locus-tag class description DDE06_RS00005 PF02562 PhoH-like protein DDE06_RS00010 PF02130 Uncharacterized protein family UPF0054 DDE06_RS00015 PF00571 CBS domain DDE06_RS00015 PF03471 Transporter associated domain DDE06_RS00015 PF01595 Cyclin M transmembrane N-terminal domain DDE06_RS00020 PF01926 50S ribosome-binding GTPase DDE06_RS00020 PF07650 KH domain DDE06_RS00040 PF00069 Protein kinase domain DDE06_RS00040 PF13191 AAA ATPase domain DDE06_RS00045 PF08502 LeuA allosteric (dimerisation) domain DDE06_RS00045 PF00682 HMGL-like DDE06_RS00050 PF11967 Recombination protein O N terminal DDE06_RS00050 PF02565 Recombination protein O C terminal DDE06_RS00055 PF01255 Putative undecaprenyl diphosphate synthase DDE06_RS00060 PF00815 Histidinol dehydrogenase DDE06_RS00065 PF00155 Aminotransferase class I and II DDE06_RS00070 PF00475 Imidazoleglycerol-phosphate dehydratase DDE06_RS00080 PF00117 Glutamine amidotransferase class-I DDE06_RS00085 PF00977 Histidine biosynthesis protein DDE06_RS00095 PF00707 Translation initiation factor IF-3, C-terminal domain DDE06_RS00095 PF05198 Translation initiation factor IF-3, N-terminal domain DDE06_RS00100 PF01632 Ribosomal protein L35 DDE06_RS00105 PF00453 Ribosomal protein L20 DDE06_RS00115 PF08032 RNA 2'-O ribose methyltransferase substrate binding DDE06_RS00115 PF00588 SpoU rRNA Methylase family DDE06_RS00120 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DDE06_RS00125 PF01409 tRNA synthetases class II core domain (F) DDE06_RS00125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DDE06_RS00130 PF03484 tRNA synthetase B5 domain DDE06_RS00130 PF01588 Putative tRNA binding domain DDE06_RS00130 PF03483 B3/4 domain DDE06_RS00130 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DDE06_RS00130 PF03147 Ferredoxin-fold anticodon binding domain DDE06_RS00135 PF04073 Aminoacyl-tRNA editing domain DDE06_RS00140 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DDE06_RS00140 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DDE06_RS00150 PF00202 Aminotransferase class-III DDE06_RS00155 PF01316 Arginine repressor, DNA binding domain DDE06_RS00155 PF02863 Arginine repressor, C-terminal domain DDE06_RS00160 PF16363 GDP-mannose 4,6 dehydratase DDE06_RS00170 PF01381 Helix-turn-helix DDE06_RS00180 PF00005 ABC transporter DDE06_RS00185 PF00579 tRNA synthetases class I (W and Y) DDE06_RS00190 PF01297 Zinc-uptake complex component A periplasmic DDE06_RS00195 PF00005 ABC transporter DDE06_RS00200 PF00950 ABC 3 transport family DDE06_RS00205 PF00950 ABC 3 transport family DDE06_RS00235 PF18407 GCN5-related N-acetyltransferase like domain DDE06_RS00235 PF13344 Haloacid dehalogenase-like hydrolase DDE06_RS00240 PF01728 FtsJ-like methyltransferase DDE06_RS00240 PF01479 S4 domain DDE06_RS00245 PF01513 ATP-NAD kinase DDE06_RS00250 PF02463 RecF/RecN/SMC N terminal domain DDE06_RS00270 PF03023 Lipid II flippase MurJ DDE06_RS00285 PF01458 Uncharacterized protein family (UPF0051) DDE06_RS00290 PF01458 Uncharacterized protein family (UPF0051) DDE06_RS00295 PF00355 Rieske [2Fe-2S] domain DDE06_RS00300 PF00005 ABC transporter DDE06_RS00305 PF00266 Aminotransferase class-V DDE06_RS00315 PF01883 Iron-sulfur cluster assembly protein DDE06_RS00320 PF00581 Rhodanese-like domain DDE06_RS00325 PF00005 ABC transporter DDE06_RS00325 PF12848 ABC transporter DDE06_RS00330 PF00300 Histidine phosphatase superfamily (branch 1) DDE06_RS00345 PF00005 ABC transporter DDE06_RS00350 PF00483 Nucleotidyl transferase DDE06_RS00355 PF13439 Glycosyltransferase Family 4 DDE06_RS00355 PF00534 Glycosyl transferases group 1 DDE06_RS00360 PF00005 ABC transporter DDE06_RS00370 PF01145 SPFH domain / Band 7 family DDE06_RS00375 PF00588 SpoU rRNA Methylase family DDE06_RS00390 PF00588 SpoU rRNA Methylase family DDE06_RS00395 PF01161 Phosphatidylethanolamine-binding protein DDE06_RS00410 PF14579 Helix-hairpin-helix motif DDE06_RS00410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DDE06_RS00410 PF07733 Bacterial DNA polymerase III alpha NTPase domain DDE06_RS00410 PF01336 OB-fold nucleic acid binding domain DDE06_RS00410 PF02811 PHP domain DDE06_RS00430 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DDE06_RS00430 PF08501 Shikimate dehydrogenase substrate binding domain DDE06_RS00435 PF00958 GMP synthase C terminal domain DDE06_RS00435 PF00117 Glutamine amidotransferase class-I DDE06_RS00435 PF02540 NAD synthase DDE06_RS00440 PF04107 Glutamate-cysteine ligase family 2(GCS2) DDE06_RS00445 PF07687 Peptidase dimerisation domain DDE06_RS00445 PF01546 Peptidase family M20/M25/M40 DDE06_RS00460 PF02673 Bacitracin resistance protein BacA DDE06_RS00465 PF13419 Haloacid dehalogenase-like hydrolase DDE06_RS00475 PF08704 tRNA methyltransferase complex GCD14 subunit DDE06_RS00480 PF17758 Proteasomal ATPase OB N-terminal domain DDE06_RS00480 PF00004 ATPase family associated with various cellular activities (AAA) DDE06_RS00480 PF16450 Proteasomal ATPase OB C-terminal domain DDE06_RS00485 PF03136 Pup-ligase protein DDE06_RS00490 PF05639 Pup-like protein DDE06_RS00495 PF03136 Pup-ligase protein DDE06_RS00510 PF00977 Histidine biosynthesis protein DDE06_RS00515 PF01502 Phosphoribosyl-AMP cyclohydrolase DDE06_RS00520 PF00218 Indole-3-glycerol phosphate synthase DDE06_RS00525 PF01790 Prolipoprotein diacylglyceryl transferase DDE06_RS00530 PF00224 Pyruvate kinase, barrel domain DDE06_RS00530 PF02887 Pyruvate kinase, alpha/beta domain DDE06_RS00540 PF03861 ANTAR domain DDE06_RS00540 PF00072 Response regulator receiver domain DDE06_RS00550 PF00476 DNA polymerase family A DDE06_RS00550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DDE06_RS00550 PF01367 5'-3' exonuclease, C-terminal SAM fold DDE06_RS00555 PF00575 S1 RNA binding domain DDE06_RS00565 PF00005 ABC transporter DDE06_RS00570 PF01470 Pyroglutamyl peptidase DDE06_RS00575 PF01121 Dephospho-CoA kinase DDE06_RS00580 PF00271 Helicase conserved C-terminal domain DDE06_RS00580 PF12344 Ultra-violet resistance protein B DDE06_RS00580 PF04851 Type III restriction enzyme, res subunit DDE06_RS00580 PF17757 UvrB interaction domain DDE06_RS00580 PF02151 UvrB/uvrC motif DDE06_RS00585 PF03741 Integral membrane protein TerC family DDE06_RS00590 PF13593 SBF-like CPA transporter family (DUF4137) DDE06_RS00600 PF17755 UvrA DNA-binding domain DDE06_RS00600 PF00005 ABC transporter DDE06_RS00600 PF17760 UvrA interaction domain DDE06_RS00605 PF02151 UvrB/uvrC motif DDE06_RS00605 PF08459 UvrC Helix-hairpin-helix N-terminal DDE06_RS00605 PF01541 GIY-YIG catalytic domain DDE06_RS00610 PF03668 P-loop ATPase protein family DDE06_RS00615 PF01933 Uncharacterised protein family UPF0052 DDE06_RS00620 PF02650 WhiA C-terminal HTH domain DDE06_RS00620 PF14527 WhiA LAGLIDADG-like domain DDE06_RS00620 PF10298 WhiA N-terminal LAGLIDADG-like domain DDE06_RS00625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DDE06_RS00625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DDE06_RS00630 PF00162 Phosphoglycerate kinase DDE06_RS00635 PF00121 Triosephosphate isomerase DDE06_RS00640 PF03840 Preprotein translocase SecG subunit DDE06_RS00650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DDE06_RS00650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DDE06_RS00655 PF00923 Transaldolase/Fructose-6-phosphate aldolase DDE06_RS00660 PF00456 Transketolase, thiamine diphosphate binding domain DDE06_RS00660 PF02780 Transketolase, C-terminal domain DDE06_RS00660 PF02779 Transketolase, pyrimidine binding domain DDE06_RS00665 PF00589 Phage integrase family DDE06_RS00665 PF02899 Phage integrase, N-terminal SAM-like domain DDE06_RS00670 PF13614 AAA domain DDE06_RS00675 PF02616 Segregation and condensation protein ScpA DDE06_RS00680 PF04079 Segregation and condensation complex subunit ScpB DDE06_RS00685 PF01479 S4 domain DDE06_RS00685 PF00849 RNA pseudouridylate synthase DDE06_RS00695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DDE06_RS00695 PF01926 50S ribosome-binding GTPase DDE06_RS00700 PF00365 Phosphofructokinase DDE06_RS00715 PF01433 Peptidase family M1 domain DDE06_RS00715 PF11838 ERAP1-like C-terminal domain DDE06_RS00720 PF00498 FHA domain DDE06_RS00730 PF13411 MerR HTH family regulatory protein DDE06_RS00740 PF13397 RNA polymerase-binding protein DDE06_RS00745 PF00535 Glycosyl transferase family 2 DDE06_RS00750 PF00795 Carbon-nitrogen hydrolase DDE06_RS00750 PF00535 Glycosyl transferase family 2 DDE06_RS00755 PF00270 DEAD/DEAH box helicase DDE06_RS00755 PF08148 DSHCT (NUC185) domain DDE06_RS00755 PF00271 Helicase conserved C-terminal domain DDE06_RS00760 PF00781 Diacylglycerol kinase catalytic domain DDE06_RS00785 PF08029 HisG, C-terminal domain DDE06_RS00785 PF01634 ATP phosphoribosyltransferase DDE06_RS00790 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DDE06_RS00795 PF09084 NMT1/THI5 like DDE06_RS00800 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS00805 PF00834 Ribulose-phosphate 3 epimerase family DDE06_RS00810 PF01189 16S rRNA methyltransferase RsmB/F DDE06_RS00810 PF01029 NusB family DDE06_RS00815 PF00551 Formyl transferase DDE06_RS00815 PF02911 Formyl transferase, C-terminal domain DDE06_RS00820 PF17764 3′ DNA-binding domain (3′BD) DDE06_RS00825 PF00438 S-adenosylmethionine synthetase, N-terminal domain DDE06_RS00825 PF02773 S-adenosylmethionine synthetase, C-terminal domain DDE06_RS00825 PF02772 S-adenosylmethionine synthetase, central domain DDE06_RS00830 PF04127 DNA / pantothenate metabolism flavoprotein DDE06_RS00830 PF02441 Flavoprotein DDE06_RS00835 PF01192 RNA polymerase Rpb6 DDE06_RS00840 PF00625 Guanylate kinase DDE06_RS00850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DDE06_RS00850 PF02142 MGS-like domain DDE06_RS00850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DDE06_RS00855 PF00117 Glutamine amidotransferase class-I DDE06_RS00855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DDE06_RS00860 PF01029 NusB family DDE06_RS00865 PF09285 Elongation factor P, C-terminal DDE06_RS00865 PF01132 Elongation factor P (EF-P) OB domain DDE06_RS00865 PF08207 Elongation factor P (EF-P) KOW-like domain DDE06_RS00870 PF00403 Heavy-metal-associated domain DDE06_RS00875 PF01202 Shikimate kinase DDE06_RS00880 PF01202 Shikimate kinase DDE06_RS00880 PF01761 3-dehydroquinate synthase DDE06_RS00885 PF01264 Chorismate synthase DDE06_RS00905 PF03652 Holliday junction resolvase DDE06_RS00910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DDE06_RS00910 PF01411 tRNA synthetases class II (A) DDE06_RS00910 PF02272 DHHA1 domain DDE06_RS00920 PF01479 S4 domain DDE06_RS00920 PF00163 Ribosomal protein S4/S9 N-terminal domain DDE06_RS00925 PF16193 AAA C-terminal domain DDE06_RS00925 PF12002 MgsA AAA+ ATPase C terminal DDE06_RS00925 PF00004 ATPase family associated with various cellular activities (AAA) DDE06_RS00930 PF03176 MMPL family DDE06_RS00945 PF02938 GAD domain DDE06_RS00945 PF00152 tRNA synthetases class II (D, K and N) DDE06_RS00945 PF01336 OB-fold nucleic acid binding domain DDE06_RS00955 PF00270 DEAD/DEAH box helicase DDE06_RS00955 PF03880 DbpA RNA binding domain DDE06_RS00955 PF00271 Helicase conserved C-terminal domain DDE06_RS00965 PF07650 KH domain DDE06_RS00965 PF01926 50S ribosome-binding GTPase DDE06_RS00970 PF01926 50S ribosome-binding GTPase DDE06_RS00970 PF07650 KH domain DDE06_RS00975 PF03129 Anticodon binding domain DDE06_RS00975 PF13393 Histidyl-tRNA synthetase DDE06_RS00980 PF00753 Metallo-beta-lactamase superfamily DDE06_RS00985 PF03993 Domain of Unknown Function (DUF349) DDE06_RS00995 PF13291 ACT domain DDE06_RS00995 PF04607 Region found in RelA / SpoT proteins DDE06_RS00995 PF02824 TGS domain DDE06_RS01000 PF00156 Phosphoribosyl transferase domain DDE06_RS01005 PF07549 SecD/SecF GG Motif DDE06_RS01005 PF02355 Protein export membrane protein DDE06_RS01010 PF07549 SecD/SecF GG Motif DDE06_RS01010 PF02355 Protein export membrane protein DDE06_RS01020 PF05496 Holliday junction DNA helicase RuvB P-loop domain DDE06_RS01020 PF05491 RuvB C-terminal winged helix domain DDE06_RS01020 PF17864 RuvB AAA lid domain DDE06_RS01025 PF01330 RuvA N terminal domain DDE06_RS01025 PF07499 RuvA, C-terminal domain DDE06_RS01030 PF02075 Crossover junction endodeoxyribonuclease RuvC DDE06_RS01035 PF01709 Transcriptional regulator DDE06_RS01040 PF00293 NUDIX domain DDE06_RS01050 PF13439 Glycosyltransferase Family 4 DDE06_RS01060 PF01066 CDP-alcohol phosphatidyltransferase DDE06_RS01065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DDE06_RS01065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DDE06_RS01065 PF03129 Anticodon binding domain DDE06_RS01070 PF03313 Serine dehydratase alpha chain DDE06_RS01070 PF03315 Serine dehydratase beta chain DDE06_RS01075 PF00196 Bacterial regulatory proteins, luxR family DDE06_RS01075 PF00072 Response regulator receiver domain DDE06_RS01095 PF00082 Subtilase family DDE06_RS01095 PF05922 Peptidase inhibitor I9 DDE06_RS01120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DDE06_RS01120 PF00128 Alpha amylase, catalytic domain DDE06_RS01125 PF00128 Alpha amylase, catalytic domain DDE06_RS01130 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DDE06_RS01130 PF00128 Alpha amylase, catalytic domain DDE06_RS01145 PF02780 