locus-tag class description TRESU_RS00005 PF11638 DnaA N-terminal domain TRESU_RS00005 PF00308 Bacterial dnaA protein TRESU_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix TRESU_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain TRESU_RS00010 PF02767 DNA polymerase III beta subunit, central domain TRESU_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain TRESU_RS00015 PF02463 RecF/RecN/SMC N terminal domain TRESU_RS00025 PF00468 Ribosomal protein L34 TRESU_RS00030 PF00825 Ribonuclease P TRESU_RS00035 PF01809 Putative membrane protein insertion efficiency factor TRESU_RS00040 PF02096 60Kd inner membrane protein TRESU_RS00040 PF14849 YidC periplasmic domain TRESU_RS00045 PF01424 R3H domain TRESU_RS00045 PF14804 Jag N-terminus TRESU_RS00055 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD TRESU_RS00070 PF00155 Aminotransferase class I and II TRESU_RS00070 PF00392 Bacterial regulatory proteins, gntR family TRESU_RS00075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TRESU_RS00080 PF01985 CRS1 / YhbY (CRM) domain TRESU_RS00095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TRESU_RS00095 PF00117 Glutamine amidotransferase class-I TRESU_RS00100 PF02142 MGS-like domain TRESU_RS00100 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TRESU_RS00100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TRESU_RS00130 PF00005 ABC transporter TRESU_RS00135 PF03853 YjeF-related protein N-terminus TRESU_RS00135 PF01256 Carbohydrate kinase TRESU_RS00140 PF03788 LrgA family TRESU_RS00145 PF04172 LrgB-like family TRESU_RS00150 PF00696 Amino acid kinase family TRESU_RS00155 PF03807 NADP oxidoreductase coenzyme F420-dependent TRESU_RS00155 PF14748 Pyrroline-5-carboxylate reductase dimerisation TRESU_RS00165 PF01554 MatE TRESU_RS00170 PF00691 OmpA family TRESU_RS00170 PF13488 Glycine zipper TRESU_RS00175 PF01451 Low molecular weight phosphotyrosine protein phosphatase TRESU_RS00180 PF03466 LysR substrate binding domain TRESU_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TRESU_RS00185 PF01053 Cys/Met metabolism PLP-dependent enzyme TRESU_RS00190 PF01680 SOR/SNZ family TRESU_RS00195 PF01174 SNO glutamine amidotransferase family TRESU_RS00200 PF13091 PLD-like domain TRESU_RS00205 PF02769 AIR synthase related protein, C-terminal domain TRESU_RS00205 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TRESU_RS00205 PF00586 AIR synthase related protein, N-terminal domain TRESU_RS00215 PF03471 Transporter associated domain TRESU_RS00215 PF00571 CBS domain TRESU_RS00215 PF01595 Cyclin M transmembrane N-terminal domain TRESU_RS00220 PF00571 CBS domain TRESU_RS00220 PF03471 Transporter associated domain TRESU_RS00220 PF01595 Cyclin M transmembrane N-terminal domain TRESU_RS00230 PF00849 RNA pseudouridylate synthase TRESU_RS00235 PF00005 ABC transporter TRESU_RS00240 PF01032 FecCD transport family TRESU_RS00250 PF00156 Phosphoribosyl transferase domain TRESU_RS00255 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TRESU_RS00255 PF06165 Glycosyltransferase family 36 TRESU_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS00275 PF04616 Glycosyl hydrolases family 43 TRESU_RS00275 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TRESU_RS00280 PF00356 Bacterial regulatory proteins, lacI family TRESU_RS00290 PF02575 YbaB/EbfC DNA-binding family TRESU_RS00295 PF02132 RecR protein TRESU_RS00295 PF13662 Toprim domain TRESU_RS00310 PF16491 CAAX prenyl protease N-terminal, five membrane helices TRESU_RS00310 PF01435 Peptidase family M48 TRESU_RS00315 PF02527 rRNA small subunit methyltransferase G TRESU_RS00330 PF01430 Hsp33 protein TRESU_RS00335 PF03572 Peptidase family S41 TRESU_RS00335 PF01471 Putative peptidoglycan binding domain TRESU_RS00335 PF17820 PDZ domain TRESU_RS00340 PF04452 RNA methyltransferase TRESU_RS00355 PF00588 SpoU rRNA Methylase family TRESU_RS00365 PF00815 Histidinol dehydrogenase TRESU_RS00370 PF01327 Polypeptide deformylase TRESU_RS00375 PF00551 Formyl transferase TRESU_RS00375 PF02911 Formyl transferase, C-terminal domain TRESU_RS00385 PF00871 Acetokinase family TRESU_RS00395 PF00005 ABC transporter TRESU_RS00405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TRESU_RS00405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TRESU_RS00410 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain TRESU_RS00410 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain TRESU_RS00415 PF06968 Biotin and Thiamin Synthesis associated domain TRESU_RS00415 PF04055 Radical SAM superfamily TRESU_RS00420 PF02361 Cobalt transport protein TRESU_RS00425 PF00005 ABC transporter TRESU_RS00430 PF02632 BioY family TRESU_RS00445 PF03466 LysR substrate binding domain TRESU_RS00445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TRESU_RS00475 PF00892 EamA-like transporter family TRESU_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRESU_RS00480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TRESU_RS00485 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TRESU_RS00485 PF00175 Oxidoreductase NAD-binding domain TRESU_RS00505 PF02308 MgtC family TRESU_RS00525 PF05872 Bacterial protein of unknown function (DUF853) TRESU_RS00530 PF01554 MatE TRESU_RS00550 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS00550 PF01548 Transposase TRESU_RS00570 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS00575 PF01609 Transposase DDE domain TRESU_RS00575 PF13808 DDE_Tnp_1-associated TRESU_RS00610 PF16326 ABC transporter C-terminal domain TRESU_RS00610 PF12848 ABC transporter TRESU_RS00610 PF00005 ABC transporter TRESU_RS00615 PF02146 Sir2 family TRESU_RS00635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TRESU_RS00635 PF02896 PEP-utilising enzyme, TIM barrel domain TRESU_RS00635 PF00391 PEP-utilising enzyme, mobile domain TRESU_RS00640 PF01381 Helix-turn-helix TRESU_RS00640 PF06114 IrrE N-terminal-like domain TRESU_RS00640 PF09856 Predicted transcriptional regulator (DUF2083) TRESU_RS00670 PF00011 Hsp20/alpha crystallin family TRESU_RS00680 PF01048 Phosphorylase superfamily TRESU_RS00685 PF13537 Glutamine amidotransferase domain TRESU_RS00685 PF00733 Asparagine synthase TRESU_RS00695 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 TRESU_RS00695 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) TRESU_RS00710 PF12169 DNA polymerase III subunits gamma and tau domain III TRESU_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS00730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRESU_RS00730 PF00005 ABC transporter TRESU_RS00735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TRESU_RS00735 PF00005 ABC transporter TRESU_RS00745 PF03477 ATP cone domain TRESU_RS00745 PF13597 Anaerobic ribonucleoside-triphosphate reductase TRESU_RS00825 PF00501 AMP-binding enzyme TRESU_RS00825 PF13193 AMP-binding enzyme C-terminal domain TRESU_RS00830 PF00118 TCP-1/cpn60 chaperonin family TRESU_RS00835 PF02901 Pyruvate formate lyase-like TRESU_RS00835 PF01228 Glycine radical TRESU_RS00845 PF03372 Endonuclease/Exonuclease/phosphatase family TRESU_RS00855 PF04055 Radical SAM superfamily TRESU_RS00870 PF07687 Peptidase dimerisation domain TRESU_RS00870 PF01546 Peptidase family M20/M25/M40 TRESU_RS00875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TRESU_RS00880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRESU_RS00880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRESU_RS00880 PF03129 Anticodon binding domain TRESU_RS00890 PF00877 NlpC/P60 family TRESU_RS00895 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase TRESU_RS00895 PF07055 Enoyl reductase FAD binding domain TRESU_RS00895 PF12241 Trans-2-enoyl-CoA reductase catalytic region TRESU_RS00900 PF03422 Carbohydrate binding module (family 6) TRESU_RS00900 PF00404 Dockerin type I domain TRESU_RS00900 PF00756 Putative esterase TRESU_RS00900 PF00331 Glycosyl hydrolase family 10 TRESU_RS00910 PF00356 Bacterial regulatory proteins, lacI family TRESU_RS00915 PF02677 Epoxyqueuosine reductase QueH TRESU_RS00925 PF00781 Diacylglycerol kinase catalytic domain TRESU_RS00940 PF01926 50S ribosome-binding GTPase TRESU_RS00940 PF12631 MnmE helical domain TRESU_RS00940 PF10396 GTP-binding protein TrmE N-terminus TRESU_RS00960 PF07733 Bacterial DNA polymerase III alpha NTPase domain TRESU_RS00960 PF02811 PHP domain TRESU_RS00960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TRESU_RS00960 PF14579 Helix-hairpin-helix motif TRESU_RS00965 PF00520 Ion transport protein TRESU_RS00965 PF00027 Cyclic nucleotide-binding domain TRESU_RS00970 PF01613 Flavin reductase like domain TRESU_RS00975 PF01202 Shikimate kinase TRESU_RS00980 PF01734 Patatin-like phospholipase TRESU_RS00990 PF16921 Tex protein YqgF-like domain TRESU_RS00990 PF09371 Tex-like protein N-terminal domain TRESU_RS00990 PF00575 S1 RNA binding domain TRESU_RS00990 PF17674 HHH domain TRESU_RS01020 PF01420 Type I restriction modification DNA specificity domain TRESU_RS01030 PF07693 KAP family P-loop domain TRESU_RS01050 PF02661 Fic/DOC family TRESU_RS01050 PF13784 Fic/DOC family N-terminal TRESU_RS01055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS01055 PF18766 SWI2/SNF2 ATPase TRESU_RS01055 PF11867 Domain of unknown function (DUF3387) TRESU_RS01060 PF02535 ZIP Zinc transporter TRESU_RS01070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TRESU_RS01075 PF00873 AcrB/AcrD/AcrF family TRESU_RS01085 PF00117 Glutamine amidotransferase class-I TRESU_RS01085 PF06418 CTP synthase N-terminus TRESU_RS01095 PF00120 Glutamine synthetase, catalytic domain TRESU_RS01095 PF03951 Glutamine synthetase, beta-Grasp domain TRESU_RS01100 PF18318 Glutamine synthetase C-terminal domain TRESU_RS01100 PF12437 Glutamine synthetase type III N terminal TRESU_RS01100 PF00120 Glutamine synthetase, catalytic domain TRESU_RS01110 PF00535 Glycosyl transferase family 2 TRESU_RS01110 PF01501 Glycosyl transferase family 8 TRESU_RS01115 PF00909 Ammonium Transporter Family TRESU_RS01130 PF13173 AAA domain TRESU_RS01130 PF13635 Domain of unknown function (DUF4143) TRESU_RS01140 PF07804 HipA-like C-terminal domain TRESU_RS01140 PF13657 HipA N-terminal domain TRESU_RS01145 PF01381 Helix-turn-helix TRESU_RS01155 PF00672 HAMP domain TRESU_RS01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS01155 PF06580 Histidine kinase TRESU_RS01155 PF02743 Cache domain TRESU_RS01160 PF12833 Helix-turn-helix domain TRESU_RS01160 PF01497 Periplasmic binding protein TRESU_RS01165 PF13407 Periplasmic binding protein domain TRESU_RS01170 PF17863 AAA lid domain TRESU_RS01170 PF07726 ATPase family associated with various cellular activities (AAA) TRESU_RS01175 PF01882 Protein of unknown function DUF58 TRESU_RS01185 PF00092 von Willebrand factor type A domain TRESU_RS01205 PF00684 DnaJ central domain TRESU_RS01205 PF01556 DnaJ C terminal domain TRESU_RS01205 PF00226 DnaJ domain TRESU_RS01210 PF00075 RNase H TRESU_RS01220 PF13167 GTP-binding GTPase N-terminal TRESU_RS01220 PF01926 50S ribosome-binding GTPase TRESU_RS01220 PF16360 GTP-binding GTPase Middle Region TRESU_RS01240 PF12392 Collagenase TRESU_RS01240 PF01136 Peptidase family U32 TRESU_RS01320 PF08267 Cobalamin-independent synthase, N-terminal domain TRESU_RS01320 PF01717 Cobalamin-independent synthase, Catalytic domain TRESU_RS01330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TRESU_RS01330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TRESU_RS01340 PF00171 Aldehyde dehydrogenase family TRESU_RS01345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TRESU_RS01345 PF03484 tRNA synthetase B5 domain TRESU_RS01465 PF00436 Single-strand binding protein family TRESU_RS01480 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS01490 PF00206 Lyase TRESU_RS01490 PF10397 Adenylosuccinate lyase C-terminus TRESU_RS01495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TRESU_RS01510 PF18693 TRAM domain TRESU_RS01510 PF00919 Uncharacterized protein family UPF0004 TRESU_RS01510 PF04055 Radical SAM superfamily TRESU_RS01515 PF13361 UvrD-like helicase C-terminal domain TRESU_RS01515 PF00580 UvrD/REP helicase N-terminal domain TRESU_RS01520 PF02424 ApbE family TRESU_RS01525 PF00209 Sodium:neurotransmitter symporter family TRESU_RS01580 PF07669 Eco57I restriction-modification methylase TRESU_RS01580 PF12950 TaqI-like C-terminal specificity domain TRESU_RS01585 PF00239 Resolvase, N terminal domain TRESU_RS01585 PF02796 Helix-turn-helix domain of resolvase TRESU_RS01625 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment TRESU_RS01625 PF01297 Zinc-uptake complex component A periplasmic TRESU_RS01630 PF02557 D-alanyl-D-alanine carboxypeptidase TRESU_RS01635 PF00005 ABC transporter TRESU_RS01715 PF01661 Macro domain TRESU_RS01720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TRESU_RS01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase TRESU_RS01725 PF00310 Glutamine amidotransferases class-II TRESU_RS01725 PF04898 Glutamate synthase central domain TRESU_RS01725 PF01493 GXGXG motif TRESU_RS01725 PF01645 Conserved region in glutamate synthase TRESU_RS01740 PF00365 Phosphofructokinase TRESU_RS01755 PF00588 SpoU rRNA Methylase family TRESU_RS01755 PF08032 RNA 2'-O ribose methyltransferase substrate binding TRESU_RS01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS01765 PF00672 HAMP domain