locus-tag class description DC090_RS00010 PF00005 ABC transporter DC090_RS00020 PF06574 FAD synthetase DC090_RS00020 PF01687 Riboflavin kinase DC090_RS00040 PF00005 ABC transporter DC090_RS00040 PF08402 TOBE domain DC090_RS00050 PF07690 Major Facilitator Superfamily DC090_RS00055 PF00072 Response regulator receiver domain DC090_RS00055 PF00486 Transcriptional regulatory protein, C terminal DC090_RS00060 PF00989 PAS fold DC090_RS00060 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS00065 PF01509 TruB family pseudouridylate synthase (N terminal domain) DC090_RS00065 PF16198 tRNA pseudouridylate synthase B C-terminal domain DC090_RS00065 PF09142 tRNA Pseudouridine synthase II, C terminal DC090_RS00070 PF02033 Ribosome-binding factor A DC090_RS00075 PF00009 Elongation factor Tu GTP binding domain DC090_RS00075 PF11987 Translation-initiation factor 2 DC090_RS00075 PF04760 Translation initiation factor IF-2, N-terminal region DC090_RS00085 PF08529 NusA N-terminal domain DC090_RS00085 PF13184 NusA-like KH domain DC090_RS00090 PF17384 RimP C-terminal SH3 domain DC090_RS00090 PF02576 RimP N-terminal domain DC090_RS00100 PF03129 Anticodon binding domain DC090_RS00100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DC090_RS00100 PF04073 Aminoacyl-tRNA editing domain DC090_RS00110 PF04551 GcpE protein DC090_RS00115 PF02163 Peptidase family M50 DC090_RS00115 PF17820 PDZ domain DC090_RS00120 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DC090_RS00120 PF13288 DXP reductoisomerase C-terminal domain DC090_RS00120 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DC090_RS00130 PF04055 Radical SAM superfamily DC090_RS00140 PF01765 Ribosome recycling factor DC090_RS00145 PF00696 Amino acid kinase family DC090_RS00155 PF07690 Major Facilitator Superfamily DC090_RS00165 PF01494 FAD binding domain DC090_RS00170 PF01012 Electron transfer flavoprotein domain DC090_RS00170 PF00766 Electron transfer flavoprotein FAD-binding domain DC090_RS00175 PF01012 Electron transfer flavoprotein domain DC090_RS00180 PF00889 Elongation factor TS DC090_RS00185 PF00318 Ribosomal protein S2 DC090_RS00190 PF03458 UPF0126 domain DC090_RS00195 PF01551 Peptidase family M23 DC090_RS00200 PF02899 Phage integrase, N-terminal SAM-like domain DC090_RS00200 PF00589 Phage integrase family DC090_RS00205 PF02481 DNA recombination-mediator protein A DC090_RS00205 PF17782 DprA winged helix domain DC090_RS00210 PF13335 Magnesium chelatase, subunit ChlI C-terminal DC090_RS00210 PF01078 Magnesium chelatase, subunit ChlI DC090_RS00215 PF02021 Uncharacterised protein family UPF0102 DC090_RS00220 PF10611 Protein of unknown function (DUF2469) DC090_RS00225 PF01351 Ribonuclease HII DC090_RS00230 PF10502 Signal peptidase, peptidase S26 DC090_RS00235 PF01245 Ribosomal protein L19 DC090_RS00240 PF01746 tRNA (Guanine-1)-methyltransferase DC090_RS00245 PF01782 RimM N-terminal domain DC090_RS00245 PF05239 PRC-barrel domain DC090_RS00255 PF00886 Ribosomal protein S16 DC090_RS00260 PF01545 Cation efflux family DC090_RS00260 PF16916 Dimerisation domain of Zinc Transporter DC090_RS00270 PF01979 Amidohydrolase family DC090_RS00275 PF02881 SRP54-type protein, helical bundle domain DC090_RS00275 PF02978 Signal peptide binding domain DC090_RS00275 PF00448 SRP54-type protein, GTPase domain DC090_RS00280 PF02881 SRP54-type protein, helical bundle domain DC090_RS00280 PF00448 SRP54-type protein, GTPase domain DC090_RS00285 PF17440 Thiol-activated cytolysin beta sandwich domain DC090_RS00285 PF01289 Thiol-activated cytolysin DC090_RS00295 PF06470 SMC proteins Flexible Hinge Domain DC090_RS00295 PF02463 RecF/RecN/SMC N terminal domain DC090_RS00300 PF00334 Nucleoside diphosphate kinase DC090_RS00305 PF02875 Mur ligase family, glutamate ligase domain DC090_RS00305 PF08245 Mur ligase middle domain DC090_RS00310 PF08264 Anticodon-binding domain of tRNA DC090_RS00310 PF00133 tRNA synthetases class I (I, L, M and V) DC090_RS00325 PF14748 Pyrroline-5-carboxylate reductase dimerisation DC090_RS00325 PF03807 NADP oxidoreductase coenzyme F420-dependent DC090_RS00335 PF08264 Anticodon-binding domain of tRNA DC090_RS00335 PF00133 tRNA synthetases class I (I, L, M and V) DC090_RS00340 PF00501 AMP-binding enzyme DC090_RS00345 PF01817 Chorismate mutase type II DC090_RS00345 PF02153 Prephenate dehydrogenase DC090_RS00350 PF06689 ClpX C4-type zinc finger DC090_RS00350 PF10431 C-terminal, D2-small domain, of ClpB protein DC090_RS00350 PF07724 AAA domain (Cdc48 subfamily) DC090_RS00355 PF00574 Clp protease DC090_RS00360 PF00574 Clp protease DC090_RS00365 PF05697 Bacterial trigger factor protein (TF) DC090_RS00365 PF05698 Bacterial trigger factor protein (TF) C-terminus DC090_RS00365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DC090_RS00370 PF00248 Aldo/keto reductase family DC090_RS00380 PF00933 Glycosyl hydrolase family 3 N terminal domain DC090_RS00390 PF02837 Glycosyl hydrolases family 2, sugar binding domain DC090_RS00390 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DC090_RS00390 PF00703 Glycosyl hydrolases family 2 DC090_RS00395 PF00356 Bacterial regulatory proteins, lacI family DC090_RS00410 PF12848 ABC transporter DC090_RS00410 PF16326 ABC transporter C-terminal domain DC090_RS00410 PF00005 ABC transporter DC090_RS00425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DC090_RS00425 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS00435 PF01783 Ribosomal L32p protein family DC090_RS00440 PF01205 Uncharacterized protein family UPF0029 DC090_RS00440 PF09186 Domain of unknown function (DUF1949) DC090_RS00445 PF00291 Pyridoxal-phosphate dependent enzyme DC090_RS00450 PF00132 Bacterial transferase hexapeptide (six repeats) DC090_RS00460 PF02502 Ribose/Galactose Isomerase DC090_RS00465 PF01431 Peptidase family M13 DC090_RS00465 PF05649 Peptidase family M13 DC090_RS00470 PF05661 Protein of unknown function (DUF808) DC090_RS00475 PF11838 ERAP1-like C-terminal domain DC090_RS00475 PF01433 Peptidase family M1 domain DC090_RS00480 PF03352 Methyladenine glycosylase DC090_RS00480 PF00958 GMP synthase C terminal domain DC090_RS00480 PF00117 Glutamine amidotransferase class-I DC090_RS00480 PF13673 Acetyltransferase (GNAT) domain DC090_RS00480 PF13302 Acetyltransferase (GNAT) domain DC090_RS00490 PF02446 4-alpha-glucanotransferase DC090_RS00500 PF00005 ABC transporter DC090_RS00500 PF12848 ABC transporter DC090_RS00525 PF00929 Exonuclease DC090_RS00545 PF00535 Glycosyl transferase family 2 DC090_RS00555 PF00535 Glycosyl transferase family 2 DC090_RS00570 PF00535 Glycosyl transferase family 2 DC090_RS00585 PF00535 Glycosyl transferase family 2 DC090_RS00585 PF01501 Glycosyl transferase family 8 DC090_RS00590 PF04991 LicD family DC090_RS00595 PF12804 MobA-like NTP transferase domain DC090_RS00600 PF00534 Glycosyl transferases group 1 DC090_RS00600 PF13439 Glycosyltransferase Family 4 DC090_RS00610 PF00271 Helicase conserved C-terminal domain DC090_RS00610 PF08148 DSHCT (NUC185) domain DC090_RS00610 PF00270 DEAD/DEAH box helicase DC090_RS00615 PF01168 Alanine racemase, N-terminal domain DC090_RS00620 PF04055 Radical SAM superfamily DC090_RS00625 PF02901 Pyruvate formate lyase-like DC090_RS00625 PF01228 Glycine radical DC090_RS00630 PF02901 Pyruvate formate lyase-like DC090_RS00630 PF01228 Glycine radical DC090_RS00640 PF01063 Amino-transferase class IV DC090_RS00645 PF00180 Isocitrate/isopropylmalate dehydrogenase DC090_RS00660 PF00206 Lyase DC090_RS00660 PF10415 Fumarase C C-terminus DC090_RS00670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DC090_RS00670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DC090_RS00675 PF10369 Small subunit of acetolactate synthase DC090_RS00680 PF00205 Thiamine pyrophosphate enzyme, central domain DC090_RS00680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DC090_RS00680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DC090_RS00685 PF06826 Predicted Permease Membrane Region DC090_RS00685 PF02080 TrkA-C domain DC090_RS00690 PF00920 Dehydratase family DC090_RS00695 PF08241 Methyltransferase domain DC090_RS00735 PF03949 Malic enzyme, NAD binding domain DC090_RS00735 PF00390 Malic enzyme, N-terminal domain DC090_RS00740 PF02934 GatB/GatE catalytic domain DC090_RS00740 PF02637 GatB domain DC090_RS00745 PF01425 Amidase DC090_RS00750 PF02686 Glu-tRNAGln amidotransferase C subunit DC090_RS00755 PF13396 Phospholipase_D-nuclease N-terminal DC090_RS00755 PF13091 PLD-like domain DC090_RS00760 PF00082 Subtilase family DC090_RS00760 PF04151 Bacterial pre-peptidase C-terminal domain DC090_RS00765 PF02661 Fic/DOC family DC090_RS00765 PF13784 Fic/DOC family N-terminal DC090_RS00770 PF00294 pfkB family carbohydrate kinase DC090_RS00780 PF03747 ADP-ribosylglycohydrolase DC090_RS00785 PF07702 UTRA domain DC090_RS00785 PF00392 Bacterial regulatory proteins, gntR family DC090_RS00790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DC090_RS00790 PF03120 NAD-dependent DNA ligase OB-fold domain DC090_RS00790 PF01653 NAD-dependent DNA ligase adenylation domain DC090_RS00790 PF12826 Helix-hairpin-helix motif DC090_RS00790 PF00533 BRCA1 C Terminus (BRCT) domain DC090_RS00795 PF02586 SOS response associated peptidase (SRAP) DC090_RS00800 PF07730 Histidine kinase DC090_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS00805 PF00072 Response regulator receiver domain DC090_RS00805 PF00196 Bacterial regulatory proteins, luxR family DC090_RS00810 PF00005 ABC transporter DC090_RS00810 PF02687 FtsX-like permease family DC090_RS00810 PF12704 MacB-like periplasmic core domain DC090_RS00820 PF02467 Transcription factor WhiB DC090_RS00825 PF12282 Signal transduction histidine kinase DC090_RS00825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS00825 PF07568 Histidine kinase DC090_RS00835 PF00303 Thymidylate synthase DC090_RS00840 PF00186 Dihydrofolate reductase DC090_RS00860 PF02910 Fumarate reductase flavoprotein C-term DC090_RS00860 PF00890 FAD binding domain DC090_RS00870 PF01699 Sodium/calcium exchanger protein DC090_RS00880 PF00005 ABC transporter DC090_RS00885 PF00155 Aminotransferase class I and II DC090_RS00885 PF00392 Bacterial regulatory proteins, gntR family DC090_RS00905 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DC090_RS00905 PF12905 Endo-alpha-N-acetylgalactosaminidase DC090_RS00905 PF17451 Glycosyl hydrolase 101 beta sandwich domain DC090_RS00905 PF08305 NPCBM/NEW2 domain DC090_RS00905 PF17974 Galactose-binding domain-like DC090_RS00905 PF18080 Galactose mutarotase-like fold domain DC090_RS00910 PF03699 Uncharacterised protein family (UPF0182) DC090_RS00920 PF05362 Lon protease (S16) C-terminal proteolytic domain DC090_RS00920 PF13180 PDZ domain DC090_RS00935 PF13361 UvrD-like helicase C-terminal domain DC090_RS00935 PF00580 UvrD/REP helicase N-terminal domain DC090_RS00935 PF00570 HRDC domain DC090_RS00940 PF00293 NUDIX domain DC090_RS00940 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DC090_RS00940 PF09297 NADH pyrophosphatase zinc ribbon domain DC090_RS00945 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DC090_RS00945 PF00128 Alpha amylase, catalytic domain DC090_RS00950 PF00579 tRNA synthetases class I (W and Y) DC090_RS00955 PF00343 Carbohydrate phosphorylase DC090_RS00960 PF07885 Ion channel DC090_RS00975 PF00005 ABC transporter DC090_RS00985 PF00128 Alpha amylase, catalytic domain DC090_RS00985 PF11896 Domain of unknown function (DUF3416) DC090_RS00990 PF16657 Maltogenic Amylase, C-terminal domain DC090_RS00990 PF00128 Alpha amylase, catalytic domain DC090_RS00995 PF18085 Maltokinase N-terminal cap domain DC090_RS00995 PF01636 Phosphotransferase enzyme family DC090_RS01000 PF00128 Alpha amylase, catalytic domain DC090_RS01000 PF02806 Alpha amylase, C-terminal all-beta domain DC090_RS01000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DC090_RS01015 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01020 PF14785 Maltose transport system permease protein MalF P2 domain DC090_RS01020 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01030 PF00356 Bacterial regulatory proteins, lacI family DC090_RS01035 PF16657 Maltogenic Amylase, C-terminal domain DC090_RS01035 PF00128 Alpha amylase, catalytic domain DC090_RS01075 PF01939 Endonuclease NucS DC090_RS01085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DC090_RS01085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DC090_RS01090 PF02874 ATP synthase alpha/beta family, beta-barrel domain DC090_RS01090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DC090_RS01095 PF00231 ATP synthase DC090_RS01100 PF02874 ATP synthase alpha/beta family, beta-barrel domain DC090_RS01100 PF00306 ATP synthase alpha/beta chain, C terminal domain DC090_RS01100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DC090_RS01105 PF00213 ATP synthase delta (OSCP) subunit DC090_RS01110 PF00430 ATP synthase B/B' CF(0) DC090_RS01115 PF00137 ATP synthase subunit C DC090_RS01120 PF00119 ATP synthase A chain DC090_RS01130 PF00953 Glycosyl transferase family 4 DC090_RS01135 PF01300 Telomere recombination DC090_RS01140 PF17827 PrmC N-terminal domain DC090_RS01145 PF00472 RF-1 domain DC090_RS01145 PF03462 PCRF domain DC090_RS01150 PF01197 Ribosomal protein L31 