CQ11_RS00025	PF13242	HAD-hyrolase-like
CQ11_RS00025	PF13344	Haloacid dehalogenase-like hydrolase
CQ11_RS00030	PF01479	S4 domain
CQ11_RS00030	PF01728	FtsJ-like methyltransferase
CQ11_RS00035	PF01513	ATP-NAD kinase
CQ11_RS00040	PF02463	RecF/RecN/SMC N terminal domain
CQ11_RS00045	PF12555	CQ11_RS00045
CQ11_RS00055	PF03023	CQ11_RS00055
CQ11_RS00060	PF00293	NUDIX domain
CQ11_RS00065	PF13412	Winged helix-turn-helix DNA-binding
CQ11_RS00070	PF01458	Uncharacterized protein family (UPF0051)
CQ11_RS00075	PF01458	Uncharacterized protein family (UPF0051)
CQ11_RS00080	PF00355	Rieske [2Fe-2S] domain
CQ11_RS00085	PF00005	ABC transporter
CQ11_RS00090	PF00266	Aminotransferase class-V
CQ11_RS00095	PF01592	NifU-like N terminal domain
CQ11_RS00100	PF01883	Domain of unknown function DUF59
CQ11_RS00105	PF00581	Rhodanese-like domain
CQ11_RS00110	PF00005	ABC transporter
CQ11_RS00110	PF12848	ABC transporter
CQ11_RS00115	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS00120	PF12710	haloacid dehalogenase-like hydrolase
CQ11_RS00125	PF09683	Bacteriocin (Lactococcin_972)
CQ11_RS00135	PF00005	ABC transporter
CQ11_RS00140	PF00483	Nucleotidyl transferase
CQ11_RS00145	PF00534	Glycosyl transferases group 1
CQ11_RS00145	PF13439	Glycosyltransferase Family 4
CQ11_RS00150	PF00005	ABC transporter
CQ11_RS00155	PF01957	NfeD-like C-terminal, partner-binding
CQ11_RS00160	PF01145	SPFH domain / Band 7 family
CQ11_RS00165	PF00588	SpoU rRNA Methylase family
CQ11_RS00170	PF01381	Helix-turn-helix
CQ11_RS00180	PF00588	SpoU rRNA Methylase family
CQ11_RS00185	PF01161	Phosphatidylethanolamine-binding protein
CQ11_RS00195	PF11799	impB/mucB/samB family C-terminal domain
CQ11_RS00200	PF02811	PHP domain
CQ11_RS00200	PF07733	Bacterial DNA polymerase III alpha subunit
CQ11_RS00200	PF14579	Helix-hairpin-helix motif
CQ11_RS00210	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CQ11_RS00220	PF08501	Shikimate dehydrogenase substrate binding domain
CQ11_RS00225	PF00117	Glutamine amidotransferase class-I
CQ11_RS00230	PF04107	Glutamate-cysteine ligase family 2(GCS2)
CQ11_RS00235	PF01546	Peptidase family M20/M25/M40
CQ11_RS00235	PF07687	Peptidase dimerisation domain
CQ11_RS00245	PF00248	Aldo/keto reductase family
CQ11_RS00250	PF02673	CQ11_RS00250
CQ11_RS00255	PF13419	Haloacid dehalogenase-like hydrolase
CQ11_RS00260	PF12705	PD-(D/E)XK nuclease superfamily
CQ11_RS00265	PF08704	tRNA methyltransferase complex GCD14 subunit
CQ11_RS00265	PF14801	tRNA methyltransferase complex GCD14 subunit N-term
CQ11_RS00270	PF00004	ATPase family associated with various cellular activities (AAA)
CQ11_RS00270	PF16450	CQ11_RS00270
CQ11_RS00275	PF03136	Pup-ligase protein
CQ11_RS00280	PF05639	Pup-like protein
CQ11_RS00285	PF03136	Pup-ligase protein
CQ11_RS00290	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CQ11_RS00300	PF00977	Histidine biosynthesis protein
CQ11_RS00305	PF01502	Phosphoribosyl-AMP cyclohydrolase
CQ11_RS00310	PF00218	Indole-3-glycerol phosphate synthase
CQ11_RS00315	PF01790	CQ11_RS00315
CQ11_RS00320	PF00224	Pyruvate kinase, barrel domain
CQ11_RS00320	PF02887	Pyruvate kinase, alpha/beta domain
CQ11_RS00330	PF00072	Response regulator receiver domain
CQ11_RS00330	PF03861	ANTAR domain
CQ11_RS00335	PF03061	Thioesterase superfamily
CQ11_RS00340	PF00476	DNA polymerase family A
CQ11_RS00340	PF01367	5'-3' exonuclease, C-terminal SAM fold
CQ11_RS00340	PF01612	3'-5' exonuclease
CQ11_RS00340	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CQ11_RS00345	PF00575	S1 RNA binding domain
CQ11_RS00360	PF00005	ABC transporter
CQ11_RS00365	PF01470	Pyroglutamyl peptidase
CQ11_RS00375	PF00271	Helicase conserved C-terminal domain
CQ11_RS00375	PF02151	UvrB/uvrC motif
CQ11_RS00375	PF04851	Type III restriction enzyme, res subunit
CQ11_RS00375	PF12344	Ultra-violet resistance protein B
CQ11_RS00380	PF03741	CQ11_RS00380
CQ11_RS00385	PF13593	SBF-like CPA transporter family (DUF4137)
CQ11_RS00390	PF03795	YCII-related domain
CQ11_RS00395	PF00005	ABC transporter
CQ11_RS00400	PF01541	GIY-YIG catalytic domain
CQ11_RS00400	PF02151	UvrB/uvrC motif
CQ11_RS00400	PF08459	UvrC Helix-hairpin-helix N-terminal
CQ11_RS00400	PF12826	Helix-hairpin-helix motif
CQ11_RS00405	PF03668	CQ11_RS00405
CQ11_RS00410	PF01933	Uncharacterised protein family UPF0052
CQ11_RS00415	PF02650	WhiA C-terminal HTH domain
CQ11_RS00415	PF10298	WhiA N-terminal LAGLIDADG-like domain
CQ11_RS00415	PF14527	WhiA LAGLIDADG-like domain
CQ11_RS00420	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CQ11_RS00420	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CQ11_RS00425	PF00162	Phosphoglycerate kinase
CQ11_RS00430	PF00121	Triosephosphate isomerase
CQ11_RS00435	PF03840	Preprotein translocase SecG subunit
CQ11_RS00440	PF10128	CQ11_RS00440
CQ11_RS00445	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
CQ11_RS00445	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
CQ11_RS00450	PF00923	Transaldolase
CQ11_RS00455	PF00456	Transketolase, thiamine diphosphate binding domain
CQ11_RS00455	PF02779	Transketolase, pyrimidine binding domain
CQ11_RS00455	PF02780	Transketolase, C-terminal domain
CQ11_RS00460	PF00589	Phage integrase family
CQ11_RS00460	PF02899	Phage integrase, N-terminal SAM-like domain
CQ11_RS00465	PF13614	AAA domain
CQ11_RS00470	PF02616	ScpA/B protein
CQ11_RS00475	PF04079	Putative transcriptional regulators (Ypuh-like)
CQ11_RS00480	PF00849	RNA pseudouridylate synthase
CQ11_RS00480	PF01479	S4 domain
CQ11_RS00485	PF02153	Prephenate dehydrogenase
CQ11_RS00490	PF01926	50S ribosome-binding GTPase
CQ11_RS00490	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CQ11_RS00495	PF00365	Phosphofructokinase
CQ11_RS00505	PF01433	Peptidase family M1
CQ11_RS00505	PF11838	ERAP1-like C-terminal domain
CQ11_RS00510	PF00498	FHA domain
CQ11_RS00515	PF13411	MerR HTH family regulatory protein
CQ11_RS00520	PF13411	MerR HTH family regulatory protein
CQ11_RS00530	PF13397	Domain of unknown function (DUF4109)
CQ11_RS00535	PF00535	Glycosyl transferase family 2
CQ11_RS00540	PF00795	Carbon-nitrogen hydrolase
CQ11_RS00545	PF00270	DEAD/DEAH box helicase
CQ11_RS00545	PF00271	Helicase conserved C-terminal domain
CQ11_RS00545	PF08148	DSHCT (NUC185) domain
CQ11_RS00560	PF13280	CQ11_RS00560
CQ11_RS00565	PF13280	CQ11_RS00565
CQ11_RS00570	PF12982	CQ11_RS00570
CQ11_RS00575	PF01634	ATP phosphoribosyltransferase
CQ11_RS00575	PF08029	HisG, C-terminal domain
CQ11_RS00580	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CQ11_RS00585	PF09084	NMT1/THI5 like
CQ11_RS00590	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS00595	PF00834	Ribulose-phosphate 3 epimerase family
CQ11_RS00600	PF01029	NusB family
CQ11_RS00600	PF01189	NOL1/NOP2/sun family
CQ11_RS00605	PF00551	Formyl transferase
CQ11_RS00605	PF02911	Formyl transferase, C-terminal domain
CQ11_RS00615	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CQ11_RS00615	PF02772	S-adenosylmethionine synthetase, central domain
CQ11_RS00615	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CQ11_RS00620	PF02441	Flavoprotein
CQ11_RS00620	PF04127	DNA / pantothenate metabolism flavoprotein
CQ11_RS00625	PF01192	RNA polymerase Rpb6
CQ11_RS00630	PF00625	Guanylate kinase
CQ11_RS00640	PF02142	MGS-like domain
CQ11_RS00640	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CQ11_RS00640	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CQ11_RS00645	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CQ11_RS00650	PF01029	NusB family
CQ11_RS00655	PF01132	Elongation factor P (EF-P) OB domain
CQ11_RS00655	PF08207	Elongation factor P (EF-P) KOW-like domain
CQ11_RS00655	PF09285	Elongation factor P, C-terminal
CQ11_RS00660	PF00122	E1-E2 ATPase
CQ11_RS00660	PF00702	haloacid dehalogenase-like hydrolase
CQ11_RS00665	PF01202	Shikimate kinase
CQ11_RS00670	PF01202	Shikimate kinase
CQ11_RS00670	PF01761	3-dehydroquinate synthase
CQ11_RS00675	PF01264	Chorismate synthase
CQ11_RS00690	PF02618	YceG-like family
CQ11_RS00695	PF03652	Uncharacterised protein family (UPF0081)
CQ11_RS00700	PF01411	tRNA synthetases class II (A)
CQ11_RS00700	PF02272	DHHA1 domain
CQ11_RS00700	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CQ11_RS00705	PF06103	CQ11_RS00705
CQ11_RS00710	PF00163	Ribosomal protein S4/S9 N-terminal domain
CQ11_RS00710	PF01479	S4 domain
CQ11_RS00715	PF00004	ATPase family associated with various cellular activities (AAA)
CQ11_RS00715	PF12002	MgsA AAA+ ATPase C terminal
CQ11_RS00715	PF16193	CQ11_RS00715
CQ11_RS00720	PF03176	MMPL family
CQ11_RS00735	PF00152	tRNA synthetases class II (D, K and N)
CQ11_RS00735	PF01336	OB-fold nucleic acid binding domain
CQ11_RS00735	PF02938	GAD domain
CQ11_RS00740	PF07690	Major Facilitator Superfamily
CQ11_RS00745	PF00270	DEAD/DEAH box helicase
CQ11_RS00745	PF00271	Helicase conserved C-terminal domain
CQ11_RS00745	PF03880	DbpA RNA binding domain
CQ11_RS00755	PF01926	50S ribosome-binding GTPase
CQ11_RS00760	PF00350	Dynamin family
CQ11_RS00765	PF03129	Anticodon binding domain
CQ11_RS00765	PF13393	Histidyl-tRNA synthetase
CQ11_RS00770	PF00753	Metallo-beta-lactamase superfamily
CQ11_RS00775	PF03993	CQ11_RS00775
CQ11_RS00785	PF02824	TGS domain
CQ11_RS00785	PF04607	Region found in RelA / SpoT proteins
CQ11_RS00785	PF13291	ACT domain
CQ11_RS00785	PF13328	HD domain
CQ11_RS00790	PF00156	Phosphoribosyl transferase domain
CQ11_RS00795	PF02355	Protein export membrane protein
CQ11_RS00795	PF07549	SecD/SecF GG Motif
CQ11_RS00800	PF03176	MMPL family
CQ11_RS00810	PF05491	Holliday junction DNA helicase ruvB C-terminus
CQ11_RS00810	PF05496	Holliday junction DNA helicase ruvB N-terminus
CQ11_RS00815	PF01330	RuvA N terminal domain
CQ11_RS00815	PF07499	RuvA, C-terminal domain
CQ11_RS00815	PF14520	Helix-hairpin-helix domain
CQ11_RS00820	PF02075	Crossover junction endodeoxyribonuclease RuvC
CQ11_RS00825	PF01709	Transcriptional regulator
CQ11_RS00830	PF00293	NUDIX domain
CQ11_RS00840	PF00534	Glycosyl transferases group 1
CQ11_RS00840	PF13439	Glycosyltransferase Family 4
CQ11_RS00845	PF03279	CQ11_RS00845
CQ11_RS00850	PF01066	CDP-alcohol phosphatidyltransferase
CQ11_RS00855	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CQ11_RS00855	PF03129	Anticodon binding domain
CQ11_RS00855	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CQ11_RS00860	PF03313	CQ11_RS00860
CQ11_RS00860	PF03315	Serine dehydratase beta chain
CQ11_RS00865	PF00072	Response regulator receiver domain
CQ11_RS00865	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS00905	PF00128	Alpha amylase, catalytic domain
CQ11_RS00905	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CQ11_RS00910	PF00128	Alpha amylase, catalytic domain
CQ11_RS00915	PF00128	Alpha amylase, catalytic domain
CQ11_RS00920	PF11452	CQ11_RS00920
CQ11_RS00925	PF00570	HRDC domain
CQ11_RS00925	PF01612	3'-5' exonuclease
CQ11_RS00930	PF02779	Transketolase, pyrimidine binding domain
CQ11_RS00930	PF02780	Transketolase, C-terminal domain
CQ11_RS00930	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CQ11_RS00940	PF00330	Aconitase family (aconitate hydratase)
CQ11_RS00940	PF00694	Aconitase C-terminal domain
CQ11_RS00945	PF05958	tRNA (Uracil-5-)-methyltransferase
CQ11_RS00955	PF02080	TrkA-C domain
CQ11_RS00955	PF02254	TrkA-N domain
CQ11_RS00960	PF02080	TrkA-C domain
CQ11_RS00960	PF02254	TrkA-N domain
CQ11_RS00965	PF11361	CQ11_RS00965
CQ11_RS00975	PF12502	CQ11_RS00975
CQ11_RS00980	PF13834	CQ11_RS00980
CQ11_RS00985	PF11268	CQ11_RS00985
CQ11_RS00990	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
CQ11_RS01000	PF00521	DNA gyrase/topoisomerase IV, subunit A
CQ11_RS01000	PF03989	DNA gyrase C-terminal domain, beta-propeller
CQ11_RS01005	PF00583	Acetyltransferase (GNAT) family
CQ11_RS01015	PF00204	DNA gyrase B
CQ11_RS01015	PF00986	DNA gyrase B subunit, carboxyl terminus
CQ11_RS01015	PF01751	Toprim domain
CQ11_RS01015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS01025	PF00929	Exonuclease
CQ11_RS01030	PF00140	Sigma-70 factor, region 1
CQ11_RS01030	PF04539	Sigma-70 region 3
CQ11_RS01030	PF04542	Sigma-70 region 2
CQ11_RS01030	PF04545	Sigma-70, region 4
CQ11_RS01035	PF00582	Universal stress protein family
CQ11_RS01040	PF13830	CQ11_RS01040
CQ11_RS01045	PF00348	Polyprenyl synthetase
CQ11_RS01055	PF01464	Transglycosylase SLT domain
CQ11_RS01055	PF01476	LysM domain
CQ11_RS01060	PF00069	Protein kinase domain
CQ11_RS01060	PF03793	PASTA domain
CQ11_RS01065	PF01474	Class-II DAHP synthetase family
CQ11_RS01070	PF00365	Phosphofructokinase
CQ11_RS01080	PF00929	Exonuclease
CQ11_RS01090	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CQ11_RS01090	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CQ11_RS01095	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CQ11_RS01100	PF01521	Iron-sulphur cluster biosynthesis
CQ11_RS01110	PF01546	Peptidase family M20/M25/M40
CQ11_RS01110	PF07687	Peptidase dimerisation domain
CQ11_RS01115	PF11241	CQ11_RS01115
CQ11_RS01125	PF00883	Cytosol aminopeptidase family, catalytic domain
CQ11_RS01125	PF02789	Cytosol aminopeptidase family, N-terminal domain
CQ11_RS01135	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CQ11_RS01135	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS01140	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CQ11_RS01140	PF00364	Biotin-requiring enzyme
CQ11_RS01140	PF02817	e3 binding domain
CQ11_RS01150	PF07690	Major Facilitator Superfamily
CQ11_RS01155	PF13829	CQ11_RS01155
CQ11_RS01160	PF00120	Glutamine synthetase, catalytic domain
CQ11_RS01160	PF03951	Glutamine synthetase, beta-Grasp domain
CQ11_RS01165	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS01170	PF03710	Glutamate-ammonia ligase adenylyltransferase
CQ11_RS01170	PF08335	GlnD PII-uridylyltransferase
CQ11_RS01175	PF00120	Glutamine synthetase, catalytic domain
CQ11_RS01175	PF03951	Glutamine synthetase, beta-Grasp domain
CQ11_RS01185	PF00557	Metallopeptidase family M24
CQ11_RS01190	PF00480	ROK family
CQ11_RS01195	PF03883	CQ11_RS01195
CQ11_RS01205	PF01784	NIF3 (NGG1p interacting factor 3)
CQ11_RS01210	PF02537	CQ11_RS01210
CQ11_RS01215	PF02537	CQ11_RS01215
CQ11_RS01240	PF11253	CQ11_RS01240
CQ11_RS01245	PF00456	Transketolase, thiamine diphosphate binding domain
CQ11_RS01250	PF00005	ABC transporter
CQ11_RS01250	PF00664	ABC transporter transmembrane region
CQ11_RS01255	PF00005	ABC transporter
CQ11_RS01255	PF00664	ABC transporter transmembrane region
CQ11_RS01260	PF13419	Haloacid dehalogenase-like hydrolase
CQ11_RS01265	PF01300	Telomere recombination
CQ11_RS01280	PF11343	CQ11_RS01280
CQ11_RS01285	PF01370	NAD dependent epimerase/dehydratase family
CQ11_RS01285	PF08338	Domain of unknown function (DUF1731)
CQ11_RS01290	PF01327	Polypeptide deformylase
CQ11_RS01295	PF00589	Phage integrase family
CQ11_RS01355	PF04586	CQ11_RS01355
CQ11_RS01360	PF04860	Phage portal protein
CQ11_RS01375	PF01844	HNH endonuclease
CQ11_RS01430	PF00005	ABC transporter
CQ11_RS01435	PF01032	FecCD transport family
