locus-tag	class	description
UPA3_RS00020	IPR042105	Ribosomal protein L31 superfamily
UPA3_RS00020	IPR027491	Ribosomal protein L31 type A
UPA3_RS00020	IPR002150	Ribosomal protein L31
UPA3_RS00020	IPR034704	L28p-like
UPA3_RS00030	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
UPA3_RS00030	IPR004556	Methyltransferase HemK-like
UPA3_RS00030	IPR040758	Release factor glutamine methyltransferase, N-terminal domain
UPA3_RS00030	IPR019874	Protein-(glutamine-N5) methyltransferase, release factor-specific
UPA3_RS00030	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase
UPA3_RS00030	IPR007848	Methyltransferase small domain
UPA3_RS00040	IPR011860	Ribose 5-phosphate isomerase B, Actinobacteria-type
UPA3_RS00040	IPR003500	Sugar-phosphate isomerase, RpiB/LacA/LacB family
UPA3_RS00040	IPR036569	Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily
UPA3_RS00060	IPR001790	Ribosomal protein L10P
UPA3_RS00060	IPR022973	Ribosomal protein L10
UPA3_RS00060	IPR002363	Ribosomal protein L10, eubacterial, conserved site
UPA3_RS00065	IPR008932	Ribosomal protein L7/L12, oligomerisation
UPA3_RS00065	IPR036235	Ribosomal protein L7/L12, oligomerisation domain superfamily
UPA3_RS00065	IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
UPA3_RS00065	IPR013823	Ribosomal protein L7/L12, C-terminal
UPA3_RS00065	IPR000206	Ribosomal protein L7/L12
UPA3_RS00085	IPR017871	ABC transporter, conserved site
UPA3_RS00085	IPR003593	AAA+ ATPase domain
UPA3_RS00085	IPR003439	ABC transporter-like
UPA3_RS00085	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS00095	IPR018228	Deoxyribonuclease, TatD-related, conserved site
UPA3_RS00095	IPR015991	Uncharacterised hydrolase TatD-type
UPA3_RS00095	IPR001130	TatD family
UPA3_RS00095	IPR032466	Metal-dependent hydrolase
UPA3_RS00100	IPR025867	MnmE, helical domain
UPA3_RS00100	IPR027368	tRNA modification GTPase MnmE domain 2
UPA3_RS00100	IPR004520	tRNA modification GTPase MnmE
UPA3_RS00100	IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1
UPA3_RS00100	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS00100	IPR006073	GTP binding domain
UPA3_RS00100	IPR005225	Small GTP-binding protein domain
UPA3_RS00100	IPR018948	GTP-binding protein TrmE, N-terminal
UPA3_RS00100	IPR031168	TrmE-type guanine nucleotide-binding domain
UPA3_RS00110	IPR018094	Thymidylate kinase
UPA3_RS00110	IPR039430	Thymidylate kinase-like domain
UPA3_RS00110	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS00155	IPR022967	RNA-binding domain, S1
UPA3_RS00155	IPR010994	RuvA domain 2-like
UPA3_RS00155	IPR006641	YqgF/RNase H-like domain
UPA3_RS00155	IPR012340	Nucleic acid-binding, OB-fold
UPA3_RS00155	IPR041692	HHH domain 9
UPA3_RS00155	IPR023323	Tex-like domain superfamily
UPA3_RS00155	IPR032639	Tex protein, YqgF-like domain
UPA3_RS00155	IPR018974	Tex-like protein, N-terminal
UPA3_RS00155	IPR037027	YqgF/RNase H-like domain superfamily
UPA3_RS00155	IPR012337	Ribonuclease H-like superfamily
UPA3_RS00155	IPR023319	Tex-like protein, HTH domain superfamily
UPA3_RS00155	IPR003029	S1 domain
UPA3_RS00190	IPR003356	DNA methylase, adenine-specific
UPA3_RS00190	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
UPA3_RS00190	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase
UPA3_RS00190	IPR025931	TaqI-like C-terminal specificity domain
UPA3_RS00215	IPR006603	PQ-loop repeat
UPA3_RS00220	IPR006603	PQ-loop repeat
UPA3_RS00300	IPR000037	SsrA-binding protein
