locus-tag class description DSM104440_RS00005 PF11638 DnaA N-terminal domain DSM104440_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DSM104440_RS00005 PF00308 Bacterial dnaA protein DSM104440_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DSM104440_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DSM104440_RS00010 PF02767 DNA polymerase III beta subunit, central domain DSM104440_RS00015 PF01751 Toprim domain DSM104440_RS00015 PF00204 DNA gyrase B DSM104440_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS00015 PF18053 DNA gyrase B subunit insert domain DSM104440_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus DSM104440_RS00020 PF01131 DNA topoisomerase DSM104440_RS00020 PF01751 Toprim domain DSM104440_RS00020 PF13368 Topoisomerase C-terminal repeat DSM104440_RS00025 PF17782 DprA winged helix domain DSM104440_RS00025 PF02481 DNA recombination-mediator protein A DSM104440_RS00035 PF01327 Polypeptide deformylase DSM104440_RS00040 PF02911 Formyl transferase, C-terminal domain DSM104440_RS00040 PF00551 Formyl transferase DSM104440_RS00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS00050 PF00672 HAMP domain DSM104440_RS00050 PF00989 PAS fold DSM104440_RS00050 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS00055 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS00055 PF00072 Response regulator receiver domain DSM104440_RS00055 PF00158 Sigma-54 interaction domain DSM104440_RS00070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSM104440_RS00070 PF00005 ABC transporter DSM104440_RS00075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSM104440_RS00075 PF00005 ABC transporter DSM104440_RS00080 PF12911 N-terminal TM domain of oligopeptide transport permease C DSM104440_RS00080 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS00085 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS00090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS00105 PF00263 Bacterial type II and III secretion system protein DSM104440_RS00105 PF11741 AMIN domain DSM104440_RS00105 PF07660 Secretin and TonB N terminus short domain DSM104440_RS00105 PF03958 Bacterial type II/III secretion system short domain DSM104440_RS00110 PF04351 Pilus assembly protein, PilP DSM104440_RS00115 PF04350 Pilus assembly protein, PilO DSM104440_RS00120 PF05137 Fimbrial assembly protein (PilN) DSM104440_RS00125 PF11104 Type IV pilus assembly protein PilM; DSM104440_RS00130 PF00912 Transglycosylase DSM104440_RS00130 PF17092 Penicillin-binding protein OB-like domain DSM104440_RS00130 PF00905 Penicillin binding protein transpeptidase domain DSM104440_RS00140 PF00490 Delta-aminolevulinic acid dehydratase DSM104440_RS00145 PF01926 50S ribosome-binding GTPase DSM104440_RS00150 PF00034 Cytochrome c DSM104440_RS00155 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS00155 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS00155 PF00563 EAL domain DSM104440_RS00160 PF00202 Aminotransferase class-III DSM104440_RS00165 PF02581 Thiamine monophosphate synthase DSM104440_RS00170 PF08543 Phosphomethylpyrimidine kinase DSM104440_RS00175 PF00301 Rubredoxin DSM104440_RS00180 PF00072 Response regulator receiver domain DSM104440_RS00185 PF00072 Response regulator receiver domain DSM104440_RS00195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS00195 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DSM104440_RS00200 PF00072 Response regulator receiver domain DSM104440_RS00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS00200 PF02895 Signal transducing histidine kinase, homodimeric domain DSM104440_RS00200 PF01584 CheW-like domain DSM104440_RS00200 PF01627 Hpt domain DSM104440_RS00205 PF04616 Glycosyl hydrolases family 43 DSM104440_RS00205 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DSM104440_RS00215 PF00561 alpha/beta hydrolase fold DSM104440_RS00225 PF02673 Bacitracin resistance protein BacA DSM104440_RS00240 PF13667 ThiC-associated domain DSM104440_RS00240 PF01964 Radical SAM ThiC family DSM104440_RS00255 PF00005 ABC transporter DSM104440_RS00270 PF02321 Outer membrane efflux protein DSM104440_RS00275 PF00534 Glycosyl transferases group 1 DSM104440_RS00275 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DSM104440_RS00280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSM104440_RS00285 PF00535 Glycosyl transferase family 2 DSM104440_RS00290 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS00295 PF00483 Nucleotidyl transferase DSM104440_RS00300 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DSM104440_RS00305 PF04321 RmlD substrate binding domain DSM104440_RS00320 PF00999 Sodium/hydrogen exchanger family DSM104440_RS00320 PF02080 TrkA-C domain DSM104440_RS00320 PF02254 TrkA-N domain DSM104440_RS00325 PF01380 SIS domain DSM104440_RS00325 PF00571 CBS domain DSM104440_RS00345 PF00005 ABC transporter DSM104440_RS00350 PF04552 Sigma-54, DNA binding domain DSM104440_RS00350 PF04963 Sigma-54 factor, core binding domain DSM104440_RS00350 PF00309 Sigma-54 factor, Activator interacting domain (AID) DSM104440_RS00355 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DSM104440_RS00360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DSM104440_RS00365 PF07475 HPr Serine kinase C-terminal domain DSM104440_RS00365 PF02603 HPr Serine kinase N terminus DSM104440_RS00370 PF03668 P-loop ATPase protein family DSM104440_RS00380 PF14815 NUDIX domain DSM104440_RS00380 PF00633 Helix-hairpin-helix motif DSM104440_RS00380 PF00730 HhH-GPD superfamily base excision DNA repair protein DSM104440_RS00390 PF06580 Histidine kinase DSM104440_RS00390 PF07694 5TMR of 5TMR-LYT DSM104440_RS00395 PF04397 LytTr DNA-binding domain DSM104440_RS00395 PF00072 Response regulator receiver domain DSM104440_RS00400 PF02597 ThiS family DSM104440_RS00400 PF05690 Thiazole biosynthesis protein ThiG DSM104440_RS00405 PF05690 Thiazole biosynthesis protein ThiG DSM104440_RS00415 PF02390 Putative methyltransferase DSM104440_RS00425 PF04055 Radical SAM superfamily DSM104440_RS00425 PF06969 HemN C-terminal domain DSM104440_RS00430 PF01725 Ham1 family DSM104440_RS00435 PF03725 3' exoribonuclease family, domain 2 DSM104440_RS00435 PF01138 3' exoribonuclease family, domain 1 DSM104440_RS00445 PF03793 PASTA domain DSM104440_RS00445 PF00069 Protein kinase domain DSM104440_RS00450 PF08340 Domain of unknown function (DUF1732) DSM104440_RS00450 PF03755 YicC-like family, N-terminal region DSM104440_RS00455 PF00625 Guanylate kinase DSM104440_RS00460 PF01192 RNA polymerase Rpb6 DSM104440_RS00465 PF04607 Region found in RelA / SpoT proteins DSM104440_RS00465 PF02824 TGS domain DSM104440_RS00465 PF13291 ACT domain DSM104440_RS00470 PF01042 Endoribonuclease L-PSP DSM104440_RS00475 PF17191 RecG wedge domain DSM104440_RS00475 PF00270 DEAD/DEAH box helicase DSM104440_RS00475 PF00271 Helicase conserved C-terminal domain DSM104440_RS00480 PF04345 Chorismate lyase DSM104440_RS00485 PF01040 UbiA prenyltransferase family DSM104440_RS00490 PF02525 Flavodoxin-like fold DSM104440_RS00495 PF00999 Sodium/hydrogen exchanger family DSM104440_RS00495 PF02254 TrkA-N domain DSM104440_RS00500 PF00108 Thiolase, N-terminal domain DSM104440_RS00500 PF02803 Thiolase, C-terminal domain DSM104440_RS00515 PF01979 Amidohydrolase family DSM104440_RS00520 PF01740 STAS domain DSM104440_RS00520 PF00916 Sulfate permease family DSM104440_RS00525 PF00072 Response regulator receiver domain DSM104440_RS00525 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS00530 PF13188 PAS domain DSM104440_RS00530 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS00530 PF08448 PAS fold DSM104440_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS00530 PF00072 Response regulator receiver domain DSM104440_RS00565 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system DSM104440_RS00675 PF00589 Phage integrase family DSM104440_RS00675 PF13495 Phage integrase, N-terminal SAM-like domain DSM104440_RS00680 PF00437 Type II/IV secretion system protein DSM104440_RS00685 PF00437 Type II/IV secretion system protein DSM104440_RS00690 PF01168 Alanine racemase, N-terminal domain DSM104440_RS00695 PF03807 NADP oxidoreductase coenzyme F420-dependent DSM104440_RS00695 PF14748 Pyrroline-5-carboxylate reductase dimerisation DSM104440_RS00700 PF02325 YGGT family DSM104440_RS00705 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS00705 PF00501 AMP-binding enzyme DSM104440_RS00710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS00710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS00710 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS00715 PF01636 Phosphotransferase enzyme family DSM104440_RS00725 PF02803 Thiolase, C-terminal domain DSM104440_RS00725 PF00108 Thiolase, N-terminal domain DSM104440_RS00730 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS00730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSM104440_RS00730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSM104440_RS00735 PF00005 ABC transporter DSM104440_RS00740 PF00005 ABC transporter DSM104440_RS00745 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS00750 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS00755 PF13458 Periplasmic binding protein DSM104440_RS00760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS00760 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS00760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS00765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS00765 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS00765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS00770 PF04029 2-phosphosulpholactate phosphatase DSM104440_RS00775 PF00106 short chain dehydrogenase DSM104440_RS00780 PF00107 Zinc-binding dehydrogenase DSM104440_RS00780 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS00785 PF01614 Bacterial transcriptional regulator DSM104440_RS00785 PF09339 IclR helix-turn-helix domain DSM104440_RS00810 PF10150 Ribonuclease E/G family DSM104440_RS00810 PF00575 S1 RNA binding domain DSM104440_RS00815 PF02545 Maf-like protein DSM104440_RS00820 PF02590 Predicted SPOUT methyltransferase DSM104440_RS00830 PF01467 Cytidylyltransferase-like DSM104440_RS00835 PF00171 Aldehyde dehydrogenase family DSM104440_RS00850 PF09334 tRNA synthetases class I (M) DSM104440_RS00850 PF13603 Leucyl-tRNA synthetase, Domain 2 DSM104440_RS00850 PF08264 Anticodon-binding domain of tRNA DSM104440_RS00850 PF00133 tRNA synthetases class I (I, L, M and V) DSM104440_RS00880 PF13361 UvrD-like helicase C-terminal domain DSM104440_RS00880 PF00580 UvrD/REP helicase N-terminal domain DSM104440_RS00895 PF01636 Phosphotransferase enzyme family DSM104440_RS00905 PF03641 Possible lysine decarboxylase DSM104440_RS00910 PF01367 5'-3' exonuclease, C-terminal SAM fold DSM104440_RS00910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DSM104440_RS00910 PF01612 3'-5' exonuclease DSM104440_RS00910 PF00476 DNA polymerase family A DSM104440_RS00915 PF03481 Putative GTP-binding controlling metal-binding DSM104440_RS00915 PF01300 Telomere recombination DSM104440_RS00925 PF13545 Crp-like helix-turn-helix domain DSM104440_RS00925 PF00027 Cyclic nucleotide-binding domain DSM104440_RS00940 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DSM104440_RS00940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS00950 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS00955 PF05378 Hydantoinase/oxoprolinase N-terminal region DSM104440_RS00955 PF01968 Hydantoinase/oxoprolinase DSM104440_RS00975 PF01207 Dihydrouridine synthase (Dus) DSM104440_RS00980 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS00985 PF02142 MGS-like domain DSM104440_RS00985 PF01808 AICARFT/IMPCHase bienzyme DSM104440_RS00990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DSM104440_RS00990 PF02843 Phosphoribosylglycinamide synthetase, C domain DSM104440_RS00990 PF02844 Phosphoribosylglycinamide synthetase, N domain DSM104440_RS01010 PF01218 Coproporphyrinogen III oxidase DSM104440_RS01030 PF03793 PASTA domain DSM104440_RS01030 PF00069 Protein kinase domain DSM104440_RS01035 PF08448 PAS fold DSM104440_RS01035 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS01035 PF00072 Response regulator receiver domain DSM104440_RS01035 PF13188 PAS domain DSM104440_RS01040 PF00005 ABC transporter DSM104440_RS01045 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSM104440_RS01045 PF00005 ABC transporter DSM104440_RS01050 PF11862 Domain of unknown function (DUF3382) DSM104440_RS01050 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS01055 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS01060 PF13458 Periplasmic binding protein DSM104440_RS01065 PF13458 Periplasmic binding protein DSM104440_RS01075 PF03190 Protein of unknown function, DUF255 DSM104440_RS01090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DSM104440_RS01090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DSM104440_RS01095 PF00730 HhH-GPD superfamily base excision DNA repair protein DSM104440_RS01095 PF06029 AlkA N-terminal domain DSM104440_RS01125 PF00248 Aldo/keto reductase family DSM104440_RS01135 PF03466 LysR substrate binding domain DSM104440_RS01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS01150 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS01155 PF00920 Dehydratase family DSM104440_RS01165 PF01790 Prolipoprotein diacylglyceryl transferase DSM104440_RS01190 PF02515 CoA-transferase family III DSM104440_RS01235 PF00072 Response regulator receiver domain DSM104440_RS01235 PF00196 Bacterial regulatory proteins, luxR family DSM104440_RS01245 PF00672 HAMP domain DSM104440_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS01245 PF07730 Histidine kinase DSM104440_RS01255 PF07043 Protein of unknown function (DUF1328) DSM104440_RS01270 PF05957 Bacterial protein of unknown function (DUF883) DSM104440_RS01275 PF04972 BON domain DSM104440_RS01290 PF05532 CsbD-like DSM104440_RS01295 PF01594 AI-2E family transporter DSM104440_RS01305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DSM104440_RS01305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DSM104440_RS01310 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS01310 PF00072 Response regulator receiver domain DSM104440_RS01315 PF00672 HAMP domain DSM104440_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS01315 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS01320 PF08447 PAS fold DSM104440_RS01320 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS01320 PF00563 EAL domain DSM104440_RS01320 PF08448 PAS fold DSM104440_RS01335 PF01053 Cys/Met metabolism PLP-dependent enzyme DSM104440_RS01340 PF03881 Fructosamine kinase DSM104440_RS01355 PF13495 Phage integrase, N-terminal SAM-like domain DSM104440_RS01355 PF00589 Phage integrase family DSM104440_RS01585 PF03992 Antibiotic biosynthesis monooxygenase DSM104440_RS01620 PF00265 Thymidine kinase DSM104440_RS01630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS01670 PF01022 Bacterial regulatory protein, arsR family DSM104440_RS01725 PF03060 Nitronate monooxygenase DSM104440_RS01770 PF01230 HIT domain DSM104440_RS01845 PF04229 GrpB protein DSM104440_RS01845 PF13673 Acetyltransferase (GNAT) domain DSM104440_RS01880 PF01938 TRAM domain DSM104440_RS01880 PF05958 tRNA (Uracil-5-)-methyltransferase DSM104440_RS01885 PF00583 Acetyltransferase (GNAT) family DSM104440_RS01900 PF01590 GAF domain DSM104440_RS01900 PF00360 Phytochrome region DSM104440_RS01900 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS01900 PF00563 EAL domain DSM104440_RS01965 PF10502 Signal peptidase, peptidase S26 DSM104440_RS01970 PF00005 ABC transporter DSM104440_RS01975 PF01032 FecCD transport family DSM104440_RS01980 PF01497 Periplasmic binding protein DSM104440_RS01985 PF01841 Transglutaminase-like superfamily DSM104440_RS01990 PF12728 Helix-turn-helix domain DSM104440_RS01990 PF12727 PBP superfamily domain DSM104440_RS02000 PF12849 PBP superfamily domain DSM104440_RS02005 PF00005 ABC transporter DSM104440_RS02010 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS02015 PF03459 TOBE domain DSM104440_RS02015 PF00005 ABC transporter DSM104440_RS02020 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS02035 PF00462 Glutaredoxin DSM104440_RS02045 PF17827 PrmC N-terminal domain DSM104440_RS02045 PF05175 Methyltransferase small domain DSM104440_RS02050 PF03462 PCRF domain DSM104440_RS02050 PF00472 RF-1 domain DSM104440_RS02055 PF01488 Shikimate / quinate 5-dehydrogenase DSM104440_RS02055 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DSM104440_RS02055 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DSM104440_RS02060 PF00255 Glutathione peroxidase DSM104440_RS02065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSM104440_RS02065 PF00437 Type II/IV secretion system protein DSM104440_RS02070 PF00482 Type II secretion system (T2SS), protein F DSM104440_RS02075 PF06750 Bacterial Peptidase A24 N-terminal domain DSM104440_RS02075 PF01478 Type IV leader peptidase family DSM104440_RS02080 PF01121 Dephospho-CoA kinase DSM104440_RS02085 PF07072 Cell division protein DSM104440_RS02090 PF03884 DNA gyrase inhibitor YacG DSM104440_RS02100 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DSM104440_RS02100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DSM104440_RS02105 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSM104440_RS02110 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DSM104440_RS02120 PF00510 Cytochrome c oxidase subunit III DSM104440_RS02140 PF01040 UbiA prenyltransferase family DSM104440_RS02145 PF02630 SCO1/SenC DSM104440_RS02155 PF00140 Sigma-70 factor, region 1.2 DSM104440_RS02155 PF04545 Sigma-70, region 4 DSM104440_RS02155 PF04542 Sigma-70 region 2 DSM104440_RS02160 PF18075 FtsX extracellular domain DSM104440_RS02165 PF00005 ABC transporter DSM104440_RS02170 PF00448 SRP54-type protein, GTPase domain DSM104440_RS02170 PF02881 SRP54-type protein, helical bundle domain DSM104440_RS02180 PF01467 Cytidylyltransferase-like DSM104440_RS02185 PF00037 4Fe-4S binding domain DSM104440_RS02190 PF00350 Dynamin family DSM104440_RS02195 PF06827 Zinc finger found in FPG and IleRS DSM104440_RS02195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DSM104440_RS02195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DSM104440_RS02205 PF03550 Outer membrane lipoprotein LolB DSM104440_RS02210 PF08544 GHMP kinases C terminal DSM104440_RS02210 PF00288 GHMP kinases N terminal domain DSM104440_RS02220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DSM104440_RS02220 PF14572 Phosphoribosyl synthetase-associated domain DSM104440_RS02225 PF14693 Ribosomal protein TL5, C-terminal domain DSM104440_RS02225 PF01386 Ribosomal L25p family DSM104440_RS02230 PF01195 Peptidyl-tRNA hydrolase DSM104440_RS02235 PF01926 50S ribosome-binding GTPase DSM104440_RS02235 PF06071 Protein of unknown function (DUF933) DSM104440_RS02240 PF00916 Sulfate permease family DSM104440_RS02240 PF01740 STAS domain DSM104440_RS02265 PF00135 Carboxylesterase family DSM104440_RS02275 PF00501 AMP-binding enzyme DSM104440_RS02275 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS02285 PF00135 Carboxylesterase family DSM104440_RS02290 PF13458 Periplasmic binding protein DSM104440_RS02295 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS02305 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSM104440_RS02305 PF00005 ABC transporter DSM104440_RS02310 PF00005 ABC transporter DSM104440_RS02315 PF00106 short chain dehydrogenase DSM104440_RS02320 PF03167 Uracil DNA glycosylase superfamily DSM104440_RS02325 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02335 PF05736 OprF membrane domain DSM104440_RS02335 PF00691 OmpA family DSM104440_RS02345 PF00919 Uncharacterized protein family UPF0004 DSM104440_RS02345 PF01938 TRAM domain DSM104440_RS02345 PF04055 Radical SAM superfamily DSM104440_RS02355 PF02562 PhoH-like protein DSM104440_RS02360 PF02130 Uncharacterized protein family UPF0054 DSM104440_RS02365 PF03471 Transporter associated domain DSM104440_RS02365 PF00571 CBS domain DSM104440_RS02370 PF00795 Carbon-nitrogen hydrolase DSM104440_RS02375 PF00535 Glycosyl transferase family 2 DSM104440_RS02390 PF02091 Glycyl-tRNA synthetase alpha subunit DSM104440_RS02395 PF05746 DALR anticodon binding domain DSM104440_RS02395 PF02092 Glycyl-tRNA synthetase beta subunit DSM104440_RS02415 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS02420 PF00398 Ribosomal RNA adenine dimethylase DSM104440_RS02425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DSM104440_RS02430 PF09312 SurA N-terminal domain DSM104440_RS02430 PF00639 PPIC-type PPIASE domain DSM104440_RS02435 PF03968 OstA-like protein DSM104440_RS02435 PF04453 LPS transport system D DSM104440_RS02440 PF01636 Phosphotransferase enzyme family DSM104440_RS02445 PF00483 Nucleotidyl transferase DSM104440_RS02450 PF00557 Metallopeptidase family M24 DSM104440_RS02450 PF05195 Aminopeptidase P, N-terminal domain DSM104440_RS02455 PF01494 FAD binding domain DSM104440_RS02460 PF01494 FAD binding domain DSM104440_RS02465 PF10411 Disulfide bond isomerase protein N-terminus DSM104440_RS02465 PF13098 Thioredoxin-like domain DSM104440_RS02470 PF06725 3D domain DSM104440_RS02470 PF03562 MltA specific insert domain DSM104440_RS02475 PF04379 ApaG domain DSM104440_RS02480 PF00834 Ribulose-phosphate 3 epimerase family DSM104440_RS02485 PF00425 chorismate binding enzyme DSM104440_RS02485 PF04715 Anthranilate synthase component I, N terminal region DSM104440_RS02490 PF00117 Glutamine amidotransferase class-I DSM104440_RS02495 PF00591 Glycosyl transferase family, a/b domain DSM104440_RS02495 PF02885 Glycosyl transferase family, helical bundle domain DSM104440_RS02500 PF00218 Indole-3-glycerol phosphate synthase DSM104440_RS02505 PF00267 Gram-negative porin DSM104440_RS02510 PF03232 Ubiquinone biosynthesis protein COQ7 DSM104440_RS02515 PF02566 OsmC-like protein DSM104440_RS02520 PF01594 AI-2E family transporter DSM104440_RS02525 PF00572 Ribosomal protein L13 DSM104440_RS02530 PF00380 Ribosomal protein S9/S16 DSM104440_RS02535 PF01118 Semialdehyde dehydrogenase, NAD binding domain DSM104440_RS02535 PF02774 Semialdehyde dehydrogenase, dimerisation domain DSM104440_RS02550 PF01521 Iron-sulphur cluster biosynthesis DSM104440_RS02555 PF03702 Anhydro-N-acetylmuramic acid kinase DSM104440_RS02560 PF01551 Peptidase family M23 DSM104440_RS02565 PF01479 S4 domain DSM104440_RS02565 PF00579 tRNA synthetases class I (W and Y) DSM104440_RS02595 PF03795 YCII-related domain DSM104440_RS02600 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS02620 PF11940 Domain of unknown function (DUF3458) Ig-like fold DSM104440_RS02620 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DSM104440_RS02620 PF01433 Peptidase family M1 domain DSM104440_RS02625 PF00271 Helicase conserved C-terminal domain DSM104440_RS02625 PF00270 DEAD/DEAH box helicase DSM104440_RS02630 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02635 PF03466 LysR substrate binding domain DSM104440_RS02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS02640 PF14537 Cytochrome c3 DSM104440_RS02640 PF00890 FAD binding domain DSM104440_RS02650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS02655 PF00596 Class II Aldolase and Adducin N-terminal domain DSM104440_RS02675 PF17755 UvrA DNA-binding domain DSM104440_RS02675 PF00005 ABC transporter DSM104440_RS02675 PF17760 UvrA interaction domain DSM104440_RS02685 PF01274 Malate synthase DSM104440_RS02690 PF00463 Isocitrate lyase family DSM104440_RS02695 PF03466 LysR substrate binding domain DSM104440_RS02695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS02710 PF01593 Flavin containing amine oxidoreductase DSM104440_RS02745 PF02607 B12 binding domain DSM104440_RS02745 PF02310 B12 