DC090_RS01155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DC090_RS01155 PF07498 Rho termination factor, N-terminal domain DC090_RS01155 PF07497 Rho termination factor, RNA-binding domain DC090_RS01160 PF00288 GHMP kinases N terminal domain DC090_RS01165 PF00291 Pyridoxal-phosphate dependent enzyme DC090_RS01170 PF01842 ACT domain DC090_RS01170 PF03447 Homoserine dehydrogenase, NAD binding domain DC090_RS01170 PF00742 Homoserine dehydrogenase DC090_RS01175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DC090_RS01175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DC090_RS01180 PF03485 Arginyl tRNA synthetase N terminal domain DC090_RS01180 PF05746 DALR anticodon binding domain DC090_RS01180 PF00750 tRNA synthetases class I (R) DC090_RS01205 PF00005 ABC transporter DC090_RS01220 PF03009 Glycerophosphoryl diester phosphodiesterase family DC090_RS01225 PF01551 Peptidase family M23 DC090_RS01230 PF00571 CBS domain DC090_RS01230 PF01595 Cyclin M transmembrane N-terminal domain DC090_RS01235 PF00571 CBS domain DC090_RS01235 PF01595 Cyclin M transmembrane N-terminal domain DC090_RS01235 PF03471 Transporter associated domain DC090_RS01240 PF16870 2-oxoglutarate dehydrogenase C-terminal DC090_RS01240 PF00676 Dehydrogenase E1 component DC090_RS01240 PF02779 Transketolase, pyrimidine binding domain DC090_RS01240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DC090_RS01240 PF16078 2-oxoglutarate dehydrogenase N-terminus DC090_RS01250 PF01476 LysM domain DC090_RS01250 PF08239 Bacterial SH3 domain DC090_RS01250 PF00877 NlpC/P60 family DC090_RS01265 PF04542 Sigma-70 region 2 DC090_RS01265 PF08281 Sigma-70, region 4 DC090_RS01270 PF01979 Amidohydrolase family DC090_RS01275 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DC090_RS01280 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DC090_RS01285 PF00480 ROK family DC090_RS01290 PF00701 Dihydrodipicolinate synthetase family DC090_RS01295 PF00005 ABC transporter DC090_RS01295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS01300 PF00005 ABC transporter DC090_RS01300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DC090_RS01320 PF07859 alpha/beta hydrolase fold DC090_RS01345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DC090_RS01350 PF03193 RsgA GTPase DC090_RS01355 PF00459 Inositol monophosphatase family DC090_RS01360 PF12320 Type 5 capsule protein repressor C-terminal domain DC090_RS01360 PF00149 Calcineurin-like phosphoesterase DC090_RS01365 PF13476 AAA domain DC090_RS01405 PF07517 SecA DEAD-like domain DC090_RS01405 PF01043 SecA preprotein cross-linking domain DC090_RS01405 PF07516 SecA Wing and Scaffold domain DC090_RS01410 PF00348 Polyprenyl synthetase DC090_RS01415 PF00361 Proton-conducting membrane transporter DC090_RS01420 PF00361 Proton-conducting membrane transporter DC090_RS01425 PF00361 Proton-conducting membrane transporter DC090_RS01425 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DC090_RS01430 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DC090_RS01435 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DC090_RS01440 PF12838 4Fe-4S dicluster domain DC090_RS01445 PF00146 NADH dehydrogenase DC090_RS01450 PF01568 Molydopterin dinucleotide binding domain DC090_RS01450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DC090_RS01450 PF00384 Molybdopterin oxidoreductase DC090_RS01450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DC090_RS01455 PF10531 SLBB domain DC090_RS01455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DC090_RS01455 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DC090_RS01465 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DC090_RS01470 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DC090_RS01475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DC090_RS01480 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DC090_RS01485 PF01494 FAD binding domain DC090_RS01490 PF01209 ubiE/COQ5 methyltransferase family DC090_RS01495 PF00425 chorismate binding enzyme DC090_RS01500 PF13180 PDZ domain DC090_RS01505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DC090_RS01505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DC090_RS01510 PF13378 Enolase C-terminal domain-like DC090_RS01510 PF18374 Enolase N-terminal domain-like DC090_RS01515 PF00378 Enoyl-CoA hydratase/isomerase DC090_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01530 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01540 PF00501 AMP-binding enzyme DC090_RS01540 PF13193 AMP-binding enzyme C-terminal domain DC090_RS01545 PF01040 UbiA prenyltransferase family DC090_RS01555 PF00300 Histidine phosphatase superfamily (branch 1) DC090_RS01560 PF01047 MarR family DC090_RS01570 PF12728 Helix-turn-helix domain DC090_RS01575 PF02386 Cation transport protein DC090_RS01580 PF02080 TrkA-C domain DC090_RS01580 PF02254 TrkA-N domain DC090_RS01585 PF06745 KaiC DC090_RS01585 PF18073 Rubredoxin metal binding domain DC090_RS01595 PF10576 Iron-sulfur binding domain of endonuclease III DC090_RS01595 PF00633 Helix-hairpin-helix motif DC090_RS01595 PF00730 HhH-GPD superfamily base excision DNA repair protein DC090_RS01610 PF04324 BFD-like [2Fe-2S] binding domain DC090_RS01610 PF01266 FAD dependent oxidoreductase DC090_RS01615 PF00890 FAD binding domain DC090_RS01620 PF13183 4Fe-4S dicluster domain DC090_RS01620 PF02754 Cysteine-rich domain DC090_RS01625 PF08450 SMP-30/Gluconolactonase/LRE-like region DC090_RS01635 PF00230 Major intrinsic protein DC090_RS01640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS01640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS01645 PF03176 MMPL family DC090_RS01650 PF01336 OB-fold nucleic acid binding domain DC090_RS01650 PF00152 tRNA synthetases class II (D, K and N) DC090_RS01660 PF02261 Aspartate decarboxylase DC090_RS01665 PF02569 Pantoate-beta-alanine ligase DC090_RS01675 PF02733 Dak1 domain DC090_RS01680 PF02734 DAK2 domain DC090_RS01685 PF05524 PEP-utilising enzyme, N-terminal DC090_RS01685 PF00391 PEP-utilising enzyme, mobile domain DC090_RS01685 PF02896 PEP-utilising enzyme, TIM barrel domain DC090_RS01685 PF00381 PTS HPr component phosphorylation site DC090_RS01685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DC090_RS01695 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DC090_RS01695 PF00703 Glycosyl hydrolases family 2 DC090_RS01695 PF16353 Domain of unknown function(DUF4981) DC090_RS01695 PF02929 Beta galactosidase small chain DC090_RS01695 PF02837 Glycosyl hydrolases family 2, sugar binding domain DC090_RS01700 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01705 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01710 PF13416 Bacterial extracellular solute-binding protein DC090_RS01715 PF00356 Bacterial regulatory proteins, lacI family DC090_RS01735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DC090_RS01740 PF00809 Pterin binding enzyme DC090_RS01745 PF01227 GTP cyclohydrolase I DC090_RS01750 PF00004 ATPase family associated with various cellular activities (AAA) DC090_RS01750 PF17862 AAA+ lid domain DC090_RS01750 PF01434 Peptidase family M41 DC090_RS01755 PF00156 Phosphoribosyl transferase domain DC090_RS01760 PF01171 PP-loop family DC090_RS01760 PF09179 TilS substrate binding domain DC090_RS01770 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DC090_RS01775 PF00719 Inorganic pyrophosphatase DC090_RS01780 PF00877 NlpC/P60 family DC090_RS01785 PF00561 alpha/beta hydrolase fold DC090_RS01790 PF12146 Serine aminopeptidase, S33 DC090_RS01800 PF02913 FAD linked oxidases, C-terminal domain DC090_RS01800 PF01565 FAD binding domain DC090_RS01800 PF13183 4Fe-4S dicluster domain DC090_RS01805 PF02896 PEP-utilising enzyme, TIM barrel domain DC090_RS01805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DC090_RS01805 PF00391 PEP-utilising enzyme, mobile domain DC090_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS01830 PF00128 Alpha amylase, catalytic domain DC090_RS01835 PF01381 Helix-turn-helix DC090_RS01845 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DC090_RS01860 PF01867 CRISPR associated protein Cas1 DC090_RS01890 PF18019 HD domain DC090_RS01890 PF00270 DEAD/DEAH box helicase DC090_RS01890 PF18395 Cas3 C-terminal domain DC090_RS01925 PF00392 Bacterial regulatory proteins, gntR family DC090_RS01940 PF00005 ABC transporter DC090_RS01945 PF02361 Cobalt transport protein DC090_RS01950 PF03747 ADP-ribosylglycohydrolase DC090_RS01970 PF00155 Aminotransferase class I and II DC090_RS01980 PF09370 Phosphoenolpyruvate hydrolase-like DC090_RS01985 PF02308 MgtC family DC090_RS01990 PF00083 Sugar (and other) transporter DC090_RS01995 PF00356 Bacterial regulatory proteins, lacI family DC090_RS02010 PF00149 Calcineurin-like phosphoesterase DC090_RS02010 PF02872 5'-nucleotidase, C-terminal domain DC090_RS02030 PF00005 ABC transporter DC090_RS02035 PF13847 Methyltransferase domain DC090_RS02040 PF00356 Bacterial regulatory proteins, lacI family DC090_RS02045 PF00005 ABC transporter DC090_RS02050 PF02653 Branched-chain amino acid transport system / permease component DC090_RS02055 PF13407 Periplasmic binding protein domain DC090_RS02060 PF00294 pfkB family carbohydrate kinase DC090_RS02065 PF05025 RbsD / FucU transport protein family DC090_RS02070 PF00703 Glycosyl hydrolases family 2 DC090_RS02070 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DC090_RS02070 PF02837 Glycosyl hydrolases family 2, sugar binding domain DC090_RS02070 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DC090_RS02070 PF16355 Domain of unknown function (DUF4982) DC090_RS02075 PF07691 PA14 domain DC090_RS02075 PF02838 Glycosyl hydrolase family 20, domain 2 DC090_RS02075 PF00728 Glycosyl hydrolase family 20, catalytic domain DC090_RS02085 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DC090_RS02085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DC090_RS02095 PF02447 GntP family permease DC090_RS02100 PF00356 Bacterial regulatory proteins, lacI family DC090_RS02110 PF00703 Glycosyl hydrolases family 2 DC090_RS02110 PF02837 Glycosyl hydrolases family 2, sugar binding domain DC090_RS02110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DC090_RS02110 PF16353 Domain of unknown function(DUF4981) DC090_RS02110 PF02929 Beta galactosidase small chain DC090_RS02125 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02140 PF00356 Bacterial regulatory proteins, lacI family DC090_RS02150 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02155 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DC090_RS02160 PF02837 Glycosyl hydrolases family 2, sugar binding domain DC090_RS02160 PF02929 Beta galactosidase small chain DC090_RS02160 PF16353 Domain of unknown function(DUF4981) DC090_RS02160 PF00703 Glycosyl hydrolases family 2 DC090_RS02170 PF03553 Na+/H+ antiporter family DC090_RS02175 PF00155 Aminotransferase class I and II DC090_RS02180 PF02653 Branched-chain amino acid transport system / permease component DC090_RS02185 PF00005 ABC transporter DC090_RS02190 PF13407 Periplasmic binding protein domain DC090_RS02195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS02195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS02200 PF01261 Xylose isomerase-like TIM barrel DC090_RS02225 PF01116 Fructose-bisphosphate aldolase class-II DC090_RS02230 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02235 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02245 PF08220 DeoR-like helix-turn-helix domain DC090_RS02245 PF00455 DeoR C terminal sensor domain DC090_RS02250 PF01047 MarR family DC090_RS02250 PF00480 ROK family DC090_RS02255 PF01055 Glycosyl hydrolases family 31 DC090_RS02255 PF13802 Galactose mutarotase-like DC090_RS02270 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02280 PF00884 Sulfatase DC090_RS02285 PF00356 Bacterial regulatory proteins, lacI family DC090_RS02290 PF00083 Sugar (and other) transporter DC090_RS02295 PF04055 Radical SAM superfamily DC090_RS02295 PF13186 Iron-sulfur cluster-binding domain DC090_RS02300 PF01925 Sulfite exporter TauE/SafE DC090_RS02305 PF02502 Ribose/Galactose Isomerase DC090_RS02310 PF08240 Alcohol dehydrogenase GroES-like domain DC090_RS02310 PF00107 Zinc-binding dehydrogenase DC090_RS02315 PF02734 DAK2 domain DC090_RS02315 PF02733 Dak1 domain DC090_RS02320 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS02320 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS02325 PF00596 Class II Aldolase and Adducin N-terminal domain DC090_RS02330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS02330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS02340 PF05573 NosL DC090_RS02340 PF08220 DeoR-like helix-turn-helix domain DC090_RS02345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS02345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS02360 PF04198 Putative sugar-binding domain DC090_RS02360 PF13936 Helix-turn-helix domain DC090_RS02365 PF07690 Major Facilitator Superfamily DC090_RS02375 PF00294 pfkB family carbohydrate kinase DC090_RS02380 PF00004 ATPase family associated with various cellular activities (AAA) DC090_RS02380 PF07724 AAA domain (Cdc48 subfamily) DC090_RS02380 PF17871 AAA lid domain DC090_RS02380 PF02861 Clp amino terminal domain, pathogenicity island component DC090_RS02380 PF10431 C-terminal, D2-small