TRESU_RS01765 PF17200 Single Cache domain 2 TRESU_RS01780 PF04073 Aminoacyl-tRNA editing domain TRESU_RS01780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRESU_RS01780 PF03129 Anticodon binding domain TRESU_RS01785 PF02561 Flagellar protein FliS TRESU_RS01800 PF00986 DNA gyrase B subunit, carboxyl terminus TRESU_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS01800 PF01751 Toprim domain TRESU_RS01800 PF00204 DNA gyrase B TRESU_RS01805 PF00521 DNA gyrase/topoisomerase IV, subunit A TRESU_RS01815 PF01205 Uncharacterized protein family UPF0029 TRESU_RS01815 PF09186 Domain of unknown function (DUF1949) TRESU_RS01865 PF08463 EcoEI R protein C-terminal TRESU_RS01865 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS01865 PF00271 Helicase conserved C-terminal domain TRESU_RS01865 PF04851 Type III restriction enzyme, res subunit TRESU_RS01870 PF03129 Anticodon binding domain TRESU_RS01870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRESU_RS01875 PF00248 Aldo/keto reductase family TRESU_RS01905 PF00905 Penicillin binding protein transpeptidase domain TRESU_RS01905 PF03717 Penicillin-binding Protein dimerisation domain TRESU_RS01905 PF03793 PASTA domain TRESU_RS01910 PF10502 Signal peptidase, peptidase S26 TRESU_RS01930 PF12706 Beta-lactamase superfamily domain TRESU_RS01930 PF16123 Hydroxyacylglutathione hydrolase C-terminus TRESU_RS01945 PF10369 Small subunit of acetolactate synthase TRESU_RS01950 PF18152 DAHP synthase ferredoxin-like domain TRESU_RS01950 PF00793 DAHP synthetase I family TRESU_RS01955 PF13840 ACT domain TRESU_RS01955 PF01842 ACT domain TRESU_RS01955 PF00742 Homoserine dehydrogenase TRESU_RS01955 PF00696 Amino acid kinase family TRESU_RS01955 PF03447 Homoserine dehydrogenase, NAD binding domain TRESU_RS01975 PF00472 RF-1 domain TRESU_RS01975 PF03462 PCRF domain TRESU_RS01980 PF01118 Semialdehyde dehydrogenase, NAD binding domain TRESU_RS01980 PF02774 Semialdehyde dehydrogenase, dimerisation domain TRESU_RS01985 PF00701 Dihydrodipicolinate synthetase family TRESU_RS01990 PF00072 Response regulator receiver domain TRESU_RS01990 PF00196 Bacterial regulatory proteins, luxR family TRESU_RS01995 PF01264 Chorismate synthase TRESU_RS02005 PF01177 Asp/Glu/Hydantoin racemase TRESU_RS02010 PF00180 Isocitrate/isopropylmalate dehydrogenase TRESU_RS02015 PF00557 Metallopeptidase family M24 TRESU_RS02020 PF00226 DnaJ domain TRESU_RS02020 PF01556 DnaJ C terminal domain TRESU_RS02020 PF00684 DnaJ central domain TRESU_RS02030 PF01425 Amidase TRESU_RS02035 PF02934 GatB/GatE catalytic domain TRESU_RS02035 PF02637 GatB domain TRESU_RS02045 PF00258 Flavodoxin TRESU_RS02055 PF14310 Fibronectin type III-like domain TRESU_RS02055 PF00933 Glycosyl hydrolase family 3 N terminal domain TRESU_RS02055 PF01915 Glycosyl hydrolase family 3 C-terminal domain TRESU_RS02060 PF02311 AraC-like ligand binding domain TRESU_RS02060 PF12833 Helix-turn-helix domain TRESU_RS02065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TRESU_RS02065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TRESU_RS02070 PF00698 Acyl transferase domain TRESU_RS02080 PF02801 Beta-ketoacyl synthase, C-terminal domain TRESU_RS02080 PF00109 Beta-ketoacyl synthase, N-terminal domain TRESU_RS02085 PF07977 FabA-like domain TRESU_RS02095 PF00334 Nucleoside diphosphate kinase TRESU_RS02100 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TRESU_RS02100 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TRESU_RS02105 PF00448 SRP54-type protein, GTPase domain TRESU_RS02105 PF02881 SRP54-type protein, helical bundle domain TRESU_RS02105 PF02978 Signal peptide binding domain TRESU_RS02135 PF00155 Aminotransferase class I and II TRESU_RS02140 PF00155 Aminotransferase class I and II TRESU_RS02150 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TRESU_RS02150 PF03714 Bacterial pullanase-associated domain TRESU_RS02150 PF00128 Alpha amylase, catalytic domain TRESU_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS02160 PF07730 Histidine kinase TRESU_RS02205 PF13808 DDE_Tnp_1-associated TRESU_RS02205 PF01609 Transposase DDE domain TRESU_RS02235 PF00183 Hsp90 protein TRESU_RS02240 PF04607 Region found in RelA / SpoT proteins TRESU_RS02250 PF00206 Lyase TRESU_RS02250 PF14698 Argininosuccinate lyase C-terminal TRESU_RS02255 PF00497 Bacterial extracellular solute-binding proteins, family 3 TRESU_RS02260 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS02265 PF00005 ABC transporter TRESU_RS02275 PF07085 DRTGG domain TRESU_RS02275 PF02833 DHHA2 domain TRESU_RS02275 PF01368 DHH family TRESU_RS02275 PF00571 CBS domain TRESU_RS02285 PF00005 ABC transporter TRESU_RS02305 PF00849 RNA pseudouridylate synthase TRESU_RS02305 PF01479 S4 domain TRESU_RS02315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TRESU_RS02315 PF01367 5'-3' exonuclease, C-terminal SAM fold TRESU_RS02315 PF00476 DNA polymerase family A TRESU_RS02315 PF01612 3'-5' exonuclease TRESU_RS02320 PF01121 Dephospho-CoA kinase TRESU_RS02330 PF04073 Aminoacyl-tRNA editing domain TRESU_RS02335 PF10531 SLBB domain TRESU_RS02335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRESU_RS02335 PF13237 4Fe-4S dicluster domain TRESU_RS02335 PF13375 RnfC Barrel sandwich hybrid domain TRESU_RS02340 PF03116 NQR2, RnfD, RnfE family TRESU_RS02350 PF02508 Rnf-Nqr subunit, membrane protein TRESU_RS02355 PF02508 Rnf-Nqr subunit, membrane protein TRESU_RS02365 PF03553 Na+/H+ antiporter family TRESU_RS02370 PF00860 Permease family TRESU_RS02380 PF01411 tRNA synthetases class II (A) TRESU_RS02380 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRESU_RS02385 PF13145 PPIC-type PPIASE domain TRESU_RS02390 PF01029 NusB family TRESU_RS02400 PF00166 Chaperonin 10 Kd subunit TRESU_RS02405 PF00140 Sigma-70 factor, region 1.2 TRESU_RS02405 PF04539 Sigma-70 region 3 TRESU_RS02405 PF03979 Sigma-70 factor, region 1.1 TRESU_RS02405 PF04545 Sigma-70, region 4 TRESU_RS02405 PF04542 Sigma-70 region 2 TRESU_RS02410 PF17191 RecG wedge domain TRESU_RS02410 PF00271 Helicase conserved C-terminal domain TRESU_RS02410 PF00270 DEAD/DEAH box helicase TRESU_RS02420 PF14579 Helix-hairpin-helix motif TRESU_RS02420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TRESU_RS02420 PF02811 PHP domain TRESU_RS02420 PF07733 Bacterial DNA polymerase III alpha NTPase domain TRESU_RS02425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS02425 PF00672 HAMP domain TRESU_RS02425 PF02743 Cache domain TRESU_RS02430 PF00665 Integrase core domain TRESU_RS02450 PF01225 Mur ligase family, catalytic domain TRESU_RS02450 PF08245 Mur ligase middle domain TRESU_RS02450 PF02875 Mur ligase family, glutamate ligase domain TRESU_RS02455 PF07478 D-ala D-ala ligase C-terminus TRESU_RS02455 PF01820 D-ala D-ala ligase N-terminus TRESU_RS02460 PF08245 Mur ligase middle domain TRESU_RS02460 PF02875 Mur ligase family, glutamate ligase domain TRESU_RS02475 PF01259 SAICAR synthetase TRESU_RS02480 PF01226 Formate/nitrite transporter TRESU_RS02485 PF02446 4-alpha-glucanotransferase TRESU_RS02495 PF00291 Pyridoxal-phosphate dependent enzyme TRESU_RS02495 PF14821 Threonine synthase N terminus TRESU_RS02505 PF00117 Glutamine amidotransferase class-I TRESU_RS02510 PF00977 Histidine biosynthesis protein TRESU_RS02515 PF00391 PEP-utilising enzyme, mobile domain TRESU_RS02515 PF02887 Pyruvate kinase, alpha/beta domain TRESU_RS02515 PF00224 Pyruvate kinase, barrel domain TRESU_RS02520 PF01242 6-pyruvoyl tetrahydropterin synthase TRESU_RS02535 PF01118 Semialdehyde dehydrogenase, NAD binding domain TRESU_RS02555 PF01381 Helix-turn-helix TRESU_RS02560 PF01869 BadF/BadG/BcrA/BcrD ATPase family TRESU_RS02580 PF01618 MotA/TolQ/ExbB proton channel family TRESU_RS02585 PF02472 Biopolymer transport protein ExbD/TolR TRESU_RS02630 PF12161 HsdM N-terminal domain TRESU_RS02630 PF02384 N-6 DNA Methylase TRESU_RS02645 PF01420 Type I restriction modification DNA specificity domain TRESU_RS02650 PF01420 Type I restriction modification DNA specificity domain TRESU_RS02660 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS02660 PF12008 Type I restriction and modification enzyme - subunit R C terminal TRESU_RS02660 PF18766 SWI2/SNF2 ATPase TRESU_RS02680 PF01202 Shikimate kinase TRESU_RS02685 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TRESU_RS02710 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS02735 PF00330 Aconitase family (aconitate hydratase) TRESU_RS02735 PF00694 Aconitase C-terminal domain TRESU_RS02755 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS02765 PF01381 Helix-turn-helix TRESU_RS02770 PF07730 Histidine kinase TRESU_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS02780 PF13173 AAA domain TRESU_RS02780 PF13635 Domain of unknown function (DUF4143) TRESU_RS02795 PF01467 Cytidylyltransferase-like TRESU_RS02810 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TRESU_RS02815 PF13635 Domain of unknown function (DUF4143) TRESU_RS02815 PF13173 AAA domain TRESU_RS02835 PF01501 Glycosyl transferase family 8 TRESU_RS02835 PF00535 Glycosyl transferase family 2 TRESU_RS02840 PF00534 Glycosyl transferases group 1 TRESU_RS02840 PF13439 Glycosyltransferase Family 4 TRESU_RS02845 PF00534 Glycosyl transferases group 1 TRESU_RS02845 PF13477 Glycosyl transferase 4-like TRESU_RS02850 PF00534 Glycosyl transferases group 1 TRESU_RS02930 PF13173 AAA domain TRESU_RS02930 PF13635 Domain of unknown function (DUF4143) TRESU_RS02945 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TRESU_RS02950 PF00571 CBS domain TRESU_RS02950 PF03448 MgtE intracellular N domain TRESU_RS02950 PF01769 Divalent cation transporter TRESU_RS02970 PF04851 Type III restriction enzyme, res subunit TRESU_RS02970 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS02970 PF08463 EcoEI R protein C-terminal TRESU_RS02970 PF00271 Helicase conserved C-terminal domain TRESU_RS02980 PF12161 HsdM N-terminal domain TRESU_RS02980 PF02384 N-6 DNA Methylase TRESU_RS03000 PF01420 Type I restriction modification DNA specificity domain TRESU_RS03025 PF01554 MatE TRESU_RS03030 PF00291 Pyridoxal-phosphate dependent enzyme TRESU_RS03045 PF00440 Bacterial regulatory proteins, tetR family TRESU_RS03060 PF13603 Leucyl-tRNA synthetase, Domain 2 TRESU_RS03060 PF00133 tRNA synthetases class I (I, L, M and V) TRESU_RS03060 PF09334 tRNA synthetases class I (M) TRESU_RS03060 PF08264 Anticodon-binding domain of tRNA TRESU_RS03065 PF16916 Dimerisation domain of Zinc Transporter TRESU_RS03065 PF01545 Cation efflux family TRESU_RS03080 PF10609 NUBPL iron-transfer P-loop NTPase TRESU_RS03085 PF00953 Glycosyl transferase family 4 TRESU_RS03095 PF00750 tRNA synthetases class I (R) TRESU_RS03095 PF05746 DALR anticodon binding domain TRESU_RS03095 PF03485 Arginyl tRNA synthetase N terminal domain TRESU_RS03100 PF00285 Citrate synthase, C-terminal domain TRESU_RS03105 PF01025 GrpE TRESU_RS03110 PF00012 Hsp70 protein TRESU_RS03115 PF00226 DnaJ domain TRESU_RS03115 PF01556 DnaJ C terminal domain TRESU_RS03115 PF00684 DnaJ central domain TRESU_RS03135 PF02557 D-alanyl-D-alanine carboxypeptidase TRESU_RS03155 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS03165 PF01434 Peptidase family M41 TRESU_RS03165 PF17862 AAA+ lid domain TRESU_RS03165 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS03170 PF00753 Metallo-beta-lactamase superfamily TRESU_RS03175 PF03880 DbpA RNA binding domain TRESU_RS03185 PF00574 Clp protease TRESU_RS03190 PF03819 MazG nucleotide pyrophosphohydrolase domain TRESU_RS03195 PF01195 Peptidyl-tRNA hydrolase TRESU_RS03200 PF12833 Helix-turn-helix domain TRESU_RS03200 PF17853 GGDEF-like domain TRESU_RS03210 PF07683 Cobalamin synthesis protein cobW C-terminal domain TRESU_RS03210 PF02492 CobW/HypB/UreG, nucleotide-binding domain TRESU_RS03225 PF12705 PD-(D/E)XK nuclease superfamily TRESU_RS03225 PF00580 UvrD/REP helicase N-terminal domain TRESU_RS03225 PF13361 UvrD-like helicase C-terminal domain TRESU_RS03245 PF01165 Ribosomal protein S21 TRESU_RS03250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TRESU_RS03250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TRESU_RS03250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TRESU_RS03250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TRESU_RS03255 PF00293 NUDIX domain TRESU_RS03255 PF09297 NADH pyrophosphatase zinc ribbon domain TRESU_RS03270 PF01381 Helix-turn-helix TRESU_RS03280 PF01555 DNA methylase TRESU_RS03280 PF18273 Type III R-M EcoP15I C-terminal domain TRESU_RS03290 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03290 PF01548 Transposase TRESU_RS03300 PF13495 Phage integrase, N-terminal SAM-like domain TRESU_RS03300 PF00589 Phage integrase family TRESU_RS03390 PF02086 D12 class N6 adenine-specific DNA methyltransferase TRESU_RS03395 PF02086 D12 class N6 adenine-specific DNA methyltransferase TRESU_RS03405 PF01555 DNA methylase TRESU_RS03405 PF18755 Restriction Enzyme Adenine Methylase Associated TRESU_RS03415 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03415 PF01548 Transposase TRESU_RS03470 PF08378 Nuclease-related domain TRESU_RS03490 PF01757 Acyltransferase family TRESU_RS03515 PF01548 Transposase TRESU_RS03515 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03520 PF09570 SinI restriction endonuclease TRESU_RS03525 PF12728 Helix-turn-helix