CQ11_RS01440	PF01497	Periplasmic binding protein
CQ11_RS01460	PF02613	Nitrate reductase delta subunit
CQ11_RS01470	PF02416	mttA/Hcf106 family
CQ11_RS01475	PF00902	Sec-independent protein translocase protein (TatC)
CQ11_RS01485	PF01807	CHC2 zinc finger
CQ11_RS01485	PF08275	DNA primase catalytic core, N-terminal domain
CQ11_RS01485	PF08278	DNA primase DnaG DnaB-binding
CQ11_RS01485	PF10410	DnaB-helicase binding domain of primase
CQ11_RS01485	PF13662	Toprim domain
CQ11_RS01490	PF01966	HD domain
CQ11_RS01490	PF13286	Phosphohydrolase-associated domain
CQ11_RS01500	PF01207	Dihydrouridine synthase (Dus)
CQ11_RS01505	PF07907	CQ11_RS01505
CQ11_RS01510	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CQ11_RS01510	PF03129	Anticodon binding domain
CQ11_RS01515	PF01297	Periplasmic solute binding protein family
CQ11_RS01520	PF00005	ABC transporter
CQ11_RS01525	PF00950	CQ11_RS01525
CQ11_RS01530	PF01475	Ferric uptake regulator family
CQ11_RS01535	PF09335	CQ11_RS01535
CQ11_RS01540	PF13275	S4 domain
CQ11_RS01545	PF01336	OB-fold nucleic acid binding domain
CQ11_RS01545	PF02811	PHP domain
CQ11_RS01545	PF07733	Bacterial DNA polymerase III alpha subunit
CQ11_RS01545	PF14579	Helix-hairpin-helix motif
CQ11_RS01550	PF13673	Acetyltransferase (GNAT) domain
CQ11_RS01555	PF00849	RNA pseudouridylate synthase
CQ11_RS01560	PF01252	CQ11_RS01560
CQ11_RS01565	PF05103	DivIVA protein
CQ11_RS01570	PF02325	CQ11_RS01570
CQ11_RS01575	PF04472	Protein of unknown function (DUF552)
CQ11_RS01580	PF02578	Multi-copper polyphenol oxidoreductase laccase
CQ11_RS01585	PF00091	Tubulin/FtsZ family, GTPase domain
CQ11_RS01585	PF12327	FtsZ family, C-terminal domain
CQ11_RS01590	PF03799	Cell division protein FtsQ
CQ11_RS01590	PF08478	POTRA domain, FtsQ-type
CQ11_RS01595	PF01225	Mur ligase family, catalytic domain
CQ11_RS01595	PF02875	Mur ligase family, glutamate ligase domain
CQ11_RS01595	PF08245	Mur ligase middle domain
CQ11_RS01600	PF03033	Glycosyltransferase family 28 N-terminal domain
CQ11_RS01600	PF04101	Glycosyltransferase family 28 C-terminal domain
CQ11_RS01605	PF01098	CQ11_RS01605
CQ11_RS01610	PF02875	Mur ligase family, glutamate ligase domain
CQ11_RS01610	PF08245	Mur ligase middle domain
CQ11_RS01615	PF00953	Glycosyl transferase family 4
CQ11_RS01615	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
CQ11_RS01620	PF01225	Mur ligase family, catalytic domain
CQ11_RS01620	PF02875	Mur ligase family, glutamate ligase domain
CQ11_RS01620	PF08245	Mur ligase middle domain
CQ11_RS01625	PF01225	Mur ligase family, catalytic domain
CQ11_RS01625	PF02875	Mur ligase family, glutamate ligase domain
CQ11_RS01625	PF08245	Mur ligase middle domain
CQ11_RS01630	PF00905	Penicillin binding protein transpeptidase domain
CQ11_RS01630	PF03717	Penicillin-binding Protein dimerisation domain
CQ11_RS01640	PF01795	MraW methylase family
CQ11_RS01645	PF02381	MraZ protein
CQ11_RS01650	PF11239	CQ11_RS01650
CQ11_RS01655	PF00817	impB/mucB/samB family
CQ11_RS01655	PF11799	impB/mucB/samB family C-terminal domain
CQ11_RS01665	PF09754	PAC2 family
CQ11_RS01670	PF13245	Part of AAA domain
CQ11_RS01675	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CQ11_RS01675	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CQ11_RS01680	PF00501	AMP-binding enzyme
CQ11_RS01680	PF13193	AMP-binding enzyme C-terminal domain
CQ11_RS01685	PF03477	ATP cone domain
CQ11_RS01690	PF01476	LysM domain
CQ11_RS01695	PF00717	Peptidase S24-like
CQ11_RS01695	PF01726	LexA DNA binding domain
CQ11_RS01700	PF13307	Helicase C-terminal domain
CQ11_RS01705	PF01926	50S ribosome-binding GTPase
CQ11_RS01705	PF13167	CQ11_RS01705
CQ11_RS01705	PF16360	CQ11_RS01705
CQ11_RS01710	PF05175	Methyltransferase small domain
CQ11_RS01715	PF01715	IPP transferase
CQ11_RS01720	PF00919	Uncharacterized protein family UPF0004
CQ11_RS01720	PF04055	Radical SAM superfamily
CQ11_RS01725	PF02631	RecX family
CQ11_RS01730	PF00154	recA bacterial DNA recombination protein
CQ11_RS01735	PF11248	CQ11_RS01735
CQ11_RS01740	PF13560	Helix-turn-helix domain
CQ11_RS01745	PF02464	Competence-damaged protein
CQ11_RS01750	PF01066	CDP-alcohol phosphatidyltransferase
CQ11_RS01755	PF09587	Bacterial capsule synthesis protein PGA_cap
CQ11_RS01760	PF01580	FtsK/SpoIIIE family
CQ11_RS01760	PF09397	Ftsk gamma domain
CQ11_RS01765	PF00753	Metallo-beta-lactamase superfamily
CQ11_RS01765	PF07521	RNA-metabolising metallo-beta-lactamase
CQ11_RS01770	PF00701	Dihydrodipicolinate synthetase family
CQ11_RS01785	PF01113	Dihydrodipicolinate reductase, N-terminus
CQ11_RS01785	PF05173	Dihydrodipicolinate reductase, C-terminus
CQ11_RS01790	PF00675	Insulinase (Peptidase family M16)
CQ11_RS01790	PF05193	Peptidase M16 inactive domain
CQ11_RS01800	PF00013	KH domain
CQ11_RS01800	PF00575	S1 RNA binding domain
CQ11_RS01800	PF01138	3' exoribonuclease family, domain 1
CQ11_RS01800	PF03725	3' exoribonuclease family, domain 2
CQ11_RS01800	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CQ11_RS01805	PF00312	Ribosomal protein S15
CQ11_RS01815	PF00005	ABC transporter
CQ11_RS01825	PF01687	Riboflavin kinase
CQ11_RS01825	PF06574	FAD synthetase
CQ11_RS01835	PF09972	CQ11_RS01835
CQ11_RS01840	PF04011	LemA family
CQ11_RS01845	PF00005	ABC transporter
CQ11_RS01850	PF13343	Bacterial extracellular solute-binding protein
CQ11_RS01855	PF07690	Major Facilitator Superfamily
CQ11_RS01860	PF00072	Response regulator receiver domain
CQ11_RS01860	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS01865	PF00512	His Kinase A (phospho-acceptor) domain
CQ11_RS01865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS01870	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CQ11_RS01870	PF16198	CQ11_RS01870
CQ11_RS01875	PF02033	Ribosome-binding factor A
CQ11_RS01880	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS01880	PF04760	Translation initiation factor IF-2, N-terminal region
CQ11_RS01880	PF11987	Translation-initiation factor 2
CQ11_RS01885	PF08529	NusA N-terminal domain
CQ11_RS01885	PF13184	NusA-like KH domain
CQ11_RS01890	PF02576	Uncharacterised BCR, YhbC family COG0779
CQ11_RS01900	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CQ11_RS01900	PF03129	Anticodon binding domain
CQ11_RS01900	PF04073	Aminoacyl-tRNA editing domain
CQ11_RS01905	PF00583	Acetyltransferase (GNAT) family
CQ11_RS01905	PF13312	CQ11_RS01905
CQ11_RS01910	PF04551	GcpE protein
CQ11_RS01915	PF02163	Peptidase family M50
CQ11_RS01920	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CQ11_RS01920	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
CQ11_RS01920	PF13288	DXP reductoisomerase C-terminal domain
CQ11_RS01930	PF04055	Radical SAM superfamily
CQ11_RS01935	PF01148	Cytidylyltransferase family
CQ11_RS01940	PF01765	Ribosome recycling factor
CQ11_RS01945	PF00696	Amino acid kinase family
CQ11_RS01950	PF01479	S4 domain
CQ11_RS01955	PF07690	Major Facilitator Superfamily
CQ11_RS01960	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
CQ11_RS01965	PF01494	FAD binding domain
CQ11_RS01970	PF00766	Electron transfer flavoprotein FAD-binding domain
CQ11_RS01970	PF01012	Electron transfer flavoprotein domain
CQ11_RS01975	PF01012	Electron transfer flavoprotein domain
CQ11_RS01980	PF00889	Elongation factor TS
CQ11_RS01985	PF00318	Ribosomal protein S2
CQ11_RS01990	PF03458	CQ11_RS01990
CQ11_RS01995	PF01551	Peptidase family M23
CQ11_RS02000	PF00589	Phage integrase family
CQ11_RS02000	PF02899	Phage integrase, N-terminal SAM-like domain
CQ11_RS02005	PF02481	DNA recombination-mediator protein A
CQ11_RS02010	PF01078	Magnesium chelatase, subunit ChlI
CQ11_RS02010	PF13335	CQ11_RS02010
CQ11_RS02010	PF13541	Subunit ChlI of Mg-chelatase
CQ11_RS02015	PF02021	Uncharacterised protein family UPF0102
CQ11_RS02020	PF10611	CQ11_RS02020
CQ11_RS02025	PF01351	Ribonuclease HII
CQ11_RS02030	PF00717	Peptidase S24-like
CQ11_RS02035	PF00571	CBS domain
CQ11_RS02035	PF01769	Divalent cation transporter
CQ11_RS02035	PF03448	MgtE intracellular N domain
CQ11_RS02040	PF01245	Ribosomal protein L19
CQ11_RS02045	PF00583	Acetyltransferase (GNAT) family
CQ11_RS02045	PF01746	tRNA (Guanine-1)-methyltransferase
CQ11_RS02050	PF01782	RimM N-terminal domain
CQ11_RS02055	PF13083	KH domain
CQ11_RS02060	PF00886	Ribosomal protein S16
CQ11_RS02065	PF01545	Cation efflux family
CQ11_RS02065	PF16916	CQ11_RS02065
CQ11_RS02070	PF12724	Flavodoxin domain
CQ11_RS02075	PF01979	Amidohydrolase family
CQ11_RS02080	PF00448	SRP54-type protein, GTPase domain
CQ11_RS02080	PF02881	SRP54-type protein, helical bundle domain
CQ11_RS02080	PF02978	Signal peptide binding domain
CQ11_RS02085	PF00448	SRP54-type protein, GTPase domain
CQ11_RS02085	PF02881	SRP54-type protein, helical bundle domain
CQ11_RS02090	PF01289	Thiol-activated cytolysin
CQ11_RS02100	PF02463	RecF/RecN/SMC N terminal domain
CQ11_RS02100	PF06470	SMC proteins Flexible Hinge Domain
CQ11_RS02105	PF00334	Nucleoside diphosphate kinase
CQ11_RS02110	PF02875	Mur ligase family, glutamate ligase domain
CQ11_RS02110	PF08245	Mur ligase middle domain
CQ11_RS02115	PF00133	tRNA synthetases class I (I, L, M and V)
CQ11_RS02115	PF08264	Anticodon-binding domain of tRNA
CQ11_RS02130	PF03807	NADP oxidoreductase coenzyme F420-dependent
CQ11_RS02130	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CQ11_RS02140	PF00133	tRNA synthetases class I (I, L, M and V)
CQ11_RS02140	PF08264	Anticodon-binding domain of tRNA
CQ11_RS02145	PF00501	AMP-binding enzyme
CQ11_RS02150	PF01817	Chorismate mutase type II
CQ11_RS02155	PF06689	ClpX C4-type zinc finger
CQ11_RS02155	PF07724	AAA domain (Cdc48 subfamily)
CQ11_RS02155	PF10431	C-terminal, D2-small domain, of ClpB protein
CQ11_RS02160	PF00574	Clp protease
CQ11_RS02165	PF00574	Clp protease
CQ11_RS02170	PF05697	Bacterial trigger factor protein (TF)
CQ11_RS02170	PF05698	Bacterial trigger factor protein (TF) C-terminus
CQ11_RS02175	PF00248	Aldo/keto reductase family
CQ11_RS02185	PF00933	Glycosyl hydrolase family 3 N terminal domain
CQ11_RS02190	PF13347	MFS/sugar transport protein
CQ11_RS02195	PF00703	Glycosyl hydrolases family 2
CQ11_RS02195	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CQ11_RS02195	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CQ11_RS02200	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS02200	PF13377	Periplasmic binding protein-like domain
CQ11_RS02210	PF04221	RelB antitoxin
CQ11_RS02230	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CQ11_RS02230	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS02240	PF01783	Ribosomal L32p protein family
CQ11_RS02245	PF01205	Uncharacterized protein family UPF0029
CQ11_RS02250	PF00291	Pyridoxal-phosphate dependent enzyme
CQ11_RS02255	PF00132	Bacterial transferase hexapeptide (six repeats)
CQ11_RS02260	PF02502	Ribose/Galactose Isomerase
CQ11_RS02265	PF01431	Peptidase family M13
CQ11_RS02265	PF05649	Peptidase family M13
CQ11_RS02270	PF05661	CQ11_RS02270
CQ11_RS02275	PF01433	Peptidase family M1
CQ11_RS02275	PF11838	ERAP1-like C-terminal domain
CQ11_RS02280	PF03352	Methyladenine glycosylase
CQ11_RS02285	PF00367	phosphotransferase system, EIIB
CQ11_RS02290	PF02446	4-alpha-glucanotransferase
CQ11_RS02295	PF13622	Thioesterase-like superfamily
CQ11_RS02300	PF00005	ABC transporter
CQ11_RS02300	PF12848	ABC transporter
CQ11_RS02305	PF00436	Single-strand binding protein family
CQ11_RS02310	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS02315	PF00350	Dynamin family
CQ11_RS02325	PF00929	Exonuclease
CQ11_RS02345	PF00535	Glycosyl transferase family 2
CQ11_RS02355	PF00535	Glycosyl transferase family 2
CQ11_RS02365	PF09913	CQ11_RS02365
CQ11_RS02370	PF00535	Glycosyl transferase family 2
CQ11_RS02375	PF10066	CQ11_RS02375
CQ11_RS02385	PF00535	Glycosyl transferase family 2
CQ11_RS02390	PF04991	CQ11_RS02390
CQ11_RS02395	PF01636	Phosphotransferase enzyme family
CQ11_RS02395	PF12804	MobA-like NTP transferase domain
CQ11_RS02400	PF00534	Glycosyl transferases group 1
CQ11_RS02400	PF13439	Glycosyltransferase Family 4
CQ11_RS02410	PF00270	DEAD/DEAH box helicase
CQ11_RS02410	PF00271	Helicase conserved C-terminal domain
CQ11_RS02410	PF12029	CQ11_RS02410
CQ11_RS02415	PF01168	Alanine racemase, N-terminal domain
CQ11_RS02420	PF04055	Radical SAM superfamily
CQ11_RS02420	PF13353	4Fe-4S single cluster domain
CQ11_RS02425	PF01228	Glycine radical
CQ11_RS02430	PF01228	Glycine radical
CQ11_RS02430	PF02901	Pyruvate formate lyase
CQ11_RS02435	PF01063	Aminotransferase class IV
CQ11_RS02455	PF00206	Lyase
CQ11_RS02455	PF10415	Fumarase C C-terminus
CQ11_RS02460	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CQ11_RS02460	PF07991	Acetohydroxy acid isomeroreductase, catalytic domain
CQ11_RS02465	PF10369	Small subunit of acetolactate synthase
CQ11_RS02465	PF13710	ACT domain
CQ11_RS02470	PF00205	Thiamine pyrophosphate enzyme, central domain
CQ11_RS02470	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CQ11_RS02470	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CQ11_RS02475	PF02080	TrkA-C domain
CQ11_RS02475	PF06826	CQ11_RS02475
CQ11_RS02480	PF00920	Dehydratase family
CQ11_RS02485	PF08241	Methyltransferase domain
CQ11_RS02505	PF00950	CQ11_RS02505
CQ11_RS02510	PF00950	CQ11_RS02510
CQ11_RS02515	PF00005	ABC transporter
CQ11_RS02520	PF01297	Periplasmic solute binding protein family
CQ11_RS02525	PF00579	tRNA synthetases class I (W and Y)
CQ11_RS02525	PF01479	S4 domain
CQ11_RS02530	PF00005	ABC transporter
CQ11_RS02535	PF01061	CQ11_RS02535
CQ11_RS02540	PF01381	Helix-turn-helix
CQ11_RS02550	PF16363	CQ11_RS02550
CQ11_RS02555	PF01316	Arginine repressor, DNA binding domain
CQ11_RS02555	PF02863	Arginine repressor, C-terminal domain
CQ11_RS02560	PF00202	Aminotransferase class-III
CQ11_RS02565	PF04198	Putative sugar-binding domain
CQ11_RS02570	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CQ11_RS02570	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CQ11_RS02575	PF04073	Aminoacyl-tRNA editing domain
CQ11_RS02580	PF01588	Putative tRNA binding domain
CQ11_RS02580	PF03147	Ferredoxin-fold anticodon binding domain
CQ11_RS02580	PF03483	B3/4 domain
CQ11_RS02580	PF03484	tRNA synthetase B5 domain
CQ11_RS02585	PF01409	tRNA synthetases class II core domain (F)
CQ11_RS02585	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CQ11_RS02590	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CQ11_RS02595	PF00588	SpoU rRNA Methylase family
CQ11_RS02600	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
CQ11_RS02605	PF00453	Ribosomal protein L20
CQ11_RS02610	PF01632	Ribosomal protein L35
CQ11_RS02615	PF00707	Translation initiation factor IF-3, C-terminal domain
CQ11_RS02615	PF05198	Translation initiation factor IF-3, N-terminal domain
CQ11_RS02620	PF07179	CQ11_RS02620
CQ11_RS02625	PF00977	Histidine biosynthesis protein
CQ11_RS02630	PF00117	Glutamine amidotransferase class-I
CQ11_RS02640	PF00475	Imidazoleglycerol-phosphate dehydratase
CQ11_RS02645	PF00155	Aminotransferase class I and II