domain, of ClpB protein DC090_RS02385 PF02580 D-Tyr-tRNA(Tyr) deacylase DC090_RS02395 PF01571 Aminomethyltransferase folate-binding domain DC090_RS02400 PF08768 Domain of unknown function (DUF1794) DC090_RS02410 PF00149 Calcineurin-like phosphoesterase DC090_RS02410 PF02872 5'-nucleotidase, C-terminal domain DC090_RS02420 PF01235 Sodium:alanine symporter family DC090_RS02430 PF01384 Phosphate transporter family DC090_RS02435 PF00005 ABC transporter DC090_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS02450 PF12849 PBP superfamily domain DC090_RS02455 PF00300 Histidine phosphatase superfamily (branch 1) DC090_RS02455 PF00293 NUDIX domain DC090_RS02460 PF13089 Polyphosphate kinase N-terminal domain DC090_RS02460 PF02503 Polyphosphate kinase middle domain DC090_RS02460 PF17941 Polyphosphate kinase C-terminal domain 1 DC090_RS02460 PF13090 Polyphosphate kinase C-terminal domain 2 DC090_RS02470 PF00145 C-5 cytosine-specific DNA methylase DC090_RS02470 PF12728 Helix-turn-helix domain DC090_RS02475 PF09570 SinI restriction endonuclease DC090_RS02520 PF00476 DNA polymerase family A DC090_RS02520 PF01612 3'-5' exonuclease DC090_RS02520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DC090_RS02520 PF01367 5'-3' exonuclease, C-terminal SAM fold DC090_RS02565 PF02772 S-adenosylmethionine synthetase, central domain DC090_RS02565 PF02773 S-adenosylmethionine synthetase, C-terminal domain DC090_RS02565 PF00438 S-adenosylmethionine synthetase, N-terminal domain DC090_RS02570 PF01555 DNA methylase DC090_RS02575 PF00145 C-5 cytosine-specific DNA methylase DC090_RS02600 PF03354 Phage Terminase DC090_RS02610 PF04860 Phage portal protein DC090_RS02645 PF04471 Restriction endonuclease DC090_RS02645 PF14338 Mrr N-terminal domain DC090_RS02650 PF01022 Bacterial regulatory protein, arsR family DC090_RS02680 PF13610 DDE domain DC090_RS02690 PF07690 Major Facilitator Superfamily DC090_RS02695 PF02909 Tetracyclin repressor-like, C-terminal domain DC090_RS02695 PF00440 Bacterial regulatory proteins, tetR family DC090_RS02710 PF13610 DDE domain DC090_RS02745 PF05105 Bacteriophage holin family DC090_RS02765 PF02796 Helix-turn-helix domain of resolvase DC090_RS02765 PF00239 Resolvase, N terminal domain DC090_RS02785 PF00398 Ribosomal RNA adenine dimethylase DC090_RS02805 PF01641 SelR domain DC090_RS02830 PF03023 Lipid II flippase MurJ DC090_RS02835 PF00056 lactate/malate dehydrogenase, NAD binding domain DC090_RS02835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DC090_RS02850 PF13519 von Willebrand factor type A domain DC090_RS02855 PF17802 Prealbumin-like fold domain DC090_RS02855 PF05737 Collagen binding domain DC090_RS02855 PF05738 Cna protein B-type domain DC090_RS02865 PF02028 BCCT, betaine/carnitine/choline family transporter DC090_RS02895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DC090_RS02895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DC090_RS02900 PF01259 SAICAR synthetase DC090_RS02905 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DC090_RS02905 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DC090_RS02910 PF00709 Adenylosuccinate synthetase DC090_RS02920 PF01116 Fructose-bisphosphate aldolase class-II DC090_RS02925 PF01384 Phosphate transporter family DC090_RS02935 PF00293 NUDIX domain DC090_RS02970 PF17871 AAA lid domain DC090_RS02970 PF00004 ATPase family associated with various cellular activities (AAA) DC090_RS02970 PF07724 AAA domain (Cdc48 subfamily) DC090_RS02970 PF02861 Clp amino terminal domain, pathogenicity island component DC090_RS02970 PF10431 C-terminal, D2-small domain, of ClpB protein DC090_RS02980 PF00749 tRNA synthetases class I (E and Q), catalytic domain DC090_RS02990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DC090_RS02990 PF00326 Prolyl oligopeptidase family DC090_RS02990 PF07676 WD40-like Beta Propeller Repeat DC090_RS02995 PF03009 Glycerophosphoryl diester phosphodiesterase family DC090_RS03010 PF00293 NUDIX domain DC090_RS03020 PF01556 DnaJ C terminal domain DC090_RS03020 PF00226 DnaJ domain DC090_RS03020 PF00684 DnaJ central domain DC090_RS03025 PF01025 GrpE DC090_RS03030 PF00012 Hsp70 protein DC090_RS03040 PF00156 Phosphoribosyl transferase domain DC090_RS03045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DC090_RS03050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DC090_RS03050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DC090_RS03055 PF00156 Phosphoribosyl transferase domain DC090_RS03065 PF01568 Molydopterin dinucleotide binding domain DC090_RS03065 PF00384 Molybdopterin oxidoreductase DC090_RS03065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DC090_RS03070 PF12800 4Fe-4S binding domain DC090_RS03070 PF13247 4Fe-4S dicluster domain DC090_RS03080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DC090_RS03080 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS03085 PF02583 Metal-sensitive transcriptional repressor DC090_RS03090 PF00384 Molybdopterin oxidoreductase DC090_RS03090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DC090_RS03090 PF01568 Molydopterin dinucleotide binding domain DC090_RS03095 PF13247 4Fe-4S dicluster domain DC090_RS03095 PF12800 4Fe-4S binding domain DC090_RS03105 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DC090_RS03105 PF00326 Prolyl oligopeptidase family DC090_RS03115 PF03649 Uncharacterised protein family (UPF0014) DC090_RS03120 PF00480 ROK family DC090_RS03145 PF07883 Cupin domain DC090_RS03150 PF07690 Major Facilitator Superfamily DC090_RS03165 PF08402 TOBE domain DC090_RS03165 PF00005 ABC transporter DC090_RS03170 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03200 PF00361 Proton-conducting membrane transporter DC090_RS03205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DC090_RS03210 PF13244 Domain of unknown function (DUF4040) DC090_RS03210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DC090_RS03210 PF00361 Proton-conducting membrane transporter DC090_RS03210 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DC090_RS03215 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DC090_RS03260 PF13683 Integrase core domain DC090_RS03260 PF13276 HTH-like domain DC090_RS03285 PF00561 alpha/beta hydrolase fold DC090_RS03290 PF12169 DNA polymerase III subunits gamma and tau domain III DC090_RS03295 PF02223 Thymidylate kinase DC090_RS03300 PF13368 Topoisomerase C-terminal repeat DC090_RS03300 PF01751 Toprim domain DC090_RS03300 PF01131 DNA topoisomerase DC090_RS03305 PF05175 Methyltransferase small domain DC090_RS03305 PF02390 Putative methyltransferase DC090_RS03305 PF17827 PrmC N-terminal domain DC090_RS03315 PF13443 Cro/C1-type HTH DNA-binding domain DC090_RS03320 PF00270 DEAD/DEAH box helicase DC090_RS03320 PF00271 Helicase conserved C-terminal domain DC090_RS03350 PF00437 Type II/IV secretion system protein DC090_RS03365 PF00561 alpha/beta hydrolase fold DC090_RS03370 PF00730 HhH-GPD superfamily base excision DNA repair protein DC090_RS03370 PF00633 Helix-hairpin-helix motif DC090_RS03370 PF10576 Iron-sulfur binding domain of endonuclease III DC090_RS03375 PF13545 Crp-like helix-turn-helix domain DC090_RS03375 PF00027 Cyclic nucleotide-binding domain DC090_RS03390 PF02467 Transcription factor WhiB DC090_RS03395 PF00912 Transglycosylase DC090_RS03395 PF00905 Penicillin binding protein transpeptidase domain DC090_RS03410 PF02903 Alpha amylase, N-terminal ig-like domain DC090_RS03410 PF00128 Alpha amylase, catalytic domain DC090_RS03420 PF06463 Molybdenum Cofactor Synthesis C DC090_RS03420 PF04055 Radical SAM superfamily DC090_RS03425 PF02391 MoaE protein DC090_RS03430 PF01967 MoaC family DC090_RS03435 PF03453 MoeA N-terminal region (domain I and II) DC090_RS03435 PF00994 Probable molybdopterin binding domain DC090_RS03435 PF03454 MoeA C-terminal region (domain IV) DC090_RS03440 PF00994 Probable molybdopterin binding domain DC090_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03480 PF00581 Rhodanese-like domain DC090_RS03480 PF00899 ThiF family DC090_RS03495 PF08903 Domain of unknown function (DUF1846) DC090_RS03500 PF05525 Branched-chain amino acid transport protein DC090_RS03510 PF14437 MafB19-like deaminase DC090_RS03540 PF00800 Prephenate dehydratase DC090_RS03550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DC090_RS03550 PF02403 Seryl-tRNA synthetase N-terminal domain DC090_RS03580 PF02056 Family 4 glycosyl hydrolase DC090_RS03580 PF11975 Family 4 glycosyl hydrolase C-terminal domain DC090_RS03585 PF00294 pfkB family carbohydrate kinase DC090_RS03590 PF13407 Periplasmic binding protein domain DC090_RS03595 PF02653 Branched-chain amino acid transport system / permease component DC090_RS03600 PF00005 ABC transporter DC090_RS03625 PF00288 GHMP kinases N terminal domain DC090_RS03625 PF08544 GHMP kinases C terminal DC090_RS03625 PF10509 Galactokinase galactose-binding signature DC090_RS03630 PF02384 N-6 DNA Methylase DC090_RS03630 PF12161 HsdM N-terminal domain DC090_RS03640 PF12161 HsdM N-terminal domain DC090_RS03640 PF02384 N-6 DNA Methylase DC090_RS03700 PF02384 N-6 DNA Methylase DC090_RS03700 PF12161 HsdM N-terminal domain DC090_RS03705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DC090_RS03710 PF01850 PIN domain DC090_RS03715 PF01420 Type I restriction modification DNA specificity domain DC090_RS03735 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DC090_RS03735 PF18766 SWI2/SNF2 ATPase DC090_RS03735 PF12008 Type I restriction and modification enzyme - subunit R C terminal DC090_RS03755 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03760 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03775 PF00356 Bacterial regulatory proteins, lacI family DC090_RS03780 PF00664 ABC transporter transmembrane region DC090_RS03780 PF00005 ABC transporter DC090_RS03785 PF00664 ABC transporter transmembrane region DC090_RS03785 PF00005 ABC transporter DC090_RS03800 PF01032 FecCD transport family DC090_RS03810 PF00005 ABC transporter DC090_RS03820 PF13649 Methyltransferase domain DC090_RS03825 PF00294 pfkB family carbohydrate kinase DC090_RS03830 PF01081 KDPG and KHG aldolase DC090_RS03835 PF03786 D-mannonate dehydratase (UxuA) DC090_RS03840 PF01232 Mannitol dehydrogenase Rossmann domain DC090_RS03840 PF08125 Mannitol dehydrogenase C-terminal domain DC090_RS03845 PF01614 Bacterial transcriptional regulator DC090_RS03845 PF09339 IclR helix-turn-helix domain DC090_RS03850 PF00005 ABC transporter DC090_RS03860 PF01757 Acyltransferase family DC090_RS03870 PF13597 Anaerobic ribonucleoside-triphosphate reductase DC090_RS03870 PF03477 ATP cone domain DC090_RS03875 PF01263 Aldose 1-epimerase DC090_RS03880 PF00072 Response regulator receiver domain DC090_RS03880 PF00196 Bacterial regulatory proteins, luxR family DC090_RS03890 PF00005 ABC transporter DC090_RS03900 PF00005 ABC transporter DC090_RS03910 PF07730 Histidine kinase DC090_RS03915 PF00196 Bacterial regulatory proteins, luxR family DC090_RS03915 PF00072 Response regulator receiver domain DC090_RS03920 PF11898 Domain of unknown function (DUF3418) DC090_RS03920 PF00270 DEAD/DEAH box helicase DC090_RS03920 PF00271 Helicase conserved C-terminal domain DC090_RS03920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DC090_RS03920 PF04408 Helicase associated domain (HA2) DC090_RS03950 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03955 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS03970 PF01451 Low molecular weight phosphotyrosine protein phosphatase DC090_RS03975 PF00268 Ribonucleotide reductase, small chain DC090_RS03985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DC090_RS03985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DC090_RS03990 PF02867 Ribonucleotide reductase, barrel domain DC090_RS03990 PF08343 Ribonucleotide reductase N-terminal DC090_RS03990 PF00317 Ribonucleotide reductase, all-alpha domain DC090_RS03995 PF07972 NrdI Flavodoxin like DC090_RS04005 PF01475 Ferric uptake regulator family DC090_RS04010 PF02664 S-Ribosylhomocysteinase (LuxS) DC090_RS04015 PF01048 Phosphorylase superfamily DC090_RS04020 PF01661 Macro domain DC090_RS04025 PF00075 RNase H DC090_RS04035 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DC090_RS04035 PF00326 Prolyl oligopeptidase family DC090_RS04045 PF00498 FHA domain DC090_RS04045 PF01061 ABC-2 type transporter DC090_RS04045 PF00005 ABC transporter DC090_RS04050 PF16697 Inner membrane component of T3SS, cytoplasmic domain DC090_RS04060 PF01098 Cell cycle protein DC090_RS04065 PF00905 Penicillin binding protein transpeptidase domain DC090_RS04070 PF00069 Protein kinase domain DC090_RS04070 PF03793 PASTA domain DC090_RS04075 PF04203 Sortase domain DC090_RS04080 PF06781 Cell division protein CrgA DC090_RS04085 PF01694 Rhomboid family DC090_RS04090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DC090_RS04120 PF12089 Transmembrane domain of unknown function (DUF3566) DC090_RS04125 PF00521 DNA gyrase/topoisomerase IV, subunit A DC090_RS04125 PF03989 DNA gyrase C-terminal domain, beta-propeller DC090_RS04130 PF01751 Toprim domain DC090_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS04130 PF00204 DNA gyrase B DC090_RS04130 PF00986 DNA gyrase B subunit, carboxyl terminus DC090_RS04140 PF02463 RecF/RecN/SMC N terminal domain