domain TRESU_RS03525 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS03560 PF18284 DNA methylase N-terminal domain TRESU_RS03560 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS03565 PF09019 EcoRII C terminal TRESU_RS03565 PF09217 Restriction endonuclease EcoRII, N-terminal TRESU_RS03570 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03570 PF01548 Transposase TRESU_RS03585 PF01381 Helix-turn-helix TRESU_RS03610 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS03620 PF01548 Transposase TRESU_RS03620 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03745 PF01548 Transposase TRESU_RS03745 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03780 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system TRESU_RS03785 PF01548 Transposase TRESU_RS03785 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03805 PF14449 Pre-toxin TG TRESU_RS03915 PF00005 ABC transporter TRESU_RS03915 PF17760 UvrA interaction domain TRESU_RS03915 PF17755 UvrA DNA-binding domain TRESU_RS03925 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS03925 PF01548 Transposase TRESU_RS03960 PF05973 Phage derived protein Gp49-like (DUF891) TRESU_RS03980 PF01548 Transposase TRESU_RS03980 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS04035 PF01548 Transposase TRESU_RS04035 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS04055 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TRESU_RS04055 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TRESU_RS04065 PF08543 Phosphomethylpyrimidine kinase TRESU_RS04065 PF02581 Thiamine monophosphate synthase TRESU_RS04070 PF02581 Thiamine monophosphate synthase TRESU_RS04075 PF02110 Hydroxyethylthiazole kinase family TRESU_RS04130 PF01915 Glycosyl hydrolase family 3 C-terminal domain TRESU_RS04130 PF00933 Glycosyl hydrolase family 3 N terminal domain TRESU_RS04135 PF00085 Thioredoxin TRESU_RS04145 PF13932 GidA associated domain TRESU_RS04145 PF01134 Glucose inhibited division protein A TRESU_RS04155 PF00557 Metallopeptidase family M24 TRESU_RS04155 PF01321 Creatinase/Prolidase N-terminal domain TRESU_RS04160 PF03023 Lipid II flippase MurJ TRESU_RS04165 PF00672 HAMP domain TRESU_RS04165 PF00211 Adenylate and Guanylate cyclase catalytic domain TRESU_RS04175 PF00849 RNA pseudouridylate synthase TRESU_RS04175 PF01479 S4 domain TRESU_RS04180 PF01268 Formate--tetrahydrofolate ligase TRESU_RS04190 PF00682 HMGL-like TRESU_RS04190 PF08502 LeuA allosteric (dimerisation) domain TRESU_RS04195 PF00180 Isocitrate/isopropylmalate dehydrogenase TRESU_RS04200 PF01627 Hpt domain TRESU_RS04200 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS04200 PF00072 Response regulator receiver domain TRESU_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS04205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TRESU_RS04205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TRESU_RS04210 PF01814 Hemerythrin HHE cation binding domain TRESU_RS04225 PF07664 Ferrous iron transport protein B C terminus TRESU_RS04225 PF17910 FeoB cytosolic helical domain TRESU_RS04225 PF02421 Ferrous iron transport protein B TRESU_RS04225 PF07670 Nucleoside recognition TRESU_RS04230 PF01235 Sodium:alanine symporter family TRESU_RS04240 PF04542 Sigma-70 region 2 TRESU_RS04240 PF08281 Sigma-70, region 4 TRESU_RS04250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) TRESU_RS04250 PF00128 Alpha amylase, catalytic domain TRESU_RS04255 PF00343 Carbohydrate phosphorylase TRESU_RS04270 PF01541 GIY-YIG catalytic domain TRESU_RS04270 PF02151 UvrB/uvrC motif TRESU_RS04270 PF08459 UvrC Helix-hairpin-helix N-terminal TRESU_RS04285 PF00731 AIR carboxylase TRESU_RS04290 PF00156 Phosphoribosyl transferase domain TRESU_RS04355 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS04360 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS04365 PF00005 ABC transporter TRESU_RS04370 PF02608 ABC transporter substrate-binding protein PnrA-like TRESU_RS04380 PF00665 Integrase core domain TRESU_RS04420 PF06414 Zeta toxin TRESU_RS04430 PF00586 AIR synthase related protein, N-terminal domain TRESU_RS04430 PF02769 AIR synthase related protein, C-terminal domain TRESU_RS04435 PF02911 Formyl transferase, C-terminal domain TRESU_RS04435 PF00551 Formyl transferase TRESU_RS04440 PF00899 ThiF family TRESU_RS04445 PF13677 Membrane MotB of proton-channel complex MotA/MotB TRESU_RS04445 PF00691 OmpA family TRESU_RS04460 PF00682 HMGL-like TRESU_RS04460 PF02436 Conserved carboxylase domain TRESU_RS04465 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit TRESU_RS04480 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS04480 PF01548 Transposase TRESU_RS04490 PF00829 Ribosomal prokaryotic L21 protein TRESU_RS04500 PF01016 Ribosomal L27 protein TRESU_RS04505 PF01926 50S ribosome-binding GTPase TRESU_RS04505 PF01018 GTP1/OBG TRESU_RS04510 PF01467 Cytidylyltransferase-like TRESU_RS04530 PF01476 LysM domain TRESU_RS04530 PF01464 Transglycosylase SLT domain TRESU_RS04550 PF02699 Preprotein translocase subunit TRESU_RS04555 PF02355 Protein export membrane protein TRESU_RS04560 PF02355 Protein export membrane protein TRESU_RS04565 PF02401 LytB protein TRESU_RS04580 PF01432 Peptidase family M3 TRESU_RS04580 PF08439 Oligopeptidase F TRESU_RS04585 PF08239 Bacterial SH3 domain TRESU_RS04590 PF16326 ABC transporter C-terminal domain TRESU_RS04590 PF00005 ABC transporter TRESU_RS04590 PF12848 ABC transporter TRESU_RS04595 PF16363 GDP-mannose 4,6 dehydratase TRESU_RS04600 PF01546 Peptidase family M20/M25/M40 TRESU_RS04600 PF07687 Peptidase dimerisation domain TRESU_RS04655 PF01609 Transposase DDE domain TRESU_RS04655 PF13808 DDE_Tnp_1-associated TRESU_RS04660 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS04660 PF17758 Proteasomal ATPase OB N-terminal domain TRESU_RS04660 PF16450 Proteasomal ATPase OB C-terminal domain TRESU_RS04685 PF18766 SWI2/SNF2 ATPase TRESU_RS04685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS04685 PF11867 Domain of unknown function (DUF3387) TRESU_RS04695 PF01548 Transposase TRESU_RS04695 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS04725 PF08244 Glycosyl hydrolases family 32 C terminal TRESU_RS04725 PF00251 Glycosyl hydrolases family 32 N-terminal domain TRESU_RS04730 PF00294 pfkB family carbohydrate kinase TRESU_RS04740 PF00210 Ferritin-like domain TRESU_RS04770 PF13808 DDE_Tnp_1-associated TRESU_RS04770 PF01609 Transposase DDE domain TRESU_RS04825 PF00862 Sucrose synthase TRESU_RS04825 PF00534 Glycosyl transferases group 1 TRESU_RS04880 PF02743 Cache domain TRESU_RS04880 PF00672 HAMP domain TRESU_RS04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS04885 PF01960 ArgJ family TRESU_RS04890 PF00696 Amino acid kinase family TRESU_RS04895 PF00202 Aminotransferase class-III TRESU_RS04900 PF17239 Family of unknown function (DUF5312) TRESU_RS04910 PF00764 Arginosuccinate synthase TRESU_RS04915 PF00121 Triosephosphate isomerase TRESU_RS04920 PF02417 Chromate transporter TRESU_RS04935 PF00472 RF-1 domain TRESU_RS04935 PF03462 PCRF domain TRESU_RS04940 PF17827 PrmC N-terminal domain TRESU_RS04940 PF05175 Methyltransferase small domain TRESU_RS04950 PF00465 Iron-containing alcohol dehydrogenase TRESU_RS04960 PF00005 ABC transporter TRESU_RS04965 PF00950 ABC 3 transport family TRESU_RS04970 PF13419 Haloacid dehalogenase-like hydrolase TRESU_RS04975 PF01713 Smr domain TRESU_RS04975 PF00488 MutS domain V TRESU_RS04980 PF01316 Arginine repressor, DNA binding domain TRESU_RS04980 PF02863 Arginine repressor, C-terminal domain TRESU_RS04990 PF00342 Phosphoglucose isomerase TRESU_RS04995 PF01026 TatD related DNase TRESU_RS05010 PF02021 Uncharacterised protein family UPF0102 TRESU_RS05015 PF01312 FlhB HrpN YscU SpaS Family TRESU_RS05025 PF01245 Ribosomal protein L19 TRESU_RS05030 PF01746 tRNA (Guanine-1)-methyltransferase TRESU_RS05035 PF01782 RimM N-terminal domain TRESU_RS05045 PF00886 Ribosomal protein S16 TRESU_RS05050 PF10509 Galactokinase galactose-binding signature TRESU_RS05050 PF00288 GHMP kinases N terminal domain TRESU_RS05050 PF08544 GHMP kinases C terminal TRESU_RS05055 PF12072 Domain of unknown function (DUF3552) TRESU_RS05055 PF00013 KH domain TRESU_RS05055 PF01966 HD domain TRESU_RS05070 PF03062 MBOAT, membrane-bound O-acyltransferase family TRESU_RS05075 PF00550 Phosphopantetheine attachment site TRESU_RS05075 PF00501 AMP-binding enzyme TRESU_RS05075 PF00668 Condensation domain TRESU_RS05075 PF13193 AMP-binding enzyme C-terminal domain TRESU_RS05080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TRESU_RS05080 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TRESU_RS05090 PF00535 Glycosyl transferase family 2 TRESU_RS05110 PF05523 WxcM-like, C-terminal TRESU_RS05115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TRESU_RS05120 PF00535 Glycosyl transferase family 2 TRESU_RS05160 PF16868 NMT1-like family TRESU_RS05215 PF01979 Amidohydrolase family TRESU_RS05215 PF13382 Adenine deaminase C-terminal domain TRESU_RS05220 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS05220 PF05362 Lon protease (S16) C-terminal proteolytic domain TRESU_RS05220 PF02190 ATP-dependent protease La (LON) substrate-binding domain TRESU_RS05270 PF03793 PASTA domain TRESU_RS05270 PF00069 Protein kinase domain TRESU_RS05280 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain TRESU_RS05280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TRESU_RS05280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TRESU_RS05285 PF00106 short chain dehydrogenase TRESU_RS05290 PF00933 Glycosyl hydrolase family 3 N terminal domain TRESU_RS05295 PF01189 16S rRNA methyltransferase RsmB/F TRESU_RS05295 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TRESU_RS05295 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TRESU_RS05300 PF00072 Response regulator receiver domain TRESU_RS05305 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 TRESU_RS05310 PF05164 Cell division protein ZapA TRESU_RS05320 PF00453 Ribosomal protein L20 TRESU_RS05325 PF01632 Ribosomal protein L35 TRESU_RS05330 PF00707 Translation initiation factor IF-3, C-terminal domain TRESU_RS05330 PF05198 Translation initiation factor IF-3, N-terminal domain TRESU_RS05340 PF01116 Fructose-bisphosphate aldolase class-II TRESU_RS05360 PF01330 RuvA N terminal domain TRESU_RS05365 PF05491 RuvB C-terminal winged helix domain TRESU_RS05365 PF17864 RuvB AAA lid domain TRESU_RS05365 PF05496 Holliday junction DNA helicase RuvB P-loop domain TRESU_RS05370 PF02547 Queuosine biosynthesis protein TRESU_RS05390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TRESU_RS05395 PF02719 Polysaccharide biosynthesis protein TRESU_RS05400 PF03477 ATP cone domain TRESU_RS05430 PF00795 Carbon-nitrogen hydrolase TRESU_RS05435 PF08544 GHMP kinases C terminal TRESU_RS05435 PF10509 Galactokinase galactose-binding signature TRESU_RS05440 PF01975 Survival protein SurE TRESU_RS05445 PF13176 Tetratricopeptide repeat TRESU_RS05445 PF13181 Tetratricopeptide repeat TRESU_RS05455 PF11798 IMS family HHH motif TRESU_RS05455 PF11799 impB/mucB/samB family C-terminal domain TRESU_RS05455 PF00817 impB/mucB/samB family TRESU_RS05475 PF02390 Putative methyltransferase TRESU_RS05480 PF00533 BRCA1 C Terminus (BRCT) domain TRESU_RS05480 PF01653 NAD-dependent DNA ligase adenylation domain TRESU_RS05480 PF03120 NAD-dependent DNA ligase OB-fold domain TRESU_RS05485 PF01476 LysM domain TRESU_RS05485 PF08525 Opacity-associated protein A N-terminal motif TRESU_RS05485 PF01551 Peptidase family M23 TRESU_RS05490 PF02272 DHHA1 domain TRESU_RS05490 PF01368 DHH family TRESU_RS05490 PF17768 RecJ OB domain TRESU_RS05490 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TRESU_RS05495 PF02885 Glycosyl transferase family, helical bundle domain TRESU_RS05495 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain TRESU_RS05495 PF00591 Glycosyl transferase family, a/b domain TRESU_RS05520 PF01609 Transposase DDE domain TRESU_RS05520 PF13808 DDE_Tnp_1-associated TRESU_RS05560 PF02899 Phage integrase, N-terminal SAM-like domain TRESU_RS05560 PF00589 Phage integrase family TRESU_RS05570 PF00589 Phage integrase family TRESU_RS05570 PF02899 Phage integrase, N-terminal SAM-like domain TRESU_RS05600 PF02646 RmuC family TRESU_RS05640 PF02899 Phage integrase, N-terminal SAM-like domain TRESU_RS05640 PF00589 Phage integrase family TRESU_RS05655 PF01420 Type I restriction modification DNA specificity domain TRESU_RS05660 PF12161 HsdM N-terminal domain TRESU_RS05660 PF02384 N-6 DNA Methylase TRESU_RS05665 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) TRESU_RS05665 PF04851 Type III restriction enzyme, res subunit TRESU_RS05665 PF00271 Helicase conserved C-terminal domain TRESU_RS05665 PF08463 EcoEI R protein C-terminal TRESU_RS05690 PF08011 PD-(D/E)XK nuclease superfamily TRESU_RS05690 PF09820 Predicted AAA-ATPase TRESU_RS05700 PF00460 Flagella basal body rod protein TRESU_RS05700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRESU_RS05705 PF02049 Flagellar hook-basal body complex protein FliE TRESU_RS05710 PF08345 Flagellar M-ring protein C-terminal TRESU_RS05710 PF01514 Secretory protein of YscJ/FliF family TRESU_RS05715 PF01706 FliG C-terminal domain TRESU_RS05715 PF14841 FliG middle domain TRESU_RS05715 PF14842 FliG N-terminal domain