binding domain DSM104440_RS02745 PF13411 MerR HTH family regulatory protein DSM104440_RS02750 PF01266 FAD dependent oxidoreductase DSM104440_RS02750 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DSM104440_RS02755 PF00085 Thioredoxin DSM104440_RS02780 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02785 PF01557 Fumarylacetoacetate (FAA) hydrolase family DSM104440_RS02795 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS02800 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS02800 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSM104440_RS02810 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02835 PF05231 MASE1 DSM104440_RS02835 PF13426 PAS domain DSM104440_RS02835 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS02835 PF08448 PAS fold DSM104440_RS02835 PF00563 EAL domain DSM104440_RS02835 PF08447 PAS fold DSM104440_RS02840 PF00005 ABC transporter DSM104440_RS02850 PF08281 Sigma-70, region 4 DSM104440_RS02850 PF04542 Sigma-70 region 2 DSM104440_RS02865 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02880 PF04134 Protein of unknown function, DUF393 DSM104440_RS02890 PF00202 Aminotransferase class-III DSM104440_RS02925 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS02930 PF00920 Dehydratase family DSM104440_RS02935 PF01070 FMN-dependent dehydrogenase DSM104440_RS02940 PF12848 ABC transporter DSM104440_RS02940 PF00005 ABC transporter DSM104440_RS02945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS02970 PF00149 Calcineurin-like phosphoesterase DSM104440_RS02985 PF07043 Protein of unknown function (DUF1328) DSM104440_RS03005 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DSM104440_RS03010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS03015 PF00873 AcrB/AcrD/AcrF family DSM104440_RS03020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS03025 PF02469 Fasciclin domain DSM104440_RS03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS03030 PF03466 LysR substrate binding domain DSM104440_RS03035 PF03741 Integral membrane protein TerC family DSM104440_RS03040 PF06123 Inner membrane protein CreD DSM104440_RS03050 PF02666 Phosphatidylserine decarboxylase DSM104440_RS03060 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS03060 PF00072 Response regulator receiver domain DSM104440_RS03070 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSM104440_RS03070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DSM104440_RS03100 PF01556 DnaJ C terminal domain DSM104440_RS03100 PF00226 DnaJ domain DSM104440_RS03100 PF00684 DnaJ central domain DSM104440_RS03115 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DSM104440_RS03125 PF03572 Peptidase family S41 DSM104440_RS03125 PF01471 Putative peptidoglycan binding domain DSM104440_RS03125 PF17820 PDZ domain DSM104440_RS03145 PF03309 Type III pantothenate kinase DSM104440_RS03150 PF03099 Biotin/lipoate A/B protein ligase family DSM104440_RS03150 PF02237 Biotin protein ligase C terminal domain DSM104440_RS03150 PF08279 HTH domain DSM104440_RS03165 PF04107 Glutamate-cysteine ligase family 2(GCS2) DSM104440_RS03175 PF03734 L,D-transpeptidase catalytic domain DSM104440_RS03175 PF01476 LysM domain DSM104440_RS03180 PF01565 FAD binding domain DSM104440_RS03180 PF02913 FAD linked oxidases, C-terminal domain DSM104440_RS03185 PF01467 Cytidylyltransferase-like DSM104440_RS03190 PF04972 BON domain DSM104440_RS03195 PF13580 SIS domain DSM104440_RS03200 PF02021 Uncharacterised protein family UPF0102 DSM104440_RS03205 PF04348 LppC putative lipoprotein DSM104440_RS03210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSM104440_RS03215 PF01979 Amidohydrolase family DSM104440_RS03295 PF02381 MraZ protein, putative antitoxin-like DSM104440_RS03300 PF01795 MraW methylase family DSM104440_RS03305 PF04999 Cell division protein FtsL DSM104440_RS03310 PF03717 Penicillin-binding Protein dimerisation domain DSM104440_RS03310 PF00905 Penicillin binding protein transpeptidase domain DSM104440_RS03315 PF08245 Mur ligase middle domain DSM104440_RS03315 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS03315 PF01225 Mur ligase family, catalytic domain DSM104440_RS03320 PF01225 Mur ligase family, catalytic domain DSM104440_RS03320 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS03320 PF08245 Mur ligase middle domain DSM104440_RS03325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DSM104440_RS03325 PF00953 Glycosyl transferase family 4 DSM104440_RS03330 PF08245 Mur ligase middle domain DSM104440_RS03330 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS03335 PF01098 Cell cycle protein DSM104440_RS03340 PF04101 Glycosyltransferase family 28 C-terminal domain DSM104440_RS03340 PF03033 Glycosyltransferase family 28 N-terminal domain DSM104440_RS03345 PF01225 Mur ligase family, catalytic domain DSM104440_RS03345 PF08245 Mur ligase middle domain DSM104440_RS03345 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS03350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DSM104440_RS03350 PF01565 FAD binding domain DSM104440_RS03355 PF01820 D-ala D-ala ligase N-terminus DSM104440_RS03355 PF07478 D-ala D-ala ligase C-terminus DSM104440_RS03360 PF08478 POTRA domain, FtsQ-type DSM104440_RS03360 PF03799 Cell division protein FtsQ DSM104440_RS03365 PF02491 SHS2 domain inserted in FTSA DSM104440_RS03370 PF00091 Tubulin/FtsZ family, GTPase domain DSM104440_RS03370 PF12327 FtsZ family, C-terminal domain DSM104440_RS03375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DSM104440_RS03390 PF01551 Peptidase family M23 DSM104440_RS03395 PF07517 SecA DEAD-like domain DSM104440_RS03395 PF02810 SEC-C motif DSM104440_RS03395 PF07516 SecA Wing and Scaffold domain DSM104440_RS03395 PF01043 SecA preprotein cross-linking domain DSM104440_RS03400 PF01960 ArgJ family DSM104440_RS03405 PF01209 ubiE/COQ5 methyltransferase family DSM104440_RS03415 PF00293 NUDIX domain DSM104440_RS03420 PF02560 Cyanate lyase C-terminal domain DSM104440_RS03425 PF00005 ABC transporter DSM104440_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS03440 PF13419 Haloacid dehalogenase-like hydrolase DSM104440_RS03450 PF08241 Methyltransferase domain DSM104440_RS03455 PF00561 alpha/beta hydrolase fold DSM104440_RS03460 PF00155 Aminotransferase class I and II DSM104440_RS03465 PF06968 Biotin and Thiamin Synthesis associated domain DSM104440_RS03465 PF04055 Radical SAM superfamily DSM104440_RS03470 PF00156 Phosphoribosyl transferase domain DSM104440_RS03475 PF00588 SpoU rRNA Methylase family DSM104440_RS03530 PF00577 Outer membrane usher protein DSM104440_RS03530 PF13954 PapC N-terminal domain DSM104440_RS03530 PF13953 PapC C-terminal domain DSM104440_RS03540 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DSM104440_RS03540 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DSM104440_RS03550 PF02556 Preprotein translocase subunit SecB DSM104440_RS03555 PF00462 Glutaredoxin DSM104440_RS03560 PF00581 Rhodanese-like domain DSM104440_RS03575 PF00300 Histidine phosphatase superfamily (branch 1) DSM104440_RS03580 PF01551 Peptidase family M23 DSM104440_RS03585 PF13180 PDZ domain DSM104440_RS03585 PF03572 Peptidase family S41 DSM104440_RS03590 PF00899 ThiF family DSM104440_RS03610 PF00814 Glycoprotease family DSM104440_RS03615 PF01165 Ribosomal protein S21 DSM104440_RS03620 PF09424 Yqey-like protein DSM104440_RS03625 PF10410 DnaB-helicase binding domain of primase DSM104440_RS03625 PF08275 DNA primase catalytic core, N-terminal domain DSM104440_RS03625 PF08278 DNA primase DnaG DnaB-binding DSM104440_RS03625 PF01807 CHC2 zinc finger DSM104440_RS03630 PF04546 Sigma-70, non-essential region DSM104440_RS03630 PF00140 Sigma-70 factor, region 1.2 DSM104440_RS03630 PF04542 Sigma-70 region 2 DSM104440_RS03630 PF04539 Sigma-70 region 3 DSM104440_RS03630 PF04545 Sigma-70, region 4 DSM104440_RS03630 PF03979 Sigma-70 factor, region 1.1 DSM104440_RS03635 PF07885 Ion channel DSM104440_RS03635 PF00027 Cyclic nucleotide-binding domain DSM104440_RS03650 PF00069 Protein kinase domain DSM104440_RS03660 PF13380 CoA binding domain DSM104440_RS03670 PF16200 C-terminal region of band_7 DSM104440_RS03670 PF01145 SPFH domain / Band 7 family DSM104440_RS03675 PF01053 Cys/Met metabolism PLP-dependent enzyme DSM104440_RS03685 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS03690 PF01522 Polysaccharide deacetylase DSM104440_RS03700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS03700 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS03700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS03700 PF09317 Domain of unknown function (DUF1974) DSM104440_RS03705 PF02803 Thiolase, C-terminal domain DSM104440_RS03705 PF00108 Thiolase, N-terminal domain DSM104440_RS03715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSM104440_RS03715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSM104440_RS03715 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS03735 PF00501 AMP-binding enzyme DSM104440_RS03740 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS03745 PF00107 Zinc-binding dehydrogenase DSM104440_RS03745 PF16884 N-terminal domain of oxidoreductase DSM104440_RS03750 PF03061 Thioesterase superfamily DSM104440_RS03755 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSM104440_RS03755 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSM104440_RS03755 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS03765 PF02803 Thiolase, C-terminal domain DSM104440_RS03765 PF00108 Thiolase, N-terminal domain DSM104440_RS03775 PF07044 Protein of unknown function (DUF1329) DSM104440_RS03810 PF08534 Redoxin DSM104440_RS03815 PF01810 LysE type translocator DSM104440_RS03820 PF00106 short chain dehydrogenase DSM104440_RS03825 PF00817 impB/mucB/samB family DSM104440_RS03825 PF11799 impB/mucB/samB family C-terminal domain DSM104440_RS03825 PF11798 IMS family HHH motif DSM104440_RS03835 PF13185 GAF domain DSM104440_RS03845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DSM104440_RS03845 PF00326 Prolyl oligopeptidase family DSM104440_RS03870 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) DSM104440_RS03880 PF02203 Tar ligand binding domain homologue DSM104440_RS03880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS03880 PF00672 HAMP domain DSM104440_RS03900 PF01268 Formate--tetrahydrofolate ligase DSM104440_RS03905 PF00069 Protein kinase domain DSM104440_RS03905 PF03793 PASTA domain DSM104440_RS03915 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSM104440_RS03915 PF00072 Response regulator receiver domain DSM104440_RS03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS03915 PF01627 Hpt domain DSM104440_RS03915 PF00672 HAMP domain DSM104440_RS03915 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS03920 PF00989 PAS fold DSM104440_RS03920 PF16736 Single Cache-like DSM104440_RS03920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS03920 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS03930 PF00072 Response regulator receiver domain DSM104440_RS03935 PF01565 FAD binding domain DSM104440_RS03935 PF02913 FAD linked oxidases, C-terminal domain DSM104440_RS03940 PF02913 FAD linked oxidases, C-terminal domain DSM104440_RS03940 PF01565 FAD binding domain DSM104440_RS03945 PF01565 FAD binding domain DSM104440_RS03950 PF02754 Cysteine-rich domain DSM104440_RS03950 PF13183 4Fe-4S dicluster domain DSM104440_RS03960 PF01197 Ribosomal protein L31 DSM104440_RS03970 PF07497 Rho termination factor, RNA-binding domain DSM104440_RS03970 PF07498 Rho termination factor, N-terminal domain DSM104440_RS03970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSM104440_RS03975 PF00085 Thioredoxin DSM104440_RS03980 PF11953 Domain of unknown function (DUF3470) DSM104440_RS03980 PF00037 4Fe-4S binding domain DSM104440_RS03990 PF00360 Phytochrome region DSM104440_RS03990 PF01590 GAF domain DSM104440_RS03990 PF08446 PAS fold DSM104440_RS03990 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS03995 PF00072 Response regulator receiver domain DSM104440_RS04000 PF00563 EAL domain DSM104440_RS04000 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS04000 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS04005 PF02322 Cytochrome bd terminal oxidase subunit II DSM104440_RS04010 PF01654 Cytochrome bd terminal oxidase subunit I DSM104440_RS04020 PF12705 PD-(D/E)XK nuclease superfamily DSM104440_RS04020 PF00580 UvrD/REP helicase N-terminal domain DSM104440_RS04020 PF13361 UvrD-like helicase C-terminal domain DSM104440_RS04035 PF00005 ABC transporter DSM104440_RS04045 PF00561 alpha/beta hydrolase fold DSM104440_RS04050 PF04337 Protein of unknown function, DUF480 DSM104440_RS04075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS04075 PF03466 LysR substrate binding domain DSM104440_RS04080 PF01636 Phosphotransferase enzyme family DSM104440_RS04105 PF07729 FCD domain DSM104440_RS04105 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS04110 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS04130 PF00692 dUTPase DSM104440_RS04135 PF04127 DNA / pantothenate metabolism flavoprotein DSM104440_RS04135 PF02441 Flavoprotein DSM104440_RS04140 PF04002 RadC-like JAB domain DSM104440_RS04145 PF00830 Ribosomal L28 family DSM104440_RS04150 PF00471 Ribosomal protein L33 DSM104440_RS04155 PF12849 PBP superfamily domain DSM104440_RS04160 PF02203 Tar ligand binding domain homologue DSM104440_RS04160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS04160 PF00672 HAMP domain DSM104440_RS04175 PF12795 Mechanosensitive ion channel porin domain DSM104440_RS04175 PF00924 Mechanosensitive ion channel DSM104440_RS04175 PF12794 Mechanosensitive ion channel inner membrane domain 1 DSM104440_RS04180 PF01029 NusB family DSM104440_RS04180 PF01189 16S rRNA methyltransferase RsmB/F DSM104440_RS04190 PF00551 Formyl transferase DSM104440_RS04195 PF02769 AIR synthase related protein, C-terminal domain DSM104440_RS04195 PF00586 AIR synthase related protein, N-terminal domain DSM104440_RS04200 PF02445 Quinolinate synthetase A protein DSM104440_RS04205 PF08299 Bacterial dnaA protein helix-turn-helix DSM104440_RS04205 PF00308 Bacterial dnaA protein DSM104440_RS04215 PF12627 Probable RNA and SrmB- binding site of polymerase A DSM104440_RS04215 PF12626 Polymerase A arginine-rich C-terminus DSM104440_RS04215 PF01743 Poly A polymerase head domain DSM104440_RS04220 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DSM104440_RS04225 PF01712 Deoxynucleoside kinase DSM104440_RS04230 PF02548 Ketopantoate hydroxymethyltransferase DSM104440_RS04235 PF02569 Pantoate-beta-alanine ligase DSM104440_RS04240 PF02261 Aspartate decarboxylase DSM104440_RS04245 PF01738 Dienelactone hydrolase family DSM104440_RS04250 PF00701 Dihydrodipicolinate synthetase family DSM104440_RS04265 PF04397 LytTr DNA-binding domain DSM104440_RS04265 PF00072 Response regulator receiver domain DSM104440_RS04280 PF07883 Cupin domain DSM104440_RS04285 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DSM104440_RS04295 PF01546 Peptidase family M20/M25/M40 DSM104440_RS04295 PF07687 Peptidase dimerisation domain DSM104440_RS04300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSM104440_RS04305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSM104440_RS04305 PF04324 BFD-like [2Fe-2S] binding domain DSM104440_RS04305 PF01568 Molydopterin dinucleotide binding domain DSM104440_RS04305 PF00384 Molybdopterin oxidoreductase DSM104440_RS04310 PF00355 Rieske [2Fe-2S] domain DSM104440_RS04315 PF04324 BFD-like [2Fe-2S] binding domain DSM104440_RS04315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DSM104440_RS04315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DSM104440_RS04315 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS04315 PF18267 Rubredoxin NAD+ reductase C-terminal domain DSM104440_RS04320 PF00005 ABC transporter DSM104440_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS04335 PF08376 Nitrate and nitrite sensing DSM104440_RS04335 PF03861 ANTAR domain DSM104440_RS04345 PF03412 Peptidase C39 family DSM104440_RS04345 PF00005 ABC transporter DSM104440_RS04345 PF00664 ABC transporter transmembrane region DSM104440_RS04350 PF00664 ABC transporter transmembrane region DSM104440_RS04350 PF03412 Peptidase C39 family DSM104440_RS04350 PF00005 ABC transporter DSM104440_RS04380 PF01418 Helix-turn-helix domain, rpiR family DSM104440_RS04380 PF01380 SIS domain DSM104440_RS04380 PF02685 Glucokinase DSM104440_RS04385 PF00593 TonB dependent receptor DSM104440_RS04385 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS04390 PF00356 Bacterial regulatory proteins, lacI family DSM104440_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS04405 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS04410 PF00232 Glycosyl hydrolase family 1 DSM104440_RS04415 PF02547 Queuosine biosynthesis protein DSM104440_RS04430 PF03466 LysR substrate binding domain DSM104440_RS04430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS04440 PF02358 Trehalose-phosphatase DSM104440_RS04445 PF00982 Glycosyltransferase family 20 DSM104440_RS04455 PF00719 Inorganic pyrophosphatase DSM104440_RS04470 PF12704 MacB-like periplasmic core domain DSM104440_RS04470 PF00005 ABC transporter DSM104440_RS04470 PF02687 FtsX-like permease family DSM104440_RS04490 PF13443 Cro/C1-type HTH DNA-binding domain DSM104440_RS04505 PF00892 EamA-like transporter family DSM104440_RS04530 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DSM104440_RS04530 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DSM104440_RS04530 PF02769 AIR synthase related protein, C-terminal domain DSM104440_RS04575 PF01722 BolA-like protein DSM104440_RS04580 PF04279 Intracellular septation protein A DSM104440_RS04590 PF02811 PHP domain DSM104440_RS04595 PF01300 Telomere recombination DSM104440_RS04600 PF02163 Peptidase family M50 DSM104440_RS04605 PF00579 tRNA synthetases class I (W and Y) DSM104440_RS04615 PF02616 Segregation and condensation protein ScpA DSM104440_RS04620 PF04079 Segregation and condensation complex subunit ScpB DSM104440_RS04625 PF01479 S4 domain DSM104440_RS04625 PF00849 RNA pseudouridylate synthase DSM104440_RS04635 PF03466 LysR substrate binding domain DSM104440_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS04650 PF00857 Isochorismatase family DSM104440_RS04660 PF03795 YCII-related domain DSM104440_RS04670 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DSM104440_RS04670 PF01243 Pyridoxamine 5'-phosphate oxidase DSM104440_RS04675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS04680 PF00596 Class II Aldolase and Adducin N-terminal domain DSM104440_RS04695 PF05175 Methyltransferase small domain DSM104440_RS04700 PF01546 Peptidase family M20/M25/M40 DSM104440_RS04700 PF07687 Peptidase dimerisation domain DSM104440_RS04715 PF00437 Type II/IV secretion system protein DSM104440_RS04720 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS04720 PF14602 Hexapeptide repeat of succinyl-transferase DSM104440_RS04720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DSM104440_RS04725 PF00155 Aminotransferase class I and II DSM104440_RS04730 PF08241 Methyltransferase domain DSM104440_RS04735 PF00535 Glycosyl transferase family 2 DSM104440_RS04745 PF14489 QueF-like protein DSM104440_RS04750 PF08241 Methyltransferase domain DSM104440_RS04755 PF06470 SMC proteins Flexible Hinge Domain DSM104440_RS04755 PF02463 RecF/RecN/SMC N terminal domain DSM104440_RS04765 PF00533 BRCA1 C Terminus (BRCT) domain DSM104440_RS04765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DSM104440_RS04765 PF03120 NAD-dependent DNA ligase OB-fold domain DSM104440_RS04765 PF01653 NAD-dependent DNA ligase adenylation domain DSM104440_RS04765 PF12826 Helix-hairpin-helix motif DSM104440_RS04770 PF00483 Nucleotidyl transferase DSM104440_RS04775 PF00156 Phosphoribosyl transferase domain DSM104440_RS04780 PF01048 Phosphorylase superfamily DSM104440_RS04785 PF01327 Polypeptide deformylase DSM104440_RS04805 PF08335 GlnD PII-uridylyltransferase DSM104440_RS04805 PF01966 HD domain DSM104440_RS04805 PF01909 Nucleotidyltransferase domain DSM104440_RS04810 PF00557 Metallopeptidase family M24 DSM104440_RS04815 PF00318 Ribosomal protein S2 DSM104440_RS04820 PF00889 Elongation factor TS DSM104440_RS04825 PF00696 Amino acid kinase family DSM104440_RS04830 PF01765 Ribosome recycling factor DSM104440_RS04835 PF01255 Putative undecaprenyl diphosphate synthase DSM104440_RS04845 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DSM104440_RS04845 PF13288 DXP reductoisomerase C-terminal domain DSM104440_RS04845 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DSM104440_RS04850 PF13180 PDZ domain DSM104440_RS04850 PF17820 PDZ domain DSM104440_RS04850 PF02163 Peptidase family M50 DSM104440_RS04855 PF01103 Surface antigen DSM104440_RS04855 PF07244 Surface antigen variable number repeat DSM104440_RS04865 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS04865 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DSM104440_RS04870 PF07977 FabA-like domain DSM104440_RS04875 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DSM104440_RS04875 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS04880 PF02684 Lipid-A-disaccharide synthetase DSM104440_RS04885 PF01351 Ribonuclease HII DSM104440_RS04890 PF00588 SpoU rRNA Methylase family DSM104440_RS04890 PF08032 RNA 2'-O ribose methyltransferase substrate binding DSM104440_RS04905 PF01734 Patatin-like phospholipase DSM104440_RS04915 PF03797 Autotransporter beta-domain DSM104440_RS04915 PF00657 GDSL-like Lipase/Acylhydrolase DSM104440_RS04920 PF03618 Kinase/pyrophosphorylase DSM104440_RS04925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DSM104440_RS04925 PF00391 PEP-utilising enzyme, mobile domain DSM104440_RS04925 PF02896 PEP-utilising enzyme, TIM barrel domain DSM104440_RS04930 PF13673 Acetyltransferase (GNAT) domain DSM104440_RS04945 PF01470 Pyroglutamyl peptidase DSM104440_RS04950 PF00501 AMP-binding enzyme DSM104440_RS04950 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS04955 PF16916 Dimerisation domain of Zinc Transporter DSM104440_RS04955 PF01545 Cation efflux family DSM104440_RS04960 PF00403 Heavy-metal-associated domain DSM104440_RS04965 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DSM104440_RS04965 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS04965 PF10996 Beta-Casp domain DSM104440_RS04980 PF03109 ABC1 family DSM104440_RS04995 PF00850 Histone deacetylase domain DSM104440_RS05015 PF00873 AcrB/AcrD/AcrF family DSM104440_RS05020 PF00690 Cation transporter/ATPase, N-terminus DSM104440_RS05020 PF00689 Cation transporting ATPase, C-terminus DSM104440_RS05035 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS05045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS05050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DSM104440_RS05055 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS05060 PF13183 4Fe-4S dicluster domain DSM104440_RS05060 PF13085 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS05065 PF02910 Fumarate reductase flavoprotein C-term DSM104440_RS05065 PF00890 FAD binding domain DSM104440_RS05070 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DSM104440_RS05075 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DSM104440_RS05080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DSM104440_RS05080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DSM104440_RS05085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS05090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS05090 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DSM104440_RS05095 PF03949 Malic enzyme, NAD binding domain DSM104440_RS05095 PF00390 Malic enzyme, N-terminal domain DSM104440_RS05125 PF00361 Proton-conducting membrane transporter DSM104440_RS05130 PF00361 Proton-conducting