locus-tag class description M1F28_RS00005 PF00308 Bacterial dnaA protein M1F28_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix M1F28_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M1F28_RS00010 PF02767 DNA polymerase III beta subunit, central domain M1F28_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M1F28_RS00015 PF02463 RecF/RecN/SMC N terminal domain M1F28_RS00025 PF00204 DNA gyrase B M1F28_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus M1F28_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS00025 PF01751 Toprim domain M1F28_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A M1F28_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller M1F28_RS00035 PF12089 Transmembrane domain of unknown function (DUF3566) M1F28_RS00070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M1F28_RS00075 PF01694 Rhomboid family M1F28_RS00080 PF06781 Cell division protein CrgA M1F28_RS00085 PF04203 Sortase domain M1F28_RS00095 PF03793 PASTA domain M1F28_RS00095 PF00069 Protein kinase domain M1F28_RS00100 PF00905 Penicillin binding protein transpeptidase domain M1F28_RS00105 PF01098 Cell cycle protein M1F28_RS00115 PF16697 Inner membrane component of T3SS, cytoplasmic domain M1F28_RS00120 PF00005 ABC transporter M1F28_RS00120 PF00498 FHA domain M1F28_RS00120 PF01061 ABC-2 type transporter M1F28_RS00130 PF00326 Prolyl oligopeptidase family M1F28_RS00130 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M1F28_RS00140 PF00075 RNase H M1F28_RS00145 PF01661 Macro domain M1F28_RS00150 PF01048 Phosphorylase superfamily M1F28_RS00155 PF02664 S-Ribosylhomocysteinase (LuxS) M1F28_RS00160 PF01475 Ferric uptake regulator family M1F28_RS00170 PF07972 NrdI Flavodoxin like M1F28_RS00175 PF08343 Ribonucleotide reductase N-terminal M1F28_RS00175 PF00317 Ribonucleotide reductase, all-alpha domain M1F28_RS00175 PF02867 Ribonucleotide reductase, barrel domain M1F28_RS00180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M1F28_RS00180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M1F28_RS00190 PF00268 Ribonucleotide reductase, small chain M1F28_RS00195 PF01451 Low molecular weight phosphotyrosine protein phosphatase M1F28_RS00210 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00235 PF00743 Flavin-binding monooxygenase-like M1F28_RS00245 PF04408 Helicase associated domain (HA2) M1F28_RS00245 PF11898 Domain of unknown function (DUF3418) M1F28_RS00245 PF00271 Helicase conserved C-terminal domain M1F28_RS00245 PF00270 DEAD/DEAH box helicase M1F28_RS00245 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M1F28_RS00250 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS00250 PF00072 Response regulator receiver domain M1F28_RS00255 PF07730 Histidine kinase M1F28_RS00265 PF00005 ABC transporter M1F28_RS00275 PF00005 ABC transporter M1F28_RS00285 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS00285 PF00072 Response regulator receiver domain M1F28_RS00290 PF01263 Aldose 1-epimerase M1F28_RS00295 PF03477 ATP cone domain M1F28_RS00295 PF13597 Anaerobic ribonucleoside-triphosphate reductase M1F28_RS00305 PF01757 Acyltransferase family M1F28_RS00315 PF12704 MacB-like periplasmic core domain M1F28_RS00315 PF02687 FtsX-like permease family M1F28_RS00315 PF00005 ABC transporter M1F28_RS00320 PF09339 IclR helix-turn-helix domain M1F28_RS00320 PF01614 Bacterial transcriptional regulator M1F28_RS00325 PF01232 Mannitol dehydrogenase Rossmann domain M1F28_RS00325 PF08125 Mannitol dehydrogenase C-terminal domain M1F28_RS00330 PF03786 D-mannonate dehydratase (UxuA) M1F28_RS00335 PF01081 KDPG and KHG aldolase M1F28_RS00340 PF00294 pfkB family carbohydrate kinase M1F28_RS00345 PF13649 Methyltransferase domain M1F28_RS00355 PF00005 ABC transporter M1F28_RS00365 PF01032 FecCD transport family M1F28_RS00380 PF00664 ABC transporter transmembrane region M1F28_RS00380 PF00005 ABC transporter M1F28_RS00385 PF00664 ABC transporter transmembrane region M1F28_RS00385 PF00005 ABC transporter M1F28_RS00390 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS00405 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00425 PF12008 Type I restriction and modification enzyme - subunit R C terminal M1F28_RS00425 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M1F28_RS00425 PF18766 SWI2/SNF2 ATPase M1F28_RS00440 PF01420 Type I restriction modification DNA specificity domain M1F28_RS00445 PF02384 N-6 DNA Methylase M1F28_RS00445 PF12161 HsdM N-terminal domain M1F28_RS00450 PF08544 GHMP kinases C terminal M1F28_RS00450 PF10509 Galactokinase galactose-binding signature M1F28_RS00450 PF00288 GHMP kinases N terminal domain M1F28_RS00475 PF00005 ABC transporter M1F28_RS00480 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS00485 PF13407 Periplasmic binding protein domain M1F28_RS00490 PF00294 pfkB family carbohydrate kinase M1F28_RS00490 PF01467 Cytidylyltransferase-like M1F28_RS00495 PF11975 Family 4 glycosyl hydrolase C-terminal domain M1F28_RS00495 PF02056 Family 4 glycosyl hydrolase M1F28_RS00525 PF02403 Seryl-tRNA synthetase N-terminal domain M1F28_RS00525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_RS00540 PF00800 Prephenate dehydratase M1F28_RS00570 PF14437 MafB19-like deaminase M1F28_RS00580 PF05525 Branched-chain amino acid transport protein M1F28_RS00585 PF08903 Domain of unknown function (DUF1846) M1F28_RS00600 PF00581 Rhodanese-like domain M1F28_RS00600 PF00899 ThiF family M1F28_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00640 PF00994 Probable molybdopterin binding domain M1F28_RS00645 PF03453 MoeA N-terminal region (domain I and II) M1F28_RS00645 PF00994 Probable molybdopterin binding domain M1F28_RS00645 PF03454 MoeA C-terminal region (domain IV) M1F28_RS00650 PF01967 MoaC family M1F28_RS00655 PF02391 MoaE protein M1F28_RS00660 PF04055 Radical SAM superfamily M1F28_RS00660 PF06463 Molybdenum Cofactor Synthesis C M1F28_RS00670 PF00128 Alpha amylase, catalytic domain M1F28_RS00670 PF02903 Alpha amylase, N-terminal ig-like domain M1F28_RS00685 PF00912 Transglycosylase M1F28_RS00685 PF00905 Penicillin binding protein transpeptidase domain M1F28_RS00690 PF02467 Transcription factor WhiB M1F28_RS00710 PF13545 Crp-like helix-turn-helix domain M1F28_RS00710 PF00027 Cyclic nucleotide-binding domain M1F28_RS00715 PF10576 Iron-sulfur binding domain of endonuclease III M1F28_RS00715 PF00730 HhH-GPD superfamily base excision DNA repair protein M1F28_RS00715 PF00633 Helix-hairpin-helix motif M1F28_RS00720 PF00561 alpha/beta hydrolase fold M1F28_RS00735 PF00437 Type II/IV secretion system protein M1F28_RS00765 PF00270 DEAD/DEAH box helicase M1F28_RS00765 PF00271 Helicase conserved C-terminal domain M1F28_RS00770 PF13443 Cro/C1-type HTH DNA-binding domain M1F28_RS00780 PF05175 Methyltransferase small domain M1F28_RS00780 PF17827 PrmC N-terminal domain M1F28_RS00780 PF02390 Putative methyltransferase M1F28_RS00785 PF01131 DNA topoisomerase M1F28_RS00785 PF01751 Toprim domain M1F28_RS00785 PF13368 Topoisomerase C-terminal repeat M1F28_RS00790 PF02223 Thymidylate kinase M1F28_RS00795 PF12169 DNA polymerase III subunits gamma and tau domain III M1F28_RS00800 PF00561 alpha/beta hydrolase fold M1F28_RS00830 PF00665 Integrase core domain M1F28_RS00830 PF13333 Integrase core domain M1F28_RS00830 PF13276 HTH-like domain M1F28_RS00850 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) M1F28_RS00855 PF13244 Domain of unknown function (DUF4040) M1F28_RS00855 PF00361 Proton-conducting membrane transporter M1F28_RS00855 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M1F28_RS00855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1F28_RS00860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1F28_RS00865 PF00361 Proton-conducting membrane transporter M1F28_RS00895 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS00900 PF00005 ABC transporter M1F28_RS00900 PF08402 TOBE domain M1F28_RS00910 PF07690 Major Facilitator Superfamily M1F28_RS00915 PF07883 Cupin domain M1F28_RS00960 PF00480 ROK family M1F28_RS00965 PF03649 Uncharacterised protein family (UPF0014) M1F28_RS00975 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain M1F28_RS00975 PF00326 Prolyl oligopeptidase family M1F28_RS00985 PF12800 4Fe-4S binding domain M1F28_RS00985 PF13247 4Fe-4S dicluster domain M1F28_RS00990 PF00384 Molybdopterin oxidoreductase M1F28_RS00990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M1F28_RS00990 PF01568 Molydopterin dinucleotide binding domain M1F28_RS00995 PF02583 Metal-sensitive transcriptional repressor M1F28_RS01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS01000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_RS01010 PF00156 Phosphoribosyl transferase domain M1F28_RS01015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1F28_RS01015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1F28_RS01020 PF01979 Amidohydrolase family M1F28_RS01025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M1F28_RS01030 PF00156 Phosphoribosyl transferase domain M1F28_RS01035 PF01180 Dihydroorotate dehydrogenase M1F28_RS01040 PF00012 Hsp70 protein M1F28_RS01045 PF01025 GrpE M1F28_RS01050 PF00684 DnaJ central domain M1F28_RS01050 PF00226 DnaJ domain M1F28_RS01050 PF01556 DnaJ C terminal domain M1F28_RS01060 PF00293 NUDIX domain M1F28_RS01075 PF03009 Glycerophosphoryl diester phosphodiesterase family M1F28_RS01080 PF00326 Prolyl oligopeptidase family M1F28_RS01080 PF07676 WD40-like Beta Propeller Repeat M1F28_RS01080 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region M1F28_RS01090 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1F28_RS01100 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_RS01100 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_RS01100 PF17871 AAA lid domain M1F28_RS01100 PF07724 AAA domain (Cdc48 subfamily) M1F28_RS01100 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS01135 PF00293 NUDIX domain M1F28_RS01145 PF01384 Phosphate transporter family M1F28_RS01150 PF01116 Fructose-bisphosphate aldolase class-II M1F28_RS01160 PF00709 Adenylosuccinate synthetase M1F28_RS01165 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1F28_RS01165 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1F28_RS01170 PF01259 SAICAR synthetase M1F28_RS01175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M1F28_RS01175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M1F28_RS01205 PF02028 BCCT, betaine/carnitine/choline family transporter M1F28_RS01215 PF05738 Cna protein B-type domain M1F28_RS01215 PF05737 Collagen binding domain M1F28_RS01215 PF17802 Prealbumin-like fold domain M1F28_RS01235 PF00056 lactate/malate dehydrogenase, NAD binding domain M1F28_RS01235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1F28_RS01240 PF03023 Lipid II flippase MurJ M1F28_RS01265 PF01641 SelR domain M1F28_RS01290 PF13090 Polyphosphate kinase C-terminal domain 2 M1F28_RS01290 PF02503 Polyphosphate kinase middle domain M1F28_RS01290 PF13089 Polyphosphate kinase N-terminal domain M1F28_RS01290 PF17941 Polyphosphate kinase C-terminal domain 1 M1F28_RS01295 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_RS01295 PF00293 NUDIX domain M1F28_RS01300 PF12849 PBP superfamily domain M1F28_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01315 PF00005 ABC transporter M1F28_RS01320 PF01384 Phosphate transporter family M1F28_RS01330 PF01235 Sodium:alanine symporter family M1F28_RS01340 PF00149 Calcineurin-like phosphoesterase M1F28_RS01340 PF02872 5'-nucleotidase, C-terminal domain M1F28_RS01355 PF08768 Domain of unknown function (DUF1794) M1F28_RS01360 PF01571 Aminomethyltransferase folate-binding domain M1F28_RS01370 PF02580 D-Tyr-tRNA(Tyr) deacylase M1F28_RS01375 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS01375 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_RS01375 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_RS01375 PF17871 AAA lid domain M1F28_RS01375 PF07724 AAA domain (Cdc48 subfamily) M1F28_RS01380 PF00294 pfkB family carbohydrate kinase M1F28_RS01390 PF07690 Major Facilitator Superfamily M1F28_RS01395 PF04198 Putative sugar-binding domain M1F28_RS01410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS01410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS01415 PF05573 NosL M1F28_RS01415 PF08220 DeoR-like helix-turn-helix domain M1F28_RS01425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS01425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS01430 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_RS01435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS01435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS01440 PF02734 DAK2 domain M1F28_RS01440 PF02733 Dak1 domain M1F28_RS01445 PF00107 Zinc-binding dehydrogenase