CQ11_RS02650	PF00815	Histidinol dehydrogenase
CQ11_RS02655	PF01255	Putative undecaprenyl diphosphate synthase
CQ11_RS02660	PF02565	Recombination protein O C terminal
CQ11_RS02660	PF11967	Recombination protein O N terminal
CQ11_RS02665	PF00682	HMGL-like
CQ11_RS02665	PF08502	LeuA allosteric (dimerisation) domain
CQ11_RS02680	PF13672	Protein phosphatase 2C
CQ11_RS02685	PF08840	BAAT / Acyl-CoA thioester hydrolase C terminal
CQ11_RS02690	PF01926	50S ribosome-binding GTPase
CQ11_RS02690	PF07650	KH domain
CQ11_RS02695	PF00571	CBS domain
CQ11_RS02695	PF03471	Transporter associated domain
CQ11_RS02700	PF02130	Uncharacterized protein family UPF0054
CQ11_RS02705	PF02562	PhoH-like protein
CQ11_RS02710	PF04452	RNA methyltransferase
CQ11_RS02715	PF00226	DnaJ domain
CQ11_RS02715	PF00684	DnaJ central domain
CQ11_RS02715	PF01556	DnaJ C terminal domain
CQ11_RS02720	PF01628	HrcA protein C terminal domain
CQ11_RS02720	PF08220	DeoR-like helix-turn-helix domain
CQ11_RS02725	PF11296	CQ11_RS02725
CQ11_RS02735	PF04055	Radical SAM superfamily
CQ11_RS02740	PF02390	Putative methyltransferase
CQ11_RS02745	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS02745	PF00679	Elongation factor G C-terminus
CQ11_RS02745	PF06421	GTP-binding protein LepA C-terminus
CQ11_RS02755	PF03703	CQ11_RS02755
CQ11_RS02760	PF02452	PemK-like protein
CQ11_RS02765	PF05532	CsbD-like
CQ11_RS02770	PF01649	Ribosomal protein S20
CQ11_RS02775	PF02233	NAD(P) transhydrogenase beta subunit
CQ11_RS02780	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
CQ11_RS02780	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
CQ11_RS02780	PF12769	Domain of unknown function (DUF3814)
CQ11_RS02790	PF00753	Metallo-beta-lactamase superfamily
CQ11_RS02790	PF03772	CQ11_RS02790
CQ11_RS02790	PF13567	CQ11_RS02790
CQ11_RS02800	PF05872	CQ11_RS02800
CQ11_RS02805	PF02525	Flavodoxin-like fold
CQ11_RS02810	PF01263	Aldose 1-epimerase
CQ11_RS02815	PF08264	Anticodon-binding domain of tRNA
CQ11_RS02815	PF09334	tRNA synthetases class I (M)
CQ11_RS02815	PF13603	Leucyl-tRNA synthetase, Domain 2
CQ11_RS02820	PF01230	HIT domain
CQ11_RS02825	PF07884	Vitamin K epoxide reductase family
CQ11_RS02830	PF03332	Eukaryotic phosphomannomutase
CQ11_RS02835	PF01594	CQ11_RS02835
CQ11_RS02840	PF01048	Phosphorylase superfamily
CQ11_RS02845	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CQ11_RS02845	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CQ11_RS02845	PF04023	FeoA domain
CQ11_RS02850	PF00265	Thymidine kinase
CQ11_RS02860	PF12840	Helix-turn-helix domain
CQ11_RS02870	PF01297	Periplasmic solute binding protein family
CQ11_RS02880	PF00005	ABC transporter
CQ11_RS02885	PF00950	CQ11_RS02885
CQ11_RS02890	PF00294	pfkB family carbohydrate kinase
CQ11_RS02895	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS02900	PF01569	PAP2 superfamily
CQ11_RS02905	PF06940	CQ11_RS02905
CQ11_RS02910	PF01381	Helix-turn-helix
CQ11_RS02925	PF00324	Amino acid permease
CQ11_RS02930	PF05681	CQ11_RS02930
CQ11_RS02930	PF05683	Fumarase C-terminus
CQ11_RS02935	PF00005	ABC transporter
CQ11_RS02940	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS02945	PF03180	NLPA lipoprotein
CQ11_RS02950	PF00324	Amino acid permease
CQ11_RS02955	PF05437	CQ11_RS02955
CQ11_RS02960	PF03591	CQ11_RS02960
CQ11_RS02970	PF07690	Major Facilitator Superfamily
CQ11_RS02975	PF01156	Inosine-uridine preferring nucleoside hydrolase
CQ11_RS02980	PF01136	CQ11_RS02980
CQ11_RS02980	PF16325	CQ11_RS02980
CQ11_RS02990	PF01174	SNO glutamine amidotransferase family
CQ11_RS02995	PF01680	SOR/SNZ family
CQ11_RS03000	PF00155	Aminotransferase class I and II
CQ11_RS03000	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS03010	PF01910	Domain of unknown function DUF77
CQ11_RS03020	PF04203	Sortase family
CQ11_RS03025	PF05738	Cna protein B-type domain
CQ11_RS03025	PF16569	CQ11_RS03025
CQ11_RS03040	PF01522	Polysaccharide deacetylase
CQ11_RS03040	PF16403	CQ11_RS03040
CQ11_RS03045	PF00291	Pyridoxal-phosphate dependent enzyme
CQ11_RS03050	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS03050	PF13377	Periplasmic binding protein-like domain
CQ11_RS03055	PF05025	RbsD / FucU transport protein family
CQ11_RS03060	PF07690	Major Facilitator Superfamily
CQ11_RS03065	PF00596	Class II Aldolase and Adducin N-terminal domain
CQ11_RS03070	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS03070	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS03075	PF02952	L-fucose isomerase, C-terminal domain
CQ11_RS03075	PF07881	L-fucose isomerase, first N-terminal domain
CQ11_RS03075	PF07882	L-fucose isomerase, second N-terminal domain
CQ11_RS03100	PF00239	Resolvase, N terminal domain
CQ11_RS03100	PF07508	Recombinase
CQ11_RS03100	PF13408	Recombinase zinc beta ribbon domain
CQ11_RS03120	PF01510	N-acetylmuramoyl-L-alanine amidase
CQ11_RS03120	PF08230	CQ11_RS03120
CQ11_RS03125	PF05105	CQ11_RS03125
CQ11_RS03150	PF06605	Prophage endopeptidase tail
CQ11_RS03195	PF05521	Phage head-tail joining protein
CQ11_RS03200	PF05135	Phage gp6-like head-tail connector protein
CQ11_RS03205	PF05065	Phage capsid family
CQ11_RS03210	PF00574	Clp protease
CQ11_RS03215	PF04860	Phage portal protein
CQ11_RS03250	PF01555	DNA methylase
CQ11_RS03250	PF02195	ParB-like nuclease domain
CQ11_RS03255	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CQ11_RS03255	PF02772	S-adenosylmethionine synthetase, central domain
CQ11_RS03255	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CQ11_RS03280	PF01844	HNH endonuclease
CQ11_RS03290	PF00176	SNF2 family N-terminal domain
CQ11_RS03295	PF08774	VRR-NUC domain
CQ11_RS03300	PF08706	CQ11_RS03300
CQ11_RS03300	PF08708	Primase C terminal 1 (PriCT-1)
CQ11_RS03310	PF02498	CQ11_RS03310
CQ11_RS03310	PF03374	CQ11_RS03310
CQ11_RS03325	PF00476	DNA polymerase family A
CQ11_RS03335	PF10991	Protein of unknown function (DUF2815)
CQ11_RS03355	PF08281	Sigma-70, region 4
CQ11_RS03370	PF12728	Helix-turn-helix domain
CQ11_RS03375	PF13166	CQ11_RS03375
CQ11_RS03380	PF13443	Cro/C1-type HTH DNA-binding domain
CQ11_RS03385	PF00271	Helicase conserved C-terminal domain
CQ11_RS03385	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
CQ11_RS03385	PF04851	Type III restriction enzyme, res subunit
CQ11_RS03385	PF08463	CQ11_RS03385
CQ11_RS03390	PF02384	N-6 DNA Methylase
CQ11_RS03390	PF12161	HsdM N-terminal domain
CQ11_RS03400	PF00872	CQ11_RS03400
CQ11_RS03410	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS03415	PF02410	Oligomerisation domain
CQ11_RS03425	PF01467	Cytidylyltransferase
CQ11_RS03430	PF00085	Thioredoxin
CQ11_RS03440	PF01018	GTP1/OBG
CQ11_RS03440	PF01926	50S ribosome-binding GTPase
CQ11_RS03440	PF09269	Domain of unknown function (DUF1967)
CQ11_RS03445	PF01016	Ribosomal L27 protein
CQ11_RS03450	PF00829	Ribosomal prokaryotic L21 protein
CQ11_RS03455	PF00575	S1 RNA binding domain
CQ11_RS03455	PF10150	Ribonuclease E/G family
CQ11_RS03460	PF01654	CQ11_RS03460
CQ11_RS03465	PF02322	CQ11_RS03465
CQ11_RS03470	PF00005	ABC transporter
CQ11_RS03470	PF00664	ABC transporter transmembrane region
CQ11_RS03475	PF00005	ABC transporter
CQ11_RS03475	PF00664	ABC transporter transmembrane region
CQ11_RS03480	PF01590	GAF domain
CQ11_RS03480	PF07730	Histidine kinase
CQ11_RS03480	PF13185	GAF domain
CQ11_RS03485	PF00005	ABC transporter
CQ11_RS03485	PF00664	ABC transporter transmembrane region
CQ11_RS03490	PF00005	ABC transporter
CQ11_RS03490	PF00664	ABC transporter transmembrane region
CQ11_RS03495	PF00578	AhpC/TSA family
CQ11_RS03500	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS03505	PF00072	Response regulator receiver domain
CQ11_RS03505	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS03510	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
CQ11_RS03510	PF06827	Zinc finger found in FPG and IleRS
CQ11_RS03510	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
CQ11_RS03515	PF00035	Double-stranded RNA binding motif
CQ11_RS03515	PF14622	Ribonuclease-III-like
CQ11_RS03520	PF02620	CQ11_RS03520
CQ11_RS03530	PF01467	Cytidylyltransferase
CQ11_RS03535	PF03602	Conserved hypothetical protein 95
CQ11_RS03540	PF00270	DEAD/DEAH box helicase
CQ11_RS03540	PF00271	Helicase conserved C-terminal domain
CQ11_RS03540	PF17191	CQ11_RS03540
CQ11_RS03545	PF00830	Ribosomal L28 family
CQ11_RS03550	PF08282	haloacid dehalogenase-like hydrolase
CQ11_RS03555	PF00586	AIR synthase related protein, N-terminal domain
CQ11_RS03555	PF02769	AIR synthase related protein, C-terminal domain
CQ11_RS03560	PF03358	NADPH-dependent FMN reductase
CQ11_RS03565	PF01820	D-ala D-ala ligase N-terminus
CQ11_RS03565	PF07478	D-ala D-ala ligase C-terminus
CQ11_RS03570	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CQ11_RS03575	PF04239	Protein of unknown function (DUF421)
CQ11_RS03580	PF03577	CQ11_RS03580
CQ11_RS03585	PF01614	Bacterial transcriptional regulator
CQ11_RS03585	PF09339	IclR helix-turn-helix domain
CQ11_RS03590	PF00534	Glycosyl transferases group 1
CQ11_RS03595	PF02016	LD-carboxypeptidase
CQ11_RS03610	PF01432	Peptidase family M3
CQ11_RS03630	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS03635	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS03640	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS03645	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS03645	PF13377	Periplasmic binding protein-like domain
CQ11_RS03655	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CQ11_RS03660	PF00155	Aminotransferase class I and II
CQ11_RS03665	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CQ11_RS03665	PF10370	Domain of unknown function (DUF2437)
CQ11_RS03670	PF00501	AMP-binding enzyme
CQ11_RS03680	PF00578	AhpC/TSA family
CQ11_RS03690	PF16262	CQ11_RS03690
CQ11_RS03695	PF01725	Ham1 family
CQ11_RS03700	PF01138	3' exoribonuclease family, domain 1
CQ11_RS03700	PF03725	3' exoribonuclease family, domain 2
CQ11_RS03705	PF12706	Beta-lactamase superfamily domain
CQ11_RS03710	PF01177	Asp/Glu/Hydantoin racemase
CQ11_RS03715	PF09438	CQ11_RS03715
CQ11_RS03720	PF02617	ATP-dependent Clp protease adaptor protein ClpS
CQ11_RS03725	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
CQ11_RS03730	PF04851	Type III restriction enzyme, res subunit
CQ11_RS03735	PF11238	CQ11_RS03735
CQ11_RS03740	PF00216	Bacterial DNA-binding protein
CQ11_RS03745	PF02080	TrkA-C domain
CQ11_RS03745	PF06826	CQ11_RS03745
CQ11_RS03755	PF16264	CQ11_RS03755
CQ11_RS03760	PF02540	NAD synthase
CQ11_RS03770	PF00583	Acetyltransferase (GNAT) family
CQ11_RS03775	PF00082	Subtilase family
CQ11_RS03775	PF02225	PA domain
CQ11_RS03775	PF06280	Fn3-like domain (DUF1034)
CQ11_RS03780	PF14133	CQ11_RS03780
CQ11_RS03785	PF08241	Methyltransferase domain
CQ11_RS03800	PF12802	MarR family
CQ11_RS03815	PF01402	Ribbon-helix-helix protein, copG family
CQ11_RS03825	PF02016	LD-carboxypeptidase
CQ11_RS03830	PF13242	HAD-hyrolase-like
CQ11_RS03830	PF13344	Haloacid dehalogenase-like hydrolase
CQ11_RS03835	PF01668	SmpB protein
CQ11_RS03840	PF01551	Peptidase family M23
CQ11_RS03845	PF02687	CQ11_RS03845
CQ11_RS03850	PF00005	ABC transporter
CQ11_RS03855	PF00472	RF-1 domain
CQ11_RS03855	PF03462	PCRF domain
CQ11_RS03880	PF00482	Type II secretion system (T2SS), protein F
CQ11_RS03885	PF00482	Type II secretion system (T2SS), protein F
CQ11_RS03890	PF00437	Type II/IV secretion system protein
CQ11_RS03895	PF01636	Phosphotransferase enzyme family
CQ11_RS03900	PF00580	UvrD/REP helicase N-terminal domain
CQ11_RS03900	PF12705	PD-(D/E)XK nuclease superfamily
CQ11_RS03900	PF13361	UvrD-like helicase C-terminal domain
CQ11_RS03905	PF12705	PD-(D/E)XK nuclease superfamily
CQ11_RS03910	PF11305	CQ11_RS03910
CQ11_RS03915	PF00270	DEAD/DEAH box helicase
CQ11_RS03915	PF00271	Helicase conserved C-terminal domain
CQ11_RS03920	PF01914	CQ11_RS03920
CQ11_RS03925	PF02811	PHP domain
CQ11_RS03930	PF00557	Metallopeptidase family M24
CQ11_RS03930	PF05195	Aminopeptidase P, N-terminal domain
CQ11_RS03935	PF00571	CBS domain
CQ11_RS03935	PF03448	MgtE intracellular N domain
CQ11_RS03940	PF06210	CQ11_RS03940
CQ11_RS03945	PF01883	Domain of unknown function DUF59
CQ11_RS03945	PF10609	ParA/MinD ATPase like
CQ11_RS03950	PF01596	O-methyltransferase
CQ11_RS03955	PF03641	Possible lysine decarboxylase
CQ11_RS03960	PF01048	Phosphorylase superfamily
CQ11_RS03965	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CQ11_RS03965	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CQ11_RS03965	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CQ11_RS03965	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CQ11_RS03975	PF07690	Major Facilitator Superfamily
CQ11_RS03980	PF01791	DeoC/LacD family aldolase
CQ11_RS03990	PF00591	Glycosyl transferase family, a/b domain
CQ11_RS03990	PF02885	Glycosyl transferase family, helical bundle domain
CQ11_RS03990	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
CQ11_RS03995	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CQ11_RS04000	PF02653	CQ11_RS04000
CQ11_RS04005	PF02653	CQ11_RS04005
CQ11_RS04010	PF00005	ABC transporter
CQ11_RS04015	PF02608	Basic membrane protein
CQ11_RS04020	PF00483	Nucleotidyl transferase
CQ11_RS04025	PF03631	CQ11_RS04025
CQ11_RS04030	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS04035	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CQ11_RS04035	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CQ11_RS04040	PF00464	Serine hydroxymethyltransferase
CQ11_RS04045	PF00551	Formyl transferase
CQ11_RS04045	PF01842	ACT domain
CQ11_RS04050	PF02632	BioY family
CQ11_RS04055	PF01648	4'-phosphopantetheinyl transferase superfamily
CQ11_RS04060	PF00109	Beta-ketoacyl synthase, N-terminal domain
CQ11_RS04060	PF00698	Acyl transferase domain
CQ11_RS04060	PF01575	MaoC like domain
CQ11_RS04060	PF02801	Beta-ketoacyl synthase, C-terminal domain
CQ11_RS04060	PF08354	Domain of unknown function (DUF1729)
CQ11_RS04065	PF01039	Carboxyl transferase domain
CQ11_RS04070	PF00289	Carbamoyl-phosphate synthase L chain, N-terminal domain
CQ11_RS04070	PF00364	Biotin-requiring enzyme
CQ11_RS04070	PF02785	Biotin carboxylase C-terminal domain
CQ11_RS04070	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CQ11_RS04085	PF05187	Electron transfer flavoprotein-ubiquinone oxidoreductase
CQ11_RS04090	PF01494	FAD binding domain
CQ11_RS04095	PF00766	Electron transfer flavoprotein FAD-binding domain
CQ11_RS04100	PF01012	Electron transfer flavoprotein domain
CQ11_RS04105	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS04110	PF00753	Metallo-beta-lactamase superfamily
CQ11_RS04115	PF00083	Sugar (and other) transporter
CQ11_RS04120	PF01575	MaoC like domain
CQ11_RS04125	PF00501	AMP-binding enzyme
CQ11_RS04125	PF13193	AMP-binding enzyme C-terminal domain
CQ11_RS04130	PF02515	CoA-transferase family III
CQ11_RS04135	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
CQ11_RS04135	PF02770	Acyl-CoA dehydrogenase, middle domain
CQ11_RS04135	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
CQ11_RS04140	PF07859	alpha/beta hydrolase fold
