TW_RS00005	SM00382	ATPases associated with a variety of cellular activities
TW_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
TW_RS00010	SM00480	DNA polymerase III beta subunit
TW_RS00025	SM00387	Histidine kinase-like ATPases
TW_RS00025	SM00433	TopoisomeraseII
TW_RS00030	SM00434	DNA Topoisomerase IV
TW_RS00050	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
TW_RS00110	SM00878	Biotin carboxylase C-terminal domain
TW_RS00150	SM01001	AIR carboxylase
TW_RS00185	SM00382	ATPases associated with a variety of cellular activities
TW_RS00250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
TW_RS00250	SM00387	Histidine kinase-like ATPases
TW_RS00250	SM00388	His Kinase A (phosphoacceptor) domain
TW_RS00255	SM00448	cheY-homologous receiver domain
TW_RS00255	SM00862	Transcriptional regulatory protein, C terminal
TW_RS00260	SM00357	Cold shock protein domain
TW_RS00315	SM00382	ATPases associated with a variety of cellular activities
TW_RS00340	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
TW_RS00365	SM00155	Phospholipase D. Active site motifs.
TW_RS00370	SM00382	ATPases associated with a variety of cellular activities
TW_RS00370	SM01086	C-terminal, D2-small domain, of ClpB protein
TW_RS00410	SM00663	RNA polymerase I subunit A N-terminus
TW_RS00420	SM00883	Chaperonin 10 Kd subunit
TW_RS00425	SM00116	Domain in cystathionine beta-synthase and other proteins.
TW_RS00425	SM01240	TW_RS00425
TW_RS00430	SM01240	TW_RS00430
TW_RS00470	SM00798	AICARFT/IMPCHase bienzyme
TW_RS00470	SM00851	MGS-like domain
TW_RS00490	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TW_RS00500	SM00331	Sigma factor PP2C-like phosphatases
TW_RS00500	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
TW_RS00595	SM00382	ATPases associated with a variety of cellular activities
TW_RS00650	SM00529	Helix-turn-helix diphteria tox regulatory element
TW_RS00670	SM00411	bacterial (prokaryotic) histone like domain
TW_RS00680	SM00487	DEAD-like helicases superfamily
TW_RS00680	SM00490	helicase superfamily c-terminal domain
TW_RS00730	SM00957	SecA DEAD-like domain
TW_RS00730	SM00958	SecA preprotein cross-linking domain
TW_RS00775	SM00382	ATPases associated with a variety of cellular activities
TW_RS00790	SM00382	ATPases associated with a variety of cellular activities
TW_RS00925	SM00382	ATPases associated with a variety of cellular activities
TW_RS00930	SM00382	ATPases associated with a variety of cellular activities
TW_RS00980	SM00382	ATPases associated with a variety of cellular activities
TW_RS00990	SM00905	Dihydroneopterin aldolase
TW_RS01000	SM00382	ATPases associated with a variety of cellular activities
TW_RS01010	SM00986	Uracil DNA glycosylase superfamily
TW_RS01010	SM00987	UreE urease accessory protein, C-terminal domain 
TW_RS01015	SM00904	Riboflavin kinase
TW_RS01080	SM00487	DEAD-like helicases superfamily
TW_RS01080	SM00490	helicase superfamily c-terminal domain
TW_RS01100	SM00358	Double-stranded RNA binding motif
TW_RS01100	SM00535	Ribonuclease III family
TW_RS01120	SM00382	ATPases associated with a variety of cellular activities
TW_RS01125	SM00382	ATPases associated with a variety of cellular activities
TW_RS01130	SM00382	ATPases associated with a variety of cellular activities
TW_RS01130	SM00962	SRP54-type protein, GTPase domain
TW_RS01135	SM01403	TW_RS01135
TW_RS01155	SM01382	TW_RS01155
TW_RS01155	SM01383	TW_RS01155
TW_RS01170	SM00322	K homology RNA-binding domain
TW_RS01190	SM01374	TW_RS01190
TW_RS01265	SM00662	RNA polymerases D
TW_RS01290	SM00116	Domain in cystathionine beta-synthase and other proteins.