TRESU_RS05720 PF02108 Flagellar assembly protein FliH TRESU_RS05725 PF18269 T3SS EscN ATPase C-terminal domain TRESU_RS05725 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRESU_RS05725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS05735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TRESU_RS05735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRESU_RS05735 PF03129 Anticodon binding domain TRESU_RS05740 PF02195 ParB-like nuclease domain TRESU_RS05740 PF17762 HTH domain found in ParB protein TRESU_RS05745 PF17092 Penicillin-binding protein OB-like domain TRESU_RS05745 PF00912 Transglycosylase TRESU_RS05745 PF00905 Penicillin binding protein transpeptidase domain TRESU_RS05750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TRESU_RS05750 PF01872 RibD C-terminal domain TRESU_RS05755 PF00677 Lumazine binding domain TRESU_RS05760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TRESU_RS05760 PF00925 GTP cyclohydrolase II TRESU_RS05765 PF00885 6,7-dimethyl-8-ribityllumazine synthase TRESU_RS05770 PF13393 Histidyl-tRNA synthetase TRESU_RS05775 PF03309 Type III pantothenate kinase TRESU_RS05780 PF03102 NeuB family TRESU_RS05780 PF08666 SAF domain TRESU_RS05785 PF00133 tRNA synthetases class I (I, L, M and V) TRESU_RS05785 PF08264 Anticodon-binding domain of tRNA TRESU_RS05810 PF01973 Protein of unknown function DUF115 TRESU_RS05835 PF01668 SmpB protein TRESU_RS05845 PF04055 Radical SAM superfamily TRESU_RS05850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TRESU_RS05850 PF02779 Transketolase, pyrimidine binding domain TRESU_RS05850 PF02780 Transketolase, C-terminal domain TRESU_RS05855 PF00809 Pterin binding enzyme TRESU_RS05860 PF02457 DisA bacterial checkpoint controller nucleotide-binding TRESU_RS05870 PF01648 4'-phosphopantetheinyl transferase superfamily TRESU_RS05875 PF09986 Uncharacterized protein conserved in bacteria (DUF2225) TRESU_RS05880 PF01416 tRNA pseudouridine synthase TRESU_RS05900 PF00293 NUDIX domain TRESU_RS05920 PF01740 STAS domain TRESU_RS05955 PF01119 DNA mismatch repair protein, C-terminal domain TRESU_RS05955 PF08676 MutL C terminal dimerisation domain TRESU_RS05960 PF02609 Exonuclease VII small subunit TRESU_RS05965 PF02601 Exonuclease VII, large subunit TRESU_RS05965 PF13742 OB-fold nucleic acid binding domain TRESU_RS05970 PF13186 Iron-sulfur cluster-binding domain TRESU_RS05980 PF02348 Cytidylyltransferase TRESU_RS05985 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TRESU_RS05985 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TRESU_RS05985 PF02142 MGS-like domain TRESU_RS05990 PF01520 N-acetylmuramoyl-L-alanine amidase TRESU_RS06000 PF04620 Flagellar filament outer layer protein Flaa TRESU_RS06015 PF06826 Predicted Permease Membrane Region TRESU_RS06015 PF02080 TrkA-C domain TRESU_RS06020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TRESU_RS06020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TRESU_RS06030 PF00403 Heavy-metal-associated domain TRESU_RS06055 PF01613 Flavin reductase like domain TRESU_RS06055 PF00301 Rubredoxin TRESU_RS06090 PF01555 DNA methylase TRESU_RS06090 PF18273 Type III R-M EcoP15I C-terminal domain TRESU_RS06105 PF00270 DEAD/DEAH box helicase TRESU_RS06105 PF00271 Helicase conserved C-terminal domain TRESU_RS06110 PF12848 ABC transporter TRESU_RS06110 PF00005 ABC transporter TRESU_RS06120 PF17820 PDZ domain TRESU_RS06120 PF02163 Peptidase family M50 TRESU_RS06125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TRESU_RS06125 PF13288 DXP reductoisomerase C-terminal domain TRESU_RS06125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TRESU_RS06135 PF01255 Putative undecaprenyl diphosphate synthase TRESU_RS06140 PF01765 Ribosome recycling factor TRESU_RS06145 PF00889 Elongation factor TS TRESU_RS06150 PF00318 Ribosomal protein S2 TRESU_RS06155 PF02545 Maf-like protein TRESU_RS06175 PF01467 Cytidylyltransferase-like TRESU_RS06180 PF01783 Ribosomal L32p protein family TRESU_RS06185 PF00550 Phosphopantetheine attachment site TRESU_RS06190 PF14622 Ribonuclease-III-like TRESU_RS06190 PF00035 Double-stranded RNA binding motif TRESU_RS06195 PF12627 Probable RNA and SrmB- binding site of polymerase A TRESU_RS06195 PF01743 Poly A polymerase head domain TRESU_RS06195 PF13735 tRNA nucleotidyltransferase domain 2 putative TRESU_RS06220 PF08323 Starch synthase catalytic domain TRESU_RS06220 PF00534 Glycosyl transferases group 1 TRESU_RS06235 PF05958 tRNA (Uracil-5-)-methyltransferase TRESU_RS06240 PF13419 Haloacid dehalogenase-like hydrolase TRESU_RS06245 PF01197 Ribosomal protein L31 TRESU_RS06255 PF10672 S-adenosylmethionine-dependent methyltransferase TRESU_RS06290 PF01381 Helix-turn-helix TRESU_RS06290 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS06295 PF00216 Bacterial DNA-binding protein TRESU_RS06300 PF01250 Ribosomal protein S6 TRESU_RS06305 PF00436 Single-strand binding protein family TRESU_RS06310 PF01084 Ribosomal protein S18 TRESU_RS06315 PF01281 Ribosomal protein L9, N-terminal domain TRESU_RS06315 PF03948 Ribosomal protein L9, C-terminal domain TRESU_RS06320 PF00772 DnaB-like helicase N terminal domain TRESU_RS06320 PF03796 DnaB-like helicase C terminal domain TRESU_RS06335 PF08275 DNA primase catalytic core, N-terminal domain TRESU_RS06335 PF01807 CHC2 zinc finger TRESU_RS06340 PF00140 Sigma-70 factor, region 1.2 TRESU_RS06340 PF03979 Sigma-70 factor, region 1.1 TRESU_RS06340 PF04545 Sigma-70, region 4 TRESU_RS06340 PF04539 Sigma-70 region 3 TRESU_RS06340 PF04542 Sigma-70 region 2 TRESU_RS06370 PF00905 Penicillin binding protein transpeptidase domain TRESU_RS06370 PF03717 Penicillin-binding Protein dimerisation domain TRESU_RS06375 PF01098 Cell cycle protein TRESU_RS06385 PF03461 TRCF domain TRESU_RS06385 PF02559 CarD-like/TRCF domain TRESU_RS06385 PF17757 UvrB interaction domain TRESU_RS06385 PF00270 DEAD/DEAH box helicase TRESU_RS06385 PF00271 Helicase conserved C-terminal domain TRESU_RS06405 PF13419 Haloacid dehalogenase-like hydrolase TRESU_RS06410 PF00842 Alanine racemase, C-terminal domain TRESU_RS06410 PF01168 Alanine racemase, N-terminal domain TRESU_RS06415 PF02875 Mur ligase family, glutamate ligase domain TRESU_RS06415 PF08245 Mur ligase middle domain TRESU_RS06430 PF00005 ABC transporter TRESU_RS06435 PF00753 Metallo-beta-lactamase superfamily TRESU_RS06435 PF12706 Beta-lactamase superfamily domain TRESU_RS06445 PF01050 Mannose-6-phosphate isomerase TRESU_RS06445 PF00483 Nucleotidyl transferase TRESU_RS06450 PF04321 RmlD substrate binding domain TRESU_RS06460 PF00873 AcrB/AcrD/AcrF family TRESU_RS06475 PF00440 Bacterial regulatory proteins, tetR family TRESU_RS06475 PF08361 MAATS-type transcriptional repressor, C-terminal region TRESU_RS06480 PF01479 S4 domain TRESU_RS06480 PF00849 RNA pseudouridylate synthase TRESU_RS06485 PF00849 RNA pseudouridylate synthase TRESU_RS06495 PF01168 Alanine racemase, N-terminal domain TRESU_RS06500 PF00398 Ribosomal RNA adenine dimethylase TRESU_RS06525 PF14821 Threonine synthase N terminus TRESU_RS06525 PF00291 Pyridoxal-phosphate dependent enzyme TRESU_RS06540 PF02875 Mur ligase family, glutamate ligase domain TRESU_RS06540 PF01225 Mur ligase family, catalytic domain TRESU_RS06540 PF08245 Mur ligase middle domain TRESU_RS06545 PF01261 Xylose isomerase-like TIM barrel TRESU_RS06550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRESU_RS06550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRESU_RS06555 PF12833 Helix-turn-helix domain TRESU_RS06555 PF01497 Periplasmic binding protein TRESU_RS06560 PF01556 DnaJ C terminal domain TRESU_RS06560 PF00226 DnaJ domain TRESU_RS06560 PF00684 DnaJ central domain TRESU_RS06565 PF00158 Sigma-54 interaction domain TRESU_RS06565 PF00072 Response regulator receiver domain TRESU_RS06565 PF02954 Bacterial regulatory protein, Fis family TRESU_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS06570 PF13188 PAS domain TRESU_RS06570 PF13426 PAS domain TRESU_RS06570 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS06570 PF00989 PAS fold TRESU_RS06575 PF12169 DNA polymerase III subunits gamma and tau domain III TRESU_RS06585 PF03033 Glycosyltransferase family 28 N-terminal domain TRESU_RS06585 PF04101 Glycosyltransferase family 28 C-terminal domain TRESU_RS06600 PF00005 ABC transporter TRESU_RS06605 PF00005 ABC transporter TRESU_RS06645 PF05697 Bacterial trigger factor protein (TF) TRESU_RS06645 PF05698 Bacterial trigger factor protein (TF) C-terminus TRESU_RS06645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TRESU_RS06650 PF00574 Clp protease TRESU_RS06655 PF10431 C-terminal, D2-small domain, of ClpB protein TRESU_RS06655 PF07724 AAA domain (Cdc48 subfamily) TRESU_RS06655 PF06689 ClpX C4-type zinc finger TRESU_RS06660 PF00534 Glycosyl transferases group 1 TRESU_RS06660 PF13439 Glycosyltransferase Family 4 TRESU_RS06665 PF00271 Helicase conserved C-terminal domain TRESU_RS06665 PF00270 DEAD/DEAH box helicase TRESU_RS06670 PF02463 RecF/RecN/SMC N terminal domain TRESU_RS06670 PF06470 SMC proteins Flexible Hinge Domain TRESU_RS06680 PF13525 Outer membrane lipoprotein TRESU_RS06690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TRESU_RS06690 PF02403 Seryl-tRNA synthetase N-terminal domain TRESU_RS06695 PF01594 AI-2E family transporter TRESU_RS06710 PF01027 Inhibitor of apoptosis-promoting Bax1 TRESU_RS06715 PF06733 DEAD_2 TRESU_RS06715 PF13307 Helicase C-terminal domain TRESU_RS06720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TRESU_RS06720 PF00056 lactate/malate dehydrogenase, NAD binding domain TRESU_RS06725 PF00206 Lyase TRESU_RS06725 PF10415 Fumarase C C-terminus TRESU_RS06760 PF00970 Oxidoreductase FAD-binding domain TRESU_RS06760 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TRESU_RS06770 PF02910 Fumarate reductase flavoprotein C-term TRESU_RS06770 PF00890 FAD binding domain TRESU_RS06780 PF00535 Glycosyl transferase family 2 TRESU_RS06815 PF00535 Glycosyl transferase family 2 TRESU_RS06815 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase TRESU_RS06830 PF01467 Cytidylyltransferase-like TRESU_RS06845 PF01588 Putative tRNA binding domain TRESU_RS06845 PF09334 tRNA synthetases class I (M) TRESU_RS06850 PF02388 FemAB family TRESU_RS06885 PF13375 RnfC Barrel sandwich hybrid domain TRESU_RS06885 PF13237 4Fe-4S dicluster domain TRESU_RS06885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TRESU_RS06885 PF10531 SLBB domain TRESU_RS06900 PF00849 RNA pseudouridylate synthase TRESU_RS06910 PF12627 Probable RNA and SrmB- binding site of polymerase A TRESU_RS06910 PF01743 Poly A polymerase head domain TRESU_RS06910 PF12626 Polymerase A arginine-rich C-terminus TRESU_RS06915 PF12146 Serine aminopeptidase, S33 TRESU_RS06920 PF00579 tRNA synthetases class I (W and Y) TRESU_RS06925 PF08323 Starch synthase catalytic domain TRESU_RS06925 PF00534 Glycosyl transferases group 1 TRESU_RS06930 PF00155 Aminotransferase class I and II TRESU_RS06960 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS06965 PF00005 ABC transporter TRESU_RS06970 PF18610 Periplasmic binding protein domain TRESU_RS06970 PF13407 Periplasmic binding protein domain TRESU_RS06980 PF06165 Glycosyltransferase family 36 TRESU_RS06980 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain TRESU_RS07005 PF04055 Radical SAM superfamily TRESU_RS07015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TRESU_RS07015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TRESU_RS07020 PF00330 Aconitase family (aconitate hydratase) TRESU_RS07025 PF00694 Aconitase C-terminal domain TRESU_RS07040 PF00128 Alpha amylase, catalytic domain TRESU_RS07040 PF16738 Starch-binding module 26 TRESU_RS07045 PF13802 Galactose mutarotase-like TRESU_RS07045 PF17137 Domain of unknown function (DUF5110) TRESU_RS07045 PF16338 Domain of unknown function (DUF4968) TRESU_RS07045 PF01055 Glycosyl hydrolases family 31 TRESU_RS07055 PF00860 Permease family TRESU_RS07065 PF00749 tRNA synthetases class I (E and Q), catalytic domain TRESU_RS07070 PF00005 ABC transporter TRESU_RS07080 PF01381 Helix-turn-helix TRESU_RS07100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TRESU_RS07100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TRESU_RS07100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TRESU_RS07110 PF00700 Bacterial flagellin C-terminal helical region TRESU_RS07110 PF00669 Bacterial flagellin N-terminal helical region TRESU_RS07115 PF00700 Bacterial flagellin C-terminal helical region TRESU_RS07115 PF00669 Bacterial flagellin N-terminal helical region TRESU_RS07125 PF02465 Flagellar hook-associated protein 2 N-terminus TRESU_RS07125 PF07195 Flagellar hook-associated protein 2 C-terminus TRESU_RS07145 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TRESU_RS07150 PF00814 Glycoprotease family TRESU_RS07155 PF02599 Global regulator protein family TRESU_RS07160 PF02623 FliW protein TRESU_RS07165 PF00700 Bacterial flagellin C-terminal helical region TRESU_RS07165 PF00669 Bacterial flagellin N-terminal helical region TRESU_RS07170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRESU_RS07170 PF07196 Flagellin hook IN motif TRESU_RS07185 PF00460 Flagella basal body rod protein TRESU_RS07185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRESU_RS07190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRESU_RS07190 