DC090_RS04145 PF00712 DNA polymerase III beta subunit, N-terminal domain DC090_RS04145 PF02767 DNA polymerase III beta subunit, central domain DC090_RS04145 PF02768 DNA polymerase III beta subunit, C-terminal domain DC090_RS04150 PF08299 Bacterial dnaA protein helix-turn-helix DC090_RS04150 PF00308 Bacterial dnaA protein DC090_RS04155 PF00468 Ribosomal protein L34 DC090_RS04160 PF00825 Ribonuclease P DC090_RS04165 PF01809 Putative membrane protein insertion efficiency factor DC090_RS04170 PF02096 60Kd inner membrane protein DC090_RS04180 PF02527 rRNA small subunit methyltransferase G DC090_RS04185 PF13614 AAA domain DC090_RS04190 PF17762 HTH domain found in ParB protein DC090_RS04190 PF02195 ParB-like nuclease domain DC090_RS04195 PF07478 D-ala D-ala ligase C-terminus DC090_RS04195 PF01820 D-ala D-ala ligase N-terminus DC090_RS04200 PF00155 Aminotransferase class I and II DC090_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS04220 PF00293 NUDIX domain DC090_RS04225 PF13735 tRNA nucleotidyltransferase domain 2 putative DC090_RS04225 PF01743 Poly A polymerase head domain DC090_RS04225 PF12627 Probable RNA and SrmB- binding site of polymerase A DC090_RS04230 PF07690 Major Facilitator Superfamily DC090_RS04235 PF01594 AI-2E family transporter DC090_RS04240 PF00905 Penicillin binding protein transpeptidase domain DC090_RS04240 PF00912 Transglycosylase DC090_RS04245 PF01250 Ribosomal protein S6 DC090_RS04250 PF00436 Single-strand binding protein family DC090_RS04255 PF01084 Ribosomal protein S18 DC090_RS04260 PF03948 Ribosomal protein L9, C-terminal domain DC090_RS04260 PF01281 Ribosomal protein L9, N-terminal domain DC090_RS04265 PF02872 5'-nucleotidase, C-terminal domain DC090_RS04265 PF00149 Calcineurin-like phosphoesterase DC090_RS04280 PF03796 DnaB-like helicase C terminal domain DC090_RS04280 PF00772 DnaB-like helicase N terminal domain DC090_RS04285 PF07690 Major Facilitator Superfamily DC090_RS04295 PF00899 ThiF family DC090_RS04310 PF08543 Phosphomethylpyrimidine kinase DC090_RS04315 PF00248 Aldo/keto reductase family DC090_RS04320 PF00561 alpha/beta hydrolase fold DC090_RS04335 PF00585 C-terminal regulatory domain of Threonine dehydratase DC090_RS04335 PF00291 Pyridoxal-phosphate dependent enzyme DC090_RS04355 PF01712 Deoxynucleoside kinase DC090_RS04365 PF01702 Queuine tRNA-ribosyltransferase DC090_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS04370 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS04370 PF00672 HAMP domain DC090_RS04375 PF00072 Response regulator receiver domain DC090_RS04375 PF00486 Transcriptional regulatory protein, C terminal DC090_RS04390 PF00005 ABC transporter DC090_RS04395 PF12704 MacB-like periplasmic core domain DC090_RS04395 PF02687 FtsX-like permease family DC090_RS04425 PF02386 Cation transport protein DC090_RS04440 PF08482 ATP-dependent helicase C-terminal DC090_RS04440 PF04408 Helicase associated domain (HA2) DC090_RS04440 PF00271 Helicase conserved C-terminal domain DC090_RS04440 PF00270 DEAD/DEAH box helicase DC090_RS04455 PF05958 tRNA (Uracil-5-)-methyltransferase DC090_RS04485 PF01661 Macro domain DC090_RS04490 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS04520 PF01791 DeoC/LacD family aldolase DC090_RS04530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DC090_RS04530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DC090_RS04535 PF04198 Putative sugar-binding domain DC090_RS04540 PF13407 Periplasmic binding protein domain DC090_RS04545 PF02653 Branched-chain amino acid transport system / permease component DC090_RS04550 PF02653 Branched-chain amino acid transport system / permease component DC090_RS04555 PF00005 ABC transporter DC090_RS04560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DC090_RS04560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DC090_RS04565 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain DC090_RS04565 PF01113 Dihydrodipicolinate reductase, N-terminus DC090_RS04585 PF00939 Sodium:sulfate symporter transmembrane region DC090_RS04600 PF02361 Cobalt transport protein DC090_RS04605 PF00005 ABC transporter DC090_RS04610 PF04954 Siderophore-interacting protein DC090_RS04610 PF08021 Siderophore-interacting FAD-binding domain DC090_RS04610 PF00005 ABC transporter DC090_RS04610 PF00664 ABC transporter transmembrane region DC090_RS04615 PF00005 ABC transporter DC090_RS04635 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DC090_RS04635 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DC090_RS04640 PF01636 Phosphotransferase enzyme family DC090_RS04645 PF17385 Lacto-N-biose phosphorylase central domain DC090_RS04645 PF17386 Lacto-N-biose phosphorylase C-terminal domain DC090_RS04645 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain DC090_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS04655 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS04665 PF00480 ROK family DC090_RS04670 PF00480 ROK family DC090_RS04675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS04675 PF00005 ABC transporter DC090_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS04680 PF12911 N-terminal TM domain of oligopeptide transport permease C DC090_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS04695 PF00480 ROK family DC090_RS04710 PF03932 CutC family DC090_RS04725 PF02614 Glucuronate isomerase DC090_RS04730 PF03480 Bacterial extracellular solute-binding protein, family 7 DC090_RS04735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DC090_RS04735 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DC090_RS04740 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DC090_RS04745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DC090_RS04745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DC090_RS04750 PF01497 Periplasmic binding protein DC090_RS04755 PF01032 FecCD transport family DC090_RS04760 PF01032 FecCD transport family DC090_RS04765 PF00005 ABC transporter DC090_RS04770 PF00171 Aldehyde dehydrogenase family DC090_RS04775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DC090_RS04775 PF00205 Thiamine pyrophosphate enzyme, central domain DC090_RS04775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DC090_RS04780 PF04962 KduI/IolB family DC090_RS04790 PF00294 pfkB family carbohydrate kinase DC090_RS04800 PF00923 Transaldolase/Fructose-6-phosphate aldolase DC090_RS04805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DC090_RS04805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DC090_RS04810 PF01261 Xylose isomerase-like TIM barrel DC090_RS04815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DC090_RS04815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DC090_RS04820 PF00005 ABC transporter DC090_RS04825 PF02653 Branched-chain amino acid transport system / permease component DC090_RS04830 PF13407 Periplasmic binding protein domain DC090_RS04835 PF00459 Inositol monophosphatase family DC090_RS04840 PF07690 Major Facilitator Superfamily DC090_RS04845 PF00356 Bacterial regulatory proteins, lacI family DC090_RS04850 PF00107 Zinc-binding dehydrogenase DC090_RS04850 PF08240 Alcohol dehydrogenase GroES-like domain DC090_RS04870 PF00005 ABC transporter DC090_RS04875 PF00005 ABC transporter DC090_RS04875 PF00664 ABC transporter transmembrane region DC090_RS04880 PF00664 ABC transporter transmembrane region DC090_RS04880 PF00005 ABC transporter DC090_RS04885 PF17932 Tetracyclin repressor-like, C-terminal domain DC090_RS04885 PF00440 Bacterial regulatory proteins, tetR family DC090_RS04890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DC090_RS04890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DC090_RS04890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DC090_RS04890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DC090_RS04895 PF13088 BNR repeat-like domain DC090_RS04895 PF00754 F5/8 type C domain DC090_RS04895 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DC090_RS04905 PF00403 Heavy-metal-associated domain DC090_RS04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS04910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DC090_RS04910 PF00403 Heavy-metal-associated domain DC090_RS04920 PF09335 SNARE associated Golgi protein DC090_RS04925 PF08328 Adenylosuccinate lyase C-terminal DC090_RS04925 PF00206 Lyase DC090_RS04930 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DC090_RS04935 PF00155 Aminotransferase class I and II DC090_RS04940 PF14256 YwiC-like protein DC090_RS04950 PF01487 Type I 3-dehydroquinase DC090_RS04960 PF00248 Aldo/keto reductase family DC090_RS04965 PF00762 Ferrochelatase DC090_RS04970 PF01066 CDP-alcohol phosphatidyltransferase DC090_RS04980 PF00884 Sulfatase DC090_RS04985 PF00884 Sulfatase DC090_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS05030 PF01032 FecCD transport family DC090_RS05035 PF00005 ABC transporter DC090_RS05065 PF00746 LPXTG cell wall anchor motif DC090_RS05065 PF16555 Gram-positive pilin subunit D1, N-terminal domain DC090_RS05080 PF00300 Histidine phosphatase superfamily (branch 1) DC090_RS05090 PF01895 PhoU domain DC090_RS05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS05095 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS05100 PF00072 Response regulator receiver domain DC090_RS05100 PF00486 Transcriptional regulatory protein, C terminal DC090_RS05105 PF02559 CarD-like/TRCF domain DC090_RS05110 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DC090_RS05115 PF02542 YgbB family DC090_RS05135 PF03611 PTS system sugar-specific permease component DC090_RS05140 PF00596 Class II Aldolase and Adducin N-terminal domain DC090_RS05150 PF02733 Dak1 domain DC090_RS05160 PF04198 Putative sugar-binding domain DC090_RS05175 PF00005 ABC transporter DC090_RS05185 PF01406 tRNA synthetases class I (C) catalytic domain DC090_RS05185 PF09190 DALR domain DC090_RS05190 PF00588 SpoU rRNA Methylase family DC090_RS05190 PF08032 RNA 2'-O ribose methyltransferase substrate binding DC090_RS05205 PF00860 Permease family DC090_RS05230 PF13722 5TM C-terminal transporter carbon starvation CstA DC090_RS05230 PF02554 Carbon starvation protein CstA DC090_RS05240 PF12169 DNA polymerase III subunits gamma and tau domain III DC090_RS05245 PF13662 Toprim domain DC090_RS05245 PF02132 RecR protein DC090_RS05250 PF00696 Amino acid kinase family DC090_RS05250 PF13840 ACT domain DC090_RS05250 PF01842 ACT domain DC090_RS05255 PF02774 Semialdehyde dehydrogenase, dimerisation domain DC090_RS05255 PF01118 Semialdehyde dehydrogenase, NAD binding domain DC090_RS05270 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS05280 PF13416 Bacterial extracellular solute-binding protein DC090_RS05290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DC090_RS05290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DC090_RS05300 PF17912 MalK OB fold domain DC090_RS05300 PF00005 ABC transporter DC090_RS05305 PF00400 WD domain, G-beta repeat DC090_RS05305 PF00069 Protein kinase domain DC090_RS05325 PF00005 ABC transporter DC090_RS05350 PF03167 Uracil DNA glycosylase superfamily DC090_RS05365 PF00118 TCP-1/cpn60 chaperonin family DC090_RS05380 PF00106 short chain dehydrogenase DC090_RS05385 PF01553 Acyltransferase DC090_RS05385 PF00501 AMP-binding enzyme DC090_RS05390 PF00672 HAMP domain DC090_RS05390 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS05390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS05395 PF00486 Transcriptional regulatory protein, C terminal DC090_RS05395 PF00072 Response regulator receiver domain DC090_RS05405 PF04012 PspA/IM30 family DC090_RS05415 PF00313 'Cold-shock' DNA-binding domain DC090_RS05420 PF11228 Protein of unknown function (DUF3027) DC090_RS05425 PF01238 Phosphomannose isomerase type I DC090_RS05430 PF00860 Permease family DC090_RS05435 PF00266 Aminotransferase class-V DC090_RS05445 PF18357 Diphteria toxin repressor SH3 domain DC090_RS05445 PF02742 Iron dependent repressor, metal binding and dimerisation domain DC090_RS05445 PF01325 Iron dependent repressor, N-terminal DNA binding domain DC090_RS05450 PF00877 NlpC/P60 family DC090_RS05450 PF01476 LysM domain DC090_RS05455 PF00582 Universal stress protein family DC090_RS05490 PF03453 MoeA N-terminal region (domain I and II) DC090_RS05490 PF03454 MoeA C-terminal region (domain IV) DC090_RS05490 PF00994 Probable molybdopterin binding domain DC090_RS05515 PF01381 Helix-turn-helix DC090_RS05520 PF05973 Phage derived protein Gp49-like (DUF891) DC090_RS05535 PF12697 Alpha/beta hydrolase family DC090_RS05550 PF01497 Periplasmic binding protein DC090_RS05555 PF01032 FecCD transport family DC090_RS05560 PF01032 FecCD transport family DC090_RS05565 PF00005 ABC transporter DC090_RS05570 PF07702 UTRA domain DC090_RS05570 PF00392 Bacterial regulatory proteins, gntR family DC090_RS05575 PF07859 alpha/beta hydrolase fold DC090_RS05580 PF00083 Sugar (and other) transporter DC090_RS05595 PF00830 Ribosomal L28 family DC090_RS05600 PF00471 Ribosomal protein L33 DC090_RS05605 PF00253 Ribosomal protein S14p/S29e DC090_RS05610 PF01197 Ribosomal protein L31 DC090_RS05615 PF00444 Ribosomal protein L36 DC090_RS05625 PF07690 Major Facilitator Superfamily DC090_RS05635 PF05167 Uncharacterised ACR (DUF711) DC090_RS05640 PF00005 ABC transporter DC090_RS05640 PF00027 Cyclic