M1F28_RS01445 PF08240 Alcohol dehydrogenase GroES-like domain M1F28_RS01450 PF02502 Ribose/Galactose Isomerase M1F28_RS01455 PF01925 Sulfite exporter TauE/SafE M1F28_RS01460 PF13186 Iron-sulfur cluster-binding domain M1F28_RS01460 PF04055 Radical SAM superfamily M1F28_RS01465 PF00083 Sugar (and other) transporter M1F28_RS01470 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS01475 PF00884 Sulfatase M1F28_RS01490 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01495 PF00005 ABC transporter M1F28_RS01495 PF08402 TOBE domain M1F28_RS01500 PF00480 ROK family M1F28_RS01505 PF01261 Xylose isomerase-like TIM barrel M1F28_RS01510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS01510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS01515 PF13416 Bacterial extracellular solute-binding protein M1F28_RS01520 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01530 PF00884 Sulfatase M1F28_RS01530 PF16347 Domain of unknown function (DUF4976) M1F28_RS01540 PF04198 Putative sugar-binding domain M1F28_RS01540 PF00325 Bacterial regulatory proteins, crp family M1F28_RS01550 PF02447 GntP family permease M1F28_RS01560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1F28_RS01560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M1F28_RS01570 PF07691 PA14 domain M1F28_RS01570 PF00728 Glycosyl hydrolase family 20, catalytic domain M1F28_RS01570 PF02838 Glycosyl hydrolase family 20, domain 2 M1F28_RS01575 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_RS01575 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_RS01575 PF00703 Glycosyl hydrolases family 2 M1F28_RS01575 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M1F28_RS01575 PF16355 Domain of unknown function (DUF4982) M1F28_RS01580 PF05025 RbsD / FucU transport protein family M1F28_RS01585 PF00294 pfkB family carbohydrate kinase M1F28_RS01585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M1F28_RS01590 PF13407 Periplasmic binding protein domain M1F28_RS01595 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS01600 PF00005 ABC transporter M1F28_RS01605 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS01610 PF13649 Methyltransferase domain M1F28_RS01615 PF00005 ABC transporter M1F28_RS01635 PF00149 Calcineurin-like phosphoesterase M1F28_RS01635 PF02872 5'-nucleotidase, C-terminal domain M1F28_RS01645 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS01650 PF00083 Sugar (and other) transporter M1F28_RS01655 PF02308 MgtC family M1F28_RS01670 PF01545 Cation efflux family M1F28_RS01680 PF12728 Helix-turn-helix domain M1F28_RS01680 PF02661 Fic/DOC family M1F28_RS01685 PF18395 Cas3 C-terminal domain M1F28_RS01685 PF00270 DEAD/DEAH box helicase M1F28_RS01685 PF18019 HD domain M1F28_RS01715 PF01867 CRISPR associated protein Cas1 M1F28_RS01725 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH M1F28_RS01735 PF01381 Helix-turn-helix M1F28_RS01740 PF00128 Alpha amylase, catalytic domain M1F28_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01750 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01765 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M1F28_RS01765 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_RS01765 PF00391 PEP-utilising enzyme, mobile domain M1F28_RS01770 PF13183 4Fe-4S dicluster domain M1F28_RS01770 PF02913 FAD linked oxidases, C-terminal domain M1F28_RS01770 PF01565 FAD binding domain M1F28_RS01780 PF12146 Serine aminopeptidase, S33 M1F28_RS01785 PF00561 alpha/beta hydrolase fold M1F28_RS01790 PF00877 NlpC/P60 family M1F28_RS01795 PF00719 Inorganic pyrophosphatase M1F28_RS01800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M1F28_RS01810 PF01171 PP-loop family M1F28_RS01810 PF09179 TilS substrate binding domain M1F28_RS01815 PF00156 Phosphoribosyl transferase domain M1F28_RS01820 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS01820 PF17862 AAA+ lid domain M1F28_RS01820 PF01434 Peptidase family M41 M1F28_RS01825 PF01227 GTP cyclohydrolase I M1F28_RS01830 PF00809 Pterin binding enzyme M1F28_RS01835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M1F28_RS01855 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS01860 PF13416 Bacterial extracellular solute-binding protein M1F28_RS01865 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01870 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS01875 PF02929 Beta galactosidase small chain M1F28_RS01875 PF16353 Domain of unknown function(DUF4981) M1F28_RS01875 PF00703 Glycosyl hydrolases family 2 M1F28_RS01875 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_RS01875 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_RS01885 PF05524 PEP-utilising enzyme, N-terminal M1F28_RS01885 PF00391 PEP-utilising enzyme, mobile domain M1F28_RS01885 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_RS01885 PF00381 PTS HPr component phosphorylation site M1F28_RS01885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M1F28_RS01890 PF02734 DAK2 domain M1F28_RS01895 PF02733 Dak1 domain M1F28_RS01905 PF02569 Pantoate-beta-alanine ligase M1F28_RS01910 PF02261 Aspartate decarboxylase M1F28_RS01920 PF01336 OB-fold nucleic acid binding domain M1F28_RS01920 PF00152 tRNA synthetases class II (D, K and N) M1F28_RS01925 PF03176 MMPL family M1F28_RS01930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS01930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS01935 PF00230 Major intrinsic protein M1F28_RS01950 PF02754 Cysteine-rich domain M1F28_RS01950 PF13183 4Fe-4S dicluster domain M1F28_RS01955 PF00890 FAD binding domain M1F28_RS01960 PF01266 FAD dependent oxidoreductase M1F28_RS01960 PF04324 BFD-like [2Fe-2S] binding domain M1F28_RS01975 PF10576 Iron-sulfur binding domain of endonuclease III M1F28_RS01975 PF00633 Helix-hairpin-helix motif M1F28_RS01975 PF00730 HhH-GPD superfamily base excision DNA repair protein M1F28_RS01985 PF06745 KaiC M1F28_RS01985 PF18073 Rubredoxin metal binding domain M1F28_RS01990 PF02080 TrkA-C domain M1F28_RS01990 PF02254 TrkA-N domain M1F28_RS01995 PF02386 Cation transport protein M1F28_RS02000 PF12728 Helix-turn-helix domain M1F28_RS02010 PF01047 MarR family M1F28_RS02015 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_RS02025 PF01040 UbiA prenyltransferase family M1F28_RS02030 PF13193 AMP-binding enzyme C-terminal domain M1F28_RS02030 PF00501 AMP-binding enzyme M1F28_RS02040 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS02055 PF00378 Enoyl-CoA hydratase/isomerase M1F28_RS02060 PF13378 Enolase C-terminal domain-like M1F28_RS02060 PF18374 Enolase N-terminal domain-like M1F28_RS02065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_RS02065 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_RS02070 PF13180 PDZ domain M1F28_RS02075 PF00425 chorismate binding enzyme M1F28_RS02080 PF01209 ubiE/COQ5 methyltransferase family M1F28_RS02085 PF01494 FAD binding domain M1F28_RS02090 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M1F28_RS02095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M1F28_RS02100 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M1F28_RS02105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M1F28_RS02115 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M1F28_RS02115 PF10531 SLBB domain M1F28_RS02115 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M1F28_RS02120 PF00384 Molybdopterin oxidoreductase M1F28_RS02120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M1F28_RS02120 PF01568 Molydopterin dinucleotide binding domain M1F28_RS02125 PF00146 NADH dehydrogenase M1F28_RS02130 PF12838 4Fe-4S dicluster domain M1F28_RS02135 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M1F28_RS02140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M1F28_RS02145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M1F28_RS02145 PF00361 Proton-conducting membrane transporter M1F28_RS02150 PF00361 Proton-conducting membrane transporter M1F28_RS02155 PF00361 Proton-conducting membrane transporter M1F28_RS02160 PF00348 Polyprenyl synthetase M1F28_RS02165 PF01043 SecA preprotein cross-linking domain M1F28_RS02165 PF07516 SecA Wing and Scaffold domain M1F28_RS02165 PF07517 SecA DEAD-like domain M1F28_RS02205 PF13476 AAA domain M1F28_RS02210 PF12320 Type 5 capsule protein repressor C-terminal domain M1F28_RS02210 PF00149 Calcineurin-like phosphoesterase M1F28_RS02215 PF00459 Inositol monophosphatase family M1F28_RS02220 PF03193 RsgA GTPase M1F28_RS02225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1F28_RS02250 PF07859 alpha/beta hydrolase fold M1F28_RS02260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_RS02265 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS02270 PF00005 ABC transporter M1F28_RS02270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS02275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS02275 PF00005 ABC transporter M1F28_RS02280 PF00701 Dihydrodipicolinate synthetase family M1F28_RS02285 PF00480 ROK family M1F28_RS02290 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M1F28_RS02295 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M1F28_RS02300 PF01979 Amidohydrolase family M1F28_RS02305 PF04542 Sigma-70 region 2 M1F28_RS02305 PF08281 Sigma-70, region 4 M1F28_RS02320 PF08239 Bacterial SH3 domain M1F28_RS02320 PF00877 NlpC/P60 family M1F28_RS02320 PF01476 LysM domain M1F28_RS02330 PF16870 2-oxoglutarate dehydrogenase C-terminal M1F28_RS02330 PF16078 2-oxoglutarate dehydrogenase N-terminus M1F28_RS02330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1F28_RS02330 PF02779 Transketolase, pyrimidine binding domain M1F28_RS02330 PF00676 Dehydrogenase E1 component M1F28_RS02335 PF00571 CBS domain M1F28_RS02335 PF03471 Transporter associated domain M1F28_RS02335 PF01595 Cyclin M transmembrane N-terminal domain M1F28_RS02340 PF01595 Cyclin M transmembrane N-terminal domain M1F28_RS02340 PF00571 CBS domain M1F28_RS02345 PF01551 Peptidase family M23 M1F28_RS02350 PF03009 Glycerophosphoryl diester phosphodiesterase family M1F28_RS02365 PF00005 ABC transporter M1F28_RS02390 PF05746 DALR anticodon binding domain M1F28_RS02390 PF00750 tRNA synthetases class I (R) M1F28_RS02390 PF03485 Arginyl tRNA synthetase N terminal domain M1F28_RS02395 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M1F28_RS02395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M1F28_RS02400 PF00742 Homoserine dehydrogenase M1F28_RS02400 PF01842 ACT domain M1F28_RS02400 PF03447 Homoserine dehydrogenase, NAD binding domain M1F28_RS02405 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_RS02410 PF00288 GHMP kinases N terminal domain M1F28_RS02415 PF07497 Rho termination factor, RNA-binding domain M1F28_RS02415 PF07498 Rho termination factor, N-terminal domain M1F28_RS02415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_RS02420 PF01197 Ribosomal protein L31 M1F28_RS02425 PF03462 PCRF domain M1F28_RS02425 PF00472 RF-1 domain M1F28_RS02430 PF17827 PrmC N-terminal domain M1F28_RS02435 PF01300 Telomere recombination M1F28_RS02440 PF00953 Glycosyl transferase family 4 M1F28_RS02450 PF00119 ATP synthase A chain M1F28_RS02455 PF00137 ATP synthase subunit C M1F28_RS02460 PF00430 ATP synthase B/B' CF(0) M1F28_RS02465 PF00213 ATP synthase delta (OSCP) subunit M1F28_RS02470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_RS02470 PF00306 ATP synthase alpha/beta chain, C terminal domain M1F28_RS02470 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1F28_RS02475 PF00231 ATP synthase M1F28_RS02480 PF02874 ATP synthase alpha/beta family, beta-barrel domain M1F28_RS02480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M1F28_RS02485 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M1F28_RS02485 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M1F28_RS02495 PF01939 Endonuclease NucS M1F28_RS02535 PF00128 Alpha amylase, catalytic domain M1F28_RS02535 PF16657 Maltogenic Amylase, C-terminal domain M1F28_RS02540 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS02550 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS02550 PF14785 Maltose transport system permease protein MalF P2 domain M1F28_RS02555 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS02565 PF02806 Alpha amylase, C-terminal all-beta domain M1F28_RS02565 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_RS02565 PF00128 Alpha amylase, catalytic domain M1F28_RS02570 PF18085 Maltokinase N-terminal cap domain M1F28_RS02570 PF01636 Phosphotransferase enzyme family M1F28_RS02575 PF16657 Maltogenic Amylase, C-terminal domain M1F28_RS02575 PF00128 Alpha amylase, catalytic domain M1F28_RS02580 PF11896 Domain of unknown function (DUF3416) M1F28_RS02580 PF00128 Alpha amylase, catalytic domain M1F28_RS02590 PF00005 ABC transporter M1F28_RS02610 PF07885 Ion channel M1F28_RS02615 