TRESU_RS00005 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain TRESU_RS00010 SM00480 DNA polymerase III beta subunit TRESU_RS00035 SM01234 TRESU_RS00035 TRESU_RS00045 SM00393 Putative single-stranded nucleic acids-binding domain TRESU_RS00045 SM01245 TRESU_RS00045 TRESU_RS00070 SM00345 helix_turn_helix gluconate operon transcriptional repressor TRESU_RS00080 SM01103 TRESU_RS00080 TRESU_RS00095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TRESU_RS00100 SM00851 MGS-like domain TRESU_RS00100 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TRESU_RS00130 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00175 SM00226 Low molecular weight phosphatase family TRESU_RS00200 SM00155 Phospholipase D. Active site motifs. TRESU_RS00205 SM01211 TRESU_RS00205 TRESU_RS00215 SM01091 Transporter associated domain TRESU_RS00220 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS00220 SM01091 Transporter associated domain TRESU_RS00235 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00255 SM01068 Putative carbohydrate binding domain TRESU_RS00280 SM00354 helix_turn _helix lactose operon repressor TRESU_RS00295 SM00493 TRESU_RS00295 TRESU_RS00335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS00335 SM00245 tail specific protease TRESU_RS00380 SM00740 TRESU_RS00380 TRESU_RS00395 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00415 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS00415 SM00876 Biotin and Thiamin Synthesis associated domain TRESU_RS00425 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00610 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00640 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS00700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS00700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS00710 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00730 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00735 SM00382 ATPases associated with a variety of cellular activities TRESU_RS00880 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TRESU_RS00900 SM00633 Glycosyl hydrolase family 10 TRESU_RS00910 SM00354 helix_turn _helix lactose operon repressor TRESU_RS00960 SM00481 DNA polymerase alpha chain like domain TRESU_RS00965 SM00100 Cyclic nucleotide-monophosphate binding domain TRESU_RS00990 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS00990 SM00732 Likely ribonuclease with RNase H fold. TRESU_RS01055 SM00487 DEAD-like helicases superfamily TRESU_RS01090 SM01012 TRESU_RS01090 TRESU_RS01095 SM01230 TRESU_RS01095 TRESU_RS01100 SM01230 TRESU_RS01100 TRESU_RS01115 SM00938 Nitrogen regulatory protein P-II TRESU_RS01120 SM00710 Parallel beta-helix repeats TRESU_RS01155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS01160 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS01160 SM00448 cheY-homologous receiver domain TRESU_RS01185 SM00327 von Willebrand factor (vWF) type A domain TRESU_RS01190 SM00028 Tetratricopeptide repeats TRESU_RS01190 SM00327 von Willebrand factor (vWF) type A domain TRESU_RS01200 SM00463 Small MutS-related domain TRESU_RS01205 SM00271 DnaJ molecular chaperone homology domain TRESU_RS01345 SM00873 B3/4 domain TRESU_RS01345 SM00874 tRNA synthetase B5 domain TRESU_RS01350 SM01126 TRESU_RS01350 TRESU_RS01435 SM01126 TRESU_RS01435 TRESU_RS01490 SM00998 Adenylosuccinate lyase C-terminus TRESU_RS01510 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS01540 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS01545 SM00487 DEAD-like helicases superfamily TRESU_RS01545 SM00490 helicase superfamily c-terminal domain TRESU_RS01585 SM00857 Resolvase, N terminal domain TRESU_RS01635 SM00382 ATPases associated with a variety of cellular activities TRESU_RS01670 SM00220 Serine/Threonine protein kinases, catalytic domain TRESU_RS01715 SM00506 Appr-1"-p processing enzyme TRESU_RS01755 SM00967 RNA 2'-O ribose methyltransferase substrate binding TRESU_RS01800 SM00387 Histidine kinase-like ATPases