CQ11_RS04145	PF07690	Major Facilitator Superfamily
CQ11_RS04160	PF00056	lactate/malate dehydrogenase, NAD binding domain
CQ11_RS04160	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CQ11_RS04165	PF00089	Trypsin
CQ11_RS04175	PF00342	Phosphoglucose isomerase
CQ11_RS04180	PF00365	Phosphofructokinase
CQ11_RS04190	PF01808	AICARFT/IMPCHase bienzyme
CQ11_RS04190	PF02142	MGS-like domain
CQ11_RS04200	PF14542	GCN5-related N-acetyl-transferase
CQ11_RS04205	PF00549	CoA-ligase
CQ11_RS04205	PF02629	CoA binding domain
CQ11_RS04210	PF00549	CoA-ligase
CQ11_RS04210	PF08442	ATP-grasp domain
CQ11_RS04215	PF01757	CQ11_RS04215
CQ11_RS04220	PF00580	UvrD/REP helicase N-terminal domain
CQ11_RS04220	PF13361	UvrD-like helicase C-terminal domain
CQ11_RS04230	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
CQ11_RS04245	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS04245	PF00679	Elongation factor G C-terminus
CQ11_RS04245	PF03764	Elongation factor G, domain IV
CQ11_RS04245	PF14492	Elongation Factor G, domain II
CQ11_RS04250	PF01076	Plasmid recombination enzyme
CQ11_RS04255	PF13481	AAA domain
CQ11_RS04265	PF00589	Phage integrase family
CQ11_RS04265	PF14657	CQ11_RS04265
CQ11_RS04265	PF14659	Phage integrase, N-terminal SAM-like domain
CQ11_RS04275	PF01381	Helix-turn-helix
CQ11_RS04280	PF00117	Glutamine amidotransferase class-I
CQ11_RS04280	PF00958	GMP synthase C terminal domain
CQ11_RS04280	PF02540	NAD synthase
CQ11_RS04285	PF00849	RNA pseudouridylate synthase
CQ11_RS04290	PF01515	Phosphate acetyl/butaryl transferase
CQ11_RS04295	PF00871	Acetokinase family
CQ11_RS04300	PF00583	Acetyltransferase (GNAT) family
CQ11_RS04305	PF02687	CQ11_RS04305
CQ11_RS04310	PF00005	ABC transporter
CQ11_RS04315	PF03551	Transcriptional regulator PadR-like family
CQ11_RS04320	PF00206	Lyase
CQ11_RS04320	PF10415	Fumarase C C-terminus
CQ11_RS04325	PF00478	IMP dehydrogenase / GMP reductase domain
CQ11_RS04330	PF00929	Exonuclease
CQ11_RS04335	PF00478	IMP dehydrogenase / GMP reductase domain
CQ11_RS04335	PF00571	CBS domain
CQ11_RS04340	PF02467	CQ11_RS04340
CQ11_RS04350	PF02769	AIR synthase related protein, C-terminal domain
CQ11_RS04350	PF13507	CobB/CobQ-like glutamine amidotransferase domain
CQ11_RS04355	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CQ11_RS04355	PF02843	Phosphoribosylglycinamide synthetase, C domain
CQ11_RS04355	PF02844	Phosphoribosylglycinamide synthetase, N domain
CQ11_RS04360	PF00551	Formyl transferase
CQ11_RS04365	PF00586	AIR synthase related protein, N-terminal domain
CQ11_RS04365	PF02769	AIR synthase related protein, C-terminal domain
CQ11_RS04370	PF00156	Phosphoribosyl transferase domain
CQ11_RS04370	PF13537	Glutamine amidotransferase domain
CQ11_RS04375	PF01259	SAICAR synthetase
CQ11_RS04380	PF00731	AIR carboxylase
CQ11_RS04390	PF00166	Chaperonin 10 Kd subunit
CQ11_RS04400	PF02535	CQ11_RS04400
CQ11_RS04405	PF00814	Glycoprotease family
CQ11_RS04410	PF00209	Sodium:neurotransmitter symporter family
CQ11_RS04415	PF13085	2Fe-2S iron-sulfur cluster binding domain
CQ11_RS04415	PF13183	4Fe-4S dicluster domain
CQ11_RS04420	PF00890	FAD binding domain
CQ11_RS04420	PF02910	Fumarate reductase flavoprotein C-term
CQ11_RS04430	PF00583	Acetyltransferase (GNAT) family
CQ11_RS04435	PF00814	Glycoprotease family
CQ11_RS04445	PF02367	Uncharacterised P-loop hydrolase UPF0079
CQ11_RS04450	PF00842	Alanine racemase, C-terminal domain
CQ11_RS04450	PF01168	Alanine racemase, N-terminal domain
CQ11_RS04455	PF01256	Carbohydrate kinase
CQ11_RS04455	PF03853	YjeF-related protein N-terminus
CQ11_RS04460	PF01380	SIS domain
CQ11_RS04460	PF13522	Glutamine amidotransferase domain
CQ11_RS04465	PF00485	Phosphoribulokinase / Uridine kinase family
CQ11_RS04470	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CQ11_RS04470	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CQ11_RS04470	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CQ11_RS04470	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CQ11_RS04475	PF00380	Ribosomal protein S9/S16
CQ11_RS04480	PF00572	Ribosomal protein L13
CQ11_RS04485	PF01887	S-adenosyl-l-methionine hydroxide adenosyltransferase
CQ11_RS04490	PF07155	ECF-type riboflavin transporter, S component
CQ11_RS04495	PF00005	ABC transporter
CQ11_RS04495	PF12558	CQ11_RS04495
CQ11_RS04500	PF02361	Cobalt transport protein
CQ11_RS04505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CQ11_RS04505	PF03466	LysR substrate binding domain
CQ11_RS04515	PF01416	tRNA pseudouridine synthase
CQ11_RS04520	PF00480	ROK family
CQ11_RS04525	PF00497	Bacterial extracellular solute-binding proteins, family 3
CQ11_RS04530	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS04535	PF00005	ABC transporter
CQ11_RS04540	PF07739	TipAS antibiotic-recognition domain
CQ11_RS04540	PF13411	MerR HTH family regulatory protein
CQ11_RS04545	PF02698	DUF218 domain
CQ11_RS04550	PF01196	Ribosomal protein L17
CQ11_RS04555	PF01000	RNA polymerase Rpb3/RpoA insert domain
CQ11_RS04555	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CQ11_RS04555	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CQ11_RS04560	PF00411	Ribosomal protein S11
CQ11_RS04565	PF00416	Ribosomal protein S13/S18
CQ11_RS04570	PF00444	Ribosomal protein L36
CQ11_RS04575	PF01176	Translation initiation factor 1A / IF-1
CQ11_RS04580	PF00557	Metallopeptidase family M24
CQ11_RS04585	PF00406	Adenylate kinase
CQ11_RS04590	PF00344	SecY translocase
CQ11_RS04595	PF00828	Ribosomal protein L18e/L15
CQ11_RS04600	PF00327	Ribosomal protein L30p/L7e
CQ11_RS04605	PF00333	Ribosomal protein S5, N-terminal domain
CQ11_RS04605	PF03719	Ribosomal protein S5, C-terminal domain
CQ11_RS04610	PF00861	Ribosomal L18p/L5e family
CQ11_RS04615	PF00347	Ribosomal protein L6
CQ11_RS04620	PF00410	Ribosomal protein S8
CQ11_RS04625	PF00253	Ribosomal protein S14p/S29e
CQ11_RS04630	PF00281	Ribosomal protein L5
CQ11_RS04630	PF00673	ribosomal L5P family C-terminus
CQ11_RS04635	PF00467	KOW motif
CQ11_RS04635	PF17136	CQ11_RS04635
CQ11_RS04640	PF00238	Ribosomal protein L14p/L23e
CQ11_RS04645	PF00366	Ribosomal protein S17
CQ11_RS04650	PF00831	Ribosomal L29 protein
CQ11_RS04655	PF00252	Ribosomal protein L16p/L10e
CQ11_RS04660	PF00189	Ribosomal protein S3, C-terminal domain
CQ11_RS04660	PF07650	KH domain
CQ11_RS04665	PF00237	Ribosomal protein L22p/L17e
CQ11_RS04670	PF00203	Ribosomal protein S19
CQ11_RS04675	PF00181	Ribosomal Proteins L2, RNA binding domain
CQ11_RS04675	PF03947	Ribosomal Proteins L2, C-terminal domain
CQ11_RS04680	PF00276	Ribosomal protein L23
CQ11_RS04685	PF00573	Ribosomal protein L4/L1 family
CQ11_RS04690	PF00297	Ribosomal protein L3
CQ11_RS04695	PF00338	Ribosomal protein S10p/S20e
CQ11_RS04705	PF00821	Phosphoenolpyruvate carboxykinase
CQ11_RS04710	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS04710	PF03143	Elongation factor Tu C-terminal domain
CQ11_RS04710	PF03144	Elongation factor Tu domain 2
CQ11_RS04715	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS04715	PF00679	Elongation factor G C-terminus
CQ11_RS04715	PF03144	Elongation factor Tu domain 2
CQ11_RS04715	PF03764	Elongation factor G, domain IV
CQ11_RS04715	PF14492	Elongation Factor G, domain II
CQ11_RS04720	PF00177	Ribosomal protein S7p/S5e
CQ11_RS04725	PF00164	Ribosomal protein S12/S23
CQ11_RS04730	PF00324	Amino acid permease
CQ11_RS04735	PF00623	RNA polymerase Rpb1, domain 2
CQ11_RS04735	PF04983	RNA polymerase Rpb1, domain 3
CQ11_RS04735	PF04997	RNA polymerase Rpb1, domain 1
CQ11_RS04735	PF04998	RNA polymerase Rpb1, domain 5
CQ11_RS04735	PF05000	RNA polymerase Rpb1, domain 4
CQ11_RS04740	PF00562	RNA polymerase Rpb2, domain 6
CQ11_RS04740	PF04560	RNA polymerase Rpb2, domain 7
CQ11_RS04740	PF04561	RNA polymerase Rpb2, domain 2
CQ11_RS04740	PF04563	RNA polymerase beta subunit
CQ11_RS04740	PF04565	RNA polymerase Rpb2, domain 3
CQ11_RS04740	PF10385	RNA polymerase beta subunit external 1 domain
CQ11_RS04745	PF00542	Ribosomal protein L7/L12 C-terminal domain
CQ11_RS04745	PF16320	CQ11_RS04745
CQ11_RS04750	PF00466	Ribosomal protein L10
CQ11_RS04755	PF00485	Phosphoribulokinase / Uridine kinase family
CQ11_RS04760	PF00687	Ribosomal protein L1p/L10e family
CQ11_RS04765	PF00298	Ribosomal protein L11, RNA binding domain
CQ11_RS04765	PF03946	Ribosomal protein L11, N-terminal domain
CQ11_RS04770	PF02357	Transcription termination factor nusG
CQ11_RS04775	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
CQ11_RS04785	PF00155	Aminotransferase class I and II
CQ11_RS04790	PF01636	Phosphotransferase enzyme family
CQ11_RS04795	PF00962	Adenosine/AMP deaminase
CQ11_RS04800	PF12697	Alpha/beta hydrolase family
CQ11_RS04805	PF12146	Putative lysophospholipase
CQ11_RS04810	PF01565	FAD binding domain
CQ11_RS04810	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CQ11_RS04815	PF02388	FemAB family
CQ11_RS04820	PF00471	Ribosomal protein L33
CQ11_RS04840	PF04461	Protein of unknown function (DUF520)
CQ11_RS04845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS04850	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CQ11_RS04850	PF16321	CQ11_RS04850
CQ11_RS04855	PF00156	Phosphoribosyl transferase domain
CQ11_RS04860	PF10646	CQ11_RS04860
CQ11_RS04860	PF10647	CQ11_RS04860
CQ11_RS04865	PF00512	His Kinase A (phospho-acceptor) domain
CQ11_RS04865	PF00672	HAMP domain
CQ11_RS04865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS04870	PF00072	Response regulator receiver domain
CQ11_RS04870	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS04880	PF13559	CQ11_RS04880
CQ11_RS04890	PF07726	ATPase family associated with various cellular activities (AAA)
CQ11_RS04895	PF01882	CQ11_RS04895
CQ11_RS04900	PF01944	CQ11_RS04900
CQ11_RS04905	PF06271	CQ11_RS04905
CQ11_RS04915	PF12005	CQ11_RS04915
CQ11_RS04925	PF13641	Glycosyltransferase like family 2
CQ11_RS04930	PF02467	CQ11_RS04930
CQ11_RS04935	PF00459	Inositol monophosphatase family
CQ11_RS04945	PF01758	Sodium Bile acid symporter family
CQ11_RS04950	PF00483	Nucleotidyl transferase
CQ11_RS04955	PF04321	RmlD substrate binding domain
CQ11_RS04965	PF00534	Glycosyl transferases group 1
CQ11_RS04965	PF13579	Glycosyl transferase 4-like domain
CQ11_RS04965	PF13692	Glycosyl transferases group 1
CQ11_RS04980	PF13692	Glycosyl transferases group 1
CQ11_RS04985	PF00005	ABC transporter
CQ11_RS04985	PF14524	Wzt C-terminal domain
CQ11_RS04990	PF01061	CQ11_RS04990
CQ11_RS04995	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CQ11_RS04995	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CQ11_RS04995	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CQ11_RS05005	PF13579	Glycosyl transferase 4-like domain
CQ11_RS05005	PF13692	Glycosyl transferases group 1
CQ11_RS05010	PF02350	UDP-N-acetylglucosamine 2-epimerase
CQ11_RS05020	PF00534	Glycosyl transferases group 1
CQ11_RS05020	PF13439	Glycosyltransferase Family 4
CQ11_RS05030	PF13439	Glycosyltransferase Family 4
CQ11_RS05030	PF13692	Glycosyl transferases group 1
CQ11_RS05035	PF00534	Glycosyl transferases group 1
CQ11_RS05040	PF13440	CQ11_RS05040
CQ11_RS05045	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CQ11_RS05045	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CQ11_RS05050	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CQ11_RS05055	PF00132	Bacterial transferase hexapeptide (six repeats)
CQ11_RS05055	PF14602	Hexapeptide repeat of succinyl-transferase
CQ11_RS05060	PF00535	Glycosyl transferase family 2
CQ11_RS05065	PF10066	CQ11_RS05065
CQ11_RS05070	PF16363	CQ11_RS05070
CQ11_RS05075	PF00535	Glycosyl transferase family 2
CQ11_RS05080	PF13641	Glycosyltransferase like family 2
CQ11_RS05085	PF03816	Cell envelope-related transcriptional attenuator domain
CQ11_RS05090	PF03816	Cell envelope-related transcriptional attenuator domain
CQ11_RS05095	PF04138	CQ11_RS05095
CQ11_RS05100	PF00512	His Kinase A (phospho-acceptor) domain
CQ11_RS05100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS05105	PF00072	Response regulator receiver domain
CQ11_RS05105	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS05110	PF00211	Adenylate and Guanylate cyclase catalytic domain
CQ11_RS05115	PF05960	Bacterial protein of unknown function (DUF885)
CQ11_RS05120	PF02545	Maf-like protein
CQ11_RS05125	PF13229	Right handed beta helix region
CQ11_RS05130	PF00285	Citrate synthase
CQ11_RS05135	PF00155	Aminotransferase class I and II
CQ11_RS05140	PF00037	4Fe-4S binding domain
CQ11_RS05145	PF04294	CQ11_RS05145
CQ11_RS05145	PF12229	Putative peptidoglycan binding domain
CQ11_RS05155	PF00009	Elongation factor Tu GTP binding domain
CQ11_RS05155	PF00679	Elongation factor G C-terminus
CQ11_RS05155	PF03144	Elongation factor Tu domain 2
CQ11_RS05160	PF10756	CQ11_RS05160
CQ11_RS05165	PF00005	ABC transporter
CQ11_RS05165	PF00664	ABC transporter transmembrane region
CQ11_RS05170	PF00005	ABC transporter
CQ11_RS05170	PF00664	ABC transporter transmembrane region
CQ11_RS05175	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CQ11_RS05180	PF00005	ABC transporter
CQ11_RS05180	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CQ11_RS05185	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05185	PF12911	CQ11_RS05185
CQ11_RS05190	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05195	PF03099	Biotin/lipoate A/B protein ligase family
CQ11_RS05200	PF04055	Radical SAM superfamily
CQ11_RS05200	PF16881	CQ11_RS05200
CQ11_RS05205	PF00501	AMP-binding enzyme
CQ11_RS05205	PF13193	AMP-binding enzyme C-terminal domain
CQ11_RS05210	PF02127	Aminopeptidase I zinc metalloprotease (M18)
CQ11_RS05220	PF00102	Protein-tyrosine phosphatase
CQ11_RS05225	PF03971	Monomeric isocitrate dehydrogenase
CQ11_RS05230	PF04143	CQ11_RS05230
CQ11_RS05235	PF01206	Sulfurtransferase TusA
CQ11_RS05240	PF00128	Alpha amylase, catalytic domain
CQ11_RS05240	PF11941	Domain of unknown function (DUF3459)
CQ11_RS05245	PF01055	Glycosyl hydrolases family 31
CQ11_RS05245	PF13802	Galactose mutarotase-like
CQ11_RS05250	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS05255	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05260	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05265	PF00480	ROK family
CQ11_RS05270	PF13377	Periplasmic binding protein-like domain
CQ11_RS05275	PF13419	Haloacid dehalogenase-like hydrolase
CQ11_RS05285	PF16387	CQ11_RS05285
CQ11_RS05290	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05295	PF00005	ABC transporter
CQ11_RS05295	PF08402	TOBE domain
CQ11_RS05300	PF13343	Bacterial extracellular solute-binding protein
CQ11_RS05310	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS05315	PF11716	Mycothiol maleylpyruvate isomerase N-terminal domain
CQ11_RS05320	PF09685	CQ11_RS05320
CQ11_RS05325	PF00005	ABC transporter
CQ11_RS05330	PF00005	ABC transporter
CQ11_RS05335	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05340	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05345	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CQ11_RS05350	PF01226	Formate/nitrite transporter
