locus-tag class description M2905_RS00005 PF01648 4'-phosphopantetheinyl transferase superfamily M2905_RS00020 PF02229 Transcriptional Coactivator p15 (PC4) M2905_RS00025 PF08340 Domain of unknown function (DUF1732) M2905_RS00025 PF03755 YicC-like family, N-terminal region M2905_RS00030 PF00625 Guanylate kinase M2905_RS00035 PF01192 RNA polymerase Rpb6 M2905_RS00040 PF00271 Helicase conserved C-terminal domain M2905_RS00040 PF17764 3′ DNA-binding domain (3′BD) M2905_RS00040 PF18074 Primosomal protein N C-terminal domain M2905_RS00040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M2905_RS00040 PF04851 Type III restriction enzyme, res subunit M2905_RS00045 PF01327 Polypeptide deformylase M2905_RS00050 PF02911 Formyl transferase, C-terminal domain M2905_RS00050 PF00551 Formyl transferase M2905_RS00055 PF01189 16S rRNA methyltransferase RsmB/F M2905_RS00055 PF01029 NusB family M2905_RS00065 PF03793 PASTA domain M2905_RS00065 PF00069 Protein kinase domain M2905_RS00070 PF02683 Cytochrome C biogenesis protein transmembrane region M2905_RS00080 PF03193 RsgA GTPase M2905_RS00080 PF16745 RsgA N-terminal domain M2905_RS00085 PF00834 Ribulose-phosphate 3 epimerase family M2905_RS00090 PF04263 Thiamin pyrophosphokinase, catalytic domain M2905_RS00090 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M2905_RS00095 PF00830 Ribosomal L28 family M2905_RS00100 PF03780 Asp23 family, cell envelope-related function M2905_RS00105 PF13684 Dihydroxyacetone kinase family M2905_RS00105 PF02734 DAK2 domain M2905_RS00110 PF00270 DEAD/DEAH box helicase M2905_RS00110 PF00271 Helicase conserved C-terminal domain M2905_RS00110 PF17191 RecG wedge domain M2905_RS00115 PF02504 Fatty acid synthesis protein M2905_RS00120 PF00550 Phosphopantetheine attachment site M2905_RS00125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS00125 PF00005 ABC transporter M2905_RS00130 PF00005 ABC transporter M2905_RS00130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS00135 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2905_RS00150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2905_RS00155 PF00035 Double-stranded RNA binding motif M2905_RS00155 PF14622 Ribonuclease-III-like M2905_RS00160 PF02463 RecF/RecN/SMC N terminal domain M2905_RS00160 PF06470 SMC proteins Flexible Hinge Domain M2905_RS00170 PF02881 SRP54-type protein, helical bundle domain M2905_RS00170 PF00448 SRP54-type protein, GTPase domain M2905_RS00175 PF02655 ATP-grasp domain M2905_RS00175 PF18419 ATP-grasp-like domain M2905_RS00175 PF04262 Glutamate-cysteine ligase M2905_RS00180 PF05816 Toxic anion resistance protein (TelA) M2905_RS00190 PF00293 NUDIX domain M2905_RS00200 PF01048 Phosphorylase superfamily M2905_RS00205 PF00857 Isochorismatase family M2905_RS00210 PF01757 Acyltransferase family M2905_RS00215 PF00266 Aminotransferase class-V M2905_RS00230 PF01497 Periplasmic binding protein M2905_RS00230 PF12833 Helix-turn-helix domain M2905_RS00235 PF00664 ABC transporter transmembrane region M2905_RS00235 PF00005 ABC transporter M2905_RS00240 PF00664 ABC transporter transmembrane region M2905_RS00240 PF00005 ABC transporter M2905_RS00245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2905_RS00245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2905_RS00255 PF01323 DSBA-like thioredoxin domain M2905_RS00260 PF00005 ABC transporter M2905_RS00265 PF01458 Uncharacterized protein family (UPF0051) M2905_RS00270 PF00266 Aminotransferase class-V M2905_RS00275 PF01592 NifU-like N terminal domain M2905_RS00280 PF01458 Uncharacterized protein family (UPF0051) M2905_RS00285 PF03123 CAT RNA binding domain M2905_RS00285 PF00874 PRD domain M2905_RS00290 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS00290 PF00367 phosphotransferase system, EIIB M2905_RS00290 PF02378 Phosphotransferase system, EIIC M2905_RS00305 PF00480 ROK family M2905_RS00305 PF01047 MarR family M2905_RS00315 PF02378 Phosphotransferase system, EIIC M2905_RS00325 PF07670 Nucleoside recognition M2905_RS00325 PF02421 Ferrous iron transport protein