membrane transporter DSM104440_RS05130 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DSM104440_RS05135 PF00361 Proton-conducting membrane transporter DSM104440_RS05135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DSM104440_RS05140 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DSM104440_RS05145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DSM104440_RS05150 PF00037 4Fe-4S binding domain DSM104440_RS05155 PF00146 NADH dehydrogenase DSM104440_RS05160 PF00384 Molybdopterin oxidoreductase DSM104440_RS05160 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DSM104440_RS05160 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DSM104440_RS05165 PF10531 SLBB domain DSM104440_RS05165 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSM104440_RS05165 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSM104440_RS05175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DSM104440_RS05180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DSM104440_RS05185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSM104440_RS05190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DSM104440_RS05200 PF12697 Alpha/beta hydrolase family DSM104440_RS05205 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSM104440_RS05220 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DSM104440_RS05220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSM104440_RS05225 PF12801 4Fe-4S binding domain DSM104440_RS05225 PF13746 4Fe-4S dicluster domain DSM104440_RS05225 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DSM104440_RS05245 PF00583 Acetyltransferase (GNAT) family DSM104440_RS05245 PF13380 CoA binding domain DSM104440_RS05245 PF13607 Succinyl-CoA ligase like flavodoxin domain DSM104440_RS05265 PF00582 Universal stress protein family DSM104440_RS05270 PF00582 Universal stress protein family DSM104440_RS05275 PF13545 Crp-like helix-turn-helix domain DSM104440_RS05275 PF00027 Cyclic nucleotide-binding domain DSM104440_RS05280 PF00072 Response regulator receiver domain DSM104440_RS05280 PF01339 CheB methylesterase DSM104440_RS05285 PF00072 Response regulator receiver domain DSM104440_RS05285 PF00196 Bacterial regulatory proteins, luxR family DSM104440_RS05290 PF17200 Single Cache domain 2 DSM104440_RS05290 PF07730 Histidine kinase DSM104440_RS05295 PF06969 HemN C-terminal domain DSM104440_RS05295 PF04055 Radical SAM superfamily DSM104440_RS05315 PF02867 Ribonucleotide reductase, barrel domain DSM104440_RS05315 PF03477 ATP cone domain DSM104440_RS05315 PF00317 Ribonucleotide reductase, all-alpha domain DSM104440_RS05330 PF03060 Nitronate monooxygenase DSM104440_RS05340 PF00325 Bacterial regulatory proteins, crp family DSM104440_RS05340 PF00027 Cyclic nucleotide-binding domain DSM104440_RS05350 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSM104440_RS05360 PF00175 Oxidoreductase NAD-binding domain DSM104440_RS05360 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS05360 PF00970 Oxidoreductase FAD-binding domain DSM104440_RS05370 PF01040 UbiA prenyltransferase family DSM104440_RS05375 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSM104440_RS05395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSM104440_RS05405 PF00034 Cytochrome c DSM104440_RS05410 PF00027 Cyclic nucleotide-binding domain DSM104440_RS05410 PF00520 Ion transport protein DSM104440_RS05415 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS05415 PF00593 TonB dependent receptor DSM104440_RS05425 PF03006 Haemolysin-III related DSM104440_RS05430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS05430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSM104440_RS05430 PF00205 Thiamine pyrophosphate enzyme, central domain DSM104440_RS05435 PF02036 SCP-2 sterol transfer family DSM104440_RS05440 PF01136 Peptidase family U32 DSM104440_RS05445 PF01136 Peptidase family U32 DSM104440_RS05450 PF04304 Protein of unknown function (DUF454) DSM104440_RS05455 PF02082 Transcriptional regulator DSM104440_RS05460 PF00115 Cytochrome C and Quinol oxidase polypeptide I DSM104440_RS05470 PF01883 Iron-sulfur cluster assembly protein DSM104440_RS05475 PF03264 NapC/NirT cytochrome c family, N-terminal region DSM104440_RS05480 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DSM104440_RS05485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSM104440_RS05485 PF00384 Molybdopterin oxidoreductase DSM104440_RS05485 PF01568 Molydopterin dinucleotide binding domain DSM104440_RS05490 PF03927 NapD protein DSM104440_RS05500 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS05515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSM104440_RS05515 PF00437 Type II/IV secretion system protein DSM104440_RS05520 PF01804 Penicillin amidase DSM104440_RS05565 PF05958 tRNA (Uracil-5-)-methyltransferase DSM104440_RS05565 PF01938 TRAM domain DSM104440_RS05570 PF01027 Inhibitor of apoptosis-promoting Bax1 DSM104440_RS05595 PF08448 PAS fold DSM104440_RS05595 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS05595 PF08447 PAS fold DSM104440_RS05595 PF00563 EAL domain DSM104440_RS05600 PF00696 Amino acid kinase family DSM104440_RS05600 PF13840 ACT domain DSM104440_RS05600 PF01842 ACT domain DSM104440_RS05605 PF00326 Prolyl oligopeptidase family DSM104440_RS05605 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DSM104440_RS05625 PF00072 Response regulator receiver domain DSM104440_RS05630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS05630 PF13426 PAS domain DSM104440_RS05630 PF00072 Response regulator receiver domain DSM104440_RS05635 PF18029 Glyoxalase-like domain DSM104440_RS05665 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS05665 PF00593 TonB dependent receptor DSM104440_RS05675 PF01645 Conserved region in glutamate synthase DSM104440_RS05690 PF03616 Sodium/glutamate symporter DSM104440_RS05710 PF02080 TrkA-C domain DSM104440_RS05710 PF06826 Predicted Permease Membrane Region DSM104440_RS05715 PF01276 Orn/Lys/Arg decarboxylase, major domain DSM104440_RS05715 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DSM104440_RS05715 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DSM104440_RS05720 PF02628 Cytochrome oxidase assembly protein DSM104440_RS05745 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS05755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DSM104440_RS05755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DSM104440_RS05760 PF00294 pfkB family carbohydrate kinase DSM104440_RS05765 PF01418 Helix-turn-helix domain, rpiR family DSM104440_RS05765 PF01380 SIS domain DSM104440_RS05775 PF00005 ABC transporter DSM104440_RS05780 PF00005 ABC transporter DSM104440_RS05785 PF12848 ABC transporter DSM104440_RS05785 PF00005 ABC transporter DSM104440_RS05810 PF02743 Cache domain DSM104440_RS05810 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS05810 PF00672 HAMP domain DSM104440_RS05825 PF01914 MarC family integral membrane protein DSM104440_RS05830 PF00171 Aldehyde dehydrogenase family DSM104440_RS05835 PF07722 Peptidase C26 DSM104440_RS05840 PF06974 Protein of unknown function (DUF1298) DSM104440_RS05840 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DSM104440_RS05850 PF12697 Alpha/beta hydrolase family DSM104440_RS05855 PF04960 Glutaminase DSM104440_RS05860 PF10005 zinc-ribbon domain DSM104440_RS05860 PF15887 Putative zinc-binding metallo-peptidase DSM104440_RS05865 PF00465 Iron-containing alcohol dehydrogenase DSM104440_RS05870 PF01979 Amidohydrolase family DSM104440_RS05875 PF00120 Glutamine synthetase, catalytic domain DSM104440_RS05875 PF03951 Glutamine synthetase, beta-Grasp domain DSM104440_RS05885 PF01812 5-formyltetrahydrofolate cyclo-ligase family DSM104440_RS05890 PF00005 ABC transporter DSM104440_RS05895 PF00005 ABC transporter DSM104440_RS05905 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS05915 PF06114 IrrE N-terminal-like domain DSM104440_RS05915 PF01381 Helix-turn-helix DSM104440_RS05915 PF09856 Predicted transcriptional regulator (DUF2083) DSM104440_RS05920 PF00072 Response regulator receiver domain DSM104440_RS05920 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS05930 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS05930 PF16736 Single Cache-like DSM104440_RS05930 PF00989 PAS fold DSM104440_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS05935 PF01966 HD domain DSM104440_RS05940 PF02690 Na+/Pi-cotransporter DSM104440_RS05945 PF00171 Aldehyde dehydrogenase family DSM104440_RS05950 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DSM104440_RS05955 PF07729 FCD domain DSM104440_RS05955 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS05965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS05975 PF00465 Iron-containing alcohol dehydrogenase DSM104440_RS05980 PF03466 LysR substrate binding domain DSM104440_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS05990 PF00005 ABC transporter DSM104440_RS05995 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS06000 PF00266 Aminotransferase class-V DSM104440_RS06005 PF03928 Haem-degrading DSM104440_RS06015 PF08241 Methyltransferase domain DSM104440_RS06020 PF00701 Dihydrodipicolinate synthetase family DSM104440_RS06025 PF06804 NlpB/DapX lipoprotein DSM104440_RS06030 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS06030 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSM104440_RS06045 PF08007 Cupin superfamily protein DSM104440_RS06050 PF00578 AhpC/TSA family DSM104440_RS06055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSM104440_RS06065 PF05192 MutS domain III DSM104440_RS06065 PF00488 MutS domain V DSM104440_RS06065 PF05190 MutS family domain IV DSM104440_RS06065 PF05188 MutS domain II DSM104440_RS06065 PF01624 MutS domain I DSM104440_RS06075 PF04972 BON domain DSM104440_RS06075 PF01476 LysM domain DSM104440_RS06085 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS06090 PF00588 SpoU rRNA Methylase family DSM104440_RS06100 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS06100 PF06426 Serine acetyltransferase, N-terminal DSM104440_RS06105 PF02082 Transcriptional regulator DSM104440_RS06110 PF00266 Aminotransferase class-V DSM104440_RS06115 PF01592 NifU-like N terminal domain DSM104440_RS06120 PF01521 Iron-sulphur cluster biosynthesis DSM104440_RS06125 PF00226 DnaJ domain DSM104440_RS06125 PF07743 HSCB C-terminal oligomerisation domain DSM104440_RS06130 PF00012 Hsp70 protein DSM104440_RS06135 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS06140 PF04384 Iron-sulphur cluster assembly DSM104440_RS06145 PF13458 Periplasmic binding protein DSM104440_RS06155 PF00158 Sigma-54 interaction domain DSM104440_RS06155 PF00072 Response regulator receiver domain DSM104440_RS06165 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS06180 PF02559 CarD-like/TRCF domain DSM104440_RS06180 PF00270 DEAD/DEAH box helicase DSM104440_RS06180 PF00271 Helicase conserved C-terminal domain DSM104440_RS06180 PF17757 UvrB interaction domain DSM104440_RS06180 PF03461 TRCF domain DSM104440_RS06185 PF05683 Fumarase C-terminus DSM104440_RS06185 PF05681 Fumarate hydratase (Fumerase) DSM104440_RS06190 PF03350 Uncharacterized protein family, UPF0114 DSM104440_RS06200 PF00501 AMP-binding enzyme DSM104440_RS06200 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS06210 PF00501 AMP-binding enzyme DSM104440_RS06210 PF16177 Acetyl-coenzyme A synthetase N-terminus DSM104440_RS06210 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS06220 PF18698 Histidine kinase sensor domain DSM104440_RS06220 PF00672 HAMP domain DSM104440_RS06220 PF00989 PAS fold DSM104440_RS06220 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS06225 PF00072 Response regulator receiver domain DSM104440_RS06225 PF00196 Bacterial regulatory proteins, luxR family DSM104440_RS06245 PF00474 Sodium:solute symporter family DSM104440_RS06260 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS06260 PF00072 Response regulator receiver domain DSM104440_RS06290 PF00205 Thiamine pyrophosphate enzyme, central domain DSM104440_RS06290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS06290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSM104440_RS06295 PF10369 Small subunit of acetolactate synthase DSM104440_RS06300 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DSM104440_RS06300 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DSM104440_RS06305 PF02666 Phosphatidylserine decarboxylase DSM104440_RS06310 PF01066 CDP-alcohol phosphatidyltransferase DSM104440_RS06315 PF00682 HMGL-like DSM104440_RS06315 PF08502 LeuA allosteric (dimerisation) domain DSM104440_RS06325 PF00248 Aldo/keto reductase family DSM104440_RS06335 PF08328 Adenylosuccinate lyase C-terminal DSM104440_RS06335 PF00206 Lyase DSM104440_RS06340 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS06340 PF13417 Glutathione S-transferase, N-terminal domain DSM104440_RS06355 PF00849 RNA pseudouridylate synthase DSM104440_RS06360 PF00180 Isocitrate/isopropylmalate dehydrogenase DSM104440_RS06365 PF00313 'Cold-shock' DNA-binding domain DSM104440_RS06370 PF02617 ATP-dependent Clp protease adaptor protein ClpS DSM104440_RS06375 PF17871 AAA lid domain DSM104440_RS06375 PF07724 AAA domain (Cdc48 subfamily) DSM104440_RS06375 PF02861 Clp amino terminal domain, pathogenicity island component DSM104440_RS06375 PF10431 C-terminal, D2-small domain, of ClpB protein DSM104440_RS06375 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS06380 PF00034 Cytochrome c DSM104440_RS06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS06385 PF10518 TAT (twin-arginine translocation) pathway signal sequence DSM104440_RS06385 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding DSM104440_RS06390 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSM104440_RS06390 PF02142 MGS-like domain DSM104440_RS06390 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DSM104440_RS06395 PF13302 Acetyltransferase (GNAT) domain DSM104440_RS06400 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS06405 PF05872 Bacterial protein of unknown function (DUF853) DSM104440_RS06410 PF01709 Transcriptional regulator DSM104440_RS06415 PF02075 Crossover junction endodeoxyribonuclease RuvC DSM104440_RS06420 PF01330 RuvA N terminal domain DSM104440_RS06420 PF07499 RuvA, C-terminal domain DSM104440_RS06425 PF17864 RuvB AAA lid domain DSM104440_RS06425 PF05491 RuvB C-terminal winged helix domain DSM104440_RS06425 PF05496 Holliday junction DNA helicase RuvB P-loop domain DSM104440_RS06430 PF03061 Thioesterase superfamily DSM104440_RS06435 PF01618 MotA/TolQ/ExbB proton channel family DSM104440_RS06440 PF02472 Biopolymer transport protein ExbD/TolR DSM104440_RS06450 PF07676 WD40-like Beta Propeller Repeat DSM104440_RS06450 PF04052 TolB amino-terminal domain DSM104440_RS06455 PF00691 OmpA family DSM104440_RS06465 PF06508 Queuosine biosynthesis protein QueC DSM104440_RS06495 PF00186 Dihydrofolate reductase DSM104440_RS06500 PF00303 Thymidylate synthase DSM104440_RS06515 PF00593 TonB dependent receptor DSM104440_RS06515 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS06520 PF02576 RimP N-terminal domain DSM104440_RS06520 PF17384 RimP C-terminal SH3 domain DSM104440_RS06525 PF08529 NusA N-terminal domain DSM104440_RS06525 PF13184 NusA-like KH domain DSM104440_RS06530 PF08364 Bacterial translation initiation factor IF-2 associated region DSM104440_RS06530 PF04760 Translation initiation factor IF-2, N-terminal region DSM104440_RS06530 PF11987 Translation-initiation factor 2 DSM104440_RS06530 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS06535 PF02033 Ribosome-binding factor A DSM104440_RS06540 PF09157 Pseudouridine synthase II TruB, C-terminal DSM104440_RS06540 PF16198 tRNA pseudouridylate synthase B C-terminal domain DSM104440_RS06540 PF01509 TruB family pseudouridylate synthase (N terminal domain) DSM104440_RS06545 PF00312 Ribosomal protein S15 DSM104440_RS06550 PF00013 KH domain DSM104440_RS06550 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DSM104440_RS06550 PF00575 S1 RNA binding domain DSM104440_RS06550 PF03725 3' exoribonuclease family, domain 2 DSM104440_RS06550 PF01138 3' exoribonuclease family, domain 1 DSM104440_RS06570 PF01668 SmpB protein DSM104440_RS06580 PF03658 RnfH family Ubiquitin DSM104440_RS06605 PF00571 CBS domain DSM104440_RS06605 PF00478 IMP dehydrogenase / GMP reductase domain DSM104440_RS06610 PF02540 NAD synthase DSM104440_RS06610 PF00958 GMP synthase C terminal domain DSM104440_RS06610 PF00117 Glutamine amidotransferase class-I DSM104440_RS06615 PF16153 Domain of unknown function (DUF4861) DSM104440_RS06620 PF04909 Amidohydrolase DSM104440_RS06625 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS06630 PF03960 ArsC family DSM104440_RS06635 PF00563 EAL domain DSM104440_RS06635 PF01590 GAF domain DSM104440_RS06635 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS06635 PF00360 Phytochrome region DSM104440_RS06640 PF00072 Response regulator receiver domain DSM104440_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS06640 PF01627 Hpt domain DSM104440_RS06640 PF00989 PAS fold DSM104440_RS06640 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSM104440_RS06640 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS06655 PF00072 Response regulator receiver domain DSM104440_RS06660 PF14437 MafB19-like deaminase DSM104440_RS06665 PF14579 Helix-hairpin-helix motif DSM104440_RS06665 PF02811 PHP domain DSM104440_RS06665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSM104440_RS06665 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSM104440_RS06665 PF01336 OB-fold nucleic acid binding domain DSM104440_RS06670 PF00708 Acylphosphatase DSM104440_RS06675 PF00472 RF-1 domain DSM104440_RS06675 PF03462 PCRF domain DSM104440_RS06685 PF01588 Putative tRNA binding domain DSM104440_RS06685 PF09334 tRNA synthetases class I (M) DSM104440_RS06690 PF10609 NUBPL iron-transfer P-loop NTPase DSM104440_RS06695 PF00692 dUTPase DSM104440_RS06700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DSM104440_RS06700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DSM104440_RS06720 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS06730 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS06735 PF03186 CobD/Cbib protein DSM104440_RS06735 PF17113 Regulatory signalling modulator protein AmpE DSM104440_RS06740 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS06750 PF01970 Tripartite tricarboxylate transporter TctA family DSM104440_RS06755 PF00246 Zinc carboxypeptidase DSM104440_RS06760 PF01875 Memo-like protein DSM104440_RS06765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DSM104440_RS06765 PF01871 AMMECR1 DSM104440_RS06775 PF03193 RsgA GTPase DSM104440_RS06780 PF01329 Pterin 4 alpha carbinolamine dehydratase DSM104440_RS06785 PF01435 Peptidase family M48 DSM104440_RS06785 PF16491 CAAX prenyl protease N-terminal, five membrane helices DSM104440_RS06790 PF00929 Exonuclease DSM104440_RS06800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DSM104440_RS06800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DSM104440_RS06820 PF13416 Bacterial extracellular solute-binding protein DSM104440_RS06825 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS06830 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS06835 PF17912 MalK OB fold domain DSM104440_RS06835 PF00005 ABC transporter DSM104440_RS06845 PF03055 Retinal pigment epithelial membrane protein DSM104440_RS06855 PF02464 Competence-damaged protein DSM104440_RS06860 PF01726 LexA DNA binding domain DSM104440_RS06860 PF00717 Peptidase S24-like DSM104440_RS06865 PF00154 recA bacterial DNA recombination protein DSM104440_RS06870 PF02631 RecX family DSM104440_RS06880 PF00857 Isochorismatase family DSM104440_RS06900 PF02594 Uncharacterised ACR, YggU family COG1872 DSM104440_RS06910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DSM104440_RS06910 PF02272 DHHA1 domain DSM104440_RS06910 PF01411 tRNA synthetases class II (A) DSM104440_RS06915 PF00293 NUDIX domain DSM104440_RS06915 PF09297 NADH pyrophosphatase zinc ribbon domain DSM104440_RS06915 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DSM104440_RS06935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSM104440_RS06935 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS06940 PF00364 Biotin-requiring enzyme DSM104440_RS06940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DSM104440_RS06940 PF02817 e3 binding domain DSM104440_RS06945 PF17831 Pyruvate dehydrogenase E1 component middle domain DSM104440_RS06945 PF00456 Transketolase, thiamine diphosphate binding domain DSM104440_RS06960 PF12706 Beta-lactamase superfamily domain DSM104440_RS06965 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSM104440_RS06965 PF00437 Type II/IV secretion system protein DSM104440_RS06970 PF01966 HD domain DSM104440_RS06975 PF17284 Spermidine synthase tetramerisation domain DSM104440_RS06980 PF17284 Spermidine synthase tetramerisation domain DSM104440_RS07000 PF00005 ABC transporter DSM104440_RS07000 PF02687 FtsX-like permease family DSM104440_RS07000 PF12704 MacB-like periplasmic core domain DSM104440_RS07005 PF12704 MacB-like periplasmic core domain DSM104440_RS07005 PF02687 FtsX-like permease family DSM104440_RS07005 PF00005 ABC transporter DSM104440_RS07010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS07025 PF01435 Peptidase family M48 DSM104440_RS07030 PF01967 MoaC family DSM104440_RS07040 PF09828 Chromate resistance exported protein DSM104440_RS07045 PF01206 Sulfurtransferase TusA DSM104440_RS07060 PF10458 Valyl tRNA synthetase tRNA binding arm DSM104440_RS07060 PF00133 tRNA synthetases class I (I, L, M and V) DSM104440_RS07060 PF08264 Anticodon-binding domain of tRNA DSM104440_RS07075 PF00883 Cytosol aminopeptidase family, catalytic domain DSM104440_RS07075 PF02789 Cytosol aminopeptidase family, N-terminal domain DSM104440_RS07105 PF00884 Sulfatase DSM104440_RS07105 PF08019 Phosphoethanolamine transferase EptA/EptB DSM104440_RS07115 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS07120 PF10017 Histidine-specific methyltransferase, SAM-dependent DSM104440_RS07130 PF03781 Sulfatase-modifying factor enzyme 1 DSM104440_RS07130 PF12867 DinB superfamily DSM104440_RS07135 PF02769 AIR synthase related protein, C-terminal domain DSM104440_RS07135 PF00586 AIR synthase related protein, N-terminal domain DSM104440_RS07145 PF03781 Sulfatase-modifying factor enzyme 1 DSM104440_RS07155 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DSM104440_RS07155 PF12169 DNA polymerase III subunits gamma and tau domain III DSM104440_RS07155 PF12170 DNA polymerase III tau subunit V interacting with alpha DSM104440_RS07160 PF02575 YbaB/EbfC DNA-binding family DSM104440_RS07165 PF13662 Toprim domain DSM104440_RS07165 PF02132 RecR protein DSM104440_RS07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS07210 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS07210 PF07689 KaiB domain DSM104440_RS07230 PF07290 Protein of unknown function (DUF1449) DSM104440_RS07235 PF01145 SPFH domain / Band 7 family DSM104440_RS07235 PF15975 Flotillin DSM104440_RS07245 PF01494 FAD binding domain DSM104440_RS07255 PF03466 LysR substrate binding domain DSM104440_RS07255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS07260 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS07265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS07275 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS07280 PF08450 SMP-30/Gluconolactonase/LRE-like region DSM104440_RS07285 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS07290 PF00356 Bacterial regulatory proteins, lacI family DSM104440_RS07300 PF00657 GDSL-like Lipase/Acylhydrolase DSM104440_RS07310 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DSM104440_RS07320 PF01427 D-ala-D-ala