Transketolase, C-terminal domain DDE06_RS01145 PF02779 Transketolase, pyrimidine binding domain DDE06_RS01145 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DDE06_RS01155 PF00694 Aconitase C-terminal domain DDE06_RS01155 PF00330 Aconitase family (aconitate hydratase) DDE06_RS01160 PF05958 tRNA (Uracil-5-)-methyltransferase DDE06_RS01170 PF02080 TrkA-C domain DDE06_RS01170 PF02254 TrkA-N domain DDE06_RS01175 PF02080 TrkA-C domain DDE06_RS01175 PF02254 TrkA-N domain DDE06_RS01215 PF03989 DNA gyrase C-terminal domain, beta-propeller DDE06_RS01215 PF00521 DNA gyrase/topoisomerase IV, subunit A DDE06_RS01230 PF01751 Toprim domain DDE06_RS01230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS01230 PF00986 DNA gyrase B subunit, carboxyl terminus DDE06_RS01230 PF00204 DNA gyrase B DDE06_RS01240 PF00929 Exonuclease DDE06_RS01240 PF04851 Type III restriction enzyme, res subunit DDE06_RS01240 PF13307 Helicase C-terminal domain DDE06_RS01245 PF04545 Sigma-70, region 4 DDE06_RS01245 PF04539 Sigma-70 region 3 DDE06_RS01245 PF04542 Sigma-70 region 2 DDE06_RS01245 PF00140 Sigma-70 factor, region 1.2 DDE06_RS01260 PF00348 Polyprenyl synthetase DDE06_RS01270 PF01464 Transglycosylase SLT domain DDE06_RS01270 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DDE06_RS01275 PF00069 Protein kinase domain DDE06_RS01275 PF03793 PASTA domain DDE06_RS01280 PF01474 Class-II DAHP synthetase family DDE06_RS01285 PF00365 Phosphofructokinase DDE06_RS01295 PF00929 Exonuclease DDE06_RS01295 PF01541 GIY-YIG catalytic domain DDE06_RS01305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DDE06_RS01305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DDE06_RS01315 PF01521 Iron-sulphur cluster biosynthesis DDE06_RS01325 PF01546 Peptidase family M20/M25/M40 DDE06_RS01325 PF07687 Peptidase dimerisation domain DDE06_RS01340 PF02789 Cytosol aminopeptidase family, N-terminal domain DDE06_RS01340 PF00883 Cytosol aminopeptidase family, catalytic domain DDE06_RS01350 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS01350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DDE06_RS01355 PF02817 e3 binding domain DDE06_RS01355 PF00364 Biotin-requiring enzyme DDE06_RS01355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DDE06_RS01375 PF03951 Glutamine synthetase, beta-Grasp domain DDE06_RS01375 PF00120 Glutamine synthetase, catalytic domain DDE06_RS01385 PF03710 Glutamate-ammonia ligase adenylyltransferase DDE06_RS01385 PF08335 GlnD PII-uridylyltransferase DDE06_RS01390 PF00120 Glutamine synthetase, catalytic domain DDE06_RS01390 PF03951 Glutamine synthetase, beta-Grasp domain DDE06_RS01400 PF00557 Metallopeptidase family M24 DDE06_RS01405 PF00480 ROK family DDE06_RS01415 PF03883 Peroxide stress protein YaaA DDE06_RS01425 PF01784 NIF3 (NGG1p interacting factor 3) DDE06_RS01430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DDE06_RS01435 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DDE06_RS01445 PF02806 Alpha amylase, C-terminal all-beta domain DDE06_RS01445 PF00128 Alpha amylase, catalytic domain DDE06_RS01445 PF03714 Bacterial pullanase-associated domain DDE06_RS01460 PF00456 Transketolase, thiamine diphosphate binding domain DDE06_RS01460 PF17831 Pyruvate dehydrogenase E1 component middle domain DDE06_RS01465 PF00664 ABC transporter transmembrane region DDE06_RS01465 PF00005 ABC transporter DDE06_RS01470 PF00664 ABC transporter transmembrane region DDE06_RS01470 PF00005 ABC transporter DDE06_RS01475 PF13419 Haloacid dehalogenase-like hydrolase DDE06_RS01480 PF01300 Telomere recombination DDE06_RS01500 PF01370 NAD dependent epimerase/dehydratase family DDE06_RS01500 PF08338 Domain of unknown function (DUF1731) DDE06_RS01505 PF01327 Polypeptide deformylase DDE06_RS01535 PF00005 ABC transporter DDE06_RS01540 PF01032 FecCD transport family DDE06_RS01570 PF02416 mttA/Hcf106 family DDE06_RS01575 PF02416 mttA/Hcf106 family DDE06_RS01580 PF00902 Sec-independent protein translocase protein (TatC) DDE06_RS01590 PF08278 DNA primase DnaG DnaB-binding DDE06_RS01590 PF01807 CHC2 zinc finger DDE06_RS01590 PF10410 DnaB-helicase binding domain of primase DDE06_RS01590 PF13662 Toprim domain DDE06_RS01590 PF08275 DNA primase catalytic core, N-terminal domain DDE06_RS01595 PF01966 HD domain DDE06_RS01595 PF13286 Phosphohydrolase-associated domain DDE06_RS01605 PF01207 Dihydrouridine synthase (Dus) DDE06_RS01615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DDE06_RS01615 PF03129 Anticodon binding domain DDE06_RS01625 PF00005 ABC transporter DDE06_RS01630 PF00950 ABC 3 transport family DDE06_RS01635 PF01475 Ferric uptake regulator family DDE06_RS01650 PF07733 Bacterial DNA polymerase III alpha NTPase domain DDE06_RS01650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DDE06_RS01650 PF02811 PHP domain DDE06_RS01650 PF14579 Helix-hairpin-helix motif DDE06_RS01660 PF00849 RNA pseudouridylate synthase DDE06_RS01665 PF01252 Signal peptidase (SPase) II DDE06_RS01680 PF04472 Cell division protein SepF DDE06_RS01685 PF02578 Multi-copper polyphenol oxidoreductase laccase DDE06_RS01690 PF00091 Tubulin/FtsZ family, GTPase domain DDE06_RS01690 PF12327 FtsZ family, C-terminal domain DDE06_RS01700 PF08245 Mur ligase middle domain DDE06_RS01700 PF02875 Mur ligase family, glutamate ligase domain DDE06_RS01700 PF01225 Mur ligase family, catalytic domain DDE06_RS01705 PF04101 Glycosyltransferase family 28 C-terminal domain DDE06_RS01705 PF03033 Glycosyltransferase family 28 N-terminal domain DDE06_RS01710 PF01098 Cell cycle protein DDE06_RS01715 PF08245 Mur ligase middle domain DDE06_RS01715 PF02875 Mur ligase family, glutamate ligase domain DDE06_RS01720 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DDE06_RS01720 PF00953 Glycosyl transferase family 4 DDE06_RS01725 PF01225 Mur ligase family, catalytic domain DDE06_RS01725 PF08245 Mur ligase middle domain DDE06_RS01725 PF02875 Mur ligase family, glutamate ligase domain DDE06_RS01730 PF08245 Mur ligase middle domain DDE06_RS01730 PF01225 Mur ligase family, catalytic domain DDE06_RS01730 PF02875 Mur ligase family, glutamate ligase domain DDE06_RS01735 PF00905 Penicillin binding protein transpeptidase domain DDE06_RS01735 PF03717 Penicillin-binding Protein dimerisation domain DDE06_RS01745 PF01795 MraW methylase family DDE06_RS01750 PF02381 MraZ protein, putative antitoxin-like DDE06_RS01760 PF11799 impB/mucB/samB family C-terminal domain DDE06_RS01760 PF00817 impB/mucB/samB family DDE06_RS01780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DDE06_RS01780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DDE06_RS01785 PF13193 AMP-binding enzyme C-terminal domain DDE06_RS01785 PF00501 AMP-binding enzyme DDE06_RS01790 PF03477 ATP cone domain DDE06_RS01800 PF00717 Peptidase S24-like DDE06_RS01800 PF01726 LexA DNA binding domain DDE06_RS01805 PF13307 Helicase C-terminal domain DDE06_RS01810 PF01926 50S ribosome-binding GTPase DDE06_RS01810 PF13167 GTP-binding GTPase N-terminal DDE06_RS01810 PF16360 GTP-binding GTPase Middle Region DDE06_RS01815 PF08468 Methyltransferase small domain N-terminal DDE06_RS01815 PF05175 Methyltransferase small domain DDE06_RS01825 PF00919 Uncharacterized protein family UPF0004 DDE06_RS01825 PF04055 Radical SAM superfamily DDE06_RS01830 PF02631 RecX family DDE06_RS01835 PF00154 recA bacterial DNA recombination protein DDE06_RS01850 PF00994 Probable molybdopterin binding domain DDE06_RS01850 PF18146 Damage-inducible protein CinA KH domain DDE06_RS01850 PF02464 Competence-damaged protein DDE06_RS01855 PF01066 CDP-alcohol phosphatidyltransferase DDE06_RS01865 PF17854 FtsK alpha domain DDE06_RS01865 PF01580 FtsK/SpoIIIE family DDE06_RS01865 PF09397 Ftsk gamma domain DDE06_RS01870 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DDE06_RS01870 PF12706 Beta-lactamase superfamily domain DDE06_RS01870 PF17770 Ribonuclease J C-terminal domain DDE06_RS01875 PF00701 Dihydrodipicolinate synthetase family DDE06_RS01885 PF12419 SNF2 Helicase protein DDE06_RS01885 PF00176 SNF2 family N-terminal domain DDE06_RS01885 PF00271 Helicase conserved C-terminal domain DDE06_RS01890 PF05173 Dihydrodipicolinate reductase, C-terminus DDE06_RS01890 PF01113 Dihydrodipicolinate reductase, N-terminus DDE06_RS01895 PF05193 Peptidase M16 inactive domain DDE06_RS01895 PF00675 Insulinase (Peptidase family M16) DDE06_RS01905 PF00013 KH domain DDE06_RS01905 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DDE06_RS01905 PF01138 3' exoribonuclease family, domain 1 DDE06_RS01905 PF00575 S1 RNA binding domain DDE06_RS01910 PF00312 Ribosomal protein S15 DDE06_RS01920 PF00005 ABC transporter DDE06_RS01930 PF01687 Riboflavin kinase DDE06_RS01930 PF06574 FAD synthetase DDE06_RS01950 PF08402 TOBE domain DDE06_RS01950 PF00005 ABC transporter DDE06_RS01960 PF07690 Major Facilitator Superfamily DDE06_RS01965 PF00072 Response regulator receiver domain DDE06_RS01965 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS01970 PF00989 PAS fold DDE06_RS01970 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS01970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS01975 PF16198 tRNA pseudouridylate synthase B C-terminal domain DDE06_RS01975 PF09142 tRNA Pseudouridine synthase II, C terminal DDE06_RS01975 PF01509 TruB family pseudouridylate synthase (N terminal domain) DDE06_RS01980 PF02033 Ribosome-binding factor A DDE06_RS01985 PF11987 Translation-initiation factor 2 DDE06_RS01985 PF00009 Elongation factor Tu GTP binding domain DDE06_RS01985 PF04760 Translation initiation factor IF-2, N-terminal region DDE06_RS01995 PF13184 NusA-like KH domain DDE06_RS01995 PF08529 NusA N-terminal domain DDE06_RS02000 PF02576 RimP N-terminal domain DDE06_RS02000 PF17384 RimP C-terminal SH3 domain DDE06_RS02010 PF03129 Anticodon binding domain DDE06_RS02010 PF04073 Aminoacyl-tRNA editing domain DDE06_RS02010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DDE06_RS02020 PF04551 GcpE protein DDE06_RS02025 PF02163 Peptidase family M50 DDE06_RS02025 PF17820 PDZ domain DDE06_RS02030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DDE06_RS02030 PF13288 DXP reductoisomerase C-terminal domain DDE06_RS02030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DDE06_RS02040 PF04055 Radical SAM superfamily DDE06_RS02050 PF01765 Ribosome recycling factor DDE06_RS02055 PF00696 Amino acid kinase family DDE06_RS02065 PF07690 Major Facilitator Superfamily DDE06_RS02075 PF01494 FAD binding domain DDE06_RS02080 PF00766 Electron transfer flavoprotein FAD-binding domain DDE06_RS02080 PF01012 Electron transfer flavoprotein domain DDE06_RS02085 PF01012 Electron transfer flavoprotein domain DDE06_RS02090 PF00889 Elongation factor TS DDE06_RS02095 PF00318 Ribosomal protein S2 DDE06_RS02100 PF03458 UPF0126 domain DDE06_RS02105 PF01551 Peptidase family M23 DDE06_RS02110 PF02899 Phage integrase, N-terminal SAM-like domain DDE06_RS02110 PF00589 Phage integrase family DDE06_RS02115 PF17782 DprA winged helix domain DDE06_RS02115 PF02481 DNA recombination-mediator protein A DDE06_RS02120 PF01078 Magnesium chelatase, subunit ChlI DDE06_RS02120 PF13335 Magnesium chelatase, subunit ChlI C-terminal DDE06_RS02125 PF02021 Uncharacterised protein family UPF0102 DDE06_RS02130 PF10611 Protein of unknown function (DUF2469) DDE06_RS02135 PF01351 Ribonuclease HII DDE06_RS02140 PF10502 Signal peptidase, peptidase S26 DDE06_RS02145 PF01245 Ribosomal protein L19 DDE06_RS02150 PF01746 tRNA (Guanine-1)-methyltransferase DDE06_RS02155 PF01782 RimM N-terminal domain DDE06_RS02155 PF05239 PRC-barrel domain DDE06_RS02165 PF00886 Ribosomal protein S16 DDE06_RS02170 PF01545 Cation efflux family DDE06_RS02170 PF16916 Dimerisation domain of Zinc Transporter DDE06_RS02180 PF01979 Amidohydrolase family DDE06_RS02185 PF02978 Signal peptide binding domain DDE06_RS02185 PF02881 SRP54-type protein, helical bundle domain DDE06_RS02185 PF00448 SRP54-type protein, GTPase domain DDE06_RS02190 PF00448 SRP54-type protein, GTPase domain DDE06_RS02190 PF02881 SRP54-type protein, helical bundle domain DDE06_RS02195 PF17440 Thiol-activated cytolysin beta sandwich domain DDE06_RS02195 PF01289 Thiol-activated cytolysin DDE06_RS02205 PF06470 SMC proteins Flexible Hinge Domain DDE06_RS02205 PF02463 RecF/RecN/SMC N terminal domain DDE06_RS02210 PF00334 Nucleoside diphosphate kinase DDE06_RS02215 PF08245 Mur ligase middle domain DDE06_RS02215 PF02875 Mur ligase family, glutamate ligase domain DDE06_RS02220 PF08264 Anticodon-binding domain of tRNA DDE06_RS02220 PF00133 tRNA synthetases class I (I, L, M and V) DDE06_RS02235 PF03807 NADP oxidoreductase coenzyme F420-dependent DDE06_RS02235 PF14748 Pyrroline-5-carboxylate reductase dimerisation DDE06_RS02245 PF00133 tRNA synthetases class I (I, L, M and V) DDE06_RS02245 PF08264 Anticodon-binding domain of tRNA DDE06_RS02250 PF00501 AMP-binding enzyme DDE06_RS02255 PF01817 Chorismate mutase type II DDE06_RS02255 PF02153 Prephenate dehydrogenase DDE06_RS02260 PF07724 AAA domain (Cdc48 subfamily) DDE06_RS02260 PF06689 ClpX C4-type zinc finger DDE06_RS02260 PF10431 C-terminal, D2-small domain, of ClpB protein DDE06_RS02265 PF00574 Clp protease DDE06_RS02270 PF00574 Clp protease DDE06_RS02275 PF05697 Bacterial trigger factor