UPA3_RS00300	IPR023620	Small protein B
UPA3_RS00300	IPR020081	SsrA-binding protein, conserved site
UPA3_RS00360	IPR003439	ABC transporter-like
UPA3_RS00360	IPR003593	AAA+ ATPase domain
UPA3_RS00360	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS00360	IPR017871	ABC transporter, conserved site
UPA3_RS00405	IPR036416	Peptidyl-tRNA hydrolase superfamily
UPA3_RS00405	IPR018171	Peptidyl-tRNA hydrolase, conserved site
UPA3_RS00405	IPR001328	Peptidyl-tRNA hydrolase
UPA3_RS00410	IPR022635	DNA polymerase III, beta sliding clamp, C-terminal
UPA3_RS00410	IPR001001	DNA polymerase III, beta sliding clamp
UPA3_RS00410	IPR022634	DNA polymerase III, beta sliding clamp, N-terminal
UPA3_RS00440	IPR017705	Ribonuclease Y
UPA3_RS00440	IPR036612	K Homology domain, type 1 superfamily
UPA3_RS00440	IPR006675	HDIG domain
UPA3_RS00440	IPR006674	HD domain
UPA3_RS00440	IPR003607	HD/PDEase domain
UPA3_RS00460	IPR036894	Nucleoid-associated protein YbaB-like domain superfamily
UPA3_RS00460	IPR004401	Nucleoid-associated protein YbaB/EbfC family
UPA3_RS00490	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS00490	IPR003593	AAA+ ATPase domain
UPA3_RS00490	IPR003439	ABC transporter-like
UPA3_RS00490	IPR017871	ABC transporter, conserved site
UPA3_RS00505	IPR000055	Restriction endonuclease, type I, HsdS
UPA3_RS00510	IPR000055	Restriction endonuclease, type I, HsdS
UPA3_RS00515	IPR022749	N6 adenine-specific DNA methyltransferase, N-terminal domain
UPA3_RS00515	IPR004546	Restriction endonuclease, type I, HsdM
UPA3_RS00515	IPR038333	N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily
UPA3_RS00515	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase
UPA3_RS00515	IPR002052	DNA methylase, N-6 adenine-specific, conserved site
UPA3_RS00515	IPR003356	DNA methylase, adenine-specific
UPA3_RS00585	IPR036397	Ribonuclease H superfamily
UPA3_RS00585	IPR012337	Ribonuclease H-like superfamily
UPA3_RS00625	IPR034332	Uracil phosphoribosyltransferase, bacterial-type
UPA3_RS00625	IPR005765	Uracil phosphoribosyl transferase
UPA3_RS00625	IPR000836	Phosphoribosyltransferase domain
UPA3_RS00625	IPR029057	Phosphoribosyltransferase-like
UPA3_RS00685	IPR001469	ATP synthase, F1 complex, delta/epsilon subunit
UPA3_RS00685	IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal
UPA3_RS00685	IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
UPA3_RS00695	IPR000131	ATP synthase, F1 complex, gamma subunit
UPA3_RS00695	IPR035968	ATP synthase, F1 complex, gamma subunit superfamily
UPA3_RS00710	IPR000711	ATPase, OSCP/delta subunit
UPA3_RS00710	IPR020781	ATPase, OSCP/delta subunit, conserved site
UPA3_RS00715	IPR026015	F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily
UPA3_RS00715	IPR000711	ATPase, OSCP/delta subunit
UPA3_RS00720	IPR005864	ATP synthase, F0 complex, subunit b, bacterial
UPA3_RS00720	IPR002146	ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast
UPA3_RS00725	IPR002379	V-ATPase proteolipid subunit C-like domain
UPA3_RS00725	IPR000454	ATP synthase, F0 complex, subunit C
UPA3_RS00725	IPR038662	F1F0 ATP synthase subunit C superfamily
UPA3_RS00725	IPR035921	F/V-ATP synthase subunit C superfamily
UPA3_RS00725	IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site
UPA3_RS00925	IPR006504	Transcriptional regulator Spx/MgsR
UPA3_RS00925	IPR006660	Arsenate reductase-like
UPA3_RS00925	IPR036249	Thioredoxin-like superfamily