nucleotide-binding domain DC090_RS05655 PF02378 Phosphotransferase system, EIIC DC090_RS05655 PF00367 phosphotransferase system, EIIB DC090_RS05655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DC090_RS05660 PF03123 CAT RNA binding domain DC090_RS05660 PF00874 PRD domain DC090_RS05670 PF02896 PEP-utilising enzyme, TIM barrel domain DC090_RS05670 PF05524 PEP-utilising enzyme, N-terminal DC090_RS05670 PF00391 PEP-utilising enzyme, mobile domain DC090_RS05680 PF00293 NUDIX domain DC090_RS05700 PF02378 Phosphotransferase system, EIIC DC090_RS05700 PF00367 phosphotransferase system, EIIB DC090_RS05705 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DC090_RS05710 PF00381 PTS HPr component phosphorylation site DC090_RS05730 PF02589 LUD domain DC090_RS05735 PF02589 LUD domain DC090_RS05735 PF11870 Domain of unknown function (DUF3390) DC090_RS05735 PF13183 4Fe-4S dicluster domain DC090_RS05740 PF02754 Cysteine-rich domain DC090_RS05745 PF02652 L-lactate permease DC090_RS05750 PF16995 Transmembrane region of lysyl-tRNA synthetase DC090_RS05750 PF01336 OB-fold nucleic acid binding domain DC090_RS05750 PF00152 tRNA synthetases class II (D, K and N) DC090_RS05750 PF09924 Uncharacterised conserved protein (DUF2156) DC090_RS05765 PF01594 AI-2E family transporter DC090_RS05770 PF02028 BCCT, betaine/carnitine/choline family transporter DC090_RS05775 PF05175 Methyltransferase small domain DC090_RS05790 PF13732 Domain of unknown function (DUF4162) DC090_RS05790 PF00005 ABC transporter DC090_RS05810 PF01053 Cys/Met metabolism PLP-dependent enzyme DC090_RS05815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DC090_RS05815 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase DC090_RS05825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DC090_RS05830 PF00857 Isochorismatase family DC090_RS05855 PF12671 Putative amidase domain DC090_RS05865 PF09334 tRNA synthetases class I (M) DC090_RS05870 PF01026 TatD related DNase DC090_RS05880 PF00398 Ribosomal RNA adenine dimethylase DC090_RS05885 PF08544 GHMP kinases C terminal DC090_RS05885 PF00288 GHMP kinases N terminal domain DC090_RS05890 PF00005 ABC transporter DC090_RS05890 PF12848 ABC transporter DC090_RS05890 PF16326 ABC transporter C-terminal domain DC090_RS05905 PF13732 Domain of unknown function (DUF4162) DC090_RS05905 PF00005 ABC transporter DC090_RS05920 PF00440 Bacterial regulatory proteins, tetR family DC090_RS05930 PF12804 MobA-like NTP transferase domain DC090_RS05930 PF00132 Bacterial transferase hexapeptide (six repeats) DC090_RS05935 PF14572 Phosphoribosyl synthetase-associated domain DC090_RS05935 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DC090_RS05940 PF01386 Ribosomal L25p family DC090_RS05940 PF14693 Ribosomal protein TL5, C-terminal domain DC090_RS05945 PF01195 Peptidyl-tRNA hydrolase DC090_RS05950 PF00271 Helicase conserved C-terminal domain DC090_RS05950 PF00270 DEAD/DEAH box helicase DC090_RS05950 PF17757 UvrB interaction domain DC090_RS05950 PF02559 CarD-like/TRCF domain DC090_RS05950 PF03461 TRCF domain DC090_RS05955 PF01156 Inosine-uridine preferring nucleoside hydrolase DC090_RS05960 PF00113 Enolase, C-terminal TIM barrel domain DC090_RS05960 PF03952 Enolase, N-terminal domain DC090_RS05975 PF02541 Ppx/GppA phosphatase family DC090_RS05995 PF00005 ABC transporter DC090_RS06005 PF00392 Bacterial regulatory proteins, gntR family DC090_RS06010 PF00005 ABC transporter DC090_RS06025 PF00171 Aldehyde dehydrogenase family DC090_RS06030 PF00474 Sodium:solute symporter family DC090_RS06045 PF01625 Peptide methionine sulfoxide reductase DC090_RS06050 PF01272 Transcription elongation factor, GreA/GreB, C-term DC090_RS06050 PF03449 Transcription elongation factor, N-terminal DC090_RS06055 PF02585 GlcNAc-PI de-N-acetylase DC090_RS06060 PF03006 Haemolysin-III related DC090_RS06065 PF01255 Putative undecaprenyl diphosphate synthase DC090_RS06070 PF00294 pfkB family carbohydrate kinase DC090_RS06075 PF02609 Exonuclease VII small subunit DC090_RS06080 PF13742 OB-fold nucleic acid binding domain DC090_RS06080 PF02601 Exonuclease VII, large subunit DC090_RS06085 PF02401 LytB protein DC090_RS06100 PF00005 ABC transporter DC090_RS06115 PF03193 RsgA GTPase DC090_RS06120 PF02646 RmuC family DC090_RS06125 PF06071 Protein of unknown function (DUF933) DC090_RS06125 PF01926 50S ribosome-binding GTPase DC090_RS06155 PF07690 Major Facilitator Superfamily DC090_RS06155 PF00083 Sugar (and other) transporter DC090_RS06160 PF07687 Peptidase dimerisation domain DC090_RS06160 PF01546 Peptidase family M20/M25/M40 DC090_RS06165 PF07690 Major Facilitator Superfamily DC090_RS06170 PF00128 Alpha amylase, catalytic domain DC090_RS06175 PF13416 Bacterial extracellular solute-binding protein DC090_RS06180 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06185 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06190 PF02903 Alpha amylase, N-terminal ig-like domain DC090_RS06190 PF00128 Alpha amylase, catalytic domain DC090_RS06190 PF16657 Maltogenic Amylase, C-terminal domain DC090_RS06195 PF00356 Bacterial regulatory proteins, lacI family DC090_RS06205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DC090_RS06205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DC090_RS06210 PF00696 Amino acid kinase family DC090_RS06225 PF08946 Osmosensory transporter coiled coil DC090_RS06225 PF00083 Sugar (and other) transporter DC090_RS06230 PF00440 Bacterial regulatory proteins, tetR family DC090_RS06235 PF03358 NADPH-dependent FMN reductase DC090_RS06240 PF00268 Ribonucleotide reductase, small chain DC090_RS06245 PF07972 NrdI Flavodoxin like DC090_RS06270 PF01741 Large-conductance mechanosensitive channel, MscL DC090_RS06275 PF01327 Polypeptide deformylase DC090_RS06285 PF01226 Formate/nitrite transporter DC090_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DC090_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06300 PF12911 N-terminal TM domain of oligopeptide transport permease C DC090_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06305 PF00005 ABC transporter DC090_RS06305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS06310 PF00005 ABC transporter DC090_RS06310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS06340 PF00005 ABC transporter DC090_RS06340 PF08402 TOBE domain DC090_RS06345 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06365 PF00356 Bacterial regulatory proteins, lacI family DC090_RS06370 PF00480 ROK family DC090_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06380 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06390 PF01055 Glycosyl hydrolases family 31 DC090_RS06390 PF13802 Galactose mutarotase-like DC090_RS06395 PF00128 Alpha amylase, catalytic domain DC090_RS06400 PF01206 Sulfurtransferase TusA DC090_RS06405 PF04143 Sulphur transport DC090_RS06410 PF03971 Monomeric isocitrate dehydrogenase DC090_RS06425 PF02127 Aminopeptidase I zinc metalloprotease (M18) DC090_RS06430 PF13193 AMP-binding enzyme C-terminal domain DC090_RS06430 PF00501 AMP-binding enzyme DC090_RS06435 PF04055 Radical SAM superfamily DC090_RS06440 PF03099 Biotin/lipoate A/B protein ligase family DC090_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06450 PF12911 N-terminal TM domain of oligopeptide transport permease C DC090_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS06455 PF00005 ABC transporter DC090_RS06455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DC090_RS06460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DC090_RS06465 PF00005 ABC transporter DC090_RS06465 PF00664 ABC transporter transmembrane region DC090_RS06470 PF00005 ABC transporter DC090_RS06470 PF00664 ABC transporter transmembrane region DC090_RS06480 PF00009 Elongation factor Tu GTP binding domain DC090_RS06480 PF03144 Elongation factor Tu domain 2 DC090_RS06480 PF14492 Elongation Factor G, domain II DC090_RS06480 PF00679 Elongation factor G C-terminus DC090_RS06495 PF00037 4Fe-4S binding domain DC090_RS06500 PF00155 Aminotransferase class I and II DC090_RS06505 PF00285 Citrate synthase, C-terminal domain DC090_RS06515 PF02545 Maf-like protein DC090_RS06525 PF00211 Adenylate and Guanylate cyclase catalytic domain DC090_RS06525 PF16701 Adenylate cyclase regulatory domain DC090_RS06530 PF00486 Transcriptional regulatory protein, C terminal DC090_RS06530 PF00072 Response regulator receiver domain DC090_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS06535 PF00672 HAMP domain DC090_RS06535 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS06545 PF03816 Cell envelope-related transcriptional attenuator domain DC090_RS06550 PF03816 Cell envelope-related transcriptional attenuator domain DC090_RS06555 PF00535 Glycosyl transferase family 2 DC090_RS06555 PF00534 Glycosyl transferases group 1 DC090_RS06565 PF16363 GDP-mannose 4,6 dehydratase DC090_RS06580 PF00132 Bacterial transferase hexapeptide (six repeats) DC090_RS06585 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DC090_RS06590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DC090_RS06590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DC090_RS06625 PF02350 UDP-N-acetylglucosamine 2-epimerase DC090_RS06640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DC090_RS06640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DC090_RS06640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DC090_RS06650 PF00005 ABC transporter DC090_RS06650 PF14524 Wzt C-terminal domain DC090_RS06660 PF00534 Glycosyl transferases group 1 DC090_RS06660 PF00535 Glycosyl transferase family 2 DC090_RS06680 PF04321 RmlD substrate binding domain DC090_RS06685 PF00483 Nucleotidyl transferase DC090_RS06690 PF01758 Sodium Bile acid symporter family DC090_RS06700 PF00459 Inositol monophosphatase family DC090_RS06705 PF02467 Transcription factor WhiB DC090_RS06710 PF00535 Glycosyl transferase family 2 DC090_RS06710 PF00534 Glycosyl transferases group 1 DC090_RS06745 PF17863 AAA lid domain DC090_RS06745 PF07726 ATPase family associated with various cellular activities (AAA) DC090_RS06765 PF00486 Transcriptional regulatory protein, C terminal DC090_RS06765 PF00072 Response regulator receiver domain DC090_RS06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS06770 PF00512 His Kinase A (phospho-acceptor) domain DC090_RS06770 PF00672 HAMP domain DC090_RS06775 PF10647 Lipoprotein LpqB beta-propeller domain DC090_RS06775 PF10646 Sporulation and spore germination DC090_RS06780 PF00156 Phosphoribosyl transferase domain DC090_RS06785 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DC090_RS06785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DC090_RS06790 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS06795 PF04461 Protein of unknown function (DUF520) DC090_RS06815 PF00471 Ribosomal protein L33 DC090_RS06830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DC090_RS06830 PF01565 FAD binding domain DC090_RS06845 PF00962 Adenosine/AMP deaminase DC090_RS06855 PF00155 Aminotransferase class I and II DC090_RS06865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DC090_RS06870 PF02357 Transcription termination factor nusG DC090_RS06875 PF00298 Ribosomal protein L11, RNA binding domain DC090_RS06875 PF03946 Ribosomal protein L11, N-terminal domain DC090_RS06880 PF00687 Ribosomal protein L1p/L10e family DC090_RS06885 PF00485 Phosphoribulokinase / Uridine kinase family DC090_RS06890 PF00466 Ribosomal protein L10 DC090_RS06895 PF16320 Ribosomal protein L7/L12 dimerisation domain DC090_RS06895 PF00542 Ribosomal protein L7/L12 C-terminal domain DC090_RS06900 PF04563 RNA polymerase beta subunit DC090_RS06900 PF04560 RNA polymerase Rpb2, domain 7 DC090_RS06900 PF00562 RNA polymerase Rpb2, domain 6 DC090_RS06900 PF10385 RNA polymerase beta subunit external 1 domain DC090_RS06900 PF04565 RNA polymerase Rpb2, domain 3 DC090_RS06900 PF04561 RNA polymerase Rpb2, domain 2 DC090_RS06905 PF05000 RNA polymerase Rpb1, domain 4 DC090_RS06905 PF04997 RNA polymerase Rpb1, domain 1 DC090_RS06905 PF00623 RNA polymerase Rpb1, domain 2 DC090_RS06905 PF04983 RNA polymerase Rpb1, domain 3 DC090_RS06905 PF04998 RNA polymerase Rpb1, domain 5 DC090_RS06910 PF00324 Amino acid permease DC090_RS06915 PF00164 Ribosomal protein S12/S23 DC090_RS06920 PF00177 Ribosomal protein S7p/S5e DC090_RS06925 PF03764 Elongation factor G, domain IV DC090_RS06925 PF14492 Elongation Factor G, domain II DC090_RS06925 PF00679 Elongation factor G C-terminus DC090_RS06925 PF03144 Elongation factor Tu domain 2 DC090_RS06925 PF00009 Elongation factor Tu GTP binding domain DC090_RS06930 PF03143 Elongation factor Tu C-terminal domain DC090_RS06930 PF03144 Elongation factor Tu domain 2 DC090_RS06930 PF00009 Elongation factor Tu GTP binding domain DC090_RS06935 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DC090_RS06935 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DC090_RS06940 PF13419 Haloacid dehalogenase-like hydrolase DC090_RS06945 PF00338 Ribosomal protein S10p/S20e DC090_RS06950 PF00297 Ribosomal protein L3 DC090_RS06955 PF00573 Ribosomal protein L4/L1 family DC090_RS06960 PF00276 Ribosomal protein L23 DC090_RS06965 PF00181 Ribosomal Proteins L2, RNA binding domain DC090_RS06965 PF03947 Ribosomal Proteins L2, C-terminal domain DC090_RS06970 PF00203 Ribosomal