PF00343 Carbohydrate phosphorylase M1F28_RS02620 PF00579 tRNA synthetases class I (W and Y) M1F28_RS02625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_RS02625 PF00128 Alpha amylase, catalytic domain M1F28_RS02630 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain M1F28_RS02630 PF09297 NADH pyrophosphatase zinc ribbon domain M1F28_RS02630 PF00293 NUDIX domain M1F28_RS02635 PF00570 HRDC domain M1F28_RS02635 PF13361 UvrD-like helicase C-terminal domain M1F28_RS02635 PF00580 UvrD/REP helicase N-terminal domain M1F28_RS02650 PF05362 Lon protease (S16) C-terminal proteolytic domain M1F28_RS02650 PF13180 PDZ domain M1F28_RS02660 PF03699 Uncharacterised protein family (UPF0182) M1F28_RS02665 PF12905 Endo-alpha-N-acetylgalactosaminidase M1F28_RS02665 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_RS02665 PF08305 NPCBM/NEW2 domain M1F28_RS02665 PF17451 Glycosyl hydrolase 101 beta sandwich domain M1F28_RS02665 PF17974 Galactose-binding domain-like M1F28_RS02665 PF18080 Galactose mutarotase-like fold domain M1F28_RS02690 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS02690 PF00155 Aminotransferase class I and II M1F28_RS02695 PF00005 ABC transporter M1F28_RS02705 PF01699 Sodium/calcium exchanger protein M1F28_RS02715 PF00890 FAD binding domain M1F28_RS02715 PF02910 Fumarate reductase flavoprotein C-term M1F28_RS02725 PF00296 Luciferase-like monooxygenase M1F28_RS02735 PF00186 Dihydrofolate reductase M1F28_RS02740 PF00303 Thymidylate synthase M1F28_RS02750 PF12282 Signal transduction histidine kinase M1F28_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS02750 PF07568 Histidine kinase M1F28_RS02755 PF02467 Transcription factor WhiB M1F28_RS02765 PF00005 ABC transporter M1F28_RS02765 PF02687 FtsX-like permease family M1F28_RS02765 PF12704 MacB-like periplasmic core domain M1F28_RS02770 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS02770 PF00072 Response regulator receiver domain M1F28_RS02775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS02775 PF07730 Histidine kinase M1F28_RS02780 PF02586 SOS response associated peptidase (SRAP) M1F28_RS02785 PF01653 NAD-dependent DNA ligase adenylation domain M1F28_RS02785 PF12826 Helix-hairpin-helix motif M1F28_RS02785 PF00533 BRCA1 C Terminus (BRCT) domain M1F28_RS02785 PF03120 NAD-dependent DNA ligase OB-fold domain M1F28_RS02785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M1F28_RS02790 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS02790 PF07702 UTRA domain M1F28_RS02795 PF03747 ADP-ribosylglycohydrolase M1F28_RS02805 PF00294 pfkB family carbohydrate kinase M1F28_RS02810 PF02661 Fic/DOC family M1F28_RS02810 PF13784 Fic/DOC family N-terminal M1F28_RS02820 PF04151 Bacterial pre-peptidase C-terminal domain M1F28_RS02820 PF00082 Subtilase family M1F28_RS02825 PF13091 PLD-like domain M1F28_RS02825 PF13396 Phospholipase_D-nuclease N-terminal M1F28_RS02830 PF02686 Glu-tRNAGln amidotransferase C subunit M1F28_RS02835 PF01425 Amidase M1F28_RS02840 PF02934 GatB/GatE catalytic domain M1F28_RS02840 PF02637 GatB domain M1F28_RS02845 PF00390 Malic enzyme, N-terminal domain M1F28_RS02845 PF03949 Malic enzyme, NAD binding domain M1F28_RS02885 PF08241 Methyltransferase domain M1F28_RS02890 PF00920 Dehydratase family M1F28_RS02895 PF06826 Predicted Permease Membrane Region M1F28_RS02895 PF02080 TrkA-C domain M1F28_RS02900 PF00205 Thiamine pyrophosphate enzyme, central domain M1F28_RS02900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_RS02900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_RS02905 PF10369 Small subunit of acetolactate synthase M1F28_RS02910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M1F28_RS02910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M1F28_RS02915 PF10415 Fumarase C C-terminus M1F28_RS02915 PF00206 Lyase M1F28_RS02930 PF01063 Amino-transferase class IV M1F28_RS02935 PF01228 Glycine radical M1F28_RS02935 PF02901 Pyruvate formate lyase-like M1F28_RS02940 PF01228 Glycine radical M1F28_RS02940 PF02901 Pyruvate formate lyase-like M1F28_RS02945 PF04055 Radical SAM superfamily M1F28_RS02950 PF01168 Alanine racemase, N-terminal domain M1F28_RS02955 PF00270 DEAD/DEAH box helicase M1F28_RS02955 PF00271 Helicase conserved C-terminal domain M1F28_RS02955 PF08148 DSHCT (NUC185) domain M1F28_RS02965 PF13439 Glycosyltransferase Family 4 M1F28_RS02965 PF00534 Glycosyl transferases group 1 M1F28_RS02970 PF12804 MobA-like NTP transferase domain M1F28_RS02975 PF04991 LicD family M1F28_RS02980 PF01501 Glycosyl transferase family 8 M1F28_RS02980 PF00535 Glycosyl transferase family 2 M1F28_RS03000 PF00535 Glycosyl transferase family 2 M1F28_RS03015 PF00535 Glycosyl transferase family 2 M1F28_RS03025 PF00535 Glycosyl transferase family 2 M1F28_RS03050 PF00929 Exonuclease M1F28_RS03075 PF00005 ABC transporter M1F28_RS03075 PF12848 ABC transporter M1F28_RS03085 PF02446 4-alpha-glucanotransferase M1F28_RS03095 PF13673 Acetyltransferase (GNAT) domain M1F28_RS03095 PF13302 Acetyltransferase (GNAT) domain M1F28_RS03095 PF03352 Methyladenine glycosylase M1F28_RS03095 PF00117 Glutamine amidotransferase class-I M1F28_RS03095 PF00958 GMP synthase C terminal domain M1F28_RS03100 PF01433 Peptidase family M1 domain M1F28_RS03100 PF11838 ERAP1-like C-terminal domain M1F28_RS03105 PF05661 Protein of unknown function (DUF808) M1F28_RS03110 PF05649 Peptidase family M13 M1F28_RS03110 PF01431 Peptidase family M13 M1F28_RS03115 PF02502 Ribose/Galactose Isomerase M1F28_RS03120 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_RS03125 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_RS03130 PF09186 Domain of unknown function (DUF1949) M1F28_RS03130 PF01205 Uncharacterized protein family UPF0029 M1F28_RS03135 PF01783 Ribosomal L32p protein family M1F28_RS03145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_RS03145 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS03160 PF12848 ABC transporter M1F28_RS03160 PF16326 ABC transporter C-terminal domain M1F28_RS03160 PF00005 ABC transporter M1F28_RS03175 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS03180 PF02837 Glycosyl hydrolases family 2, sugar binding domain M1F28_RS03180 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M1F28_RS03180 PF00703 Glycosyl hydrolases family 2 M1F28_RS03190 PF00933 Glycosyl hydrolase family 3 N terminal domain M1F28_RS03200 PF00248 Aldo/keto reductase family M1F28_RS03205 PF05698 Bacterial trigger factor protein (TF) C-terminus M1F28_RS03205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M1F28_RS03205 PF05697 Bacterial trigger factor protein (TF) M1F28_RS03210 PF00574 Clp protease M1F28_RS03215 PF00574 Clp protease M1F28_RS03220 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_RS03220 PF07724 AAA domain (Cdc48 subfamily) M1F28_RS03220 PF06689 ClpX C4-type zinc finger M1F28_RS03225 PF01817 Chorismate mutase type II M1F28_RS03225 PF02153 Prephenate dehydrogenase M1F28_RS03230 PF00501 AMP-binding enzyme M1F28_RS03235 PF08264 Anticodon-binding domain of tRNA M1F28_RS03235 PF00133 tRNA synthetases class I (I, L, M and V) M1F28_RS03245 PF03807 NADP oxidoreductase coenzyme F420-dependent M1F28_RS03245 PF14748 Pyrroline-5-carboxylate reductase dimerisation M1F28_RS03260 PF00133 tRNA synthetases class I (I, L, M and V) M1F28_RS03260 PF08264 Anticodon-binding domain of tRNA M1F28_RS03265 PF08245 Mur ligase middle domain M1F28_RS03265 PF02875 Mur ligase family, glutamate ligase domain M1F28_RS03270 PF00334 Nucleoside diphosphate kinase M1F28_RS03275 PF02463 RecF/RecN/SMC N terminal domain M1F28_RS03275 PF06470 SMC proteins Flexible Hinge Domain M1F28_RS03285 PF01289 Thiol-activated cytolysin M1F28_RS03285 PF17440 Thiol-activated cytolysin beta sandwich domain M1F28_RS03290 PF02881 SRP54-type protein, helical bundle domain M1F28_RS03290 PF00448 SRP54-type protein, GTPase domain M1F28_RS03295 PF02978 Signal peptide binding domain M1F28_RS03295 PF00448 SRP54-type protein, GTPase domain M1F28_RS03295 PF02881 SRP54-type protein, helical bundle domain M1F28_RS03300 PF01979 Amidohydrolase family M1F28_RS03310 PF01545 Cation efflux family M1F28_RS03310 PF16916 Dimerisation domain of Zinc Transporter M1F28_RS03315 PF00886 Ribosomal protein S16 M1F28_RS03325 PF01782 RimM N-terminal domain M1F28_RS03325 PF05239 PRC-barrel domain M1F28_RS03330 PF01746 tRNA (Guanine-1)-methyltransferase M1F28_RS03335 PF01245 Ribosomal protein L19 M1F28_RS03340 PF10502 Signal peptidase, peptidase S26 M1F28_RS03345 PF01351 Ribonuclease HII M1F28_RS03350 PF10611 Protein of unknown function (DUF2469) M1F28_RS03355 PF02021 Uncharacterised protein family UPF0102 M1F28_RS03360 PF01078 Magnesium chelatase, subunit ChlI M1F28_RS03360 PF13335 Magnesium chelatase, subunit ChlI C-terminal M1F28_RS03365 PF02481 DNA recombination-mediator protein A M1F28_RS03365 PF17782 DprA winged helix domain M1F28_RS03370 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_RS03370 PF00589 Phage integrase family M1F28_RS03375 PF01551 Peptidase family M23 M1F28_RS03380 PF03458 UPF0126 domain M1F28_RS03385 PF00318 Ribosomal protein S2 M1F28_RS03390 PF00889 Elongation factor TS M1F28_RS03395 PF01012 Electron transfer flavoprotein domain M1F28_RS03400 PF01012 Electron transfer flavoprotein domain M1F28_RS03400 PF00766 Electron transfer flavoprotein FAD-binding domain M1F28_RS03405 PF01494 FAD binding domain M1F28_RS03415 PF07690 Major Facilitator Superfamily M1F28_RS03425 PF00696 Amino acid kinase family M1F28_RS03430 PF01765 Ribosome recycling factor M1F28_RS03440 PF04055 Radical SAM superfamily M1F28_RS03450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M1F28_RS03450 PF13288 DXP reductoisomerase C-terminal domain M1F28_RS03450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M1F28_RS03455 PF02163 Peptidase family M50 M1F28_RS03455 PF17820 PDZ domain M1F28_RS03460 PF04551 GcpE protein M1F28_RS03470 PF04073 Aminoacyl-tRNA editing domain M1F28_RS03470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_RS03470 PF03129 Anticodon binding domain M1F28_RS03480 PF17384 RimP C-terminal SH3 domain M1F28_RS03480 PF02576 RimP N-terminal domain M1F28_RS03485 PF08529 NusA N-terminal domain M1F28_RS03485 PF13184 NusA-like KH domain M1F28_RS03495 PF04760 Translation initiation factor IF-2, N-terminal region M1F28_RS03495 PF11987 Translation-initiation factor 2 M1F28_RS03495 PF00009 Elongation factor Tu GTP binding domain M1F28_RS03500 PF02033 Ribosome-binding factor A M1F28_RS03505 PF09142 tRNA Pseudouridine synthase II, C terminal M1F28_RS03505 PF01509 TruB family pseudouridylate synthase (N terminal domain) M1F28_RS03505 PF16198 tRNA pseudouridylate synthase B C-terminal domain M1F28_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS03510 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS03510 PF00989 PAS fold M1F28_RS03515 PF00072 Response regulator receiver domain M1F28_RS03515 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS03520 PF07690 Major Facilitator Superfamily M1F28_RS03530 PF08402 TOBE domain M1F28_RS03530 PF00005 ABC transporter M1F28_RS03550 PF06574 FAD synthetase M1F28_RS03550 PF01687 Riboflavin kinase M1F28_RS03560 PF00005 ABC transporter M1F28_RS03570 PF00312 Ribosomal protein S15 M1F28_RS03575 PF00013 KH domain M1F28_RS03575 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M1F28_RS03575 PF01138 3' exoribonuclease family, domain 1 M1F28_RS03575 PF00575 S1 RNA binding domain M1F28_RS03580 PF00675 Insulinase (Peptidase family M16) M1F28_RS03580 PF05193 Peptidase M16 inactive domain M1F28_RS03585 PF05173 Dihydrodipicolinate reductase, C-terminus M1F28_RS03585 PF01113 Dihydrodipicolinate reductase, N-terminus M1F28_RS03590 PF12419 SNF2 Helicase protein M1F28_RS03590 PF00176 SNF2 family N-terminal domain M1F28_RS03590 PF00271 Helicase conserved C-terminal domain M1F28_RS03600 PF00701 Dihydrodipicolinate synthetase family M1F28_RS03605 PF12706 Beta-lactamase superfamily domain M1F28_RS03605 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M1F28_RS03605 PF17770 Ribonuclease J C-terminal domain M1F28_RS03610 PF09397 Ftsk gamma domain M1F28_RS03610 PF01580 FtsK/SpoIIIE family M1F28_RS03610 PF17854 FtsK alpha domain M1F28_RS03620 PF01066 CDP-alcohol phosphatidyltransferase M1F28_RS03625 PF02464 Competence-damaged protein M1F28_RS03625 PF18146 Damage-inducible protein CinA KH domain M1F28_RS03625 PF00994 Probable molybdopterin binding domain M1F28_RS03640 PF00154 recA bacterial DNA recombination protein M1F28_RS03645 PF02631 RecX family M1F28_RS03650 PF00919 Uncharacterized protein family UPF0004 M1F28_RS03650 PF04055 Radical SAM superfamily M1F28_RS03660 PF05175 Methyltransferase small domain M1F28_RS03660 PF08468 Methyltransferase small domain N-terminal