protein (TF) DDE06_RS02275 PF05698 Bacterial trigger factor protein (TF) C-terminus DDE06_RS02275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DDE06_RS02280 PF00248 Aldo/keto reductase family DDE06_RS02290 PF00933 Glycosyl hydrolase family 3 N terminal domain DDE06_RS02300 PF00703 Glycosyl hydrolases family 2 DDE06_RS02300 PF02837 Glycosyl hydrolases family 2, sugar binding domain DDE06_RS02300 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DDE06_RS02305 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS02320 PF00005 ABC transporter DDE06_RS02320 PF16326 ABC transporter C-terminal domain DDE06_RS02320 PF12848 ABC transporter DDE06_RS02335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DDE06_RS02335 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS02345 PF01783 Ribosomal L32p protein family DDE06_RS02350 PF01205 Uncharacterized protein family UPF0029 DDE06_RS02350 PF09186 Domain of unknown function (DUF1949) DDE06_RS02355 PF00291 Pyridoxal-phosphate dependent enzyme DDE06_RS02360 PF00132 Bacterial transferase hexapeptide (six repeats) DDE06_RS02370 PF02502 Ribose/Galactose Isomerase DDE06_RS02375 PF01431 Peptidase family M13 DDE06_RS02375 PF05649 Peptidase family M13 DDE06_RS02380 PF05661 Protein of unknown function (DUF808) DDE06_RS02385 PF01433 Peptidase family M1 domain DDE06_RS02385 PF11838 ERAP1-like C-terminal domain DDE06_RS02390 PF13302 Acetyltransferase (GNAT) domain DDE06_RS02390 PF00958 GMP synthase C terminal domain DDE06_RS02390 PF03352 Methyladenine glycosylase DDE06_RS02390 PF00117 Glutamine amidotransferase class-I DDE06_RS02390 PF13673 Acetyltransferase (GNAT) domain DDE06_RS02400 PF02446 4-alpha-glucanotransferase DDE06_RS02410 PF00005 ABC transporter DDE06_RS02410 PF12848 ABC transporter DDE06_RS02435 PF00929 Exonuclease DDE06_RS02455 PF00535 Glycosyl transferase family 2 DDE06_RS02465 PF00535 Glycosyl transferase family 2 DDE06_RS02480 PF00535 Glycosyl transferase family 2 DDE06_RS02495 PF01501 Glycosyl transferase family 8 DDE06_RS02495 PF00535 Glycosyl transferase family 2 DDE06_RS02500 PF04991 LicD family DDE06_RS02505 PF12804 MobA-like NTP transferase domain DDE06_RS02510 PF00534 Glycosyl transferases group 1 DDE06_RS02510 PF13439 Glycosyltransferase Family 4 DDE06_RS02520 PF00271 Helicase conserved C-terminal domain DDE06_RS02520 PF08148 DSHCT (NUC185) domain DDE06_RS02520 PF00270 DEAD/DEAH box helicase DDE06_RS02525 PF01168 Alanine racemase, N-terminal domain DDE06_RS02530 PF04055 Radical SAM superfamily DDE06_RS02535 PF02901 Pyruvate formate lyase-like DDE06_RS02535 PF01228 Glycine radical DDE06_RS02540 PF02901 Pyruvate formate lyase-like DDE06_RS02540 PF01228 Glycine radical DDE06_RS02550 PF01063 Amino-transferase class IV DDE06_RS02555 PF00180 Isocitrate/isopropylmalate dehydrogenase DDE06_RS02570 PF00206 Lyase DDE06_RS02570 PF10415 Fumarase C C-terminus DDE06_RS02580 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DDE06_RS02580 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DDE06_RS02585 PF10369 Small subunit of acetolactate synthase DDE06_RS02590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DDE06_RS02590 PF00205 Thiamine pyrophosphate enzyme, central domain DDE06_RS02590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DDE06_RS02595 PF02080 TrkA-C domain DDE06_RS02595 PF06826 Predicted Permease Membrane Region DDE06_RS02600 PF00920 Dehydratase family DDE06_RS02605 PF08241 Methyltransferase domain DDE06_RS02645 PF00390 Malic enzyme, N-terminal domain DDE06_RS02645 PF03949 Malic enzyme, NAD binding domain DDE06_RS02650 PF02934 GatB/GatE catalytic domain DDE06_RS02650 PF02637 GatB domain DDE06_RS02655 PF01425 Amidase DDE06_RS02660 PF02686 Glu-tRNAGln amidotransferase C subunit DDE06_RS02665 PF13091 PLD-like domain DDE06_RS02665 PF13396 Phospholipase_D-nuclease N-terminal DDE06_RS02670 PF00082 Subtilase family DDE06_RS02670 PF04151 Bacterial pre-peptidase C-terminal domain DDE06_RS02675 PF13784 Fic/DOC family N-terminal DDE06_RS02675 PF02661 Fic/DOC family DDE06_RS02680 PF00294 pfkB family carbohydrate kinase DDE06_RS02690 PF03747 ADP-ribosylglycohydrolase DDE06_RS02695 PF07702 UTRA domain DDE06_RS02695 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS02700 PF12826 Helix-hairpin-helix motif DDE06_RS02700 PF00533 BRCA1 C Terminus (BRCT) domain DDE06_RS02700 PF03120 NAD-dependent DNA ligase OB-fold domain DDE06_RS02700 PF01653 NAD-dependent DNA ligase adenylation domain DDE06_RS02700 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DDE06_RS02705 PF02586 SOS response associated peptidase (SRAP) DDE06_RS02710 PF07730 Histidine kinase DDE06_RS02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS02715 PF00196 Bacterial regulatory proteins, luxR family DDE06_RS02715 PF00072 Response regulator receiver domain DDE06_RS02720 PF00005 ABC transporter DDE06_RS02720 PF02687 FtsX-like permease family DDE06_RS02720 PF12704 MacB-like periplasmic core domain DDE06_RS02730 PF02467 Transcription factor WhiB DDE06_RS02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS02735 PF12282 Signal transduction histidine kinase DDE06_RS02735 PF07568 Histidine kinase DDE06_RS02745 PF00303 Thymidylate synthase DDE06_RS02750 PF00186 Dihydrofolate reductase DDE06_RS02770 PF02910 Fumarate reductase flavoprotein C-term DDE06_RS02770 PF00890 FAD binding domain DDE06_RS02780 PF01699 Sodium/calcium exchanger protein DDE06_RS02790 PF00005 ABC transporter DDE06_RS02795 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS02795 PF00155 Aminotransferase class I and II DDE06_RS02815 PF17974 Galactose-binding domain-like DDE06_RS02815 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DDE06_RS02815 PF08305 NPCBM/NEW2 domain DDE06_RS02815 PF18080 Galactose mutarotase-like fold domain DDE06_RS02815 PF12905 Endo-alpha-N-acetylgalactosaminidase DDE06_RS02815 PF17451 Glycosyl hydrolase 101 beta sandwich domain DDE06_RS02820 PF03699 Uncharacterised protein family (UPF0182) DDE06_RS02830 PF05362 Lon protease (S16) C-terminal proteolytic domain DDE06_RS02830 PF13180 PDZ domain DDE06_RS02845 PF13361 UvrD-like helicase C-terminal domain DDE06_RS02845 PF00580 UvrD/REP helicase N-terminal domain DDE06_RS02845 PF00570 HRDC domain DDE06_RS02850 PF09297 NADH pyrophosphatase zinc ribbon domain DDE06_RS02850 PF00293 NUDIX domain DDE06_RS02850 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DDE06_RS02855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DDE06_RS02855 PF00128 Alpha amylase, catalytic domain DDE06_RS02860 PF00579 tRNA synthetases class I (W and Y) DDE06_RS02865 PF00343 Carbohydrate phosphorylase DDE06_RS02870 PF07885 Ion channel DDE06_RS02885 PF00005 ABC transporter DDE06_RS02895 PF11896 Domain of unknown function (DUF3416) DDE06_RS02895 PF00128 Alpha amylase, catalytic domain DDE06_RS02900 PF00128 Alpha amylase, catalytic domain DDE06_RS02900 PF16657 Maltogenic Amylase, C-terminal domain DDE06_RS02905 PF01636 Phosphotransferase enzyme family DDE06_RS02905 PF18085 Maltokinase N-terminal cap domain DDE06_RS02910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DDE06_RS02910 PF02806 Alpha amylase, C-terminal all-beta domain DDE06_RS02910 PF00128 Alpha amylase, catalytic domain DDE06_RS02925 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS02930 PF14785 Maltose transport system permease protein MalF P2 domain DDE06_RS02930 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS02940 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS02945 PF00128 Alpha amylase, catalytic domain DDE06_RS02945 PF16657 Maltogenic Amylase, C-terminal domain DDE06_RS02985 PF01939 Endonuclease NucS DDE06_RS02995 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DDE06_RS02995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DDE06_RS03000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DDE06_RS03000 PF02874 ATP synthase alpha/beta family, beta-barrel domain DDE06_RS03005 PF00231 ATP synthase DDE06_RS03010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DDE06_RS03010 PF02874 ATP synthase alpha/beta family, beta-barrel domain DDE06_RS03010 PF00306 ATP synthase alpha/beta chain, C terminal domain DDE06_RS03015 PF00213 ATP synthase delta (OSCP) subunit DDE06_RS03020 PF00430 ATP synthase B/B' CF(0) DDE06_RS03025 PF00137 ATP synthase subunit C DDE06_RS03030 PF00119 ATP synthase A chain DDE06_RS03040 PF00953 Glycosyl transferase family 4 DDE06_RS03045 PF01300 Telomere recombination DDE06_RS03050 PF17827 PrmC N-terminal domain DDE06_RS03055 PF00472 RF-1 domain DDE06_RS03055 PF03462 PCRF domain DDE06_RS03060 PF01197 Ribosomal protein L31 DDE06_RS03065 PF07498 Rho termination factor, N-terminal domain DDE06_RS03065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DDE06_RS03065 PF07497 Rho termination factor, RNA-binding domain DDE06_RS03070 PF00288 GHMP kinases N terminal domain DDE06_RS03075 PF00291 Pyridoxal-phosphate dependent enzyme DDE06_RS03080 PF01842 ACT domain DDE06_RS03080 PF00742 Homoserine dehydrogenase DDE06_RS03080 PF03447 Homoserine dehydrogenase, NAD binding domain DDE06_RS03085 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DDE06_RS03085 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DDE06_RS03090 PF03485 Arginyl tRNA synthetase N terminal domain DDE06_RS03090 PF05746 DALR anticodon binding domain DDE06_RS03090 PF00750 tRNA synthetases class I (R) DDE06_RS03115 PF00005 ABC transporter DDE06_RS03130 PF03009 Glycerophosphoryl diester phosphodiesterase family DDE06_RS03135 PF01551 Peptidase family M23 DDE06_RS03140 PF00571 CBS domain DDE06_RS03140 PF01595 Cyclin M transmembrane N-terminal domain DDE06_RS03145 PF01595 Cyclin M transmembrane N-terminal domain DDE06_RS03145 PF00571 CBS domain DDE06_RS03145 PF03471 Transporter associated domain DDE06_RS03150 PF16870 2-oxoglutarate dehydrogenase C-terminal DDE06_RS03150 PF00676 Dehydrogenase E1 component DDE06_RS03150 PF16078 2-oxoglutarate dehydrogenase N-terminus DDE06_RS03150 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DDE06_RS03150 PF02779 Transketolase, pyrimidine binding domain DDE06_RS03160 PF00877 NlpC/P60 family DDE06_RS03160 PF01476 LysM domain DDE06_RS03160 PF08239 Bacterial SH3 domain DDE06_RS03175 PF04542 Sigma-70 region 2 DDE06_RS03175 PF08281 Sigma-70, region 4 DDE06_RS03180 PF01979 Amidohydrolase family DDE06_RS03185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DDE06_RS03190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DDE06_RS03195 PF00480 ROK family DDE06_RS03200 PF00701 Dihydrodipicolinate synthetase family DDE06_RS03205 PF00005 ABC transporter DDE06_RS03205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS03210 PF00005 ABC transporter DDE06_RS03210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS03215 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DDE06_RS03230 PF07859 alpha/beta hydrolase fold DDE06_RS03255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DDE06_RS03260 PF03193 RsgA GTPase DDE06_RS03265 PF00459 Inositol monophosphatase family DDE06_RS03270 PF12320 Type 5 capsule protein repressor C-terminal domain DDE06_RS03270 PF00149 Calcineurin-like phosphoesterase DDE06_RS03275 PF13476 AAA domain DDE06_RS03315 PF01043 SecA preprotein cross-linking domain DDE06_RS03315 PF07516 SecA Wing and Scaffold domain DDE06_RS03315 PF07517 SecA DEAD-like domain DDE06_RS03320 PF00348 Polyprenyl synthetase DDE06_RS03325 PF00361 Proton-conducting membrane transporter DDE06_RS03330 PF00361 Proton-conducting membrane transporter DDE06_RS03335 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DDE06_RS03335 PF00361 Proton-conducting membrane transporter DDE06_RS03340 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DDE06_RS03345 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DDE06_RS03350 PF12838 4Fe-4S dicluster domain DDE06_RS03355 PF00146 NADH dehydrogenase DDE06_RS03360 PF01568 Molydopterin dinucleotide binding domain DDE06_RS03360 PF00384 Molybdopterin oxidoreductase DDE06_RS03360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DDE06_RS03360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DDE06_RS03365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DDE06_RS03365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DDE06_RS03365 PF10531 SLBB domain DDE06_RS03375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DDE06_RS03380 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DDE06_RS03385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DDE06_RS03390 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DDE06_RS03395 PF01494 FAD binding domain DDE06_RS03400 PF01209 ubiE/COQ5 methyltransferase family DDE06_RS03405 PF00425 chorismate binding enzyme DDE06_RS03410 PF13180 PDZ domain DDE06_RS03415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DDE06_RS03415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DDE06_RS03420 PF18374 Enolase N-terminal domain-like DDE06_RS03420 PF13378 Enolase C-terminal domain-like DDE06_RS03425 PF00378 Enoyl-CoA hydratase/isomerase DDE06_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03450 PF13193 AMP-binding enzyme C-terminal domain DDE06_RS03450 PF00501 AMP-binding enzyme DDE06_RS03455 PF01040 UbiA prenyltransferase family DDE06_RS03465 PF00300 Histidine