PF00460 Flagella basal body rod protein TRESU_RS07195 PF00563 EAL domain TRESU_RS07195 PF00990 Diguanylate cyclase, GGDEF domain TRESU_RS07195 PF03707 Bacterial signalling protein N terminal repeat TRESU_RS07200 PF00483 Nucleotidyl transferase TRESU_RS07205 PF07497 Rho termination factor, RNA-binding domain TRESU_RS07205 PF07498 Rho termination factor, N-terminal domain TRESU_RS07205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS07215 PF00216 Bacterial DNA-binding protein TRESU_RS07220 PF01649 Ribosomal protein S20 TRESU_RS07230 PF07745 Glycosyl hydrolase family 53 TRESU_RS07280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TRESU_RS07280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TRESU_RS07290 PF02272 DHHA1 domain TRESU_RS07290 PF01368 DHH family TRESU_RS07300 PF13808 DDE_Tnp_1-associated TRESU_RS07300 PF01609 Transposase DDE domain TRESU_RS07305 PF01725 Ham1 family TRESU_RS07310 PF14849 YidC periplasmic domain TRESU_RS07310 PF02096 60Kd inner membrane protein TRESU_RS07315 PF00534 Glycosyl transferases group 1 TRESU_RS07315 PF13439 Glycosyltransferase Family 4 TRESU_RS07320 PF02397 Bacterial sugar transferase TRESU_RS07335 PF04551 GcpE protein TRESU_RS07350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS07350 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRESU_RS07355 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRESU_RS07355 PF16886 ATPsynthase alpha/beta subunit N-term extension TRESU_RS07355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS07365 PF01991 ATP synthase (E/31 kDa) subunit TRESU_RS07370 PF01263 Aldose 1-epimerase TRESU_RS07400 PF02687 FtsX-like permease family TRESU_RS07400 PF12704 MacB-like periplasmic core domain TRESU_RS07405 PF00682 HMGL-like TRESU_RS07405 PF08502 LeuA allosteric (dimerisation) domain TRESU_RS07410 PF16314 Domain of unknown function (DUF4954) TRESU_RS07425 PF13286 Phosphohydrolase-associated domain TRESU_RS07425 PF01966 HD domain TRESU_RS07445 PF07745 Glycosyl hydrolase family 53 TRESU_RS07495 PF00456 Transketolase, thiamine diphosphate binding domain TRESU_RS07495 PF02779 Transketolase, pyrimidine binding domain TRESU_RS07500 PF05524 PEP-utilising enzyme, N-terminal TRESU_RS07500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TRESU_RS07500 PF00391 PEP-utilising enzyme, mobile domain TRESU_RS07500 PF00381 PTS HPr component phosphorylation site TRESU_RS07500 PF02896 PEP-utilising enzyme, TIM barrel domain TRESU_RS07515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TRESU_RS07515 PF00205 Thiamine pyrophosphate enzyme, central domain TRESU_RS07515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRESU_RS07520 PF16258 Domain of unknown function (DUF4912) TRESU_RS07530 PF14849 YidC periplasmic domain TRESU_RS07530 PF02096 60Kd inner membrane protein TRESU_RS07540 PF00155 Aminotransferase class I and II TRESU_RS07580 PF07724 AAA domain (Cdc48 subfamily) TRESU_RS07580 PF10431 C-terminal, D2-small domain, of ClpB protein TRESU_RS07580 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS07580 PF02861 Clp amino terminal domain, pathogenicity island component TRESU_RS07580 PF17871 AAA lid domain TRESU_RS07595 PF08367 Peptidase M16C associated TRESU_RS07595 PF00675 Insulinase (Peptidase family M16) TRESU_RS07595 PF05193 Peptidase M16 inactive domain TRESU_RS07600 PF01706 FliG C-terminal domain TRESU_RS07600 PF14841 FliG middle domain TRESU_RS07600 PF14842 FliG N-terminal domain TRESU_RS07605 PF00595 PDZ domain TRESU_RS07610 PF02659 Putative manganese efflux pump TRESU_RS07620 PF03590 Aspartate-ammonia ligase TRESU_RS07625 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain TRESU_RS07625 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain TRESU_RS07640 PF00271 Helicase conserved C-terminal domain TRESU_RS07640 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold TRESU_RS07640 PF00270 DEAD/DEAH box helicase TRESU_RS07640 PF04408 Helicase associated domain (HA2) TRESU_RS07685 PF05191 Adenylate kinase, active site lid TRESU_RS07690 PF00579 tRNA synthetases class I (W and Y) TRESU_RS07690 PF01479 S4 domain TRESU_RS07715 PF00266 Aminotransferase class-V TRESU_RS07725 PF01458 Uncharacterized protein family (UPF0051) TRESU_RS07730 PF00005 ABC transporter TRESU_RS07765 PF00005 ABC transporter TRESU_RS07770 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS07775 PF00497 Bacterial extracellular solute-binding proteins, family 3 TRESU_RS07780 PF00919 Uncharacterized protein family UPF0004 TRESU_RS07780 PF04055 Radical SAM superfamily TRESU_RS07780 PF01938 TRAM domain TRESU_RS07790 PF02649 Type I GTP cyclohydrolase folE2 TRESU_RS07795 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TRESU_RS07795 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TRESU_RS07810 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS07810 PF12002 MgsA AAA+ ATPase C terminal TRESU_RS07810 PF16193 AAA C-terminal domain TRESU_RS07815 PF05175 Methyltransferase small domain TRESU_RS07820 PF16199 Radical_SAM C-terminal domain TRESU_RS07820 PF04055 Radical SAM superfamily TRESU_RS07825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TRESU_RS07825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TRESU_RS07830 PF01370 NAD dependent epimerase/dehydratase family TRESU_RS07845 PF04539 Sigma-70 region 3 TRESU_RS07845 PF04545 Sigma-70, region 4 TRESU_RS07845 PF04542 Sigma-70 region 2 TRESU_RS07855 PF10609 NUBPL iron-transfer P-loop NTPase TRESU_RS07860 PF00448 SRP54-type protein, GTPase domain TRESU_RS07865 PF00771 FHIPEP family TRESU_RS07870 PF01312 FlhB HrpN YscU SpaS Family TRESU_RS07875 PF01311 Bacterial export proteins, family 1 TRESU_RS07880 PF01313 Bacterial export proteins, family 3 TRESU_RS07885 PF00813 FliP family TRESU_RS07895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TRESU_RS07900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TRESU_RS07900 PF02154 Flagellar motor switch protein FliM TRESU_RS07905 PF03748 Flagellar basal body-associated protein FliL TRESU_RS07910 PF13677 Membrane MotB of proton-channel complex MotA/MotB TRESU_RS07910 PF00691 OmpA family TRESU_RS07915 PF01618 MotA/TolQ/ExbB proton channel family TRESU_RS07920 PF06289 Flagellar and Swarming motility proteins TRESU_RS07925 PF12072 Domain of unknown function (DUF3552) TRESU_RS07925 PF00013 KH domain TRESU_RS07925 PF01966 HD domain TRESU_RS07930 PF00486 Transcriptional regulatory protein, C terminal TRESU_RS07930 PF00072 Response regulator receiver domain TRESU_RS07935 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS07935 PF00989 PAS fold TRESU_RS07935 PF00672 HAMP domain TRESU_RS07935 PF18698 Histidine kinase sensor domain TRESU_RS07950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TRESU_RS07950 PF07559 Flagellar basal body protein FlaE TRESU_RS07950 PF00460 Flagella basal body rod protein TRESU_RS07955 PF03963 Flagellar hook capping protein - N-terminal region TRESU_RS07980 PF13361 UvrD-like helicase C-terminal domain TRESU_RS07980 PF00580 UvrD/REP helicase N-terminal domain TRESU_RS07990 PF16363 GDP-mannose 4,6 dehydratase TRESU_RS07995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TRESU_RS08000 PF00483 Nucleotidyl transferase TRESU_RS08010 PF10502 Signal peptidase, peptidase S26 TRESU_RS08020 PF04453 LPS transport system D TRESU_RS08020 PF03968 OstA-like protein TRESU_RS08025 PF17755 UvrA DNA-binding domain TRESU_RS08025 PF00005 ABC transporter TRESU_RS08025 PF17760 UvrA interaction domain TRESU_RS08030 PF01554 MatE TRESU_RS08035 PF00291 Pyridoxal-phosphate dependent enzyme TRESU_RS08040 PF02082 Transcriptional regulator TRESU_RS08060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS08060 PF00672 HAMP domain TRESU_RS08070 PF02926 THUMP domain TRESU_RS08070 PF02568 Thiamine biosynthesis protein (ThiI) TRESU_RS08085 PF00534 Glycosyl transferases group 1 TRESU_RS08085 PF13439 Glycosyltransferase Family 4 TRESU_RS08090 PF03167 Uracil DNA glycosylase superfamily TRESU_RS08095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TRESU_RS08095 PF18074 Primosomal protein N C-terminal domain TRESU_RS08095 PF00270 DEAD/DEAH box helicase TRESU_RS08095 PF00271 Helicase conserved C-terminal domain TRESU_RS08095 PF17764 3′ DNA-binding domain (3′BD) TRESU_RS08100 PF00501 AMP-binding enzyme TRESU_RS08100 PF13193 AMP-binding enzyme C-terminal domain TRESU_RS08105 PF02810 SEC-C motif TRESU_RS08105 PF07517 SecA DEAD-like domain TRESU_RS08105 PF01043 SecA preprotein cross-linking domain TRESU_RS08105 PF07516 SecA Wing and Scaffold domain TRESU_RS08110 PF07724 AAA domain (Cdc48 subfamily) TRESU_RS08110 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS08115 PF00227 Proteasome subunit TRESU_RS08120 PF00589 Phage integrase family TRESU_RS08120 PF02899 Phage integrase, N-terminal SAM-like domain TRESU_RS08125 PF01396 Topoisomerase DNA binding C4 zinc finger TRESU_RS08125 PF01751 Toprim domain TRESU_RS08125 PF01131 DNA topoisomerase TRESU_RS08130 PF17782 DprA winged helix domain TRESU_RS08130 PF02481 DNA recombination-mediator protein A TRESU_RS08140 PF00589 Phage integrase family TRESU_RS08140 PF02899 Phage integrase, N-terminal SAM-like domain TRESU_RS08145 PF00091 Tubulin/FtsZ family, GTPase domain TRESU_RS08145 PF12327 FtsZ family, C-terminal domain TRESU_RS08150 PF02491 SHS2 domain inserted in FTSA TRESU_RS08160 PF01098 Cell cycle protein TRESU_RS08165 PF02875 Mur ligase family, glutamate ligase domain TRESU_RS08165 PF01225 Mur ligase family, catalytic domain TRESU_RS08165 PF08245 Mur ligase middle domain TRESU_RS08175 PF01795 MraW methylase family TRESU_RS08180 PF02381 MraZ protein, putative antitoxin-like TRESU_RS08190 PF02075 Crossover junction endodeoxyribonuclease RuvC TRESU_RS08195 PF01709 Transcriptional regulator TRESU_RS08205 PF01548 Transposase TRESU_RS08205 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS08210 PF01479 S4 domain TRESU_RS08210 PF00849 RNA pseudouridylate synthase TRESU_RS08220 PF00391 PEP-utilising enzyme, mobile domain TRESU_RS08220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TRESU_RS08220 PF00381 PTS HPr component phosphorylation site TRESU_RS08220 PF02896 PEP-utilising enzyme, TIM barrel domain TRESU_RS08220 PF05524 PEP-utilising enzyme, N-terminal TRESU_RS08240 PF00072 Response regulator receiver domain TRESU_RS08250 PF01584 CheW-like domain TRESU_RS08255 PF02895 Signal transducing histidine kinase, homodimeric domain TRESU_RS08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS08255 PF01584 CheW-like domain TRESU_RS08255 PF01627 Hpt domain TRESU_RS08255 PF07194 P2 response regulator binding domain TRESU_RS08265 PF00072 Response regulator receiver domain TRESU_RS08265 PF00486 Transcriptional regulatory protein, C terminal TRESU_RS08275 PF01813 ATP synthase subunit D TRESU_RS08280 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRESU_RS08280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS08285 PF16886 ATPsynthase alpha/beta subunit N-term extension TRESU_RS08285 PF02874 ATP synthase alpha/beta family, beta-barrel domain TRESU_RS08285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TRESU_RS08305 PF01496 V-type ATPase 116kDa subunit family TRESU_RS08320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TRESU_RS08325 PF03840 Preprotein translocase SecG subunit TRESU_RS08365 PF04539 Sigma-70 region 3 TRESU_RS08365 PF03979 Sigma-70 factor, region 1.1 TRESU_RS08365 PF00140 Sigma-70 factor, region 1.2 TRESU_RS08365 PF04542 Sigma-70 region 2 TRESU_RS08365 PF04545 Sigma-70, region 4 TRESU_RS08420 PF09313 Domain of unknown function (DUF1971) TRESU_RS08420 PF03848 Tellurite resistance protein TehB TRESU_RS08425 PF03352 Methyladenine glycosylase TRESU_RS08460 PF01026 TatD related DNase TRESU_RS08475 PF10672 S-adenosylmethionine-dependent methyltransferase TRESU_RS08475 PF17785 PUA-like domain TRESU_RS08480 PF00162 Phosphoglycerate kinase TRESU_RS08490 PF00571 CBS domain TRESU_RS08490 PF03471 Transporter associated domain TRESU_RS08495 PF02130 Uncharacterized protein family UPF0054 TRESU_RS08500 PF01966 HD domain TRESU_RS08500 PF07697 7TM-HD extracellular TRESU_RS08500 PF07698 7TM receptor with intracellular HD hydrolase TRESU_RS08505 PF02562 PhoH-like protein TRESU_RS08515 PF08264 Anticodon-binding domain of tRNA TRESU_RS08515 PF00133 tRNA synthetases class I (I, L, M and V) TRESU_RS08515 PF10458 Valyl tRNA synthetase tRNA binding arm TRESU_RS08530 PF00293 NUDIX domain TRESU_RS08545 PF13173 AAA domain TRESU_RS08545 PF13635 Domain of unknown function (DUF4143) TRESU_RS08550 PF04260 Protein of unknown function (DUF436) TRESU_RS08555 PF00571 CBS domain TRESU_RS08555 PF01595 Cyclin M transmembrane N-terminal domain TRESU_RS08555 PF03471 Transporter associated domain TRESU_RS08580 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS08590 PF01209 ubiE/COQ5 methyltransferase family TRESU_RS08600 PF01555 DNA methylase TRESU_RS08605 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS08605 PF00672 HAMP domain TRESU_RS08610 PF00486 Transcriptional regulatory protein, C terminal TRESU_RS08610 PF00072 Response regulator receiver domain TRESU_RS08620 PF01555 DNA methylase TRESU_RS08635 PF04556 DpnII restriction endonuclease TRESU_RS08645 PF02086 D12 class N6 adenine-specific DNA methyltransferase TRESU_RS08670 