CQ11_RS05355	PF13302	Acetyltransferase (GNAT) domain
CQ11_RS05360	PF01327	Polypeptide deformylase
CQ11_RS05365	PF01741	Large-conductance mechanosensitive channel, MscL
CQ11_RS05370	PF00881	Nitroreductase family
CQ11_RS05380	PF13649	Methyltransferase domain
CQ11_RS05385	PF04607	Region found in RelA / SpoT proteins
CQ11_RS05390	PF00583	Acetyltransferase (GNAT) family
CQ11_RS05395	PF07972	NrdI Flavodoxin like
CQ11_RS05400	PF00268	Ribonucleotide reductase, small chain
CQ11_RS05405	PF03358	NADPH-dependent FMN reductase
CQ11_RS05410	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS05415	PF07690	Major Facilitator Superfamily
CQ11_RS05420	PF00892	EamA-like transporter family
CQ11_RS05425	PF02274	Amidinotransferase
CQ11_RS05430	PF00696	Amino acid kinase family
CQ11_RS05435	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CQ11_RS05435	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CQ11_RS05440	PF02274	Amidinotransferase
CQ11_RS05445	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS05445	PF13377	Periplasmic binding protein-like domain
CQ11_RS05450	PF00128	Alpha amylase, catalytic domain
CQ11_RS05455	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05460	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS05465	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS05470	PF00128	Alpha amylase, catalytic domain
CQ11_RS05475	PF07690	Major Facilitator Superfamily
CQ11_RS05480	PF01546	Peptidase family M20/M25/M40
CQ11_RS05480	PF07687	Peptidase dimerisation domain
CQ11_RS05485	PF00083	Sugar (and other) transporter
CQ11_RS05500	PF07804	HipA-like C-terminal domain
CQ11_RS05500	PF07805	HipA-like N-terminal domain
CQ11_RS05500	PF13657	HipA N-terminal domain
CQ11_RS05505	PF01381	Helix-turn-helix
CQ11_RS05510	PF08867	CQ11_RS05510
CQ11_RS05525	PF01926	50S ribosome-binding GTPase
CQ11_RS05525	PF06071	Protein of unknown function (DUF933)
CQ11_RS05530	PF02646	CQ11_RS05530
CQ11_RS05535	PF02401	LytB protein
CQ11_RS05540	PF02601	CQ11_RS05540
CQ11_RS05540	PF13742	CQ11_RS05540
CQ11_RS05545	PF02609	Exonuclease VII small subunit
CQ11_RS05550	PF00294	pfkB family carbohydrate kinase
CQ11_RS05555	PF01255	Putative undecaprenyl diphosphate synthase
CQ11_RS05560	PF03006	CQ11_RS05560
CQ11_RS05565	PF02585	GlcNAc-PI de-N-acetylase
CQ11_RS05570	PF01272	Transcription elongation factor, GreA/GreB, C-term
CQ11_RS05570	PF03449	Transcription elongation factor, N-terminal
CQ11_RS05575	PF01625	Peptide methionine sulfoxide reductase
CQ11_RS05585	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CQ11_RS05590	PF00474	Sodium:solute symporter family
CQ11_RS05595	PF00171	Aldehyde dehydrogenase family
CQ11_RS05595	PF01619	Proline dehydrogenase
CQ11_RS05610	PF00005	ABC transporter
CQ11_RS05615	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS05620	PF12811	CQ11_RS05620
CQ11_RS05625	PF00005	ABC transporter
CQ11_RS05640	PF06965	Na+/H+ antiporter 1
CQ11_RS05645	PF02541	Ppx/GppA phosphatase family
CQ11_RS05650	PF04417	CQ11_RS05650
CQ11_RS05655	PF04977	Septum formation initiator
CQ11_RS05665	PF00113	Enolase, C-terminal TIM barrel domain
CQ11_RS05665	PF03952	Enolase, N-terminal domain
CQ11_RS05670	PF01156	Inosine-uridine preferring nucleoside hydrolase
CQ11_RS05675	PF00270	DEAD/DEAH box helicase
CQ11_RS05675	PF00271	Helicase conserved C-terminal domain
CQ11_RS05675	PF02559	CarD-like/TRCF domain
CQ11_RS05675	PF03461	TRCF domain
CQ11_RS05680	PF01195	Peptidyl-tRNA hydrolase
CQ11_RS05685	PF01386	Ribosomal L25p family
CQ11_RS05685	PF14693	Ribosomal protein TL5, C-terminal domain
CQ11_RS05690	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CQ11_RS05690	PF14572	Phosphoribosyl synthetase-associated domain
CQ11_RS05695	PF12804	MobA-like NTP transferase domain
CQ11_RS05705	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS05715	PF13601	Winged helix DNA-binding domain
CQ11_RS05720	PF00005	ABC transporter
CQ11_RS05720	PF13732	CQ11_RS05720
CQ11_RS05725	PF12698	ABC-2 family transporter protein
CQ11_RS05730	PF12802	MarR family
CQ11_RS05735	PF00005	ABC transporter
CQ11_RS05735	PF12848	ABC transporter
CQ11_RS05740	PF00288	GHMP kinases N terminal domain
CQ11_RS05740	PF08544	GHMP kinases C terminal
CQ11_RS05745	PF00398	Ribosomal RNA adenine dimethylase
CQ11_RS05750	PF07501	G5 domain
CQ11_RS05755	PF01026	TatD related DNase
CQ11_RS05760	PF09334	tRNA synthetases class I (M)
CQ11_RS05765	PF00665	Integrase core domain
CQ11_RS05765	PF13276	CQ11_RS05765
CQ11_RS05790	PF01695	IstB-like ATP binding protein
CQ11_RS05795	PF00665	Integrase core domain
CQ11_RS05800	PF08341	Fibronectin-binding protein signal sequence
CQ11_RS05805	PF00857	Isochorismatase family
CQ11_RS05810	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CQ11_RS05815	PF06262	Possibl zinc metallo-peptidase
CQ11_RS05820	PF13231	CQ11_RS05820
CQ11_RS05820	PF16192	CQ11_RS05820
CQ11_RS05825	PF01053	Cys/Met metabolism PLP-dependent enzyme
CQ11_RS05840	PF02635	DsrE/DsrF-like family
CQ11_RS05845	PF00005	ABC transporter
CQ11_RS05860	PF05175	Methyltransferase small domain
CQ11_RS05865	PF02028	BCCT family transporter
CQ11_RS05870	PF01594	CQ11_RS05870
CQ11_RS05885	PF00152	tRNA synthetases class II (D, K and N)
CQ11_RS05885	PF01336	OB-fold nucleic acid binding domain
CQ11_RS05885	PF09924	Uncharacterized conserved protein (DUF2156)
CQ11_RS05885	PF16995	CQ11_RS05885
CQ11_RS05890	PF02652	CQ11_RS05890
CQ11_RS05895	PF02754	CQ11_RS05895
CQ11_RS05900	PF02589	Uncharacterised ACR, YkgG family COG1556
CQ11_RS05900	PF13183	4Fe-4S dicluster domain
CQ11_RS05905	PF02589	Uncharacterised ACR, YkgG family COG1556
CQ11_RS05925	PF00381	PTS HPr component phosphorylation site
CQ11_RS05930	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CQ11_RS05935	PF00367	phosphotransferase system, EIIB
CQ11_RS05935	PF02378	Phosphotransferase system, EIIC
CQ11_RS05940	PF00874	PRD domain
CQ11_RS05940	PF03123	CAT RNA binding domain
CQ11_RS05955	PF00293	NUDIX domain
CQ11_RS05955	PF12535	Hydrolase of X-linked nucleoside diphosphate N terminal
CQ11_RS05960	PF07853	CQ11_RS05960
CQ11_RS05965	PF00391	PEP-utilising enzyme, mobile domain
CQ11_RS05965	PF02896	PEP-utilising enzyme, TIM barrel domain
CQ11_RS05965	PF05524	PEP-utilising enzyme, N-terminal
CQ11_RS05970	PF00381	PTS HPr component phosphorylation site
CQ11_RS05975	PF00874	PRD domain
CQ11_RS05975	PF03123	CAT RNA binding domain
CQ11_RS05980	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
CQ11_RS05980	PF00367	phosphotransferase system, EIIB
CQ11_RS05980	PF02378	Phosphotransferase system, EIIC
CQ11_RS05990	PF12698	ABC-2 family transporter protein
CQ11_RS05995	PF00005	ABC transporter
CQ11_RS06000	PF05167	Uncharacterised ACR (DUF711)
CQ11_RS06005	PF13740	ACT domain
CQ11_RS06010	PF07690	Major Facilitator Superfamily
CQ11_RS06020	PF00444	Ribosomal protein L36
CQ11_RS06025	PF01197	Ribosomal protein L31
CQ11_RS06030	PF00253	Ribosomal protein S14p/S29e
CQ11_RS06035	PF00471	Ribosomal protein L33
CQ11_RS06040	PF00830	Ribosomal L28 family
CQ11_RS06045	PF07683	Cobalamin synthesis protein cobW C-terminal domain
CQ11_RS06050	PF11361	CQ11_RS06050
CQ11_RS06055	PF00083	Sugar (and other) transporter
CQ11_RS06060	PF07859	alpha/beta hydrolase fold
CQ11_RS06060	PF12146	Putative lysophospholipase
CQ11_RS06065	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS06065	PF07702	UTRA domain
CQ11_RS06070	PF00005	ABC transporter
CQ11_RS06075	PF01032	FecCD transport family
CQ11_RS06080	PF01032	FecCD transport family
CQ11_RS06085	PF01497	Periplasmic binding protein
CQ11_RS06095	PF02861	Clp amino terminal domain
CQ11_RS06095	PF10604	Polyketide cyclase / dehydrase and lipid transport
CQ11_RS06100	PF12697	Alpha/beta hydrolase family
CQ11_RS06140	PF00994	Probable molybdopterin binding domain
CQ11_RS06140	PF03453	MoeA N-terminal region (domain I and II)
CQ11_RS06140	PF03454	MoeA C-terminal region (domain IV)
CQ11_RS06145	PF01812	5-formyltetrahydrofolate cyclo-ligase family
CQ11_RS06150	PF13144	SAF-like
CQ11_RS06165	PF12686	CQ11_RS06165
CQ11_RS06175	PF00582	Universal stress protein family
CQ11_RS06185	PF01325	Iron dependent repressor, N-terminal DNA binding domain
CQ11_RS06185	PF02742	Iron dependent repressor, metal binding and dimerisation domain
CQ11_RS06185	PF04023	FeoA domain
CQ11_RS06190	PF00266	Aminotransferase class-V
CQ11_RS06195	PF00860	Permease family
CQ11_RS06200	PF01238	Phosphomannose isomerase type I
CQ11_RS06205	PF11228	CQ11_RS06205
CQ11_RS06210	PF00313	'Cold-shock' DNA-binding domain
CQ11_RS06220	PF04012	CQ11_RS06220
CQ11_RS06230	PF00072	Response regulator receiver domain
CQ11_RS06230	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS06235	PF00512	His Kinase A (phospho-acceptor) domain
CQ11_RS06235	PF00672	HAMP domain
CQ11_RS06235	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS06240	PF01553	Acyltransferase
CQ11_RS06245	PF00106	short chain dehydrogenase
CQ11_RS06255	PF00118	TCP-1/cpn60 chaperonin family
CQ11_RS06260	PF13399	LytR cell envelope-related transcriptional attenuator
CQ11_RS06265	PF11662	CQ11_RS06265
CQ11_RS06270	PF03167	Uracil DNA glycosylase superfamily
CQ11_RS06275	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CQ11_RS06280	PF07690	Major Facilitator Superfamily
CQ11_RS06295	PF13462	Thioredoxin
CQ11_RS06305	PF00005	ABC transporter
CQ11_RS06310	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family
CQ11_RS06310	PF13224	CQ11_RS06310
CQ11_RS06315	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CQ11_RS06315	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CQ11_RS06320	PF00480	ROK family
CQ11_RS06320	PF12802	MarR family
CQ11_RS06325	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS06330	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06335	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06340	PF13320	CQ11_RS06340
CQ11_RS06345	PF04480	Protein of unknown function (DUF559)
CQ11_RS06350	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CQ11_RS06350	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CQ11_RS06355	PF00696	Amino acid kinase family
CQ11_RS06355	PF01842	ACT domain
CQ11_RS06355	PF13840	ACT domain
CQ11_RS06360	PF00633	Helix-hairpin-helix motif
CQ11_RS06360	PF02132	RecR protein
CQ11_RS06360	PF13662	Toprim domain
CQ11_RS06365	PF12169	DNA polymerase III subunits gamma and tau domain III
CQ11_RS06365	PF13177	DNA polymerase III, delta subunit
CQ11_RS06370	PF04328	CQ11_RS06370
CQ11_RS06375	PF02554	CQ11_RS06375
CQ11_RS06375	PF13722	CQ11_RS06375
CQ11_RS06390	PF13399	LytR cell envelope-related transcriptional attenuator
CQ11_RS06395	PF00860	Permease family
CQ11_RS06400	PF04266	ASCH domain
CQ11_RS06410	PF00588	SpoU rRNA Methylase family
CQ11_RS06410	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CQ11_RS06415	PF01406	tRNA synthetases class I (C) catalytic domain
CQ11_RS06415	PF09190	DALR domain
CQ11_RS06420	PF11700	CQ11_RS06420
CQ11_RS06425	PF00005	ABC transporter
CQ11_RS06430	PF04198	Putative sugar-binding domain
CQ11_RS06435	PF02734	DAK2 domain
CQ11_RS06440	PF02733	Dak1 domain
CQ11_RS06445	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS06450	PF00596	Class II Aldolase and Adducin N-terminal domain
CQ11_RS06455	PF03611	CQ11_RS06455
CQ11_RS06460	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
CQ11_RS06465	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CQ11_RS06470	PF01263	Aldose 1-epimerase
CQ11_RS06475	PF13707	CQ11_RS06475
CQ11_RS06480	PF13304	AAA domain
CQ11_RS06485	PF02542	YgbB family
CQ11_RS06490	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CQ11_RS06495	PF02559	CarD-like/TRCF domain
CQ11_RS06500	PF00072	Response regulator receiver domain
CQ11_RS06500	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS06505	PF00512	His Kinase A (phospho-acceptor) domain
CQ11_RS06505	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS06510	PF01895	PhoU domain
CQ11_RS06515	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS06520	PF04203	Sortase family
CQ11_RS06535	PF01345	CQ11_RS06535
CQ11_RS06535	PF05738	Cna protein B-type domain
CQ11_RS06540	PF04299	Putative FMN-binding domain
CQ11_RS06550	PF07690	Major Facilitator Superfamily
CQ11_RS06555	PF01497	Periplasmic binding protein
CQ11_RS06560	PF00005	ABC transporter
CQ11_RS06565	PF01032	FecCD transport family
CQ11_RS06580	PF00884	Sulfatase
CQ11_RS06585	PF00884	Sulfatase
CQ11_RS06595	PF00762	Ferrochelatase
CQ11_RS06600	PF00248	Aldo/keto reductase family
CQ11_RS06610	PF01487	Type I 3-dehydroquinase
CQ11_RS06620	PF13519	von Willebrand factor type A domain
CQ11_RS06625	PF00092	von Willebrand factor type A domain
CQ11_RS06635	PF01882	CQ11_RS06635
CQ11_RS06640	PF07726	ATPase family associated with various cellular activities (AAA)
CQ11_RS06650	PF14256	CQ11_RS06650
CQ11_RS06655	PF00155	Aminotransferase class I and II
CQ11_RS06660	PF04020	CQ11_RS06660
CQ11_RS06665	PF00206	Lyase
CQ11_RS06665	PF08328	Adenylosuccinate lyase C-terminal
CQ11_RS06670	PF09335	CQ11_RS06670
CQ11_RS06680	PF00403	Heavy-metal-associated domain
CQ11_RS06685	PF00122	E1-E2 ATPase
CQ11_RS06685	PF00403	Heavy-metal-associated domain
CQ11_RS06685	PF00702	haloacid dehalogenase-like hydrolase
CQ11_RS06690	PF03706	CQ11_RS06690
CQ11_RS06695	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CQ11_RS06695	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CQ11_RS06695	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CQ11_RS06695	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CQ11_RS06700	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS06705	PF00005	ABC transporter
CQ11_RS06705	PF00664	ABC transporter transmembrane region
CQ11_RS06710	PF00005	ABC transporter
CQ11_RS06710	PF00664	ABC transporter transmembrane region
CQ11_RS06715	PF00005	ABC transporter
CQ11_RS06720	PF02361	Cobalt transport protein
CQ11_RS06725	PF09605	CQ11_RS06725
CQ11_RS06730	PF00107	Zinc-binding dehydrogenase
CQ11_RS06730	PF08240	Alcohol dehydrogenase GroES-like domain
CQ11_RS06740	PF07690	Major Facilitator Superfamily
CQ11_RS06745	PF00459	Inositol monophosphatase family
CQ11_RS06750	PF13407	Periplasmic binding protein domain
CQ11_RS06755	PF02653	CQ11_RS06755
CQ11_RS06760	PF00005	ABC transporter
CQ11_RS06765	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CQ11_RS06765	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CQ11_RS06770	PF01261	Xylose isomerase-like TIM barrel
CQ11_RS06775	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CQ11_RS06775	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CQ11_RS06780	PF00923	Transaldolase
CQ11_RS06785	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS06785	PF07702	UTRA domain
CQ11_RS06790	PF00294	pfkB family carbohydrate kinase
CQ11_RS06800	PF04962	KduI/IolB family
CQ11_RS06805	PF00205	Thiamine pyrophosphate enzyme, central domain
CQ11_RS06805	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CQ11_RS06805	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CQ11_RS06810	PF00171	Aldehyde dehydrogenase family