dipeptidase DSM104440_RS07325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DSM104440_RS07325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DSM104440_RS07330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DSM104440_RS07335 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS07335 PF00593 TonB dependent receptor DSM104440_RS07340 PF02016 LD-carboxypeptidase N-terminal domain DSM104440_RS07340 PF17676 LD-carboxypeptidase C-terminal domain DSM104440_RS07345 PF00144 Beta-lactamase DSM104440_RS07350 PF01510 N-acetylmuramoyl-L-alanine amidase DSM104440_RS07355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS07360 PF07670 Nucleoside recognition DSM104440_RS07375 PF00067 Cytochrome P450 DSM104440_RS07380 PF13191 AAA ATPase domain DSM104440_RS07380 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS07390 PF03109 ABC1 family DSM104440_RS07395 PF17676 LD-carboxypeptidase C-terminal domain DSM104440_RS07395 PF02016 LD-carboxypeptidase N-terminal domain DSM104440_RS07400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS07405 PF00390 Malic enzyme, N-terminal domain DSM104440_RS07405 PF01515 Phosphate acetyl/butaryl transferase DSM104440_RS07405 PF03949 Malic enzyme, NAD binding domain DSM104440_RS07465 PF01264 Chorismate synthase DSM104440_RS07470 PF00176 SNF2 family N-terminal domain DSM104440_RS07470 PF00271 Helicase conserved C-terminal domain DSM104440_RS07480 PF01555 DNA methylase DSM104440_RS07515 PF00330 Aconitase family (aconitate hydratase) DSM104440_RS07520 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB DSM104440_RS07530 PF00313 'Cold-shock' DNA-binding domain DSM104440_RS07540 PF00694 Aconitase C-terminal domain DSM104440_RS07545 PF00180 Isocitrate/isopropylmalate dehydrogenase DSM104440_RS07550 PF01118 Semialdehyde dehydrogenase, NAD binding domain DSM104440_RS07550 PF02774 Semialdehyde dehydrogenase, dimerisation domain DSM104440_RS07560 PF01416 tRNA pseudouridine synthase DSM104440_RS07565 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DSM104440_RS07570 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS07575 PF00290 Tryptophan synthase alpha chain DSM104440_RS07580 PF17848 Acetyl-coA carboxylase zinc finger domain DSM104440_RS07580 PF01039 Carboxyl transferase domain DSM104440_RS07585 PF08245 Mur ligase middle domain DSM104440_RS07585 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS07595 PF00156 Phosphoribosyl transferase domain DSM104440_RS07600 PF01053 Cys/Met metabolism PLP-dependent enzyme DSM104440_RS07615 PF01734 Patatin-like phospholipase DSM104440_RS07620 PF00149 Calcineurin-like phosphoesterase DSM104440_RS07625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DSM104440_RS07640 PF01406 tRNA synthetases class I (C) catalytic domain DSM104440_RS07640 PF09190 DALR domain DSM104440_RS07650 PF13458 Periplasmic binding protein DSM104440_RS07655 PF00226 DnaJ domain DSM104440_RS07655 PF01556 DnaJ C terminal domain DSM104440_RS07655 PF00684 DnaJ central domain DSM104440_RS07660 PF00012 Hsp70 protein DSM104440_RS07665 PF01025 GrpE DSM104440_RS07670 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DSM104440_RS07675 PF00762 Ferrochelatase DSM104440_RS07680 PF01628 HrcA protein C terminal domain DSM104440_RS07685 PF01513 ATP-NAD kinase DSM104440_RS07690 PF02463 RecF/RecN/SMC N terminal domain DSM104440_RS07710 PF02230 Phospholipase/Carboxylesterase DSM104440_RS07715 PF00994 Probable molybdopterin binding domain DSM104440_RS07720 PF04751 Protein of unknown function (DUF615) DSM104440_RS07725 PF01523 Putative modulator of DNA gyrase DSM104440_RS07730 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS07740 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DSM104440_RS07750 PF00578 AhpC/TSA family DSM104440_RS07770 PF00464 Serine hydroxymethyltransferase DSM104440_RS07775 PF03477 ATP cone domain DSM104440_RS07780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DSM104440_RS07780 PF01872 RibD C-terminal domain DSM104440_RS07785 PF00677 Lumazine binding domain DSM104440_RS07790 PF00925 GTP cyclohydrolase II DSM104440_RS07790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DSM104440_RS07795 PF00885 6,7-dimethyl-8-ribityllumazine synthase DSM104440_RS07800 PF01029 NusB family DSM104440_RS07805 PF02769 AIR synthase related protein, C-terminal domain DSM104440_RS07805 PF00586 AIR synthase related protein, N-terminal domain DSM104440_RS07810 PF04608 Phosphatidylglycerophosphatase A DSM104440_RS07815 PF03009 Glycerophosphoryl diester phosphodiesterase family DSM104440_RS07825 PF13614 AAA domain DSM104440_RS07835 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS07835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSM104440_RS07840 PF08534 Redoxin DSM104440_RS07840 PF00462 Glutaredoxin DSM104440_RS07845 PF03466 LysR substrate binding domain DSM104440_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS07850 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS07880 PF02915 Rubrerythrin DSM104440_RS07890 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS07900 PF01979 Amidohydrolase family DSM104440_RS07925 PF01175 Urocanase Rossmann-like domain DSM104440_RS07925 PF17392 Urocanase C-terminal domain DSM104440_RS07925 PF17391 Urocanase N-terminal domain DSM104440_RS07930 PF13361 UvrD-like helicase C-terminal domain DSM104440_RS07930 PF00580 UvrD/REP helicase N-terminal domain DSM104440_RS07960 PF07995 Glucose / Sorbosone dehydrogenase DSM104440_RS07980 PF01906 Putative heavy-metal-binding DSM104440_RS08020 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS08020 PF00107 Zinc-binding dehydrogenase DSM104440_RS08025 PF00756 Putative esterase DSM104440_RS08030 PF13462 Thioredoxin DSM104440_RS08030 PF06965 Na+/H+ antiporter 1 DSM104440_RS08035 PF00023 Ankyrin repeat DSM104440_RS08040 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS08045 PF00107 Zinc-binding dehydrogenase DSM104440_RS08045 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS08055 PF00221 Aromatic amino acid lyase DSM104440_RS08075 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS08080 PF10431 C-terminal, D2-small domain, of ClpB protein DSM104440_RS08080 PF07724 AAA domain (Cdc48 subfamily) DSM104440_RS08080 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS08085 PF00941 FAD binding domain in molybdopterin dehydrogenase DSM104440_RS08085 PF03450 CO dehydrogenase flavoprotein C-terminal domain DSM104440_RS08090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DSM104440_RS08090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DSM104440_RS08095 PF01799 [2Fe-2S] binding domain DSM104440_RS08095 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS08105 PF00920 Dehydratase family DSM104440_RS08110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS08110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS08115 PF03459 TOBE domain DSM104440_RS08115 PF17912 MalK OB fold domain DSM104440_RS08115 PF00005 ABC transporter DSM104440_RS08125 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS08135 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS08145 PF13580 SIS domain DSM104440_RS08150 PF13091 PLD-like domain DSM104440_RS08160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS08160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS08165 PF02615 Malate/L-lactate dehydrogenase DSM104440_RS08170 PF01557 Fumarylacetoacetate (FAA) hydrolase family DSM104440_RS08180 PF07729 FCD domain DSM104440_RS08180 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS08190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS08195 PF08666 SAF domain DSM104440_RS08195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DSM104440_RS08200 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS08205 PF00582 Universal stress protein family DSM104440_RS08215 PF01272 Transcription elongation factor, GreA/GreB, C-term DSM104440_RS08215 PF14760 Rnk N-terminus DSM104440_RS08220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS08220 PF03466 LysR substrate binding domain DSM104440_RS08225 PF03334 Na+/H+ antiporter subunit DSM104440_RS08230 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DSM104440_RS08235 PF01899 Na+/H+ ion antiporter subunit DSM104440_RS08240 PF00361 Proton-conducting membrane transporter DSM104440_RS08245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DSM104440_RS08250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DSM104440_RS08250 PF00361 Proton-conducting membrane transporter DSM104440_RS08250 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DSM104440_RS08250 PF13244 Domain of unknown function (DUF4040) DSM104440_RS08255 PF03471 Transporter associated domain DSM104440_RS08255 PF03741 Integral membrane protein TerC family DSM104440_RS08285 PF00672 HAMP domain DSM104440_RS08285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS08285 PF02203 Tar ligand binding domain homologue DSM104440_RS08290 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSM104440_RS08310 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS08310 PF00593 TonB dependent receptor DSM104440_RS08330 PF00873 AcrB/AcrD/AcrF family DSM104440_RS08335 PF00529 HlyD membrane-fusion protein of T1SS DSM104440_RS08335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS08360 PF13954 PapC N-terminal domain DSM104440_RS08360 PF00577 Outer membrane usher protein DSM104440_RS08360 PF13953 PapC C-terminal domain DSM104440_RS08390 PF01979 Amidohydrolase family DSM104440_RS08400 PF00230 Major intrinsic protein DSM104440_RS08405 PF03692 Putative zinc- or iron-chelating domain DSM104440_RS08435 PF16868 NMT1-like family DSM104440_RS08440 PF00202 Aminotransferase class-III DSM104440_RS08450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSM104440_RS08530 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS08535 PF00892 EamA-like transporter family DSM104440_RS08540 PF00056 lactate/malate dehydrogenase, NAD binding domain DSM104440_RS08540 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DSM104440_RS08555 PF08281 Sigma-70, region 4 DSM104440_RS08555 PF04542 Sigma-70 region 2 DSM104440_RS08570 PF01865 Protein of unknown function DUF47 DSM104440_RS08575 PF01384 Phosphate transporter family DSM104440_RS08595 PF13847 Methyltransferase domain DSM104440_RS08625 PF00694 Aconitase C-terminal domain DSM104440_RS08625 PF00330 Aconitase family (aconitate hydratase) DSM104440_RS08635 PF03972 MmgE/PrpD family DSM104440_RS08645 PF00285 Citrate synthase, C-terminal domain DSM104440_RS08660 PF01575 MaoC like domain DSM104440_RS08665 PF03328 HpcH/HpaI aldolase/citrate lyase family DSM104440_RS08670 PF07702 UTRA domain DSM104440_RS08670 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS08680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DSM104440_RS08685 PF02910 Fumarate reductase flavoprotein C-term DSM104440_RS08685 PF00890 FAD binding domain DSM104440_RS08690 PF13085 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS08695 PF03937 Flavinator of succinate dehydrogenase DSM104440_RS08700 PF00285 Citrate synthase, C-terminal domain DSM104440_RS08705 PF16078 2-oxoglutarate dehydrogenase N-terminus DSM104440_RS08705 PF16870 2-oxoglutarate dehydrogenase C-terminal DSM104440_RS08705 PF00676 Dehydrogenase E1 component DSM104440_RS08705 PF02779 Transketolase, pyrimidine binding domain DSM104440_RS08710 PF00364 Biotin-requiring enzyme DSM104440_RS08710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DSM104440_RS08710 PF02817 e3 binding domain DSM104440_RS08725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSM104440_RS08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS08730 PF03969 AFG1-like ATPase DSM104440_RS08740 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS08740 PF16177 Acetyl-coenzyme A synthetase N-terminus DSM104440_RS08740 PF00501 AMP-binding enzyme DSM104440_RS08750 PF04715 Anthranilate synthase component I, N terminal region DSM104440_RS08750 PF00425 chorismate binding enzyme DSM104440_RS08755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DSM104440_RS08755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DSM104440_RS08760 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS08760 PF00501 AMP-binding enzyme DSM104440_RS08775 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS08790 PF00005 ABC transporter DSM104440_RS08790 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSM104440_RS08795 PF00005 ABC transporter DSM104440_RS08815 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS08815 PF00501 AMP-binding enzyme DSM104440_RS08820 PF00005 ABC transporter DSM104440_RS08820 PF16326 ABC transporter C-terminal domain DSM104440_RS08820 PF12848 ABC transporter DSM104440_RS08830 PF01012 Electron transfer flavoprotein domain DSM104440_RS08835 PF01012 Electron transfer flavoprotein domain DSM104440_RS08835 PF00766 Electron transfer flavoprotein FAD-binding domain DSM104440_RS08840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS08840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS08840 PF12806 Acetyl-CoA dehydrogenase C-terminal like DSM104440_RS08840 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS08845 PF02659 Putative manganese efflux pump DSM104440_RS08860 PF00873 AcrB/AcrD/AcrF family DSM104440_RS08870 PF07995 Glucose / Sorbosone dehydrogenase DSM104440_RS08880 PF06167 Glucose-regulated metallo-peptidase M90 DSM104440_RS08890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DSM104440_RS08890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS08890 PF00672 HAMP domain DSM104440_RS08890 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS08890 PF01627 Hpt domain DSM104440_RS08890 PF00072 Response regulator receiver domain DSM104440_RS08900 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS08905 PF01557 Fumarylacetoacetate (FAA) hydrolase family DSM104440_RS08910 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS08915 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS08925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DSM104440_RS08925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DSM104440_RS08935 PF00171 Aldehyde dehydrogenase family DSM104440_RS08940 PF00989 PAS fold DSM104440_RS08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS08940 PF13493 Domain of unknown function (DUF4118) DSM104440_RS08940 PF08447 PAS fold DSM104440_RS08940 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS08940 PF13426 PAS domain DSM104440_RS08960 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS08970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS08970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS09000 PF00289 Biotin carboxylase, N-terminal domain DSM104440_RS09000 PF02785 Biotin carboxylase C-terminal domain DSM104440_RS09000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSM104440_RS09000 PF18140 Propionyl-coenzyme A carboxylase BT domain DSM104440_RS09000 PF00364 Biotin-requiring enzyme DSM104440_RS09005 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase DSM104440_RS09010 PF13180 PDZ domain DSM104440_RS09010 PF17820 PDZ domain DSM104440_RS09020 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS09025 PF01039 Carboxyl transferase domain DSM104440_RS09035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS09035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS09035 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS09050 PF00108 Thiolase, N-terminal domain DSM104440_RS09050 PF02803 Thiolase, C-terminal domain DSM104440_RS09065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS09065 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS09065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS09070 PF00106 short chain dehydrogenase DSM104440_RS09080 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSM104440_RS09080 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS09085 PF00501 AMP-binding enzyme DSM104440_RS09090 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSM104440_RS09090 PF00005 ABC transporter DSM104440_RS09095 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS09110 PF00005 ABC transporter DSM104440_RS09115 PF14535 AMP-binding enzyme C-terminal domain DSM104440_RS09115 PF00501 AMP-binding enzyme DSM104440_RS09120 PF08402 TOBE domain DSM104440_RS09120 PF00005 ABC transporter DSM104440_RS09125 PF13416 Bacterial extracellular solute-binding protein DSM104440_RS09145 PF01258 Prokaryotic dksA/traR C4-type zinc finger DSM104440_RS09165 PF00005 ABC transporter DSM104440_RS09175 PF13307 Helicase C-terminal domain DSM104440_RS09175 PF04851 Type III restriction enzyme, res subunit DSM104440_RS09200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS09200 PF00672 HAMP domain DSM104440_RS09200 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS09205 PF00072 Response regulator receiver domain DSM104440_RS09205 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS09225 PF00814 Glycoprotease family DSM104440_RS09235 PF03167 Uracil DNA glycosylase superfamily DSM104440_RS09245 PF04536 TPM domain DSM104440_RS09255 PF01614 Bacterial transcriptional regulator DSM104440_RS09255 PF09339 IclR helix-turn-helix domain DSM104440_RS09260 PF03918 Cytochrome C biogenesis protein DSM104440_RS09265 PF08534 Redoxin DSM104440_RS09270 PF01578 Cytochrome C assembly protein DSM104440_RS09270 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DSM104440_RS09275 PF03100 CcmE DSM104440_RS09280 PF01578 Cytochrome C assembly protein DSM104440_RS09285 PF03379 CcmB protein DSM104440_RS09290 PF00005 ABC transporter DSM104440_RS09330 PF00027 Cyclic nucleotide-binding domain DSM104440_RS09330 PF13545 Crp-like helix-turn-helix domain DSM104440_RS09335 PF11871 Domain of unknown function (DUF3391) DSM104440_RS09335 PF01966 HD domain DSM104440_RS09340 PF00563 EAL domain DSM104440_RS09340 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS09340 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS09345 PF07690 Major Facilitator Superfamily DSM104440_RS09360 PF02515 CoA-transferase family III DSM104440_RS09365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSM104440_RS09365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS09365 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DSM104440_RS09385 PF00072 Response regulator receiver domain DSM104440_RS09390 PF02895 Signal transducing histidine kinase, homodimeric domain DSM104440_RS09390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS09390 PF01584 CheW-like domain DSM104440_RS09390 PF01627 Hpt domain DSM104440_RS09390 PF09078 CheY binding DSM104440_RS09395 PF03705 CheR methyltransferase, all-alpha domain DSM104440_RS09395 PF01739 CheR methyltransferase, SAM binding domain DSM104440_RS09400 PF03975 CheD chemotactic sensory transduction DSM104440_RS09405 PF00072 Response regulator receiver domain DSM104440_RS09405 PF01339 CheB methylesterase DSM104440_RS09410 PF01584 CheW-like domain DSM104440_RS09415 PF00069 Protein kinase domain DSM104440_RS09415 PF03793 PASTA domain DSM104440_RS09420 PF02203 Tar ligand binding domain homologue DSM104440_RS09420 PF00672 HAMP domain DSM104440_RS09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS09425 PF01584 CheW-like domain DSM104440_RS09435 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DSM104440_RS09435 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DSM104440_RS09435 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DSM104440_RS09440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS09450 PF01212 Beta-eliminating lyase DSM104440_RS09470 PF03150 Di-haem cytochrome c peroxidase DSM104440_RS09470 PF00034 Cytochrome c DSM104440_RS09485 PF02562 PhoH-like protein DSM104440_RS09485 PF13638 PIN domain DSM104440_RS09490 PF00578 AhpC/TSA family DSM104440_RS09495 PF01522 Polysaccharide deacetylase DSM104440_RS09505 PF00593 TonB dependent receptor DSM104440_RS09505 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS09515 PF01152 Bacterial-like globin DSM104440_RS09520 PF03144 Elongation factor Tu domain 2 DSM104440_RS09520 PF00679 Elongation factor G C-terminus DSM104440_RS09520 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS09545 PF02646 RmuC family DSM104440_RS09550 PF00107 Zinc-binding dehydrogenase DSM104440_RS09550 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS09555 PF00180 Isocitrate/isopropylmalate dehydrogenase DSM104440_RS09560 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DSM104440_RS09565 PF02597 ThiS family DSM104440_RS09570 PF02391 MoaE protein DSM104440_RS09590 PF00174 Oxidoreductase molybdopterin binding domain DSM104440_RS09655 PF00912 Transglycosylase DSM104440_RS09655 PF00905 Penicillin binding protein transpeptidase domain DSM104440_RS09680 PF01381 Helix-turn-helix DSM104440_RS09710 PF00072 Response regulator receiver domain DSM104440_RS09710 PF01966 HD domain DSM104440_RS09730 PF00072 Response regulator receiver domain DSM104440_RS09735 PF00005 ABC transporter DSM104440_RS09735 PF00664 ABC transporter transmembrane region DSM104440_RS09735 PF03412 Peptidase C39 family DSM104440_RS09770 PF01022 Bacterial regulatory protein, arsR family DSM104440_RS09775 PF00717 Peptidase S24-like DSM104440_RS09775 PF01726 LexA DNA binding domain DSM104440_RS09795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSM104440_RS09795 PF01336 OB-fold nucleic acid binding domain DSM104440_RS09795 PF02811 PHP domain DSM104440_RS09795 PF14579 Helix-hairpin-helix motif DSM104440_RS09795 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSM104440_RS09825 PF00072 Response regulator receiver domain DSM104440_RS09825 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS09830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS09830 PF00072 Response regulator receiver domain DSM104440_RS09830 PF13426 PAS domain DSM104440_RS09870 PF13378 Enolase C-terminal domain-like DSM104440_RS09870 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DSM104440_RS09880 PF06826 Predicted Permease Membrane Region DSM104440_RS09880 PF02080 TrkA-C domain DSM104440_RS09885 PF08666 SAF domain DSM104440_RS09885 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DSM104440_RS09895 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS09905 PF18011 C-terminal domain found in long catalases DSM104440_RS09905 PF00199 Catalase DSM104440_RS09905 PF06628 Catalase-related immune-responsive DSM104440_RS09915 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS09915 PF00072 Response regulator receiver domain DSM104440_RS09915 PF00158 Sigma-54 interaction domain DSM104440_RS09920 PF00158 Sigma-54 interaction domain DSM104440_RS09920 PF00072 Response regulator receiver domain DSM104440_RS09920 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS09945 PF04972 BON domain DSM104440_RS09955 PF10415 Fumarase C C-terminus DSM104440_RS09955 PF00206 Lyase DSM104440_RS09960 PF01292 Prokaryotic cytochrome b561 DSM104440_RS09965 PF04264 YceI-like domain DSM104440_RS09970 PF04264 YceI-like domain DSM104440_RS09985 PF00326 Prolyl oligopeptidase family DSM104440_RS09985 PF07676 WD40-like Beta Propeller Repeat DSM104440_RS09985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DSM104440_RS10000 PF04324 BFD-like [2Fe-2S] binding domain DSM104440_RS10005 PF03544 Gram-negative bacterial TonB protein C-terminal DSM104440_RS10010 PF03239 Iron permease FTR1 family DSM104440_RS10015 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS10015 PF00593 TonB dependent receptor DSM104440_RS10020 PF18331 PKHD-type hydroxylase C-terminal domain DSM104440_RS10020 PF13640 2OG-Fe(II) oxygenase superfamily DSM104440_RS10030 PF00210 Ferritin-like domain DSM104440_RS10040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DSM104440_RS10040 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS10040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS10060 