M1F28_RS03665 PF16360 GTP-binding GTPase Middle Region M1F28_RS03665 PF13167 GTP-binding GTPase N-terminal M1F28_RS03665 PF01926 50S ribosome-binding GTPase M1F28_RS03670 PF13307 Helicase C-terminal domain M1F28_RS03675 PF01726 LexA DNA binding domain M1F28_RS03675 PF00717 Peptidase S24-like M1F28_RS03685 PF03477 ATP cone domain M1F28_RS03690 PF00501 AMP-binding enzyme M1F28_RS03690 PF13193 AMP-binding enzyme C-terminal domain M1F28_RS03695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1F28_RS03695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1F28_RS03715 PF11799 impB/mucB/samB family C-terminal domain M1F28_RS03715 PF00817 impB/mucB/samB family M1F28_RS03725 PF02381 MraZ protein, putative antitoxin-like M1F28_RS03730 PF01795 MraW methylase family M1F28_RS03740 PF03717 Penicillin-binding Protein dimerisation domain M1F28_RS03740 PF00905 Penicillin binding protein transpeptidase domain M1F28_RS03745 PF02875 Mur ligase family, glutamate ligase domain M1F28_RS03745 PF08245 Mur ligase middle domain M1F28_RS03745 PF01225 Mur ligase family, catalytic domain M1F28_RS03750 PF01225 Mur ligase family, catalytic domain M1F28_RS03750 PF02875 Mur ligase family, glutamate ligase domain M1F28_RS03750 PF08245 Mur ligase middle domain M1F28_RS03755 PF00953 Glycosyl transferase family 4 M1F28_RS03755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M1F28_RS03760 PF02875 Mur ligase family, glutamate ligase domain M1F28_RS03760 PF08245 Mur ligase middle domain M1F28_RS03765 PF01098 Cell cycle protein M1F28_RS03770 PF03033 Glycosyltransferase family 28 N-terminal domain M1F28_RS03770 PF04101 Glycosyltransferase family 28 C-terminal domain M1F28_RS03775 PF01225 Mur ligase family, catalytic domain M1F28_RS03775 PF08245 Mur ligase middle domain M1F28_RS03775 PF02875 Mur ligase family, glutamate ligase domain M1F28_RS03785 PF12327 FtsZ family, C-terminal domain M1F28_RS03785 PF00091 Tubulin/FtsZ family, GTPase domain M1F28_RS03790 PF02578 Multi-copper polyphenol oxidoreductase laccase M1F28_RS03795 PF04472 Cell division protein SepF M1F28_RS03810 PF01252 Signal peptidase (SPase) II M1F28_RS03815 PF00849 RNA pseudouridylate synthase M1F28_RS03825 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1F28_RS03825 PF14579 Helix-hairpin-helix motif M1F28_RS03825 PF02811 PHP domain M1F28_RS03825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1F28_RS03840 PF01475 Ferric uptake regulator family M1F28_RS03845 PF00950 ABC 3 transport family M1F28_RS03850 PF00005 ABC transporter M1F28_RS03860 PF03129 Anticodon binding domain M1F28_RS03860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_RS03870 PF01207 Dihydrouridine synthase (Dus) M1F28_RS03880 PF01966 HD domain M1F28_RS03880 PF13286 Phosphohydrolase-associated domain M1F28_RS03885 PF10410 DnaB-helicase binding domain of primase M1F28_RS03885 PF08278 DNA primase DnaG DnaB-binding M1F28_RS03885 PF13662 Toprim domain M1F28_RS03885 PF08275 DNA primase catalytic core, N-terminal domain M1F28_RS03885 PF01807 CHC2 zinc finger M1F28_RS03895 PF00902 Sec-independent protein translocase protein (TatC) M1F28_RS03900 PF02416 mttA/Hcf106 family M1F28_RS03905 PF02416 mttA/Hcf106 family M1F28_RS03935 PF01032 FecCD transport family M1F28_RS03940 PF00005 ABC transporter M1F28_RS03970 PF01327 Polypeptide deformylase M1F28_RS03975 PF08338 Domain of unknown function (DUF1731) M1F28_RS03975 PF01370 NAD dependent epimerase/dehydratase family M1F28_RS03995 PF01300 Telomere recombination M1F28_RS04000 PF13419 Haloacid dehalogenase-like hydrolase M1F28_RS04005 PF00664 ABC transporter transmembrane region M1F28_RS04005 PF00005 ABC transporter M1F28_RS04010 PF00664 ABC transporter transmembrane region M1F28_RS04010 PF00005 ABC transporter M1F28_RS04015 PF00456 Transketolase, thiamine diphosphate binding domain M1F28_RS04015 PF17831 Pyruvate dehydrogenase E1 component middle domain M1F28_RS04040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1F28_RS04045 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M1F28_RS04050 PF01784 NIF3 (NGG1p interacting factor 3) M1F28_RS04070 PF00480 ROK family M1F28_RS04075 PF00557 Metallopeptidase family M24 M1F28_RS04085 PF00120 Glutamine synthetase, catalytic domain M1F28_RS04085 PF03951 Glutamine synthetase, beta-Grasp domain M1F28_RS04090 PF08335 GlnD PII-uridylyltransferase M1F28_RS04090 PF03710 Glutamate-ammonia ligase adenylyltransferase M1F28_RS04100 PF03951 Glutamine synthetase, beta-Grasp domain M1F28_RS04100 PF00120 Glutamine synthetase, catalytic domain M1F28_RS04120 PF02817 e3 binding domain M1F28_RS04120 PF00364 Biotin-requiring enzyme M1F28_RS04120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M1F28_RS04125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_RS04125 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS04135 PF02789 Cytosol aminopeptidase family, N-terminal domain M1F28_RS04135 PF00883 Cytosol aminopeptidase family, catalytic domain M1F28_RS04150 PF07687 Peptidase dimerisation domain M1F28_RS04150 PF01546 Peptidase family M20/M25/M40 M1F28_RS04160 PF01521 Iron-sulphur cluster biosynthesis M1F28_RS04170 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M1F28_RS04170 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M1F28_RS04180 PF01541 GIY-YIG catalytic domain M1F28_RS04180 PF00929 Exonuclease M1F28_RS04190 PF00365 Phosphofructokinase M1F28_RS04195 PF01474 Class-II DAHP synthetase family M1F28_RS04200 PF00069 Protein kinase domain M1F28_RS04200 PF03793 PASTA domain M1F28_RS04205 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M1F28_RS04205 PF01464 Transglycosylase SLT domain M1F28_RS04215 PF00348 Polyprenyl synthetase M1F28_RS04230 PF00140 Sigma-70 factor, region 1.2 M1F28_RS04230 PF04542 Sigma-70 region 2 M1F28_RS04230 PF04539 Sigma-70 region 3 M1F28_RS04230 PF04545 Sigma-70, region 4 M1F28_RS04235 PF00929 Exonuclease M1F28_RS04235 PF13307 Helicase C-terminal domain M1F28_RS04235 PF04851 Type III restriction enzyme, res subunit M1F28_RS04245 PF00204 DNA gyrase B M1F28_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS04245 PF00986 DNA gyrase B subunit, carboxyl terminus M1F28_RS04245 PF01751 Toprim domain M1F28_RS04260 PF03989 DNA gyrase C-terminal domain, beta-propeller M1F28_RS04260 PF00521 DNA gyrase/topoisomerase IV, subunit A M1F28_RS04295 PF02254 TrkA-N domain M1F28_RS04295 PF02080 TrkA-C domain M1F28_RS04300 PF02080 TrkA-C domain M1F28_RS04300 PF02254 TrkA-N domain M1F28_RS04310 PF05958 tRNA (Uracil-5-)-methyltransferase M1F28_RS04315 PF00330 Aconitase family (aconitate hydratase) M1F28_RS04315 PF00694 Aconitase C-terminal domain M1F28_RS04325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M1F28_RS04325 PF02779 Transketolase, pyrimidine binding domain M1F28_RS04325 PF02780 Transketolase, C-terminal domain M1F28_RS04340 PF00128 Alpha amylase, catalytic domain M1F28_RS04340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_RS04345 PF00128 Alpha amylase, catalytic domain M1F28_RS04350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M1F28_RS04350 PF00128 Alpha amylase, catalytic domain M1F28_RS04405 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS04405 PF00072 Response regulator receiver domain M1F28_RS04410 PF03313 Serine dehydratase alpha chain M1F28_RS04410 PF03315 Serine dehydratase beta chain M1F28_RS04415 PF03129 Anticodon binding domain M1F28_RS04415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M1F28_RS04415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1F28_RS04420 PF01066 CDP-alcohol phosphatidyltransferase M1F28_RS04430 PF13439 Glycosyltransferase Family 4 M1F28_RS04440 PF00293 NUDIX domain M1F28_RS04445 PF01709 Transcriptional regulator M1F28_RS04450 PF02075 Crossover junction endodeoxyribonuclease RuvC M1F28_RS04455 PF01330 RuvA N terminal domain M1F28_RS04455 PF07499 RuvA, C-terminal domain M1F28_RS04460 PF05491 RuvB C-terminal winged helix domain M1F28_RS04460 PF17864 RuvB AAA lid domain M1F28_RS04460 PF05496 Holliday junction DNA helicase RuvB P-loop domain M1F28_RS04470 PF07549 SecD/SecF GG Motif M1F28_RS04470 PF02355 Protein export membrane protein M1F28_RS04475 PF07549 SecD/SecF GG Motif M1F28_RS04475 PF02355 Protein export membrane protein M1F28_RS04480 PF00156 Phosphoribosyl transferase domain M1F28_RS04485 PF02824 TGS domain M1F28_RS04485 PF04607 Region found in RelA / SpoT proteins M1F28_RS04485 PF13291 ACT domain M1F28_RS04495 PF03993 Domain of Unknown Function (DUF349) M1F28_RS04500 PF00753 Metallo-beta-lactamase superfamily M1F28_RS04505 PF03129 Anticodon binding domain M1F28_RS04505 PF13393 Histidyl-tRNA synthetase M1F28_RS04510 PF01926 50S ribosome-binding GTPase M1F28_RS04510 PF07650 KH domain M1F28_RS04515 PF01926 50S ribosome-binding GTPase M1F28_RS04515 PF07650 KH domain M1F28_RS04525 PF00271 Helicase conserved C-terminal domain M1F28_RS04525 PF00270 DEAD/DEAH box helicase M1F28_RS04525 PF03880 DbpA RNA binding domain M1F28_RS04535 PF00152 tRNA synthetases class II (D, K and N) M1F28_RS04535 PF01336 OB-fold nucleic acid binding domain M1F28_RS04535 PF02938 GAD domain M1F28_RS04550 PF03176 MMPL family M1F28_RS04555 PF12002 MgsA AAA+ ATPase C terminal M1F28_RS04555 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS04555 PF16193 AAA C-terminal domain M1F28_RS04560 PF00163 Ribosomal protein S4/S9 N-terminal domain M1F28_RS04560 PF01479 S4 domain M1F28_RS04570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M1F28_RS04570 PF01411 tRNA synthetases class II (A) M1F28_RS04570 PF02272 DHHA1 domain M1F28_RS04575 PF03652 Holliday junction resolvase M1F28_RS04595 PF01264 Chorismate synthase M1F28_RS04600 PF01761 3-dehydroquinate synthase M1F28_RS04600 PF01202 Shikimate kinase M1F28_RS04605 PF01202 Shikimate kinase M1F28_RS04610 PF00403 Heavy-metal-associated domain M1F28_RS04615 PF01132 Elongation factor P (EF-P) OB domain M1F28_RS04615 PF08207 Elongation factor P (EF-P) KOW-like domain M1F28_RS04615 PF09285 Elongation factor P, C-terminal M1F28_RS04620 PF01029 NusB family M1F28_RS04625 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M1F28_RS04625 PF00117 Glutamine amidotransferase class-I M1F28_RS04630 PF02142 MGS-like domain M1F28_RS04630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M1F28_RS04630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1F28_RS04640 PF00625 Guanylate kinase M1F28_RS04645 PF01192 RNA polymerase Rpb6 M1F28_RS04650 PF02441 Flavoprotein M1F28_RS04650 PF04127 DNA / pantothenate metabolism flavoprotein M1F28_RS04655 PF00438 S-adenosylmethionine synthetase, N-terminal domain M1F28_RS04655 PF02772 S-adenosylmethionine synthetase, central domain M1F28_RS04655 PF02773 S-adenosylmethionine synthetase, C-terminal domain M1F28_RS04660 PF17764 3′ DNA-binding domain (3′BD) M1F28_RS04665 PF00551 Formyl transferase M1F28_RS04665 PF02911 Formyl transferase, C-terminal domain M1F28_RS04670 PF01029 NusB family M1F28_RS04670 PF01189 16S rRNA methyltransferase RsmB/F M1F28_RS04675 PF00834 Ribulose-phosphate 3 epimerase family M1F28_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS04685 PF09084 NMT1/THI5 like M1F28_RS04690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M1F28_RS04695 PF08029 HisG, C-terminal domain M1F28_RS04695 PF01634 ATP phosphoribosyltransferase M1F28_RS04720 PF00781 Diacylglycerol kinase catalytic domain M1F28_RS04725 PF08148 DSHCT (NUC185) domain M1F28_RS04725 PF00271 Helicase conserved C-terminal domain M1F28_RS04725 PF00270 DEAD/DEAH box helicase M1F28_RS04730 PF00535 Glycosyl transferase family 2 M1F28_RS04730 PF00795 Carbon-nitrogen hydrolase M1F28_RS04735 PF00535 Glycosyl transferase family 2 M1F28_RS04740 PF13397 RNA polymerase-binding protein M1F28_RS04750 PF13411 MerR HTH family regulatory protein M1F28_RS04760 PF00498 FHA domain M1F28_RS04765 PF01433 Peptidase family M1 domain M1F28_RS04765 PF11838 ERAP1-like C-terminal domain M1F28_RS04775 PF00365 Phosphofructokinase M1F28_RS04780 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M1F28_RS04780 PF01926 50S ribosome-binding GTPase M1F28_RS04785 PF02224 Cytidylate kinase M1F28_RS04795 PF00849 RNA pseudouridylate synthase M1F28_RS04795 PF01479 S4 domain M1F28_RS04800 PF04079 Segregation and condensation complex subunit ScpB M1F28_RS04805 PF02616 Segregation and condensation protein ScpA M1F28_RS04810 PF13614 AAA domain M1F28_RS04815 PF00589 Phage integrase family M1F28_RS04815 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_RS04820 PF02779 Transketolase, pyrimidine binding domain M1F28_RS04820 PF02780 Transketolase, C-terminal domain M1F28_RS04820 PF00456 Transketolase, thiamine diphosphate binding domain M1F28_RS04825 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1F28_RS04830 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M1F28_RS04830 