CQ11_RS06815	PF00005	ABC transporter
CQ11_RS06820	PF01032	FecCD transport family
CQ11_RS06825	PF01032	FecCD transport family
CQ11_RS06830	PF01497	Periplasmic binding protein
CQ11_RS06835	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CQ11_RS06835	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CQ11_RS06840	PF00480	ROK family
CQ11_RS06840	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
CQ11_RS06840	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
CQ11_RS06845	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS06850	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06855	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06860	PF00107	Zinc-binding dehydrogenase
CQ11_RS06860	PF08240	Alcohol dehydrogenase GroES-like domain
CQ11_RS06865	PF00155	Aminotransferase class I and II
CQ11_RS06870	PF06808	CQ11_RS06870
CQ11_RS06875	PF04290	CQ11_RS06875
CQ11_RS06880	PF03480	Bacterial extracellular solute-binding protein, family 7
CQ11_RS06885	PF02614	Glucuronate isomerase
CQ11_RS06890	PF08341	Fibronectin-binding protein signal sequence
CQ11_RS06900	PF03932	CutC family
CQ11_RS06905	PF07171	MlrC C-terminus
CQ11_RS06905	PF07364	Protein of unknown function (DUF1485)
CQ11_RS06910	PF01120	Alpha-L-fucosidase
CQ11_RS06915	PF00480	ROK family
CQ11_RS06920	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CQ11_RS06925	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06930	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06930	PF12911	CQ11_RS06930
CQ11_RS06935	PF00005	ABC transporter
CQ11_RS06935	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CQ11_RS06940	PF00480	ROK family
CQ11_RS06945	PF00480	ROK family
CQ11_RS06950	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS06955	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06960	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS06965	PF09508	Lacto-N-biose phosphorylase
CQ11_RS06970	PF01636	Phosphotransferase enzyme family
CQ11_RS07015	PF13614	AAA domain
CQ11_RS07025	PF00589	Phage integrase family
CQ11_RS07030	PF04326	Divergent AAA domain
CQ11_RS07030	PF13749	ATP-dependent DNA helicase recG C-terminal
CQ11_RS07035	PF00005	ABC transporter
CQ11_RS07035	PF00664	ABC transporter transmembrane region
CQ11_RS07040	PF00005	ABC transporter
CQ11_RS07040	PF00664	ABC transporter transmembrane region
CQ11_RS07045	PF00005	ABC transporter
CQ11_RS07050	PF02361	Cobalt transport protein
CQ11_RS07055	PF09605	CQ11_RS07055
CQ11_RS07065	PF00939	Sodium:sulfate symporter transmembrane region
CQ11_RS07080	PF00293	NUDIX domain
CQ11_RS07085	PF16654	CQ11_RS07085
CQ11_RS07090	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CQ11_RS07095	PF00005	ABC transporter
CQ11_RS07100	PF02653	CQ11_RS07100
CQ11_RS07105	PF02653	CQ11_RS07105
CQ11_RS07110	PF13407	Periplasmic binding protein domain
CQ11_RS07115	PF04198	Putative sugar-binding domain
CQ11_RS07120	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS07120	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS07125	PF07883	Cupin domain
CQ11_RS07130	PF01791	DeoC/LacD family aldolase
CQ11_RS07145	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS07150	PF01661	Macro domain
CQ11_RS07155	PF00881	Nitroreductase family
CQ11_RS07170	PF08212	Lipocalin-like domain
CQ11_RS07175	PF13173	AAA domain
CQ11_RS07175	PF13635	CQ11_RS07175
CQ11_RS07180	PF05958	tRNA (Uracil-5-)-methyltransferase
CQ11_RS07185	PF00270	DEAD/DEAH box helicase
CQ11_RS07185	PF00271	Helicase conserved C-terminal domain
CQ11_RS07185	PF04408	Helicase associated domain (HA2)
CQ11_RS07185	PF08482	CQ11_RS07185
CQ11_RS07195	PF02080	TrkA-C domain
CQ11_RS07195	PF02254	TrkA-N domain
CQ11_RS07200	PF02386	Cation transport protein
CQ11_RS07220	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS07225	PF11070	CQ11_RS07225
CQ11_RS07230	PF01471	Putative peptidoglycan binding domain
CQ11_RS07240	PF00072	Response regulator receiver domain
CQ11_RS07240	PF00486	Transcriptional regulatory protein, C terminal
CQ11_RS07245	PF01702	Queuine tRNA-ribosyltransferase
CQ11_RS07250	PF02592	CQ11_RS07250
CQ11_RS07255	PF01712	Deoxynucleoside kinase
CQ11_RS07260	PF14080	CQ11_RS07260
CQ11_RS07265	PF16107	CQ11_RS07265
CQ11_RS07275	PF00291	Pyridoxal-phosphate dependent enzyme
CQ11_RS07275	PF00585	C-terminal regulatory domain of Threonine dehydratase
CQ11_RS07280	PF13462	Thioredoxin
CQ11_RS07285	PF01553	Acyltransferase
CQ11_RS07290	PF00561	alpha/beta hydrolase fold
CQ11_RS07295	PF00248	Aldo/keto reductase family
CQ11_RS07300	PF08543	Phosphomethylpyrimidine kinase
CQ11_RS07305	PF01966	HD domain
CQ11_RS07310	PF00899	ThiF family
CQ11_RS07315	PF01026	TatD related DNase
CQ11_RS07320	PF05977	Transmembrane secretion effector
CQ11_RS07325	PF00772	DnaB-like helicase N terminal domain
CQ11_RS07325	PF03796	DnaB-like helicase C terminal domain
CQ11_RS07335	PF01554	MatE
CQ11_RS07340	PF02872	5'-nucleotidase, C-terminal domain
CQ11_RS07345	PF01281	Ribosomal protein L9, N-terminal domain
CQ11_RS07345	PF03948	Ribosomal protein L9, C-terminal domain
CQ11_RS07350	PF01084	Ribosomal protein S18
CQ11_RS07355	PF00436	Single-strand binding protein family
CQ11_RS07360	PF01250	Ribosomal protein S6
CQ11_RS07365	PF00905	Penicillin binding protein transpeptidase domain
CQ11_RS07365	PF00912	Transglycosylase
CQ11_RS07370	PF01594	CQ11_RS07370
CQ11_RS07380	PF01743	Poly A polymerase head domain
CQ11_RS07380	PF01966	HD domain
CQ11_RS07380	PF12627	Probable RNA and SrmB- binding site of polymerase A
CQ11_RS07385	PF00293	NUDIX domain
CQ11_RS07400	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS07405	PF00155	Aminotransferase class I and II
CQ11_RS07410	PF01820	D-ala D-ala ligase N-terminus
CQ11_RS07410	PF07478	D-ala D-ala ligase C-terminus
CQ11_RS07415	PF02195	ParB-like nuclease domain
CQ11_RS07420	PF13614	AAA domain
CQ11_RS07425	PF02527	rRNA small subunit methyltransferase G
CQ11_RS07430	PF01424	R3H domain
CQ11_RS07435	PF02096	60Kd inner membrane protein
CQ11_RS07440	PF01809	CQ11_RS07440
CQ11_RS07445	PF00825	Ribonuclease P
CQ11_RS07450	PF00468	Ribosomal protein L34
CQ11_RS07455	PF00308	Bacterial dnaA  protein
CQ11_RS07455	PF08299	Bacterial dnaA protein helix-turn-helix
CQ11_RS07460	PF00712	DNA polymerase III beta subunit, N-terminal domain
CQ11_RS07460	PF02767	DNA polymerase III beta subunit, central domain
CQ11_RS07460	PF02768	DNA polymerase III beta subunit, C-terminal domain
CQ11_RS07465	PF02463	RecF/RecN/SMC N terminal domain
CQ11_RS07470	PF05258	CQ11_RS07470
CQ11_RS07475	PF00204	DNA gyrase B
CQ11_RS07475	PF00986	DNA gyrase B subunit, carboxyl terminus
CQ11_RS07475	PF01751	Toprim domain
CQ11_RS07475	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS07480	PF00521	DNA gyrase/topoisomerase IV, subunit A
CQ11_RS07480	PF03989	DNA gyrase C-terminal domain, beta-propeller
CQ11_RS07485	PF12089	CQ11_RS07485
CQ11_RS07500	PF02655	ATP-grasp domain
CQ11_RS07505	PF02388	FemAB family
CQ11_RS07515	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CQ11_RS07520	PF01694	Rhomboid family
CQ11_RS07525	PF06781	CQ11_RS07525
CQ11_RS07530	PF04203	Sortase family
CQ11_RS07540	PF00069	Protein kinase domain
CQ11_RS07540	PF03793	PASTA domain
CQ11_RS07545	PF00905	Penicillin binding protein transpeptidase domain
CQ11_RS07550	PF01098	CQ11_RS07550
CQ11_RS07555	PF13672	Protein phosphatase 2C
CQ11_RS07560	PF00498	FHA domain
CQ11_RS07565	PF12401	Protein of unknown function (DUF2662)
CQ11_RS07565	PF16697	CQ11_RS07565
CQ11_RS07575	PF00326	Prolyl oligopeptidase family
CQ11_RS07575	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
CQ11_RS07580	PF01323	DSBA-like thioredoxin domain
CQ11_RS07585	PF00075	RNase H
CQ11_RS07590	PF01661	Macro domain
CQ11_RS07600	PF02664	S-Ribosylhomocysteinase (LuxS)
CQ11_RS07605	PF01475	Ferric uptake regulator family
CQ11_RS07610	PF00462	Glutaredoxin
CQ11_RS07615	PF07972	NrdI Flavodoxin like
CQ11_RS07620	PF00317	Ribonucleotide reductase, all-alpha domain
CQ11_RS07620	PF02867	Ribonucleotide reductase, barrel domain
CQ11_RS07620	PF08343	Ribonucleotide reductase N-terminal
CQ11_RS07625	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CQ11_RS07630	PF04235	CQ11_RS07630
CQ11_RS07630	PF07786	CQ11_RS07630
CQ11_RS07635	PF00268	Ribonucleotide reductase, small chain
CQ11_RS07640	PF01451	Low molecular weight phosphotyrosine protein phosphatase
CQ11_RS07650	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS07655	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS07660	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS07665	PF04480	Protein of unknown function (DUF559)
CQ11_RS07675	PF10263	CQ11_RS07675
CQ11_RS07680	PF13738	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS07695	PF00271	Helicase conserved C-terminal domain
CQ11_RS07695	PF04408	Helicase associated domain (HA2)
CQ11_RS07695	PF07717	Oligonucleotide/oligosaccharide-binding (OB)-fold
CQ11_RS07695	PF11898	CQ11_RS07695
CQ11_RS07700	PF00072	Response regulator receiver domain
CQ11_RS07700	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS07705	PF07730	Histidine kinase
CQ11_RS07715	PF00005	ABC transporter
CQ11_RS07720	PF02687	CQ11_RS07720
CQ11_RS07725	PF00005	ABC transporter
CQ11_RS07730	PF07730	Histidine kinase
CQ11_RS07735	PF00072	Response regulator receiver domain
CQ11_RS07735	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS07740	PF01263	Aldose 1-epimerase
CQ11_RS07745	PF03477	ATP cone domain
CQ11_RS07745	PF13597	Anaerobic ribonucleoside-triphosphate reductase
CQ11_RS07750	PF13353	4Fe-4S single cluster domain
CQ11_RS07755	PF01757	CQ11_RS07755
CQ11_RS07760	PF07242	CQ11_RS07760
CQ11_RS07765	PF00005	ABC transporter
CQ11_RS07770	PF01614	Bacterial transcriptional regulator
CQ11_RS07770	PF09339	IclR helix-turn-helix domain
CQ11_RS07775	PF01232	Mannitol dehydrogenase Rossmann domain
CQ11_RS07775	PF08125	Mannitol dehydrogenase C-terminal domain
CQ11_RS07780	PF03786	D-mannonate dehydratase (UxuA)
CQ11_RS07785	PF01081	KDPG and KHG aldolase
CQ11_RS07790	PF00294	pfkB family carbohydrate kinase
CQ11_RS07795	PF00005	ABC transporter
CQ11_RS07800	PF01497	Periplasmic binding protein
CQ11_RS07805	PF01032	FecCD transport family
CQ11_RS07810	PF00005	ABC transporter
CQ11_RS07810	PF00664	ABC transporter transmembrane region
CQ11_RS07815	PF00005	ABC transporter
CQ11_RS07815	PF00664	ABC transporter transmembrane region
CQ11_RS07820	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS07820	PF13377	Periplasmic binding protein-like domain
CQ11_RS07825	PF02065	Melibiase
CQ11_RS07830	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS07835	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS07840	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS07865	PF08681	Protein of unknown function (DUF1778)
CQ11_RS07870	PF05016	Plasmid stabilisation system protein
CQ11_RS07875	PF01420	Type I restriction modification DNA specificity domain
CQ11_RS07880	PF00872	CQ11_RS07880
CQ11_RS07885	PF07508	Recombinase
CQ11_RS07885	PF13408	Recombinase zinc beta ribbon domain
CQ11_RS07895	PF02384	N-6 DNA Methylase
CQ11_RS07895	PF12161	HsdM N-terminal domain
CQ11_RS07900	PF00288	GHMP kinases N terminal domain
CQ11_RS07900	PF08544	GHMP kinases C terminal
CQ11_RS07900	PF10509	Galactokinase galactose-binding signature
CQ11_RS07905	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS07915	PF09949	CQ11_RS07915
CQ11_RS07920	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS07920	PF07702	UTRA domain
CQ11_RS07925	PF00005	ABC transporter
CQ11_RS07930	PF02653	CQ11_RS07930
CQ11_RS07935	PF13407	Periplasmic binding protein domain
CQ11_RS07940	PF00294	pfkB family carbohydrate kinase
CQ11_RS07945	PF02056	Family 4 glycosyl hydrolase
CQ11_RS07945	PF11975	Family 4 glycosyl hydrolase C-terminal domain
CQ11_RS07950	PF00872	CQ11_RS07950
CQ11_RS07995	PF12840	Helix-turn-helix domain
CQ11_RS08010	PF08282	haloacid dehalogenase-like hydrolase
CQ11_RS08015	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CQ11_RS08015	PF02403	Seryl-tRNA synthetase N-terminal domain
CQ11_RS08020	PF00781	Diacylglycerol kinase catalytic domain
CQ11_RS08025	PF04909	Amidohydrolase
CQ11_RS08030	PF00800	Prephenate dehydratase
CQ11_RS08040	PF00535	Glycosyl transferase family 2
CQ11_RS08050	PF12146	Putative lysophospholipase
CQ11_RS08055	PF14681	Uracil phosphoribosyltransferase
CQ11_RS08060	PF14437	CQ11_RS08060
CQ11_RS08070	PF05525	CQ11_RS08070
CQ11_RS08075	PF08903	Domain of unknown function (DUF1846)
CQ11_RS08080	PF00122	E1-E2 ATPase
CQ11_RS08080	PF00702	haloacid dehalogenase-like hydrolase
CQ11_RS08085	PF02597	ThiS family
CQ11_RS08090	PF00899	ThiF family
CQ11_RS08095	PF05738	Cna protein B-type domain
CQ11_RS08100	PF04203	Sortase family
CQ11_RS08110	PF05738	Cna protein B-type domain
CQ11_RS08120	PF00005	ABC transporter
CQ11_RS08120	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08120	PF03459	TOBE domain
CQ11_RS08125	PF13531	Bacterial extracellular solute-binding protein
CQ11_RS08130	PF00994	Probable molybdopterin binding domain
CQ11_RS08135	PF00994	Probable molybdopterin binding domain
CQ11_RS08135	PF03453	MoeA N-terminal region (domain I and II)
CQ11_RS08135	PF03454	MoeA C-terminal region (domain IV)
CQ11_RS08140	PF01967	MoaC family
CQ11_RS08145	PF02391	MoaE protein
CQ11_RS08150	PF04055	Radical SAM superfamily
CQ11_RS08150	PF06463	Molybdenum Cofactor Synthesis C
CQ11_RS08150	PF13353	4Fe-4S single cluster domain
CQ11_RS08160	PF00128	Alpha amylase, catalytic domain
CQ11_RS08170	PF12850	Calcineurin-like phosphoesterase superfamily domain
CQ11_RS08175	PF00905	Penicillin binding protein transpeptidase domain
CQ11_RS08175	PF00912	Transglycosylase
CQ11_RS08175	PF03793	PASTA domain
CQ11_RS08180	PF02467	CQ11_RS08180
CQ11_RS08185	PF14588	YjgF/chorismate_mutase-like, putative endoribonuclease
CQ11_RS08190	PF02661	Fic/DOC family
CQ11_RS08195	PF00027	Cyclic nucleotide-binding domain
CQ11_RS08195	PF13545	Crp-like helix-turn-helix domain
CQ11_RS08200	PF00633	Helix-hairpin-helix motif
CQ11_RS08200	PF00730	HhH-GPD superfamily base excision DNA repair protein
CQ11_RS08200	PF10576	Iron-sulfur binding domain of endonuclease III
CQ11_RS08205	PF00561	alpha/beta hydrolase fold
CQ11_RS08220	PF00437	Type II/IV secretion system protein
CQ11_RS08230	PF00482	Type II secretion system (T2SS), protein F
CQ11_RS08245	PF00270	DEAD/DEAH box helicase
CQ11_RS08245	PF00271	Helicase conserved C-terminal domain
CQ11_RS08245	PF09369	CQ11_RS08245
CQ11_RS08250	PF13443	Cro/C1-type HTH DNA-binding domain
CQ11_RS08255	PF11188	CQ11_RS08255
CQ11_RS08260	PF05175	Methyltransferase small domain
CQ11_RS08265	PF01131	DNA topoisomerase
CQ11_RS08265	PF01751	Toprim domain
CQ11_RS08265	PF13368	CQ11_RS08265
CQ11_RS08270	PF02223	Thymidylate kinase
CQ11_RS08275	PF13177	DNA polymerase III, delta subunit
CQ11_RS08280	PF00561	alpha/beta hydrolase fold
CQ11_RS08290	PF07508	Recombinase
CQ11_RS08290	PF13408	Recombinase zinc beta ribbon domain