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS10060 PF00501 AMP-binding enzyme DSM104440_RS10065 PF01039 Carboxyl transferase domain DSM104440_RS10070 PF02913 FAD linked oxidases, C-terminal domain DSM104440_RS10070 PF01565 FAD binding domain DSM104440_RS10070 PF13183 4Fe-4S dicluster domain DSM104440_RS10075 PF07729 FCD domain DSM104440_RS10075 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS10080 PF00266 Aminotransferase class-V DSM104440_RS10085 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS10095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS10100 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS10115 PF00171 Aldehyde dehydrogenase family DSM104440_RS10130 PF00202 Aminotransferase class-III DSM104440_RS10135 PF00501 AMP-binding enzyme DSM104440_RS10135 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS10155 PF06974 Protein of unknown function (DUF1298) DSM104440_RS10155 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DSM104440_RS10185 PF08360 QacR-like protein, C-terminal region DSM104440_RS10185 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS10195 PF00106 short chain dehydrogenase DSM104440_RS10200 PF00578 AhpC/TSA family DSM104440_RS10205 PF01674 Lipase (class 2) DSM104440_RS10215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS10215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS10220 PF18125 RlmM ferredoxin-like domain DSM104440_RS10220 PF01728 FtsJ-like methyltransferase DSM104440_RS10225 PF01026 TatD related DNase DSM104440_RS10240 PF09115 DNA polymerase III, delta subunit, C terminal DSM104440_RS10245 PF02223 Thymidylate kinase DSM104440_RS10250 PF02618 YceG-like family DSM104440_RS10255 PF01063 Amino-transferase class IV DSM104440_RS10260 PF00109 Beta-ketoacyl synthase, N-terminal domain DSM104440_RS10260 PF02801 Beta-ketoacyl synthase, C-terminal domain DSM104440_RS10265 PF00550 Phosphopantetheine attachment site DSM104440_RS10275 PF00698 Acyl transferase domain DSM104440_RS10280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DSM104440_RS10280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DSM104440_RS10285 PF02504 Fatty acid synthesis protein DSM104440_RS10290 PF01783 Ribosomal L32p protein family DSM104440_RS10295 PF02620 Large ribosomal RNA subunit accumulation protein YceD DSM104440_RS10300 PF02545 Maf-like protein DSM104440_RS10305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSM104440_RS10310 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS10310 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS10310 PF00563 EAL domain DSM104440_RS10315 PF01343 Peptidase family S49 DSM104440_RS10315 PF06965 Na+/H+ antiporter 1 DSM104440_RS10325 PF13419 Haloacid dehalogenase-like hydrolase DSM104440_RS10330 PF01479 S4 domain DSM104440_RS10330 PF00849 RNA pseudouridylate synthase DSM104440_RS10335 PF00575 S1 RNA binding domain DSM104440_RS10335 PF12111 Polyribonucleotide phosphorylase C terminal DSM104440_RS10335 PF10150 Ribonuclease E/G family DSM104440_RS10340 PF01323 DSBA-like thioredoxin domain DSM104440_RS10350 PF01451 Low molecular weight phosphotyrosine protein phosphatase DSM104440_RS10355 PF17757 UvrB interaction domain DSM104440_RS10355 PF12344 Ultra-violet resistance protein B DSM104440_RS10355 PF02151 UvrB/uvrC motif DSM104440_RS10355 PF04851 Type III restriction enzyme, res subunit DSM104440_RS10355 PF00271 Helicase conserved C-terminal domain DSM104440_RS10360 PF00155 Aminotransferase class I and II DSM104440_RS10365 PF06165 Glycosyltransferase family 36 DSM104440_RS10365 PF10091 Putative glucoamylase DSM104440_RS10365 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DSM104440_RS10380 PF00248 Aldo/keto reductase family DSM104440_RS10385 PF00005 ABC transporter DSM104440_RS10390 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS10395 PF13407 Periplasmic binding protein domain DSM104440_RS10410 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DSM104440_RS10410 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DSM104440_RS10415 PF00005 ABC transporter DSM104440_RS10415 PF17912 MalK OB fold domain DSM104440_RS10420 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS10425 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS10435 PF00356 Bacterial regulatory proteins, lacI family DSM104440_RS10440 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS10440 PF00593 TonB dependent receptor DSM104440_RS10445 PF07477 Glycosyl hydrolase family 67 C-terminus DSM104440_RS10445 PF07488 Glycosyl hydrolase family 67 middle domain DSM104440_RS10445 PF03648 Glycosyl hydrolase family 67 N-terminus DSM104440_RS10450 PF01915 Glycosyl hydrolase family 3 C-terminal domain DSM104440_RS10450 PF00933 Glycosyl hydrolase family 3 N terminal domain DSM104440_RS10450 PF14310 Fibronectin type III-like domain DSM104440_RS10455 PF00933 Glycosyl hydrolase family 3 N terminal domain DSM104440_RS10455 PF01915 Glycosyl hydrolase family 3 C-terminal domain DSM104440_RS10455 PF14310 Fibronectin type III-like domain DSM104440_RS10465 PF00672 HAMP domain DSM104440_RS10465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DSM104440_RS10465 PF02203 Tar ligand binding domain homologue DSM104440_RS10485 PF04616 Glycosyl hydrolases family 43 DSM104440_RS10485 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DSM104440_RS10495 PF13378 Enolase C-terminal domain-like DSM104440_RS10495 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DSM104440_RS10500 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DSM104440_RS10500 PF04616 Glycosyl hydrolases family 43 DSM104440_RS10510 PF00529 HlyD membrane-fusion protein of T1SS DSM104440_RS10510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS10515 PF02321 Outer membrane efflux protein DSM104440_RS10520 PF01699 Sodium/calcium exchanger protein DSM104440_RS10525 PF01053 Cys/Met metabolism PLP-dependent enzyme DSM104440_RS10540 PF00849 RNA pseudouridylate synthase DSM104440_RS10540 PF01479 S4 domain DSM104440_RS10560 PF00144 Beta-lactamase DSM104440_RS10565 PF13545 Crp-like helix-turn-helix domain DSM104440_RS10565 PF00027 Cyclic nucleotide-binding domain DSM104440_RS10575 PF09349 OHCU decarboxylase DSM104440_RS10575 PF01014 Uricase DSM104440_RS10585 PF00576 HIUase/Transthyretin family DSM104440_RS10590 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS10590 PF01799 [2Fe-2S] binding domain DSM104440_RS10595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DSM104440_RS10595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DSM104440_RS10610 PF01979 Amidohydrolase family DSM104440_RS10615 PF00962 Adenosine/AMP deaminase DSM104440_RS10620 PF02608 ABC transporter substrate-binding protein PnrA-like DSM104440_RS10625 PF00356 Bacterial regulatory proteins, lacI family DSM104440_RS10630 PF00005 ABC transporter DSM104440_RS10635 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS10640 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS10645 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DSM104440_RS10650 PF01048 Phosphorylase superfamily DSM104440_RS10655 PF01791 DeoC/LacD family aldolase DSM104440_RS10660 PF00171 Aldehyde dehydrogenase family DSM104440_RS10665 PF02885 Glycosyl transferase family, helical bundle domain DSM104440_RS10665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DSM104440_RS10665 PF00591 Glycosyl transferase family, a/b domain DSM104440_RS10675 PF00565 Staphylococcal nuclease homologue DSM104440_RS10675 PF00746 LPXTG cell wall anchor motif DSM104440_RS10675 PF02872 5'-nucleotidase, C-terminal domain DSM104440_RS10675 PF00149 Calcineurin-like phosphoesterase DSM104440_RS10680 PF00925 GTP cyclohydrolase II DSM104440_RS10695 PF00593 TonB dependent receptor DSM104440_RS10720 PF01066 CDP-alcohol phosphatidyltransferase DSM104440_RS10725 PF01541 GIY-YIG catalytic domain DSM104440_RS10725 PF02151 UvrB/uvrC motif DSM104440_RS10725 PF08459 UvrC Helix-hairpin-helix N-terminal DSM104440_RS10735 PF01648 4'-phosphopantetheinyl transferase superfamily DSM104440_RS10740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DSM104440_RS10745 PF11967 Recombination protein O N terminal DSM104440_RS10745 PF02565 Recombination protein O C terminal DSM104440_RS10750 PF07650 KH domain DSM104440_RS10750 PF01926 50S ribosome-binding GTPase DSM104440_RS10755 PF14622 Ribonuclease-III-like DSM104440_RS10755 PF00035 Double-stranded RNA binding motif DSM104440_RS10765 PF10502 Signal peptidase, peptidase S26 DSM104440_RS10770 PF00679 Elongation factor G C-terminus DSM104440_RS10770 PF06421 GTP-binding protein LepA C-terminus DSM104440_RS10770 PF03144 Elongation factor Tu domain 2 DSM104440_RS10770 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS10780 PF13180 PDZ domain DSM104440_RS10795 PF08281 Sigma-70, region 4 DSM104440_RS10795 PF04542 Sigma-70 region 2 DSM104440_RS10800 PF00890 FAD binding domain DSM104440_RS10800 PF02910 Fumarate reductase flavoprotein C-term DSM104440_RS10805 PF01256 Carbohydrate kinase DSM104440_RS10805 PF03853 YjeF-related protein N-terminus DSM104440_RS10815 PF00478 IMP dehydrogenase / GMP reductase domain DSM104440_RS10815 PF00571 CBS domain DSM104440_RS10820 PF00005 ABC transporter DSM104440_RS10825 PF12704 MacB-like periplasmic core domain DSM104440_RS10825 PF02687 FtsX-like permease family DSM104440_RS10835 PF01757 Acyltransferase family DSM104440_RS10840 PF13673 Acetyltransferase (GNAT) domain DSM104440_RS10840 PF13302 Acetyltransferase (GNAT) domain DSM104440_RS10840 PF00958 GMP synthase C terminal domain DSM104440_RS10840 PF03352 Methyladenine glycosylase DSM104440_RS10840 PF00117 Glutamine amidotransferase class-I DSM104440_RS10855 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS10860 PF02515 CoA-transferase family III DSM104440_RS10885 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS10885 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS10885 PF13188 PAS domain DSM104440_RS10885 PF00563 EAL domain DSM104440_RS10890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DSM104440_RS10890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DSM104440_RS10905 PF03061 Thioesterase superfamily DSM104440_RS10920 PF02405 Permease MlaE DSM104440_RS10925 PF00005 ABC transporter DSM104440_RS10925 PF09383 NIL domain DSM104440_RS10940 PF00384 Molybdopterin oxidoreductase DSM104440_RS10940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSM104440_RS10940 PF01568 Molydopterin dinucleotide binding domain DSM104440_RS10955 PF05195 Aminopeptidase P, N-terminal domain DSM104440_RS10955 PF00557 Metallopeptidase family M24 DSM104440_RS10960 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS10960 PF07729 FCD domain DSM104440_RS10965 PF05544 Proline racemase DSM104440_RS10970 PF00701 Dihydrodipicolinate synthetase family DSM104440_RS10980 PF02245 Methylpurine-DNA glycosylase (MPG) DSM104440_RS10985 PF00326 Prolyl oligopeptidase family DSM104440_RS10985 PF07676 WD40-like Beta Propeller Repeat DSM104440_RS10985 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DSM104440_RS10995 PF07883 Cupin domain DSM104440_RS10995 PF12833 Helix-turn-helix domain DSM104440_RS11000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS11010 PF12697 Alpha/beta hydrolase family DSM104440_RS11040 PF01266 FAD dependent oxidoreductase DSM104440_RS11045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DSM104440_RS11050 PF01799 [2Fe-2S] binding domain DSM104440_RS11050 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS11055 PF03641 Possible lysine decarboxylase DSM104440_RS11065 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS11080 PF00106 short chain dehydrogenase DSM104440_RS11100 PF12852 Cupin DSM104440_RS11100 PF12833 Helix-turn-helix domain DSM104440_RS11105 PF18766 SWI2/SNF2 ATPase DSM104440_RS11105 PF11867 Domain of unknown function (DUF3387) DSM104440_RS11105 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DSM104440_RS11125 PF01420 Type I restriction modification DNA specificity domain DSM104440_RS11130 PF02384 N-6 DNA Methylase DSM104440_RS11140 PF17871 AAA lid domain DSM104440_RS11140 PF02861 Clp amino terminal domain, pathogenicity island component DSM104440_RS11140 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS11140 PF10431 C-terminal, D2-small domain, of ClpB protein DSM104440_RS11140 PF07724 AAA domain (Cdc48 subfamily) DSM104440_RS11145 PF00535 Glycosyl transferase family 2 DSM104440_RS11150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DSM104440_RS11150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DSM104440_RS11170 PF14821 Threonine synthase N terminus DSM104440_RS11170 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS11175 PF03447 Homoserine dehydrogenase, NAD binding domain DSM104440_RS11175 PF01842 ACT domain DSM104440_RS11175 PF00742 Homoserine dehydrogenase DSM104440_RS11180 PF00155 Aminotransferase class I and II DSM104440_RS11185 PF04430 Protein of unknown function (DUF498/DUF598) DSM104440_RS11190 PF00226 DnaJ domain DSM104440_RS11190 PF01556 DnaJ C terminal domain DSM104440_RS11190 PF00684 DnaJ central domain DSM104440_RS11195 PF00226 DnaJ domain DSM104440_RS11195 PF00684 DnaJ central domain DSM104440_RS11195 PF01556 DnaJ C terminal domain DSM104440_RS11200 PF05088 Bacterial NAD-glutamate dehydrogenase DSM104440_RS11205 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSM104440_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS11220 PF00005 ABC transporter DSM104440_RS11230 PF00850 Histone deacetylase domain DSM104440_RS11240 PF07726 ATPase family associated with various cellular activities (AAA) DSM104440_RS11240 PF17863 AAA lid domain DSM104440_RS11250 PF01841 Transglutaminase-like superfamily DSM104440_RS11250 PF13559 Domain of unknown function (DUF4129) DSM104440_RS11250 PF11992 Domain of unknown function (DUF3488) DSM104440_RS11255 PF01043 SecA preprotein cross-linking domain DSM104440_RS11255 PF07516 SecA Wing and Scaffold domain DSM104440_RS11255 PF02810 SEC-C motif DSM104440_RS11255 PF07517 SecA DEAD-like domain DSM104440_RS11260 PF01551 Peptidase family M23 DSM104440_RS11260 PF01476 LysM domain DSM104440_RS11270 PF01975 Survival protein SurE DSM104440_RS11275 PF01431 Peptidase family M13 DSM104440_RS11275 PF05649 Peptidase family M13 DSM104440_RS11280 PF01979 Amidohydrolase family DSM104440_RS11285 PF02347 Glycine cleavage system P-protein DSM104440_RS11290 PF01597 Glycine cleavage H-protein DSM104440_RS11295 PF08669 Glycine cleavage T-protein C-terminal barrel domain DSM104440_RS11295 PF01571 Aminomethyltransferase folate-binding domain DSM104440_RS11300 PF00155 Aminotransferase class I and II DSM104440_RS11305 PF00107 Zinc-binding dehydrogenase DSM104440_RS11305 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS11325 PF00005 ABC transporter DSM104440_RS11325 PF08402 TOBE domain DSM104440_RS11330 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS11340 PF13419 Haloacid dehalogenase-like hydrolase DSM104440_RS11360 PF00216 Bacterial DNA-binding protein DSM104440_RS11365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DSM104440_RS11365 PF01588 Putative tRNA binding domain DSM104440_RS11365 PF03147 Ferredoxin-fold anticodon binding domain DSM104440_RS11365 PF03484 tRNA synthetase B5 domain DSM104440_RS11365 PF03483 B3/4 domain DSM104440_RS11370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DSM104440_RS11370 PF01409 tRNA synthetases class II core domain (F) DSM104440_RS11375 PF00453 Ribosomal protein L20 DSM104440_RS11380 PF01632 Ribosomal protein L35 DSM104440_RS11385 PF00707 Translation initiation factor IF-3, C-terminal domain DSM104440_RS11385 PF05198 Translation initiation factor IF-3, N-terminal domain DSM104440_RS11390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSM104440_RS11390 PF02824 TGS domain DSM104440_RS11390 PF03129 Anticodon binding domain DSM104440_RS11390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DSM104440_RS11395 PF01144 Coenzyme A transferase DSM104440_RS11400 PF01144 Coenzyme A transferase DSM104440_RS11410 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS11415 PF02653 Branched-chain amino acid transport system / permease component DSM104440_RS11420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DSM104440_RS11420 PF00005 ABC transporter DSM104440_RS11425 PF00005 ABC transporter DSM104440_RS11430 PF01774 UreD urease accessory protein DSM104440_RS11435 PF00547 Urease, gamma subunit DSM104440_RS11440 PF00699 Urease beta subunit DSM104440_RS11445 PF00449 Urease alpha-subunit, N-terminal domain DSM104440_RS11445 PF01979 Amidohydrolase family DSM104440_RS11450 PF05194 UreE urease accessory protein, C-terminal domain DSM104440_RS11450 PF02814 UreE urease accessory protein, N-terminal domain DSM104440_RS11455 PF01730 UreF DSM104440_RS11460 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSM104440_RS11480 PF17785 PUA-like domain DSM104440_RS11480 PF10672 S-adenosylmethionine-dependent methyltransferase DSM104440_RS11490 PF02824 TGS domain DSM104440_RS11490 PF04607 Region found in RelA / SpoT proteins DSM104440_RS11490 PF13291 ACT domain DSM104440_RS11500 PF14403 Circularly permuted ATP-grasp type 2 DSM104440_RS11505 PF14403 Circularly permuted ATP-grasp type 2 DSM104440_RS11505 PF04168 A predicted alpha-helical domain with a conserved ER motif. DSM104440_RS11530 PF03772 Competence protein DSM104440_RS11530 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS11540 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DSM104440_RS11540 PF00730 HhH-GPD superfamily base excision DNA repair protein DSM104440_RS11565 PF02735 Ku70/Ku80 beta-barrel domain DSM104440_RS11580 PF00005 ABC transporter DSM104440_RS11585 PF02687 FtsX-like permease family DSM104440_RS11585 PF12704 MacB-like periplasmic core domain DSM104440_RS11595 PF01368 DHH family DSM104440_RS11595 PF17768 RecJ OB domain DSM104440_RS11595 PF02272 DHHA1 domain DSM104440_RS11600 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS11600 PF00593 TonB dependent receptor DSM104440_RS11605 PF03462 PCRF domain DSM104440_RS11605 PF00472 RF-1 domain DSM104440_RS11610 PF07687 Peptidase dimerisation domain DSM104440_RS11610 PF01546 Peptidase family M20/M25/M40 DSM104440_RS11615 PF00152 tRNA synthetases class II (D, K and N) DSM104440_RS11615 PF01336 OB-fold nucleic acid binding domain DSM104440_RS11625 PF18693 TRAM domain DSM104440_RS11625 PF00919 Uncharacterized protein family UPF0004 DSM104440_RS11625 PF04055 Radical SAM superfamily DSM104440_RS11630 PF07879 PHB/PHA accumulation regulator DNA-binding domain DSM104440_RS11630 PF05233 PHB accumulation regulatory domain DSM104440_RS11645 PF00106 short chain dehydrogenase DSM104440_RS11650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DSM104440_RS11650 PF00326 Prolyl oligopeptidase family DSM104440_RS11655 PF00196 Bacterial regulatory proteins, luxR family DSM104440_RS11655 PF00072 Response regulator receiver domain DSM104440_RS11660 PF13492 GAF domain DSM104440_RS11660 PF07730 Histidine kinase DSM104440_RS11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS11675 PF00106 short chain dehydrogenase DSM104440_RS11680 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DSM104440_RS11690 PF02578 Multi-copper polyphenol oxidoreductase laccase DSM104440_RS11695 PF00849 RNA pseudouridylate synthase DSM104440_RS11700 PF13525 Outer membrane lipoprotein DSM104440_RS11705 PF02503 Polyphosphate kinase middle domain DSM104440_RS11705 PF13090 Polyphosphate kinase C-terminal domain 2 DSM104440_RS11705 PF17941 Polyphosphate kinase C-terminal domain 1 DSM104440_RS11705 PF13089 Polyphosphate kinase N-terminal domain DSM104440_RS11710 PF02541 Ppx/GppA phosphatase family DSM104440_RS11715 PF00300 Histidine phosphatase superfamily (branch 1) DSM104440_RS11725 PF05721 Phytanoyl-CoA dioxygenase (PhyH) DSM104440_RS11735 PF00005 ABC transporter DSM104440_RS11740 PF13472 GDSL-like Lipase/Acylhydrolase family DSM104440_RS11745 PF00581 Rhodanese-like domain DSM104440_RS11750 PF03793 PASTA domain DSM104440_RS11750 PF00069 Protein kinase domain DSM104440_RS11755 PF02542 YgbB family DSM104440_RS11760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DSM104440_RS11765 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSM104440_RS11765 PF01464 Transglycosylase SLT domain DSM104440_RS11770 PF00300 Histidine phosphatase superfamily (branch 1) DSM104440_RS11775 PF02403 Seryl-tRNA synthetase N-terminal domain DSM104440_RS11775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSM104440_RS11780 PF16193 AAA C-terminal domain DSM104440_RS11780 PF12002 MgsA AAA+ ATPase C terminal DSM104440_RS11780 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS11785 PF03466 LysR substrate binding domain DSM104440_RS11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS11795 PF08546 Ketopantoate reductase PanE/ApbA C terminal DSM104440_RS11795 PF02558 Ketopantoate reductase PanE/ApbA DSM104440_RS11800 PF00464 Serine hydroxymethyltransferase DSM104440_RS11805 PF00266 Aminotransferase class-V DSM104440_RS11810 PF03548 Outer membrane lipoprotein carrier protein LolA DSM104440_RS11815 PF01580 FtsK/SpoIIIE family DSM104440_RS11815 PF09397 Ftsk gamma domain DSM104440_RS11815 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DSM104440_RS11815 PF17854 FtsK alpha domain DSM104440_RS11820 PF13545 Crp-like helix-turn-helix domain DSM104440_RS11820 PF00027 Cyclic nucleotide-binding domain DSM104440_RS11825 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS11835 PF00731 AIR carboxylase DSM104440_RS11840 PF02222 ATP-grasp domain DSM104440_RS11840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DSM104440_RS11850 PF06167 Glucose-regulated metallo-peptidase M90 DSM104440_RS11865 PF00543 Nitrogen regulatory protein P-II DSM104440_RS11870 PF00795 Carbon-nitrogen hydrolase DSM104440_RS11870 PF02540 NAD synthase DSM104440_RS11885 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS11890 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS11895 PF02515 CoA-transferase family III DSM104440_RS11900 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS11905 PF10531 SLBB domain DSM104440_RS11915 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS11920 PF00294 pfkB family carbohydrate kinase DSM104440_RS11925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DSM104440_RS11925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DSM104440_RS11925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DSM104440_RS11930 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DSM104440_RS11935 PF18073 Rubredoxin metal binding domain DSM104440_RS11955 PF00535 Glycosyl transferase family 2 DSM104440_RS11960 PF00216 Bacterial DNA-binding protein DSM104440_RS11965 PF00575 S1 RNA binding domain DSM104440_RS11970 PF02224 Cytidylate kinase DSM104440_RS11975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DSM104440_RS11980 PF01842 ACT domain DSM104440_RS11980 PF02153 Prephenate dehydrogenase DSM104440_RS11985 PF00155 Aminotransferase class I and II DSM104440_RS11990 PF01817 Chorismate mutase type II DSM104440_RS11990 PF01842 ACT domain DSM104440_RS11990 PF00800 Prephenate dehydratase DSM104440_RS11995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS11995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS11995 PF01842 ACT domain DSM104440_RS12000 PF00266 Aminotransferase class-V DSM104440_RS12005 PF00521 DNA gyrase/topoisomerase IV, subunit A DSM104440_RS12005 PF03989 DNA gyrase C-terminal domain, beta-propeller DSM104440_RS12010 PF00691 OmpA family DSM104440_RS12015 PF01979 Amidohydrolase family DSM104440_RS12025 PF13419 Haloacid dehalogenase-like hydrolase DSM104440_RS12040 PF08323 Starch synthase catalytic domain DSM104440_RS12040 PF00534 Glycosyl transferases group 1 DSM104440_RS12045 PF00535 Glycosyl transferase family 2 DSM104440_RS12050 PF14307 Glycosyltransferase WbsX