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M1F28_RS04840 PF03840 Preprotein translocase SecG subunit M1F28_RS04845 PF00121 Triosephosphate isomerase M1F28_RS04850 PF00162 Phosphoglycerate kinase M1F28_RS04855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M1F28_RS04855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M1F28_RS04860 PF02650 WhiA C-terminal HTH domain M1F28_RS04860 PF14527 WhiA LAGLIDADG-like domain M1F28_RS04860 PF10298 WhiA N-terminal LAGLIDADG-like domain M1F28_RS04865 PF01933 Uncharacterised protein family UPF0052 M1F28_RS04870 PF03668 P-loop ATPase protein family M1F28_RS04875 PF01541 GIY-YIG catalytic domain M1F28_RS04875 PF08459 UvrC Helix-hairpin-helix N-terminal M1F28_RS04875 PF02151 UvrB/uvrC motif M1F28_RS04880 PF00005 ABC transporter M1F28_RS04880 PF17755 UvrA DNA-binding domain M1F28_RS04880 PF17760 UvrA interaction domain M1F28_RS04890 PF13593 SBF-like CPA transporter family (DUF4137) M1F28_RS04895 PF03741 Integral membrane protein TerC family M1F28_RS04900 PF00271 Helicase conserved C-terminal domain M1F28_RS04900 PF04851 Type III restriction enzyme, res subunit M1F28_RS04900 PF02151 UvrB/uvrC motif M1F28_RS04900 PF12344 Ultra-violet resistance protein B M1F28_RS04900 PF17757 UvrB interaction domain M1F28_RS04905 PF01121 Dephospho-CoA kinase M1F28_RS04910 PF01470 Pyroglutamyl peptidase M1F28_RS04915 PF00005 ABC transporter M1F28_RS04925 PF00575 S1 RNA binding domain M1F28_RS04930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M1F28_RS04930 PF00476 DNA polymerase family A M1F28_RS04930 PF01367 5'-3' exonuclease, C-terminal SAM fold M1F28_RS04940 PF03861 ANTAR domain M1F28_RS04940 PF00072 Response regulator receiver domain M1F28_RS04950 PF00224 Pyruvate kinase, barrel domain M1F28_RS04950 PF02887 Pyruvate kinase, alpha/beta domain M1F28_RS04955 PF01790 Prolipoprotein diacylglyceryl transferase M1F28_RS04960 PF00218 Indole-3-glycerol phosphate synthase M1F28_RS04965 PF01502 Phosphoribosyl-AMP cyclohydrolase M1F28_RS04970 PF00977 Histidine biosynthesis protein M1F28_RS04985 PF03136 Pup-ligase protein M1F28_RS04990 PF05639 Pup-like protein M1F28_RS04995 PF03136 Pup-ligase protein M1F28_RS05000 PF17758 Proteasomal ATPase OB N-terminal domain M1F28_RS05000 PF16450 Proteasomal ATPase OB C-terminal domain M1F28_RS05000 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS05005 PF08704 tRNA methyltransferase complex GCD14 subunit M1F28_RS05015 PF13419 Haloacid dehalogenase-like hydrolase M1F28_RS05020 PF02673 Bacitracin resistance protein BacA M1F28_RS05035 PF01546 Peptidase family M20/M25/M40 M1F28_RS05035 PF07687 Peptidase dimerisation domain M1F28_RS05040 PF04107 Glutamate-cysteine ligase family 2(GCS2) M1F28_RS05045 PF02540 NAD synthase M1F28_RS05045 PF00117 Glutamine amidotransferase class-I M1F28_RS05045 PF00958 GMP synthase C terminal domain M1F28_RS05050 PF08501 Shikimate dehydrogenase substrate binding domain M1F28_RS05050 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M1F28_RS05070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M1F28_RS05070 PF07733 Bacterial DNA polymerase III alpha NTPase domain M1F28_RS05070 PF02811 PHP domain M1F28_RS05070 PF14579 Helix-hairpin-helix motif M1F28_RS05070 PF01336 OB-fold nucleic acid binding domain M1F28_RS05085 PF01161 Phosphatidylethanolamine-binding protein M1F28_RS05090 PF00588 SpoU rRNA Methylase family M1F28_RS05105 PF00588 SpoU rRNA Methylase family M1F28_RS05110 PF01145 SPFH domain / Band 7 family M1F28_RS05120 PF00005 ABC transporter M1F28_RS05125 PF13439 Glycosyltransferase Family 4 M1F28_RS05125 PF00534 Glycosyl transferases group 1 M1F28_RS05130 PF00483 Nucleotidyl transferase M1F28_RS05135 PF00005 ABC transporter M1F28_RS05135 PF02687 FtsX-like permease family M1F28_RS05135 PF12704 MacB-like periplasmic core domain M1F28_RS05150 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_RS05155 PF00005 ABC transporter M1F28_RS05155 PF12848 ABC transporter M1F28_RS05160 PF00581 Rhodanese-like domain M1F28_RS05165 PF01883 Iron-sulfur cluster assembly protein M1F28_RS05175 PF00266 Aminotransferase class-V M1F28_RS05180 PF00005 ABC transporter M1F28_RS05185 PF00355 Rieske [2Fe-2S] domain M1F28_RS05190 PF01458 Uncharacterized protein family (UPF0051) M1F28_RS05195 PF01458 Uncharacterized protein family (UPF0051) M1F28_RS05210 PF03023 Lipid II flippase MurJ M1F28_RS05230 PF02463 RecF/RecN/SMC N terminal domain M1F28_RS05235 PF01513 ATP-NAD kinase M1F28_RS05240 PF01728 FtsJ-like methyltransferase M1F28_RS05240 PF01479 S4 domain M1F28_RS05250 PF18407 GCN5-related N-acetyltransferase like domain M1F28_RS05250 PF13344 Haloacid dehalogenase-like hydrolase M1F28_RS05280 PF00950 ABC 3 transport family M1F28_RS05285 PF00950 ABC 3 transport family M1F28_RS05290 PF00005 ABC transporter M1F28_RS05295 PF01297 Zinc-uptake complex component A periplasmic M1F28_RS05300 PF00579 tRNA synthetases class I (W and Y) M1F28_RS05305 PF00005 ABC transporter M1F28_RS05315 PF01381 Helix-turn-helix M1F28_RS05325 PF16363 GDP-mannose 4,6 dehydratase M1F28_RS05330 PF01316 Arginine repressor, DNA binding domain M1F28_RS05330 PF02863 Arginine repressor, C-terminal domain M1F28_RS05335 PF00202 Aminotransferase class-III M1F28_RS05345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M1F28_RS05345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M1F28_RS05350 PF04073 Aminoacyl-tRNA editing domain M1F28_RS05355 PF01588 Putative tRNA binding domain M1F28_RS05355 PF03483 B3/4 domain M1F28_RS05355 PF03147 Ferredoxin-fold anticodon binding domain M1F28_RS05355 PF03484 tRNA synthetase B5 domain M1F28_RS05355 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M1F28_RS05360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M1F28_RS05360 PF01409 tRNA synthetases class II core domain (F) M1F28_RS05365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M1F28_RS05370 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1F28_RS05370 PF00588 SpoU rRNA Methylase family M1F28_RS05380 PF00453 Ribosomal protein L20 M1F28_RS05385 PF01632 Ribosomal protein L35 M1F28_RS05390 PF00707 Translation initiation factor IF-3, C-terminal domain M1F28_RS05390 PF05198 Translation initiation factor IF-3, N-terminal domain M1F28_RS05400 PF00977 Histidine biosynthesis protein M1F28_RS05405 PF00117 Glutamine amidotransferase class-I M1F28_RS05415 PF00475 Imidazoleglycerol-phosphate dehydratase M1F28_RS05420 PF00155 Aminotransferase class I and II M1F28_RS05425 PF00815 Histidinol dehydrogenase M1F28_RS05430 PF01255 Putative undecaprenyl diphosphate synthase M1F28_RS05435 PF02565 Recombination protein O C terminal M1F28_RS05435 PF11967 Recombination protein O N terminal M1F28_RS05440 PF08502 LeuA allosteric (dimerisation) domain M1F28_RS05440 PF00682 HMGL-like M1F28_RS05445 PF13191 AAA ATPase domain M1F28_RS05445 PF00069 Protein kinase domain M1F28_RS05465 PF07650 KH domain M1F28_RS05465 PF01926 50S ribosome-binding GTPase M1F28_RS05470 PF00571 CBS domain M1F28_RS05470 PF03471 Transporter associated domain M1F28_RS05470 PF01595 Cyclin M transmembrane N-terminal domain M1F28_RS05475 PF02130 Uncharacterized protein family UPF0054 M1F28_RS05480 PF02562 PhoH-like protein M1F28_RS05485 PF04452 RNA methyltransferase M1F28_RS05490 PF00226 DnaJ domain M1F28_RS05490 PF00684 DnaJ central domain M1F28_RS05490 PF01556 DnaJ C terminal domain M1F28_RS05495 PF01628 HrcA protein C terminal domain M1F28_RS05495 PF08220 DeoR-like helix-turn-helix domain M1F28_RS05510 PF04055 Radical SAM superfamily M1F28_RS05515 PF02390 Putative methyltransferase M1F28_RS05520 PF00679 Elongation factor G C-terminus M1F28_RS05520 PF00009 Elongation factor Tu GTP binding domain M1F28_RS05520 PF06421 GTP-binding protein LepA C-terminus M1F28_RS05545 PF01649 Ribosomal protein S20 M1F28_RS05555 PF02233 NAD(P) transhydrogenase beta subunit M1F28_RS05560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M1F28_RS05560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M1F28_RS05560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch M1F28_RS05580 PF05872 Bacterial protein of unknown function (DUF853) M1F28_RS05595 PF13603 Leucyl-tRNA synthetase, Domain 2 M1F28_RS05595 PF09334 tRNA synthetases class I (M) M1F28_RS05595 PF08264 Anticodon-binding domain of tRNA M1F28_RS05600 PF01230 HIT domain M1F28_RS05615 PF01594 AI-2E family transporter M1F28_RS05620 PF01048 Phosphorylase superfamily M1F28_RS05625 PF00950 ABC 3 transport family M1F28_RS05625 PF02742 Iron dependent repressor, metal binding and dimerisation domain M1F28_RS05630 PF00265 Thymidine kinase M1F28_RS05640 PF01022 Bacterial regulatory protein, arsR family M1F28_RS05650 PF01297 Zinc-uptake complex component A periplasmic M1F28_RS05660 PF00005 ABC transporter M1F28_RS05665 PF00950 ABC 3 transport family M1F28_RS05670 PF00294 pfkB family carbohydrate kinase M1F28_RS05685 PF01569 PAP2 superfamily M1F28_RS05705 PF00324 Amino acid permease M1F28_RS05710 PF05681 Fumarate hydratase (Fumerase) M1F28_RS05710 PF05683 Fumarase C-terminus M1F28_RS05715 PF00005 ABC transporter M1F28_RS05715 PF09383 NIL domain M1F28_RS05720 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS05725 PF03180 NLPA lipoprotein M1F28_RS05730 PF00324 Amino acid permease M1F28_RS05740 PF03591 AzlC protein M1F28_RS05745 PF07729 FCD domain M1F28_RS05745 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS05750 PF07690 Major Facilitator Superfamily M1F28_RS05755 PF01156 Inosine-uridine preferring nucleoside hydrolase M1F28_RS05760 PF16325 Peptidase family U32 C-terminal domain M1F28_RS05760 PF01136 Peptidase family U32 M1F28_RS05765 PF01174 SNO glutamine amidotransferase family M1F28_RS05770 PF01680 SOR/SNZ family M1F28_RS05775 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS05800 PF00746 LPXTG cell wall anchor motif M1F28_RS05800 PF16555 Gram-positive pilin subunit D1, N-terminal domain M1F28_RS05815 PF01522 Polysaccharide deacetylase M1F28_RS05825 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS05830 PF05025 RbsD / FucU transport protein family M1F28_RS05835 PF07690 Major Facilitator Superfamily M1F28_RS05840 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_RS05850 PF07882 L-fucose isomerase, second N-terminal domain M1F28_RS05850 PF07881 L-fucose isomerase, first N-terminal domain M1F28_RS05850 PF02952 L-fucose isomerase, C-terminal domain M1F28_RS05870 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_RS05885 PF01467 Cytidylyltransferase-like M1F28_RS05890 PF00085 Thioredoxin M1F28_RS05900 PF01926 50S ribosome-binding GTPase M1F28_RS05900 PF01018 GTP1/OBG M1F28_RS05900 PF09269 Domain of unknown function (DUF1967) M1F28_RS05905 PF01016 Ribosomal L27 protein M1F28_RS05910 PF00829 Ribosomal prokaryotic L21 protein M1F28_RS05915 PF10150 Ribonuclease E/G family M1F28_RS05920 PF01654 Cytochrome bd terminal oxidase subunit I M1F28_RS05925 PF02322 Cytochrome bd terminal oxidase subunit II M1F28_RS05930 PF00664 ABC transporter transmembrane region M1F28_RS05930 PF00005 ABC transporter M1F28_RS05935 PF00664 ABC transporter transmembrane region M1F28_RS05935 PF00005 ABC transporter M1F28_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS05940 PF07730 Histidine kinase M1F28_RS05940 PF13185 GAF domain M1F28_RS05945 PF00664 ABC transporter transmembrane region M1F28_RS05945 PF00005 ABC transporter M1F28_RS05950 PF00664 ABC transporter transmembrane region M1F28_RS05950 PF00005 ABC transporter M1F28_RS05955 PF10417 C-terminal domain of 1-Cys peroxiredoxin M1F28_RS05955 PF00578 AhpC/TSA family M1F28_RS05960 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS05960 PF13192 Thioredoxin domain M1F28_RS05965 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS05965 PF00072 Response regulator receiver domain M1F28_RS05970 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M1F28_RS05970 PF06827 Zinc finger found in FPG and IleRS M1F28_RS05970 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M1F28_RS05975 PF00035 Double-stranded RNA binding motif M1F28_RS05975 PF14622 Ribonuclease-III-like M1F28_RS05980 PF02620 Large ribosomal RNA subunit accumulation protein YceD M1F28_RS05990 PF01467 Cytidylyltransferase-like M1F28_RS06000 PF00270 DEAD/DEAH box helicase M1F28_RS06000 PF00271 Helicase conserved C-terminal domain M1F28_RS06000 PF17191 RecG wedge domain M1F28_RS06005 PF00830 Ribosomal L28 family M1F28_RS06015 PF00586 AIR synthase related protein, N-terminal domain M1F28_RS06015 PF02769 AIR synthase related protein, C-terminal domain M1F28_RS06020 PF03358 NADPH-dependent FMN reductase M1F28_RS06025 PF07478 D-ala D-ala ligase C-terminus M1F28_RS06025 PF01820 D-ala D-ala ligase N-terminus M1F28_RS06030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M1F28_RS06040 