UPA3_RS00935	IPR001996	Phosphotransferase system, IIB component, type 1
UPA3_RS00935	IPR036878	Glucose permease domain IIB
UPA3_RS00975	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily
UPA3_RS00975	IPR015806	Pyruvate kinase, insert domain superfamily
UPA3_RS00975	IPR036918	Pyruvate kinase, C-terminal domain superfamily
UPA3_RS00975	IPR015793	Pyruvate kinase, barrel
UPA3_RS00975	IPR018209	Pyruvate kinase, active site
UPA3_RS00975	IPR011037	Pyruvate kinase-like, insert domain superfamily
UPA3_RS00975	IPR001697	Pyruvate kinase
UPA3_RS00975	IPR040442	Pyruvate kinase-like domain superfamily
UPA3_RS01000	IPR037154	YtpR-like superfamily
UPA3_RS01000	IPR033714	Phenylalanly tRNA synthetase, tRNA-binding-domain
UPA3_RS01000	IPR002547	tRNA-binding domain
UPA3_RS01000	IPR012340	Nucleic acid-binding, OB-fold
UPA3_RS01020	IPR003593	AAA+ ATPase domain
UPA3_RS01020	IPR032423	AAA C-terminal domain
UPA3_RS01020	IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
UPA3_RS01020	IPR021886	MgsA AAA+ ATPase C-terminal
UPA3_RS01020	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS01020	IPR008824	RuvB-like P-loop domain
UPA3_RS01060	IPR009068	S15/NS1, RNA-binding
UPA3_RS01060	IPR005290	Ribosomal protein S15, bacterial-type
UPA3_RS01060	IPR000589	Ribosomal protein S15
UPA3_RS01075	IPR019986	DAK2 domain-containing protein YloV
UPA3_RS01075	IPR004007	DhaL domain
UPA3_RS01075	IPR036117	DhaL domain superfamily
UPA3_RS01075	IPR033470	Uncharacterised protein, DhaK domain
UPA3_RS01105	IPR036164	L21-like superfamily
UPA3_RS01105	IPR028909	Ribosomal protein L21-like
UPA3_RS01105	IPR001787	Ribosomal protein L21
UPA3_RS01105	IPR018258	Ribosomal protein L21, conserved site
UPA3_RS01120	IPR001932	PPM-type phosphatase domain
UPA3_RS01120	IPR036457	PPM-type phosphatase domain superfamily
UPA3_RS01120	IPR015655	Protein phosphatase 2C family
UPA3_RS01150	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS01150	IPR020628	Formate-tetrahydrofolate ligase, FTHFS, conserved site
UPA3_RS01150	IPR000559	Formate-tetrahydrofolate ligase, FTHFS
UPA3_RS01190	IPR021137	Ribosomal protein L35
UPA3_RS01190	IPR018265	Ribosomal protein L35, conserved site
UPA3_RS01190	IPR037229	Ribosomal protein L35 superfamily
UPA3_RS01190	IPR001706	Ribosomal protein L35, non-mitochondrial
UPA3_RS01200	IPR036838	Ribosomal protein S10 domain superfamily
UPA3_RS01200	IPR027486	Ribosomal protein S10 domain
UPA3_RS01200	IPR001848	Ribosomal protein S10
UPA3_RS01205	IPR000597	Ribosomal protein L3
UPA3_RS01205	IPR019926	Ribosomal protein L3, conserved site
UPA3_RS01205	IPR019927	Ribosomal protein L3, bacterial/organelle-type
UPA3_RS01205	IPR009000	Translation protein, beta-barrel domain superfamily
UPA3_RS01215	IPR012678	Ribosomal protein L23/L15e core domain superfamily
UPA3_RS01215	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
UPA3_RS01215	IPR013025	Ribosomal protein L25/L23
UPA3_RS01245	IPR018254	Ribosomal protein L29, conserved site
UPA3_RS01245	IPR036049	Ribosomal protein L29/L35 superfamily
UPA3_RS01245	IPR001854	Ribosomal protein L29/L35
UPA3_RS01255	IPR005745	Ribosomal protein L14P, bacterial-type
UPA3_RS01255	IPR036853	Ribosomal protein L14 superfamily
UPA3_RS01255	IPR019972	Ribosomal protein L14P,  conserved site
UPA3_RS01255	IPR000218	Ribosomal protein L14P
UPA3_RS01260	IPR005825	Ribosomal protein L24/L26, conserved site
UPA3_RS01260	IPR005824	KOW
UPA3_RS01260	IPR041988	Ribosomal Protein L26/L24, KOW domain
UPA3_RS01260	IPR014722	Ribosomal protein L2, domain 2
UPA3_RS01260	IPR003256	Ribosomal protein L24
UPA3_RS01260	IPR008991	Translation protein SH3-like domain superfamily
UPA3_RS01290	IPR018192	Ribosomal protein S5, N-terminal, conserved site
UPA3_RS01290	IPR013810	Ribosomal protein S5, N-terminal
UPA3_RS01290	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
UPA3_RS01290	IPR020568	Ribosomal protein S5 domain 2-type fold
UPA3_RS01290	IPR005324	Ribosomal protein S5, C-terminal
UPA3_RS01290	IPR005712	Ribosomal protein S5, bacterial-type
UPA3_RS01290	IPR000851	Ribosomal protein S5
UPA3_RS01295	IPR036227	Ribosomal L18e/L15P superfamily
UPA3_RS01295	IPR005749	Ribosomal protein L15, bacterial-type
UPA3_RS01295	IPR021131	Ribosomal protein L18e/L15P
UPA3_RS01295	IPR030878	Ribosomal protein L15
UPA3_RS01315	IPR012340	Nucleic acid-binding, OB-fold
UPA3_RS01315	IPR006196	RNA-binding domain, S1, IF1 type
UPA3_RS01315	IPR022967	RNA-binding domain, S1
UPA3_RS01315	IPR004368	Translation initiation factor IF-1
UPA3_RS01320	IPR035977	Ribosomal protein L36 superfamily
UPA3_RS01320	IPR000473	Ribosomal protein L36
UPA3_RS01325	IPR018269	Ribosomal protein S13, conserved site
UPA3_RS01325	IPR001892	Ribosomal protein S13
UPA3_RS01325	IPR010979	Ribosomal protein S13-like, H2TH
UPA3_RS01325	IPR019980	Ribosomal protein S13, bacterial-type
UPA3_RS01325	IPR027437	30s ribosomal protein S13, C-terminal
UPA3_RS01360	IPR020568	Ribosomal protein S5 domain 2-type fold
UPA3_RS01360	IPR035647	EF-G domain III/V-like
UPA3_RS01360	IPR023582	Impact family
UPA3_RS01360	IPR015796	Impact family, bacterial/archaeal
UPA3_RS01360	IPR001498	Impact, N-terminal
UPA3_RS01360	IPR036956	Impact, N-terminal domain superfamily
UPA3_RS01360	IPR015269	Uncharacterised domain UPF0029, Impact, C-terminal
UPA3_RS01360	IPR020569	Uncharacterised protein family UPF0029, Impact, conserved site
UPA3_RS01375	IPR005359	Protein with unknown function UPF0154
UPA3_RS01380	IPR030393	EngB-type guanine nucleotide-binding (G) domain
UPA3_RS01380	IPR019987	GTP-binding protein, ribosome biogenesis, YsxC
UPA3_RS01380	IPR006073	GTP binding domain
UPA3_RS01380	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS01380	IPR005225	Small GTP-binding protein domain
UPA3_RS01390	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
UPA3_RS01390	IPR001537	tRNA/rRNA methyltransferase, SpoU type
UPA3_RS01390	IPR016914	tRNA (cytidine/uridine-2'-O-)-methyltransferase
UPA3_RS01390	IPR029028	Alpha/beta knot methyltransferases
UPA3_RS01415	IPR011146	HIT-like domain
UPA3_RS01415	IPR036265	HIT-like superfamily
UPA3_RS01415	IPR019808	Histidine triad, conserved site
UPA3_RS01415	IPR039384	HINT family
UPA3_RS01415	IPR001310	Histidine triad (HIT) protein
UPA3_RS01445	IPR001911	Ribosomal protein S21
UPA3_RS01460	IPR023367	Peptidase M42, domain 2
UPA3_RS01460	IPR008007	Peptidase M42
UPA3_RS01470	IPR010992	Integration host factor (IHF)-like DNA-binding domain superfamily
UPA3_RS01470	IPR000119	Histone-like DNA-binding protein
UPA3_RS01615	IPR001719	AP endonuclease 2
UPA3_RS01615	IPR036237	Xylose isomerase-like superfamily
UPA3_RS01615	IPR013022	Xylose isomerase-like, TIM barrel domain
UPA3_RS01615	IPR018246	AP endonuclease 2, zinc binding site
UPA3_RS01635	IPR002583	Ribosomal protein S20
UPA3_RS01635	IPR036510	Ribosomal protein S20 superfamily
UPA3_RS01645	IPR022496	tRNA threonylcarbamoyl adenosine modification protein TsaB