phosphatase superfamily (branch 1) DDE06_RS03470 PF01047 MarR family DDE06_RS03480 PF12728 Helix-turn-helix domain DDE06_RS03485 PF02386 Cation transport protein DDE06_RS03490 PF02080 TrkA-C domain DDE06_RS03490 PF02254 TrkA-N domain DDE06_RS03495 PF06745 KaiC DDE06_RS03495 PF18073 Rubredoxin metal binding domain DDE06_RS03505 PF10576 Iron-sulfur binding domain of endonuclease III DDE06_RS03505 PF00730 HhH-GPD superfamily base excision DNA repair protein DDE06_RS03505 PF00633 Helix-hairpin-helix motif DDE06_RS03520 PF04324 BFD-like [2Fe-2S] binding domain DDE06_RS03520 PF01266 FAD dependent oxidoreductase DDE06_RS03525 PF00890 FAD binding domain DDE06_RS03530 PF02754 Cysteine-rich domain DDE06_RS03530 PF13183 4Fe-4S dicluster domain DDE06_RS03535 PF08450 SMP-30/Gluconolactonase/LRE-like region DDE06_RS03545 PF00230 Major intrinsic protein DDE06_RS03550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS03550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS03555 PF03176 MMPL family DDE06_RS03560 PF01336 OB-fold nucleic acid binding domain DDE06_RS03560 PF00152 tRNA synthetases class II (D, K and N) DDE06_RS03570 PF02261 Aspartate decarboxylase DDE06_RS03575 PF02569 Pantoate-beta-alanine ligase DDE06_RS03585 PF02733 Dak1 domain DDE06_RS03590 PF02734 DAK2 domain DDE06_RS03595 PF02896 PEP-utilising enzyme, TIM barrel domain DDE06_RS03595 PF00381 PTS HPr component phosphorylation site DDE06_RS03595 PF00391 PEP-utilising enzyme, mobile domain DDE06_RS03595 PF05524 PEP-utilising enzyme, N-terminal DDE06_RS03595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DDE06_RS03605 PF16353 Domain of unknown function(DUF4981) DDE06_RS03605 PF00703 Glycosyl hydrolases family 2 DDE06_RS03605 PF02837 Glycosyl hydrolases family 2, sugar binding domain DDE06_RS03605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DDE06_RS03605 PF02929 Beta galactosidase small chain DDE06_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03620 PF13416 Bacterial extracellular solute-binding protein DDE06_RS03625 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS03645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DDE06_RS03650 PF00809 Pterin binding enzyme DDE06_RS03655 PF01227 GTP cyclohydrolase I DDE06_RS03660 PF00004 ATPase family associated with various cellular activities (AAA) DDE06_RS03660 PF17862 AAA+ lid domain DDE06_RS03660 PF01434 Peptidase family M41 DDE06_RS03665 PF00156 Phosphoribosyl transferase domain DDE06_RS03670 PF09179 TilS substrate binding domain DDE06_RS03670 PF01171 PP-loop family DDE06_RS03680 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DDE06_RS03685 PF00719 Inorganic pyrophosphatase DDE06_RS03690 PF00877 NlpC/P60 family DDE06_RS03695 PF00561 alpha/beta hydrolase fold DDE06_RS03700 PF12146 Serine aminopeptidase, S33 DDE06_RS03710 PF13183 4Fe-4S dicluster domain DDE06_RS03710 PF02913 FAD linked oxidases, C-terminal domain DDE06_RS03710 PF01565 FAD binding domain DDE06_RS03715 PF00391 PEP-utilising enzyme, mobile domain DDE06_RS03715 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DDE06_RS03715 PF02896 PEP-utilising enzyme, TIM barrel domain DDE06_RS03730 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03735 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS03740 PF00128 Alpha amylase, catalytic domain DDE06_RS03745 PF01381 Helix-turn-helix DDE06_RS03755 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DDE06_RS03770 PF01867 CRISPR associated protein Cas1 DDE06_RS03800 PF18395 Cas3 C-terminal domain DDE06_RS03800 PF18019 HD domain DDE06_RS03800 PF00270 DEAD/DEAH box helicase DDE06_RS03835 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS03850 PF00005 ABC transporter DDE06_RS03855 PF02361 Cobalt transport protein DDE06_RS03860 PF03747 ADP-ribosylglycohydrolase DDE06_RS03880 PF00155 Aminotransferase class I and II DDE06_RS03890 PF09370 Phosphoenolpyruvate hydrolase-like DDE06_RS03895 PF02308 MgtC family DDE06_RS03900 PF00083 Sugar (and other) transporter DDE06_RS03905 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS03920 PF00149 Calcineurin-like phosphoesterase DDE06_RS03920 PF02872 5'-nucleotidase, C-terminal domain DDE06_RS03940 PF00005 ABC transporter DDE06_RS03945 PF13847 Methyltransferase domain DDE06_RS03950 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS03955 PF00005 ABC transporter DDE06_RS03960 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS03965 PF13407 Periplasmic binding protein domain DDE06_RS03970 PF00294 pfkB family carbohydrate kinase DDE06_RS03980 PF01695 IstB-like ATP binding protein DDE06_RS03985 PF00665 Integrase core domain DDE06_RS03990 PF05025 RbsD / FucU transport protein family DDE06_RS03995 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DDE06_RS03995 PF00703 Glycosyl hydrolases family 2 DDE06_RS03995 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DDE06_RS03995 PF16355 Domain of unknown function (DUF4982) DDE06_RS03995 PF02837 Glycosyl hydrolases family 2, sugar binding domain DDE06_RS04000 PF00728 Glycosyl hydrolase family 20, catalytic domain DDE06_RS04000 PF02838 Glycosyl hydrolase family 20, domain 2 DDE06_RS04000 PF07691 PA14 domain DDE06_RS04010 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DDE06_RS04010 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DDE06_RS04020 PF02447 GntP family permease DDE06_RS04025 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS04035 PF16353 Domain of unknown function(DUF4981) DDE06_RS04035 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DDE06_RS04035 PF02837 Glycosyl hydrolases family 2, sugar binding domain DDE06_RS04035 PF02929 Beta galactosidase small chain DDE06_RS04035 PF00703 Glycosyl hydrolases family 2 DDE06_RS04050 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04065 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS04075 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04080 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04085 PF00703 Glycosyl hydrolases family 2 DDE06_RS04085 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DDE06_RS04085 PF02837 Glycosyl hydrolases family 2, sugar binding domain DDE06_RS04085 PF16353 Domain of unknown function(DUF4981) DDE06_RS04085 PF02929 Beta galactosidase small chain DDE06_RS04095 PF03553 Na+/H+ antiporter family DDE06_RS04100 PF00155 Aminotransferase class I and II DDE06_RS04105 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS04110 PF00005 ABC transporter DDE06_RS04115 PF13407 Periplasmic binding protein domain DDE06_RS04120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS04120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS04125 PF01261 Xylose isomerase-like TIM barrel DDE06_RS04150 PF01116 Fructose-bisphosphate aldolase class-II DDE06_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04160 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04170 PF08220 DeoR-like helix-turn-helix domain DDE06_RS04170 PF00455 DeoR C terminal sensor domain DDE06_RS04175 PF00480 ROK family DDE06_RS04175 PF01047 MarR family DDE06_RS04180 PF01055 Glycosyl hydrolases family 31 DDE06_RS04180 PF13802 Galactose mutarotase-like DDE06_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04205 PF00884 Sulfatase DDE06_RS04210 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS04215 PF00083 Sugar (and other) transporter DDE06_RS04220 PF13186 Iron-sulfur cluster-binding domain DDE06_RS04220 PF04055 Radical SAM superfamily DDE06_RS04225 PF01925 Sulfite exporter TauE/SafE DDE06_RS04230 PF02502 Ribose/Galactose Isomerase DDE06_RS04235 PF00107 Zinc-binding dehydrogenase DDE06_RS04235 PF08240 Alcohol dehydrogenase GroES-like domain DDE06_RS04240 PF02734 DAK2 domain DDE06_RS04240 PF02733 Dak1 domain DDE06_RS04245 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS04245 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS04250 PF00596 Class II Aldolase and Adducin N-terminal domain DDE06_RS04255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS04255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS04265 PF08220 DeoR-like helix-turn-helix domain DDE06_RS04265 PF05573 NosL DDE06_RS04270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS04270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS04285 PF04198 Putative sugar-binding domain DDE06_RS04285 PF13936 Helix-turn-helix domain DDE06_RS04290 PF07690 Major Facilitator Superfamily DDE06_RS04300 PF00294 pfkB family carbohydrate kinase DDE06_RS04305 PF10431 C-terminal, D2-small domain, of ClpB protein DDE06_RS04305 PF00004 ATPase family associated with various cellular activities (AAA) DDE06_RS04305 PF07724 AAA domain (Cdc48 subfamily) DDE06_RS04305 PF17871 AAA lid domain DDE06_RS04305 PF02861 Clp amino terminal domain, pathogenicity island component DDE06_RS04310 PF02580 D-Tyr-tRNA(Tyr) deacylase DDE06_RS04320 PF01571 Aminomethyltransferase folate-binding domain DDE06_RS04325 PF08768 Domain of unknown function (DUF1794) DDE06_RS04335 PF00149 Calcineurin-like phosphoesterase DDE06_RS04335 PF02872 5'-nucleotidase, C-terminal domain DDE06_RS04345 PF01235 Sodium:alanine symporter family DDE06_RS04355 PF01384 Phosphate transporter family DDE06_RS04360 PF00005 ABC transporter DDE06_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS04375 PF12849 PBP superfamily domain DDE06_RS04380 PF00300 Histidine phosphatase superfamily (branch 1) DDE06_RS04380 PF00293 NUDIX domain DDE06_RS04385 PF13089 Polyphosphate kinase N-terminal domain DDE06_RS04385 PF17941 Polyphosphate kinase C-terminal domain 1 DDE06_RS04385 PF13090 Polyphosphate kinase C-terminal domain 2 DDE06_RS04385 PF02503 Polyphosphate kinase middle domain DDE06_RS04395 PF12728 Helix-turn-helix domain DDE06_RS04395 PF00145 C-5 cytosine-specific DNA methylase DDE06_RS04400 PF09570 SinI restriction endonuclease DDE06_RS04445 PF01367 5'-3' exonuclease, C-terminal SAM fold DDE06_RS04445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DDE06_RS04445 PF00476 DNA polymerase family A DDE06_RS04445 PF01612 3'-5' exonuclease DDE06_RS04490 PF02773 S-adenosylmethionine synthetase, C-terminal domain DDE06_RS04490 PF00438 S-adenosylmethionine synthetase, N-terminal domain DDE06_RS04490 PF02772 S-adenosylmethionine synthetase, central domain DDE06_RS04495 PF01555 DNA methylase DDE06_RS04500 PF00145 C-5 cytosine-specific DNA methylase DDE06_RS04525 PF03354 Phage Terminase DDE06_RS04535 PF04860 Phage portal protein DDE06_RS04570 PF14338 Mrr N-terminal domain DDE06_RS04570 PF04471 Restriction endonuclease DDE06_RS04575 PF01022 Bacterial regulatory protein, arsR family DDE06_RS04605 PF13610 DDE domain DDE06_RS04615 PF07690 Major Facilitator Superfamily DDE06_RS04620 PF00440 Bacterial regulatory proteins, tetR family DDE06_RS04620 PF02909 Tetracyclin repressor-like, C-terminal domain DDE06_RS04635 PF13610 DDE domain DDE06_RS04670 PF05105 Bacteriophage holin family DDE06_RS04690 PF00239 Resolvase, N terminal domain DDE06_RS04690 PF02796 Helix-turn-helix domain of resolvase DDE06_RS04710 PF00398 Ribosomal RNA adenine dimethylase DDE06_RS04730 PF01641 SelR domain DDE06_RS04755 PF03023 Lipid II flippase MurJ DDE06_RS04760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DDE06_RS04760 PF00056 lactate/malate dehydrogenase, NAD binding domain DDE06_RS04775 PF13519 von Willebrand factor type A domain DDE06_RS04780 PF17802 Prealbumin-like fold domain DDE06_RS04780 PF05737 Collagen binding domain DDE06_RS04780 PF05738 Cna protein B-type domain DDE06_RS04790 PF02028 BCCT, betaine/carnitine/choline family transporter DDE06_RS04820 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DDE06_RS04820 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DDE06_RS04825 PF01259 SAICAR synthetase DDE06_RS04830 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DDE06_RS04830 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DDE06_RS04835 PF00709 Adenylosuccinate synthetase DDE06_RS04845 PF01116 Fructose-bisphosphate aldolase class-II DDE06_RS04850 PF01384 Phosphate transporter family DDE06_RS04860 PF00293 NUDIX domain DDE06_RS04895 PF10431 C-terminal, D2-small domain, of ClpB protein DDE06_RS04895 PF02861 Clp amino terminal domain, pathogenicity island component DDE06_RS04895 PF07724 AAA domain (Cdc48 subfamily) DDE06_RS04895 PF00004 ATPase family associated with various cellular activities (AAA) DDE06_RS04895 PF17871 AAA lid domain DDE06_RS04905 PF00749 tRNA synthetases class I (E and Q), catalytic domain DDE06_RS04915 PF00326 Prolyl oligopeptidase family DDE06_RS04915 PF07676 WD40-like Beta Propeller Repeat DDE06_RS04915 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DDE06_RS04925 PF03009 Glycerophosphoryl diester phosphodiesterase family DDE06_RS04940 PF00293 NUDIX domain DDE06_RS04950 PF01556 DnaJ C terminal domain DDE06_RS04950 PF00226 DnaJ domain DDE06_RS04950 PF00684 DnaJ central domain DDE06_RS04955 PF01025 GrpE DDE06_RS04960 PF00012 Hsp70 protein DDE06_RS04970 PF00156 Phosphoribosyl transferase domain DDE06_RS04975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DDE06_RS04980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DDE06_RS04980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DDE06_RS04985 PF00156 Phosphoribosyl transferase domain DDE06_RS04995 PF00384 Molybdopterin