TRESU_RS01800 SM00433 TopoisomeraseII TRESU_RS01805 SM00434 DNA Topoisomerase IV TRESU_RS01890 SM01126 TRESU_RS01890 TRESU_RS01905 SM00740 TRESU_RS01905 TRESU_RS01930 SM00849 Metallo-beta-lactamase superfamily TRESU_RS01980 SM00859 Semialdehyde dehydrogenase, NAD binding domain TRESU_RS01985 SM01130 TRESU_RS01985 TRESU_RS01990 SM00421 helix_turn_helix, Lux Regulon TRESU_RS02010 SM01329 TRESU_RS02010 TRESU_RS02020 SM00271 DnaJ molecular chaperone homology domain TRESU_RS02035 SM00845 GatB domain TRESU_RS02055 SM01217 TRESU_RS02055 TRESU_RS02060 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS02070 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TRESU_RS02075 SM00822 TRESU_RS02075 TRESU_RS02080 SM00825 Beta-ketoacyl synthase TRESU_RS02095 SM00562 TRESU_RS02095 TRESU_RS02105 SM00382 ATPases associated with a variety of cellular activities TRESU_RS02105 SM00962 SRP54-type protein, GTPase domain TRESU_RS02105 SM00963 SRP54-type protein, helical bundle domain TRESU_RS02150 SM00642 Alpha-amylase domain TRESU_RS02240 SM00954 Region found in RelA / SpoT proteins TRESU_RS02245 SM00529 Helix-turn-helix diphteria tox regulatory element TRESU_RS02255 SM00062 Bacterial periplasmic substrate-binding proteins TRESU_RS02265 SM00382 ATPases associated with a variety of cellular activities TRESU_RS02275 SM01131 TRESU_RS02275 TRESU_RS02285 SM00382 ATPases associated with a variety of cellular activities TRESU_RS02305 SM00363 S4 RNA-binding domain TRESU_RS02315 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TRESU_RS02315 SM00474 3'-5' exonuclease TRESU_RS02315 SM00475 5'-3' exonuclease TRESU_RS02315 SM00482 DNA polymerase A domain TRESU_RS02345 SM00900 TRESU_RS02345 TRESU_RS02380 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TRESU_RS02395 SM00028 Tetratricopeptide repeats TRESU_RS02400 SM00883 Chaperonin 10 Kd subunit TRESU_RS02410 SM00487 DEAD-like helicases superfamily TRESU_RS02410 SM00490 helicase superfamily c-terminal domain TRESU_RS02420 SM00481 DNA polymerase alpha chain like domain TRESU_RS02425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS02425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS02490 SM00642 Alpha-amylase domain TRESU_RS02535 SM00859 Semialdehyde dehydrogenase, NAD binding domain TRESU_RS02555 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS02570 SM00028 Tetratricopeptide repeats TRESU_RS02660 SM00487 DEAD-like helicases superfamily TRESU_RS02765 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS02775 SM00421 helix_turn_helix, Lux Regulon TRESU_RS02775 SM00448 cheY-homologous receiver domain TRESU_RS02785 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS02905 SM00487 DEAD-like helicases superfamily TRESU_RS02925 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS02950 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS02950 SM00924 MgtE intracellular N domain TRESU_RS02970 SM00487 DEAD-like helicases superfamily TRESU_RS03055 SM00986 Uracil DNA glycosylase superfamily TRESU_RS03055 SM00987 UreE urease accessory protein, C-terminal domain TRESU_RS03095 SM00836 DALR anticodon binding domain TRESU_RS03095 SM01016 Arginyl tRNA synthetase N terminal dom TRESU_RS03115 SM00271 DnaJ molecular chaperone homology domain TRESU_RS03120 SM00331 Sigma factor PP2C-like phosphatases TRESU_RS03165 SM00382 ATPases associated with a variety of cellular activities TRESU_RS03170 SM00849 Metallo-beta-lactamase superfamily TRESU_RS03200 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS03210 SM00833 Cobalamin synthesis protein cobW C-terminal domain TRESU_RS03215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS03215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS03240 SM01144 TRESU_RS03240 TRESU_RS03270 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS03585 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS03600 SM01126 TRESU_RS03600 TRESU_RS03605 SM01324 TRESU_RS03605 TRESU_RS03640 SM00248 ankyrin repeats TRESU_RS03655 SM00966 SpoVT / AbrB