PF01969 Protein of unknown function DUF111 TRESU_RS08675 PF00731 AIR carboxylase TRESU_RS08680 PF02540 NAD synthase TRESU_RS08695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS08695 PF17200 Single Cache domain 2 TRESU_RS08695 PF00672 HAMP domain TRESU_RS08700 PF13808 DDE_Tnp_1-associated TRESU_RS08700 PF01609 Transposase DDE domain TRESU_RS08720 PF13614 AAA domain TRESU_RS08785 PF00436 Single-strand binding protein family TRESU_RS08835 PF00271 Helicase conserved C-terminal domain TRESU_RS08835 PF04434 SWIM zinc finger TRESU_RS08835 PF00176 SNF2 family N-terminal domain TRESU_RS08895 PF03135 CagE, TrbE, VirB family, component of type IV transporter system TRESU_RS08910 PF00437 Type II/IV secretion system protein TRESU_RS08925 PF02534 Type IV secretory system Conjugative DNA transfer TRESU_RS09020 PF01751 Toprim domain TRESU_RS09020 PF01131 DNA topoisomerase TRESU_RS09025 PF13936 Helix-turn-helix domain TRESU_RS09030 PF00464 Serine hydroxymethyltransferase TRESU_RS09115 PF02837 Glycosyl hydrolases family 2, sugar binding domain TRESU_RS09115 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TRESU_RS09115 PF16355 Domain of unknown function (DUF4982) TRESU_RS09115 PF00703 Glycosyl hydrolases family 2 TRESU_RS09115 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 TRESU_RS09120 PF00962 Adenosine/AMP deaminase TRESU_RS09130 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TRESU_RS09145 PF00849 RNA pseudouridylate synthase TRESU_RS09145 PF01479 S4 domain TRESU_RS09150 PF03193 RsgA GTPase TRESU_RS09160 PF00679 Elongation factor G C-terminus TRESU_RS09160 PF03144 Elongation factor Tu domain 2 TRESU_RS09160 PF14492 Elongation Factor G, domain II TRESU_RS09160 PF03764 Elongation factor G, domain IV TRESU_RS09160 PF00009 Elongation factor Tu GTP binding domain TRESU_RS09165 PF00072 Response regulator receiver domain TRESU_RS09170 PF00795 Carbon-nitrogen hydrolase TRESU_RS09170 PF02540 NAD synthase TRESU_RS09175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ TRESU_RS09190 PF02954 Bacterial regulatory protein, Fis family TRESU_RS09190 PF00158 Sigma-54 interaction domain TRESU_RS09190 PF00072 Response regulator receiver domain TRESU_RS09195 PF00575 S1 RNA binding domain TRESU_RS09200 PF00849 RNA pseudouridylate synthase TRESU_RS09200 PF01479 S4 domain TRESU_RS09205 PF04079 Segregation and condensation complex subunit ScpB TRESU_RS09210 PF02616 Segregation and condensation protein ScpA TRESU_RS09215 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) TRESU_RS09220 PF00154 recA bacterial DNA recombination protein TRESU_RS09225 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS09230 PF13187 4Fe-4S dicluster domain TRESU_RS09235 PF01551 Peptidase family M23 TRESU_RS09235 PF04225 Opacity-associated protein A LysM-like domain TRESU_RS09265 PF06421 GTP-binding protein LepA C-terminus TRESU_RS09265 PF03144 Elongation factor Tu domain 2 TRESU_RS09265 PF00009 Elongation factor Tu GTP binding domain TRESU_RS09265 PF14492 Elongation Factor G, domain II TRESU_RS09265 PF00679 Elongation factor G C-terminus TRESU_RS09270 PF17820 PDZ domain TRESU_RS09270 PF13180 PDZ domain TRESU_RS09285 PF01386 Ribosomal L25p family TRESU_RS09285 PF14693 Ribosomal protein TL5, C-terminal domain TRESU_RS09295 PF04026 SpoVG TRESU_RS09300 PF08544 GHMP kinases C terminal TRESU_RS09300 PF00288 GHMP kinases N terminal domain TRESU_RS09325 PF02463 RecF/RecN/SMC N terminal domain TRESU_RS09330 PF01513 ATP-NAD kinase TRESU_RS09335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TRESU_RS09340 PF01584 CheW-like domain TRESU_RS09345 PF00156 Phosphoribosyl transferase domain TRESU_RS09350 PF05188 MutS domain II TRESU_RS09350 PF00488 MutS domain V TRESU_RS09350 PF01624 MutS domain I TRESU_RS09350 PF05192 MutS domain III TRESU_RS09350 PF05190 MutS family domain IV TRESU_RS09360 PF01103 Surface antigen TRESU_RS09360 PF07244 Surface antigen variable number repeat TRESU_RS09370 PF02223 Thymidylate kinase TRESU_RS09385 PF02219 Methylenetetrahydrofolate reductase TRESU_RS09390 PF02607 B12 binding domain TRESU_RS09390 PF02965 Vitamin B12 dependent methionine synthase, activation domain TRESU_RS09390 PF02574 Homocysteine S-methyltransferase TRESU_RS09390 PF02310 B12 binding domain TRESU_RS09390 PF00809 Pterin binding enzyme TRESU_RS09400 PF01238 Phosphomannose isomerase type I TRESU_RS09410 PF01048 Phosphorylase superfamily TRESU_RS09415 PF00156 Phosphoribosyl transferase domain TRESU_RS09425 PF01435 Peptidase family M48 TRESU_RS09435 PF01842 ACT domain TRESU_RS09435 PF02153 Prephenate dehydrogenase TRESU_RS09440 PF00793 DAHP synthetase I family TRESU_RS09440 PF18152 DAHP synthase ferredoxin-like domain TRESU_RS09450 PF01053 Cys/Met metabolism PLP-dependent enzyme TRESU_RS09455 PF00773 RNB domain TRESU_RS09460 PF17912 MalK OB fold domain TRESU_RS09460 PF03459 TOBE domain TRESU_RS09460 PF00005 ABC transporter TRESU_RS09465 PF08264 Anticodon-binding domain of tRNA TRESU_RS09465 PF01588 Putative tRNA binding domain TRESU_RS09465 PF09334 tRNA synthetases class I (M) TRESU_RS09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS09470 PF00672 HAMP domain TRESU_RS09470 PF02743 Cache domain TRESU_RS09480 PF01761 3-dehydroquinate synthase TRESU_RS09485 PF00266 Aminotransferase class-V TRESU_RS09495 PF01351 Ribonuclease HII TRESU_RS09505 PF00156 Phosphoribosyl transferase domain TRESU_RS09525 PF00834 Ribulose-phosphate 3 epimerase family TRESU_RS09545 PF01791 DeoC/LacD family aldolase TRESU_RS09550 PF01022 Bacterial regulatory protein, arsR family TRESU_RS09570 PF04055 Radical SAM superfamily TRESU_RS09570 PF00919 Uncharacterized protein family UPF0004 TRESU_RS09585 PF00270 DEAD/DEAH box helicase TRESU_RS09585 PF00271 Helicase conserved C-terminal domain TRESU_RS09600 PF00009 Elongation factor Tu GTP binding domain TRESU_RS09600 PF03764 Elongation factor G, domain IV TRESU_RS09600 PF00679 Elongation factor G C-terminus TRESU_RS09600 PF03144 Elongation factor Tu domain 2 TRESU_RS09600 PF14492 Elongation Factor G, domain II TRESU_RS09630 PF01022 Bacterial regulatory protein, arsR family TRESU_RS09635 PF00293 NUDIX domain TRESU_RS09675 PF03600 Citrate transporter TRESU_RS09695 PF13181 Tetratricopeptide repeat TRESU_RS09695 PF01435 Peptidase family M48 TRESU_RS09715 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS09780 PF07690 Major Facilitator Superfamily TRESU_RS09805 PF01076 Plasmid recombination enzyme TRESU_RS09815 PF02796 Helix-turn-helix domain of resolvase TRESU_RS09815 PF00239 Resolvase, N terminal domain TRESU_RS09835 PF02920 DNA binding domain of tn916 integrase TRESU_RS09835 PF00589 Phage integrase family TRESU_RS09840 PF09035 Excisionase from transposon Tn916 TRESU_RS09860 PF04055 Radical SAM superfamily TRESU_RS09865 PF08241 Methyltransferase domain TRESU_RS09875 PF00679 Elongation factor G C-terminus TRESU_RS09875 PF14492 Elongation Factor G, domain II TRESU_RS09875 PF03764 Elongation factor G, domain IV TRESU_RS09875 PF00009 Elongation factor Tu GTP binding domain TRESU_RS09885 PF02129 X-Pro dipeptidyl-peptidase (S15 family) TRESU_RS09890 PF03466 LysR substrate binding domain TRESU_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TRESU_RS09910 PF02779 Transketolase, pyrimidine binding domain TRESU_RS09910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TRESU_RS09910 PF02780 Transketolase, C-terminal domain TRESU_RS09920 PF00583 Acetyltransferase (GNAT) family TRESU_RS09920 PF14268 YoaP-like TRESU_RS09930 PF08534 Redoxin TRESU_RS09940 PF00293 NUDIX domain TRESU_RS09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS09955 PF05384 Sensor protein DegS TRESU_RS09955 PF07730 Histidine kinase TRESU_RS09965 PF00196 Bacterial regulatory proteins, luxR family TRESU_RS09965 PF00072 Response regulator receiver domain TRESU_RS10010 PF07730 Histidine kinase TRESU_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS10010 PF05384 Sensor protein DegS TRESU_RS10045 PF13186 Iron-sulfur cluster-binding domain TRESU_RS10070 PF00872 Transposase, Mutator family TRESU_RS10075 PF12728 Helix-turn-helix domain TRESU_RS10075 PF02661 Fic/DOC family TRESU_RS10110 PF00145 C-5 cytosine-specific DNA methylase TRESU_RS10115 PF09564 NgoBV restriction endonuclease TRESU_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TRESU_RS10120 PF03466 LysR substrate binding domain TRESU_RS10130 PF01609 Transposase DDE domain TRESU_RS10130 PF13808 DDE_Tnp_1-associated TRESU_RS10150 PF13808 DDE_Tnp_1-associated TRESU_RS10150 PF01609 Transposase DDE domain TRESU_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS10170 PF07730 Histidine kinase TRESU_RS10170 PF13492 GAF domain TRESU_RS10175 PF00072 Response regulator receiver domain TRESU_RS10175 PF00196 Bacterial regulatory proteins, luxR family TRESU_RS10185 PF13173 AAA domain TRESU_RS10185 PF13635 Domain of unknown function (DUF4143) TRESU_RS10190 PF08212 Lipocalin-like domain TRESU_RS10195 PF13087 AAA domain TRESU_RS10195 PF13091 PLD-like domain TRESU_RS10205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) TRESU_RS10205 PF01676 Metalloenzyme superfamily TRESU_RS10220 PF02929 Beta galactosidase small chain TRESU_RS10220 PF16353 Domain of unknown function(DUF4981) TRESU_RS10220 PF00703 Glycosyl hydrolases family 2 TRESU_RS10220 PF02836 Glycosyl hydrolases family 2, TIM barrel domain TRESU_RS10220 PF02837 Glycosyl hydrolases family 2, sugar binding domain TRESU_RS10225 PF13416 Bacterial extracellular solute-binding protein TRESU_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10245 PF00005 ABC transporter TRESU_RS10265 PF12849 PBP superfamily domain TRESU_RS10270 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10275 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10280 PF00005 ABC transporter TRESU_RS10285 PF01895 PhoU domain TRESU_RS10300 PF12792 CSS motif domain associated with EAL TRESU_RS10300 PF00563 EAL domain TRESU_RS10305 PF00072 Response regulator receiver domain TRESU_RS10305 PF00486 Transcriptional regulatory protein, C terminal TRESU_RS10310 PF16736 Single Cache-like TRESU_RS10310 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS10310 PF00989 PAS fold TRESU_RS10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS10315 PF04002 RadC-like JAB domain TRESU_RS10320 PF00595 PDZ domain TRESU_RS10325 PF04851 Type III restriction enzyme, res subunit TRESU_RS10325 PF00271 Helicase conserved C-terminal domain TRESU_RS10325 PF17757 UvrB interaction domain TRESU_RS10325 PF02151 UvrB/uvrC motif TRESU_RS10325 PF12344 Ultra-violet resistance protein B TRESU_RS10340 PF00830 Ribosomal L28 family TRESU_RS10350 PF03099 Biotin/lipoate A/B protein ligase family TRESU_RS10350 PF12706 Beta-lactamase superfamily domain TRESU_RS10355 PF04542 Sigma-70 region 2 TRESU_RS10355 PF04539 Sigma-70 region 3 TRESU_RS10355 PF04545 Sigma-70, region 4 TRESU_RS10355 PF03979 Sigma-70 factor, region 1.1 TRESU_RS10355 PF00140 Sigma-70 factor, region 1.2 TRESU_RS10360 PF00152 tRNA synthetases class II (D, K and N) TRESU_RS10360 PF01336 OB-fold nucleic acid binding domain TRESU_RS10375 PF00117 Glutamine amidotransferase class-I TRESU_RS10375 PF02540 NAD synthase TRESU_RS10375 PF00958 GMP synthase C terminal domain TRESU_RS10380 PF03707 Bacterial signalling protein N terminal repeat TRESU_RS10380 PF00563 EAL domain TRESU_RS10380 PF00990 Diguanylate cyclase, GGDEF domain TRESU_RS10390 PF00691 OmpA family TRESU_RS10405 PF00691 OmpA family TRESU_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10420 PF00005 ABC transporter TRESU_RS10425 PF00497 Bacterial extracellular solute-binding proteins, family 3 TRESU_RS10430 PF00892 EamA-like transporter family TRESU_RS10435 PF18125 RlmM ferredoxin-like domain TRESU_RS10435 PF01728 FtsJ-like methyltransferase TRESU_RS10445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TRESU_RS10445 PF00205 Thiamine pyrophosphate enzyme, central domain TRESU_RS10445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TRESU_RS10450 PF00920 Dehydratase family TRESU_RS10455 PF00814 Glycoprotease family TRESU_RS10465 PF17762 HTH domain found in ParB protein TRESU_RS10465 PF02195 ParB-like nuclease domain TRESU_RS10470 PF13614 AAA domain TRESU_RS10485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TRESU_RS10485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TRESU_RS10485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TRESU_RS10485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TRESU_RS10490 PF00929 Exonuclease TRESU_RS10495 PF01554 MatE TRESU_RS10500 PF01476 LysM domain TRESU_RS10500 PF05257 CHAP domain TRESU_RS10505 PF05173 Dihydrodipicolinate reductase, C-terminus TRESU_RS10505 PF01113 Dihydrodipicolinate reductase, N-terminus TRESU_RS10510 PF00742 Homoserine dehydrogenase TRESU_RS10510 PF01842 ACT domain TRESU_RS10510 PF03447 Homoserine dehydrogenase, NAD binding domain TRESU_RS10510 PF00696 Amino acid kinase family TRESU_RS10510 PF13840 ACT domain TRESU_RS10520 PF04552 Sigma-54, DNA binding domain TRESU_RS10520 PF04963 Sigma-54 factor, core binding domain TRESU_RS10520 PF00309 Sigma-54 factor, Activator interacting domain (AID) TRESU_RS10535 PF02690 Na+/Pi-cotransporter TRESU_RS10550 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain TRESU_RS10550 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain TRESU_RS10560 PF08207 Elongation factor P (EF-P) KOW-like domain TRESU_RS10560 PF01132 Elongation factor P (EF-P) OB domain TRESU_RS10560 PF09285 Elongation factor P, C-terminal TRESU_RS10570 PF13335 Magnesium chelatase, subunit ChlI C-terminal TRESU_RS10570 PF01078 Magnesium chelatase, subunit ChlI TRESU_RS10580 PF16124 RecQ zinc-binding TRESU_RS10580 PF09382 RQC domain TRESU_RS10580 PF00271 Helicase conserved C-terminal domain TRESU_RS10580 PF00270 DEAD/DEAH box helicase TRESU_RS10580 PF00570 HRDC domain TRESU_RS10590 PF01702 Queuine tRNA-ribosyltransferase TRESU_RS10605 PF00692 dUTPase TRESU_RS10610 PF00675 Insulinase (Peptidase family M16) TRESU_RS10610 PF05193 Peptidase M16 inactive domain TRESU_RS10615 PF00013 KH domain TRESU_RS10615 PF01138 3' exoribonuclease family, domain 1 TRESU_RS10615 PF03725 3' exoribonuclease family, domain 2 TRESU_RS10615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TRESU_RS10615 PF00575 S1 RNA binding domain TRESU_RS10620 PF00312 Ribosomal protein S15 TRESU_RS10630 PF02033 Ribosome-binding factor A TRESU_RS10635 PF00009 Elongation factor Tu GTP binding domain TRESU_RS10635 PF11987 Translation-initiation factor 2 TRESU_RS10635 PF04760 Translation initiation factor IF-2, N-terminal region TRESU_RS10640 PF08529 NusA N-terminal domain TRESU_RS10640 PF00575 S1 RNA binding domain TRESU_RS10640 PF13184 NusA-like KH domain TRESU_RS10645 PF02576 RimP N-terminal domain TRESU_RS10645 PF17384 RimP C-terminal SH3 domain TRESU_RS10650 PF13808 DDE_Tnp_1-associated TRESU_RS10650 PF01609 Transposase DDE domain TRESU_RS10665 PF01343 Peptidase family S49 TRESU_RS10670 PF02631 RecX family TRESU_RS10675 PF00380 Ribosomal protein S9/S16 TRESU_RS10680 PF00572 Ribosomal protein L13 TRESU_RS10690 PF02915 Rubrerythrin TRESU_RS10700 PF03591 AzlC protein TRESU_RS10705 PF08402 TOBE domain TRESU_RS10705 PF00005 ABC transporter TRESU_RS10710 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10715 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS10725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TRESU_RS10735 PF00953 Glycosyl transferase family 4 TRESU_RS10740 PF04015 Domain of unknown function (DUF362) TRESU_RS10760 PF00155 Aminotransferase class I and II TRESU_RS10765 PF07724 AAA domain (Cdc48 subfamily) TRESU_RS10765 PF00004 ATPase family associated with various cellular activities (AAA) TRESU_RS10765 PF10431 C-terminal, D2-small domain, of ClpB protein TRESU_RS10765 PF17871 AAA lid domain TRESU_RS10765 PF02861 Clp amino terminal domain, pathogenicity island component TRESU_RS10770 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain TRESU_RS10775 PF02151 UvrB/uvrC motif TRESU_RS10785 PF00005 ABC transporter TRESU_RS10790 PF12704 MacB-like periplasmic core domain TRESU_RS10790 PF02687 FtsX-like permease family TRESU_RS10800 PF00448 SRP54-type protein, GTPase domain TRESU_RS10800 PF02881 SRP54-type protein, helical bundle domain TRESU_RS10810 PF00472 RF-1 domain TRESU_RS10810 PF03462 PCRF domain TRESU_RS10825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TRESU_RS10825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TRESU_RS10845 PF01740 STAS domain TRESU_RS10845 PF00916 Sulfate permease family TRESU_RS10850 PF07650 KH domain TRESU_RS10850 PF01926 50S ribosome-binding GTPase TRESU_RS10855 PF06071 Protein of unknown function (DUF933) TRESU_RS10855 PF01926 50S ribosome-binding GTPase TRESU_RS10860 PF00849 RNA pseudouridylate synthase TRESU_RS10870 PF00155 Aminotransferase class I and II TRESU_RS10870 PF00392 Bacterial regulatory proteins, gntR family TRESU_RS10875 PF00156 Phosphoribosyl transferase domain TRESU_RS10880 PF13291 ACT domain TRESU_RS10880 PF04607 Region found in RelA / SpoT proteins TRESU_RS10880 PF02824 TGS domain TRESU_RS10885 PF01136 Peptidase family U32 TRESU_RS10885 PF16325 Peptidase family U32 C-terminal domain TRESU_RS10895 PF04204 Homoserine O-succinyltransferase TRESU_RS10905 PF01555 DNA methylase TRESU_RS10915 PF02796 Helix-turn-helix domain of resolvase TRESU_RS10915 PF00239 Resolvase, N terminal domain TRESU_RS10930 PF00672 HAMP domain TRESU_RS10930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS10930 PF02743 Cache domain TRESU_RS10935 PF00478 IMP dehydrogenase / GMP reductase domain TRESU_RS10935 PF00571 CBS domain TRESU_RS10940 PF00709 Adenylosuccinate synthetase TRESU_RS10945 PF01554 MatE TRESU_RS10955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TRESU_RS10955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TRESU_RS10960 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TRESU_RS10960 PF14572 Phosphoribosyl synthetase-associated domain TRESU_RS10975 PF01554 MatE TRESU_RS10980 PF01063 Amino-transferase class IV TRESU_RS11000 PF01515 Phosphate acetyl/butaryl transferase TRESU_RS11015 PF01921 tRNA synthetases class I (K) TRESU_RS11025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TRESU_RS11025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TRESU_RS11025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TRESU_RS11025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TRESU_RS11045 PF00005 ABC transporter TRESU_RS11045 PF12848 ABC transporter TRESU_RS11065 PF13808 DDE_Tnp_1-associated TRESU_RS11065 PF01609 Transposase DDE domain TRESU_RS11075 PF09827 CRISPR associated protein Cas2 TRESU_RS11080 PF09827 CRISPR associated protein Cas2 TRESU_RS11085 PF01867 CRISPR associated protein Cas1 TRESU_RS11130 PF03787 RAMP superfamily TRESU_RS11140 PF01966 HD domain TRESU_RS11140 PF18211 Csm1 subunit domain B TRESU_RS11150 PF01301 Glycosyl hydrolases family 35 TRESU_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS11175 PF13416 Bacterial extracellular solute-binding protein TRESU_RS11180 PF00356 Bacterial regulatory proteins, lacI family TRESU_RS11180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family TRESU_RS11185 PF01081 KDPG and KHG aldolase TRESU_RS11190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain TRESU_RS11190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TRESU_RS11200 PF13722 5TM C-terminal transporter carbon starvation CstA TRESU_RS11200 PF02554 Carbon starvation protein CstA TRESU_RS11210 PF00365 Phosphofructokinase TRESU_RS11215 PF04011 LemA family TRESU_RS11225 PF01339 CheB methylesterase TRESU_RS11225 PF00072 Response regulator receiver domain TRESU_RS11230 PF03705 CheR methyltransferase, all-alpha domain TRESU_RS11230 PF01739 CheR methyltransferase, SAM binding domain TRESU_RS11235 PF10145 Phage-related minor tail protein TRESU_RS11235 PF01464 Transglycosylase SLT domain TRESU_RS11235 PF01551 Peptidase family M23 TRESU_RS11240 PF01728 FtsJ-like methyltransferase TRESU_RS11245 PF00501 AMP-binding enzyme TRESU_RS11255 PF13411 MerR HTH family regulatory protein TRESU_RS11260 PF01926 50S ribosome-binding GTPase TRESU_RS11260 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TRESU_RS11265 PF05524 PEP-utilising enzyme, N-terminal TRESU_RS11265 PF00391 PEP-utilising enzyme, mobile domain TRESU_RS11265 PF02896 PEP-utilising enzyme, TIM barrel domain TRESU_RS11285 PF03099 Biotin/lipoate A/B protein ligase family TRESU_RS11285 PF02237 Biotin protein ligase C terminal domain TRESU_RS11285 PF08279 HTH domain TRESU_RS11300 PF02664 S-Ribosylhomocysteinase (LuxS) TRESU_RS11305 PF13419 Haloacid dehalogenase-like hydrolase TRESU_RS11310 PF02127 Aminopeptidase I zinc metalloprotease (M18) TRESU_RS11320 PF02542 YgbB family TRESU_RS11320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TRESU_RS11425 PF02522 Aminoglycoside 3-N-acetyltransferase TRESU_RS11455 PF05384 Sensor protein DegS TRESU_RS11455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS11455 PF07730 Histidine kinase TRESU_RS11460 PF00072 Response regulator receiver domain TRESU_RS11460 PF00196 Bacterial regulatory proteins, luxR family TRESU_RS11520 PF00266 Aminotransferase class-V TRESU_RS11525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TRESU_RS11525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TRESU_RS11525 PF01842 ACT domain TRESU_RS11530 PF02583 Metal-sensitive transcriptional repressor TRESU_RS11540 PF00403 Heavy-metal-associated domain TRESU_RS11550 PF00271 Helicase conserved C-terminal domain TRESU_RS11550 PF00570 HRDC domain TRESU_RS11550 PF09382 RQC domain TRESU_RS11550 PF16124 RecQ zinc-binding TRESU_RS11550 PF00270 DEAD/DEAH box helicase TRESU_RS11555 PF00999 Sodium/hydrogen exchanger family TRESU_RS11560 PF01209 ubiE/COQ5 methyltransferase family TRESU_RS11565 PF02603 HPr Serine kinase N terminus TRESU_RS11565 PF07475 HPr Serine kinase C-terminal domain TRESU_RS11570 PF00381 PTS HPr component phosphorylation site TRESU_RS11575 PF01726 LexA DNA binding domain TRESU_RS11575 PF00717 Peptidase S24-like TRESU_RS11585 PF01479 S4 domain TRESU_RS11585 PF00163 Ribosomal protein S4/S9 N-terminal domain TRESU_RS11590 PF07238 PilZ domain TRESU_RS11610 PF00027 Cyclic nucleotide-binding domain TRESU_RS11610 PF13545 Crp-like helix-turn-helix domain TRESU_RS11615 PF01565 FAD binding domain TRESU_RS11615 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TRESU_RS11620 PF01406 tRNA synthetases class I (C) catalytic domain TRESU_RS11620 PF09190 DALR domain TRESU_RS11625 PF08281 Sigma-70, region 4 TRESU_RS11625 PF04542 Sigma-70 region 2 TRESU_RS11635 PF02806 Alpha amylase, C-terminal all-beta domain TRESU_RS11635 PF00686 Starch binding domain TRESU_RS11635 PF01833 IPT/TIG domain TRESU_RS11635 PF00128 Alpha amylase, catalytic domain TRESU_RS11640 PF00696 Amino acid kinase family TRESU_RS11645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase TRESU_RS11650 PF02843 Phosphoribosylglycinamide synthetase, C domain TRESU_RS11650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TRESU_RS11650 PF02844 Phosphoribosylglycinamide synthetase, N domain TRESU_RS11655 PF02673 Bacitracin resistance protein BacA TRESU_RS11660 PF02254 TrkA-N domain TRESU_RS11660 PF02080 TrkA-C domain TRESU_RS11665 PF02386 Cation transport protein TRESU_RS11675 PF01039 Carboxyl transferase domain TRESU_RS11685 PF01145 SPFH domain / Band 7 family TRESU_RS11690 PF01145 SPFH domain / Band 7 family TRESU_RS11705 PF01381 Helix-turn-helix TRESU_RS11725 PF04468 PSP1 C-terminal conserved region TRESU_RS11740 PF01551 Peptidase family M23 TRESU_RS11740 PF04225 Opacity-associated protein A LysM-like domain TRESU_RS11745 PF01026 TatD related DNase TRESU_RS11750 PF01207 Dihydrouridine synthase (Dus) TRESU_RS11760 PF01590 GAF domain TRESU_RS11760 PF00563 EAL domain TRESU_RS11760 PF00360 Phytochrome region TRESU_RS11760 PF00990 Diguanylate cyclase, GGDEF domain TRESU_RS11780 PF01409 tRNA synthetases class II core domain (F) TRESU_RS11790 PF06745 KaiC TRESU_RS11790 PF18073 Rubredoxin metal binding domain TRESU_RS11815 PF02511 Thymidylate synthase complementing protein TRESU_RS11830 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS11830 PF01548 Transposase TRESU_RS11840 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system TRESU_RS11855 PF13635 Domain of unknown function (DUF4143) TRESU_RS11855 PF13173 AAA domain TRESU_RS11865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain TRESU_RS11865 PF00753 Metallo-beta-lactamase superfamily TRESU_RS11865 PF10996 Beta-Casp domain TRESU_RS11870 PF04102 SlyX TRESU_RS11875 PF03006 Haemolysin-III related TRESU_RS11880 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS11885 PF00005 ABC transporter TRESU_RS11895 PF00113 Enolase, C-terminal TIM barrel domain TRESU_RS11895 PF03952 Enolase, N-terminal domain TRESU_RS11915 PF03600 Citrate transporter TRESU_RS11920 PF00005 ABC transporter TRESU_RS11950 PF00211 Adenylate and Guanylate cyclase catalytic domain TRESU_RS11950 PF00072 Response regulator receiver domain TRESU_RS11965 PF00596 Class II Aldolase and Adducin N-terminal domain TRESU_RS11975 PF13407 Periplasmic binding protein domain TRESU_RS11980 PF00005 ABC transporter TRESU_RS11985 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS11990 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS11995 PF12833 Helix-turn-helix domain TRESU_RS11995 PF17853 GGDEF-like domain TRESU_RS12000 PF00669 Bacterial flagellin N-terminal helical region TRESU_RS12000 PF00700 Bacterial flagellin C-terminal helical region TRESU_RS12010 PF02805 Metal binding domain of Ada TRESU_RS12010 PF12833 Helix-turn-helix domain TRESU_RS12015 PF02441 Flavoprotein TRESU_RS12015 PF04127 DNA / pantothenate metabolism flavoprotein TRESU_RS12020 PF00924 Mechanosensitive ion channel TRESU_RS12035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TRESU_RS12075 PF02229 Transcriptional Coactivator p15 (PC4) TRESU_RS12090 PF00293 NUDIX domain TRESU_RS12100 PF01380 SIS domain TRESU_RS12115 PF00730 HhH-GPD superfamily base excision DNA repair protein TRESU_RS12120 PF00438 S-adenosylmethionine synthetase, N-terminal domain TRESU_RS12120 PF02772 S-adenosylmethionine synthetase, central domain TRESU_RS12120 PF02773 S-adenosylmethionine synthetase, C-terminal domain TRESU_RS12135 PF00248 Aldo/keto reductase family TRESU_RS12150 PF00005 ABC transporter TRESU_RS12155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TRESU_RS12155 PF03466 LysR substrate binding domain TRESU_RS12165 PF01609 Transposase DDE domain TRESU_RS12165 PF13808 DDE_Tnp_1-associated TRESU_RS12170 PF00348 Polyprenyl synthetase