oxidoreductase DDE06_RS04995 PF01568 Molydopterin dinucleotide binding domain DDE06_RS04995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DDE06_RS05000 PF12800 4Fe-4S binding domain DDE06_RS05000 PF13247 4Fe-4S dicluster domain DDE06_RS05010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DDE06_RS05010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS05015 PF02583 Metal-sensitive transcriptional repressor DDE06_RS05020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DDE06_RS05020 PF00384 Molybdopterin oxidoreductase DDE06_RS05020 PF01568 Molydopterin dinucleotide binding domain DDE06_RS05025 PF13247 4Fe-4S dicluster domain DDE06_RS05025 PF12800 4Fe-4S binding domain DDE06_RS05035 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DDE06_RS05035 PF00326 Prolyl oligopeptidase family DDE06_RS05045 PF03649 Uncharacterised protein family (UPF0014) DDE06_RS05050 PF00480 ROK family DDE06_RS05075 PF07883 Cupin domain DDE06_RS05080 PF07690 Major Facilitator Superfamily DDE06_RS05095 PF00005 ABC transporter DDE06_RS05095 PF08402 TOBE domain DDE06_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05130 PF00361 Proton-conducting membrane transporter DDE06_RS05135 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DDE06_RS05140 PF13244 Domain of unknown function (DUF4040) DDE06_RS05140 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DDE06_RS05140 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DDE06_RS05140 PF00361 Proton-conducting membrane transporter DDE06_RS05145 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DDE06_RS05190 PF13683 Integrase core domain DDE06_RS05190 PF13276 HTH-like domain DDE06_RS05215 PF00561 alpha/beta hydrolase fold DDE06_RS05220 PF12169 DNA polymerase III subunits gamma and tau domain III DDE06_RS05225 PF02223 Thymidylate kinase DDE06_RS05230 PF13368 Topoisomerase C-terminal repeat DDE06_RS05230 PF01751 Toprim domain DDE06_RS05230 PF01131 DNA topoisomerase DDE06_RS05235 PF17827 PrmC N-terminal domain DDE06_RS05235 PF02390 Putative methyltransferase DDE06_RS05235 PF05175 Methyltransferase small domain DDE06_RS05245 PF13443 Cro/C1-type HTH DNA-binding domain DDE06_RS05250 PF00270 DEAD/DEAH box helicase DDE06_RS05250 PF00271 Helicase conserved C-terminal domain DDE06_RS05280 PF00437 Type II/IV secretion system protein DDE06_RS05295 PF00561 alpha/beta hydrolase fold DDE06_RS05300 PF10576 Iron-sulfur binding domain of endonuclease III DDE06_RS05300 PF00633 Helix-hairpin-helix motif DDE06_RS05300 PF00730 HhH-GPD superfamily base excision DNA repair protein DDE06_RS05305 PF13545 Crp-like helix-turn-helix domain DDE06_RS05305 PF00027 Cyclic nucleotide-binding domain DDE06_RS05320 PF02467 Transcription factor WhiB DDE06_RS05325 PF00912 Transglycosylase DDE06_RS05325 PF00905 Penicillin binding protein transpeptidase domain DDE06_RS05340 PF00128 Alpha amylase, catalytic domain DDE06_RS05340 PF02903 Alpha amylase, N-terminal ig-like domain DDE06_RS05350 PF04055 Radical SAM superfamily DDE06_RS05350 PF06463 Molybdenum Cofactor Synthesis C DDE06_RS05355 PF02391 MoaE protein DDE06_RS05360 PF01967 MoaC family DDE06_RS05365 PF03453 MoeA N-terminal region (domain I and II) DDE06_RS05365 PF00994 Probable molybdopterin binding domain DDE06_RS05365 PF03454 MoeA C-terminal region (domain IV) DDE06_RS05370 PF00994 Probable molybdopterin binding domain DDE06_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05410 PF00581 Rhodanese-like domain DDE06_RS05410 PF00899 ThiF family DDE06_RS05425 PF08903 Domain of unknown function (DUF1846) DDE06_RS05430 PF05525 Branched-chain amino acid transport protein DDE06_RS05440 PF14437 MafB19-like deaminase DDE06_RS05470 PF00800 Prephenate dehydratase DDE06_RS05480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DDE06_RS05480 PF02403 Seryl-tRNA synthetase N-terminal domain DDE06_RS05510 PF02056 Family 4 glycosyl hydrolase DDE06_RS05510 PF11975 Family 4 glycosyl hydrolase C-terminal domain DDE06_RS05515 PF00294 pfkB family carbohydrate kinase DDE06_RS05520 PF13407 Periplasmic binding protein domain DDE06_RS05525 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS05530 PF00005 ABC transporter DDE06_RS05555 PF10509 Galactokinase galactose-binding signature DDE06_RS05555 PF08544 GHMP kinases C terminal DDE06_RS05555 PF00288 GHMP kinases N terminal domain DDE06_RS05560 PF02384 N-6 DNA Methylase DDE06_RS05560 PF12161 HsdM N-terminal domain DDE06_RS05570 PF02384 N-6 DNA Methylase DDE06_RS05570 PF12161 HsdM N-terminal domain DDE06_RS05630 PF02384 N-6 DNA Methylase DDE06_RS05630 PF12161 HsdM N-terminal domain DDE06_RS05635 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DDE06_RS05640 PF01850 PIN domain DDE06_RS05645 PF01420 Type I restriction modification DNA specificity domain DDE06_RS05665 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DDE06_RS05665 PF18766 SWI2/SNF2 ATPase DDE06_RS05665 PF12008 Type I restriction and modification enzyme - subunit R C terminal DDE06_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05690 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05705 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS05710 PF00664 ABC transporter transmembrane region DDE06_RS05710 PF00005 ABC transporter DDE06_RS05715 PF00005 ABC transporter DDE06_RS05715 PF00664 ABC transporter transmembrane region DDE06_RS05730 PF01032 FecCD transport family DDE06_RS05740 PF00005 ABC transporter DDE06_RS05750 PF13649 Methyltransferase domain DDE06_RS05755 PF00294 pfkB family carbohydrate kinase DDE06_RS05760 PF01081 KDPG and KHG aldolase DDE06_RS05765 PF03786 D-mannonate dehydratase (UxuA) DDE06_RS05770 PF08125 Mannitol dehydrogenase C-terminal domain DDE06_RS05770 PF01232 Mannitol dehydrogenase Rossmann domain DDE06_RS05775 PF01614 Bacterial transcriptional regulator DDE06_RS05775 PF09339 IclR helix-turn-helix domain DDE06_RS05780 PF00005 ABC transporter DDE06_RS05790 PF01757 Acyltransferase family DDE06_RS05800 PF03477 ATP cone domain DDE06_RS05800 PF13597 Anaerobic ribonucleoside-triphosphate reductase DDE06_RS05805 PF01263 Aldose 1-epimerase DDE06_RS05810 PF00196 Bacterial regulatory proteins, luxR family DDE06_RS05810 PF00072 Response regulator receiver domain DDE06_RS05820 PF00005 ABC transporter DDE06_RS05830 PF00005 ABC transporter DDE06_RS05840 PF07730 Histidine kinase DDE06_RS05845 PF00072 Response regulator receiver domain DDE06_RS05845 PF00196 Bacterial regulatory proteins, luxR family DDE06_RS05850 PF11898 Domain of unknown function (DUF3418) DDE06_RS05850 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DDE06_RS05850 PF00270 DEAD/DEAH box helicase DDE06_RS05850 PF00271 Helicase conserved C-terminal domain DDE06_RS05850 PF04408 Helicase associated domain (HA2) DDE06_RS05880 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05885 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS05900 PF01451 Low molecular weight phosphotyrosine protein phosphatase DDE06_RS05905 PF00268 Ribonucleotide reductase, small chain DDE06_RS05915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DDE06_RS05915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DDE06_RS05920 PF02867 Ribonucleotide reductase, barrel domain DDE06_RS05920 PF00317 Ribonucleotide reductase, all-alpha domain DDE06_RS05920 PF08343 Ribonucleotide reductase N-terminal DDE06_RS05925 PF07972 NrdI Flavodoxin like DDE06_RS05935 PF01475 Ferric uptake regulator family DDE06_RS05940 PF02664 S-Ribosylhomocysteinase (LuxS) DDE06_RS05945 PF01048 Phosphorylase superfamily DDE06_RS05950 PF01661 Macro domain DDE06_RS05955 PF00075 RNase H DDE06_RS05965 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DDE06_RS05965 PF00326 Prolyl oligopeptidase family DDE06_RS05975 PF00498 FHA domain DDE06_RS05975 PF01061 ABC-2 type transporter DDE06_RS05975 PF00005 ABC transporter DDE06_RS05980 PF16697 Inner membrane component of T3SS, cytoplasmic domain DDE06_RS05990 PF01098 Cell cycle protein DDE06_RS05995 PF00905 Penicillin binding protein transpeptidase domain DDE06_RS06000 PF00069 Protein kinase domain DDE06_RS06000 PF03793 PASTA domain DDE06_RS06005 PF04203 Sortase domain DDE06_RS06010 PF06781 Cell division protein CrgA DDE06_RS06015 PF01694 Rhomboid family DDE06_RS06020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DDE06_RS06050 PF12089 Transmembrane domain of unknown function (DUF3566) DDE06_RS06055 PF00521 DNA gyrase/topoisomerase IV, subunit A DDE06_RS06055 PF03989 DNA gyrase C-terminal domain, beta-propeller DDE06_RS06060 PF00204 DNA gyrase B DDE06_RS06060 PF00986 DNA gyrase B subunit, carboxyl terminus DDE06_RS06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS06060 PF01751 Toprim domain DDE06_RS06070 PF02463 RecF/RecN/SMC N terminal domain DDE06_RS06075 PF02768 DNA polymerase III beta subunit, C-terminal domain DDE06_RS06075 PF02767 DNA polymerase III beta subunit, central domain DDE06_RS06075 PF00712 DNA polymerase III beta subunit, N-terminal domain DDE06_RS06080 PF00308 Bacterial dnaA protein DDE06_RS06080 PF08299 Bacterial dnaA protein helix-turn-helix DDE06_RS06085 PF00468 Ribosomal protein L34 DDE06_RS06090 PF00825 Ribonuclease P DDE06_RS06095 PF01809 Putative membrane protein insertion efficiency factor DDE06_RS06100 PF02096 60Kd inner membrane protein DDE06_RS06110 PF02527 rRNA small subunit methyltransferase G DDE06_RS06115 PF13614 AAA domain DDE06_RS06120 PF02195 ParB-like nuclease domain DDE06_RS06120 PF17762 HTH domain found in ParB protein DDE06_RS06125 PF07478 D-ala D-ala ligase C-terminus DDE06_RS06125 PF01820 D-ala D-ala ligase N-terminus DDE06_RS06130 PF00155 Aminotransferase class I and II DDE06_RS06135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS06150 PF00293 NUDIX domain DDE06_RS06155 PF12627 Probable RNA and SrmB- binding site of polymerase A DDE06_RS06155 PF01743 Poly A polymerase head domain DDE06_RS06155 PF13735 tRNA nucleotidyltransferase domain 2 putative DDE06_RS06160 PF07690 Major Facilitator Superfamily DDE06_RS06165 PF01594 AI-2E family transporter DDE06_RS06170 PF00905 Penicillin binding protein transpeptidase domain DDE06_RS06170 PF00912 Transglycosylase DDE06_RS06175 PF01250 Ribosomal protein S6 DDE06_RS06180 PF00436 Single-strand binding protein family DDE06_RS06185 PF01084 Ribosomal protein S18 DDE06_RS06190 PF01281 Ribosomal protein L9, N-terminal domain DDE06_RS06190 PF03948 Ribosomal protein L9, C-terminal domain DDE06_RS06195 PF00149 Calcineurin-like phosphoesterase DDE06_RS06195 PF02872 5'-nucleotidase, C-terminal domain DDE06_RS06210 PF00772 DnaB-like helicase N terminal domain DDE06_RS06210 PF03796 DnaB-like helicase C terminal domain DDE06_RS06215 PF07690 Major Facilitator Superfamily DDE06_RS06225 PF00899 ThiF family DDE06_RS06240 PF08543 Phosphomethylpyrimidine kinase DDE06_RS06245 PF00248 Aldo/keto reductase family DDE06_RS06250 PF00561 alpha/beta hydrolase fold DDE06_RS06265 PF00585 C-terminal regulatory domain of Threonine dehydratase DDE06_RS06265 PF00291 Pyridoxal-phosphate dependent enzyme DDE06_RS06285 PF01712 Deoxynucleoside kinase DDE06_RS06295 PF01702 Queuine tRNA-ribosyltransferase DDE06_RS06300 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS06300 PF00672 HAMP domain DDE06_RS06300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS06305 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS06305 PF00072 Response regulator receiver domain DDE06_RS06320 PF00005 ABC transporter DDE06_RS06325 PF02687 FtsX-like permease family DDE06_RS06325 PF12704 MacB-like periplasmic core domain DDE06_RS06355 PF02386 Cation transport protein DDE06_RS06370 PF08482 ATP-dependent helicase C-terminal DDE06_RS06370 PF00270 DEAD/DEAH box helicase DDE06_RS06370 PF04408 Helicase associated domain (HA2) DDE06_RS06370 PF00271 Helicase conserved C-terminal domain DDE06_RS06385 PF05958 tRNA (Uracil-5-)-methyltransferase DDE06_RS06415 PF01661 Macro domain DDE06_RS06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS06450 PF01791 DeoC/LacD family aldolase DDE06_RS06460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DDE06_RS06460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DDE06_RS06465 PF04198 Putative sugar-binding domain DDE06_RS06470 PF13407 Periplasmic binding protein domain DDE06_RS06475 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS06480 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS06485 PF00005 ABC transporter DDE06_RS06490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DDE06_RS06490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DDE06_RS06495 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain DDE06_RS06495 PF01113 Dihydrodipicolinate reductase, N-terminus DDE06_RS06515 PF00939 Sodium:sulfate symporter transmembrane region DDE06_RS06530 PF02361 Cobalt transport protein DDE06_RS06535 PF00005 ABC transporter DDE06_RS06540 PF08021 Siderophore-interacting FAD-binding domain DDE06_RS06540 PF04954 Siderophore-interacting protein DDE06_RS06540 PF00664 ABC transporter transmembrane region DDE06_RS06540 PF00005 ABC transporter DDE06_RS06545 PF00005 ABC transporter DDE06_RS06565 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DDE06_RS06565 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DDE06_RS06570 PF01636 Phosphotransferase enzyme family