like domain TRESU_RS03775 SM00966 SpoVT / AbrB like domain TRESU_RS03910 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS03920 SM00954 Region found in RelA / SpoT proteins TRESU_RS03965 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS04020 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS04145 SM01228 TRESU_RS04145 TRESU_RS04165 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TRESU_RS04175 SM00363 S4 RNA-binding domain TRESU_RS04190 SM00917 LeuA allosteric (dimerisation) domain TRESU_RS04195 SM01329 TRESU_RS04195 TRESU_RS04200 SM00387 Histidine kinase-like ATPases TRESU_RS04200 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS04200 SM00448 cheY-homologous receiver domain TRESU_RS04215 SM00899 TRESU_RS04215 TRESU_RS04220 SM00899 TRESU_RS04220 TRESU_RS04250 SM00642 Alpha-amylase domain TRESU_RS04270 SM00465 GIY-YIG type nucleases (URI domain) TRESU_RS04280 SM00028 Tetratricopeptide repeats TRESU_RS04285 SM01001 AIR carboxylase TRESU_RS04365 SM00382 ATPases associated with a variety of cellular activities TRESU_RS04515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRESU_RS04550 SM01323 TRESU_RS04550 TRESU_RS04590 SM00382 ATPases associated with a variety of cellular activities TRESU_RS04660 SM00382 ATPases associated with a variety of cellular activities TRESU_RS04675 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS04710 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS04725 SM00640 Glycosyl hydrolases family 32 TRESU_RS04855 SM00507 HNH nucleases TRESU_RS04880 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS04935 SM00937 TRESU_RS04935 TRESU_RS04960 SM00382 ATPases associated with a variety of cellular activities TRESU_RS04975 SM00463 Small MutS-related domain TRESU_RS04975 SM00534 ATPase domain of DNA mismatch repair MUTS family TRESU_RS05055 SM00322 K homology RNA-binding domain TRESU_RS05055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRESU_RS05180 SM01126 TRESU_RS05180 TRESU_RS05220 SM00382 ATPases associated with a variety of cellular activities TRESU_RS05220 SM00464 Found in ATP-dependent protease La (LON) TRESU_RS05260 SM00240 Forkhead associated domain TRESU_RS05270 SM00220 Serine/Threonine protein kinases, catalytic domain TRESU_RS05300 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRESU_RS05300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRESU_RS05360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRESU_RS05365 SM00382 ATPases associated with a variety of cellular activities TRESU_RS05385 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain TRESU_RS05445 SM00028 Tetratricopeptide repeats TRESU_RS05480 SM00292 breast cancer carboxy-terminal domain TRESU_RS05480 SM00532 Ligase N family TRESU_RS05495 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TRESU_RS05540 SM00487 DEAD-like helicases superfamily TRESU_RS05665 SM00487 DEAD-like helicases superfamily TRESU_RS05725 SM00382 ATPases associated with a variety of cellular activities TRESU_RS05735 SM00382 ATPases associated with a variety of cellular activities TRESU_RS05740 SM00470 ParB-like nuclease domain TRESU_RS05795 SM00028 Tetratricopeptide repeats TRESU_RS05845 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS05850 SM00861 Transketolase, pyrimidine binding domain TRESU_RS05910 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS05925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRESU_RS05925 SM00331 Sigma factor PP2C-like phosphatases TRESU_RS05940 SM00028 Tetratricopeptide repeats TRESU_RS05950 SM00028 Tetratricopeptide repeats TRESU_RS05955 SM00853 MutL C terminal dimerisation domain TRESU_RS05955 SM01340 TRESU_RS05955 TRESU_RS05990 SM00646 TRESU_RS05990 TRESU_RS06005 SM00028 Tetratricopeptide repeats TRESU_RS06005 SM00954 Region found in RelA / SpoT proteins TRESU_RS06035 SM01126 TRESU_RS06035 TRESU_RS06055 SM00903 Flavin reductase like domain TRESU_RS06105 SM00487 DEAD-like helicases superfamily TRESU_RS06105 SM00490 helicase superfamily c-terminal