protein S19 DC090_RS06975 PF00237 Ribosomal protein L22p/L17e DC090_RS06980 PF00189 Ribosomal protein S3, C-terminal domain DC090_RS06980 PF07650 KH domain DC090_RS06985 PF00252 Ribosomal protein L16p/L10e DC090_RS06990 PF00831 Ribosomal L29 protein DC090_RS06995 PF00366 Ribosomal protein S17 DC090_RS07000 PF00238 Ribosomal protein L14p/L23e DC090_RS07005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DC090_RS07010 PF00673 ribosomal L5P family C-terminus DC090_RS07010 PF00281 Ribosomal protein L5 DC090_RS07015 PF00253 Ribosomal protein S14p/S29e DC090_RS07020 PF00410 Ribosomal protein S8 DC090_RS07025 PF00347 Ribosomal protein L6 DC090_RS07030 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DC090_RS07035 PF03719 Ribosomal protein S5, C-terminal domain DC090_RS07035 PF00333 Ribosomal protein S5, N-terminal domain DC090_RS07040 PF00327 Ribosomal protein L30p/L7e DC090_RS07045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DC090_RS07050 PF00344 SecY translocase DC090_RS07060 PF00557 Metallopeptidase family M24 DC090_RS07065 PF01176 Translation initiation factor 1A / IF-1 DC090_RS07070 PF00444 Ribosomal protein L36 DC090_RS07075 PF00416 Ribosomal protein S13/S18 DC090_RS07080 PF00411 Ribosomal protein S11 DC090_RS07085 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DC090_RS07085 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DC090_RS07085 PF01000 RNA polymerase Rpb3/RpoA insert domain DC090_RS07090 PF01196 Ribosomal protein L17 DC090_RS07095 PF04461 Protein of unknown function (DUF520) DC090_RS07105 PF13411 MerR HTH family regulatory protein DC090_RS07105 PF07739 TipAS antibiotic-recognition domain DC090_RS07110 PF00005 ABC transporter DC090_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS07125 PF00480 ROK family DC090_RS07130 PF01416 tRNA pseudouridine synthase DC090_RS07140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DC090_RS07140 PF03466 LysR substrate binding domain DC090_RS07150 PF12558 ATP-binding cassette cobalt transporter DC090_RS07150 PF00005 ABC transporter DC090_RS07155 PF07155 ECF-type riboflavin transporter, S component DC090_RS07165 PF00572 Ribosomal protein L13 DC090_RS07170 PF00380 Ribosomal protein S9/S16 DC090_RS07175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DC090_RS07175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DC090_RS07175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DC090_RS07175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DC090_RS07180 PF00485 Phosphoribulokinase / Uridine kinase family DC090_RS07185 PF01380 SIS domain DC090_RS07190 PF01256 Carbohydrate kinase DC090_RS07190 PF03853 YjeF-related protein N-terminus DC090_RS07195 PF01168 Alanine racemase, N-terminal domain DC090_RS07195 PF00842 Alanine racemase, C-terminal domain DC090_RS07200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DC090_RS07210 PF00814 Glycoprotease family DC090_RS07225 PF02910 Fumarate reductase flavoprotein C-term DC090_RS07225 PF00890 FAD binding domain DC090_RS07230 PF13183 4Fe-4S dicluster domain DC090_RS07230 PF13085 2Fe-2S iron-sulfur cluster binding domain DC090_RS07240 PF00209 Sodium:neurotransmitter symporter family DC090_RS07245 PF00814 Glycoprotease family DC090_RS07250 PF02535 ZIP Zinc transporter DC090_RS07265 PF00166 Chaperonin 10 Kd subunit DC090_RS07275 PF00731 AIR carboxylase DC090_RS07280 PF01259 SAICAR synthetase DC090_RS07285 PF13537 Glutamine amidotransferase domain DC090_RS07285 PF00156 Phosphoribosyl transferase domain DC090_RS07290 PF00586 AIR synthase related protein, N-terminal domain DC090_RS07290 PF02769 AIR synthase related protein, C-terminal domain DC090_RS07295 PF00551 Formyl transferase DC090_RS07300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DC090_RS07300 PF02843 Phosphoribosylglycinamide synthetase, C domain DC090_RS07300 PF02844 Phosphoribosylglycinamide synthetase, N domain DC090_RS07305 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DC090_RS07305 PF02769 AIR synthase related protein, C-terminal domain DC090_RS07305 PF00586 AIR synthase related protein, N-terminal domain DC090_RS07315 PF02467 Transcription factor WhiB DC090_RS07320 PF00478 IMP dehydrogenase / GMP reductase domain DC090_RS07320 PF00571 CBS domain DC090_RS07330 PF00478 IMP dehydrogenase / GMP reductase domain DC090_RS07335 PF00206 Lyase DC090_RS07335 PF10415 Fumarase C C-terminus DC090_RS07345 PF00005 ABC transporter DC090_RS07360 PF00871 Acetokinase family DC090_RS07365 PF01515 Phosphate acetyl/butaryl transferase DC090_RS07365 PF07085 DRTGG domain DC090_RS07370 PF00849 RNA pseudouridylate synthase DC090_RS07375 PF02540 NAD synthase DC090_RS07375 PF00958 GMP synthase C terminal domain DC090_RS07375 PF00117 Glutamine amidotransferase class-I DC090_RS07390 PF00589 Phage integrase family DC090_RS07390 PF02899 Phage integrase, N-terminal SAM-like domain DC090_RS07425 PF04055 Radical SAM superfamily DC090_RS07430 PF01610 Transposase DC090_RS07430 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DC090_RS07430 PF13542 Helix-turn-helix domain of transposase family ISL3 DC090_RS07435 PF00665 Integrase core domain DC090_RS07440 PF01695 IstB-like ATP binding protein DC090_RS07455 PF12102 Domain of unknown function (DUF3578) DC090_RS07455 PF07728 AAA domain (dynein-related subfamily) DC090_RS07460 PF00679 Elongation factor G C-terminus DC090_RS07460 PF14492 Elongation Factor G, domain II DC090_RS07460 PF00009 Elongation factor Tu GTP binding domain DC090_RS07460 PF03764 Elongation factor G, domain IV DC090_RS07500 PF00877 NlpC/P60 family DC090_RS07520 PF02534 Type IV secretory system Conjugative DNA transfer DC090_RS07535 PF01695 IstB-like ATP binding protein DC090_RS07535 PF07319 Primosomal protein DnaI N-terminus DC090_RS07560 PF10437 Bacterial lipoate protein ligase C-terminus DC090_RS07560 PF03099 Biotin/lipoate A/B protein ligase family DC090_RS07580 PF01022 Bacterial regulatory protein, arsR family DC090_RS07610 PF00580 UvrD/REP helicase N-terminal domain DC090_RS07610 PF13361 UvrD-like helicase C-terminal domain DC090_RS07615 PF01757 Acyltransferase family DC090_RS07620 PF08442 ATP-grasp domain DC090_RS07620 PF00549 CoA-ligase DC090_RS07625 PF00549 CoA-ligase DC090_RS07625 PF02629 CoA binding domain DC090_RS07640 PF01808 AICARFT/IMPCHase bienzyme DC090_RS07640 PF02142 MGS-like domain DC090_RS07650 PF00365 Phosphofructokinase DC090_RS07655 PF00342 Phosphoglucose isomerase DC090_RS07675 PF00561 alpha/beta hydrolase fold DC090_RS07675 PF08386 TAP-like protein DC090_RS07700 PF13936 Helix-turn-helix domain DC090_RS07700 PF00665 Integrase core domain DC090_RS07705 PF00665 Integrase core domain DC090_RS07705 PF13936 Helix-turn-helix domain DC090_RS07720 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DC090_RS07720 PF00056 lactate/malate dehydrogenase, NAD binding domain DC090_RS07740 PF07859 alpha/beta hydrolase fold DC090_RS07745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DC090_RS07745 PF02770 Acyl-CoA dehydrogenase, middle domain DC090_RS07745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DC090_RS07750 PF02515 CoA-transferase family III DC090_RS07755 PF00501 AMP-binding enzyme DC090_RS07755 PF13193 AMP-binding enzyme C-terminal domain DC090_RS07760 PF01575 MaoC like domain DC090_RS07765 PF00083 Sugar (and other) transporter DC090_RS07770 PF00753 Metallo-beta-lactamase superfamily DC090_RS07785 PF01012 Electron transfer flavoprotein domain DC090_RS07785 PF00766 Electron transfer flavoprotein FAD-binding domain DC090_RS07790 PF01494 FAD binding domain DC090_RS07800 PF00754 F5/8 type C domain DC090_RS07800 PF13088 BNR repeat-like domain DC090_RS07800 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DC090_RS07810 PF02785 Biotin carboxylase C-terminal domain DC090_RS07810 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DC090_RS07810 PF00289 Biotin carboxylase, N-terminal domain DC090_RS07810 PF00364 Biotin-requiring enzyme DC090_RS07815 PF01039 Carboxyl transferase domain DC090_RS07820 PF00698 Acyl transferase domain DC090_RS07825 PF01648 4'-phosphopantetheinyl transferase superfamily DC090_RS07830 PF02632 BioY family DC090_RS07835 PF00551 Formyl transferase DC090_RS07840 PF00464 Serine hydroxymethyltransferase DC090_RS07845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DC090_RS07845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DC090_RS07860 PF01050 Mannose-6-phosphate isomerase DC090_RS07860 PF00483 Nucleotidyl transferase DC090_RS07865 PF02608 ABC transporter substrate-binding protein PnrA-like DC090_RS07870 PF00005 ABC transporter DC090_RS07875 PF02653 Branched-chain amino acid transport system / permease component DC090_RS07880 PF02653 Branched-chain amino acid transport system / permease component DC090_RS07885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DC090_RS07890 PF02885 Glycosyl transferase family, helical bundle domain DC090_RS07890 PF00591 Glycosyl transferase family, a/b domain DC090_RS07890 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DC090_RS07900 PF01791 DeoC/LacD family aldolase DC090_RS07905 PF07690 Major Facilitator Superfamily DC090_RS07910 PF00440 Bacterial regulatory proteins, tetR family DC090_RS07915 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DC090_RS07915 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DC090_RS07915 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DC090_RS07915 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DC090_RS07920 PF01048 Phosphorylase superfamily DC090_RS07925 PF03641 Possible lysine decarboxylase DC090_RS07935 PF01596 O-methyltransferase DC090_RS07940 PF01883 Iron-sulfur cluster assembly protein DC090_RS07940 PF10609 NUBPL iron-transfer P-loop NTPase DC090_RS07950 PF03448 MgtE intracellular N domain DC090_RS07950 PF00571 CBS domain DC090_RS07950 PF01769 Divalent cation transporter DC090_RS07955 PF00557 Metallopeptidase family M24 DC090_RS07955 PF05195 Aminopeptidase P, N-terminal domain DC090_RS07965 PF01914 MarC family integral membrane protein DC090_RS07970 PF00271 Helicase conserved C-terminal domain DC090_RS07970 PF00270 DEAD/DEAH box helicase DC090_RS07985 PF13361 UvrD-like helicase C-terminal domain DC090_RS07985 PF00580 UvrD/REP helicase N-terminal domain DC090_RS07995 PF00437 Type II/IV secretion system protein DC090_RS08030 PF03462 PCRF domain DC090_RS08030 PF00472 RF-1 domain DC090_RS08035 PF00005 ABC transporter DC090_RS08040 PF18075 FtsX extracellular domain DC090_RS08040 PF02687 FtsX-like permease family DC090_RS08045 PF04225 Opacity-associated protein A LysM-like domain DC090_RS08045 PF01551 Peptidase family M23 DC090_RS08050 PF01668 SmpB protein DC090_RS08055 PF13344 Haloacid dehalogenase-like hydrolase DC090_RS08060 PF17676 LD-carboxypeptidase C-terminal domain DC090_RS08060 PF02016 LD-carboxypeptidase N-terminal domain DC090_RS08085 PF00005 ABC transporter DC090_RS08085 PF17755 UvrA DNA-binding domain DC090_RS08085 PF17760 UvrA interaction domain DC090_RS08090 PF17760 UvrA interaction domain DC090_RS08090 PF17755 UvrA DNA-binding domain DC090_RS08095 PF01047 MarR family DC090_RS08120 PF02225 PA domain DC090_RS08120 PF00082 Subtilase family DC090_RS08120 PF06280 Fn3-like domain DC090_RS08120 PF00746 LPXTG cell wall anchor motif DC090_RS08135 PF02540 NAD synthase DC090_RS08150 PF06826 Predicted Permease Membrane Region DC090_RS08150 PF02080 TrkA-C domain DC090_RS08155 PF00216 Bacterial DNA-binding protein DC090_RS08165 PF04851 Type III restriction enzyme, res subunit DC090_RS08170 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DC090_RS08170 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DC090_RS08175 PF02617 ATP-dependent Clp protease adaptor protein ClpS DC090_RS08185 PF01177 Asp/Glu/Hydantoin racemase DC090_RS08190 PF12706 Beta-lactamase superfamily domain DC090_RS08195 PF01138 3' exoribonuclease family, domain 1 DC090_RS08195 PF03725 3' exoribonuclease family, domain 2 DC090_RS08200 PF01725 Ham1 family DC090_RS08215 PF00578 AhpC/TSA family DC090_RS08225 PF00501 AMP-binding enzyme DC090_RS08230 PF01557 Fumarylacetoacetate (FAA) hydrolase family DC090_RS08235 PF00155 Aminotransferase class I and II DC090_RS08240 PF00749 tRNA synthetases class I (E and Q), catalytic domain DC090_RS08250 PF00356 Bacterial regulatory proteins, lacI family DC090_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS08285 PF01432 Peptidase family M3 DC090_RS08290 PF06800 Sugar transport protein DC090_RS08300 PF00534 Glycosyl transferases group 1 DC090_RS08300 PF13439 Glycosyltransferase Family 4 DC090_RS08310 PF03577 Peptidase family C69 DC090_RS08320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DC090_RS08325 PF01820 D-ala D-ala ligase N-terminus DC090_RS08325 PF07478 D-ala D-ala ligase C-terminus DC090_RS08330 PF03358 NADPH-dependent FMN reductase DC090_RS08335 PF00586 AIR synthase related protein, N-terminal domain DC090_RS08335 PF02769 AIR synthase related protein, C-terminal domain DC090_RS08345 PF00830 Ribosomal L28 family DC090_RS08350 PF00271 Helicase conserved C-terminal domain DC090_RS08350 PF17191 RecG wedge domain DC090_RS08350 PF00270 DEAD/DEAH box helicase DC090_RS08360 PF01467 Cytidylyltransferase-like DC090_RS08370 PF02620 Large ribosomal RNA subunit accumulation protein YceD