TW_RS01290	SM00924	MgtE intracellular N domain
TW_RS01295	SM01011	Aminopeptidase P, N-terminal domain
TW_RS01310	SM00382	ATPases associated with a variety of cellular activities
TW_RS01335	SM00864	Tubulin/FtsZ family, GTPase domain
TW_RS01335	SM00865	Tubulin/FtsZ family, C-terminal domain
TW_RS01360	SM00481	DNA polymerase alpha chain like domain
TW_RS01380	SM00563	Phosphate acyltransferases
TW_RS01435	SM01005	Alanine racemase, C-terminal domain
TW_RS01440	SM01005	Alanine racemase, C-terminal domain
TW_RS01445	SM00387	Histidine kinase-like ATPases
TW_RS01445	SM00433	TopoisomeraseII
TW_RS01460	SM01350	TW_RS01460
TW_RS01465	SM00434	DNA Topoisomerase IV
TW_RS01500	SM00861	Transketolase, pyrimidine binding domain
TW_RS01535	SM00382	ATPases associated with a variety of cellular activities
TW_RS01535	SM00994	ClpX C4-type zinc finger
TW_RS01535	SM01086	C-terminal, D2-small domain, of ClpB protein
TW_RS01560	SM00562	TW_RS01560
TW_RS01620	SM00729	Elongator protein 3, MiaB family, Radical SAM
TW_RS01630	SM00382	ATPases associated with a variety of cellular activities
TW_RS01630	SM00962	SRP54-type protein, GTPase domain
TW_RS01630	SM00963	SRP54-type protein, helical bundle domain
TW_RS01675	SM00382	ATPases associated with a variety of cellular activities
TW_RS01770	SM00959	Rho termination factor, N-terminal domain
TW_RS01775	SM00937	TW_RS01775
TW_RS01830	SM00382	ATPases associated with a variety of cellular activities
TW_RS01840	SM01387	TW_RS01840
TW_RS01845	SM00316	Ribosomal protein S1-like RNA-binding domain
TW_RS01845	SM00322	K homology RNA-binding domain
TW_RS01880	SM00532	Ligase N family
TW_RS01895	SM00845	GatB domain
TW_RS01910	SM00382	ATPases associated with a variety of cellular activities
TW_RS01930	SM00479	TW_RS01930
TW_RS01960	SM00382	ATPases associated with a variety of cellular activities
TW_RS01985	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
TW_RS01985	SM01232	TW_RS01985
TW_RS01995	SM00341	Helicase and RNase D C-terminal
TW_RS01995	SM00474	3'-5' exonuclease
TW_RS02015	SM00450	Rhodanese Homology Domain
TW_RS02065	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TW_RS02095	SM00363	S4 RNA-binding domain
TW_RS02095	SM01390	TW_RS02095
TW_RS02105	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TW_RS02110	SM00732	Likely ribonuclease with RNase H fold.
TW_RS02145	SM00841	Elongation factor P, C-terminal
TW_RS02145	SM01185	TW_RS02145
TW_RS02155	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
TW_RS02160	SM00851	MGS-like domain
TW_RS02160	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
TW_RS02165	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TW_RS02175	SM01409	TW_RS02175
TW_RS02225	SM00382	ATPases associated with a variety of cellular activities
TW_RS02235	SM00836	DALR anticodon binding domain
TW_RS02235	SM01016	Arginyl tRNA synthetase N terminal dom
TW_RS02245	SM01058	CarD-like/TRCF domain
TW_RS02260	SM00967	RNA 2'-O ribose methyltransferase substrate binding
TW_RS02300	SM00861	Transketolase, pyrimidine binding domain
TW_RS02355	SM00382	ATPases associated with a variety of cellular activities
TW_RS02445	SM00822	TW_RS02445
TW_RS02505	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
TW_RS02520	SM00465	GIY-YIG type nucleases (URI domain)
TW_RS02530	SM00487	DEAD-like helicases superfamily
TW_RS02530	SM00490	helicase superfamily c-terminal domain
TW_RS02540	SM00316	Ribosomal protein S1-like RNA-binding domain
TW_RS02545	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
TW_RS02545	SM00475	5'-3' exonuclease
TW_RS02550	SM00448	cheY-homologous receiver domain
TW_RS02550	SM01012	TW_RS02550
TW_RS02580	SM00400	zinc finger
TW_RS02580	SM00493	TW_RS02580
TW_RS02585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TW_RS02620	SM00271	DnaJ molecular chaperone homology domain
TW_RS02630	SM00838	Elongation factor G C-terminus
TW_RS02640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TW_RS02640	SM00954	Region found in RelA / SpoT proteins
TW_RS02660	SM01323	TW_RS02660