B M2905_RS00325 PF17910 FeoB cytosolic helical domain M2905_RS00325 PF07664 Ferrous iron transport protein B C terminus M2905_RS00335 PF00072 Response regulator receiver domain M2905_RS00335 PF12833 Helix-turn-helix domain M2905_RS00340 PF00672 HAMP domain M2905_RS00340 PF06580 Histidine kinase M2905_RS00340 PF02743 Cache domain M2905_RS00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS00345 PF00890 FAD binding domain M2905_RS00345 PF04205 FMN-binding domain M2905_RS00350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2905_RS00370 PF10417 C-terminal domain of 1-Cys peroxiredoxin M2905_RS00370 PF00578 AhpC/TSA family M2905_RS00375 PF00854 POT family M2905_RS00390 PF03358 NADPH-dependent FMN reductase M2905_RS00390 PF04205 FMN-binding domain M2905_RS00390 PF00890 FAD binding domain M2905_RS00410 PF00300 Histidine phosphatase superfamily (branch 1) M2905_RS00415 PF00874 PRD domain M2905_RS00415 PF03123 CAT RNA binding domain M2905_RS00420 PF00367 phosphotransferase system, EIIB M2905_RS00420 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS00420 PF02378 Phosphotransferase system, EIIC M2905_RS00425 PF00232 Glycosyl hydrolase family 1 M2905_RS00450 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00460 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00465 PF00072 Response regulator receiver domain M2905_RS00465 PF00196 Bacterial regulatory proteins, luxR family M2905_RS00470 PF06580 Histidine kinase M2905_RS00470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS00470 PF00672 HAMP domain M2905_RS00470 PF02743 Cache domain M2905_RS00500 PF00480 ROK family M2905_RS00510 PF07687 Peptidase dimerisation domain M2905_RS00510 PF01546 Peptidase family M20/M25/M40 M2905_RS00540 PF00756 Putative esterase M2905_RS00540 PF01476 LysM domain M2905_RS00545 PF12320 Type 5 capsule protein repressor C-terminal domain M2905_RS00545 PF00149 Calcineurin-like phosphoesterase M2905_RS00550 PF13476 AAA domain M2905_RS00560 PF01047 MarR family M2905_RS00565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2905_RS00575 PF03358 NADPH-dependent FMN reductase M2905_RS00585 PF03441 FAD binding domain of DNA photolyase M2905_RS00585 PF00875 DNA photolyase M2905_RS00600 PF01926 50S ribosome-binding GTPase M2905_RS00615 PF01926 50S ribosome-binding GTPase M2905_RS00620 PF01985 CRS1 / YhbY (CRM) domain M2905_RS00625 PF01467 Cytidylyltransferase-like M2905_RS00630 PF01966 HD domain M2905_RS00640 PF13649 Methyltransferase domain M2905_RS00650 PF00478 IMP dehydrogenase / GMP reductase domain M2905_RS00660 PF08543 Phosphomethylpyrimidine kinase M2905_RS00665 PF00155 Aminotransferase class I and II M2905_RS00665 PF00392 Bacterial regulatory proteins, gntR family M2905_RS00670 PF18273 Type III R-M EcoP15I C-terminal domain M2905_RS00670 PF01555 DNA methylase M2905_RS00675 PF08774 VRR-NUC domain M2905_RS00675 PF04851 Type III restriction enzyme, res subunit M2905_RS00690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M2905_RS00690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M2905_RS00695 PF00550 Phosphopantetheine attachment site M2905_RS00700 PF03060 Nitronate monooxygenase M2905_RS00705 PF00698 Acyl transferase domain M2905_RS00715 PF00109 Beta-ketoacyl synthase, N-terminal domain M2905_RS00715 PF02801 Beta-ketoacyl synthase, C-terminal domain M2905_RS00720 PF00364 Biotin-requiring enzyme M2905_RS00725 PF07977 FabA-like domain M2905_RS00730 PF02785 Biotin carboxylase C-terminal domain M2905_RS00730 PF00289 Biotin carboxylase, N-terminal domain M2905_RS00730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2905_RS00735 PF01039 Carboxyl transferase domain M2905_RS00740 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M2905_RS00745 PF03466 LysR substrate binding domain M2905_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2905_RS00755 PF00676 Dehydrogenase E1 component M2905_RS00760 PF02780 Transketolase, C-terminal domain M2905_RS00760 PF02779 Transketolase, pyrimidine binding domain M2905_RS00765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2905_RS00765 