CQ11_RS08295	PF13173	AAA domain
CQ11_RS08295	PF13635	CQ11_RS08295
CQ11_RS08305	PF08020	Protein of unknown function (DUF1706)
CQ11_RS08310	PF07690	Major Facilitator Superfamily
CQ11_RS08340	PF06559	2'-deoxycytidine 5'-triphosphate deaminase (DCD)
CQ11_RS08345	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CQ11_RS08345	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CQ11_RS08345	PF04039	CQ11_RS08345
CQ11_RS08345	PF13244	CQ11_RS08345
CQ11_RS08350	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CQ11_RS08355	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CQ11_RS08360	PF01899	CQ11_RS08360
CQ11_RS08370	PF03334	CQ11_RS08370
CQ11_RS08375	PF14019	CQ11_RS08375
CQ11_RS08380	PF13343	Bacterial extracellular solute-binding protein
CQ11_RS08385	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08390	PF00005	ABC transporter
CQ11_RS08395	PF16268	CQ11_RS08395
CQ11_RS08400	PF07690	Major Facilitator Superfamily
CQ11_RS08405	PF07883	Cupin domain
CQ11_RS08415	PF04014	Antidote-toxin recognition MazE
CQ11_RS08420	PF12804	MobA-like NTP transferase domain
CQ11_RS08425	PF13191	AAA ATPase domain
CQ11_RS08430	PF00730	HhH-GPD superfamily base excision DNA repair protein
CQ11_RS08445	PF00480	ROK family
CQ11_RS08450	PF03649	CQ11_RS08450
CQ11_RS08455	PF02613	Nitrate reductase delta subunit
CQ11_RS08460	PF00326	Prolyl oligopeptidase family
CQ11_RS08460	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
CQ11_RS08465	PF04976	CQ11_RS08465
CQ11_RS08470	PF13247	4Fe-4S dicluster domain
CQ11_RS08475	PF00384	Molybdopterin oxidoreductase
CQ11_RS08475	PF01568	Molydopterin dinucleotide binding domain
CQ11_RS08475	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CQ11_RS08480	PF02583	Metal-sensitive transcriptional repressor
CQ11_RS08485	PF00581	Rhodanese-like domain
CQ11_RS08485	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CQ11_RS08485	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CQ11_RS08490	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS08495	PF00156	Phosphoribosyl transferase domain
CQ11_RS08500	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CQ11_RS08500	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CQ11_RS08505	PF01979	Amidohydrolase family
CQ11_RS08510	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CQ11_RS08515	PF00156	Phosphoribosyl transferase domain
CQ11_RS08520	PF01180	Dihydroorotate dehydrogenase
CQ11_RS08525	PF00012	Hsp70 protein
CQ11_RS08530	PF01025	GrpE
CQ11_RS08535	PF00226	DnaJ domain
CQ11_RS08535	PF01556	DnaJ C terminal domain
CQ11_RS08540	PF13411	MerR HTH family regulatory protein
CQ11_RS08545	PF00293	NUDIX domain
CQ11_RS08555	PF07690	Major Facilitator Superfamily
CQ11_RS08560	PF03009	Glycerophosphoryl diester phosphodiesterase family
CQ11_RS08565	PF00326	Prolyl oligopeptidase family
CQ11_RS08575	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CQ11_RS08580	PF14013	CQ11_RS08580
CQ11_RS08585	PF00004	ATPase family associated with various cellular activities (AAA)
CQ11_RS08585	PF02861	Clp amino terminal domain
CQ11_RS08585	PF07724	AAA domain (Cdc48 subfamily)
CQ11_RS08585	PF10431	C-terminal, D2-small domain, of ClpB protein
CQ11_RS08590	PF05154	CQ11_RS08590
CQ11_RS08595	PF00144	Beta-lactamase
CQ11_RS08600	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS08605	PF00106	short chain dehydrogenase
CQ11_RS08615	PF00588	SpoU rRNA Methylase family
CQ11_RS08625	PF01384	CQ11_RS08625
CQ11_RS08630	PF01116	Fructose-bisphosphate aldolase class-II
CQ11_RS08640	PF00709	Adenylosuccinate synthetase
CQ11_RS08645	PF00821	Phosphoenolpyruvate carboxykinase
CQ11_RS08650	PF01259	SAICAR synthetase
CQ11_RS08655	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CQ11_RS08655	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CQ11_RS08665	PF11273	CQ11_RS08665
CQ11_RS08670	PF12728	Helix-turn-helix domain
CQ11_RS08675	PF12277	CQ11_RS08675
CQ11_RS08680	PF07332	CQ11_RS08680
CQ11_RS08685	PF02028	BCCT family transporter
CQ11_RS08700	PF00092	von Willebrand factor type A domain
CQ11_RS08700	PF05738	Cna protein B-type domain
CQ11_RS08705	PF16555	CQ11_RS08705
CQ11_RS08715	PF04203	Sortase family
CQ11_RS08720	PF00056	lactate/malate dehydrogenase, NAD binding domain
CQ11_RS08720	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CQ11_RS08725	PF03023	CQ11_RS08725
CQ11_RS08745	PF00924	Mechanosensitive ion channel
CQ11_RS08750	PF01641	SelR domain
CQ11_RS08755	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS08760	PF00892	EamA-like transporter family
CQ11_RS08775	PF02503	Polyphosphate kinase middle domain
CQ11_RS08775	PF13089	Polyphosphate kinase N-terminal domain
CQ11_RS08775	PF13090	Polyphosphate kinase C-terminal domain
CQ11_RS08780	PF00293	NUDIX domain
CQ11_RS08780	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS08785	PF12849	PBP superfamily domain
CQ11_RS08790	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08795	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08800	PF00005	ABC transporter
CQ11_RS08805	PF01384	CQ11_RS08805
CQ11_RS08810	PF01865	Protein of unknown function DUF47
CQ11_RS08815	PF01235	CQ11_RS08815
CQ11_RS08820	PF02517	CAAX protease self-immunity
CQ11_RS08825	PF00149	Calcineurin-like phosphoesterase
CQ11_RS08825	PF02872	5'-nucleotidase, C-terminal domain
CQ11_RS08835	PF08768	Domain of unknown function (DUF1794)
CQ11_RS08840	PF01571	Aminomethyltransferase folate-binding domain
CQ11_RS08840	PF08669	Glycine cleavage T-protein C-terminal barrel domain
CQ11_RS08845	PF10724	CQ11_RS08845
CQ11_RS08850	PF02580	D-Tyr-tRNA(Tyr) deacylase
CQ11_RS08855	PF00004	ATPase family associated with various cellular activities (AAA)
CQ11_RS08855	PF02151	UvrB/uvrC motif
CQ11_RS08855	PF02861	Clp amino terminal domain
CQ11_RS08855	PF07724	AAA domain (Cdc48 subfamily)
CQ11_RS08855	PF10431	C-terminal, D2-small domain, of ClpB protein
CQ11_RS08860	PF00294	pfkB family carbohydrate kinase
CQ11_RS08865	PF14486	Domain of unknown function (DUF4432)
CQ11_RS08870	PF07690	Major Facilitator Superfamily
CQ11_RS08875	PF04198	Putative sugar-binding domain
CQ11_RS08885	PF13242	HAD-hyrolase-like
CQ11_RS08885	PF13344	Haloacid dehalogenase-like hydrolase
CQ11_RS08890	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS08890	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS08900	PF13685	Iron-containing alcohol dehydrogenase
CQ11_RS08905	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS08905	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS08910	PF00596	Class II Aldolase and Adducin N-terminal domain
CQ11_RS08915	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS08915	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS08920	PF02733	Dak1 domain
CQ11_RS08920	PF02734	DAK2 domain
CQ11_RS08925	PF00107	Zinc-binding dehydrogenase
CQ11_RS08925	PF08240	Alcohol dehydrogenase GroES-like domain
CQ11_RS08930	PF02502	Ribose/Galactose Isomerase
CQ11_RS08935	PF01925	CQ11_RS08935
CQ11_RS08940	PF04055	Radical SAM superfamily
CQ11_RS08940	PF13186	Iron-sulfur cluster-binding domain
CQ11_RS08945	PF00083	Sugar (and other) transporter
CQ11_RS08950	PF13377	Periplasmic binding protein-like domain
CQ11_RS08955	PF00884	Sulfatase
CQ11_RS08965	PF01402	Ribbon-helix-helix protein, copG family
CQ11_RS08970	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08975	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS08980	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS08985	PF01055	Glycosyl hydrolases family 31
CQ11_RS08985	PF13802	Galactose mutarotase-like
CQ11_RS08990	PF00455	CQ11_RS08990
CQ11_RS08990	PF08220	DeoR-like helix-turn-helix domain
CQ11_RS08995	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS09000	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09005	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09010	PF01116	Fructose-bisphosphate aldolase class-II
CQ11_RS09015	PF04587	ADP-specific Phosphofructokinase/Glucokinase conserved region
CQ11_RS09020	PF07221	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CQ11_RS09030	PF01261	Xylose isomerase-like TIM barrel
CQ11_RS09035	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS09035	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS09040	PF13407	Periplasmic binding protein domain
CQ11_RS09045	PF00005	ABC transporter
CQ11_RS09050	PF02653	CQ11_RS09050
CQ11_RS09055	PF00155	Aminotransferase class I and II
CQ11_RS09060	PF03553	CQ11_RS09060
CQ11_RS09065	PF01263	Aldose 1-epimerase
CQ11_RS09070	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CQ11_RS09070	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CQ11_RS09075	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09080	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09085	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS09090	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS09090	PF13377	Periplasmic binding protein-like domain
CQ11_RS09100	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09105	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09110	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS09115	PF00892	EamA-like transporter family
CQ11_RS09125	PF00703	Glycosyl hydrolases family 2
CQ11_RS09125	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CQ11_RS09125	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CQ11_RS09125	PF02929	Beta galactosidase small chain
CQ11_RS09135	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS09135	PF13377	Periplasmic binding protein-like domain
CQ11_RS09140	PF02447	CQ11_RS09140
CQ11_RS09145	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS09145	PF07729	FCD domain
CQ11_RS09150	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
CQ11_RS09150	PF01202	Shikimate kinase
CQ11_RS09150	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
CQ11_RS09165	PF00703	Glycosyl hydrolases family 2
CQ11_RS09165	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CQ11_RS09165	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CQ11_RS09165	PF07532	CQ11_RS09165
CQ11_RS09165	PF16355	CQ11_RS09165
CQ11_RS09170	PF05025	RbsD / FucU transport protein family
CQ11_RS09175	PF00294	pfkB family carbohydrate kinase
CQ11_RS09180	PF13407	Periplasmic binding protein domain
CQ11_RS09185	PF02653	CQ11_RS09185
CQ11_RS09190	PF00005	ABC transporter
CQ11_RS09195	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS09195	PF13377	Periplasmic binding protein-like domain
CQ11_RS09200	PF13489	Methyltransferase domain
CQ11_RS09205	PF00005	ABC transporter
CQ11_RS09210	PF09084	NMT1/THI5 like
CQ11_RS09215	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09220	PF02872	5'-nucleotidase, C-terminal domain
CQ11_RS09230	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS09230	PF13377	Periplasmic binding protein-like domain
CQ11_RS09235	PF00083	Sugar (and other) transporter
CQ11_RS09240	PF02308	CQ11_RS09240
CQ11_RS09250	PF09370	TIM-barrel signal transduction protein
CQ11_RS09255	PF06792	Uncharacterised protein family (UPF0261)
CQ11_RS09260	PF00155	Aminotransferase class I and II
CQ11_RS09270	PF03747	ADP-ribosylglycohydrolase
CQ11_RS09275	PF02361	Cobalt transport protein
CQ11_RS09280	PF00005	ABC transporter
CQ11_RS09285	PF07155	ECF-type riboflavin transporter, S component
CQ11_RS09295	PF12698	ABC-2 family transporter protein
CQ11_RS09300	PF01061	CQ11_RS09300
CQ11_RS09305	PF00005	ABC transporter
CQ11_RS09310	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS09315	PF00881	Nitroreductase family
CQ11_RS09325	PF13274	CQ11_RS09325
CQ11_RS09330	PF08348	CQ11_RS09330
CQ11_RS09330	PF13309	CQ11_RS09330
CQ11_RS09335	PF07693	CQ11_RS09335
CQ11_RS09340	PF12643	CQ11_RS09340
CQ11_RS09345	PF09848	Uncharacterized conserved protein (DUF2075)
CQ11_RS09350	PF13173	AAA domain
CQ11_RS09350	PF13635	CQ11_RS09350
CQ11_RS09360	PF00270	DEAD/DEAH box helicase
CQ11_RS09360	PF00271	Helicase conserved C-terminal domain
CQ11_RS09365	PF09481	CRISPR-associated protein Cse1 (CRISPR_cse1)
CQ11_RS09370	PF09485	CRISPR-associated protein Cse2 (CRISPR_cse2)
CQ11_RS09375	PF09344	CT1975-like protein
CQ11_RS09380	PF09704	CRISPR-associated protein (Cas_Cas5)
CQ11_RS09385	PF08798	CRISPR associated protein
CQ11_RS09390	PF01867	CRISPR associated protein Cas1
CQ11_RS09395	PF07751	CQ11_RS09395
CQ11_RS09400	PF01381	Helix-turn-helix
CQ11_RS09405	PF00128	Alpha amylase, catalytic domain
CQ11_RS09410	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09415	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09420	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS09425	PF00480	ROK family
CQ11_RS09430	PF00391	PEP-utilising enzyme, mobile domain
CQ11_RS09430	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CQ11_RS09430	PF02896	PEP-utilising enzyme, TIM barrel domain
CQ11_RS09435	PF01565	FAD binding domain
CQ11_RS09435	PF02913	FAD linked oxidases, C-terminal domain
CQ11_RS09435	PF13183	4Fe-4S dicluster domain
CQ11_RS09445	PF12146	Putative lysophospholipase
CQ11_RS09450	PF00561	alpha/beta hydrolase fold
CQ11_RS09460	PF00719	Inorganic pyrophosphatase
CQ11_RS09465	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
CQ11_RS09470	PF10103	Uncharacterised conserved protein (DUF2342)
CQ11_RS09475	PF01171	PP-loop family
CQ11_RS09475	PF09179	TilS substrate binding domain
CQ11_RS09480	PF00156	Phosphoribosyl transferase domain
CQ11_RS09485	PF00004	ATPase family associated with various cellular activities (AAA)
CQ11_RS09485	PF01434	Peptidase family M41
CQ11_RS09490	PF01227	GTP cyclohydrolase I
CQ11_RS09495	PF00809	Pterin binding enzyme
CQ11_RS09500	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CQ11_RS09500	PF02152	Dihydroneopterin aldolase
CQ11_RS09505	PF11377	CQ11_RS09505
CQ11_RS09510	PF03703	CQ11_RS09510
CQ11_RS09515	PF03703	CQ11_RS09515
CQ11_RS09520	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS09520	PF13377	Periplasmic binding protein-like domain
CQ11_RS09525	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS09530	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09535	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09540	PF00703	Glycosyl hydrolases family 2
CQ11_RS09540	PF02836	Glycosyl hydrolases family 2, TIM barrel domain
CQ11_RS09540	PF02837	Glycosyl hydrolases family 2, sugar binding domain
CQ11_RS09540	PF02929	Beta galactosidase small chain
CQ11_RS09540	PF16353	CQ11_RS09540
CQ11_RS09545	PF07690	Major Facilitator Superfamily
CQ11_RS09550	PF00381	PTS HPr component phosphorylation site
CQ11_RS09550	PF00391	PEP-utilising enzyme, mobile domain
CQ11_RS09550	PF02896	PEP-utilising enzyme, TIM barrel domain
CQ11_RS09550	PF03610	PTS system fructose IIA component
CQ11_RS09550	PF05524	PEP-utilising enzyme, N-terminal
CQ11_RS09555	PF02734	DAK2 domain
CQ11_RS09560	PF02733	Dak1 domain
CQ11_RS09565	PF10727	Rossmann-like domain
CQ11_RS09565	PF10728	Domain of unknown function (DUF2520)
CQ11_RS09570	PF02569	Pantoate-beta-alanine ligase
CQ11_RS09575	PF02261	Aspartate decarboxylase