DSM104440_RS12050 PF05045 Rhamnan synthesis protein F DSM104440_RS12060 PF00672 HAMP domain DSM104440_RS12060 PF02743 Cache domain DSM104440_RS12060 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS12070 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS12070 PF00931 NB-ARC domain DSM104440_RS12070 PF03704 Bacterial transcriptional activator domain DSM104440_RS12090 PF01434 Peptidase family M41 DSM104440_RS12090 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS12090 PF17862 AAA+ lid domain DSM104440_RS12105 PF00080 Copper/zinc superoxide dismutase (SODC) DSM104440_RS12115 PF01292 Prokaryotic cytochrome b561 DSM104440_RS12125 PF13247 4Fe-4S dicluster domain DSM104440_RS12130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSM104440_RS12130 PF00384 Molybdopterin oxidoreductase DSM104440_RS12130 PF01568 Molydopterin dinucleotide binding domain DSM104440_RS12160 PF06463 Molybdenum Cofactor Synthesis C DSM104440_RS12160 PF04055 Radical SAM superfamily DSM104440_RS12165 PF02634 FdhD/NarQ family DSM104440_RS12175 PF12804 MobA-like NTP transferase domain DSM104440_RS12185 PF03453 MoeA N-terminal region (domain I and II) DSM104440_RS12185 PF03454 MoeA C-terminal region (domain IV) DSM104440_RS12185 PF00994 Probable molybdopterin binding domain DSM104440_RS12195 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS12195 PF08359 YsiA-like protein, C-terminal region DSM104440_RS12200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS12205 PF00873 AcrB/AcrD/AcrF family DSM104440_RS12220 PF03466 LysR substrate binding domain DSM104440_RS12220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS12225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DSM104440_RS12225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DSM104440_RS12235 PF01507 Phosphoadenosine phosphosulfate reductase family DSM104440_RS12240 PF01507 Phosphoadenosine phosphosulfate reductase family DSM104440_RS12245 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS12250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DSM104440_RS12260 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS12265 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS12270 PF17850 CysA C-terminal regulatory domain DSM104440_RS12270 PF12857 TOBE-like domain DSM104440_RS12270 PF00005 ABC transporter DSM104440_RS12275 PF00175 Oxidoreductase NAD-binding domain DSM104440_RS12275 PF00970 Oxidoreductase FAD-binding domain DSM104440_RS12285 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) DSM104440_RS12295 PF00034 Cytochrome c DSM104440_RS12300 PF03264 NapC/NirT cytochrome c family, N-terminal region DSM104440_RS12325 PF06463 Molybdenum Cofactor Synthesis C DSM104440_RS12325 PF04055 Radical SAM superfamily DSM104440_RS12335 PF02335 Cytochrome c552 DSM104440_RS12340 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DSM104440_RS12345 PF04376 Arginine-tRNA-protein transferase, N terminus DSM104440_RS12345 PF04377 Arginine-tRNA-protein transferase, C terminus DSM104440_RS12350 PF01180 Dihydroorotate dehydrogenase DSM104440_RS12355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DSM104440_RS12355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DSM104440_RS12360 PF04060 Putative Fe-S cluster DSM104440_RS12365 PF10576 Iron-sulfur binding domain of endonuclease III DSM104440_RS12365 PF00730 HhH-GPD superfamily base excision DNA repair protein DSM104440_RS12365 PF00633 Helix-hairpin-helix motif DSM104440_RS12395 PF04545 Sigma-70, region 4 DSM104440_RS12395 PF04542 Sigma-70 region 2 DSM104440_RS12400 PF08448 PAS fold DSM104440_RS12400 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS12400 PF00563 EAL domain DSM104440_RS12405 PF00929 Exonuclease DSM104440_RS12410 PF00075 RNase H DSM104440_RS12420 PF16123 Hydroxyacylglutathione hydrolase C-terminus DSM104440_RS12420 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS12450 PF01476 LysM domain DSM104440_RS12450 PF01464 Transglycosylase SLT domain DSM104440_RS12455 PF01432 Peptidase family M3 DSM104440_RS12460 PF00005 ABC transporter DSM104440_RS12460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSM104440_RS12470 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS12475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS12480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS12510 PF05362 Lon protease (S16) C-terminal proteolytic domain DSM104440_RS12510 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS12510 PF02190 ATP-dependent protease La (LON) substrate-binding domain DSM104440_RS12515 PF10431 C-terminal, D2-small domain, of ClpB protein DSM104440_RS12515 PF06689 ClpX C4-type zinc finger DSM104440_RS12515 PF07724 AAA domain (Cdc48 subfamily) DSM104440_RS12520 PF00574 Clp protease DSM104440_RS12525 PF05697 Bacterial trigger factor protein (TF) DSM104440_RS12525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSM104440_RS12525 PF05698 Bacterial trigger factor protein (TF) C-terminus DSM104440_RS12545 PF01593 Flavin containing amine oxidoreductase DSM104440_RS12550 PF00106 short chain dehydrogenase DSM104440_RS12565 PF00069 Protein kinase domain DSM104440_RS12565 PF03793 PASTA domain DSM104440_RS12570 PF18073 Rubredoxin metal binding domain DSM104440_RS12575 PF00842 Alanine racemase, C-terminal domain DSM104440_RS12575 PF01168 Alanine racemase, N-terminal domain DSM104440_RS12580 PF03796 DnaB-like helicase C terminal domain DSM104440_RS12580 PF00772 DnaB-like helicase N terminal domain DSM104440_RS12585 PF03948 Ribosomal protein L9, C-terminal domain DSM104440_RS12585 PF01281 Ribosomal protein L9, N-terminal domain DSM104440_RS12590 PF01084 Ribosomal protein S18 DSM104440_RS12600 PF01250 Ribosomal protein S6 DSM104440_RS12605 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS12625 PF13614 AAA domain DSM104440_RS12640 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DSM104440_RS12655 PF00534 Glycosyl transferases group 1 DSM104440_RS12655 PF13439 Glycosyltransferase Family 4 DSM104440_RS12660 PF04321 RmlD substrate binding domain DSM104440_RS12675 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS12685 PF01451 Low molecular weight phosphotyrosine protein phosphatase DSM104440_RS12690 PF01050 Mannose-6-phosphate isomerase DSM104440_RS12690 PF00483 Nucleotidyl transferase DSM104440_RS12700 PF17843 MycE methyltransferase N-terminal DSM104440_RS12705 PF17843 MycE methyltransferase N-terminal DSM104440_RS12710 PF05193 Peptidase M16 inactive domain DSM104440_RS12710 PF00675 Insulinase (Peptidase family M16) DSM104440_RS12715 PF00588 SpoU rRNA Methylase family DSM104440_RS12715 PF08032 RNA 2'-O ribose methyltransferase substrate binding DSM104440_RS12720 PF00575 S1 RNA binding domain DSM104440_RS12720 PF00773 RNB domain DSM104440_RS12720 PF17876 Cold shock domain DSM104440_RS12720 PF08461 Ribonuclease R winged-helix domain DSM104440_RS12720 PF08206 Ribonuclease B OB domain DSM104440_RS12735 PF00709 Adenylosuccinate synthetase DSM104440_RS12740 PF13393 Histidyl-tRNA synthetase DSM104440_RS12750 PF01145 SPFH domain / Band 7 family DSM104440_RS12755 PF12221 Bacterial membrane protein N terminal DSM104440_RS12755 PF01145 SPFH domain / Band 7 family DSM104440_RS12760 PF16360 GTP-binding GTPase Middle Region DSM104440_RS12760 PF01926 50S ribosome-binding GTPase DSM104440_RS12760 PF13167 GTP-binding GTPase N-terminal DSM104440_RS12765 PF17209 Hfq protein DSM104440_RS12770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DSM104440_RS12770 PF01926 50S ribosome-binding GTPase DSM104440_RS12775 PF13360 PQQ-like domain DSM104440_RS12780 PF09976 Tetratricopeptide repeat-like domain DSM104440_RS12785 PF03129 Anticodon binding domain DSM104440_RS12785 PF13393 Histidyl-tRNA synthetase DSM104440_RS12790 PF04551 GcpE protein DSM104440_RS12795 PF13464 Domain of unknown function (DUF4115) DSM104440_RS12805 PF04055 Radical SAM superfamily DSM104440_RS12810 PF00334 Nucleoside diphosphate kinase DSM104440_RS12815 PF09179 TilS substrate binding domain DSM104440_RS12815 PF11734 TilS substrate C-terminal domain DSM104440_RS12815 PF01171 PP-loop family DSM104440_RS12820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DSM104440_RS12825 PF01923 Cobalamin adenosyltransferase DSM104440_RS12830 PF04545 Sigma-70, region 4 DSM104440_RS12830 PF04542 Sigma-70 region 2 DSM104440_RS12845 PF01497 Periplasmic binding protein DSM104440_RS12850 PF00793 DAHP synthetase I family DSM104440_RS12850 PF18152 DAHP synthase ferredoxin-like domain DSM104440_RS12855 PF00793 DAHP synthetase I family DSM104440_RS12860 PF00793 DAHP synthetase I family DSM104440_RS12875 PF00550 Phosphopantetheine attachment site DSM104440_RS12880 PF07977 FabA-like domain DSM104440_RS12900 PF02801 Beta-ketoacyl synthase, C-terminal domain DSM104440_RS12900 PF00109 Beta-ketoacyl synthase, N-terminal domain DSM104440_RS12925 PF01641 SelR domain DSM104440_RS12935 PF01523 Putative modulator of DNA gyrase DSM104440_RS12940 PF00795 Carbon-nitrogen hydrolase DSM104440_RS12950 PF03710 Glutamate-ammonia ligase adenylyltransferase DSM104440_RS12950 PF08335 GlnD PII-uridylyltransferase DSM104440_RS12955 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS12960 PF01063 Amino-transferase class IV DSM104440_RS12970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSM104440_RS12990 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS12995 PF00072 Response regulator receiver domain DSM104440_RS13020 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS13020 PF01799 [2Fe-2S] binding domain DSM104440_RS13025 PF11647 Membrane Localization Domain DSM104440_RS13025 PF12146 Serine aminopeptidase, S33 DSM104440_RS13025 PF16671 Actin cross-linking domain DSM104440_RS13025 PF07634 RtxA repeat DSM104440_RS13025 PF11713 Peptidase C80 family DSM104440_RS13035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DSM104440_RS13040 PF01799 [2Fe-2S] binding domain DSM104440_RS13040 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS13050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS13060 PF03958 Bacterial type II/III secretion system short domain DSM104440_RS13060 PF00263 Bacterial type II and III secretion system protein DSM104440_RS13065 PF00437 Type II/IV secretion system protein DSM104440_RS13075 PF00482 Type II secretion system (T2SS), protein F DSM104440_RS13080 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS13080 PF08334 Type II secretion system (T2SS), protein G DSM104440_RS13090 PF02501 Type II secretion system (T2SS), protein I DSM104440_RS13090 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS13095 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS13095 PF11612 Type II secretion system (T2SS), protein J DSM104440_RS13115 PF00561 alpha/beta hydrolase fold DSM104440_RS13120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DSM104440_RS13120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DSM104440_RS13120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DSM104440_RS13120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DSM104440_RS13130 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS13130 PF00072 Response regulator receiver domain DSM104440_RS13145 PF00561 alpha/beta hydrolase fold DSM104440_RS13190 PF13417 Glutathione S-transferase, N-terminal domain DSM104440_RS13190 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS13210 PF00293 NUDIX domain DSM104440_RS13215 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS13215 PF14497 Glutathione S-transferase, C-terminal domain DSM104440_RS13220 PF04542 Sigma-70 region 2 DSM104440_RS13220 PF08281 Sigma-70, region 4 DSM104440_RS13255 PF00326 Prolyl oligopeptidase family DSM104440_RS13255 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DSM104440_RS13260 PF00005 ABC transporter DSM104440_RS13260 PF00664 ABC transporter transmembrane region DSM104440_RS13290 PF00144 Beta-lactamase DSM104440_RS13310 PF01625 Peptide methionine sulfoxide reductase DSM104440_RS13315 PF09997 Predicted membrane protein (DUF2238) DSM104440_RS13320 PF00480 ROK family DSM104440_RS13325 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS13325 PF00563 EAL domain DSM104440_RS13325 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS13335 PF01219 Prokaryotic diacylglycerol kinase DSM104440_RS13340 PF00534 Glycosyl transferases group 1 DSM104440_RS13340 PF13439 Glycosyltransferase Family 4 DSM104440_RS13355 PF01425 Amidase DSM104440_RS13360 PF02600 Disulfide bond formation protein DsbB DSM104440_RS13365 PF16655 PhoD-like phosphatase, N-terminal domain DSM104440_RS13365 PF09423 PhoD-like phosphatase DSM104440_RS13380 PF00106 short chain dehydrogenase DSM104440_RS13420 PF02705 K+ potassium transporter DSM104440_RS13440 PF02586 SOS response associated peptidase (SRAP) DSM104440_RS13445 PF00194 Eukaryotic-type carbonic anhydrase DSM104440_RS13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS13455 PF03466 LysR substrate binding domain DSM104440_RS13480 PF00999 Sodium/hydrogen exchanger family DSM104440_RS13480 PF02254 TrkA-N domain DSM104440_RS13485 PF01132 Elongation factor P (EF-P) OB domain DSM104440_RS13485 PF09285 Elongation factor P, C-terminal DSM104440_RS13485 PF08207 Elongation factor P (EF-P) KOW-like domain DSM104440_RS13500 PF02321 Outer membrane efflux protein DSM104440_RS13500 PF08139 Prokaryotic membrane lipoprotein lipid attachment site DSM104440_RS13505 PF00873 AcrB/AcrD/AcrF family DSM104440_RS13510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS13510 PF00529 HlyD membrane-fusion protein of T1SS DSM104440_RS13515 PF08361 MAATS-type transcriptional repressor, C-terminal region DSM104440_RS13515 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS13520 PF00561 alpha/beta hydrolase fold DSM104440_RS13540 PF00313 'Cold-shock' DNA-binding domain DSM104440_RS13550 PF00114 Pilin (bacterial filament) DSM104440_RS13550 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS13555 PF01336 OB-fold nucleic acid binding domain DSM104440_RS13555 PF00152 tRNA synthetases class II (D, K and N) DSM104440_RS13560 PF00873 AcrB/AcrD/AcrF family DSM104440_RS13565 PF13533 Biotin-lipoyl like DSM104440_RS13570 PF01546 Peptidase family M20/M25/M40 DSM104440_RS13575 PF13091 PLD-like domain DSM104440_RS13575 PF13396 Phospholipase_D-nuclease N-terminal DSM104440_RS13580 PF13472 GDSL-like Lipase/Acylhydrolase family DSM104440_RS13590 PF07690 Major Facilitator Superfamily DSM104440_RS13595 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS13605 PF07152 YaeQ protein DSM104440_RS13610 PF01717 Cobalamin-independent synthase, Catalytic domain DSM104440_RS13610 PF08267 Cobalamin-independent synthase, N-terminal domain DSM104440_RS13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS13615 PF03466 LysR substrate binding domain DSM104440_RS13620 PF02622 Uncharacterized ACR, COG1678 DSM104440_RS13625 PF02743 Cache domain DSM104440_RS13625 PF06580 Histidine kinase DSM104440_RS13625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS13625 PF00672 HAMP domain DSM104440_RS13630 PF00072 Response regulator receiver domain DSM104440_RS13630 PF04397 LytTr DNA-binding domain DSM104440_RS13635 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS13635 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS13640 PF01638 HxlR-like helix-turn-helix DSM104440_RS13650 PF00067 Cytochrome P450 DSM104440_RS13650 PF00175 Oxidoreductase NAD-binding domain DSM104440_RS13650 PF00258 Flavodoxin DSM104440_RS13650 PF00667 FAD binding domain DSM104440_RS13665 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS13675 PF03358 NADPH-dependent FMN reductase DSM104440_RS13710 PF00497 Bacterial extracellular solute-binding proteins, family 3 DSM104440_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS13725 PF00005 ABC transporter DSM104440_RS13730 PF01546 Peptidase family M20/M25/M40 DSM104440_RS13730 PF07687 Peptidase dimerisation domain DSM104440_RS13735 PF07687 Peptidase dimerisation domain DSM104440_RS13735 PF01546 Peptidase family M20/M25/M40 DSM104440_RS13745 PF02678 Pirin DSM104440_RS13745 PF05726 Pirin C-terminal cupin domain DSM104440_RS13750 PF00270 DEAD/DEAH box helicase DSM104440_RS13750 PF00271 Helicase conserved C-terminal domain DSM104440_RS13760 PF01554 MatE DSM104440_RS13770 PF16320 Ribosomal protein L7/L12 dimerisation domain DSM104440_RS13770 PF00542 Ribosomal protein L7/L12 C-terminal domain DSM104440_RS13790 PF00561 alpha/beta hydrolase fold DSM104440_RS13800 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS13800 PF17862 AAA+ lid domain DSM104440_RS13800 PF01434 Peptidase family M41 DSM104440_RS13810 PF01139 tRNA-splicing ligase RtcB DSM104440_RS13815 PF03795 YCII-related domain DSM104440_RS13820 PF07690 Major Facilitator Superfamily DSM104440_RS13830 PF00440 Bacterial regulatory proteins, tetR family DSM104440_RS13835 PF13533 Biotin-lipoyl like DSM104440_RS13840 PF00873 AcrB/AcrD/AcrF family DSM104440_RS13845 PF02321 Outer membrane efflux protein DSM104440_RS13850 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS13855 PF14698 Argininosuccinate lyase C-terminal DSM104440_RS13855 PF00206 Lyase DSM104440_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS13865 PF03466 LysR substrate binding domain DSM104440_RS13870 PF00180 Isocitrate/isopropylmalate dehydrogenase DSM104440_RS13895 PF01555 DNA methylase DSM104440_RS13900 PF00268 Ribonucleotide reductase, small chain DSM104440_RS13910 PF00317 Ribonucleotide reductase, all-alpha domain DSM104440_RS13910 PF02867 Ribonucleotide reductase, barrel domain DSM104440_RS13910 PF03477 ATP cone domain DSM104440_RS13925 PF00882 Zinc dependent phospholipase C DSM104440_RS13955 PF02321 Outer membrane efflux protein DSM104440_RS13960 PF00873 AcrB/AcrD/AcrF family DSM104440_RS13965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS13965 PF00529 HlyD membrane-fusion protein of T1SS DSM104440_RS13970 PF01510 N-acetylmuramoyl-L-alanine amidase DSM104440_RS13975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS13975 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS13990 PF00072 Response regulator receiver domain DSM104440_RS13990 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS14005 PF00348 Polyprenyl synthetase DSM104440_RS14010 PF00829 Ribosomal prokaryotic L21 protein DSM104440_RS14015 PF01016 Ribosomal L27 protein DSM104440_RS14020 PF01810 LysE type translocator DSM104440_RS14025 PF01018 GTP1/OBG DSM104440_RS14025 PF01926 50S ribosome-binding GTPase DSM104440_RS14030 PF00696 Amino acid kinase family DSM104440_RS14030 PF01472 PUA domain DSM104440_RS14050 PF04893 Yip1 domain DSM104440_RS14055 PF00293 NUDIX domain DSM104440_RS14060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DSM104440_RS14060 PF03129 Anticodon binding domain DSM104440_RS14060 PF04073 Aminoacyl-tRNA editing domain DSM104440_RS14065 PF01464 Transglycosylase SLT domain DSM104440_RS14065 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DSM104440_RS14070 PF00578 AhpC/TSA family DSM104440_RS14080 PF03631 Virulence factor BrkB DSM104440_RS14095 PF09335 SNARE associated Golgi protein DSM104440_RS14100 PF07549 SecD/SecF GG Motif DSM104440_RS14100 PF02355 Protein export membrane protein DSM104440_RS14105 PF02355 Protein export membrane protein DSM104440_RS14105 PF13721 SecD export protein N-terminal TM region DSM104440_RS14105 PF07549 SecD/SecF GG Motif DSM104440_RS14110 PF02699 Preprotein translocase subunit DSM104440_RS14115 PF01702 Queuine tRNA-ribosyltransferase DSM104440_RS14125 PF03030 Inorganic H+ pyrophosphatase DSM104440_RS14130 PF00365 Phosphofructokinase DSM104440_RS14135 PF05191 Adenylate kinase, active site lid DSM104440_RS14140 PF02348 Cytidylyltransferase DSM104440_RS14145 PF03966 Trm112p-like protein DSM104440_RS14150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DSM104440_RS14165 PF02601 Exonuclease VII, large subunit DSM104440_RS14165 PF13742 OB-fold nucleic acid binding domain DSM104440_RS14170 PF07311 Dodecin DSM104440_RS14180 PF08676 MutL C terminal dimerisation domain DSM104440_RS14180 PF01119 DNA mismatch repair protein, C-terminal domain DSM104440_RS14185 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS14185 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS14185 PF00563 EAL domain DSM104440_RS14190 PF11741 AMIN domain DSM104440_RS14190 PF01520 N-acetylmuramoyl-L-alanine amidase DSM104440_RS14195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DSM104440_RS14200 PF08331 Domain of unknown function (DUF1730) DSM104440_RS14225 PF07995 Glucose / Sorbosone dehydrogenase DSM104440_RS14230 PF01565 FAD binding domain DSM104440_RS14240 PF00205 Thiamine pyrophosphate enzyme, central domain DSM104440_RS14240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSM104440_RS14240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS14245 PF01963 TraB family DSM104440_RS14250 PF03449 Transcription elongation factor, N-terminal DSM104440_RS14250 PF01272 Transcription elongation factor, GreA/GreB, C-term DSM104440_RS14255 PF01914 MarC family integral membrane protein DSM104440_RS14260 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS14270 PF04977 Septum formation initiator DSM104440_RS14275 PF00113 Enolase, C-terminal TIM barrel domain DSM104440_RS14275 PF03952 Enolase, N-terminal domain DSM104440_RS14310 PF00883 Cytosol aminopeptidase family, catalytic domain DSM104440_RS14310 PF02789 Cytosol aminopeptidase family, N-terminal domain DSM104440_RS14335 PF08241 Methyltransferase domain DSM104440_RS14345 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS14345 PF00593 TonB dependent receptor DSM104440_RS14355 PF04973 Nicotinamide mononucleotide transporter DSM104440_RS14380 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DSM104440_RS14385 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS14385 PF01799 [2Fe-2S] binding domain DSM104440_RS14395 PF00732 GMC oxidoreductase DSM104440_RS14395 PF05199 GMC oxidoreductase DSM104440_RS14410 PF00672 HAMP domain DSM104440_RS14410 PF00909 Ammonium Transporter Family DSM104440_RS14425 PF00793 DAHP synthetase I family DSM104440_RS14430 PF00117 Glutamine amidotransferase class-I DSM104440_RS14430 PF06418 CTP synthase N-terminus DSM104440_RS14445 PF01008 Initiation factor 2 subunit family DSM104440_RS14450 PF00596 Class II Aldolase and Adducin N-terminal domain DSM104440_RS14460 PF01266 FAD dependent oxidoreductase DSM104440_RS14465 PF16701 Adenylate cyclase regulatory domain DSM104440_RS14465 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS14470 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DSM104440_RS14470 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DSM104440_RS14485 PF07687 Peptidase dimerisation domain DSM104440_RS14485 PF01546 Peptidase family M20/M25/M40 DSM104440_RS14505 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS14520 PF01042 Endoribonuclease L-PSP DSM104440_RS14530 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS14530 PF13291 ACT domain DSM104440_RS14535 PF01266 FAD dependent oxidoreductase DSM104440_RS14550 PF00342 Phosphoglucose isomerase DSM104440_RS14555 PF00072 Response regulator receiver domain DSM104440_RS14555 PF00672 HAMP domain DSM104440_RS14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS14555 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS14555 PF17149 Periplasmic sensor domain found in signal transduction proteins DSM104440_RS14555 PF01627 Hpt domain DSM104440_RS14560 PF07859 alpha/beta hydrolase fold DSM104440_RS14600 PF01266 FAD dependent oxidoreductase DSM104440_RS14600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DSM104440_RS14605 PF00293 NUDIX domain DSM104440_RS14610 PF00361 Proton-conducting membrane transporter DSM104440_RS14615 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DSM104440_RS14615 PF00361 Proton-conducting membrane transporter DSM104440_RS14620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DSM104440_RS14620 PF00361 Proton-conducting membrane transporter DSM104440_RS14625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DSM104440_RS14630 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DSM104440_RS14635 PF12838 4Fe-4S dicluster domain DSM104440_RS14640 PF00146 NADH dehydrogenase DSM104440_RS14645 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DSM104440_RS14645 PF00384 Molybdopterin oxidoreductase DSM104440_RS14645 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DSM104440_RS14650 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSM104440_RS14650 PF10531 SLBB domain DSM104440_RS14650 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSM104440_RS14665 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DSM104440_RS14670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DSM104440_RS14675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DSM104440_RS14680 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DSM104440_RS14690 PF03840 Preprotein translocase SecG subunit DSM104440_RS14695 PF00121 Triosephosphate isomerase DSM104440_RS14715 PF01758 Sodium Bile acid symporter family DSM104440_RS14725 PF00005 ABC transporter DSM104440_RS14730 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS14735 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS14740 PF12849 PBP superfamily domain DSM104440_RS14745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DSM104440_RS14745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DSM104440_RS14745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DSM104440_RS14745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DSM104440_RS14750 PF00809 Pterin binding enzyme DSM104440_RS14755 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS14755 PF17862 AAA+ lid domain DSM104440_RS14755 PF06480 FtsH Extracellular DSM104440_RS14755 PF01434 Peptidase family M41 DSM104440_RS14760 PF01728 FtsJ-like methyltransferase DSM104440_RS14770 PF03449 Transcription elongation factor, N-terminal DSM104440_RS14770 PF01272 Transcription elongation factor, GreA/GreB, C-term DSM104440_RS14775 PF02142 MGS-like domain DSM104440_RS14775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DSM104440_RS14775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSM104440_RS14780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DSM104440_RS14780 PF00117 Glutamine amidotransferase class-I DSM104440_RS14785 PF01773 Na+ dependent nucleoside transporter N-terminus DSM104440_RS14785 PF07670 Nucleoside recognition DSM104440_RS14785 PF07662 Na+ dependent nucleoside transporter C-terminus DSM104440_RS14790 PF01113 Dihydrodipicolinate reductase, N-terminus DSM104440_RS14790 PF05173 Dihydrodipicolinate reductase, C-terminus DSM104440_RS14795 PF04355 SmpA / OmlA family DSM104440_RS14800 PF01475 Ferric uptake regulator family DSM104440_RS14805 PF00545 ribonuclease DSM104440_RS14815 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DSM104440_RS14815 PF01619 Proline dehydrogenase DSM104440_RS14815 PF00171 Aldehyde dehydrogenase family DSM104440_RS14815 PF14850 DNA-binding domain of Proline dehydrogenase DSM104440_RS14820 PF00085 Thioredoxin DSM104440_RS14825 PF00210 Ferritin-like domain DSM104440_RS14845 PF17954 Quercetinase C-terminal cupin domain DSM104440_RS14845 PF02678 Pirin DSM104440_RS14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS14850 PF03466 LysR substrate binding domain DSM104440_RS14855 PF00749 tRNA synthetases class I (E and Q), catalytic domain DSM104440_RS14865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS14870 PF00873 AcrB/AcrD/AcrF family DSM104440_RS14885 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS14890 PF13419 Haloacid dehalogenase-like hydrolase DSM104440_RS14905 PF03793 PASTA domain DSM104440_RS14905 PF00069 Protein kinase domain DSM104440_RS14915 PF01970 Tripartite tricarboxylate transporter TctA family DSM104440_RS14925 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS14930 PF00180 Isocitrate/isopropylmalate dehydrogenase DSM104440_RS14935 PF00561 alpha/beta hydrolase fold DSM104440_RS14940 PF13193 AMP-binding enzyme C-terminal domain DSM104440_RS14940 PF00501 AMP-binding enzyme DSM104440_RS14950 PF03793 PASTA domain DSM104440_RS14950 PF00069 Protein kinase domain DSM104440_RS14960 PF01479 S4 domain DSM104440_RS14990 PF01161 Phosphatidylethanolamine-binding protein DSM104440_RS14995 PF05697 Bacterial trigger factor protein (TF) DSM104440_RS14995 PF05698 Bacterial trigger factor protein (TF) C-terminus DSM104440_RS14995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DSM104440_RS15005 PF00171 Aldehyde dehydrogenase family DSM104440_RS15010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS15020 PF00563 EAL domain DSM104440_RS15020 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS15020 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS15030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS15045 PF13649 Methyltransferase domain DSM104440_RS15055 PF08031 Berberine and berberine like DSM104440_RS15055 PF01565 FAD binding domain DSM104440_RS15060 PF01638 HxlR-like helix-turn-helix DSM104440_RS15065 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DSM104440_RS15075 PF04209 homogentisate 1,2-dioxygenase DSM104440_RS15080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DSM104440_RS15085 PF01037 Lrp/AsnC ligand binding domain DSM104440_RS15100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS15105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DSM104440_RS15110 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS15115 PF12911 N-terminal TM domain of oligopeptide transport permease C DSM104440_RS15130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSM104440_RS15130 PF00005 ABC transporter DSM104440_RS15135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DSM104440_RS15135 PF00005 ABC transporter DSM104440_RS15150 PF03062 MBOAT, membrane-bound O-acyltransferase family DSM104440_RS15165 PF00155 Aminotransferase class I and II DSM104440_RS15170 PF00271 Helicase conserved C-terminal domain DSM104440_RS15170 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DSM104440_RS15170 PF11898 Domain of unknown function (DUF3418) DSM104440_RS15170 PF04408 Helicase associated domain (HA2) DSM104440_RS15170 PF00270 DEAD/DEAH box helicase DSM104440_RS15185 PF08281 Sigma-70, region 4 DSM104440_RS15185 PF04542 Sigma-70 region 2 DSM104440_RS15200 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS15200 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS15205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DSM104440_RS15205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DSM104440_RS15210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DSM104440_RS15210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DSM104440_RS15230 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS15240 PF02589 LUD domain DSM104440_RS15245 PF02589 LUD domain DSM104440_RS15245 PF13183 4Fe-4S dicluster domain DSM104440_RS15245 PF11870 Domain of unknown function (DUF3390) DSM104440_RS15250 PF02754 Cysteine-rich domain DSM104440_RS15255 PF01551 Peptidase family M23 DSM104440_RS15255 PF10145 Phage-related minor tail protein DSM104440_RS15255 PF01464 Transglycosylase SLT domain DSM104440_RS15260 PF00768 D-alanyl-D-alanine carboxypeptidase DSM104440_RS15265 PF01053 Cys/Met metabolism PLP-dependent enzyme DSM104440_RS15270 PF00561 alpha/beta hydrolase fold DSM104440_RS15275 PF00005 ABC transporter DSM104440_RS15275 PF00664 ABC transporter transmembrane region DSM104440_RS15280 PF07883 Cupin domain DSM104440_RS15305 PF12697 Alpha/beta hydrolase family DSM104440_RS15315 PF00593 TonB dependent receptor DSM104440_RS15315 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS15330 PF01261 Xylose isomerase-like TIM barrel DSM104440_RS15335 PF00595 PDZ domain DSM104440_RS15365 PF01168 Alanine racemase, N-terminal domain DSM104440_RS15365 PF14031 Putative serine dehydratase domain DSM104440_RS15370 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS15375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DSM104440_RS15375 PF12838 4Fe-4S dicluster domain DSM104440_RS15375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DSM104440_RS15375 PF01568 Molydopterin dinucleotide binding domain DSM104440_RS15375 PF00384 Molybdopterin oxidoreductase DSM104440_RS15380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DSM104440_RS15380 PF10531 SLBB domain DSM104440_RS15380 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DSM104440_RS15385 PF00571 CBS domain DSM104440_RS15390 PF11490 DNA polymerase III polC-type N-terminus II DSM104440_RS15390 PF07733 Bacterial DNA polymerase III alpha NTPase domain DSM104440_RS15390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DSM104440_RS15390 PF14579 Helix-hairpin-helix motif DSM104440_RS15390 PF02811 PHP domain DSM104440_RS15390 PF00929 Exonuclease DSM104440_RS15395 PF00549 CoA-ligase DSM104440_RS15395 PF02629 CoA binding domain DSM104440_RS15400 PF00549 CoA-ligase DSM104440_RS15400 PF08442 ATP-grasp domain DSM104440_RS15410 PF00069 Protein kinase domain DSM104440_RS15410 PF03793 PASTA domain DSM104440_RS15425 PF00107 Zinc-binding dehydrogenase DSM104440_RS15425 PF08240 Alcohol dehydrogenase GroES-like domain DSM104440_RS15430 PF00551 Formyl transferase DSM104440_RS15430 PF02911 Formyl transferase, C-terminal domain DSM104440_RS15435 PF02515 CoA-transferase family III DSM104440_RS15440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DSM104440_RS15440 PF00205 Thiamine pyrophosphate enzyme, central domain DSM104440_RS15440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DSM104440_RS15455 PF01970 Tripartite tricarboxylate transporter TctA family DSM104440_RS15470 PF03741 Integral membrane protein TerC family DSM104440_RS15475 PF14718 Soluble lytic murein transglycosylase L domain DSM104440_RS15475 PF01464 Transglycosylase SLT domain DSM104440_RS15485 PF01966 HD domain DSM104440_RS15485 PF01743 Poly A polymerase head domain DSM104440_RS15485 PF12627 Probable RNA and SrmB- binding site of polymerase A DSM104440_RS15500 PF16868 NMT1-like family DSM104440_RS15505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DSM104440_RS15505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DSM104440_RS15505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DSM104440_RS15510 PF02233 NAD(P) transhydrogenase beta subunit DSM104440_RS15525 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS15525 PF00072 Response regulator receiver domain DSM104440_RS15530 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS15570 PF01171 PP-loop family DSM104440_RS15585 PF00266 Aminotransferase class-V DSM104440_RS15605 PF01435 Peptidase family M48 DSM104440_RS15620 PF02219 Methylenetetrahydrofolate reductase DSM104440_RS15630 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DSM104440_RS15630 PF05221 S-adenosyl-L-homocysteine hydrolase DSM104440_RS15635 PF13417 Glutathione S-transferase, N-terminal domain DSM104440_RS15660 PF05121 Gas vesicle protein K DSM104440_RS15660 PF00741 Gas vesicle protein DSM104440_RS15680 PF00741 Gas vesicle protein DSM104440_RS15685 PF00741 Gas vesicle protein DSM104440_RS15690 PF02773 S-adenosylmethionine synthetase, C-terminal domain DSM104440_RS15690 PF02772 S-adenosylmethionine synthetase, central domain DSM104440_RS15690 PF00438 S-adenosylmethionine synthetase, N-terminal domain DSM104440_RS15700 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS15710 PF03279 Bacterial lipid A biosynthesis acyltransferase DSM104440_RS15715 PF01678 Diaminopimelate epimerase DSM104440_RS15725 PF00589 Phage integrase family DSM104440_RS15725 PF02899 Phage integrase, N-terminal SAM-like domain DSM104440_RS15730 PF07683 Cobalamin synthesis protein cobW C-terminal domain DSM104440_RS15730 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSM104440_RS15735 PF07683 Cobalamin synthesis protein cobW C-terminal domain DSM104440_RS15735 PF02492 CobW/HypB/UreG, nucleotide-binding domain DSM104440_RS15745 PF00227 Proteasome subunit DSM104440_RS15750 PF10431 C-terminal, D2-small domain, of ClpB protein DSM104440_RS15750 PF07724 AAA domain (Cdc48 subfamily) DSM104440_RS15750 PF00004 ATPase family associated with various cellular activities (AAA) DSM104440_RS15770 PF05114 Protein of unknown function (DUF692) DSM104440_RS15785 PF00011 Hsp20/alpha crystallin family DSM104440_RS15790 PF00696 Amino acid kinase family DSM104440_RS15800 PF03372 Endonuclease/Exonuclease/phosphatase family DSM104440_RS15805 PF00293 NUDIX domain DSM104440_RS15810 PF01112 Asparaginase DSM104440_RS15815 PF00152 tRNA synthetases class II (D, K and N) DSM104440_RS15815 PF01336 OB-fold nucleic acid binding domain DSM104440_RS15815 PF02938 GAD domain DSM104440_RS15830 PF01435 Peptidase family M48 DSM104440_RS15835 PF00436 Single-strand binding protein family DSM104440_RS15840 PF07690 Major Facilitator Superfamily DSM104440_RS15845 PF17760 UvrA interaction domain DSM104440_RS15845 PF17755 UvrA DNA-binding domain DSM104440_RS15850 PF13660 Domain of unknown function (DUF4147) DSM104440_RS15850 PF05161 MOFRL family DSM104440_RS15855 PF01196 Ribosomal protein L17 DSM104440_RS15860 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DSM104440_RS15860 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DSM104440_RS15860 PF01000 RNA polymerase Rpb3/RpoA insert domain DSM104440_RS15865 PF00163 Ribosomal protein S4/S9 N-terminal domain DSM104440_RS15865 PF01479 S4 domain DSM104440_RS15870 PF00411 Ribosomal protein S11 DSM104440_RS15875 PF00416 Ribosomal protein S13/S18 DSM104440_RS15880 PF00444 Ribosomal protein L36 DSM104440_RS15885 PF01176 Translation initiation factor 1A / IF-1 DSM104440_RS15890 PF00344 SecY translocase DSM104440_RS15895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DSM104440_RS15900 PF00327 Ribosomal protein L30p/L7e DSM104440_RS15905 PF00333 Ribosomal protein S5, N-terminal domain DSM104440_RS15905 PF03719 Ribosomal protein S5, C-terminal domain DSM104440_RS15910 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DSM104440_RS15915 PF00347 Ribosomal protein L6 DSM104440_RS15920 PF00410 Ribosomal protein S8 DSM104440_RS15925 PF00253 Ribosomal protein S14p/S29e DSM104440_RS15930 PF00673 ribosomal L5P family C-terminus DSM104440_RS15930 PF00281 Ribosomal protein L5 DSM104440_RS15935 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DSM104440_RS15940 PF00238 Ribosomal protein L14p/L23e DSM104440_RS15945 PF00366 Ribosomal protein S17 DSM104440_RS15950 PF00831 Ribosomal L29 protein DSM104440_RS15955 PF00252 Ribosomal protein L16p/L10e DSM104440_RS15960 PF07650 KH domain DSM104440_RS15960 PF00189 Ribosomal protein S3, C-terminal domain DSM104440_RS15965 PF00237 Ribosomal protein L22p/L17e DSM104440_RS15970 PF00203 Ribosomal protein S19 DSM104440_RS15975 PF00181 Ribosomal Proteins L2, RNA binding domain DSM104440_RS15975 PF03947 Ribosomal Proteins L2, C-terminal domain DSM104440_RS15980 PF00276 Ribosomal protein L23 DSM104440_RS15985 PF00573 Ribosomal protein L4/L1 family DSM104440_RS15990 PF00297 Ribosomal protein L3 DSM104440_RS15995 PF00338 Ribosomal protein S10p/S20e DSM104440_RS16000 PF03144 Elongation factor Tu domain 2 DSM104440_RS16000 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS16000 PF03143 Elongation factor Tu C-terminal domain DSM104440_RS16005 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS16005 PF03764 Elongation factor G, domain IV DSM104440_RS16005 PF14492 Elongation Factor G, domain II DSM104440_RS16005 PF00679 Elongation factor G C-terminus DSM104440_RS16005 PF03144 Elongation factor Tu domain 2 DSM104440_RS16010 PF00177 Ribosomal protein S7p/S5e DSM104440_RS16015 PF00164 Ribosomal protein S12/S23 DSM104440_RS16020 PF04983 RNA polymerase Rpb1, domain 3 DSM104440_RS16020 PF04998 RNA polymerase Rpb1, domain 5 DSM104440_RS16020 PF00623 RNA polymerase Rpb1, domain 2 DSM104440_RS16020 PF04997 RNA polymerase Rpb1, domain 1 DSM104440_RS16020 PF05000 RNA polymerase Rpb1, domain 4 DSM104440_RS16025 PF04563 RNA polymerase beta subunit DSM104440_RS16025 PF04560 RNA polymerase Rpb2, domain 7 DSM104440_RS16025 PF00562 RNA polymerase Rpb2, domain 6 DSM104440_RS16025 PF10385 RNA polymerase beta subunit external 1 domain DSM104440_RS16025 PF04565 RNA polymerase Rpb2, domain 3 DSM104440_RS16025 PF04561 RNA polymerase Rpb2, domain 2 DSM104440_RS16030 PF00542 Ribosomal protein L7/L12 C-terminal domain DSM104440_RS16030 PF16320 Ribosomal protein L7/L12 dimerisation domain DSM104440_RS16035 PF00466 Ribosomal protein L10 DSM104440_RS16040 PF00687 Ribosomal protein L1p/L10e family DSM104440_RS16045 PF00298 Ribosomal protein L11, RNA binding domain DSM104440_RS16045 PF03946 Ribosomal protein L11, N-terminal domain DSM104440_RS16050 PF02357 Transcription termination factor nusG DSM104440_RS16050 PF00467 KOW motif DSM104440_RS16055 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DSM104440_RS16065 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS16065 PF03144 Elongation factor Tu domain 2 DSM104440_RS16065 PF03143 Elongation factor Tu C-terminal domain DSM104440_RS16090 PF04386 Stringent starvation protein B DSM104440_RS16095 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS16095 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS16100 PF02167 Cytochrome C1 family DSM104440_RS16105 PF00032 Cytochrome b(C-terminal)/b6/petD DSM104440_RS16105 PF00033 Cytochrome b/b6/petB DSM104440_RS16110 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DSM104440_RS16110 PF00355 Rieske [2Fe-2S] domain DSM104440_RS16115 PF01741 Large-conductance mechanosensitive channel, MscL DSM104440_RS16120 PF13180 PDZ domain DSM104440_RS16120 PF17820 PDZ domain DSM104440_RS16125 PF00902 Sec-independent protein translocase protein (TatC) DSM104440_RS16130 PF02416 mttA/Hcf106 family DSM104440_RS16135 PF02416 mttA/Hcf106 family DSM104440_RS16145 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DSM104440_RS16150 PF01502 Phosphoribosyl-AMP cyclohydrolase DSM104440_RS16155 PF00977 Histidine biosynthesis protein DSM104440_RS16160 PF00977 Histidine biosynthesis protein DSM104440_RS16165 PF00117 Glutamine amidotransferase class-I DSM104440_RS16170 PF00475 Imidazoleglycerol-phosphate dehydratase DSM104440_RS16175 PF00155 Aminotransferase class I and II DSM104440_RS16180 PF00815 Histidinol dehydrogenase DSM104440_RS16185 PF01634 ATP phosphoribosyltransferase DSM104440_RS16190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DSM104440_RS16195 PF01722 BolA-like protein DSM104440_RS16200 PF01061 ABC-2 type transporter DSM104440_RS16205 PF00005 ABC transporter DSM104440_RS16215 PF05494 MlaC protein DSM104440_RS16220 PF02470 MlaD protein DSM104440_RS16225 PF02405 Permease MlaE DSM104440_RS16230 PF00005 ABC transporter DSM104440_RS16235 PF00158 Sigma-54 interaction domain DSM104440_RS16235 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS16235 PF00072 Response regulator receiver domain DSM104440_RS16240 PF01471 Putative peptidoglycan binding domain DSM104440_RS16240 PF13401 AAA domain DSM104440_RS16245 PF00263 Bacterial type II and III secretion system protein DSM104440_RS16245 PF03958 Bacterial type II/III secretion system short domain DSM104440_RS16255 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSM104440_RS16255 PF00437 Type II/IV secretion system protein DSM104440_RS16260 PF00482 Type II secretion system (T2SS), protein F DSM104440_RS16290 PF02649 Type I GTP cyclohydrolase folE2 DSM104440_RS16300 PF00117 Glutamine amidotransferase class-I DSM104440_RS16305 PF00691 OmpA family DSM104440_RS16310 PF04461 Protein of unknown function (DUF520) DSM104440_RS16315 PF00764 Arginosuccinate synthase DSM104440_RS16320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DSM104440_RS16320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DSM104440_RS16325 PF00202 Aminotransferase class-III DSM104440_RS16330 PF01649 Ribosomal protein S20 DSM104440_RS16335 PF03023 Lipid II flippase MurJ DSM104440_RS16340 PF06574 FAD synthetase DSM104440_RS16340 PF01687 Riboflavin kinase DSM104440_RS16345 PF08264 Anticodon-binding domain of tRNA DSM104440_RS16345 PF00133 tRNA synthetases class I (I, L, M and V) DSM104440_RS16345 PF06827 Zinc finger found in FPG and IleRS DSM104440_RS16350 PF01252 Signal peptidase (SPase) II DSM104440_RS16355 PF02401 LytB protein DSM104440_RS16365 PF05567 Neisseria PilC beta-propeller domain DSM104440_RS16390 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS16390 PF00114 Pilin (bacterial filament) DSM104440_RS16400 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS16400 PF00585 C-terminal regulatory domain of Threonine dehydratase DSM104440_RS16405 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DSM104440_RS16410 PF01895 PhoU domain DSM104440_RS16420 PF04362 Bacterial Fe(2+) trafficking DSM104440_RS16425 PF00696 Amino acid kinase family DSM104440_RS16425 PF00583 Acetyltransferase (GNAT) family DSM104440_RS16430 PF04452 RNA methyltransferase DSM104440_RS16435 PF03994 Domain of Unknown Function (DUF350) DSM104440_RS16440 PF03738 Glutathionylspermidine synthase preATP-grasp DSM104440_RS16450 PF17284 Spermidine synthase tetramerisation domain DSM104440_RS16455 PF02675 S-adenosylmethionine decarboxylase DSM104440_RS16460 PF02779 Transketolase, pyrimidine binding domain DSM104440_RS16460 PF00456 Transketolase, thiamine diphosphate binding domain DSM104440_RS16460 PF02780 Transketolase, C-terminal domain DSM104440_RS16470 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DSM104440_RS16470 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DSM104440_RS16475 PF00893 Small Multidrug Resistance protein DSM104440_RS16485 PF00162 Phosphoglycerate kinase DSM104440_RS16490 PF00224 Pyruvate kinase, barrel domain DSM104440_RS16490 PF02887 Pyruvate kinase, alpha/beta domain DSM104440_RS16500 PF01116 Fructose-bisphosphate aldolase class-II DSM104440_RS16505 PF01259 SAICAR synthetase DSM104440_RS16510 PF07687 Peptidase dimerisation domain DSM104440_RS16510 PF01546 Peptidase family M20/M25/M40 DSM104440_RS16520 PF01925 Sulfite exporter TauE/SafE DSM104440_RS16540 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS16540 PF00593 TonB dependent receptor DSM104440_RS16545 PF04989 Cephalosporin hydroxylase DSM104440_RS16570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSM104440_RS16575 PF00534 Glycosyl transferases group 1 DSM104440_RS16575 PF13439 Glycosyltransferase Family 4 DSM104440_RS16580 PF00005 ABC transporter DSM104440_RS16580 PF00664 ABC transporter transmembrane region DSM104440_RS16585 PF00534 Glycosyl transferases group 1 DSM104440_RS16585 PF13439 Glycosyltransferase Family 4 DSM104440_RS16590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DSM104440_RS16625 PF00005 ABC transporter DSM104440_RS16630 PF01061 ABC-2 type transporter DSM104440_RS16655 PF00263 Bacterial type II and III secretion system protein DSM104440_RS16655 PF03958 Bacterial type II/III secretion system short domain DSM104440_RS16670 PF05137 Fimbrial assembly protein (PilN) DSM104440_RS16675 PF03934 Type II secretion system (T2SS), protein K DSM104440_RS16680 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS16680 PF11612 Type II secretion system (T2SS), protein J DSM104440_RS16685 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS16690 PF12019 Type II transport protein GspH DSM104440_RS16695 PF08334 Type II secretion system (T2SS), protein G DSM104440_RS16695 PF07963 Prokaryotic N-terminal methylation motif DSM104440_RS16700 PF00482 Type II secretion system (T2SS), protein F DSM104440_RS16705 PF00437 Type II/IV secretion system protein DSM104440_RS16705 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DSM104440_RS16710 PF00483 Nucleotidyl