TRESU_RS12195 PF12399 Branched-chain amino acid ATP-binding cassette transporter TRESU_RS12195 PF00005 ABC transporter TRESU_RS12220 PF13808 DDE_Tnp_1-associated TRESU_RS12220 PF01609 Transposase DDE domain TRESU_RS12225 PF02629 CoA binding domain TRESU_RS12225 PF06971 Putative DNA-binding protein N-terminus TRESU_RS12245 PF00588 SpoU rRNA Methylase family TRESU_RS12245 PF08032 RNA 2'-O ribose methyltransferase substrate binding TRESU_RS12250 PF02810 SEC-C motif TRESU_RS12255 PF00501 AMP-binding enzyme TRESU_RS12255 PF14535 AMP-binding enzyme C-terminal domain TRESU_RS12265 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TRESU_RS12265 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TRESU_RS12285 PF00999 Sodium/hydrogen exchanger family TRESU_RS12305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TRESU_RS12325 PF01204 Trehalase TRESU_RS12330 PF02541 Ppx/GppA phosphatase family TRESU_RS12335 PF02503 Polyphosphate kinase middle domain TRESU_RS12335 PF17941 Polyphosphate kinase C-terminal domain 1 TRESU_RS12335 PF13089 Polyphosphate kinase N-terminal domain TRESU_RS12335 PF13090 Polyphosphate kinase C-terminal domain 2 TRESU_RS12340 PF01176 Translation initiation factor 1A / IF-1 TRESU_RS12345 PF01258 Prokaryotic dksA/traR C4-type zinc finger TRESU_RS12355 PF00072 Response regulator receiver domain TRESU_RS12355 PF01339 CheB methylesterase TRESU_RS12375 PF01613 Flavin reductase like domain TRESU_RS12385 PF00571 CBS domain TRESU_RS12385 PF00478 IMP dehydrogenase / GMP reductase domain TRESU_RS12390 PF00005 ABC transporter TRESU_RS12395 PF00005 ABC transporter TRESU_RS12395 PF12399 Branched-chain amino acid ATP-binding cassette transporter TRESU_RS12400 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS12400 PF11862 Domain of unknown function (DUF3382) TRESU_RS12405 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS12410 PF13458 Periplasmic binding protein TRESU_RS12420 PF01196 Ribosomal protein L17 TRESU_RS12425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TRESU_RS12425 PF01000 RNA polymerase Rpb3/RpoA insert domain TRESU_RS12425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TRESU_RS12430 PF00411 Ribosomal protein S11 TRESU_RS12435 PF00416 Ribosomal protein S13/S18 TRESU_RS12440 PF00344 SecY translocase TRESU_RS12445 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TRESU_RS12450 PF00327 Ribosomal protein L30p/L7e TRESU_RS12455 PF03719 Ribosomal protein S5, C-terminal domain TRESU_RS12455 PF00333 Ribosomal protein S5, N-terminal domain TRESU_RS12460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TRESU_RS12465 PF00347 Ribosomal protein L6 TRESU_RS12470 PF00410 Ribosomal protein S8 TRESU_RS12475 PF00673 ribosomal L5P family C-terminus TRESU_RS12475 PF00281 Ribosomal protein L5 TRESU_RS12480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TRESU_RS12480 PF00467 KOW motif TRESU_RS12485 PF00238 Ribosomal protein L14p/L23e TRESU_RS12490 PF00366 Ribosomal protein S17 TRESU_RS12495 PF00831 Ribosomal L29 protein TRESU_RS12500 PF00252 Ribosomal protein L16p/L10e TRESU_RS12505 PF07650 KH domain TRESU_RS12505 PF00189 Ribosomal protein S3, C-terminal domain TRESU_RS12510 PF00237 Ribosomal protein L22p/L17e TRESU_RS12515 PF00203 Ribosomal protein S19 TRESU_RS12520 PF00181 Ribosomal Proteins L2, RNA binding domain TRESU_RS12520 PF03947 Ribosomal Proteins L2, C-terminal domain TRESU_RS12525 PF00276 Ribosomal protein L23 TRESU_RS12530 PF00573 Ribosomal protein L4/L1 family TRESU_RS12535 PF00297 Ribosomal protein L3 TRESU_RS12540 PF00338 Ribosomal protein S10p/S20e TRESU_RS12545 PF03143 Elongation factor Tu C-terminal domain TRESU_RS12545 PF03144 Elongation factor Tu domain 2 TRESU_RS12545 PF00009 Elongation factor Tu GTP binding domain TRESU_RS12550 PF00177 Ribosomal protein S7p/S5e TRESU_RS12555 PF00164 Ribosomal protein S12/S23 TRESU_RS12560 PF04983 RNA polymerase Rpb1, domain 3 TRESU_RS12560 PF05000 RNA polymerase Rpb1, domain 4 TRESU_RS12560 PF04997 RNA polymerase Rpb1, domain 1 TRESU_RS12560 PF00623 RNA polymerase Rpb1, domain 2 TRESU_RS12560 PF04998 RNA polymerase Rpb1, domain 5 TRESU_RS12565 PF04563 RNA polymerase beta subunit TRESU_RS12565 PF04561 RNA polymerase Rpb2, domain 2 TRESU_RS12565 PF04565 RNA polymerase Rpb2, domain 3 TRESU_RS12565 PF10385 RNA polymerase beta subunit external 1 domain TRESU_RS12565 PF00562 RNA polymerase Rpb2, domain 6 TRESU_RS12565 PF04560 RNA polymerase Rpb2, domain 7 TRESU_RS12570 PF16320 Ribosomal protein L7/L12 dimerisation domain TRESU_RS12570 PF00542 Ribosomal protein L7/L12 C-terminal domain TRESU_RS12575 PF00466 Ribosomal protein L10 TRESU_RS12580 PF00687 Ribosomal protein L1p/L10e family TRESU_RS12585 PF00298 Ribosomal protein L11, RNA binding domain TRESU_RS12585 PF03946 Ribosomal protein L11, N-terminal domain TRESU_RS12590 PF02357 Transcription termination factor nusG TRESU_RS12590 PF00467 KOW motif TRESU_RS12595 PF00584 SecE/Sec61-gamma subunits of protein translocation complex TRESU_RS12605 PF00471 Ribosomal protein L33 TRESU_RS12615 PF00132 Bacterial transferase hexapeptide (six repeats) TRESU_RS12650 PF03422 Carbohydrate binding module (family 6) TRESU_RS12650 PF00457 Glycosyl hydrolases family 11 TRESU_RS12650 PF01522 Polysaccharide deacetylase TRESU_RS12665 PF10609 NUBPL iron-transfer P-loop NTPase TRESU_RS12670 PF01790 Prolipoprotein diacylglyceryl transferase TRESU_RS12680 PF02142 MGS-like domain TRESU_RS12680 PF01808 AICARFT/IMPCHase bienzyme TRESU_RS12685 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TRESU_RS12685 PF01502 Phosphoribosyl-AMP cyclohydrolase TRESU_RS12690 PF01979 Amidohydrolase family TRESU_RS12695 PF00563 EAL domain TRESU_RS12695 PF03707 Bacterial signalling protein N terminal repeat TRESU_RS12695 PF00990 Diguanylate cyclase, GGDEF domain TRESU_RS12700 PF08497 Radical SAM N-terminal TRESU_RS12700 PF04055 Radical SAM superfamily TRESU_RS12700 PF11842 Domain of unknown function (DUF3362) TRESU_RS12720 PF01336 OB-fold nucleic acid binding domain TRESU_RS12720 PF02938 GAD domain TRESU_RS12720 PF00152 tRNA synthetases class II (D, K and N) TRESU_RS12730 PF00759 Glycosyl hydrolase family 9 TRESU_RS12730 PF02927 Cellulase N-terminal ig-like domain TRESU_RS12735 PF02446 4-alpha-glucanotransferase TRESU_RS12740 PF00356 Bacterial regulatory proteins, lacI family TRESU_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS12765 PF00474 Sodium:solute symporter family TRESU_RS12775 PF02653 Branched-chain amino acid transport system / permease component TRESU_RS12780 PF00005 ABC transporter TRESU_RS12780 PF09383 NIL domain TRESU_RS12790 PF04452 RNA methyltransferase TRESU_RS12800 PF00528 Binding-protein-dependent transport system inner membrane component TRESU_RS12805 PF00005 ABC transporter TRESU_RS12805 PF09383 NIL domain TRESU_RS12810 PF00849 RNA pseudouridylate synthase TRESU_RS12810 PF01479 S4 domain TRESU_RS12820 PF14537 Cytochrome c3 TRESU_RS12820 PF00890 FAD binding domain TRESU_RS12830 PF05167 Uncharacterised ACR (DUF711) TRESU_RS12835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TRESU_RS12850 PF01252 Signal peptidase (SPase) II TRESU_RS12855 PF12850 Calcineurin-like phosphoesterase superfamily domain TRESU_RS12870 PF00588 SpoU rRNA Methylase family TRESU_RS12875 PF00465 Iron-containing alcohol dehydrogenase TRESU_RS12885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TRESU_RS12890 PF09397 Ftsk gamma domain TRESU_RS12890 PF17854 FtsK alpha domain TRESU_RS12890 PF01580 FtsK/SpoIIIE family TRESU_RS12895 PF00704 Glycosyl hydrolases family 18 TRESU_RS12905 PF03180 NLPA lipoprotein TRESU_RS12915 PF00155 Aminotransferase class I and II TRESU_RS12920 PF01037 Lrp/AsnC ligand binding domain TRESU_RS12925 PF00475 Imidazoleglycerol-phosphate dehydratase TRESU_RS12930 PF01634 ATP phosphoribosyltransferase TRESU_RS12930 PF08029 HisG, C-terminal domain TRESU_RS12935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) TRESU_RS12940 PF08501 Shikimate dehydrogenase substrate binding domain TRESU_RS12940 PF01488 Shikimate / quinate 5-dehydrogenase TRESU_RS12940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain TRESU_RS12950 PF00271 Helicase conserved C-terminal domain TRESU_RS12950 PF04851 Type III restriction enzyme, res subunit TRESU_RS12955 PF02915 Rubrerythrin TRESU_RS12975 PF01170 Putative RNA methylase family UPF0020 TRESU_RS12975 PF02926 THUMP domain TRESU_RS12980 PF13808 DDE_Tnp_1-associated TRESU_RS12980 PF01609 Transposase DDE domain TRESU_RS12985 PF03852 DNA mismatch endonuclease Vsr TRESU_RS13015 PF00440 Bacterial regulatory proteins, tetR family TRESU_RS13015 PF13977 BetI-type transcriptional repressor, C-terminal TRESU_RS13025 PF00150 Cellulase (glycosyl hydrolase family 5) TRESU_RS13030 PF00722 Glycosyl hydrolases family 16 TRESU_RS13045 PF01381 Helix-turn-helix TRESU_RS13060 PF00575 S1 RNA binding domain TRESU_RS13065 PF00293 NUDIX domain TRESU_RS13075 PF00696 Amino acid kinase family TRESU_RS13075 PF00583 Acetyltransferase (GNAT) family TRESU_RS13080 PF00521 DNA gyrase/topoisomerase IV, subunit A TRESU_RS13080 PF03989 DNA gyrase C-terminal domain, beta-propeller TRESU_RS13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS13085 PF01751 Toprim domain TRESU_RS13085 PF00986 DNA gyrase B subunit, carboxyl terminus TRESU_RS13085 PF00204 DNA gyrase B TRESU_RS13110 PF11638 DnaA N-terminal domain TRESU_RS13110 PF08299 Bacterial dnaA protein helix-turn-helix TRESU_RS13110 PF00308 Bacterial dnaA protein TRESU_RS13275 PF00691 OmpA family TRESU_RS13275 PF13488 Glycine zipper TRESU_RS13415 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain TRESU_RS13415 PF04616 Glycosyl hydrolases family 43 TRESU_RS13470 PF03572 Peptidase family S41 TRESU_RS13470 PF01471 Putative peptidoglycan binding domain TRESU_RS13470 PF17820 PDZ domain TRESU_RS13920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS13920 PF00672 HAMP domain TRESU_RS13920 PF12729 Four helix bundle sensory module for signal transduction TRESU_RS13930 PF00158 Sigma-54 interaction domain TRESU_RS13930 PF02954 Bacterial regulatory protein, Fis family TRESU_RS13930 PF13185 GAF domain TRESU_RS13945 PF00186 Dihydrofolate reductase TRESU_RS13955 PF08448 PAS fold TRESU_RS13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS13955 PF00072 Response regulator receiver domain TRESU_RS13955 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS13955 PF13426 PAS domain TRESU_RS13960 PF14622 Ribonuclease-III-like TRESU_RS13960 PF00035 Double-stranded RNA binding motif TRESU_RS13980 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) TRESU_RS13980 PF12354 Bacterial adhesion/invasion protein N terminal TRESU_RS13980 PF00746 LPXTG cell wall anchor motif TRESU_RS13980 PF12799 Leucine Rich repeats (2 copies) TRESU_RS13980 PF08191 LRR adjacent TRESU_RS14005 PF01551 Peptidase family M23 TRESU_RS14015 PF00768 D-alanyl-D-alanine carboxypeptidase TRESU_RS14015 PF07943 Penicillin-binding protein 5, C-terminal domain TRESU_RS14025 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS14035 PF00672 HAMP domain TRESU_RS14035 PF02743 Cache domain TRESU_RS14040 PF07728 AAA domain (dynein-related subfamily) TRESU_RS14050 PF04991 LicD family TRESU_RS14075 PF01548 Transposase TRESU_RS14075 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS14125 PF01548 Transposase TRESU_RS14125 PF02371 Transposase IS116/IS110/IS902 family TRESU_RS14145 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS14150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS14150 PF00672 HAMP domain TRESU_RS14150 PF17202 Single cache domain 3 TRESU_RS14155 PF04327 Cysteine protease Prp TRESU_RS14160 PF00072 Response regulator receiver domain TRESU_RS14160 PF00512 His Kinase A (phospho-acceptor) domain TRESU_RS14160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TRESU_RS14160 PF09308 LuxQ, periplasmic TRESU_RS14165 PF00486 Transcriptional regulatory protein, C terminal TRESU_RS14165 PF00072 Response regulator receiver domain TRESU_RS14180 PF01596 O-methyltransferase TRESU_RS14230 PF12796 Ankyrin repeats (3 copies) TRESU_RS14235 PF04991 LicD family TRESU_RS14250 PF03646 FlaG protein TRESU_RS14280 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS14285 PF09556 HaeIII restriction endonuclease TRESU_RS14305 PF01171 PP-loop family TRESU_RS14315 PF01609 Transposase DDE domain TRESU_RS14315 PF13808 DDE_Tnp_1-associated TRESU_RS14320 PF00672 HAMP domain TRESU_RS14320 PF00211 Adenylate and Guanylate cyclase catalytic domain TRESU_RS14320 PF02743 Cache domain TRESU_RS14325 PF01609 Transposase DDE domain TRESU_RS14325 PF13808 DDE_Tnp_1-associated TRESU_RS14330 PF13808 DDE_Tnp_1-associated TRESU_RS14330 PF01609 Transposase DDE domain TRESU_RS14360 PF01509 TruB family pseudouridylate synthase (N terminal domain) TRESU_RS14365 PF00072 Response regulator receiver domain TRESU_RS14370 PF00990 Diguanylate cyclase, GGDEF domain TRESU_RS14370 PF00072 Response regulator receiver domain TRESU_RS14390 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS14400 PF02743 Cache domain TRESU_RS14400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TRESU_RS14400 PF00672 HAMP domain TRESU_RS14425 PF01202 Shikimate kinase TRESU_RS14430 PF03781 Sulfatase-modifying factor enzyme 1 TRESU_RS14440 PF01966 HD domain TRESU_RS14445 PF01180 Dihydroorotate dehydrogenase