ABH09_RS11395	COG0088	Forms part of the polypeptide exit tunnel
ABH09_RS11400	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ABH09_RS11405	COG0051	transcription antitermination factor activity, RNA binding
ABH09_RS11410	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ABH09_RS11425	COG0521	Mo-molybdopterin cofactor biosynthetic process
ABH09_RS11430	COG0725	ABC transporter, periplasmic molybdate-binding protein
ABH09_RS11435	COG4149	molybdate abc transporter
ABH09_RS11470	COG0741	lytic transglycosylase activity
ABH09_RS11475	COG1968	undecaprenyl-diphosphatase activity
ABH09_RS11480	COG1674	ftsk spoiiie
ABH09_RS11505	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ABH09_RS11510	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ABH09_RS11515	COG0084	hydrolase, TatD family'
ABH09_RS11525	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ABH09_RS11615	COG0714	Associated with various cellular activities
ABH09_RS11625	COG0826	peptidase U32
ABH09_RS11635	COG0822	iron-sulfur transferase activity
ABH09_RS11640	COG0564	pseudouridine synthase activity
ABH09_RS11645	COG2255	four-way junction helicase activity
ABH09_RS11655	COG0445	tRNA wobble uridine modification
ABH09_RS11665	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ABH09_RS11680	COG1695	Transcriptional regulator
ABH09_RS11690	COG1983	PspC domain protein
ABH09_RS11740	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ABH09_RS11740	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_RS11740	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ABH09_RS11750	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ABH09_RS11755	COG1640	4-alpha-glucanotransferase
ABH09_RS11770	COG4452	Inner membrane protein CreD
ABH09_RS11775	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ABH09_RS11790	COG0840	transmembrane signaling receptor activity
ABH09_RS11795	COG4443	Transcriptional Coactivator p15 (PC4)
ABH09_RS11870	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ABH09_RS11880	COG0419	ATPase involved in DNA repair
ABH09_RS11885	COG0419	ATPase involved in DNA repair
ABH09_RS11890	COG0420	3'-5' exonuclease activity
ABH09_RS11895	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_RS11960	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABH09_RS11960	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABH09_RS11965	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABH09_RS11965	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABH09_RS11970	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABH09_RS11970	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABH09_RS12010	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ABH09_RS12090	COG0419	ATPase involved in DNA repair
ABH09_RS12095	COG0419	ATPase involved in DNA repair
ABH09_RS12100	COG0419	ATPase involved in DNA repair
ABH09_RS12115	COG0420	3'-5' exonuclease activity
ABH09_RS12120	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_RS12125	COG0803	Belongs to the bacterial solute-binding protein 9 family
ABH09_RS12190	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ABH09_RS12190	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ABH09_RS12195	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_RS12200	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ABH09_RS12220	COG1151	hydroxylamine reductase activity
ABH09_RS12240	COG0280	phosphate acetyltransferase
ABH09_RS12245	COG0492	ferredoxin-NADP+ reductase activity
ABH09_RS12250	COG1472	Belongs to the glycosyl hydrolase 3 family
ABH09_RS12255	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
ABH09_RS12265	COG0237	dephospho-CoA kinase activity
ABH09_RS12275	COG0739	heme binding
ABH09_RS12285	COG1114	Component of the transport system for branched-chain amino acids
ABH09_RS12290	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ABH09_RS12295	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ABH09_RS12325	COG1177	transmembrane transport
ABH09_RS12355	COG0811	peptide transport
ABH09_RS12360	COG0848	biopolymer transport protein
ABH09_RS12385	COG1176	ABC-type spermidine putrescine transport system, permease component I
ABH09_RS12390	COG3842	ATPase activity
ABH09_RS12395	COG0116	Belongs to the methyltransferase superfamily
ABH09_RS12400	COG0701	Predicted permease
ABH09_RS12470	COG0012	GTP binding
ABH09_RS12475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ABH09_RS12485	COG0071	Belongs to the small heat shock protein (HSP20) family
ABH09_RS12490	COG0019	diaminopimelate decarboxylase activity
ABH09_RS12495	COG0716	FMN binding
ABH09_RS12505	COG1956	GAF domain-containing protein
ABH09_RS12515	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ABH09_RS12520	COG1136	(ABC) transporter
ABH09_RS12525	COG0577	efflux transmembrane transporter activity
ABH09_RS12525	COG1136	(ABC) transporter
ABH09_RS12530	COG0577	efflux transmembrane transporter activity
ABH09_RS12530	COG1136	(ABC) transporter
ABH09_RS12535	COG0840	transmembrane signaling receptor activity
ABH09_RS12540	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ABH09_RS12545	COG0423	glycine-tRNA ligase activity
ABH09_RS12555	COG0584	glycerophosphoryl diester phosphodiesterase
ABH09_RS12560	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ABH09_RS12560	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ABH09_RS12570	COG0205	6-phosphofructokinase activity
ABH09_RS12575	COG0517	IMP dehydrogenase activity
ABH09_RS12575	COG0516	GMP reductase activity
ABH09_RS12585	COG1028	Short-chain dehydrogenase reductase Sdr
ABH09_RS12590	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
ABH09_RS12595	COG2204	response regulator
ABH09_RS12605	COG3177	Filamentation induced by cAMP protein fic
ABH09_RS12640	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ABH09_RS12665	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ABH09_RS12670	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ABH09_RS12690	COG1686	Belongs to the peptidase S11 family
ABH09_RS12695	COG0739	heme binding
ABH09_RS12700	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABH09_RS12730	COG1881	PFAM PEBP family protein
ABH09_RS12735	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ABH09_RS12740	COG0545	Peptidyl-prolyl cis-trans isomerase
ABH09_RS12790	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ABH09_RS12820	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ABH09_RS12825	COG0592	DNA-directed DNA polymerase activity
ABH09_RS12830	COG2089	acid synthase
ABH09_RS12845	COG4750	Nucleotidyl transferase
ABH09_RS12850	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ABH09_RS12855	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities