UP3_RS00015	PF00137	ATP synthase subunit C
UP3_RS00020	PF00430	ATP synthase B/B' CF(0)
UP3_RS00025	PF00213	ATP synthase delta (OSCP) subunit
UP3_RS00030	PF00213	ATP synthase delta (OSCP) subunit
UP3_RS00045	PF00231	ATP synthase
UP3_RS00055	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
UP3_RS00115	PF14681	Uracil phosphoribosyltransferase
UP3_RS00225	PF02384	N-6 DNA Methylase
UP3_RS00250	PF00005	ABC transporter
UP3_RS00270	PF02575	YbaB/EbfC DNA-binding family
UP3_RS00290	PF01966	HD domain
UP3_RS00320	PF00712	DNA polymerase III beta subunit, N-terminal domain
UP3_RS00320	PF02767	DNA polymerase III beta subunit, central domain
UP3_RS00320	PF02768	DNA polymerase III beta subunit, C-terminal domain
UP3_RS00325	PF01195	Peptidyl-tRNA hydrolase
UP3_RS00370	PF00005	ABC transporter
UP3_RS00380	PF00392	Bacterial regulatory proteins, gntR family
UP3_RS00420	PF01668	SmpB protein
UP3_RS00505	PF04193	PQ loop repeat
UP3_RS00525	PF01420	Type I restriction modification DNA specificity domain
UP3_RS00555	PF00575	S1 RNA binding domain
UP3_RS00555	PF09371	Tex-like protein N-terminal domain
UP3_RS00555	PF12836	Helix-hairpin-helix motif
UP3_RS00555	PF16921	UP3_RS00555
UP3_RS00600	PF02223	Thymidylate kinase
UP3_RS00605	PF13177	DNA polymerase III, delta subunit
UP3_RS00610	PF01926	50S ribosome-binding GTPase
UP3_RS00610	PF10396	GTP-binding protein TrmE N-terminus
UP3_RS00610	PF12631	Catalytic cysteine-containing C-terminus of GTPase, MnmE
UP3_RS00615	PF01026	TatD related DNase
UP3_RS00625	PF00005	ABC transporter
UP3_RS00645	PF00542	Ribosomal protein L7/L12 C-terminal domain
UP3_RS00645	PF16320	UP3_RS00645
UP3_RS00650	PF00466	Ribosomal protein L10
UP3_RS00670	PF02502	Ribose/Galactose Isomerase
UP3_RS00680	PF05175	Methyltransferase small domain
UP3_RS00690	PF01197	Ribosomal protein L31
UP3_RS00700	PF00468	Ribosomal protein L34
UP3_RS00705	PF00825	Ribonuclease P
UP3_RS00790	PF00381	PTS HPr component phosphorylation site
UP3_RS00825	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
UP3_RS00845	PF00380	Ribosomal protein S9/S16
UP3_RS00890	PF01746	tRNA (Guanine-1)-methyltransferase
UP3_RS00895	PF01245	Ribosomal protein L19
UP3_RS00955	PF00583	Acetyltransferase (GNAT) family
UP3_RS00960	PF01250	Ribosomal protein S6
UP3_RS00970	PF01084	Ribosomal protein S18
UP3_RS00975	PF01281	Ribosomal protein L9, N-terminal domain
UP3_RS00975	PF03948	Ribosomal protein L9, C-terminal domain
UP3_RS01000	PF02686	Glu-tRNAGln amidotransferase C subunit
UP3_RS01020	PF00298	Ribosomal protein L11, RNA binding domain
UP3_RS01020	PF03946	Ribosomal protein L11, N-terminal domain
UP3_RS01025	PF00687	Ribosomal protein L1p/L10e family
UP3_RS01060	PF00471	Ribosomal protein L33
UP3_RS01100	PF00164	Ribosomal protein S12/S23
UP3_RS01235	PF00550	Phosphopantetheine attachment site
UP3_RS01370	PF02130	Uncharacterized protein family UPF0054
UP3_RS01380	PF00156	Phosphoribosyl transferase domain
UP3_RS01480	PF01420	Type I restriction modification DNA specificity domain
UP3_RS01520	PF03193	Protein of unknown function, DUF258
UP3_RS01545	PF00551	Formyl transferase
UP3_RS01545	PF02911	Formyl transferase, C-terminal domain
UP3_RS01560	PF02540	NAD synthase
UP3_RS01580	PF00834	Ribulose-phosphate 3 epimerase family