transferase DSM104440_RS16710 PF01050 Mannose-6-phosphate isomerase DSM104440_RS16720 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS16725 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS16730 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS16740 PF00005 ABC transporter DSM104440_RS16770 PF00535 Glycosyl transferase family 2 DSM104440_RS16775 PF00535 Glycosyl transferase family 2 DSM104440_RS16780 PF00733 Asparagine synthase DSM104440_RS16780 PF13537 Glutamine amidotransferase domain DSM104440_RS16785 PF13847 Methyltransferase domain DSM104440_RS16785 PF03551 Transcriptional regulator PadR-like family DSM104440_RS16790 PF01209 ubiE/COQ5 methyltransferase family DSM104440_RS16795 PF00892 EamA-like transporter family DSM104440_RS16815 PF03062 MBOAT, membrane-bound O-acyltransferase family DSM104440_RS16830 PF00483 Nucleotidyl transferase DSM104440_RS16835 PF16363 GDP-mannose 4,6 dehydratase DSM104440_RS16860 PF01370 NAD dependent epimerase/dehydratase family DSM104440_RS16865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DSM104440_RS16870 PF00535 Glycosyl transferase family 2 DSM104440_RS16875 PF08241 Methyltransferase domain DSM104440_RS16880 PF08421 Putative zinc binding domain DSM104440_RS16880 PF08484 C-methyltransferase C-terminal domain DSM104440_RS16955 PF00535 Glycosyl transferase family 2 DSM104440_RS16970 PF00534 Glycosyl transferases group 1 DSM104440_RS16970 PF17101 Stealth protein CR1, conserved region 1 DSM104440_RS16970 PF11380 Stealth protein CR2, conserved region 2 DSM104440_RS16970 PF17102 Stealth protein CR3, conserved region 3 DSM104440_RS16970 PF17103 Stealth protein CR4, conserved region 4 DSM104440_RS16980 PF00909 Ammonium Transporter Family DSM104440_RS16985 PF00543 Nitrogen regulatory protein P-II DSM104440_RS16995 PF04380 Membrane fusogenic activity DSM104440_RS17005 PF01078 Magnesium chelatase, subunit ChlI DSM104440_RS17005 PF13335 Magnesium chelatase, subunit ChlI C-terminal DSM104440_RS17010 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS17010 PF03144 Elongation factor Tu domain 2 DSM104440_RS17010 PF16658 Class II release factor RF3, C-terminal domain DSM104440_RS17015 PF01289 Thiol-activated cytolysin DSM104440_RS17015 PF17440 Thiol-activated cytolysin beta sandwich domain DSM104440_RS17025 PF07690 Major Facilitator Superfamily DSM104440_RS17030 PF07690 Major Facilitator Superfamily DSM104440_RS17040 PF01546 Peptidase family M20/M25/M40 DSM104440_RS17040 PF07687 Peptidase dimerisation domain DSM104440_RS17045 PF00378 Enoyl-CoA hydratase/isomerase DSM104440_RS17050 PF05995 Cysteine dioxygenase type I DSM104440_RS17055 PF02515 CoA-transferase family III DSM104440_RS17070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DSM104440_RS17070 PF00529 HlyD membrane-fusion protein of T1SS DSM104440_RS17075 PF00873 AcrB/AcrD/AcrF family DSM104440_RS17085 PF02574 Homocysteine S-methyltransferase DSM104440_RS17085 PF00809 Pterin binding enzyme DSM104440_RS17085 PF02965 Vitamin B12 dependent methionine synthase, activation domain DSM104440_RS17085 PF02607 B12 binding domain DSM104440_RS17085 PF02310 B12 binding domain DSM104440_RS17095 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS17095 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS17095 PF00563 EAL domain DSM104440_RS17110 PF00043 Glutathione S-transferase, C-terminal domain DSM104440_RS17110 PF02798 Glutathione S-transferase, N-terminal domain DSM104440_RS17115 PF10605 3HB-oligomer hydrolase (3HBOH) DSM104440_RS17140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DSM104440_RS17140 PF02780 Transketolase, C-terminal domain DSM104440_RS17140 PF02779 Transketolase, pyrimidine binding domain DSM104440_RS17145 PF00348 Polyprenyl synthetase DSM104440_RS17150 PF02609 Exonuclease VII small subunit DSM104440_RS17155 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS17165 PF00196 Bacterial regulatory proteins, luxR family DSM104440_RS17165 PF00072 Response regulator receiver domain DSM104440_RS17185 PF07690 Major Facilitator Superfamily DSM104440_RS17195 PF03958 Bacterial type II/III secretion system short domain DSM104440_RS17195 PF00263 Bacterial type II and III secretion system protein DSM104440_RS17225 PF14492 Elongation Factor G, domain II DSM104440_RS17225 PF03764 Elongation factor G, domain IV DSM104440_RS17225 PF00009 Elongation factor Tu GTP binding domain DSM104440_RS17225 PF00679 Elongation factor G C-terminus DSM104440_RS17225 PF03144 Elongation factor Tu domain 2 DSM104440_RS17255 PF00005 ABC transporter DSM104440_RS17255 PF00664 ABC transporter transmembrane region DSM104440_RS17255 PF03412 Peptidase C39 family DSM104440_RS17275 PF02638 Glycosyl hydrolase-like 10 DSM104440_RS17290 PF00581 Rhodanese-like domain DSM104440_RS17295 PF00326 Prolyl oligopeptidase family DSM104440_RS17305 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS17305 PF00072 Response regulator receiver domain DSM104440_RS17310 PF02660 Glycerol-3-phosphate acyltransferase DSM104440_RS17315 PF02152 Dihydroneopterin aldolase DSM104440_RS17325 PF04073 Aminoacyl-tRNA editing domain DSM104440_RS17335 PF02899 Phage integrase, N-terminal SAM-like domain DSM104440_RS17335 PF00589 Phage integrase family DSM104440_RS17340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DSM104440_RS17340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DSM104440_RS17345 PF02615 Malate/L-lactate dehydrogenase DSM104440_RS17350 PF00890 FAD binding domain DSM104440_RS17350 PF02910 Fumarate reductase flavoprotein C-term DSM104440_RS17365 PF02472 Biopolymer transport protein ExbD/TolR DSM104440_RS17370 PF02472 Biopolymer transport protein ExbD/TolR DSM104440_RS17375 PF01618 MotA/TolQ/ExbB proton channel family DSM104440_RS17380 PF03544 Gram-negative bacterial TonB protein C-terminal DSM104440_RS17385 PF05683 Fumarase C-terminus DSM104440_RS17390 PF05681 Fumarate hydratase (Fumerase) DSM104440_RS17395 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS17410 PF13085 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS17410 PF13183 4Fe-4S dicluster domain DSM104440_RS17415 PF03601 Conserved hypothetical protein 698 DSM104440_RS17420 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DSM104440_RS17430 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS17440 PF04228 Putative neutral zinc metallopeptidase DSM104440_RS17445 PF01245 Ribosomal protein L19 DSM104440_RS17450 PF01746 tRNA (Guanine-1)-methyltransferase DSM104440_RS17455 PF01782 RimM N-terminal domain DSM104440_RS17455 PF05239 PRC-barrel domain DSM104440_RS17460 PF00886 Ribosomal protein S16 DSM104440_RS17465 PF01546 Peptidase family M20/M25/M40 DSM104440_RS17465 PF07687 Peptidase dimerisation domain DSM104440_RS17475 PF00448 SRP54-type protein, GTPase domain DSM104440_RS17475 PF02881 SRP54-type protein, helical bundle domain DSM104440_RS17475 PF02978 Signal peptide binding domain DSM104440_RS17485 PF00571 CBS domain DSM104440_RS17485 PF03471 Transporter associated domain DSM104440_RS17485 PF01595 Cyclin M transmembrane N-terminal domain DSM104440_RS17515 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS17515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DSM104440_RS17520 PF00484 Carbonic anhydrase DSM104440_RS17535 PF03301 Tryptophan 2,3-dioxygenase DSM104440_RS17545 PF03976 Polyphosphate kinase 2 (PPK2) DSM104440_RS17560 PF05736 OprF membrane domain DSM104440_RS17560 PF00691 OmpA family DSM104440_RS17565 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DSM104440_RS17565 PF07228 Stage II sporulation protein E (SpoIIE) DSM104440_RS17570 PF12706 Beta-lactamase superfamily domain DSM104440_RS17570 PF00753 Metallo-beta-lactamase superfamily DSM104440_RS17575 PF01740 STAS domain DSM104440_RS17580 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS17580 PF00072 Response regulator receiver domain DSM104440_RS17585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS17585 PF00672 HAMP domain DSM104440_RS17585 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS17590 PF00593 TonB dependent receptor DSM104440_RS17590 PF07715 TonB-dependent Receptor Plug Domain DSM104440_RS17605 PF00356 Bacterial regulatory proteins, lacI family DSM104440_RS17610 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS17615 PF00920 Dehydratase family DSM104440_RS17620 PF08450 SMP-30/Gluconolactonase/LRE-like region DSM104440_RS17625 PF03328 HpcH/HpaI aldolase/citrate lyase family DSM104440_RS17630 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS17635 PF01061 ABC-2 type transporter DSM104440_RS17640 PF00005 ABC transporter DSM104440_RS17645 PF00571 CBS domain DSM104440_RS17650 PF01734 Patatin-like phospholipase DSM104440_RS17670 PF00381 PTS HPr component phosphorylation site DSM104440_RS17680 PF00248 Aldo/keto reductase family DSM104440_RS17685 PF06965 Na+/H+ antiporter 1 DSM104440_RS17695 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS17710 PF13411 MerR HTH family regulatory protein DSM104440_RS17735 PF00005 ABC transporter DSM104440_RS17760 PF05139 Erythromycin esterase DSM104440_RS17825 PF03442 Carbohydrate binding domain X2 DSM104440_RS17825 PF00942 Cellulose binding domain DSM104440_RS17910 PF00118 TCP-1/cpn60 chaperonin family DSM104440_RS17915 PF00166 Chaperonin 10 Kd subunit DSM104440_RS17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS17935 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS17935 PF00989 PAS fold DSM104440_RS17945 PF04972 BON domain DSM104440_RS17975 PF00849 RNA pseudouridylate synthase DSM104440_RS17990 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DSM104440_RS17990 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DSM104440_RS18000 PF01979 Amidohydrolase family DSM104440_RS18005 PF01380 SIS domain DSM104440_RS18010 PF07702 UTRA domain DSM104440_RS18010 PF00392 Bacterial regulatory proteins, gntR family DSM104440_RS18020 PF00728 Glycosyl hydrolase family 20, catalytic domain DSM104440_RS18020 PF07691 PA14 domain DSM104440_RS18020 PF02838 Glycosyl hydrolase family 20, domain 2 DSM104440_RS18025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DSM104440_RS18025 PF00381 PTS HPr component phosphorylation site DSM104440_RS18025 PF05524 PEP-utilising enzyme, N-terminal DSM104440_RS18025 PF02896 PEP-utilising enzyme, TIM barrel domain DSM104440_RS18025 PF00391 PEP-utilising enzyme, mobile domain DSM104440_RS18030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DSM104440_RS18030 PF00367 phosphotransferase system, EIIB DSM104440_RS18030 PF02378 Phosphotransferase system, EIIC DSM104440_RS18035 PF13091 PLD-like domain DSM104440_RS18035 PF13396 Phospholipase_D-nuclease N-terminal DSM104440_RS18050 PF00202 Aminotransferase class-III DSM104440_RS18055 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DSM104440_RS18080 PF08281 Sigma-70, region 4 DSM104440_RS18080 PF04542 Sigma-70 region 2 DSM104440_RS18085 PF03795 YCII-related domain DSM104440_RS18100 PF02735 Ku70/Ku80 beta-barrel domain DSM104440_RS18110 PF13298 DNA polymerase Ligase (LigD) DSM104440_RS18110 PF01068 ATP dependent DNA ligase domain DSM104440_RS18110 PF04679 ATP dependent DNA ligase C terminal region DSM104440_RS18130 PF05694 56kDa selenium binding protein (SBP56) DSM104440_RS18140 PF18158 Adaptive response protein AidB N-terminal domain DSM104440_RS18140 PF02770 Acyl-CoA dehydrogenase, middle domain DSM104440_RS18140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DSM104440_RS18145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS18150 PF03073 TspO/MBR family DSM104440_RS18155 PF02926 THUMP domain DSM104440_RS18155 PF01170 Putative RNA methylase family UPF0020 DSM104440_RS18160 PF03653 Uncharacterised protein family (UPF0093) DSM104440_RS18165 PF11412 Disulphide bond corrector protein DsbC DSM104440_RS18165 PF02683 Cytochrome C biogenesis protein transmembrane region DSM104440_RS18165 PF13098 Thioredoxin-like domain DSM104440_RS18170 PF00578 AhpC/TSA family DSM104440_RS18200 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DSM104440_RS18215 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS18220 PF00072 Response regulator receiver domain DSM104440_RS18220 PF04397 LytTr DNA-binding domain DSM104440_RS18225 PF00672 HAMP domain DSM104440_RS18225 PF06580 Histidine kinase DSM104440_RS18225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS18225 PF02743 Cache domain DSM104440_RS18230 PF00072 Response regulator receiver domain DSM104440_RS18230 PF04397 LytTr DNA-binding domain DSM104440_RS18235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS18235 PF07694 5TMR of 5TMR-LYT DSM104440_RS18235 PF06580 Histidine kinase DSM104440_RS18235 PF13492 GAF domain DSM104440_RS18265 PF00005 ABC transporter DSM104440_RS18265 PF08402 TOBE domain DSM104440_RS18270 PF13416 Bacterial extracellular solute-binding protein DSM104440_RS18275 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS18280 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS18285 PF00905 Penicillin binding protein transpeptidase domain DSM104440_RS18295 PF01596 O-methyltransferase DSM104440_RS18300 PF00106 short chain dehydrogenase DSM104440_RS18305 PF03109 ABC1 family DSM104440_RS18320 PF00069 Protein kinase domain DSM104440_RS18330 PF07690 Major Facilitator Superfamily DSM104440_RS18345 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS18345 PF16701 Adenylate cyclase regulatory domain DSM104440_RS18350 PF01625 Peptide methionine sulfoxide reductase DSM104440_RS18355 PF03477 ATP cone domain DSM104440_RS18355 PF02867 Ribonucleotide reductase, barrel domain DSM104440_RS18355 PF00317 Ribonucleotide reductase, all-alpha domain DSM104440_RS18360 PF03401 Tripartite tricarboxylate transporter family receptor DSM104440_RS18365 PF00291 Pyridoxal-phosphate dependent enzyme DSM104440_RS18365 PF00571 CBS domain DSM104440_RS18385 PF01209 ubiE/COQ5 methyltransferase family DSM104440_RS18395 PF00486 Transcriptional regulatory protein, C terminal DSM104440_RS18395 PF00072 Response regulator receiver domain DSM104440_RS18400 PF11808 Phosphate regulon sensor protein PhoR DSM104440_RS18400 PF00989 PAS fold DSM104440_RS18400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS18400 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS18410 PF00381 PTS HPr component phosphorylation site DSM104440_RS18415 PF02896 PEP-utilising enzyme, TIM barrel domain DSM104440_RS18415 PF05524 PEP-utilising enzyme, N-terminal DSM104440_RS18415 PF00391 PEP-utilising enzyme, mobile domain DSM104440_RS18425 PF11737 Protein of unknown function (DUF3300) DSM104440_RS18430 PF00561 alpha/beta hydrolase fold DSM104440_RS18435 PF07021 Methionine biosynthesis protein MetW DSM104440_RS18435 PF00561 alpha/beta hydrolase fold DSM104440_RS18440 PF03976 Polyphosphate kinase 2 (PPK2) DSM104440_RS18445 PF07690 Major Facilitator Superfamily DSM104440_RS18450 PF01641 SelR domain DSM104440_RS18460 PF12848 ABC transporter DSM104440_RS18460 PF00005 ABC transporter DSM104440_RS18465 PF03372 Endonuclease/Exonuclease/phosphatase family DSM104440_RS18470 PF00156 Phosphoribosyl transferase domain DSM104440_RS18480 PF02637 GatB domain DSM104440_RS18480 PF02934 GatB/GatE catalytic domain DSM104440_RS18485 PF01425 Amidase DSM104440_RS18490 PF02686 Glu-tRNAGln amidotransferase C subunit DSM104440_RS18500 PF04085 rod shape-determining protein MreC DSM104440_RS18505 PF04093 rod shape-determining protein MreD DSM104440_RS18510 PF03717 Penicillin-binding Protein dimerisation domain DSM104440_RS18510 PF00905 Penicillin binding protein transpeptidase domain DSM104440_RS18515 PF01098 Cell cycle protein DSM104440_RS18520 PF03330 Lytic transglycolase DSM104440_RS18520 PF05036 Sporulation related domain DSM104440_RS18525 PF07943 Penicillin-binding protein 5, C-terminal domain DSM104440_RS18525 PF00768 D-alanyl-D-alanine carboxypeptidase DSM104440_RS18530 PF01063 Amino-transferase class IV DSM104440_RS18535 PF04359 Protein of unknown function (DUF493) DSM104440_RS18540 PF03099 Biotin/lipoate A/B protein ligase family DSM104440_RS18545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DSM104440_RS18545 PF04055 Radical SAM superfamily DSM104440_RS18565 PF01274 Malate synthase DSM104440_RS18575 PF02558 Ketopantoate reductase PanE/ApbA DSM104440_RS18575 PF08546 Ketopantoate reductase PanE/ApbA C terminal DSM104440_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DSM104440_RS18580 PF03466 LysR substrate binding domain DSM104440_RS18590 PF04397 LytTr DNA-binding domain DSM104440_RS18590 PF00072 Response regulator receiver domain DSM104440_RS18595 PF06580 Histidine kinase DSM104440_RS18595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS18595 PF07694 5TMR of 5TMR-LYT DSM104440_RS18600 PF14698 Argininosuccinate lyase C-terminal DSM104440_RS18600 PF00206 Lyase DSM104440_RS18610 PF01491 Frataxin-like domain DSM104440_RS18615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DSM104440_RS18615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DSM104440_RS18630 PF00571 CBS domain DSM104440_RS18630 PF03448 MgtE intracellular N domain DSM104440_RS18630 PF01769 Divalent cation transporter DSM104440_RS18635 PF00912 Transglycosylase DSM104440_RS18640 PF01488 Shikimate / quinate 5-dehydrogenase DSM104440_RS18640 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DSM104440_RS18640 PF08501 Shikimate dehydrogenase substrate binding domain DSM104440_RS18645 PF03951 Glutamine synthetase, beta-Grasp domain DSM104440_RS18645 PF00120 Glutamine synthetase, catalytic domain DSM104440_RS18655 PF00512 His Kinase A (phospho-acceptor) domain DSM104440_RS18655 PF00989 PAS fold DSM104440_RS18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DSM104440_RS18660 PF00072 Response regulator receiver domain DSM104440_RS18660 PF00158 Sigma-54 interaction domain DSM104440_RS18660 PF02954 Bacterial regulatory protein, Fis family DSM104440_RS18665 PF03707 Bacterial signalling protein N terminal repeat DSM104440_RS18665 PF00563 EAL domain DSM104440_RS18665 PF00990 Diguanylate cyclase, GGDEF domain DSM104440_RS18680 PF01432 Peptidase family M3 DSM104440_RS18685 PF01979 Amidohydrolase family DSM104440_RS18690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DSM104440_RS18690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DSM104440_RS18695 PF00156 Phosphoribosyl transferase domain DSM104440_RS18700 PF03652 Holliday junction resolvase DSM104440_RS18705 PF02622 Uncharacterized ACR, COG1678 DSM104440_RS18715 PF00326 Prolyl oligopeptidase family DSM104440_RS18730 PF05728 Uncharacterised protein family (UPF0227) DSM104440_RS18735 PF02567 Phenazine biosynthesis-like protein DSM104440_RS18740 PF01225 Mur ligase family, catalytic domain DSM104440_RS18740 PF02875 Mur ligase family, glutamate ligase domain DSM104440_RS18740 PF08245 Mur ligase middle domain DSM104440_RS18755 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DSM104440_RS18755 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DSM104440_RS18775 PF09335 SNARE associated Golgi protein DSM104440_RS18780 PF03900 Porphobilinogen deaminase, C-terminal domain DSM104440_RS18780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DSM104440_RS18785 PF02602 Uroporphyrinogen-III synthase HemD DSM104440_RS18805 PF00111 2Fe-2S iron-sulfur cluster binding domain DSM104440_RS18805 PF00970 Oxidoreductase FAD-binding domain DSM104440_RS18805 PF00175 Oxidoreductase NAD-binding domain DSM104440_RS18815 PF00578 AhpC/TSA family DSM104440_RS18820 PF01220 Dehydroquinase class II DSM104440_RS18825 PF00364 Biotin-requiring enzyme DSM104440_RS18830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DSM104440_RS18830 PF02785 Biotin carboxylase C-terminal domain DSM104440_RS18830 PF00289 Biotin carboxylase, N-terminal domain DSM104440_RS18850 PF00294 pfkB family carbohydrate kinase DSM104440_RS18865 PF01553 Acyltransferase DSM104440_RS18870 PF00149 Calcineurin-like phosphoesterase DSM104440_RS18875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DSM104440_RS18890 PF02719 Polysaccharide biosynthesis protein DSM104440_RS18895 PF00953 Glycosyl transferase family 4 DSM104440_RS18915 PF04898 Glutamate synthase central domain DSM104440_RS18915 PF01645 Conserved region in glutamate synthase DSM104440_RS18915 PF01493 GXGXG motif DSM104440_RS18915 PF00310 Glutamine amidotransferases class-II DSM104440_RS18920 PF07992 Pyridine nucleotide-disulphide oxidoreductase DSM104440_RS18920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DSM104440_RS18930 PF01208 Uroporphyrinogen decarboxylase (URO-D) DSM104440_RS18935 PF18074 Primosomal protein N C-terminal domain DSM104440_RS18935 PF17764 3′ DNA-binding domain (3′BD) DSM104440_RS18935 PF00271 Helicase conserved C-terminal domain DSM104440_RS18935 PF00270 DEAD/DEAH box helicase DSM104440_RS18935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DSM104440_RS18945 PF00750 tRNA synthetases class I (R) DSM104440_RS18945 PF05746 DALR anticodon binding domain DSM104440_RS18945 PF03485 Arginyl tRNA synthetase N terminal domain DSM104440_RS18955 PF13462 Thioredoxin DSM104440_RS18960 PF00106 short chain dehydrogenase DSM104440_RS18965 PF00528 Binding-protein-dependent transport system inner membrane component DSM104440_RS18970 PF00005 ABC transporter DSM104440_RS18985 PF00682 HMGL-like DSM104440_RS18990 PF00311 Phosphoenolpyruvate carboxylase DSM104440_RS19000 PF02515 CoA-transferase family III DSM104440_RS19005 PF03480 Bacterial extracellular solute-binding protein, family 7 DSM104440_RS19015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DSM104440_RS19020 PF07690 Major Facilitator Superfamily DSM104440_RS19040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DSM104440_RS19050 PF02824 TGS domain DSM104440_RS19050 PF13291 ACT domain DSM104440_RS19050 PF04607 Region found in RelA / SpoT proteins DSM104440_RS19055 PF04239 Protein of unknown function (DUF421) DSM104440_RS19060 PF01380 SIS domain DSM104440_RS19080 PF00672 HAMP domain DSM104440_RS19080 PF02743 Cache domain DSM104440_RS19080 PF00211 Adenylate and Guanylate cyclase catalytic domain DSM104440_RS19085 PF13545 Crp-like helix-turn-helix domain DSM104440_RS19085 PF00027 Cyclic nucleotide-binding domain DSM104440_RS19090 PF00132 Bacterial transferase hexapeptide (six repeats) DSM104440_RS19090 PF12804 MobA-like NTP transferase domain DSM104440_RS19095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DSM104440_RS19095 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DSM104440_RS19100 PF02874 ATP synthase alpha/beta family, beta-barrel domain DSM104440_RS19100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSM104440_RS19105 PF00231 ATP synthase DSM104440_RS19110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DSM104440_RS19110 PF00306 ATP synthase alpha/beta chain, C terminal domain DSM104440_RS19110 PF02874 ATP synthase alpha/beta family, beta-barrel domain DSM104440_RS19115 PF00213 ATP synthase delta (OSCP) subunit DSM104440_RS19120 PF00430 ATP synthase B/B' CF(0) DSM104440_RS19125 PF00137 ATP synthase subunit C DSM104440_RS19130 PF00119 ATP synthase A chain DSM104440_RS19140 PF02195 ParB-like nuclease domain DSM104440_RS19140 PF17762 HTH domain found in ParB protein DSM104440_RS19145 PF13614 AAA domain DSM104440_RS19150 PF02527 rRNA small subunit methyltransferase G DSM104440_RS19155 PF01134 Glucose inhibited division protein A DSM104440_RS19155 PF13932 GidA associated domain DSM104440_RS19170 PF01926 50S ribosome-binding GTPase DSM104440_RS19170 PF12631 MnmE helical domain DSM104440_RS19170 PF10396 GTP-binding protein TrmE N-terminus DSM104440_RS19175 PF02096 60Kd inner membrane protein DSM104440_RS19175 PF14849 YidC periplasmic domain DSM104440_RS19180 PF01809 Putative membrane protein insertion efficiency factor DSM104440_RS19185 PF00825 Ribonuclease P DSM104440_RS19190 PF00468 Ribosomal protein L34