PF02817 e3 binding domain M2905_RS00765 PF00364 Biotin-requiring enzyme M2905_RS00770 PF01515 Phosphate acetyl/butaryl transferase M2905_RS00775 PF00871 Acetokinase family M2905_RS00780 PF00005 ABC transporter M2905_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00790 PF06738 Putative threonine/serine exporter M2905_RS00810 PF01266 FAD dependent oxidoreductase M2905_RS00815 PF16916 Dimerisation domain of Zinc Transporter M2905_RS00815 PF01545 Cation efflux family M2905_RS00820 PF03951 Glutamine synthetase, beta-Grasp domain M2905_RS00820 PF00120 Glutamine synthetase, catalytic domain M2905_RS00825 PF00570 HRDC domain M2905_RS00825 PF16124 RecQ zinc-binding M2905_RS00825 PF00270 DEAD/DEAH box helicase M2905_RS00825 PF09382 RQC domain M2905_RS00825 PF00271 Helicase conserved C-terminal domain M2905_RS00835 PF00326 Prolyl oligopeptidase family M2905_RS00840 PF09383 NIL domain M2905_RS00840 PF00005 ABC transporter M2905_RS00845 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS00850 PF03180 NLPA lipoprotein M2905_RS00855 PF07687 Peptidase dimerisation domain M2905_RS00855 PF01546 Peptidase family M20/M25/M40 M2905_RS00865 PF00270 DEAD/DEAH box helicase M2905_RS00865 PF00271 Helicase conserved C-terminal domain M2905_RS00870 PF07694 5TMR of 5TMR-LYT M2905_RS00870 PF13492 GAF domain M2905_RS00870 PF06580 Histidine kinase M2905_RS00870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS00875 PF00072 Response regulator receiver domain M2905_RS00875 PF04397 LytTr DNA-binding domain M2905_RS00880 PF02554 Carbon starvation protein CstA M2905_RS00890 PF01496 V-type ATPase 116kDa subunit family M2905_RS00895 PF00137 ATP synthase subunit C M2905_RS00905 PF01992 ATP synthase (C/AC39) subunit M2905_RS00910 PF01990 ATP synthase (F/14-kDa) subunit M2905_RS00915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2905_RS00915 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2905_RS00915 PF16886 ATPsynthase alpha/beta subunit N-term extension M2905_RS00920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2905_RS00920 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2905_RS00925 PF01813 ATP synthase subunit D M2905_RS00930 PF13520 Amino acid permease M2905_RS00935 PF01380 SIS domain M2905_RS00945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M2905_RS00950 PF00288 GHMP kinases N terminal domain M2905_RS00950 PF08544 GHMP kinases C terminal M2905_RS00950 PF10509 Galactokinase galactose-binding signature M2905_RS00955 PF16363 GDP-mannose 4,6 dehydratase M2905_RS00960 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M2905_RS00960 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M2905_RS00965 PF00356 Bacterial regulatory proteins, lacI family M2905_RS00970 PF00814 Glycoprotease family M2905_RS00980 PF00583 Acetyltransferase (GNAT) family M2905_RS00985 PF00814 Glycoprotease family M2905_RS00990 PF04565 RNA polymerase Rpb2, domain 3 M2905_RS00990 PF04563 RNA polymerase beta subunit M2905_RS00990 PF10385 RNA polymerase beta subunit external 1 domain M2905_RS00990 PF00562 RNA polymerase Rpb2, domain 6 M2905_RS00990 PF04560 RNA polymerase Rpb2, domain 7 M2905_RS00990 PF04561 RNA polymerase Rpb2, domain 2 M2905_RS00995 PF04997 RNA polymerase Rpb1, domain 1 M2905_RS00995 PF00623 RNA polymerase Rpb1, domain 2 M2905_RS00995 PF04983 RNA polymerase Rpb1, domain 3 M2905_RS00995 PF05000 RNA polymerase Rpb1, domain 4 M2905_RS00995 PF04998 RNA polymerase Rpb1, domain 5 M2905_RS01020 PF00300 Histidine phosphatase superfamily (branch 1) M2905_RS01025 PF00072 Response regulator receiver domain M2905_RS01025 PF00486 Transcriptional regulatory protein, C terminal M2905_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS01040 PF00005 ABC transporter M2905_RS01045 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2905_RS01050 PF02618 YceG-like family M2905_RS01055 PF01272 Transcription elongation factor, GreA/GreB, C-term M2905_RS01055 PF03449 Transcription elongation factor, N-terminal M2905_RS01065 PF00672 HAMP domain