domain TRESU_RS06110 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06120 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS06190 SM00358 Double-stranded RNA binding motif TRESU_RS06190 SM00535 Ribonuclease III family TRESU_RS06290 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS06295 SM00411 bacterial (prokaryotic) histone like domain TRESU_RS06320 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06325 SM00849 Metallo-beta-lactamase superfamily TRESU_RS06335 SM00400 zinc finger TRESU_RS06335 SM00493 TRESU_RS06335 TRESU_RS06350 SM00028 Tetratricopeptide repeats TRESU_RS06380 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS06385 SM00487 DEAD-like helicases superfamily TRESU_RS06385 SM00490 helicase superfamily c-terminal domain TRESU_RS06385 SM00982 TRESU_RS06385 TRESU_RS06385 SM01058 CarD-like/TRCF domain TRESU_RS06410 SM01005 Alanine racemase, C-terminal domain TRESU_RS06430 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06435 SM00849 Metallo-beta-lactamase superfamily TRESU_RS06500 SM00650 Ribosomal RNA adenine dimethylases TRESU_RS06555 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS06560 SM00271 DnaJ molecular chaperone homology domain TRESU_RS06565 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06565 SM00448 cheY-homologous receiver domain TRESU_RS06570 SM00091 PAS domain TRESU_RS06570 SM00387 Histidine kinase-like ATPases TRESU_RS06570 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS06600 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06605 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06655 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06655 SM00994 ClpX C4-type zinc finger TRESU_RS06655 SM01086 C-terminal, D2-small domain, of ClpB protein TRESU_RS06665 SM00487 DEAD-like helicases superfamily TRESU_RS06665 SM00490 helicase superfamily c-terminal domain TRESU_RS06715 SM00488 TRESU_RS06715 TRESU_RS06715 SM00491 TRESU_RS06715 TRESU_RS06935 SM01126 TRESU_RS06935 TRESU_RS06965 SM00382 ATPases associated with a variety of cellular activities TRESU_RS06975 SM00354 helix_turn _helix lactose operon repressor TRESU_RS06980 SM01068 Putative carbohydrate binding domain TRESU_RS06985 SM00248 ankyrin repeats TRESU_RS07000 SM00028 Tetratricopeptide repeats TRESU_RS07040 SM00642 Alpha-amylase domain TRESU_RS07070 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07080 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS07100 SM00984 UDP binding domain TRESU_RS07195 SM00052 Putative diguanylate phosphodiesterase TRESU_RS07195 SM00267 diguanylate cyclase TRESU_RS07205 SM00357 Cold shock protein domain TRESU_RS07205 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07205 SM00959 Rho termination factor, N-terminal domain TRESU_RS07215 SM00411 bacterial (prokaryotic) histone like domain TRESU_RS07225 SM00563 Phosphate acyltransferases TRESU_RS07405 SM00917 LeuA allosteric (dimerisation) domain TRESU_RS07425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRESU_RS07460 SM00671 Sel1-like repeats. TRESU_RS07485 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS07495 SM00861 Transketolase, pyrimidine binding domain TRESU_RS07580 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07580 SM01086 C-terminal, D2-small domain, of ClpB protein TRESU_RS07595 SM01264 TRESU_RS07595 TRESU_RS07605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS07630 SM00477 DNA/RNA non-specific endonuclease TRESU_RS07630 SM00892 DNA/RNA non-specific endonuclease TRESU_RS07635 SM00854 Bacterial capsule synthesis protein PGA_cap TRESU_RS07640 SM00487 DEAD-like helicases superfamily TRESU_RS07640 SM00490 helicase superfamily c-terminal domain TRESU_RS07640 SM00847 Helicase associated domain (HA2) Add an annotation TRESU_RS07690 SM00363 S4 RNA-binding domain TRESU_RS07730 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07765 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07775 SM00062 Bacterial periplasmic substrate-binding proteins TRESU_RS07780 