DDE06_RS06575 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain DDE06_RS06575 PF17386 Lacto-N-biose phosphorylase C-terminal domain DDE06_RS06575 PF17385 Lacto-N-biose phosphorylase central domain DDE06_RS06580 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06585 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06595 PF00480 ROK family DDE06_RS06600 PF00480 ROK family DDE06_RS06605 PF00005 ABC transporter DDE06_RS06605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS06610 PF12911 N-terminal TM domain of oligopeptide transport permease C DDE06_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06625 PF00480 ROK family DDE06_RS06640 PF03932 CutC family DDE06_RS06655 PF02614 Glucuronate isomerase DDE06_RS06660 PF03480 Bacterial extracellular solute-binding protein, family 7 DDE06_RS06665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DDE06_RS06665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DDE06_RS06670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DDE06_RS06675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DDE06_RS06675 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DDE06_RS06680 PF01497 Periplasmic binding protein DDE06_RS06685 PF01032 FecCD transport family DDE06_RS06690 PF01032 FecCD transport family DDE06_RS06695 PF00005 ABC transporter DDE06_RS06700 PF00171 Aldehyde dehydrogenase family DDE06_RS06705 PF00205 Thiamine pyrophosphate enzyme, central domain DDE06_RS06705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DDE06_RS06705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DDE06_RS06710 PF04962 KduI/IolB family DDE06_RS06720 PF00294 pfkB family carbohydrate kinase DDE06_RS06730 PF00923 Transaldolase/Fructose-6-phosphate aldolase DDE06_RS06735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DDE06_RS06735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DDE06_RS06740 PF01261 Xylose isomerase-like TIM barrel DDE06_RS06745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DDE06_RS06745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DDE06_RS06750 PF00005 ABC transporter DDE06_RS06755 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS06760 PF13407 Periplasmic binding protein domain DDE06_RS06765 PF00459 Inositol monophosphatase family DDE06_RS06770 PF07690 Major Facilitator Superfamily DDE06_RS06775 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS06780 PF08240 Alcohol dehydrogenase GroES-like domain DDE06_RS06780 PF00107 Zinc-binding dehydrogenase DDE06_RS06800 PF00005 ABC transporter DDE06_RS06805 PF00005 ABC transporter DDE06_RS06805 PF00664 ABC transporter transmembrane region DDE06_RS06810 PF00664 ABC transporter transmembrane region DDE06_RS06810 PF00005 ABC transporter DDE06_RS06815 PF17932 Tetracyclin repressor-like, C-terminal domain DDE06_RS06815 PF00440 Bacterial regulatory proteins, tetR family DDE06_RS06820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DDE06_RS06820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DDE06_RS06820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DDE06_RS06820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DDE06_RS06825 PF13088 BNR repeat-like domain DDE06_RS06825 PF00754 F5/8 type C domain DDE06_RS06825 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DDE06_RS06835 PF00403 Heavy-metal-associated domain DDE06_RS06840 PF00403 Heavy-metal-associated domain DDE06_RS06840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DDE06_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS06850 PF09335 SNARE associated Golgi protein DDE06_RS06855 PF08328 Adenylosuccinate lyase C-terminal DDE06_RS06855 PF00206 Lyase DDE06_RS06860 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DDE06_RS06865 PF00155 Aminotransferase class I and II DDE06_RS06870 PF14256 YwiC-like protein DDE06_RS06880 PF01487 Type I 3-dehydroquinase DDE06_RS06890 PF00248 Aldo/keto reductase family DDE06_RS06895 PF00762 Ferrochelatase DDE06_RS06900 PF01066 CDP-alcohol phosphatidyltransferase DDE06_RS06910 PF00884 Sulfatase DDE06_RS06915 PF00884 Sulfatase DDE06_RS06925 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS06960 PF01032 FecCD transport family DDE06_RS06965 PF00005 ABC transporter DDE06_RS06995 PF16555 Gram-positive pilin subunit D1, N-terminal domain DDE06_RS06995 PF00746 LPXTG cell wall anchor motif DDE06_RS07010 PF00300 Histidine phosphatase superfamily (branch 1) DDE06_RS07020 PF01895 PhoU domain DDE06_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS07025 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS07030 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS07030 PF00072 Response regulator receiver domain DDE06_RS07035 PF02559 CarD-like/TRCF domain DDE06_RS07040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DDE06_RS07045 PF02542 YgbB family DDE06_RS07065 PF03611 PTS system sugar-specific permease component DDE06_RS07070 PF00596 Class II Aldolase and Adducin N-terminal domain DDE06_RS07080 PF02733 Dak1 domain DDE06_RS07090 PF04198 Putative sugar-binding domain DDE06_RS07105 PF00005 ABC transporter DDE06_RS07115 PF01406 tRNA synthetases class I (C) catalytic domain DDE06_RS07115 PF09190 DALR domain DDE06_RS07120 PF08032 RNA 2'-O ribose methyltransferase substrate binding DDE06_RS07120 PF00588 SpoU rRNA Methylase family DDE06_RS07135 PF00860 Permease family DDE06_RS07160 PF02554 Carbon starvation protein CstA DDE06_RS07160 PF13722 5TM C-terminal transporter carbon starvation CstA DDE06_RS07170 PF12169 DNA polymerase III subunits gamma and tau domain III DDE06_RS07175 PF02132 RecR protein DDE06_RS07175 PF13662 Toprim domain DDE06_RS07180 PF13840 ACT domain DDE06_RS07180 PF01842 ACT domain DDE06_RS07180 PF00696 Amino acid kinase family DDE06_RS07185 PF01118 Semialdehyde dehydrogenase, NAD binding domain DDE06_RS07185 PF02774 Semialdehyde dehydrogenase, dimerisation domain DDE06_RS07200 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS07210 PF13416 Bacterial extracellular solute-binding protein DDE06_RS07220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DDE06_RS07220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DDE06_RS07230 PF17912 MalK OB fold domain DDE06_RS07230 PF00005 ABC transporter DDE06_RS07235 PF00400 WD domain, G-beta repeat DDE06_RS07235 PF00069 Protein kinase domain DDE06_RS07255 PF00005 ABC transporter DDE06_RS07280 PF03167 Uracil DNA glycosylase superfamily DDE06_RS07295 PF00118 TCP-1/cpn60 chaperonin family DDE06_RS07310 PF00106 short chain dehydrogenase DDE06_RS07315 PF01553 Acyltransferase DDE06_RS07315 PF00501 AMP-binding enzyme DDE06_RS07320 PF00672 HAMP domain DDE06_RS07320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS07320 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS07325 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS07325 PF00072 Response regulator receiver domain DDE06_RS07335 PF04012 PspA/IM30 family DDE06_RS07345 PF00313 'Cold-shock' DNA-binding domain DDE06_RS07350 PF11228 Protein of unknown function (DUF3027) DDE06_RS07355 PF01238 Phosphomannose isomerase type I DDE06_RS07360 PF00860 Permease family DDE06_RS07365 PF00266 Aminotransferase class-V DDE06_RS07375 PF01325 Iron dependent repressor, N-terminal DNA binding domain DDE06_RS07375 PF02742 Iron dependent repressor, metal binding and dimerisation domain DDE06_RS07375 PF18357 Diphteria toxin repressor SH3 domain DDE06_RS07380 PF00877 NlpC/P60 family DDE06_RS07380 PF01476 LysM domain DDE06_RS07385 PF00582 Universal stress protein family DDE06_RS07420 PF03453 MoeA N-terminal region (domain I and II) DDE06_RS07420 PF03454 MoeA C-terminal region (domain IV) DDE06_RS07420 PF00994 Probable molybdopterin binding domain DDE06_RS07445 PF01381 Helix-turn-helix DDE06_RS07450 PF05973 Phage derived protein Gp49-like (DUF891) DDE06_RS07465 PF12697 Alpha/beta hydrolase family DDE06_RS07480 PF01497 Periplasmic binding protein DDE06_RS07485 PF01032 FecCD transport family DDE06_RS07490 PF01032 FecCD transport family DDE06_RS07495 PF00005 ABC transporter DDE06_RS07500 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS07500 PF07702 UTRA domain DDE06_RS07505 PF07859 alpha/beta hydrolase fold DDE06_RS07510 PF00083 Sugar (and other) transporter DDE06_RS07525 PF00830 Ribosomal L28 family DDE06_RS07530 PF00471 Ribosomal protein L33 DDE06_RS07535 PF00253 Ribosomal protein S14p/S29e DDE06_RS07540 PF01197 Ribosomal protein L31 DDE06_RS07545 PF00444 Ribosomal protein L36 DDE06_RS07555 PF07690 Major Facilitator Superfamily DDE06_RS07565 PF05167 Uncharacterised ACR (DUF711) DDE06_RS07570 PF00027 Cyclic nucleotide-binding domain DDE06_RS07570 PF00005 ABC transporter DDE06_RS07585 PF00367 phosphotransferase system, EIIB DDE06_RS07585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DDE06_RS07585 PF02378 Phosphotransferase system, EIIC DDE06_RS07590 PF00874 PRD domain DDE06_RS07590 PF03123 CAT RNA binding domain DDE06_RS07600 PF02896 PEP-utilising enzyme, TIM barrel domain DDE06_RS07600 PF05524 PEP-utilising enzyme, N-terminal DDE06_RS07600 PF00391 PEP-utilising enzyme, mobile domain DDE06_RS07610 PF00293 NUDIX domain DDE06_RS07630 PF02378 Phosphotransferase system, EIIC DDE06_RS07630 PF00367 phosphotransferase system, EIIB DDE06_RS07635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DDE06_RS07640 PF00381 PTS HPr component phosphorylation site DDE06_RS07660 PF02589 LUD domain DDE06_RS07665 PF11870 Domain of unknown function (DUF3390) DDE06_RS07665 PF13183 4Fe-4S dicluster domain DDE06_RS07665 PF02589 LUD domain DDE06_RS07670 PF02754 Cysteine-rich domain DDE06_RS07675 PF02652 L-lactate permease DDE06_RS07680 PF00152 tRNA synthetases class II (D, K and N) DDE06_RS07680 PF09924 Uncharacterised conserved protein (DUF2156) DDE06_RS07680 PF16995 Transmembrane region of lysyl-tRNA synthetase DDE06_RS07680 PF01336 OB-fold nucleic acid binding domain DDE06_RS07695 PF01594 AI-2E family transporter DDE06_RS07700 PF02028 BCCT, betaine/carnitine/choline family transporter DDE06_RS07705 PF05175 Methyltransferase small domain DDE06_RS07720 PF00005 ABC transporter DDE06_RS07720 PF13732 Domain of unknown function (DUF4162) DDE06_RS07740 PF01053 Cys/Met metabolism PLP-dependent enzyme DDE06_RS07745 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DDE06_RS07745 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DDE06_RS07755 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DDE06_RS07760 PF00857 Isochorismatase family DDE06_RS07785 PF12671 Putative amidase domain DDE06_RS07795 PF09334 tRNA synthetases class I (M) DDE06_RS07800 PF01026 TatD related DNase DDE06_RS07810 PF00398 Ribosomal RNA adenine dimethylase DDE06_RS07815 PF00288 GHMP kinases N terminal domain DDE06_RS07815 PF08544 GHMP kinases C terminal DDE06_RS07820 PF00005 ABC transporter DDE06_RS07820 PF16326 ABC transporter C-terminal domain DDE06_RS07820 PF12848 ABC transporter DDE06_RS07835 PF00005 ABC transporter DDE06_RS07835 PF13732 Domain of unknown function (DUF4162) DDE06_RS07850 PF00440 Bacterial regulatory proteins, tetR family DDE06_RS07860 PF12804 MobA-like NTP transferase domain DDE06_RS07860 PF00132 Bacterial transferase hexapeptide (six repeats) DDE06_RS07865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DDE06_RS07865 PF14572 Phosphoribosyl synthetase-associated domain DDE06_RS07870 PF01386 Ribosomal L25p family DDE06_RS07870 PF14693 Ribosomal protein TL5, C-terminal domain DDE06_RS07875 PF01195 Peptidyl-tRNA hydrolase DDE06_RS07880 PF17757 UvrB interaction domain DDE06_RS07880 PF00270 DEAD/DEAH box helicase DDE06_RS07880 PF03461 TRCF domain DDE06_RS07880 PF00271 Helicase conserved C-terminal domain DDE06_RS07880 PF02559 CarD-like/TRCF domain DDE06_RS07885 PF01156 Inosine-uridine preferring nucleoside hydrolase DDE06_RS07890 PF00113 Enolase, C-terminal TIM barrel domain DDE06_RS07890 PF03952 Enolase, N-terminal domain DDE06_RS07905 PF02541 Ppx/GppA phosphatase family DDE06_RS07925 PF00005 ABC transporter DDE06_RS07935 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS07940 PF00005 ABC transporter DDE06_RS07955 PF00171 Aldehyde dehydrogenase family DDE06_RS07960 PF00474 Sodium:solute symporter family DDE06_RS07975 PF01625 Peptide methionine sulfoxide reductase DDE06_RS07980 PF03449 Transcription elongation factor, N-terminal DDE06_RS07980 PF01272 Transcription elongation factor, GreA/GreB, C-term DDE06_RS07985 PF02585 GlcNAc-PI de-N-acetylase DDE06_RS07990 PF03006 Haemolysin-III related DDE06_RS07995 PF01255 Putative undecaprenyl diphosphate synthase DDE06_RS08000 PF00294 pfkB family carbohydrate kinase DDE06_RS08005 PF02609 Exonuclease VII small subunit DDE06_RS08010 PF02601 Exonuclease VII, large subunit DDE06_RS08010 PF13742 OB-fold nucleic acid binding domain DDE06_RS08015 PF02401 LytB protein DDE06_RS08030 PF00005 ABC transporter DDE06_RS08045 PF03193 RsgA GTPase DDE06_RS08050 PF02646 RmuC family DDE06_RS08055 PF01926 50S ribosome-binding GTPase DDE06_RS08055 PF06071 Protein of unknown function (DUF933) DDE06_RS08085 PF07690 Major Facilitator Superfamily DDE06_RS08085 PF00083 Sugar (and other) transporter DDE06_RS08090 PF07687 Peptidase dimerisation domain DDE06_RS08090 PF01546 Peptidase family M20/M25/M40 DDE06_RS08095 PF07690 Major Facilitator Superfamily DDE06_RS08100 PF00128 