PF03577 Peptidase family C69 M1F28_RS06050 PF00534 Glycosyl transferases group 1 M1F28_RS06050 PF13439 Glycosyltransferase Family 4 M1F28_RS06060 PF06800 Sugar transport protein M1F28_RS06065 PF01432 Peptidase family M3 M1F28_RS06090 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS06100 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS06110 PF00749 tRNA synthetases class I (E and Q), catalytic domain M1F28_RS06115 PF00155 Aminotransferase class I and II M1F28_RS06120 PF01557 Fumarylacetoacetate (FAA) hydrolase family M1F28_RS06125 PF00501 AMP-binding enzyme M1F28_RS06135 PF00578 AhpC/TSA family M1F28_RS06150 PF01725 Ham1 family M1F28_RS06155 PF01138 3' exoribonuclease family, domain 1 M1F28_RS06155 PF03725 3' exoribonuclease family, domain 2 M1F28_RS06160 PF12706 Beta-lactamase superfamily domain M1F28_RS06165 PF01177 Asp/Glu/Hydantoin racemase M1F28_RS06175 PF02617 ATP-dependent Clp protease adaptor protein ClpS M1F28_RS06180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M1F28_RS06180 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M1F28_RS06185 PF04851 Type III restriction enzyme, res subunit M1F28_RS06195 PF00216 Bacterial DNA-binding protein M1F28_RS06200 PF06826 Predicted Permease Membrane Region M1F28_RS06200 PF02080 TrkA-C domain M1F28_RS06215 PF02540 NAD synthase M1F28_RS06230 PF06280 Fn3-like domain M1F28_RS06230 PF00746 LPXTG cell wall anchor motif M1F28_RS06230 PF02225 PA domain M1F28_RS06230 PF00082 Subtilase family M1F28_RS06240 PF00196 Bacterial regulatory proteins, luxR family M1F28_RS06240 PF00072 Response regulator receiver domain M1F28_RS06260 PF00005 ABC transporter M1F28_RS06260 PF12704 MacB-like periplasmic core domain M1F28_RS06260 PF02687 FtsX-like permease family M1F28_RS06265 PF00005 ABC transporter M1F28_RS06265 PF02687 FtsX-like permease family M1F28_RS06265 PF12704 MacB-like periplasmic core domain M1F28_RS06290 PF01047 MarR family M1F28_RS06295 PF00005 ABC transporter M1F28_RS06295 PF17755 UvrA DNA-binding domain M1F28_RS06295 PF17760 UvrA interaction domain M1F28_RS06300 PF00005 ABC transporter M1F28_RS06300 PF17755 UvrA DNA-binding domain M1F28_RS06300 PF17760 UvrA interaction domain M1F28_RS06325 PF17676 LD-carboxypeptidase C-terminal domain M1F28_RS06325 PF02016 LD-carboxypeptidase N-terminal domain M1F28_RS06330 PF13344 Haloacid dehalogenase-like hydrolase M1F28_RS06335 PF01668 SmpB protein M1F28_RS06340 PF04225 Opacity-associated protein A LysM-like domain M1F28_RS06340 PF01551 Peptidase family M23 M1F28_RS06345 PF02687 FtsX-like permease family M1F28_RS06345 PF18075 FtsX extracellular domain M1F28_RS06350 PF00005 ABC transporter M1F28_RS06355 PF03462 PCRF domain M1F28_RS06355 PF00472 RF-1 domain M1F28_RS06390 PF00437 Type II/IV secretion system protein M1F28_RS06400 PF00580 UvrD/REP helicase N-terminal domain M1F28_RS06400 PF13361 UvrD-like helicase C-terminal domain M1F28_RS06415 PF00270 DEAD/DEAH box helicase M1F28_RS06415 PF00271 Helicase conserved C-terminal domain M1F28_RS06420 PF01914 MarC family integral membrane protein M1F28_RS06430 PF05195 Aminopeptidase P, N-terminal domain M1F28_RS06430 PF00557 Metallopeptidase family M24 M1F28_RS06435 PF00571 CBS domain M1F28_RS06435 PF01769 Divalent cation transporter M1F28_RS06435 PF03448 MgtE intracellular N domain M1F28_RS06445 PF01883 Iron-sulfur cluster assembly protein M1F28_RS06445 PF10609 NUBPL iron-transfer P-loop NTPase M1F28_RS06450 PF01596 O-methyltransferase M1F28_RS06460 PF03641 Possible lysine decarboxylase M1F28_RS06465 PF01048 Phosphorylase superfamily M1F28_RS06470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_RS06470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_RS06470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_RS06470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_RS06475 PF00440 Bacterial regulatory proteins, tetR family M1F28_RS06480 PF07690 Major Facilitator Superfamily M1F28_RS06485 PF01791 DeoC/LacD family aldolase M1F28_RS06495 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M1F28_RS06495 PF00591 Glycosyl transferase family, a/b domain M1F28_RS06495 PF02885 Glycosyl transferase family, helical bundle domain M1F28_RS06500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M1F28_RS06505 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS06510 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS06515 PF00005 ABC transporter M1F28_RS06520 PF02608 ABC transporter substrate-binding protein PnrA-like M1F28_RS06525 PF01050 Mannose-6-phosphate isomerase M1F28_RS06525 PF00483 Nucleotidyl transferase M1F28_RS06540 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M1F28_RS06540 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M1F28_RS06545 PF00464 Serine hydroxymethyltransferase M1F28_RS06550 PF00551 Formyl transferase M1F28_RS06555 PF02632 BioY family M1F28_RS06560 PF01648 4'-phosphopantetheinyl transferase superfamily M1F28_RS06565 PF00698 Acyl transferase domain M1F28_RS06570 PF01039 Carboxyl transferase domain M1F28_RS06575 PF02785 Biotin carboxylase C-terminal domain M1F28_RS06575 PF00289 Biotin carboxylase, N-terminal domain M1F28_RS06575 PF00364 Biotin-requiring enzyme M1F28_RS06575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M1F28_RS06585 PF13088 BNR repeat-like domain M1F28_RS06585 PF00754 F5/8 type C domain M1F28_RS06585 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_RS06595 PF01494 FAD binding domain M1F28_RS06600 PF00766 Electron transfer flavoprotein FAD-binding domain M1F28_RS06600 PF01012 Electron transfer flavoprotein domain M1F28_RS06615 PF00753 Metallo-beta-lactamase superfamily M1F28_RS06620 PF00083 Sugar (and other) transporter M1F28_RS06625 PF01575 MaoC like domain M1F28_RS06630 PF13193 AMP-binding enzyme C-terminal domain M1F28_RS06630 PF00501 AMP-binding enzyme M1F28_RS06635 PF02515 CoA-transferase family III M1F28_RS06640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M1F28_RS06640 PF02770 Acyl-CoA dehydrogenase, middle domain M1F28_RS06640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M1F28_RS06645 PF07859 alpha/beta hydrolase fold M1F28_RS06665 PF00056 lactate/malate dehydrogenase, NAD binding domain M1F28_RS06665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M1F28_RS06675 PF00342 Phosphoglucose isomerase M1F28_RS06680 PF00365 Phosphofructokinase M1F28_RS06690 PF01808 AICARFT/IMPCHase bienzyme M1F28_RS06690 PF02142 MGS-like domain M1F28_RS06705 PF02629 CoA binding domain M1F28_RS06705 PF00549 CoA-ligase M1F28_RS06710 PF00549 CoA-ligase M1F28_RS06710 PF08442 ATP-grasp domain M1F28_RS06715 PF01757 Acyltransferase family M1F28_RS06720 PF13361 UvrD-like helicase C-terminal domain M1F28_RS06720 PF00580 UvrD/REP helicase N-terminal domain M1F28_RS06730 PF02810 SEC-C motif M1F28_RS06730 PF07517 SecA DEAD-like domain M1F28_RS06730 PF01043 SecA preprotein cross-linking domain M1F28_RS06730 PF07516 SecA Wing and Scaffold domain M1F28_RS06760 PF10431 C-terminal, D2-small domain, of ClpB protein M1F28_RS06760 PF02861 Clp amino terminal domain, pathogenicity island component M1F28_RS06760 PF17871 AAA lid domain M1F28_RS06760 PF00004 ATPase family associated with various cellular activities (AAA) M1F28_RS06760 PF07724 AAA domain (Cdc48 subfamily) M1F28_RS06785 PF00679 Elongation factor G C-terminus M1F28_RS06785 PF03764 Elongation factor G, domain IV M1F28_RS06785 PF00009 Elongation factor Tu GTP binding domain M1F28_RS06785 PF14492 Elongation Factor G, domain II M1F28_RS06805 PF00589 Phage integrase family M1F28_RS06805 PF02899 Phage integrase, N-terminal SAM-like domain M1F28_RS06820 PF00958 GMP synthase C terminal domain M1F28_RS06820 PF02540 NAD synthase M1F28_RS06820 PF00117 Glutamine amidotransferase class-I M1F28_RS06825 PF00849 RNA pseudouridylate synthase M1F28_RS06830 PF07085 DRTGG domain M1F28_RS06830 PF01515 Phosphate acetyl/butaryl transferase M1F28_RS06835 PF00871 Acetokinase family M1F28_RS06850 PF00005 ABC transporter M1F28_RS06860 PF00206 Lyase M1F28_RS06860 PF10415 Fumarase C C-terminus M1F28_RS06865 PF00478 IMP dehydrogenase / GMP reductase domain M1F28_RS06875 PF00478 IMP dehydrogenase / GMP reductase domain M1F28_RS06875 PF00571 CBS domain M1F28_RS06880 PF02467 Transcription factor WhiB M1F28_RS06890 PF00586 AIR synthase related protein, N-terminal domain M1F28_RS06890 PF02769 AIR synthase related protein, C-terminal domain M1F28_RS06890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M1F28_RS06895 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M1F28_RS06895 PF02844 Phosphoribosylglycinamide synthetase, N domain M1F28_RS06895 PF02843 Phosphoribosylglycinamide synthetase, C domain M1F28_RS06900 PF02769 AIR synthase related protein, C-terminal domain M1F28_RS06900 PF00586 AIR synthase related protein, N-terminal domain M1F28_RS06905 PF13537 Glutamine amidotransferase domain M1F28_RS06905 PF00156 Phosphoribosyl transferase domain M1F28_RS06910 PF01259 SAICAR synthetase M1F28_RS06915 PF00731 AIR carboxylase M1F28_RS06925 PF00166 Chaperonin 10 Kd subunit M1F28_RS06935 PF02535 ZIP Zinc transporter M1F28_RS06940 PF00814 Glycoprotease family M1F28_RS06945 PF00209 Sodium:neurotransmitter symporter family M1F28_RS06955 PF13085 2Fe-2S iron-sulfur cluster binding domain M1F28_RS06955 PF13183 4Fe-4S dicluster domain M1F28_RS06960 PF02910 Fumarate reductase flavoprotein C-term M1F28_RS06960 PF00890 FAD binding domain M1F28_RS06975 PF00814 Glycoprotease family M1F28_RS06985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M1F28_RS06990 PF01168 Alanine racemase, N-terminal domain M1F28_RS06990 PF00842 Alanine racemase, C-terminal domain M1F28_RS06995 PF01256 Carbohydrate kinase M1F28_RS06995 PF03853 YjeF-related protein N-terminus M1F28_RS07000 PF01380 SIS domain M1F28_RS07005 PF00485 Phosphoribulokinase / Uridine kinase family M1F28_RS07010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_RS07010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_RS07010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_RS07010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_RS07015 PF00380 Ribosomal protein S9/S16 M1F28_RS07020 PF00572 Ribosomal protein L13 M1F28_RS07030 PF07155 ECF-type riboflavin transporter, S component M1F28_RS07035 PF00005 ABC transporter M1F28_RS07035 PF12558 ATP-binding cassette cobalt transporter M1F28_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M1F28_RS07045 PF03466 LysR substrate binding domain M1F28_RS07055 PF01416 tRNA pseudouridine synthase M1F28_RS07060 PF00480 ROK family M1F28_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07075 PF00005 ABC transporter M1F28_RS07080 PF13411 MerR HTH family regulatory protein M1F28_RS07080 PF07739 TipAS antibiotic-recognition domain M1F28_RS07090 PF01196 Ribosomal protein L17 M1F28_RS07095 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M1F28_RS07095 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M1F28_RS07095 PF01000 RNA polymerase Rpb3/RpoA insert domain M1F28_RS07100 PF00411 Ribosomal protein S11 M1F28_RS07105 PF00416 Ribosomal protein S13/S18 M1F28_RS07110 PF00444 Ribosomal protein L36 M1F28_RS07115 PF01176 Translation initiation factor 1A / IF-1 M1F28_RS07120 PF00557 Metallopeptidase family M24 M1F28_RS07130 PF00344 SecY translocase M1F28_RS07135 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M1F28_RS07140 PF00327 Ribosomal protein L30p/L7e M1F28_RS07145 PF00333 Ribosomal protein S5, N-terminal domain M1F28_RS07145 PF03719 Ribosomal protein S5, C-terminal domain M1F28_RS07150 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M1F28_RS07155 PF00347 Ribosomal protein L6 M1F28_RS07160 PF00410 Ribosomal protein S8 M1F28_RS07165 PF00253 Ribosomal protein S14p/S29e M1F28_RS07170 PF00281 Ribosomal protein L5 M1F28_RS07170 PF00673 ribosomal L5P family C-terminus M1F28_RS07175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M1F28_RS07180 PF00238 Ribosomal protein L14p/L23e M1F28_RS07185 PF00366 Ribosomal protein S17 M1F28_RS07190 PF00831 Ribosomal L29 protein M1F28_RS07195 PF00252 Ribosomal protein L16p/L10e M1F28_RS07200 PF00189 Ribosomal protein S3, C-terminal domain M1F28_RS07200 PF07650 KH domain M1F28_RS07205 PF00237 Ribosomal protein L22p/L17e M1F28_RS07210 PF00203 Ribosomal protein S19 M1F28_RS07215 PF00181 Ribosomal Proteins L2, RNA binding domain M1F28_RS07215 PF03947 Ribosomal Proteins L2, C-terminal domain M1F28_RS07220 PF00276 Ribosomal protein L23 M1F28_RS07225 PF00573 Ribosomal protein L4/L1 family M1F28_RS07230 PF00297 Ribosomal protein L3 M1F28_RS07235 PF00338 Ribosomal protein S10p/S20e M1F28_RS07240 PF13419 Haloacid dehalogenase-like hydrolase M1F28_RS07245 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain M1F28_RS07245 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain M1F28_RS07250 PF03143 Elongation factor Tu C-terminal domain M1F28_RS07250 PF03144 Elongation factor Tu domain 2 M1F28_RS07250 PF00009 Elongation factor Tu GTP binding domain M1F28_RS07255 PF00679 Elongation factor G C-terminus M1F28_RS07255 PF14492 Elongation Factor G, domain II M1F28_RS07255 PF03764 Elongation factor G, domain IV M1F28_RS07255 PF00009 Elongation factor Tu GTP binding domain M1F28_RS07255 PF03144 Elongation factor Tu domain 2 M1F28_RS07260 PF00177 Ribosomal protein S7p/S5e M1F28_RS07265 PF00164 Ribosomal protein S12/S23 M1F28_RS07270 PF00324 Amino acid permease M1F28_RS07275 PF04998 RNA polymerase Rpb1, domain 5 M1F28_RS07275 PF05000 RNA polymerase Rpb1, domain 4 M1F28_RS07275 PF04983 RNA polymerase Rpb1, domain 3 M1F28_RS07275 PF00623 RNA polymerase Rpb1, domain 2 M1F28_RS07275 PF04997 RNA polymerase Rpb1, domain 1 M1F28_RS07280 PF00562 RNA polymerase Rpb2, domain 6 M1F28_RS07280 PF10385 RNA polymerase beta subunit external 1 domain M1F28_RS07280 PF04565 RNA polymerase Rpb2, domain 3 M1F28_RS07280 PF04561 RNA polymerase Rpb2, domain 2 M1F28_RS07280 PF04563 RNA polymerase beta subunit M1F28_RS07280 PF04560 RNA polymerase Rpb2, domain 7 M1F28_RS07285 PF00542 Ribosomal protein L7/L12 C-terminal domain M1F28_RS07285 PF16320 Ribosomal protein L7/L12 dimerisation domain M1F28_RS07290 PF00466 Ribosomal protein L10 M1F28_RS07295 PF00485 Phosphoribulokinase / Uridine kinase family M1F28_RS07300 PF00687 Ribosomal protein L1p/L10e family M1F28_RS07305 PF00298 Ribosomal protein L11, RNA binding domain M1F28_RS07305 PF03946 Ribosomal protein L11, N-terminal domain M1F28_RS07310 PF02357 Transcription termination factor nusG M1F28_RS07315 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M1F28_RS07325 PF00155 Aminotransferase class I and II M1F28_RS07335 PF00962 Adenosine/AMP deaminase M1F28_RS07350 PF01565 FAD binding domain M1F28_RS07350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M1F28_RS07365 PF00471 Ribosomal protein L33 M1F28_RS07385 PF04461 Protein of unknown function (DUF520) M1F28_RS07390 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS07395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M1F28_RS07395 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M1F28_RS07400 PF00156 Phosphoribosyl transferase domain M1F28_RS07405 PF10647 Lipoprotein LpqB beta-propeller domain M1F28_RS07405 PF10646 Sporulation and spore germination M1F28_RS07410 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS07410 PF00672 HAMP domain M1F28_RS07415 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS07415 PF00072 Response regulator receiver domain M1F28_RS07435 PF17863 AAA lid domain M1F28_RS07435 PF07726 ATPase family associated with various cellular activities (AAA) M1F28_RS07475 PF02467 Transcription factor WhiB M1F28_RS07480 PF00459 Inositol monophosphatase family M1F28_RS07490 PF01758 Sodium Bile acid symporter family M1F28_RS07495 PF00483 Nucleotidyl transferase M1F28_RS07500 PF04321 RmlD substrate binding domain M1F28_RS07520 PF00535 Glycosyl transferase family 2 M1F28_RS07530 PF00005 ABC transporter M1F28_RS07530 PF14524 Wzt C-terminal domain M1F28_RS07540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M1F28_RS07540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M1F28_RS07540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M1F28_RS07555 PF02350 UDP-N-acetylglucosamine 2-epimerase M1F28_RS07590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_RS07590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_RS07595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M1F28_RS07600 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_RS07615 PF16363 GDP-mannose 4,6 dehydratase M1F28_RS07625 PF00535 Glycosyl transferase family 2 M1F28_RS07625 PF00534 Glycosyl transferases group 1 M1F28_RS07630 PF03816 Cell envelope-related transcriptional attenuator domain M1F28_RS07635 PF03816 Cell envelope-related transcriptional attenuator domain M1F28_RS07645 PF00672 HAMP domain M1F28_RS07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS07645 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS07650 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS07650 PF00072 Response regulator receiver domain M1F28_RS07655 PF00211 Adenylate and Guanylate cyclase catalytic domain M1F28_RS07655 PF16701 Adenylate cyclase regulatory domain M1F28_RS07665 PF02545 Maf-like protein M1F28_RS07675 PF00285 Citrate synthase, C-terminal domain M1F28_RS07680 PF00155 Aminotransferase class I and II M1F28_RS07685 PF00037 4Fe-4S binding domain M1F28_RS07700 PF14492 Elongation Factor G, domain II M1F28_RS07700 PF00009 Elongation factor Tu GTP binding domain M1F28_RS07700 PF00679 Elongation factor G C-terminus M1F28_RS07700 PF03144 Elongation factor Tu domain 2 M1F28_RS07710 PF00664 ABC transporter transmembrane region M1F28_RS07710 PF00005 ABC transporter M1F28_RS07715 PF00005 ABC transporter M1F28_RS07715 PF00664 ABC transporter transmembrane region M1F28_RS07720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_RS07725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS07725 PF00005 ABC transporter M1F28_RS07730 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07740 PF03099 Biotin/lipoate A/B protein ligase family M1F28_RS07745 PF04055 Radical SAM superfamily M1F28_RS07750 PF00501 AMP-binding enzyme M1F28_RS07750 PF13193 AMP-binding enzyme C-terminal domain M1F28_RS07755 PF02127 Aminopeptidase I zinc metalloprotease (M18) M1F28_RS07770 PF03971 Monomeric isocitrate dehydrogenase M1F28_RS07775 PF04143 Sulphur transport M1F28_RS07780 PF01206 Sulfurtransferase TusA M1F28_RS07785 PF00128 Alpha amylase, catalytic domain M1F28_RS07790 PF13802 Galactose mutarotase-like M1F28_RS07790 PF01055 Glycosyl hydrolases family 31 M1F28_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07810 PF00480 ROK family M1F28_RS07835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS07835 PF00005 ABC transporter M1F28_RS07840 PF00005 ABC transporter M1F28_RS07840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07845 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_RS07850 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M1F28_RS07860 PF01226 Formate/nitrite transporter M1F28_RS07870 PF01327 Polypeptide deformylase M1F28_RS07875 PF01741 Large-conductance mechanosensitive channel, MscL M1F28_RS07900 PF00583 Acetyltransferase (GNAT) family M1F28_RS07900 PF01047 MarR family M1F28_RS07905 PF07972 NrdI Flavodoxin like M1F28_RS07910 PF00268 Ribonucleotide reductase, small chain M1F28_RS07915 PF03358 NADPH-dependent FMN reductase M1F28_RS07920 PF00440 Bacterial regulatory proteins, tetR family M1F28_RS07925 PF08946 Osmosensory transporter coiled coil M1F28_RS07925 PF00083 Sugar (and other) transporter M1F28_RS07940 PF00696 Amino acid kinase family M1F28_RS07945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M1F28_RS07945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M1F28_RS07955 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS07960 PF00128 Alpha amylase, catalytic domain M1F28_RS07960 PF16657 Maltogenic Amylase, C-terminal domain M1F28_RS07960 PF02903 Alpha amylase, N-terminal ig-like domain M1F28_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS07975 PF13416 Bacterial extracellular solute-binding protein M1F28_RS07980 PF00128 Alpha amylase, catalytic domain M1F28_RS07985 PF07690 Major Facilitator Superfamily M1F28_RS07990 PF01546 Peptidase family M20/M25/M40 M1F28_RS07990 PF07687 Peptidase dimerisation domain M1F28_RS07995 PF00083 Sugar (and other) transporter M1F28_RS07995 PF07690 Major Facilitator Superfamily M1F28_RS08030 PF06071 Protein of unknown function (DUF933) M1F28_RS08030 PF01926 50S ribosome-binding GTPase M1F28_RS08035 PF02646 RmuC family M1F28_RS08040 PF03193 RsgA GTPase M1F28_RS08055 PF00005 ABC transporter M1F28_RS08075 PF02401 LytB protein M1F28_RS08080 PF02601 Exonuclease VII, large subunit M1F28_RS08080 PF13742 OB-fold nucleic acid binding domain M1F28_RS08085 PF02609 Exonuclease VII small subunit M1F28_RS08090 PF00294 pfkB family carbohydrate kinase M1F28_RS08095 PF01255 Putative undecaprenyl diphosphate synthase M1F28_RS08100 PF03006 Haemolysin-III related M1F28_RS08105 PF02585 GlcNAc-PI de-N-acetylase M1F28_RS08110 PF01272 Transcription elongation factor, GreA/GreB, C-term M1F28_RS08110 PF03449 Transcription elongation factor, N-terminal M1F28_RS08115 PF01625 Peptide methionine sulfoxide reductase M1F28_RS08130 PF00474 Sodium:solute symporter family M1F28_RS08135 PF00171 Aldehyde dehydrogenase family M1F28_RS08150 PF00005 ABC transporter M1F28_RS08155 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS08165 PF00005 ABC transporter M1F28_RS08180 PF06965 Na+/H+ antiporter 1 M1F28_RS08185 PF02541 Ppx/GppA phosphatase family M1F28_RS08200 PF03952 Enolase, N-terminal domain M1F28_RS08200 PF00113 Enolase, C-terminal TIM barrel domain M1F28_RS08205 PF01156 Inosine-uridine preferring nucleoside hydrolase M1F28_RS08210 PF17757 UvrB interaction domain M1F28_RS08210 PF02559 CarD-like/TRCF domain M1F28_RS08210 PF00270 DEAD/DEAH box helicase M1F28_RS08210 PF03461 TRCF domain M1F28_RS08210 PF00271 Helicase conserved C-terminal domain M1F28_RS08215 PF01195 Peptidyl-tRNA hydrolase M1F28_RS08220 PF14693 Ribosomal protein TL5, C-terminal domain M1F28_RS08220 PF01386 Ribosomal L25p family M1F28_RS08225 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M1F28_RS08225 PF14572 Phosphoribosyl synthetase-associated domain M1F28_RS08230 PF12804 MobA-like NTP transferase domain M1F28_RS08230 PF00132 Bacterial transferase hexapeptide (six repeats) M1F28_RS08240 PF00440 Bacterial regulatory proteins, tetR family M1F28_RS08255 PF00005 ABC transporter M1F28_RS08255 PF13732 Domain of unknown function (DUF4162) M1F28_RS08270 PF12848 ABC transporter M1F28_RS08270 PF00005 ABC transporter M1F28_RS08270 PF16326 ABC transporter C-terminal domain M1F28_RS08275 PF00288 GHMP kinases N terminal domain M1F28_RS08275 PF08544 GHMP kinases C terminal M1F28_RS08280 PF00398 Ribosomal RNA adenine dimethylase M1F28_RS08290 PF01026 TatD related DNase M1F28_RS08295 PF09334 tRNA synthetases class I (M) M1F28_RS08300 PF00857 Isochorismatase family M1F28_RS08305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M1F28_RS08315 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase M1F28_RS08315 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M1F28_RS08320 PF01053 Cys/Met metabolism PLP-dependent enzyme M1F28_RS08340 PF13732 Domain of unknown function (DUF4162) M1F28_RS08340 PF00005 ABC transporter M1F28_RS08355 PF05175 Methyltransferase small domain M1F28_RS08365 PF01594 AI-2E family transporter M1F28_RS08380 PF01336 OB-fold nucleic acid binding domain M1F28_RS08380 PF09924 Uncharacterised conserved protein (DUF2156) M1F28_RS08380 PF00152 tRNA synthetases class II (D, K and N) M1F28_RS08380 PF16995 Transmembrane region of lysyl-tRNA synthetase M1F28_RS08385 PF02652 L-lactate permease M1F28_RS08390 PF02754 Cysteine-rich domain M1F28_RS08395 PF11870 Domain of unknown function (DUF3390) M1F28_RS08395 PF13183 4Fe-4S dicluster domain M1F28_RS08395 PF02589 LUD domain M1F28_RS08400 PF02589 LUD domain M1F28_RS08420 PF00381 PTS HPr component phosphorylation site M1F28_RS08425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M1F28_RS08430 PF00367 phosphotransferase system, EIIB M1F28_RS08430 PF02378 Phosphotransferase system, EIIC M1F28_RS08450 PF00293 NUDIX domain M1F28_RS08460 PF05524 PEP-utilising enzyme, N-terminal M1F28_RS08460 PF00391 PEP-utilising enzyme, mobile domain M1F28_RS08460 PF02896 PEP-utilising enzyme, TIM barrel domain M1F28_RS08470 PF00874 PRD domain M1F28_RS08470 PF03123 CAT RNA binding domain M1F28_RS08475 PF00367 phosphotransferase system, EIIB M1F28_RS08475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M1F28_RS08475 PF02378 Phosphotransferase system, EIIC M1F28_RS08490 PF00005 ABC transporter M1F28_RS08490 PF00027 Cyclic nucleotide-binding domain M1F28_RS08495 PF05167 Uncharacterised ACR (DUF711) M1F28_RS08505 PF07690 Major Facilitator Superfamily M1F28_RS08515 PF00444 Ribosomal protein L36 M1F28_RS08520 PF01197 Ribosomal protein L31 M1F28_RS08525 PF00253 Ribosomal protein S14p/S29e M1F28_RS08530 PF00471 Ribosomal protein L33 M1F28_RS08535 PF00830 Ribosomal L28 family M1F28_RS08550 PF00083 Sugar (and other) transporter M1F28_RS08555 PF07859 alpha/beta hydrolase fold M1F28_RS08560 PF00392 Bacterial regulatory proteins, gntR family M1F28_RS08560 PF07702 UTRA domain M1F28_RS08565 PF00005 ABC transporter M1F28_RS08570 PF01032 FecCD transport family M1F28_RS08575 PF01032 FecCD transport family M1F28_RS08580 PF01497 Periplasmic binding protein M1F28_RS08595 PF12697 Alpha/beta