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS07810 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07820 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS07825 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TRESU_RS07840 SM01245 TRESU_RS07840 TRESU_RS07860 SM00382 ATPases associated with a variety of cellular activities TRESU_RS07860 SM00962 SRP54-type protein, GTPase domain TRESU_RS07930 SM00448 cheY-homologous receiver domain TRESU_RS07930 SM00862 Transcriptional regulatory protein, C terminal TRESU_RS07935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS07935 SM00387 Histidine kinase-like ATPases TRESU_RS07935 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS07945 SM01409 TRESU_RS07945 TRESU_RS07975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS07975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS08060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS08060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS08070 SM00981 TRESU_RS08070 TRESU_RS08090 SM00986 Uracil DNA glycosylase superfamily TRESU_RS08090 SM00987 UreE urease accessory protein, C-terminal domain TRESU_RS08095 SM00487 DEAD-like helicases superfamily TRESU_RS08095 SM00490 helicase superfamily c-terminal domain TRESU_RS08105 SM00957 SecA DEAD-like domain TRESU_RS08105 SM00958 SecA preprotein cross-linking domain TRESU_RS08110 SM00382 ATPases associated with a variety of cellular activities TRESU_RS08110 SM01086 C-terminal, D2-small domain, of ClpB protein TRESU_RS08125 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TRESU_RS08125 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TRESU_RS08125 SM00493 TRESU_RS08125 TRESU_RS08135 SM00028 Tetratricopeptide repeats TRESU_RS08145 SM00864 Tubulin/FtsZ family, GTPase domain TRESU_RS08145 SM00865 Tubulin/FtsZ family, C-terminal domain TRESU_RS08150 SM00842 Cell division protein FtsA TRESU_RS08230 SM00347 helix_turn_helix multiple antibiotic resistance protein TRESU_RS08240 SM00448 cheY-homologous receiver domain TRESU_RS08250 SM00138 Methyltransferase, chemotaxis proteins TRESU_RS08250 SM00260 Two component signalling adaptor domain TRESU_RS08255 SM00073 Histidine Phosphotransfer domain TRESU_RS08255 SM00260 Two component signalling adaptor domain TRESU_RS08255 SM00387 Histidine kinase-like ATPases TRESU_RS08255 SM01231 TRESU_RS08255 TRESU_RS08265 SM00448 cheY-homologous receiver domain TRESU_RS08265 SM00862 Transcriptional regulatory protein, C terminal TRESU_RS08380 SM00487 DEAD-like helicases superfamily TRESU_RS08380 SM00490 helicase superfamily c-terminal domain TRESU_RS08415 SM00487 DEAD-like helicases superfamily TRESU_RS08415 SM00490 helicase superfamily c-terminal domain TRESU_RS08485 SM00028 Tetratricopeptide repeats TRESU_RS08490 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS08490 SM01091 Transporter associated domain TRESU_RS08500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TRESU_RS08525 SM00490 helicase superfamily c-terminal domain TRESU_RS08555 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS08555 SM01091 Transporter associated domain TRESU_RS08605 SM00387 Histidine kinase-like ATPases TRESU_RS08605 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS08610 SM00448 cheY-homologous receiver domain TRESU_RS08610 SM00862 Transcriptional regulatory protein, C terminal TRESU_RS08675 SM01001 AIR carboxylase TRESU_RS08695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS08695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS08695 SM01049 TRESU_RS08695 TRESU_RS08835 SM00487 DEAD-like helicases superfamily TRESU_RS08895 SM00382 ATPases associated with a variety of cellular activities TRESU_RS08945 SM00671 Sel1-like repeats. TRESU_RS08955 SM00635 Bacterial Ig-like domain 2 TRESU_RS09020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TRESU_RS09020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TRESU_RS09020 SM00493 TRESU_RS09020 TRESU_RS09105 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS09130 