DC090_RS08375 PF14622 Ribonuclease-III-like DC090_RS08375 PF00035 Double-stranded RNA binding motif DC090_RS08380 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DC090_RS08380 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DC090_RS08380 PF06827 Zinc finger found in FPG and IleRS DC090_RS08385 PF00196 Bacterial regulatory proteins, luxR family DC090_RS08385 PF00072 Response regulator receiver domain DC090_RS08390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS08390 PF13192 Thioredoxin domain DC090_RS08395 PF00578 AhpC/TSA family DC090_RS08395 PF10417 C-terminal domain of 1-Cys peroxiredoxin DC090_RS08400 PF00005 ABC transporter DC090_RS08400 PF00664 ABC transporter transmembrane region DC090_RS08405 PF00664 ABC transporter transmembrane region DC090_RS08405 PF00005 ABC transporter DC090_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS08410 PF07730 Histidine kinase DC090_RS08410 PF13185 GAF domain DC090_RS08415 PF00664 ABC transporter transmembrane region DC090_RS08415 PF00005 ABC transporter DC090_RS08420 PF00664 ABC transporter transmembrane region DC090_RS08420 PF00005 ABC transporter DC090_RS08425 PF02322 Cytochrome bd terminal oxidase subunit II DC090_RS08430 PF01654 Cytochrome bd terminal oxidase subunit I DC090_RS08440 PF10150 Ribonuclease E/G family DC090_RS08445 PF00829 Ribosomal prokaryotic L21 protein DC090_RS08450 PF01016 Ribosomal L27 protein DC090_RS08455 PF01926 50S ribosome-binding GTPase DC090_RS08455 PF09269 Domain of unknown function (DUF1967) DC090_RS08455 PF01018 GTP1/OBG DC090_RS08465 PF00085 Thioredoxin DC090_RS08470 PF01467 Cytidylyltransferase-like DC090_RS08485 PF00300 Histidine phosphatase superfamily (branch 1) DC090_RS08510 PF07882 L-fucose isomerase, second N-terminal domain DC090_RS08510 PF07881 L-fucose isomerase, first N-terminal domain DC090_RS08510 PF02952 L-fucose isomerase, C-terminal domain DC090_RS08520 PF00596 Class II Aldolase and Adducin N-terminal domain DC090_RS08525 PF07690 Major Facilitator Superfamily DC090_RS08530 PF05025 RbsD / FucU transport protein family DC090_RS08535 PF00356 Bacterial regulatory proteins, lacI family DC090_RS08540 PF00291 Pyridoxal-phosphate dependent enzyme DC090_RS08545 PF01522 Polysaccharide deacetylase DC090_RS08565 PF16555 Gram-positive pilin subunit D1, N-terminal domain DC090_RS08565 PF00746 LPXTG cell wall anchor motif DC090_RS08590 PF00392 Bacterial regulatory proteins, gntR family DC090_RS08595 PF01680 SOR/SNZ family DC090_RS08605 PF01136 Peptidase family U32 DC090_RS08605 PF16325 Peptidase family U32 C-terminal domain DC090_RS08610 PF03591 AzlC protein DC090_RS08620 PF00324 Amino acid permease DC090_RS08625 PF03180 NLPA lipoprotein DC090_RS08630 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS08635 PF09383 NIL domain DC090_RS08635 PF00005 ABC transporter DC090_RS08640 PF05681 Fumarate hydratase (Fumerase) DC090_RS08640 PF05683 Fumarase C-terminus DC090_RS08645 PF00324 Amino acid permease DC090_RS08655 PF01381 Helix-turn-helix DC090_RS08665 PF01569 PAP2 superfamily DC090_RS08675 PF00294 pfkB family carbohydrate kinase DC090_RS08680 PF00950 ABC 3 transport family DC090_RS08685 PF00005 ABC transporter DC090_RS08695 PF01297 Zinc-uptake complex component A periplasmic DC090_RS08705 PF01022 Bacterial regulatory protein, arsR family DC090_RS08715 PF00265 Thymidine kinase DC090_RS08720 PF00950 ABC 3 transport family DC090_RS08720 PF02742 Iron dependent repressor, metal binding and dimerisation domain DC090_RS08725 PF01048 Phosphorylase superfamily DC090_RS08730 PF01594 AI-2E family transporter DC090_RS08745 PF01230 HIT domain DC090_RS08750 PF09334 tRNA synthetases class I (M) DC090_RS08750 PF13603 Leucyl-tRNA synthetase, Domain 2 DC090_RS08750 PF08264 Anticodon-binding domain of tRNA DC090_RS08765 PF05872 Bacterial protein of unknown function (DUF853) DC090_RS08785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DC090_RS08785 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DC090_RS08785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DC090_RS08790 PF02233 NAD(P) transhydrogenase beta subunit DC090_RS08795 PF01649 Ribosomal protein S20 DC090_RS08820 PF06421 GTP-binding protein LepA C-terminus DC090_RS08820 PF00679 Elongation factor G C-terminus DC090_RS08820 PF00009 Elongation factor Tu GTP binding domain DC090_RS08825 PF02390 Putative methyltransferase DC090_RS08830 PF04055 Radical SAM superfamily DC090_RS08845 PF01628 HrcA protein C terminal domain DC090_RS08845 PF08220 DeoR-like helix-turn-helix domain DC090_RS08850 PF01556 DnaJ C terminal domain DC090_RS08850 PF00226 DnaJ domain DC090_RS08850 PF00684 DnaJ central domain DC090_RS08855 PF04452 RNA methyltransferase DC090_RS08860 PF02562 PhoH-like protein DC090_RS08865 PF02130 Uncharacterized protein family UPF0054 DC090_RS08870 PF03471 Transporter associated domain DC090_RS08870 PF01595 Cyclin M transmembrane N-terminal domain DC090_RS08870 PF00571 CBS domain DC090_RS08875 PF07650 KH domain DC090_RS08875 PF01926 50S ribosome-binding GTPase DC090_RS08895 PF13191 AAA ATPase domain DC090_RS08895 PF00069 Protein kinase domain DC090_RS08900 PF08502 LeuA allosteric (dimerisation) domain DC090_RS08900 PF00682 HMGL-like DC090_RS08905 PF11967 Recombination protein O N terminal DC090_RS08905 PF02565 Recombination protein O C terminal DC090_RS08910 PF01255 Putative undecaprenyl diphosphate synthase DC090_RS08915 PF00815 Histidinol dehydrogenase DC090_RS08920 PF00155 Aminotransferase class I and II DC090_RS08925 PF00475 Imidazoleglycerol-phosphate dehydratase DC090_RS08935 PF00117 Glutamine amidotransferase class-I DC090_RS08940 PF00977 Histidine biosynthesis protein DC090_RS08950 PF05198 Translation initiation factor IF-3, N-terminal domain DC090_RS08950 PF00707 Translation initiation factor IF-3, C-terminal domain DC090_RS08955 PF01632 Ribosomal protein L35 DC090_RS08960 PF00453 Ribosomal protein L20 DC090_RS08970 PF00588 SpoU rRNA Methylase family DC090_RS08970 PF08032 RNA 2'-O ribose methyltransferase substrate binding DC090_RS08975 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DC090_RS08980 PF01409 tRNA synthetases class II core domain (F) DC090_RS08980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DC090_RS08985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DC090_RS08985 PF01588 Putative tRNA binding domain DC090_RS08985 PF03483 B3/4 domain DC090_RS08985 PF03147 Ferredoxin-fold anticodon binding domain DC090_RS08985 PF03484 tRNA synthetase B5 domain DC090_RS08990 PF04073 Aminoacyl-tRNA editing domain DC090_RS08995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DC090_RS08995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DC090_RS09005 PF00202 Aminotransferase class-III DC090_RS09010 PF01316 Arginine repressor, DNA binding domain DC090_RS09010 PF02863 Arginine repressor, C-terminal domain DC090_RS09015 PF16363 GDP-mannose 4,6 dehydratase DC090_RS09025 PF01381 Helix-turn-helix DC090_RS09035 PF00005 ABC transporter DC090_RS09040 PF00579 tRNA synthetases class I (W and Y) DC090_RS09045 PF01297 Zinc-uptake complex component A periplasmic DC090_RS09050 PF00005 ABC transporter DC090_RS09055 PF00950 ABC 3 transport family DC090_RS09060 PF00950 ABC 3 transport family DC090_RS09090 PF18407 GCN5-related N-acetyltransferase like domain DC090_RS09090 PF13344 Haloacid dehalogenase-like hydrolase DC090_RS09095 PF01728 FtsJ-like methyltransferase DC090_RS09095 PF01479 S4 domain DC090_RS09100 PF01513 ATP-NAD kinase DC090_RS09105 PF02463 RecF/RecN/SMC N terminal domain DC090_RS09125 PF03023 Lipid II flippase MurJ DC090_RS09140 PF01458 Uncharacterized protein family (UPF0051) DC090_RS09145 PF01458 Uncharacterized protein family (UPF0051) DC090_RS09150 PF00355 Rieske [2Fe-2S] domain DC090_RS09155 PF00005 ABC transporter DC090_RS09160 PF00266 Aminotransferase class-V DC090_RS09170 PF01883 Iron-sulfur cluster assembly protein DC090_RS09175 PF00581 Rhodanese-like domain DC090_RS09180 PF12848 ABC transporter DC090_RS09180 PF00005 ABC transporter DC090_RS09185 PF00300 Histidine phosphatase superfamily (branch 1) DC090_RS09200 PF00005 ABC transporter DC090_RS09205 PF00483 Nucleotidyl transferase DC090_RS09210 PF13439 Glycosyltransferase Family 4 DC090_RS09210 PF00534 Glycosyl transferases group 1 DC090_RS09215 PF00005 ABC transporter DC090_RS09225 PF01145 SPFH domain / Band 7 family DC090_RS09230 PF00588 SpoU rRNA Methylase family DC090_RS09245 PF00588 SpoU rRNA Methylase family DC090_RS09250 PF01161 Phosphatidylethanolamine-binding protein DC090_RS09265 PF02811 PHP domain DC090_RS09265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DC090_RS09265 PF01336 OB-fold nucleic acid binding domain DC090_RS09265 PF07733 Bacterial DNA polymerase III alpha NTPase domain DC090_RS09265 PF14579 Helix-hairpin-helix motif DC090_RS09285 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DC090_RS09285 PF08501 Shikimate dehydrogenase substrate binding domain DC090_RS09290 PF00117 Glutamine amidotransferase class-I DC090_RS09290 PF02540 NAD synthase DC090_RS09290 PF00958 GMP synthase C terminal domain DC090_RS09295 PF04107 Glutamate-cysteine ligase family 2(GCS2) DC090_RS09300 PF07687 Peptidase dimerisation domain DC090_RS09300 PF01546 Peptidase family M20/M25/M40 DC090_RS09315 PF02673 Bacitracin resistance protein BacA DC090_RS09320 PF13419 Haloacid dehalogenase-like hydrolase DC090_RS09330 PF08704 tRNA methyltransferase complex GCD14 subunit DC090_RS09335 PF17758 Proteasomal ATPase OB N-terminal domain DC090_RS09335 PF00004 ATPase family associated with various cellular activities (AAA) DC090_RS09335 PF16450 Proteasomal ATPase OB C-terminal domain DC090_RS09340 PF03136 Pup-ligase protein DC090_RS09345 PF05639 Pup-like protein DC090_RS09350 PF03136 Pup-ligase protein DC090_RS09365 PF00977 Histidine biosynthesis protein DC090_RS09370 PF01502 Phosphoribosyl-AMP cyclohydrolase DC090_RS09375 PF00218 Indole-3-glycerol phosphate synthase DC090_RS09380 PF01790 Prolipoprotein diacylglyceryl transferase DC090_RS09385 PF02887 Pyruvate kinase, alpha/beta domain DC090_RS09385 PF00224 Pyruvate kinase, barrel domain DC090_RS09395 PF00072 Response regulator receiver domain DC090_RS09395 PF03861 ANTAR domain DC090_RS09405 PF00476 DNA polymerase family A DC090_RS09405 PF01367 5'-3' exonuclease, C-terminal SAM fold DC090_RS09405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DC090_RS09410 PF00575 S1 RNA binding domain DC090_RS09420 PF00005 ABC transporter DC090_RS09425 PF01470 Pyroglutamyl peptidase DC090_RS09430 PF01121 Dephospho-CoA kinase DC090_RS09435 PF02151 UvrB/uvrC motif DC090_RS09435 PF12344 Ultra-violet resistance protein B DC090_RS09435 PF00271 Helicase conserved C-terminal domain DC090_RS09435 PF17757 UvrB interaction domain DC090_RS09435 PF04851 Type III restriction enzyme, res subunit DC090_RS09440 PF03741 Integral membrane protein TerC family DC090_RS09445 PF13593 SBF-like CPA transporter family (DUF4137) DC090_RS09455 PF00005 ABC transporter DC090_RS09455 PF17755 UvrA DNA-binding domain DC090_RS09455 PF17760 UvrA interaction domain DC090_RS09460 PF02151 UvrB/uvrC motif DC090_RS09460 PF08459 UvrC Helix-hairpin-helix N-terminal DC090_RS09460 PF01541 GIY-YIG catalytic domain DC090_RS09465 PF03668 P-loop ATPase protein family DC090_RS09470 PF01933 Uncharacterised protein family UPF0052 DC090_RS09475 PF14527 WhiA LAGLIDADG-like domain DC090_RS09475 PF02650 WhiA C-terminal HTH domain DC090_RS09475 PF10298 WhiA N-terminal LAGLIDADG-like domain DC090_RS09480 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DC090_RS09480 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DC090_RS09485 PF00162 Phosphoglycerate kinase DC090_RS09490 PF00121 Triosephosphate isomerase DC090_RS09495 PF03840 Preprotein translocase SecG subunit DC090_RS09505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DC090_RS09505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DC090_RS09510 PF00923 Transaldolase/Fructose-6-phosphate aldolase DC090_RS09515 PF00456 Transketolase, thiamine diphosphate binding domain DC090_RS09515 PF02780 Transketolase, C-terminal domain DC090_RS09515 PF02779 Transketolase, pyrimidine binding domain DC090_RS09520 PF02899 Phage integrase, N-terminal SAM-like domain DC090_RS09520 PF00589 Phage integrase family DC090_RS09525 PF13614 AAA domain DC090_RS09530 PF02616 Segregation and condensation protein ScpA DC090_RS09535 PF04079 Segregation and condensation complex subunit ScpB DC090_RS09540 PF01479 S4 domain DC090_RS09540 PF00849 RNA pseudouridylate synthase DC090_RS09550 PF01926 50S ribosome-binding GTPase DC090_RS09550 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DC090_RS09555 PF00365 Phosphofructokinase DC090_RS09570 PF01433 Peptidase family M1 domain DC090_RS09570 PF11838 ERAP1-like C-terminal domain DC090_RS09575 PF00498 FHA domain DC090_RS09585 PF13411 MerR HTH family regulatory protein DC090_RS09595 PF13397 RNA polymerase-binding protein DC090_RS09600 PF00535 Glycosyl transferase family 2 DC090_RS09605 PF00795 Carbon-nitrogen hydrolase DC090_RS09605 PF00535 Glycosyl transferase family 2 DC090_RS09610 PF00270 DEAD/DEAH box helicase DC090_RS09610 PF08148 DSHCT (NUC185) domain DC090_RS09610 PF00271 Helicase conserved C-terminal domain DC090_RS09615 PF00781 Diacylglycerol