CQ11_RS09580	PF13242	HAD-hyrolase-like
CQ11_RS09580	PF13344	Haloacid dehalogenase-like hydrolase
CQ11_RS09585	PF00152	tRNA synthetases class II (D, K and N)
CQ11_RS09585	PF01336	OB-fold nucleic acid binding domain
CQ11_RS09590	PF03176	MMPL family
CQ11_RS09595	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
CQ11_RS09595	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
CQ11_RS09600	PF00230	Major intrinsic protein
CQ11_RS09610	PF08450	SMP-30/Gluconolaconase/LRE-like region
CQ11_RS09615	PF02754	CQ11_RS09615
CQ11_RS09615	PF13183	4Fe-4S dicluster domain
CQ11_RS09620	PF00890	FAD binding domain
CQ11_RS09625	PF01266	FAD dependent oxidoreductase
CQ11_RS09625	PF04324	BFD-like [2Fe-2S] binding domain
CQ11_RS09630	PF04198	Putative sugar-binding domain
CQ11_RS09630	PF13384	Homeodomain-like domain
CQ11_RS09640	PF00633	Helix-hairpin-helix motif
CQ11_RS09640	PF00730	HhH-GPD superfamily base excision DNA repair protein
CQ11_RS09640	PF10576	Iron-sulfur binding domain of endonuclease III
CQ11_RS09650	PF13481	AAA domain
CQ11_RS09650	PF13541	Subunit ChlI of Mg-chelatase
CQ11_RS09655	PF02080	TrkA-C domain
CQ11_RS09655	PF02254	TrkA-N domain
CQ11_RS09660	PF02386	Cation transport protein
CQ11_RS09665	PF12728	Helix-turn-helix domain
CQ11_RS09670	PF12802	MarR family
CQ11_RS09675	PF00300	Histidine phosphatase superfamily (branch 1)
CQ11_RS09680	PF13396	CQ11_RS09680
CQ11_RS09685	PF01040	UbiA prenyltransferase family
CQ11_RS09690	PF00501	AMP-binding enzyme
CQ11_RS09695	PF03595	Voltage-dependent anion channel
CQ11_RS09700	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09705	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09710	PF01547	Bacterial extracellular solute-binding protein
CQ11_RS09715	PF00378	Enoyl-CoA hydratase/isomerase family
CQ11_RS09720	PF13378	Enolase C-terminal domain-like
CQ11_RS09725	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CQ11_RS09725	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CQ11_RS09730	PF13180	PDZ domain
CQ11_RS09730	PF13365	Trypsin-like peptidase domain
CQ11_RS09735	PF00425	chorismate binding enzyme
CQ11_RS09740	PF01209	ubiE/COQ5 methyltransferase family
CQ11_RS09745	PF01494	FAD binding domain
CQ11_RS09750	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
CQ11_RS09755	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CQ11_RS09760	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CQ11_RS09765	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CQ11_RS09770	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
CQ11_RS09775	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CQ11_RS09775	PF10531	SLBB domain
CQ11_RS09775	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CQ11_RS09780	PF00384	Molybdopterin oxidoreductase
CQ11_RS09780	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CQ11_RS09780	PF13510	2Fe-2S iron-sulfur cluster binding domain
CQ11_RS09785	PF00146	NADH dehydrogenase
CQ11_RS09790	PF12838	4Fe-4S dicluster domain
CQ11_RS09795	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CQ11_RS09800	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CQ11_RS09805	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CQ11_RS09805	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CQ11_RS09810	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CQ11_RS09815	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
CQ11_RS09820	PF00348	Polyprenyl synthetase
CQ11_RS09825	PF01043	SecA preprotein cross-linking domain
CQ11_RS09825	PF07516	SecA Wing and Scaffold domain
CQ11_RS09825	PF07517	SecA DEAD-like domain
CQ11_RS09835	PF01476	LysM domain
CQ11_RS09845	PF12728	Helix-turn-helix domain
CQ11_RS09865	PF13476	AAA domain
CQ11_RS09865	PF13558	Putative exonuclease SbcCD, C subunit
CQ11_RS09870	PF00149	Calcineurin-like phosphoesterase
CQ11_RS09870	PF12320	Type 5 capsule protein repressor C-terminal domain
CQ11_RS09875	PF00459	Inositol monophosphatase family
CQ11_RS09880	PF03193	Protein of unknown function, DUF258
CQ11_RS09885	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CQ11_RS09910	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS09910	PF07729	FCD domain
CQ11_RS09915	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CQ11_RS09920	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09925	PF00005	ABC transporter
CQ11_RS09925	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS09925	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
CQ11_RS09930	PF00005	ABC transporter
CQ11_RS09935	PF00701	Dihydrodipicolinate synthetase family
CQ11_RS09940	PF00480	ROK family
CQ11_RS09945	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
CQ11_RS09950	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CQ11_RS09955	PF01979	Amidohydrolase family
CQ11_RS09960	PF04542	Sigma-70 region 2
CQ11_RS09960	PF08281	Sigma-70, region 4
CQ11_RS09970	PF00535	Glycosyl transferase family 2
CQ11_RS09985	PF07690	Major Facilitator Superfamily
CQ11_RS09990	PF00877	NlpC/P60 family
CQ11_RS09995	PF13472	GDSL-like Lipase/Acylhydrolase family
CQ11_RS10000	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
CQ11_RS10000	PF00676	Dehydrogenase E1 component
CQ11_RS10000	PF02779	Transketolase, pyrimidine binding domain
CQ11_RS10000	PF16078	CQ11_RS10000
CQ11_RS10000	PF16870	CQ11_RS10000
CQ11_RS10005	PF00571	CBS domain
CQ11_RS10005	PF01595	CQ11_RS10005
CQ11_RS10005	PF03471	Transporter associated domain
CQ11_RS10010	PF00571	CBS domain
CQ11_RS10010	PF01595	CQ11_RS10010
CQ11_RS10020	PF03009	Glycerophosphoryl diester phosphodiesterase family
CQ11_RS10030	PF01471	Putative peptidoglycan binding domain
CQ11_RS10035	PF00005	ABC transporter
CQ11_RS10060	PF00750	tRNA synthetases class I (R)
CQ11_RS10060	PF03485	Arginyl tRNA synthetase N terminal domain
CQ11_RS10060	PF05746	DALR anticodon binding domain
CQ11_RS10065	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CQ11_RS10065	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CQ11_RS10070	PF00742	Homoserine dehydrogenase
CQ11_RS10070	PF01842	ACT domain
CQ11_RS10070	PF03447	Homoserine dehydrogenase, NAD binding domain
CQ11_RS10075	PF00291	Pyridoxal-phosphate dependent enzyme
CQ11_RS10080	PF00288	GHMP kinases N terminal domain
CQ11_RS10085	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CQ11_RS10085	PF07497	Rho termination factor, RNA-binding domain
CQ11_RS10090	PF01197	Ribosomal protein L31
CQ11_RS10095	PF00472	RF-1 domain
CQ11_RS10095	PF03462	PCRF domain
CQ11_RS10100	PF05175	Methyltransferase small domain
CQ11_RS10105	PF01300	Telomere recombination
CQ11_RS10110	PF00953	Glycosyl transferase family 4
CQ11_RS10115	PF00119	ATP synthase A chain
CQ11_RS10120	PF00137	ATP synthase subunit C
CQ11_RS10125	PF00430	ATP synthase B/B' CF(0)
CQ11_RS10135	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CQ11_RS10135	PF00306	ATP synthase alpha/beta chain, C terminal domain
CQ11_RS10135	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CQ11_RS10140	PF00231	ATP synthase
CQ11_RS10145	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CQ11_RS10145	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CQ11_RS10150	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CQ11_RS10155	PF10739	CQ11_RS10155
CQ11_RS10160	PF01939	Protein of unknown function DUF91
CQ11_RS10170	PF12697	Alpha/beta hydrolase family
CQ11_RS10180	PF05103	DivIVA protein
CQ11_RS10195	PF00085	Thioredoxin
CQ11_RS10195	PF14561	Tetratricopeptide repeat
CQ11_RS10200	PF00128	Alpha amylase, catalytic domain
CQ11_RS10205	PF00356	Bacterial regulatory proteins, lacI family
CQ11_RS10205	PF13377	Periplasmic binding protein-like domain
CQ11_RS10210	PF13416	Bacterial extracellular solute-binding protein
CQ11_RS10215	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS10215	PF16296	CQ11_RS10215
CQ11_RS10220	PF00528	Binding-protein-dependent transport system inner membrane component
CQ11_RS10225	PF14067	CQ11_RS10225
CQ11_RS10230	PF00128	Alpha amylase, catalytic domain
CQ11_RS10230	PF02806	Alpha amylase, C-terminal all-beta domain
CQ11_RS10230	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CQ11_RS10235	PF01636	Phosphotransferase enzyme family
CQ11_RS10240	PF00128	Alpha amylase, catalytic domain
CQ11_RS10240	PF16657	CQ11_RS10240
CQ11_RS10245	PF00128	Alpha amylase, catalytic domain
CQ11_RS10245	PF11896	Domain of unknown function (DUF3416)
CQ11_RS10255	PF00005	ABC transporter
CQ11_RS10270	PF07885	Ion channel
CQ11_RS10275	PF00343	Carbohydrate phosphorylase
CQ11_RS10280	PF00579	tRNA synthetases class I (W and Y)
CQ11_RS10285	PF00128	Alpha amylase, catalytic domain
CQ11_RS10285	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
CQ11_RS10290	PF00293	NUDIX domain
CQ11_RS10290	PF09296	NADH pyrophosphatase-like rudimentary NUDIX domain
CQ11_RS10290	PF09297	NADH pyrophosphatase zinc ribbon domain
CQ11_RS10295	PF00570	HRDC domain
CQ11_RS10295	PF00580	UvrD/REP helicase N-terminal domain
CQ11_RS10295	PF13361	UvrD-like helicase C-terminal domain
CQ11_RS10300	PF00899	ThiF family
CQ11_RS10305	PF10103	Uncharacterised conserved protein (DUF2342)
CQ11_RS10310	PF05362	Lon protease (S16) C-terminal proteolytic domain
CQ11_RS10310	PF13180	PDZ domain
CQ11_RS10320	PF03699	CQ11_RS10320
CQ11_RS10345	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS10350	PF00005	ABC transporter
CQ11_RS10360	PF01699	Sodium/calcium exchanger protein
CQ11_RS10370	PF00890	FAD binding domain
CQ11_RS10370	PF02910	Fumarate reductase flavoprotein C-term
CQ11_RS10375	PF12838	4Fe-4S dicluster domain
CQ11_RS10375	PF13085	2Fe-2S iron-sulfur cluster binding domain
CQ11_RS10380	PF00296	Luciferase-like monooxygenase
CQ11_RS10385	PF03358	NADPH-dependent FMN reductase
CQ11_RS10390	PF00186	Dihydrofolate reductase
CQ11_RS10395	PF00303	Thymidylate synthase
CQ11_RS10400	PF10698	CQ11_RS10400
CQ11_RS10405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS10405	PF07568	CQ11_RS10405
CQ11_RS10405	PF08448	PAS fold
CQ11_RS10405	PF12282	Signal transduction histidine kinase
CQ11_RS10410	PF02467	CQ11_RS10410
CQ11_RS10420	PF00005	ABC transporter
CQ11_RS10425	PF00072	Response regulator receiver domain
CQ11_RS10425	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS10430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CQ11_RS10430	PF07730	Histidine kinase
CQ11_RS10435	PF02586	Uncharacterised ACR, COG2135
CQ11_RS10440	PF00533	BRCA1 C Terminus (BRCT) domain
CQ11_RS10440	PF01653	NAD-dependent DNA ligase adenylation domain
CQ11_RS10440	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
CQ11_RS10440	PF03120	NAD-dependent DNA ligase OB-fold domain
CQ11_RS10440	PF12826	Helix-hairpin-helix motif
CQ11_RS10445	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS10445	PF07702	UTRA domain
CQ11_RS10450	PF03747	ADP-ribosylglycohydrolase
CQ11_RS10455	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
CQ11_RS10460	PF00294	pfkB family carbohydrate kinase
CQ11_RS10465	PF13784	Fic/DOC family N-terminal
CQ11_RS10475	PF13091	PLD-like domain
CQ11_RS10480	PF02686	Glu-tRNAGln amidotransferase C subunit
CQ11_RS10485	PF01425	Amidase
CQ11_RS10490	PF02637	GatB domain
CQ11_RS10490	PF02934	GatB/GatE catalytic domain
CQ11_RS10495	PF00390	Malic enzyme, N-terminal domain
CQ11_RS10495	PF03949	Malic enzyme, NAD binding domain
CQ11_RS10495	PF13291	ACT domain
CQ11_RS10515	PF11382	CQ11_RS10515
CQ11_RS10525	PF01121	Dephospho-CoA kinase
CQ11_RS10530	PF00781	Diacylglycerol kinase catalytic domain
CQ11_RS10540	PF00583	Acetyltransferase (GNAT) family
CQ11_RS10545	PF02699	Preprotein translocase subunit
CQ11_RS10550	PF13673	Acetyltransferase (GNAT) domain
CQ11_RS10555	PF01510	N-acetylmuramoyl-L-alanine amidase
CQ11_RS10555	PF08230	CQ11_RS10555
CQ11_RS10570	PF04213	CQ11_RS10570
CQ11_RS10575	PF12838	4Fe-4S dicluster domain
CQ11_RS10585	PF00176	SNF2 family N-terminal domain
CQ11_RS10585	PF00271	Helicase conserved C-terminal domain
CQ11_RS10590	PF00756	Putative esterase
CQ11_RS10595	PF00069	Protein kinase domain
CQ11_RS10600	PF10531	SLBB domain
CQ11_RS10600	PF12836	Helix-hairpin-helix motif
CQ11_RS10615	PF00392	Bacterial regulatory proteins, gntR family
CQ11_RS10615	PF07702	UTRA domain
CQ11_RS10625	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS10635	PF01183	Glycosyl hydrolases family 25
CQ11_RS10635	PF01471	Putative peptidoglycan binding domain
CQ11_RS10640	PF01420	Type I restriction modification DNA specificity domain
CQ11_RS10645	PF06800	CQ11_RS10645
CQ11_RS10650	PF04854	CQ11_RS10650
CQ11_RS10655	PF13673	Acetyltransferase (GNAT) domain
CQ11_RS10660	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS10670	PF05345	Putative Ig domain
CQ11_RS10670	PF13088	BNR repeat-like domain
CQ11_RS10680	PF13419	Haloacid dehalogenase-like hydrolase
CQ11_RS10700	PF13641	Glycosyltransferase like family 2
CQ11_RS10710	PF00196	Bacterial regulatory proteins, luxR family
CQ11_RS10725	PF06197	CQ11_RS10725
CQ11_RS10730	PF12697	Alpha/beta hydrolase family
CQ11_RS10740	PF04954	Siderophore-interacting protein
CQ11_RS10740	PF08021	Siderophore-interacting FAD-binding domain
CQ11_RS10745	PF00877	NlpC/P60 family
CQ11_RS10750	PF00069	Protein kinase domain
CQ11_RS10755	PF02517	CAAX protease self-immunity
CQ11_RS10760	PF04203	Sortase family
CQ11_RS10775	PF01695	IstB-like ATP binding protein
CQ11_RS10780	PF00440	Bacterial regulatory proteins, tetR family
CQ11_RS10790	PF01048	Phosphorylase superfamily
CQ11_RS10800	PF00722	Glycosyl hydrolases family 16
CQ11_RS10800	PF00754	F5/8 type C domain
CQ11_RS10815	PF14029	CQ11_RS10815
CQ11_RS10820	PF02909	Tetracyclin repressor, C-terminal all-alpha domain
CQ11_RS10825	PF04066	CQ11_RS10825
CQ11_RS10830	PF01839	FG-GAP repeat
CQ11_RS10830	PF12799	Leucine Rich repeats (2 copies)
CQ11_RS10830	PF13855	Leucine rich repeat
CQ11_RS10835	PF00932	Lamin Tail Domain
CQ11_RS10835	PF03372	Endonuclease/Exonuclease/phosphatase family
CQ11_RS10850	PF00455	CQ11_RS10850
CQ11_RS10850	PF08220	DeoR-like helix-turn-helix domain
CQ11_RS10855	PF13635	CQ11_RS10855
CQ11_RS10860	PF00728	Glycosyl hydrolase family 20, catalytic domain
CQ11_RS10860	PF00754	F5/8 type C domain
CQ11_RS10860	PF02838	Glycosyl hydrolase family 20, domain 2
CQ11_RS10870	PF04607	Region found in RelA / SpoT proteins
CQ11_RS10875	PF00877	NlpC/P60 family
CQ11_RS10890	PF08666	SAF domain
CQ11_RS10895	PF07859	alpha/beta hydrolase fold
CQ11_RS10895	PF12146	Putative lysophospholipase
CQ11_RS10900	PF00202	Aminotransferase class-III
CQ11_RS10910	PF01551	Peptidase family M23
CQ11_RS10920	PF00213	ATP synthase delta (OSCP) subunit
CQ11_RS10930	PF00754	F5/8 type C domain
CQ11_RS10930	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
CQ11_RS10930	PF12905	Endo-alpha-N-acetylgalactosaminidase
CQ11_RS10935	PF00728	Glycosyl hydrolase family 20, catalytic domain
CQ11_RS10935	PF00754	F5/8 type C domain
CQ11_RS10935	PF02838	Glycosyl hydrolase family 20, domain 2
CQ11_RS10935	PF10633	NPCBM-associated, NEW3 domain of alpha-galactosidase
CQ11_RS10940	PF00082	Subtilase family