SM00360 RNA recognition motif TRESU_RS09160 SM00838 Elongation factor G C-terminus TRESU_RS09160 SM00889 Elongation factor G, domain IV TRESU_RS09165 SM00448 cheY-homologous receiver domain TRESU_RS09190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TRESU_RS09190 SM00382 ATPases associated with a variety of cellular activities TRESU_RS09195 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS09200 SM00363 S4 RNA-binding domain TRESU_RS09220 SM00382 ATPases associated with a variety of cellular activities TRESU_RS09270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS09340 SM00260 Two component signalling adaptor domain TRESU_RS09350 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TRESU_RS09350 SM00534 ATPase domain of DNA mismatch repair MUTS family TRESU_RS09355 SM00935 Outer membrane protein (OmpH-like) TRESU_RS09390 SM01018 B12 binding domain TRESU_RS09420 SM00287 Bacterial SH3 domain homologues TRESU_RS09455 SM00955 TRESU_RS09455 TRESU_RS09460 SM00382 ATPases associated with a variety of cellular activities TRESU_RS09470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS09470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS09490 SM00712 DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria. TRESU_RS09510 SM00028 Tetratricopeptide repeats TRESU_RS09540 SM00849 Metallo-beta-lactamase superfamily TRESU_RS09545 SM01133 TRESU_RS09545 TRESU_RS09550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRESU_RS09570 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS09575 SM00028 Tetratricopeptide repeats TRESU_RS09585 SM00487 DEAD-like helicases superfamily TRESU_RS09585 SM00490 helicase superfamily c-terminal domain TRESU_RS09600 SM00838 Elongation factor G C-terminus TRESU_RS09600 SM00889 Elongation factor G, domain IV TRESU_RS09630 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS09630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TRESU_RS09680 SM00871 Bacterial transcription activator, effector binding domain TRESU_RS09735 SM00857 Resolvase, N terminal domain TRESU_RS09785 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS09815 SM00857 Resolvase, N terminal domain TRESU_RS09870 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS09875 SM00889 Elongation factor G, domain IV TRESU_RS09910 SM00861 Transketolase, pyrimidine binding domain TRESU_RS09955 SM00387 Histidine kinase-like ATPases TRESU_RS09965 SM00421 helix_turn_helix, Lux Regulon TRESU_RS10000 SM00421 helix_turn_helix, Lux Regulon TRESU_RS10000 SM00448 cheY-homologous receiver domain TRESU_RS10045 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS10080 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS10175 SM00448 cheY-homologous receiver domain TRESU_RS10220 SM01038 Beta galactosidase small chain TRESU_RS10245 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10280 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10300 SM00052 Putative diguanylate phosphodiesterase TRESU_RS10300 SM00331 Sigma factor PP2C-like phosphatases TRESU_RS10305 SM00448 cheY-homologous receiver domain TRESU_RS10305 SM00862 Transcriptional regulatory protein, C terminal TRESU_RS10310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS10310 SM00387 Histidine kinase-like ATPases TRESU_RS10310 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS10320 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS10325 SM00487 DEAD-like helicases superfamily TRESU_RS10325 SM00490 helicase superfamily c-terminal domain TRESU_RS10380 SM00052 Putative diguanylate phosphodiesterase TRESU_RS10380 SM00267 diguanylate cyclase TRESU_RS10395 SM01126 TRESU_RS10395 TRESU_RS10420 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10425 SM00062 Bacterial periplasmic substrate-binding proteins TRESU_RS10465 SM00470 ParB-like nuclease domain TRESU_RS10490 SM00479 TRESU_RS10490 TRESU_RS10500 SM00257 Lysin motif TRESU_RS10560 SM00841 Elongation factor P, C-terminal TRESU_RS10560 SM01185 TRESU_RS10560 TRESU_RS10580 