Alpha amylase, catalytic domain DDE06_RS08105 PF13416 Bacterial extracellular solute-binding protein DDE06_RS08110 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08120 PF00128 Alpha amylase, catalytic domain DDE06_RS08120 PF02903 Alpha amylase, N-terminal ig-like domain DDE06_RS08120 PF16657 Maltogenic Amylase, C-terminal domain DDE06_RS08125 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS08135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DDE06_RS08135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DDE06_RS08140 PF00696 Amino acid kinase family DDE06_RS08155 PF08946 Osmosensory transporter coiled coil DDE06_RS08155 PF00083 Sugar (and other) transporter DDE06_RS08160 PF00440 Bacterial regulatory proteins, tetR family DDE06_RS08165 PF03358 NADPH-dependent FMN reductase DDE06_RS08170 PF00268 Ribonucleotide reductase, small chain DDE06_RS08175 PF07972 NrdI Flavodoxin like DDE06_RS08200 PF01741 Large-conductance mechanosensitive channel, MscL DDE06_RS08205 PF01327 Polypeptide deformylase DDE06_RS08215 PF01226 Formate/nitrite transporter DDE06_RS08220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DDE06_RS08225 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08230 PF12911 N-terminal TM domain of oligopeptide transport permease C DDE06_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08235 PF00005 ABC transporter DDE06_RS08235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS08240 PF00005 ABC transporter DDE06_RS08270 PF08402 TOBE domain DDE06_RS08270 PF00005 ABC transporter DDE06_RS08275 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08295 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS08300 PF00480 ROK family DDE06_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08310 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08320 PF01055 Glycosyl hydrolases family 31 DDE06_RS08320 PF13802 Galactose mutarotase-like DDE06_RS08325 PF00128 Alpha amylase, catalytic domain DDE06_RS08330 PF01206 Sulfurtransferase TusA DDE06_RS08335 PF04143 Sulphur transport DDE06_RS08340 PF03971 Monomeric isocitrate dehydrogenase DDE06_RS08355 PF02127 Aminopeptidase I zinc metalloprotease (M18) DDE06_RS08360 PF00501 AMP-binding enzyme DDE06_RS08360 PF13193 AMP-binding enzyme C-terminal domain DDE06_RS08365 PF04055 Radical SAM superfamily DDE06_RS08370 PF03099 Biotin/lipoate A/B protein ligase family DDE06_RS08375 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08380 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS08380 PF12911 N-terminal TM domain of oligopeptide transport permease C DDE06_RS08385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DDE06_RS08385 PF00005 ABC transporter DDE06_RS08390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DDE06_RS08395 PF00005 ABC transporter DDE06_RS08395 PF00664 ABC transporter transmembrane region DDE06_RS08400 PF00664 ABC transporter transmembrane region DDE06_RS08400 PF00005 ABC transporter DDE06_RS08410 PF03144 Elongation factor Tu domain 2 DDE06_RS08410 PF00009 Elongation factor Tu GTP binding domain DDE06_RS08410 PF14492 Elongation Factor G, domain II DDE06_RS08410 PF00679 Elongation factor G C-terminus DDE06_RS08425 PF00037 4Fe-4S binding domain DDE06_RS08430 PF00155 Aminotransferase class I and II DDE06_RS08435 PF00285 Citrate synthase, C-terminal domain DDE06_RS08445 PF02545 Maf-like protein DDE06_RS08455 PF00211 Adenylate and Guanylate cyclase catalytic domain DDE06_RS08455 PF16701 Adenylate cyclase regulatory domain DDE06_RS08460 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS08460 PF00072 Response regulator receiver domain DDE06_RS08465 PF00672 HAMP domain DDE06_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS08465 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS08475 PF03816 Cell envelope-related transcriptional attenuator domain DDE06_RS08480 PF03816 Cell envelope-related transcriptional attenuator domain DDE06_RS08485 PF00534 Glycosyl transferases group 1 DDE06_RS08485 PF00535 Glycosyl transferase family 2 DDE06_RS08495 PF16363 GDP-mannose 4,6 dehydratase DDE06_RS08510 PF00132 Bacterial transferase hexapeptide (six repeats) DDE06_RS08515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DDE06_RS08520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DDE06_RS08520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DDE06_RS08555 PF02350 UDP-N-acetylglucosamine 2-epimerase DDE06_RS08570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DDE06_RS08570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DDE06_RS08570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DDE06_RS08580 PF00005 ABC transporter DDE06_RS08580 PF14524 Wzt C-terminal domain DDE06_RS08590 PF00535 Glycosyl transferase family 2 DDE06_RS08590 PF00534 Glycosyl transferases group 1 DDE06_RS08610 PF04321 RmlD substrate binding domain DDE06_RS08615 PF00483 Nucleotidyl transferase DDE06_RS08620 PF01758 Sodium Bile acid symporter family DDE06_RS08630 PF00459 Inositol monophosphatase family DDE06_RS08635 PF02467 Transcription factor WhiB DDE06_RS08640 PF00534 Glycosyl transferases group 1 DDE06_RS08640 PF00535 Glycosyl transferase family 2 DDE06_RS08675 PF07726 ATPase family associated with various cellular activities (AAA) DDE06_RS08675 PF17863 AAA lid domain DDE06_RS08695 PF00072 Response regulator receiver domain DDE06_RS08695 PF00486 Transcriptional regulatory protein, C terminal DDE06_RS08700 PF00672 HAMP domain DDE06_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS08700 PF00512 His Kinase A (phospho-acceptor) domain DDE06_RS08705 PF10646 Sporulation and spore germination DDE06_RS08705 PF10647 Lipoprotein LpqB beta-propeller domain DDE06_RS08710 PF00156 Phosphoribosyl transferase domain DDE06_RS08715 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DDE06_RS08715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DDE06_RS08720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS08725 PF04461 Protein of unknown function (DUF520) DDE06_RS08745 PF00471 Ribosomal protein L33 DDE06_RS08760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DDE06_RS08760 PF01565 FAD binding domain DDE06_RS08775 PF00962 Adenosine/AMP deaminase DDE06_RS08785 PF00155 Aminotransferase class I and II DDE06_RS08795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DDE06_RS08800 PF02357 Transcription termination factor nusG DDE06_RS08805 PF00298 Ribosomal protein L11, RNA binding domain DDE06_RS08805 PF03946 Ribosomal protein L11, N-terminal domain DDE06_RS08810 PF00687 Ribosomal protein L1p/L10e family DDE06_RS08815 PF00485 Phosphoribulokinase / Uridine kinase family DDE06_RS08820 PF00466 Ribosomal protein L10 DDE06_RS08825 PF00542 Ribosomal protein L7/L12 C-terminal domain DDE06_RS08825 PF16320 Ribosomal protein L7/L12 dimerisation domain DDE06_RS08830 PF04561 RNA polymerase Rpb2, domain 2 DDE06_RS08830 PF04565 RNA polymerase Rpb2, domain 3 DDE06_RS08830 PF04560 RNA polymerase Rpb2, domain 7 DDE06_RS08830 PF04563 RNA polymerase beta subunit DDE06_RS08830 PF00562 RNA polymerase Rpb2, domain 6 DDE06_RS08830 PF10385 RNA polymerase beta subunit external 1 domain DDE06_RS08835 PF04998 RNA polymerase Rpb1, domain 5 DDE06_RS08835 PF04997 RNA polymerase Rpb1, domain 1 DDE06_RS08835 PF05000 RNA polymerase Rpb1, domain 4 DDE06_RS08835 PF00623 RNA polymerase Rpb1, domain 2 DDE06_RS08835 PF04983 RNA polymerase Rpb1, domain 3 DDE06_RS08840 PF00324 Amino acid permease DDE06_RS08845 PF00164 Ribosomal protein S12/S23 DDE06_RS08850 PF00177 Ribosomal protein S7p/S5e DDE06_RS08855 PF14492 Elongation Factor G, domain II DDE06_RS08855 PF00679 Elongation factor G C-terminus DDE06_RS08855 PF03764 Elongation factor G, domain IV DDE06_RS08855 PF03144 Elongation factor Tu domain 2 DDE06_RS08855 PF00009 Elongation factor Tu GTP binding domain DDE06_RS08860 PF03144 Elongation factor Tu domain 2 DDE06_RS08860 PF03143 Elongation factor Tu C-terminal domain DDE06_RS08860 PF00009 Elongation factor Tu GTP binding domain DDE06_RS08865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DDE06_RS08865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DDE06_RS08870 PF13419 Haloacid dehalogenase-like hydrolase DDE06_RS08875 PF00338 Ribosomal protein S10p/S20e DDE06_RS08880 PF00297 Ribosomal protein L3 DDE06_RS08885 PF00573 Ribosomal protein L4/L1 family DDE06_RS08890 PF00276 Ribosomal protein L23 DDE06_RS08895 PF00181 Ribosomal Proteins L2, RNA binding domain DDE06_RS08895 PF03947 Ribosomal Proteins L2, C-terminal domain DDE06_RS08900 PF00203 Ribosomal protein S19 DDE06_RS08905 PF00237 Ribosomal protein L22p/L17e DDE06_RS08910 PF00189 Ribosomal protein S3, C-terminal domain DDE06_RS08910 PF07650 KH domain DDE06_RS08915 PF00252 Ribosomal protein L16p/L10e DDE06_RS08920 PF00831 Ribosomal L29 protein DDE06_RS08925 PF00366 Ribosomal protein S17 DDE06_RS08930 PF00238 Ribosomal protein L14p/L23e DDE06_RS08935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DDE06_RS08940 PF00673 ribosomal L5P family C-terminus DDE06_RS08940 PF00281 Ribosomal protein L5 DDE06_RS08945 PF00253 Ribosomal protein S14p/S29e DDE06_RS08950 PF00410 Ribosomal protein S8 DDE06_RS08955 PF00347 Ribosomal protein L6 DDE06_RS08960 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DDE06_RS08965 PF03719 Ribosomal protein S5, C-terminal domain DDE06_RS08965 PF00333 Ribosomal protein S5, N-terminal domain DDE06_RS08970 PF00327 Ribosomal protein L30p/L7e DDE06_RS08975 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DDE06_RS08980 PF00344 SecY translocase DDE06_RS08990 PF00557 Metallopeptidase family M24 DDE06_RS08995 PF01176 Translation initiation factor 1A / IF-1 DDE06_RS09000 PF00444 Ribosomal protein L36 DDE06_RS09005 PF00416 Ribosomal protein S13/S18 DDE06_RS09010 PF00411 Ribosomal protein S11 DDE06_RS09015 PF01000 RNA polymerase Rpb3/RpoA insert domain DDE06_RS09015 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DDE06_RS09015 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DDE06_RS09020 PF01196 Ribosomal protein L17 DDE06_RS09025 PF04461 Protein of unknown function (DUF520) DDE06_RS09035 PF13411 MerR HTH family regulatory protein DDE06_RS09035 PF07739 TipAS antibiotic-recognition domain DDE06_RS09040 PF00005 ABC transporter DDE06_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS09055 PF00480 ROK family DDE06_RS09060 PF01416 tRNA pseudouridine synthase DDE06_RS09070 PF03466 LysR substrate binding domain DDE06_RS09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DDE06_RS09080 PF12558 ATP-binding cassette cobalt transporter DDE06_RS09080 PF00005 ABC transporter DDE06_RS09085 PF07155 ECF-type riboflavin transporter, S component DDE06_RS09095 PF00572 Ribosomal protein L13 DDE06_RS09100 PF00380 Ribosomal protein S9/S16 DDE06_RS09105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DDE06_RS09105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DDE06_RS09105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DDE06_RS09105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DDE06_RS09110 PF00485 Phosphoribulokinase / Uridine kinase family DDE06_RS09115 PF01380 SIS domain DDE06_RS09120 PF03853 YjeF-related protein N-terminus DDE06_RS09120 PF01256 Carbohydrate kinase DDE06_RS09125 PF00842 Alanine racemase, C-terminal domain DDE06_RS09125 PF01168 Alanine racemase, N-terminal domain DDE06_RS09130 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DDE06_RS09140 PF00814 Glycoprotease family DDE06_RS09155 PF00890 FAD binding domain DDE06_RS09155 PF02910 Fumarate reductase flavoprotein C-term DDE06_RS09160 PF13183 4Fe-4S dicluster domain DDE06_RS09160 PF13085 2Fe-2S iron-sulfur cluster binding domain DDE06_RS09170 PF00209 Sodium:neurotransmitter symporter family DDE06_RS09175 PF00814 Glycoprotease family DDE06_RS09180 PF02535 ZIP Zinc transporter DDE06_RS09195 PF00166 Chaperonin 10 Kd subunit DDE06_RS09205 PF00731 AIR carboxylase DDE06_RS09210 PF01259 SAICAR synthetase DDE06_RS09215 PF00156 Phosphoribosyl transferase domain DDE06_RS09215 PF13537 Glutamine amidotransferase domain DDE06_RS09220 PF00586 AIR synthase related protein, N-terminal domain DDE06_RS09220 PF02769 AIR synthase related protein, C-terminal domain DDE06_RS09225 PF00551 Formyl transferase DDE06_RS09230 PF02844 Phosphoribosylglycinamide synthetase, N domain DDE06_RS09230 PF02843 Phosphoribosylglycinamide synthetase, C domain DDE06_RS09230 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DDE06_RS09235 PF00586 AIR synthase related protein, N-terminal domain DDE06_RS09235 PF02769 AIR synthase related protein, C-terminal domain DDE06_RS09235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DDE06_RS09245 PF02467 Transcription factor WhiB DDE06_RS09250 PF00478 IMP dehydrogenase / GMP reductase domain DDE06_RS09250 PF00571 CBS domain DDE06_RS09260 PF00478 IMP dehydrogenase / GMP reductase domain DDE06_RS09265 PF00206 Lyase DDE06_RS09265 PF10415 Fumarase C C-terminus DDE06_RS09275 PF00005 ABC transporter DDE06_RS09290 PF00871 Acetokinase family DDE06_RS09295 PF07085 DRTGG domain DDE06_RS09295 PF01515 Phosphate acetyl/butaryl transferase DDE06_RS09300 PF00849 RNA pseudouridylate synthase DDE06_RS09305 PF00958 GMP synthase C terminal domain DDE06_RS09305 PF00117 Glutamine amidotransferase class-I