UPA3_RS01645	IPR000905	Gcp-like domain
UPA3_RS01650	IPR020103	Pseudouridine synthase, catalytic domain superfamily
UPA3_RS01650	IPR006225	Pseudouridine synthase, RluC/RluD
UPA3_RS01650	IPR006224	Pseudouridine synthase, RluC/RluD, conserved site
UPA3_RS01650	IPR006145	Pseudouridine synthase, RsuA/RluA
UPA3_RS01650	IPR002942	RNA-binding S4 domain
UPA3_RS01650	IPR036986	RNA-binding S4 domain superfamily
UPA3_RS01705	IPR000795	Transcription factor, GTP-binding domain
UPA3_RS01705	IPR009000	Translation protein, beta-barrel domain superfamily
UPA3_RS01705	IPR005225	Small GTP-binding protein domain
UPA3_RS01705	IPR031157	Tr-type G domain, conserved site
UPA3_RS01705	IPR035654	Elongation factor 4, domain IV
UPA3_RS01705	IPR013842	GTP-binding protein LepA, C-terminal
UPA3_RS01705	IPR038363	LepA, C-terminal domain superfamily
UPA3_RS01705	IPR006297	Elongation factor 4
UPA3_RS01705	IPR004161	Translation elongation factor EFTu-like, domain 2
UPA3_RS01705	IPR000640	Elongation factor EFG, domain V-like
UPA3_RS01705	IPR035647	EF-G domain III/V-like
UPA3_RS01705	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS01720	IPR029064	50S ribosomal protein L30e-like
UPA3_RS01720	IPR001537	tRNA/rRNA methyltransferase, SpoU type
UPA3_RS01720	IPR013123	RNA 2-O ribose methyltransferase, substrate binding
UPA3_RS01720	IPR029028	Alpha/beta knot methyltransferases
UPA3_RS01720	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
UPA3_RS01755	IPR011332	Zinc-binding ribosomal protein
UPA3_RS01755	IPR002677	Ribosomal protein L32p
UPA3_RS01775	IPR020630	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
UPA3_RS01775	IPR020867	Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
UPA3_RS01775	IPR020631	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
UPA3_RS01775	IPR036291	NAD(P)-binding domain superfamily
UPA3_RS01775	IPR000672	Tetrahydrofolate dehydrogenase/cyclohydrolase
UPA3_RS01800	IPR003136	Cytidylate kinase
UPA3_RS01800	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS01800	IPR011994	Cytidylate kinase domain
UPA3_RS01815	IPR003768	Segregation and condensation protein A
UPA3_RS01840	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase
UPA3_RS01840	IPR006901	tRNA methyltransferase TrmK
UPA3_RS01865	IPR015865	Riboflavin kinase domain, bacterial/eukaryotic
UPA3_RS01865	IPR002606	Riboflavin kinase, bacterial
UPA3_RS01865	IPR015864	FAD synthetase
UPA3_RS01865	IPR023382	Adenine nucleotide alpha hydrolase-like domains
UPA3_RS01865	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
UPA3_RS01865	IPR023465	Riboflavin kinase domain superfamily
UPA3_RS01865	IPR004506	tRNA-specific 2-thiouridylase
UPA3_RS01940	IPR012337	Ribonuclease H-like superfamily
UPA3_RS01940	IPR005227	Putative pre-16S rRNA nuclease
UPA3_RS01940	IPR006641	YqgF/RNase H-like domain
UPA3_RS01940	IPR037027	YqgF/RNase H-like domain superfamily
UPA3_RS01970	IPR009849	Domain of unknown function DUF1410
UPA3_RS02020	IPR037914	SpoVT-AbrB domain superfamily
UPA3_RS02020	IPR003444	Transcriptional regulator MraZ
UPA3_RS02020	IPR035644	MraZ, C-terminal
UPA3_RS02020	IPR020603	MraZ domain
UPA3_RS02020	IPR007159	SpoVT-AbrB domain
UPA3_RS02020	IPR038619	MraZ superfamily
UPA3_RS02020	IPR035642	MraZ, N-terminal
UPA3_RS02130	IPR000740	GrpE nucleotide exchange factor
UPA3_RS02130	IPR009012	GrpE nucleotide exchange factor, head
UPA3_RS02135	IPR008971	HSP40/DnaJ peptide-binding
UPA3_RS02135	IPR012724	Chaperone DnaJ
UPA3_RS02135	IPR001305	Heat shock protein DnaJ, cysteine-rich domain
UPA3_RS02135	IPR001623	DnaJ domain
UPA3_RS02135	IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily
UPA3_RS02135	IPR036869	Chaperone J-domain superfamily
UPA3_RS02135	IPR002939	Chaperone DnaJ, C-terminal
UPA3_RS02135	IPR018253	DnaJ domain, conserved site
UPA3_RS02195	IPR003720	tRNA sulfurtransferase ThiI
UPA3_RS02195	IPR004114	THUMP domain
UPA3_RS02195	IPR020536	Thil, AANH domain
UPA3_RS02195	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
UPA3_RS02265	IPR004029	UreE urease accessory, N-terminal
UPA3_RS02265	IPR036675	UreE, C-terminal domain superfamily
UPA3_RS02265	IPR007864	Urease accessory protein UreE, C-terminal domain
UPA3_RS02265	IPR036118	UreE urease accessory, N-terminal domain superfamily
UPA3_RS02265	IPR012406	Urease accessory protein UreE
UPA3_RS02280	IPR012010	Urease, gamma subunit
UPA3_RS02280	IPR036463	Urease, gamma subunit superfamily
UPA3_RS02280	IPR002026	Urease, gamma/gamma-beta subunit
UPA3_RS02290	IPR002877	Ribosomal RNA methyltransferase FtsJ domain
UPA3_RS02290	IPR002942	RNA-binding S4 domain
UPA3_RS02290	IPR036986	RNA-binding S4 domain superfamily
UPA3_RS02290	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase
UPA3_RS02290	IPR004538	Haemolysin A /rRNA methyltransferase TlyA
UPA3_RS02295	IPR036775	DNA polymerase, Y-family, little finger domain superfamily
UPA3_RS02295	IPR001126	UmuC domain
UPA3_RS02295	IPR022880	DNA polymerase IV
UPA3_RS02295	IPR017961	DNA polymerase, Y-family, little finger domain
UPA3_RS02340	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS02340	IPR036390	Winged helix DNA-binding domain superfamily
UPA3_RS02340	IPR003593	AAA+ ATPase domain
UPA3_RS02340	IPR041445	RuvB, AAA lid domain
UPA3_RS02340	IPR004605	DNA helicase, Holliday junction RuvB-type
UPA3_RS02340	IPR008824	RuvB-like P-loop domain
UPA3_RS02340	IPR008823	RuvB C-terminal winged helix domain
UPA3_RS02340	IPR036388	Winged helix-like DNA-binding domain superfamily
UPA3_RS02380	IPR013785	Aldolase-type TIM barrel
UPA3_RS02380	IPR026019	Ribulose-phosphate 3-epimerase
UPA3_RS02380	IPR000056	Ribulose-phosphate 3-epimerase-like
UPA3_RS02380	IPR011060	Ribulose-phosphate binding barrel
UPA3_RS02400	IPR022926	NH(3)-dependent NAD(+) synthetase
UPA3_RS02400	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
UPA3_RS02400	IPR022310	NAD/GMP synthase
UPA3_RS02400	IPR003694	NAD(+) synthetase
UPA3_RS02415	IPR002376	Formyl transferase, N-terminal
UPA3_RS02415	IPR011034	Formyl transferase-like, C-terminal domain superfamily
UPA3_RS02415	IPR005794	Methionyl-tRNA formyltransferase
UPA3_RS02415	IPR036477	Formyl transferase, N-terminal domain superfamily
UPA3_RS02415	IPR005793	Formyl transferase, C-terminal
UPA3_RS02415	IPR041711	Methionyl-tRNA formyltransferase, N-terminal domain
UPA3_RS02440	IPR027417	P-loop containing nucleoside triphosphate hydrolase
UPA3_RS02440	IPR006073	GTP binding domain
UPA3_RS02440	IPR019988	GTP-binding protein, riobosome biogenesis, YqeH
UPA3_RS02440	IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain
UPA3_RS02530	IPR000836	Phosphoribosyltransferase domain
UPA3_RS02530	IPR005764	Adenine phosphoribosyl transferase
UPA3_RS02530	IPR029057	Phosphoribosyltransferase-like
UPA3_RS02540	IPR023091	Metalloprotease catalytic domain superfamily, predicted
UPA3_RS02540	IPR002036	Endoribonuclease YbeY
UPA3_RS02540	IPR020549	Endoribonuclease YbeY, conserved site
UPA3_RS02675	IPR009081	Phosphopantetheine binding ACP domain
UPA3_RS02675	IPR006162	Phosphopantetheine attachment site
UPA3_RS02675	IPR036736	ACP-like superfamily
UPA3_RS02810	IPR006032	Ribosomal protein S12/S23
UPA3_RS02810	IPR005679	Ribosomal protein S12, bacterial-type
UPA3_RS02810	IPR012340	Nucleic acid-binding, OB-fold
UPA3_RS02855	IPR038584	Ribosomal protein L33 superfamily
UPA3_RS02855	IPR018264	Ribosomal protein L33, conserved site
UPA3_RS02855	IPR011332	Zinc-binding ribosomal protein
UPA3_RS02855	IPR001705	Ribosomal protein L33
UPA3_RS02890	IPR002143	Ribosomal protein L1
UPA3_RS02890	IPR023674	Ribosomal protein L1-like
UPA3_RS02890	IPR028364	Ribosomal protein L1/ribosomal biogenesis protein
UPA3_RS02890	IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich
UPA3_RS02890	IPR023673	Ribosomal protein L1, conserved site
UPA3_RS02890	IPR005878	Ribosomal protein L1, bacterial-type
UPA3_RS02895	IPR000911	Ribosomal protein L11/L12
UPA3_RS02895	IPR020784	Ribosomal protein L11, N-terminal
UPA3_RS02895	IPR036769	Ribosomal protein L11, C-terminal domain superfamily
UPA3_RS02895	IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily
UPA3_RS02895	IPR020783	Ribosomal protein L11, C-terminal
UPA3_RS02895	IPR006519	Ribosomal protein L11, bacterial-type
UPA3_RS02895	IPR020785	Ribosomal protein L11, conserved site
UPA3_RS02940	IPR020594	Ribosomal protein L9, bacteria/chloroplast
UPA3_RS02940	IPR009027	Ribosomal protein L9/RNase H1, N-terminal
UPA3_RS02940	IPR000244	Ribosomal protein L9
UPA3_RS02940	IPR020069	Ribosomal protein L9, C-terminal
UPA3_RS02940	IPR036791	Ribosomal protein L9, C-terminal domain superfamily
UPA3_RS02940	IPR020070	Ribosomal protein L9, N-terminal
UPA3_RS02940	IPR036935	Ribosomal protein L9, N-terminal domain superfamily
UPA3_RS02945	IPR036870	Ribosomal protein S18 superfamily
UPA3_RS02945	IPR001648	Ribosomal protein S18
UPA3_RS02955	IPR035980	Ribosomal protein S6 superfamily
UPA3_RS02955	IPR020814	Ribosomal protein S6, plastid/chloroplast
UPA3_RS02955	IPR014717	Translation elongation factor EF1B/ribosomal protein S6
UPA3_RS02955	IPR000529	Ribosomal protein S6
UPA3_RS03020	IPR018257	Ribosomal protein L19, conserved site
UPA3_RS03020	IPR038657	Ribosomal protein L19 superfamily
UPA3_RS03020	IPR001857	Ribosomal protein L19
UPA3_RS03020	IPR008991	Translation protein SH3-like domain superfamily
UPA3_RS03025	IPR016009	tRNA methyltransferase TRMD/TRM10-type domain
UPA3_RS03025	IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal
UPA3_RS03025	IPR023148	tRNA (guanine-N1-)-methyltransferase, C-terminal
UPA3_RS03025	IPR002649	tRNA (guanine-N1-)-methyltransferase, bacteria
UPA3_RS03025	IPR029028	Alpha/beta knot methyltransferases
UPA3_RS03070	IPR000754	Ribosomal protein S9
UPA3_RS03070	IPR023035	Ribosomal protein S9, bacterial/plastid
UPA3_RS03070	IPR020574	Ribosomal protein S9, conserved site
UPA3_RS03070	IPR020568	Ribosomal protein S5 domain 2-type fold
UPA3_RS03070	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
UPA3_RS03210	IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup
UPA3_RS03210	IPR020568	Ribosomal protein S5 domain 2-type fold
UPA3_RS03210	IPR000100	Ribonuclease P
UPA3_RS03210	IPR020539	Ribonuclease P, conserved site
UPA3_RS03215	IPR000271	Ribosomal protein L34
UPA3_RS03215	IPR020939	Ribosomal protein L34, conserved site