SM00341 Helicase and RNase D C-terminal TRESU_RS10580 SM00487 DEAD-like helicases superfamily TRESU_RS10580 SM00490 helicase superfamily c-terminal domain TRESU_RS10585 SM00567 E-Z type HEAT repeats TRESU_RS10615 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS10615 SM00322 K homology RNA-binding domain TRESU_RS10620 SM01387 TRESU_RS10620 TRESU_RS10640 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS10655 SM01118 TRESU_RS10655 TRESU_RS10705 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10765 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10765 SM01086 C-terminal, D2-small domain, of ClpB protein TRESU_RS10785 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10800 SM00382 ATPases associated with a variety of cellular activities TRESU_RS10800 SM00962 SRP54-type protein, GTPase domain TRESU_RS10810 SM00937 TRESU_RS10810 TRESU_RS10870 SM00345 helix_turn_helix gluconate operon transcriptional repressor TRESU_RS10880 SM00954 Region found in RelA / SpoT proteins TRESU_RS10915 SM00857 Resolvase, N terminal domain TRESU_RS10930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS10930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TRESU_RS10935 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS10935 SM01240 TRESU_RS10935 TRESU_RS10940 SM00788 Adenylosuccinate synthetase TRESU_RS10960 SM01400 TRESU_RS10960 TRESU_RS11045 SM00382 ATPases associated with a variety of cellular activities TRESU_RS11180 SM00354 helix_turn _helix lactose operon repressor TRESU_RS11190 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TRESU_RS11225 SM00448 cheY-homologous receiver domain TRESU_RS11230 SM00138 Methyltransferase, chemotaxis proteins TRESU_RS11235 SM00257 Lysin motif TRESU_RS11255 SM00422 helix_turn_helix, mercury resistance TRESU_RS11290 SM00938 Nitrogen regulatory protein P-II TRESU_RS11315 SM01058 CarD-like/TRCF domain TRESU_RS11375 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS11395 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS11455 SM00387 Histidine kinase-like ATPases TRESU_RS11460 SM00448 cheY-homologous receiver domain TRESU_RS11465 SM00421 helix_turn_helix, Lux Regulon TRESU_RS11550 SM00487 DEAD-like helicases superfamily TRESU_RS11550 SM00490 helicase superfamily c-terminal domain TRESU_RS11585 SM00363 S4 RNA-binding domain TRESU_RS11585 SM01390 TRESU_RS11585 TRESU_RS11595 SM00028 Tetratricopeptide repeats TRESU_RS11610 SM00100 Cyclic nucleotide-monophosphate binding domain TRESU_RS11635 SM00460 Transglutaminase/protease-like homologues TRESU_RS11650 SM01209 TRESU_RS11650 TRESU_RS11650 SM01210 TRESU_RS11650 TRESU_RS11685 SM00244 prohibitin homologues TRESU_RS11690 SM00244 prohibitin homologues TRESU_RS11760 SM00267 diguanylate cyclase TRESU_RS11790 SM00382 ATPases associated with a variety of cellular activities TRESU_RS11865 SM00849 Metallo-beta-lactamase superfamily TRESU_RS11865 SM01027 Beta-Casp domain TRESU_RS11885 SM00382 ATPases associated with a variety of cellular activities TRESU_RS11895 SM01192 TRESU_RS11895 TRESU_RS11895 SM01193 TRESU_RS11895 TRESU_RS11920 SM00382 ATPases associated with a variety of cellular activities TRESU_RS11950 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TRESU_RS11950 SM01080 TRESU_RS11950 TRESU_RS11965 SM01007 Class II Aldolase and Adducin N-terminal domain TRESU_RS11980 SM00382 ATPases associated with a variety of cellular activities TRESU_RS11995 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS12010 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS12045 SM00563 Phosphate acyltransferases TRESU_RS12115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TRESU_RS12115 SM00478 endonuclease III TRESU_RS12115 SM00525 TRESU_RS12115 TRESU_RS12150 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12175 SM00028 Tetratricopeptide repeats TRESU_RS12195 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12240 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS12275 SM00257 Lysin motif TRESU_RS12285 