TW_RS02665	SM00382	ATPases associated with a variety of cellular activities
TW_RS02670	SM00278	Helix-hairpin-helix DNA-binding motif class 1
TW_RS02700	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
TW_RS02705	SM01230	TW_RS02705
TW_RS02745	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
TW_RS02760	SM00825	Beta-ketoacyl synthase
TW_RS02835	SM00422	helix_turn_helix, mercury resistance
TW_RS02840	SM00422	helix_turn_helix, mercury resistance
TW_RS02845	SM00240	Forkhead associated domain
TW_RS02940	SM00220	Serine/Threonine protein kinases, catalytic domain
TW_RS02940	SM00740	TW_RS02940
TW_RS02950	SM00563	Phosphate acyltransferases
TW_RS03050	SM00650	Ribosomal RNA adenine dimethylases
TW_RS03070	SM00382	ATPases associated with a variety of cellular activities
TW_RS03075	SM00937	TW_RS03075
TW_RS03200	SM01400	TW_RS03200
TW_RS03220	SM00487	DEAD-like helicases superfamily
TW_RS03220	SM00490	helicase superfamily c-terminal domain
TW_RS03220	SM00982	TW_RS03220
TW_RS03220	SM01058	CarD-like/TRCF domain
TW_RS03235	SM00382	ATPases associated with a variety of cellular activities
TW_RS03245	SM00382	ATPases associated with a variety of cellular activities
TW_RS03300	SM00873	B3/4 domain
TW_RS03300	SM00874	tRNA synthetase B5 domain
TW_RS03300	SM00896	Ferredoxin-fold anticodon binding domain
TW_RS03415	SM00729	Elongator protein 3, MiaB family, Radical SAM
TW_RS03420	SM00382	ATPases associated with a variety of cellular activities
TW_RS03435	SM00382	ATPases associated with a variety of cellular activities
TW_RS03435	SM00843	TW_RS03435
TW_RS03440	SM00849	Metallo-beta-lactamase superfamily
TW_RS03515	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
TW_RS03540	SM00878	Biotin carboxylase C-terminal domain
TW_RS03555	SM00387	Histidine kinase-like ATPases
TW_RS03630	SM01007	Class II Aldolase and Adducin N-terminal domain
TW_RS03640	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
TW_RS03670	SM00855	Phosphoglycerate mutase family
TW_RS03680	SM00756	TW_RS03680
TW_RS03690	SM00855	Phosphoglycerate mutase family
TW_RS03710	SM00382	ATPases associated with a variety of cellular activities
TW_RS03755	SM00838	Elongation factor G C-terminus
TW_RS03755	SM00889	Elongation factor G, domain IV
TW_RS03865	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
TW_RS03865	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
TW_RS03865	SM00493	TW_RS03865
TW_RS03900	SM00740	TW_RS03900
TW_RS03915	SM00859	Semialdehyde dehydrogenase, NAD binding domain
TW_RS03925	SM00493	TW_RS03925
TW_RS03930	SM00382	ATPases associated with a variety of cellular activities
TW_RS03950	SM00649	Ribosomal protein L11/L12
TW_RS03955	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
TW_RS03955	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
TW_RS04005	SM01209	TW_RS04005
TW_RS04005	SM01210	TW_RS04005
TW_RS04040	SM01004	Delta-aminolevulinic acid dehydratase
TW_RS04075	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
TW_RS04080	SM00382	ATPases associated with a variety of cellular activities
TW_RS04120	SM00382	ATPases associated with a variety of cellular activities
TW_RS04120	SM01086	C-terminal, D2-small domain, of ClpB protein
TW_RS04125	SM00422	helix_turn_helix, mercury resistance
TW_RS04130	SM00271	DnaJ molecular chaperone homology domain
TW_RS04165	SM00855	Phosphoglycerate mutase family
TW_RS04260	SM00240	Forkhead associated domain
TW_RS04275	SM00220	Serine/Threonine protein kinases, catalytic domain
TW_RS04280	SM00220	Serine/Threonine protein kinases, catalytic domain
TW_RS04280	SM00740	TW_RS04280
TW_RS04305	SM01192	TW_RS04305
TW_RS04305	SM01193	TW_RS04305
TW_RS04340	SM00861	Transketolase, pyrimidine binding domain
TW_RS04355	SM00788	Adenylosuccinate synthetase
TW_RS04360	SM00830	Chorismate mutase type II
TW_RS04370	SM01211	TW_RS04370
TW_RS04395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
TW_RS04400	SM00470	ParB-like nuclease domain
TW_RS04415	SM00393	Putative single-stranded nucleic acids-binding domain
TW_RS04425	SM01234	TW_RS04425
TW_RS04460	SM00072	Guanylate kinase homologues.