hydrolase family M1F28_RS08610 PF05973 Phage derived protein Gp49-like (DUF891) M1F28_RS08615 PF01381 Helix-turn-helix M1F28_RS08640 PF00994 Probable molybdopterin binding domain M1F28_RS08640 PF03453 MoeA N-terminal region (domain I and II) M1F28_RS08640 PF03454 MoeA C-terminal region (domain IV) M1F28_RS08675 PF00582 Universal stress protein family M1F28_RS08680 PF01476 LysM domain M1F28_RS08680 PF00877 NlpC/P60 family M1F28_RS08685 PF18357 Diphteria toxin repressor SH3 domain M1F28_RS08685 PF02742 Iron dependent repressor, metal binding and dimerisation domain M1F28_RS08685 PF01325 Iron dependent repressor, N-terminal DNA binding domain M1F28_RS08690 PF00266 Aminotransferase class-V M1F28_RS08695 PF00860 Permease family M1F28_RS08700 PF01238 Phosphomannose isomerase type I M1F28_RS08705 PF11228 Protein of unknown function (DUF3027) M1F28_RS08710 PF00313 'Cold-shock' DNA-binding domain M1F28_RS08720 PF04012 PspA/IM30 family M1F28_RS08730 PF00072 Response regulator receiver domain M1F28_RS08730 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS08735 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS08735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS08735 PF00672 HAMP domain M1F28_RS08740 PF01553 Acyltransferase M1F28_RS08740 PF00501 AMP-binding enzyme M1F28_RS08745 PF00106 short chain dehydrogenase M1F28_RS08760 PF00118 TCP-1/cpn60 chaperonin family M1F28_RS08775 PF03167 Uracil DNA glycosylase superfamily M1F28_RS08805 PF00069 Protein kinase domain M1F28_RS08805 PF00400 WD domain, G-beta repeat M1F28_RS08810 PF00005 ABC transporter M1F28_RS08810 PF17912 MalK OB fold domain M1F28_RS08820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_RS08820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_RS08830 PF01547 Bacterial extracellular solute-binding protein M1F28_RS08835 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS08840 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS08855 PF01118 Semialdehyde dehydrogenase, NAD binding domain M1F28_RS08855 PF02774 Semialdehyde dehydrogenase, dimerisation domain M1F28_RS08860 PF00696 Amino acid kinase family M1F28_RS08860 PF01842 ACT domain M1F28_RS08860 PF13840 ACT domain M1F28_RS08865 PF02132 RecR protein M1F28_RS08865 PF13662 Toprim domain M1F28_RS08870 PF12169 DNA polymerase III subunits gamma and tau domain III M1F28_RS08880 PF02554 Carbon starvation protein CstA M1F28_RS08880 PF13722 5TM C-terminal transporter carbon starvation CstA M1F28_RS08905 PF00860 Permease family M1F28_RS08920 PF00588 SpoU rRNA Methylase family M1F28_RS08920 PF08032 RNA 2'-O ribose methyltransferase substrate binding M1F28_RS08925 PF09190 DALR domain M1F28_RS08925 PF01406 tRNA synthetases class I (C) catalytic domain M1F28_RS08935 PF00005 ABC transporter M1F28_RS08940 PF04198 Putative sugar-binding domain M1F28_RS08950 PF02733 Dak1 domain M1F28_RS08960 PF00596 Class II Aldolase and Adducin N-terminal domain M1F28_RS08965 PF03611 PTS system sugar-specific permease component M1F28_RS08995 PF02542 YgbB family M1F28_RS09000 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M1F28_RS09005 PF02559 CarD-like/TRCF domain M1F28_RS09010 PF00072 Response regulator receiver domain M1F28_RS09010 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS09015 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS09020 PF01895 PhoU domain M1F28_RS09025 PF00300 Histidine phosphatase superfamily (branch 1) M1F28_RS09040 PF16555 Gram-positive pilin subunit D1, N-terminal domain M1F28_RS09040 PF00746 LPXTG cell wall anchor motif M1F28_RS09070 PF00005 ABC transporter M1F28_RS09075 PF01032 FecCD transport family M1F28_RS09085 PF00884 Sulfatase M1F28_RS09090 PF00884 Sulfatase M1F28_RS09100 PF01066 CDP-alcohol phosphatidyltransferase M1F28_RS09105 PF00762 Ferrochelatase M1F28_RS09110 PF00248 Aldo/keto reductase family M1F28_RS09120 PF01487 Type I 3-dehydroquinase M1F28_RS09150 PF17863 AAA lid domain M1F28_RS09150 PF07726 ATPase family associated with various cellular activities (AAA) M1F28_RS09160 PF14256 YwiC-like protein M1F28_RS09165 PF00155 Aminotransferase class I and II M1F28_RS09170 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M1F28_RS09175 PF08328 Adenylosuccinate lyase C-terminal M1F28_RS09175 PF00206 Lyase M1F28_RS09180 PF09335 SNARE associated Golgi protein M1F28_RS09190 PF00403 Heavy-metal-associated domain M1F28_RS09190 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS09190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M1F28_RS09195 PF00403 Heavy-metal-associated domain M1F28_RS09205 PF00754 F5/8 type C domain M1F28_RS09205 PF13088 BNR repeat-like domain M1F28_RS09205 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase M1F28_RS09210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M1F28_RS09210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M1F28_RS09210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M1F28_RS09210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M1F28_RS09215 PF01497 Periplasmic binding protein M1F28_RS09220 PF01032 FecCD transport family M1F28_RS09225 PF01032 FecCD transport family M1F28_RS09230 PF00005 ABC transporter M1F28_RS09245 PF00107 Zinc-binding dehydrogenase M1F28_RS09245 PF08240 Alcohol dehydrogenase GroES-like domain M1F28_RS09250 PF00356 Bacterial regulatory proteins, lacI family M1F28_RS09255 PF07690 Major Facilitator Superfamily M1F28_RS09260 PF00459 Inositol monophosphatase family M1F28_RS09265 PF13407 Periplasmic binding protein domain M1F28_RS09270 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS09275 PF00005 ABC transporter M1F28_RS09280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_RS09280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_RS09285 PF01261 Xylose isomerase-like TIM barrel M1F28_RS09290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M1F28_RS09290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M1F28_RS09295 PF00923 Transaldolase/Fructose-6-phosphate aldolase M1F28_RS09305 PF00294 pfkB family carbohydrate kinase M1F28_RS09315 PF04962 KduI/IolB family M1F28_RS09320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M1F28_RS09320 PF00205 Thiamine pyrophosphate enzyme, central domain M1F28_RS09320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M1F28_RS09325 PF00171 Aldehyde dehydrogenase family M1F28_RS09330 PF00005 ABC transporter M1F28_RS09335 PF01032 FecCD transport family M1F28_RS09340 PF01032 FecCD transport family M1F28_RS09345 PF01497 Periplasmic binding protein M1F28_RS09350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M1F28_RS09350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M1F28_RS09355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M1F28_RS09360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M1F28_RS09360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M1F28_RS09365 PF03480 Bacterial extracellular solute-binding protein, family 7 M1F28_RS09370 PF02614 Glucuronate isomerase M1F28_RS09385 PF03932 CutC family M1F28_RS09400 PF00480 ROK family M1F28_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS09415 PF12911 N-terminal TM domain of oligopeptide transport permease C M1F28_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS09420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M1F28_RS09420 PF00005 ABC transporter M1F28_RS09425 PF00480 ROK family M1F28_RS09430 PF00480 ROK family M1F28_RS09440 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS09445 PF00528 Binding-protein-dependent transport system inner membrane component M1F28_RS09450 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain M1F28_RS09450 PF17386 Lacto-N-biose phosphorylase C-terminal domain M1F28_RS09450 PF17385 Lacto-N-biose phosphorylase central domain M1F28_RS09455 PF01636 Phosphotransferase enzyme family M1F28_RS09460 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M1F28_RS09460 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M1F28_RS09470 PF00005 ABC transporter M1F28_RS09475 PF00664 ABC transporter transmembrane region M1F28_RS09475 PF00005 ABC transporter M1F28_RS09475 PF08021 Siderophore-interacting FAD-binding domain M1F28_RS09475 PF04954 Siderophore-interacting protein M1F28_RS09480 PF00005 ABC transporter M1F28_RS09485 PF02361 Cobalt transport protein M1F28_RS09500 PF00939 Sodium:sulfate symporter transmembrane region M1F28_RS09510 PF13610 DDE domain M1F28_RS09515 PF00239 Resolvase, N terminal domain M1F28_RS09515 PF02796 Helix-turn-helix domain of resolvase M1F28_RS09520 PF00398 Ribosomal RNA adenine dimethylase M1F28_RS09525 PF13610 DDE domain M1F28_RS09535 PF01909 Nucleotidyltransferase domain M1F28_RS09535 PF13427 Domain of unknown function (DUF4111) M1F28_RS09540 PF00893 Small Multidrug Resistance protein M1F28_RS09545 PF00809 Pterin binding enzyme M1F28_RS09555 PF07690 Major Facilitator Superfamily M1F28_RS09560 PF00665 Integrase core domain M1F28_RS09565 PF13610 DDE domain M1F28_RS09585 PF01113 Dihydrodipicolinate reductase, N-terminus M1F28_RS09585 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain M1F28_RS09590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M1F28_RS09590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M1F28_RS09595 PF00005 ABC transporter M1F28_RS09600 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS09605 PF02653 Branched-chain amino acid transport system / permease component M1F28_RS09610 PF13407 Periplasmic binding protein domain M1F28_RS09615 PF04198 Putative sugar-binding domain M1F28_RS09620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M1F28_RS09620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M1F28_RS09630 PF01791 DeoC/LacD family aldolase M1F28_RS09635 PF01695 IstB-like ATP binding protein M1F28_RS09645 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS09650 PF01661 Macro domain M1F28_RS09665 PF01867 CRISPR associated protein Cas1 M1F28_RS09670 PF18019 HD domain M1F28_RS09670 PF18395 Cas3 C-terminal domain M1F28_RS09705 PF13635 Domain of unknown function (DUF4143) M1F28_RS09705 PF13173 AAA domain M1F28_RS09710 PF05958 tRNA (Uracil-5-)-methyltransferase M1F28_RS09725 PF00270 DEAD/DEAH box helicase M1F28_RS09725 PF04408 Helicase associated domain (HA2) M1F28_RS09725 PF08482 ATP-dependent helicase C-terminal M1F28_RS09725 PF00271 Helicase conserved C-terminal domain M1F28_RS09740 PF02386 Cation transport protein M1F28_RS09770 PF12704 MacB-like periplasmic core domain M1F28_RS09770 PF00005 ABC transporter M1F28_RS09770 PF02687 FtsX-like permease family M1F28_RS09775 PF00005 ABC transporter M1F28_RS09790 PF00072 Response regulator receiver domain M1F28_RS09790 PF00486 Transcriptional regulatory protein, C terminal M1F28_RS09795 PF00512 His Kinase A (phospho-acceptor) domain M1F28_RS09795 PF00672 HAMP domain M1F28_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M1F28_RS09800 PF01702 Queuine tRNA-ribosyltransferase M1F28_RS09810 PF01712 Deoxynucleoside kinase M1F28_RS09830 PF00291 Pyridoxal-phosphate dependent enzyme M1F28_RS09830 PF00585 C-terminal regulatory domain of Threonine dehydratase M1F28_RS09845 PF00561 alpha/beta hydrolase fold M1F28_RS09850 PF00248 Aldo/keto reductase family M1F28_RS09855 PF08543 Phosphomethylpyrimidine kinase M1F28_RS09865 PF00899 ThiF family M1F28_RS09875 PF07690 Major Facilitator Superfamily M1F28_RS09880 PF03796 DnaB-like helicase C terminal domain M1F28_RS09880 PF00772 DnaB-like helicase N terminal domain M1F28_RS09905 PF03948 Ribosomal protein L9, C-terminal domain M1F28_RS09905 PF01281 Ribosomal protein L9, N-terminal domain M1F28_RS09910 PF01084 Ribosomal protein S18 M1F28_RS09915 PF00436 Single-strand binding protein family M1F28_RS09920 PF01250 Ribosomal protein S6 M1F28_RS09925 PF00912 Transglycosylase M1F28_RS09925 PF00905 Penicillin binding protein transpeptidase domain M1F28_RS09930 PF01594 AI-2E family transporter M1F28_RS09935 PF07690 Major Facilitator Superfamily M1F28_RS09940 PF01743 Poly A polymerase head domain M1F28_RS09940 PF12627 Probable RNA and SrmB- binding site of polymerase A M1F28_RS09940 PF13735 tRNA nucleotidyltransferase domain 2 putative M1F28_RS09945 PF00293 NUDIX domain M1F28_RS09960 PF07992 Pyridine nucleotide-disulphide oxidoreductase M1F28_RS09965 PF00155 Aminotransferase class I and II M1F28_RS09970 PF01820 D-ala D-ala ligase N-terminus M1F28_RS09970 PF07478 D-ala D-ala ligase C-terminus M1F28_RS09975 PF17762 HTH domain found in ParB protein M1F28_RS09975 PF02195 ParB-like nuclease domain M1F28_RS09980 PF13614 AAA domain M1F28_RS09985 PF02527 rRNA small subunit methyltransferase G M1F28_RS09995 PF02096 60Kd inner membrane protein M1F28_RS10000 PF01809 Putative membrane protein insertion efficiency factor M1F28_RS10005 PF00825 Ribonuclease P M1F28_RS10010 PF00468 Ribosomal protein L34