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS12315 SM00028 Tetratricopeptide repeats TRESU_RS12340 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS12350 SM00481 DNA polymerase alpha chain like domain TRESU_RS12355 SM00448 cheY-homologous receiver domain TRESU_RS12365 SM00421 helix_turn_helix, Lux Regulon TRESU_RS12385 SM00116 Domain in cystathionine beta-synthase and other proteins. TRESU_RS12390 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12395 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12425 SM00662 RNA polymerases D TRESU_RS12480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TRESU_RS12485 SM01374 TRESU_RS12485 TRESU_RS12505 SM00322 K homology RNA-binding domain TRESU_RS12520 SM01382 TRESU_RS12520 TRESU_RS12520 SM01383 TRESU_RS12520 TRESU_RS12540 SM01403 TRESU_RS12540 TRESU_RS12560 SM00663 RNA polymerase I subunit A N-terminus TRESU_RS12585 SM00649 Ribosomal protein L11/L12 TRESU_RS12590 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TRESU_RS12590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TRESU_RS12680 SM00798 AICARFT/IMPCHase bienzyme TRESU_RS12695 SM00052 Putative diguanylate phosphodiesterase TRESU_RS12695 SM00267 diguanylate cyclase TRESU_RS12700 SM00729 Elongator protein 3, MiaB family, Radical SAM TRESU_RS12740 SM00354 helix_turn _helix lactose operon repressor TRESU_RS12780 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12805 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12805 SM00930 TRESU_RS12805 TRESU_RS12820 SM00900 TRESU_RS12820 TRESU_RS12835 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TRESU_RS12890 SM00382 ATPases associated with a variety of cellular activities TRESU_RS12890 SM00843 TRESU_RS12890 TRESU_RS12895 SM00636 TRESU_RS12895 TRESU_RS12910 SM00028 Tetratricopeptide repeats TRESU_RS12920 SM00344 helix_turn_helix ASNC type TRESU_RS12950 SM00487 DEAD-like helicases superfamily TRESU_RS12950 SM00490 helicase superfamily c-terminal domain TRESU_RS13020 SM00342 helix_turn_helix, arabinose operon control protein TRESU_RS13045 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS13060 SM00316 Ribosomal protein S1-like RNA-binding domain TRESU_RS13080 SM00434 DNA Topoisomerase IV TRESU_RS13085 SM00387 Histidine kinase-like ATPases TRESU_RS13085 SM00433 TopoisomeraseII TRESU_RS13110 SM00760 Bacterial dnaA protein helix-turn-helix domain TRESU_RS13470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TRESU_RS13920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS13930 SM00382 ATPases associated with a variety of cellular activities TRESU_RS13955 SM00421 helix_turn_helix, Lux Regulon TRESU_RS13955 SM00448 cheY-homologous receiver domain TRESU_RS13960 SM00535 Ribonuclease III family TRESU_RS13995 SM00014 Acid phosphatase homologues TRESU_RS14000 SM00909 Sporulation and spore germination TRESU_RS14005 SM00257 Lysin motif TRESU_RS14020 SM00028 Tetratricopeptide repeats TRESU_RS14035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS14055 SM00331 Sigma factor PP2C-like phosphatases TRESU_RS14135 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS14150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS14160 SM00387 Histidine kinase-like ATPases TRESU_RS14160 SM00388 His Kinase A (phosphoacceptor) domain TRESU_RS14160 SM00448 cheY-homologous receiver domain TRESU_RS14165 SM00448 cheY-homologous receiver domain TRESU_RS14205 SM00028 Tetratricopeptide repeats TRESU_RS14230 SM00248 ankyrin repeats TRESU_RS14240 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS14255 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TRESU_RS14300 SM00248 ankyrin repeats TRESU_RS14320 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain TRESU_RS14320 SM01080 TRESU_RS14320 TRESU_RS14370 SM00267 diguanylate cyclase TRESU_RS14375 SM00530 Helix-turn-helix XRE-family like proteins TRESU_RS14400 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TRESU_RS14440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.