UP3_RS01595	PF01592	NifU-like N terminal domain
UP3_RS01625	PF00817	impB/mucB/samB family
UP3_RS01625	PF11799	impB/mucB/samB family C-terminal domain
UP3_RS01630	PF01479	S4 domain
UP3_RS01630	PF01728	FtsJ-like methyltransferase
UP3_RS01640	PF00547	Urease, gamma subunit
UP3_RS01655	PF02814	UreE urease accessory protein, N-terminal domain
UP3_RS01655	PF05194	UreE urease accessory protein, C-terminal domain
UP3_RS01690	PF11428	Protein of unknown function (DUF3196)
UP3_RS01720	PF02568	Thiamine biosynthesis protein (ThiI)
UP3_RS01720	PF02926	THUMP domain
UP3_RS01780	PF00226	DnaJ domain
UP3_RS01780	PF00684	DnaJ central domain
UP3_RS01780	PF01556	DnaJ C terminal domain
UP3_RS01785	PF01025	GrpE
UP3_RS01895	PF02381	MraZ protein
UP3_RS01945	PF07198	UP3_RS01945
UP3_RS01975	PF03652	Uncharacterised protein family (UPF0081)
UP3_RS02060	PF01687	Riboflavin kinase
UP3_RS02060	PF06574	FAD synthetase
UP3_RS02085	PF04816	Family of unknown function (DUF633)
UP3_RS02110	PF02616	ScpA/B protein
UP3_RS02125	PF02224	Cytidylate kinase
UP3_RS02150	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
UP3_RS02170	PF01783	Ribosomal L32p protein family
UP3_RS02205	PF00588	SpoU rRNA Methylase family
UP3_RS02205	PF08032	RNA 2'-O ribose methyltransferase substrate binding
UP3_RS02220	PF00009	Elongation factor Tu GTP binding domain
UP3_RS02220	PF00679	Elongation factor G C-terminus
UP3_RS02220	PF03144	Elongation factor Tu domain 2
UP3_RS02220	PF06421	GTP-binding protein LepA C-terminus
UP3_RS02245	PF04296	Protein of unknown function (DUF448)
UP3_RS02275	PF00849	RNA pseudouridylate synthase
UP3_RS02280	PF00814	Glycoprotease family
UP3_RS02290	PF01649	Ribosomal protein S20
UP3_RS02310	PF01261	Xylose isomerase-like TIM barrel
UP3_RS02455	PF00216	Bacterial DNA-binding protein
UP3_RS02465	PF05343	M42 glutamyl aminopeptidase
UP3_RS02480	PF01165	Ribosomal protein S21
UP3_RS02510	PF01230	HIT domain
UP3_RS02535	PF00588	SpoU rRNA Methylase family
UP3_RS02545	PF01926	50S ribosome-binding GTPase
UP3_RS02550	PF03672	UP3_RS02550
UP3_RS02565	PF01205	Uncharacterized protein family UPF0029
UP3_RS02600	PF00416	Ribosomal protein S13/S18
UP3_RS02605	PF00444	Ribosomal protein L36
UP3_RS02610	PF01176	Translation initiation factor 1A / IF-1
UP3_RS02630	PF00828	Ribosomal protein L18e/L15
UP3_RS02635	PF00333	Ribosomal protein S5, N-terminal domain
UP3_RS02635	PF03719	Ribosomal protein S5, C-terminal domain
UP3_RS02665	PF00467	KOW motif
UP3_RS02665	PF17136	UP3_RS02665
UP3_RS02670	PF00238	Ribosomal protein L14p/L23e
UP3_RS02680	PF00831	Ribosomal L29 protein
UP3_RS02710	PF00276	Ribosomal protein L23
UP3_RS02720	PF00297	Ribosomal protein L3
UP3_RS02725	PF00338	Ribosomal protein S10p/S20e
UP3_RS02735	PF01632	Ribosomal protein L35
UP3_RS02775	PF01268	Formate--tetrahydrofolate ligase
UP3_RS02805	PF13672	Protein phosphatase 2C
UP3_RS02820	PF00829	Ribosomal prokaryotic L21 protein
UP3_RS02850	PF02734	DAK2 domain
UP3_RS02850	PF13684	Dihydroxyacetone kinase family
UP3_RS02865	PF00312	Ribosomal protein S15
UP3_RS02925	PF01588	Putative tRNA binding domain
UP3_RS02950	PF00224	Pyruvate kinase, barrel domain
UP3_RS03000	PF03960	ArsC family
UP3_RS03025	PF07198	UP3_RS03025