DDE06_RS09305 PF02540 NAD synthase DDE06_RS09320 PF02899 Phage integrase, N-terminal SAM-like domain DDE06_RS09320 PF00589 Phage integrase family DDE06_RS09355 PF04055 Radical SAM superfamily DDE06_RS09360 PF13542 Helix-turn-helix domain of transposase family ISL3 DDE06_RS09360 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DDE06_RS09360 PF01610 Transposase DDE06_RS09365 PF00665 Integrase core domain DDE06_RS09370 PF01695 IstB-like ATP binding protein DDE06_RS09385 PF12102 Domain of unknown function (DUF3578) DDE06_RS09385 PF07728 AAA domain (dynein-related subfamily) DDE06_RS09390 PF00009 Elongation factor Tu GTP binding domain DDE06_RS09390 PF03764 Elongation factor G, domain IV DDE06_RS09390 PF14492 Elongation Factor G, domain II DDE06_RS09390 PF00679 Elongation factor G C-terminus DDE06_RS09430 PF00877 NlpC/P60 family DDE06_RS09450 PF02534 Type IV secretory system Conjugative DNA transfer DDE06_RS09465 PF07319 Primosomal protein DnaI N-terminus DDE06_RS09465 PF01695 IstB-like ATP binding protein DDE06_RS09490 PF10437 Bacterial lipoate protein ligase C-terminus DDE06_RS09490 PF03099 Biotin/lipoate A/B protein ligase family DDE06_RS09510 PF01022 Bacterial regulatory protein, arsR family DDE06_RS09540 PF13361 UvrD-like helicase C-terminal domain DDE06_RS09540 PF00580 UvrD/REP helicase N-terminal domain DDE06_RS09545 PF01757 Acyltransferase family DDE06_RS09550 PF08442 ATP-grasp domain DDE06_RS09550 PF00549 CoA-ligase DDE06_RS09555 PF00549 CoA-ligase DDE06_RS09555 PF02629 CoA binding domain DDE06_RS09570 PF02142 MGS-like domain DDE06_RS09570 PF01808 AICARFT/IMPCHase bienzyme DDE06_RS09580 PF00365 Phosphofructokinase DDE06_RS09585 PF00342 Phosphoglucose isomerase DDE06_RS09605 PF08386 TAP-like protein DDE06_RS09605 PF00561 alpha/beta hydrolase fold DDE06_RS09630 PF13936 Helix-turn-helix domain DDE06_RS09630 PF00665 Integrase core domain DDE06_RS09635 PF13936 Helix-turn-helix domain DDE06_RS09635 PF00665 Integrase core domain DDE06_RS09650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DDE06_RS09650 PF00056 lactate/malate dehydrogenase, NAD binding domain DDE06_RS09670 PF07859 alpha/beta hydrolase fold DDE06_RS09675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DDE06_RS09675 PF02770 Acyl-CoA dehydrogenase, middle domain DDE06_RS09675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DDE06_RS09680 PF02515 CoA-transferase family III DDE06_RS09685 PF13193 AMP-binding enzyme C-terminal domain DDE06_RS09685 PF00501 AMP-binding enzyme DDE06_RS09690 PF01575 MaoC like domain DDE06_RS09695 PF00083 Sugar (and other) transporter DDE06_RS09700 PF00753 Metallo-beta-lactamase superfamily DDE06_RS09715 PF01012 Electron transfer flavoprotein domain DDE06_RS09715 PF00766 Electron transfer flavoprotein FAD-binding domain DDE06_RS09720 PF01494 FAD binding domain DDE06_RS09730 PF13088 BNR repeat-like domain DDE06_RS09730 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DDE06_RS09730 PF00754 F5/8 type C domain DDE06_RS09740 PF02785 Biotin carboxylase C-terminal domain DDE06_RS09740 PF00364 Biotin-requiring enzyme DDE06_RS09740 PF00289 Biotin carboxylase, N-terminal domain DDE06_RS09740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DDE06_RS09745 PF01039 Carboxyl transferase domain DDE06_RS09750 PF00698 Acyl transferase domain DDE06_RS09755 PF01648 4'-phosphopantetheinyl transferase superfamily DDE06_RS09760 PF02632 BioY family DDE06_RS09765 PF00551 Formyl transferase DDE06_RS09770 PF00464 Serine hydroxymethyltransferase DDE06_RS09775 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DDE06_RS09775 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DDE06_RS09790 PF01050 Mannose-6-phosphate isomerase DDE06_RS09790 PF00483 Nucleotidyl transferase DDE06_RS09795 PF02608 ABC transporter substrate-binding protein PnrA-like DDE06_RS09800 PF00005 ABC transporter DDE06_RS09805 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS09810 PF02653 Branched-chain amino acid transport system / permease component DDE06_RS09815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DDE06_RS09820 PF02885 Glycosyl transferase family, helical bundle domain DDE06_RS09820 PF00591 Glycosyl transferase family, a/b domain DDE06_RS09820 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DDE06_RS09830 PF01791 DeoC/LacD family aldolase DDE06_RS09835 PF07690 Major Facilitator Superfamily DDE06_RS09840 PF00440 Bacterial regulatory proteins, tetR family DDE06_RS09845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DDE06_RS09845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DDE06_RS09845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DDE06_RS09845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DDE06_RS09850 PF01048 Phosphorylase superfamily DDE06_RS09855 PF03641 Possible lysine decarboxylase DDE06_RS09865 PF01596 O-methyltransferase DDE06_RS09870 PF10609 NUBPL iron-transfer P-loop NTPase DDE06_RS09870 PF01883 Iron-sulfur cluster assembly protein DDE06_RS09880 PF03448 MgtE intracellular N domain DDE06_RS09880 PF01769 Divalent cation transporter DDE06_RS09880 PF00571 CBS domain DDE06_RS09885 PF00557 Metallopeptidase family M24 DDE06_RS09885 PF05195 Aminopeptidase P, N-terminal domain DDE06_RS09895 PF01914 MarC family integral membrane protein DDE06_RS09900 PF00271 Helicase conserved C-terminal domain DDE06_RS09900 PF00270 DEAD/DEAH box helicase DDE06_RS09915 PF13361 UvrD-like helicase C-terminal domain DDE06_RS09915 PF00580 UvrD/REP helicase N-terminal domain DDE06_RS09925 PF00437 Type II/IV secretion system protein DDE06_RS09960 PF03462 PCRF domain DDE06_RS09960 PF00472 RF-1 domain DDE06_RS09965 PF00005 ABC transporter DDE06_RS09970 PF02687 FtsX-like permease family DDE06_RS09970 PF18075 FtsX extracellular domain DDE06_RS09975 PF04225 Opacity-associated protein A LysM-like domain DDE06_RS09975 PF01551 Peptidase family M23 DDE06_RS09980 PF01668 SmpB protein DDE06_RS09985 PF13344 Haloacid dehalogenase-like hydrolase DDE06_RS09990 PF02016 LD-carboxypeptidase N-terminal domain DDE06_RS09990 PF17676 LD-carboxypeptidase C-terminal domain DDE06_RS10015 PF00005 ABC transporter DDE06_RS10015 PF17755 UvrA DNA-binding domain DDE06_RS10015 PF17760 UvrA interaction domain DDE06_RS10020 PF17760 UvrA interaction domain DDE06_RS10020 PF17755 UvrA DNA-binding domain DDE06_RS10025 PF01047 MarR family DDE06_RS10050 PF00082 Subtilase family DDE06_RS10050 PF06280 Fn3-like domain DDE06_RS10050 PF00746 LPXTG cell wall anchor motif DDE06_RS10050 PF02225 PA domain DDE06_RS10065 PF02540 NAD synthase DDE06_RS10080 PF06826 Predicted Permease Membrane Region DDE06_RS10080 PF02080 TrkA-C domain DDE06_RS10085 PF00216 Bacterial DNA-binding protein DDE06_RS10095 PF04851 Type III restriction enzyme, res subunit DDE06_RS10100 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DDE06_RS10100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DDE06_RS10105 PF02617 ATP-dependent Clp protease adaptor protein ClpS DDE06_RS10115 PF01177 Asp/Glu/Hydantoin racemase DDE06_RS10120 PF12706 Beta-lactamase superfamily domain DDE06_RS10125 PF03725 3' exoribonuclease family, domain 2 DDE06_RS10125 PF01138 3' exoribonuclease family, domain 1 DDE06_RS10130 PF01725 Ham1 family DDE06_RS10145 PF00578 AhpC/TSA family DDE06_RS10155 PF00501 AMP-binding enzyme DDE06_RS10160 PF01557 Fumarylacetoacetate (FAA) hydrolase family DDE06_RS10165 PF00155 Aminotransferase class I and II DDE06_RS10170 PF00749 tRNA synthetases class I (E and Q), catalytic domain DDE06_RS10180 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS10190 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS10215 PF01432 Peptidase family M3 DDE06_RS10225 PF06800 Sugar transport protein DDE06_RS10235 PF13439 Glycosyltransferase Family 4 DDE06_RS10235 PF00534 Glycosyl transferases group 1 DDE06_RS10245 PF03577 Peptidase family C69 DDE06_RS10255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DDE06_RS10260 PF01820 D-ala D-ala ligase N-terminus DDE06_RS10260 PF07478 D-ala D-ala ligase C-terminus DDE06_RS10265 PF03358 NADPH-dependent FMN reductase DDE06_RS10270 PF02769 AIR synthase related protein, C-terminal domain DDE06_RS10270 PF00586 AIR synthase related protein, N-terminal domain DDE06_RS10280 PF00830 Ribosomal L28 family DDE06_RS10285 PF00270 DEAD/DEAH box helicase DDE06_RS10285 PF00271 Helicase conserved C-terminal domain DDE06_RS10285 PF17191 RecG wedge domain DDE06_RS10295 PF01467 Cytidylyltransferase-like DDE06_RS10305 PF02620 Large ribosomal RNA subunit accumulation protein YceD DDE06_RS10310 PF14622 Ribonuclease-III-like DDE06_RS10310 PF00035 Double-stranded RNA binding motif DDE06_RS10315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DDE06_RS10315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DDE06_RS10315 PF06827 Zinc finger found in FPG and IleRS DDE06_RS10320 PF00072 Response regulator receiver domain DDE06_RS10320 PF00196 Bacterial regulatory proteins, luxR family DDE06_RS10325 PF13192 Thioredoxin domain DDE06_RS10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase DDE06_RS10330 PF10417 C-terminal domain of 1-Cys peroxiredoxin DDE06_RS10330 PF00578 AhpC/TSA family DDE06_RS10335 PF00664 ABC transporter transmembrane region DDE06_RS10335 PF00005 ABC transporter DDE06_RS10340 PF00005 ABC transporter DDE06_RS10340 PF00664 ABC transporter transmembrane region DDE06_RS10345 PF07730 Histidine kinase DDE06_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DDE06_RS10345 PF13185 GAF domain DDE06_RS10350 PF00664 ABC transporter transmembrane region DDE06_RS10350 PF00005 ABC transporter DDE06_RS10355 PF00005 ABC transporter DDE06_RS10355 PF00664 ABC transporter transmembrane region DDE06_RS10360 PF02322 Cytochrome bd terminal oxidase subunit II DDE06_RS10365 PF01654 Cytochrome bd terminal oxidase subunit I DDE06_RS10375 PF10150 Ribonuclease E/G family DDE06_RS10380 PF00829 Ribosomal prokaryotic L21 protein DDE06_RS10385 PF01016 Ribosomal L27 protein DDE06_RS10390 PF01926 50S ribosome-binding GTPase DDE06_RS10390 PF01018 GTP1/OBG DDE06_RS10390 PF09269 Domain of unknown function (DUF1967) DDE06_RS10400 PF00085 Thioredoxin DDE06_RS10405 PF01467 Cytidylyltransferase-like DDE06_RS10420 PF00300 Histidine phosphatase superfamily (branch 1) DDE06_RS10445 PF02952 L-fucose isomerase, C-terminal domain DDE06_RS10445 PF07881 L-fucose isomerase, first N-terminal domain DDE06_RS10445 PF07882 L-fucose isomerase, second N-terminal domain DDE06_RS10455 PF00596 Class II Aldolase and Adducin N-terminal domain DDE06_RS10460 PF07690 Major Facilitator Superfamily DDE06_RS10465 PF05025 RbsD / FucU transport protein family DDE06_RS10470 PF00356 Bacterial regulatory proteins, lacI family DDE06_RS10475 PF00291 Pyridoxal-phosphate dependent enzyme DDE06_RS10480 PF01522 Polysaccharide deacetylase DDE06_RS10500 PF16555 Gram-positive pilin subunit D1, N-terminal domain DDE06_RS10500 PF00746 LPXTG cell wall anchor motif DDE06_RS10525 PF00392 Bacterial regulatory proteins, gntR family DDE06_RS10530 PF01680 SOR/SNZ family DDE06_RS10540 PF16325 Peptidase family U32 C-terminal domain DDE06_RS10540 PF01136 Peptidase family U32 DDE06_RS10545 PF03591 AzlC protein DDE06_RS10555 PF00324 Amino acid permease DDE06_RS10560 PF03180 NLPA lipoprotein DDE06_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component DDE06_RS10570 PF09383 NIL domain DDE06_RS10570 PF00005 ABC transporter DDE06_RS10575 PF05681 Fumarate hydratase (Fumerase) DDE06_RS10575 PF05683 Fumarase C-terminus DDE06_RS10580 PF00324 Amino acid permease DDE06_RS10590 PF01381 Helix-turn-helix DDE06_RS10600 PF01569 PAP2 superfamily DDE06_RS10610 PF00294 pfkB family carbohydrate kinase DDE06_RS10615 PF00950 ABC 3 transport family DDE06_RS10620 PF00005 ABC transporter DDE06_RS10630 PF01297 Zinc-uptake complex component A periplasmic DDE06_RS10640 PF01022 Bacterial regulatory protein, arsR family DDE06_RS10650 PF00265 Thymidine kinase DDE06_RS10655 PF02742 Iron dependent repressor, metal binding and dimerisation domain DDE06_RS10655 PF00950 ABC 3 transport family DDE06_RS10660 PF01048 Phosphorylase superfamily DDE06_RS10665 PF01594 AI-2E family transporter DDE06_RS10680 PF01230 HIT domain DDE06_RS10685 PF09334 tRNA synthetases class I (M) DDE06_RS10685 PF13603 Leucyl-tRNA synthetase, Domain 2 DDE06_RS10685 PF08264 Anticodon-binding domain of tRNA DDE06_RS10700 PF05872 Bacterial protein of unknown function (DUF853) DDE06_RS10720 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DDE06_RS10720 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DDE06_RS10720 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DDE06_RS10725 PF02233 NAD(P) transhydrogenase beta subunit DDE06_RS10730 PF01649 Ribosomal protein S20 DDE06_RS10755 PF06421 GTP-binding protein LepA C-terminus DDE06_RS10755 PF00679 Elongation factor G C-terminus DDE06_RS10755 PF00009 Elongation factor Tu GTP binding domain DDE06_RS10760 PF02390 Putative methyltransferase DDE06_RS10765 PF04055 Radical SAM superfamily DDE06_RS10780 PF08220 DeoR-like helix-turn-helix domain DDE06_RS10780 PF01628 HrcA protein C terminal domain DDE06_RS10785 PF00226 DnaJ domain DDE06_RS10785 PF01556 DnaJ C terminal domain DDE06_RS10785 PF00684 DnaJ central domain DDE06_RS10790 PF04452 RNA methyltransferase