kinase catalytic domain DC090_RS09640 PF08029 HisG, C-terminal domain DC090_RS09640 PF01634 ATP phosphoribosyltransferase DC090_RS09645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DC090_RS09650 PF09084 NMT1/THI5 like DC090_RS09655 PF00528 Binding-protein-dependent transport system inner membrane component DC090_RS09660 PF00834 Ribulose-phosphate 3 epimerase family DC090_RS09665 PF01029 NusB family DC090_RS09665 PF01189 16S rRNA methyltransferase RsmB/F DC090_RS09670 PF00551 Formyl transferase DC090_RS09670 PF02911 Formyl transferase, C-terminal domain DC090_RS09675 PF17764 3′ DNA-binding domain (3′BD) DC090_RS09680 PF02773 S-adenosylmethionine synthetase, C-terminal domain DC090_RS09680 PF02772 S-adenosylmethionine synthetase, central domain DC090_RS09680 PF00438 S-adenosylmethionine synthetase, N-terminal domain DC090_RS09685 PF02441 Flavoprotein DC090_RS09685 PF04127 DNA / pantothenate metabolism flavoprotein DC090_RS09690 PF01192 RNA polymerase Rpb6 DC090_RS09695 PF00625 Guanylate kinase DC090_RS09705 PF02142 MGS-like domain DC090_RS09705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DC090_RS09705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DC090_RS09710 PF00117 Glutamine amidotransferase class-I DC090_RS09710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DC090_RS09715 PF01029 NusB family DC090_RS09720 PF08207 Elongation factor P (EF-P) KOW-like domain DC090_RS09720 PF01132 Elongation factor P (EF-P) OB domain DC090_RS09720 PF09285 Elongation factor P, C-terminal DC090_RS09725 PF00403 Heavy-metal-associated domain DC090_RS09730 PF01202 Shikimate kinase DC090_RS09735 PF01761 3-dehydroquinate synthase DC090_RS09735 PF01202 Shikimate kinase DC090_RS09740 PF01264 Chorismate synthase DC090_RS09760 PF03652 Holliday junction resolvase DC090_RS09765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DC090_RS09765 PF01411 tRNA synthetases class II (A) DC090_RS09765 PF02272 DHHA1 domain DC090_RS09775 PF00163 Ribosomal protein S4/S9 N-terminal domain DC090_RS09775 PF01479 S4 domain DC090_RS09780 PF16193 AAA C-terminal domain DC090_RS09780 PF00004 ATPase family associated with various cellular activities (AAA) DC090_RS09780 PF12002 MgsA AAA+ ATPase C terminal DC090_RS09785 PF03176 MMPL family DC090_RS09800 PF01336 OB-fold nucleic acid binding domain DC090_RS09800 PF00152 tRNA synthetases class II (D, K and N) DC090_RS09800 PF02938 GAD domain DC090_RS09810 PF00271 Helicase conserved C-terminal domain DC090_RS09810 PF03880 DbpA RNA binding domain DC090_RS09810 PF00270 DEAD/DEAH box helicase DC090_RS09820 PF07650 KH domain DC090_RS09820 PF01926 50S ribosome-binding GTPase DC090_RS09825 PF07650 KH domain DC090_RS09825 PF01926 50S ribosome-binding GTPase DC090_RS09830 PF03129 Anticodon binding domain DC090_RS09830 PF13393 Histidyl-tRNA synthetase DC090_RS09835 PF00753 Metallo-beta-lactamase superfamily DC090_RS09840 PF03993 Domain of Unknown Function (DUF349) DC090_RS09850 PF04607 Region found in RelA / SpoT proteins DC090_RS09850 PF13291 ACT domain DC090_RS09850 PF02824 TGS domain DC090_RS09855 PF00156 Phosphoribosyl transferase domain DC090_RS09860 PF02355 Protein export membrane protein DC090_RS09860 PF07549 SecD/SecF GG Motif DC090_RS09865 PF02355 Protein export membrane protein DC090_RS09865 PF07549 SecD/SecF GG Motif DC090_RS09875 PF05496 Holliday junction DNA helicase RuvB P-loop domain DC090_RS09875 PF17864 RuvB AAA lid domain DC090_RS09875 PF05491 RuvB C-terminal winged helix domain DC090_RS09880 PF07499 RuvA, C-terminal domain DC090_RS09880 PF01330 RuvA N terminal domain DC090_RS09885 PF02075 Crossover junction endodeoxyribonuclease RuvC DC090_RS09890 PF01709 Transcriptional regulator DC090_RS09895 PF00293 NUDIX domain DC090_RS09905 PF13439 Glycosyltransferase Family 4 DC090_RS09915 PF01066 CDP-alcohol phosphatidyltransferase DC090_RS09920 PF03129 Anticodon binding domain DC090_RS09920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DC090_RS09920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DC090_RS09925 PF03315 Serine dehydratase beta chain DC090_RS09925 PF03313 Serine dehydratase alpha chain DC090_RS09930 PF00072 Response regulator receiver domain DC090_RS09930 PF00196 Bacterial regulatory proteins, luxR family DC090_RS09950 PF05922 Peptidase inhibitor I9 DC090_RS09950 PF00082 Subtilase family DC090_RS09975 PF00128 Alpha amylase, catalytic domain DC090_RS09975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DC090_RS09980 PF00128 Alpha amylase, catalytic domain DC090_RS09985 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DC090_RS09985 PF00128 Alpha amylase, catalytic domain DC090_RS10000 PF02780 Transketolase, C-terminal domain DC090_RS10000 PF02779 Transketolase, pyrimidine binding domain DC090_RS10000 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DC090_RS10010 PF00330 Aconitase family (aconitate hydratase) DC090_RS10010 PF00694 Aconitase C-terminal domain DC090_RS10015 PF05958 tRNA (Uracil-5-)-methyltransferase DC090_RS10025 PF02254 TrkA-N domain DC090_RS10025 PF02080 TrkA-C domain DC090_RS10030 PF02254 TrkA-N domain DC090_RS10030 PF02080 TrkA-C domain DC090_RS10070 PF03989 DNA gyrase C-terminal domain, beta-propeller DC090_RS10070 PF00521 DNA gyrase/topoisomerase IV, subunit A DC090_RS10085 PF01751 Toprim domain DC090_RS10085 PF00986 DNA gyrase B subunit, carboxyl terminus DC090_RS10085 PF00204 DNA gyrase B DC090_RS10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DC090_RS10095 PF00929 Exonuclease DC090_RS10095 PF04851 Type III restriction enzyme, res subunit DC090_RS10095 PF13307 Helicase C-terminal domain DC090_RS10100 PF04545 Sigma-70, region 4 DC090_RS10100 PF04539 Sigma-70 region 3 DC090_RS10100 PF04542 Sigma-70 region 2 DC090_RS10100 PF00140 Sigma-70 factor, region 1.2 DC090_RS10115 PF00348 Polyprenyl synthetase DC090_RS10125 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DC090_RS10125 PF01464 Transglycosylase SLT domain DC090_RS10130 PF03793 PASTA domain DC090_RS10130 PF00069 Protein kinase domain DC090_RS10135 PF01474 Class-II DAHP synthetase family DC090_RS10140 PF00365 Phosphofructokinase DC090_RS10150 PF01541 GIY-YIG catalytic domain DC090_RS10150 PF00929 Exonuclease DC090_RS10160 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DC090_RS10160 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DC090_RS10170 PF01521 Iron-sulphur cluster biosynthesis DC090_RS10180 PF01546 Peptidase family M20/M25/M40 DC090_RS10180 PF07687 Peptidase dimerisation domain DC090_RS10195 PF00883 Cytosol aminopeptidase family, catalytic domain DC090_RS10195 PF02789 Cytosol aminopeptidase family, N-terminal domain DC090_RS10205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DC090_RS10205 PF07992 Pyridine nucleotide-disulphide oxidoreductase DC090_RS10210 PF02817 e3 binding domain DC090_RS10210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DC090_RS10210 PF00364 Biotin-requiring enzyme DC090_RS10230 PF00120 Glutamine synthetase, catalytic domain DC090_RS10230 PF03951 Glutamine synthetase, beta-Grasp domain DC090_RS10240 PF08335 GlnD PII-uridylyltransferase DC090_RS10240 PF03710 Glutamate-ammonia ligase adenylyltransferase DC090_RS10245 PF03951 Glutamine synthetase, beta-Grasp domain DC090_RS10245 PF00120 Glutamine synthetase, catalytic domain DC090_RS10255 PF00557 Metallopeptidase family M24 DC090_RS10260 PF00480 ROK family DC090_RS10270 PF03883 Peroxide stress protein YaaA DC090_RS10280 PF01784 NIF3 (NGG1p interacting factor 3) DC090_RS10285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DC090_RS10290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DC090_RS10300 PF00128 Alpha amylase, catalytic domain DC090_RS10300 PF02806 Alpha amylase, C-terminal all-beta domain DC090_RS10300 PF03714 Bacterial pullanase-associated domain DC090_RS10315 PF17831 Pyruvate dehydrogenase E1 component middle domain DC090_RS10315 PF00456 Transketolase, thiamine diphosphate binding domain DC090_RS10320 PF00005 ABC transporter DC090_RS10320 PF00664 ABC transporter transmembrane region DC090_RS10325 PF00664 ABC transporter transmembrane region DC090_RS10325 PF00005 ABC transporter DC090_RS10330 PF13419 Haloacid dehalogenase-like hydrolase DC090_RS10335 PF01300 Telomere recombination DC090_RS10355 PF08338 Domain of unknown function (DUF1731) DC090_RS10355 PF01370 NAD dependent epimerase/dehydratase family DC090_RS10360 PF01327 Polypeptide deformylase DC090_RS10390 PF00005 ABC transporter DC090_RS10395 PF01032 FecCD transport family DC090_RS10425 PF02416 mttA/Hcf106 family DC090_RS10430 PF02416 mttA/Hcf106 family DC090_RS10435 PF00902 Sec-independent protein translocase protein (TatC) DC090_RS10445 PF13662 Toprim domain DC090_RS10445 PF08275 DNA primase catalytic core, N-terminal domain DC090_RS10445 PF01807 CHC2 zinc finger DC090_RS10445 PF08278 DNA primase DnaG DnaB-binding DC090_RS10445 PF10410 DnaB-helicase binding domain of primase DC090_RS10450 PF01966 HD domain DC090_RS10450 PF13286 Phosphohydrolase-associated domain DC090_RS10460 PF01207 Dihydrouridine synthase (Dus) DC090_RS10470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DC090_RS10470 PF03129 Anticodon binding domain DC090_RS10480 PF00005 ABC transporter DC090_RS10485 PF00950 ABC 3 transport family DC090_RS10490 PF01475 Ferric uptake regulator family DC090_RS10505 PF07733 Bacterial DNA polymerase III alpha NTPase domain DC090_RS10505 PF14579 Helix-hairpin-helix motif DC090_RS10505 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DC090_RS10505 PF02811 PHP domain DC090_RS10515 PF00849 RNA pseudouridylate synthase DC090_RS10520 PF01252 Signal peptidase (SPase) II DC090_RS10535 PF04472 Cell division protein SepF DC090_RS10540 PF02578 Multi-copper polyphenol oxidoreductase laccase DC090_RS10545 PF00091 Tubulin/FtsZ family, GTPase domain DC090_RS10545 PF12327 FtsZ family, C-terminal domain DC090_RS10555 PF01225 Mur ligase family, catalytic domain DC090_RS10555 PF02875 Mur ligase family, glutamate ligase domain DC090_RS10555 PF08245 Mur ligase middle domain DC090_RS10560 PF04101 Glycosyltransferase family 28 C-terminal domain DC090_RS10560 PF03033 Glycosyltransferase family 28 N-terminal domain DC090_RS10565 PF01098 Cell cycle protein DC090_RS10570 PF02875 Mur ligase family, glutamate ligase domain DC090_RS10570 PF08245 Mur ligase middle domain DC090_RS10575 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DC090_RS10575 PF00953 Glycosyl transferase family 4 DC090_RS10580 PF08245 Mur ligase middle domain DC090_RS10580 PF01225 Mur ligase family, catalytic domain DC090_RS10580 PF02875 Mur ligase family, glutamate ligase domain DC090_RS10585 PF01225 Mur ligase family, catalytic domain DC090_RS10585 PF02875 Mur ligase family, glutamate ligase domain DC090_RS10585 PF08245 Mur ligase middle domain DC090_RS10590 PF00905 Penicillin binding protein transpeptidase domain DC090_RS10590 PF03717 Penicillin-binding Protein dimerisation domain DC090_RS10600 PF01795 MraW methylase family DC090_RS10605 PF02381 MraZ protein, putative antitoxin-like DC090_RS10615 PF11799 impB/mucB/samB family C-terminal domain DC090_RS10615 PF00817 impB/mucB/samB family DC090_RS10635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DC090_RS10635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DC090_RS10640 PF13193 AMP-binding enzyme C-terminal domain DC090_RS10640 PF00501 AMP-binding enzyme DC090_RS10645 PF03477 ATP cone domain DC090_RS10655 PF00717 Peptidase S24-like DC090_RS10655 PF01726 LexA DNA binding domain DC090_RS10660 PF13307 Helicase C-terminal domain DC090_RS10665 PF13167 GTP-binding GTPase N-terminal DC090_RS10665 PF01926 50S ribosome-binding GTPase DC090_RS10665 PF16360 GTP-binding GTPase Middle Region DC090_RS10670 PF08468 Methyltransferase small domain N-terminal DC090_RS10670 PF05175 Methyltransferase small domain DC090_RS10680 PF00919 Uncharacterized protein family UPF0004 DC090_RS10680 PF04055 Radical SAM superfamily DC090_RS10685 PF02631 RecX family DC090_RS10690 PF00154 recA bacterial DNA recombination protein DC090_RS10705 PF00994 Probable molybdopterin binding domain DC090_RS10705 PF02464 Competence-damaged protein DC090_RS10705 PF18146 Damage-inducible protein CinA KH domain DC090_RS10710 PF01066 CDP-alcohol phosphatidyltransferase DC090_RS10720 PF01580 FtsK/SpoIIIE family DC090_RS10720 PF09397 Ftsk gamma domain DC090_RS10720 PF17854 FtsK alpha domain DC090_RS10725 PF12706 Beta-lactamase superfamily domain DC090_RS10725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DC090_RS10725 PF17770 Ribonuclease J C-terminal domain DC090_RS10730 PF00701 Dihydrodipicolinate synthetase family DC090_RS10740 PF12419 SNF2 Helicase protein DC090_RS10740 PF00271 Helicase conserved C-terminal domain DC090_RS10740 PF00176 SNF2 family N-terminal domain DC090_RS10745 PF05173 Dihydrodipicolinate reductase, C-terminus DC090_RS10745 PF01113 Dihydrodipicolinate reductase, N-terminus DC090_RS10750 PF05193 Peptidase M16 inactive domain DC090_RS10750 PF00675 Insulinase (Peptidase family M16) DC090_RS10760 PF00013 KH domain DC090_RS10760 PF01138 3' exoribonuclease family, domain 1 DC090_RS10760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DC090_RS10760 PF00575 S1 RNA binding domain DC090_RS10765 PF00312 Ribosomal protein S15