M2905_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS01065 PF07730 Histidine kinase M2905_RS01070 PF00196 Bacterial regulatory proteins, luxR family M2905_RS01070 PF00072 Response regulator receiver domain M2905_RS01075 PF02254 TrkA-N domain M2905_RS01075 PF02080 TrkA-C domain M2905_RS01090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2905_RS01090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2905_RS01100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M2905_RS01100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M2905_RS01105 PF01678 Diaminopimelate epimerase M2905_RS01110 PF00398 Ribosomal RNA adenine dimethylase M2905_RS01115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS01120 PF00005 ABC transporter M2905_RS01135 PF01712 Deoxynucleoside kinase M2905_RS01140 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2905_RS01140 PF02056 Family 4 glycosyl hydrolase M2905_RS01150 PF03807 NADP oxidoreductase coenzyme F420-dependent M2905_RS01150 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2905_RS01155 PF09924 Uncharacterised conserved protein (DUF2156) M2905_RS01155 PF03706 Lysylphosphatidylglycerol synthase TM region M2905_RS01165 PF00005 ABC transporter M2905_RS01170 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS01180 PF02705 K+ potassium transporter M2905_RS01185 PF00144 Beta-lactamase M2905_RS01190 PF07690 Major Facilitator Superfamily M2905_RS01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS01205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2905_RS01205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS01210 PF07685 CobB/CobQ-like glutamine amidotransferase domain M2905_RS01215 PF08245 Mur ligase middle domain M2905_RS01215 PF08353 Domain of unknown function (DUF1727) M2905_RS01225 PF18041 MapZ extracellular domain 1 M2905_RS01225 PF18708 MapZ extracellular C-terminal domain 2 M2905_RS01230 PF02522 Aminoglycoside 3-N-acetyltransferase M2905_RS01235 PF01361 Tautomerase enzyme M2905_RS01245 PF03553 Na+/H+ antiporter family M2905_RS01250 PF00356 Bacterial regulatory proteins, lacI family M2905_RS01260 PF02151 UvrB/uvrC motif M2905_RS01260 PF17757 UvrB interaction domain M2905_RS01260 PF12344 Ultra-violet resistance protein B M2905_RS01260 PF04851 Type III restriction enzyme, res subunit M2905_RS01260 PF00271 Helicase conserved C-terminal domain M2905_RS01265 PF17760 UvrA interaction domain M2905_RS01265 PF00005 ABC transporter M2905_RS01265 PF17755 UvrA DNA-binding domain M2905_RS01270 PF01063 Amino-transferase class IV M2905_RS01275 PF03668 P-loop ATPase protein family M2905_RS01280 PF01933 Uncharacterised protein family UPF0052 M2905_RS01285 PF14527 WhiA LAGLIDADG-like domain M2905_RS01285 PF10298 WhiA N-terminal LAGLIDADG-like domain M2905_RS01285 PF02650 WhiA C-terminal HTH domain M2905_RS01290 PF00574 Clp protease M2905_RS01300 PF01245 Ribosomal protein L19 M2905_RS01305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2905_RS01310 PF02632 BioY family M2905_RS01315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS01315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2905_RS01320 PF00326 Prolyl oligopeptidase family M2905_RS01325 PF01883 Iron-sulfur cluster assembly protein M2905_RS01345 PF01470 Pyroglutamyl peptidase M2905_RS01360 PF01515 Phosphate acetyl/butaryl transferase M2905_RS01365 PF00871 Acetokinase family M2905_RS01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS01370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS01375 PF00676 Dehydrogenase E1 component M2905_RS01380 PF02779 Transketolase, pyrimidine binding domain M2905_RS01380 PF02780 Transketolase, C-terminal domain M2905_RS01385 PF02817 e3 binding domain M2905_RS01385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2905_RS01385 PF00364 Biotin-requiring enzyme M2905_RS01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2905_RS01395 PF03466 LysR substrate binding domain M2905_RS01410 PF13091 PLD-like domain M2905_RS01415 PF01228 Glycine radical M2905_RS01415 PF02901 Pyruvate formate lyase-like M2905_RS01420 PF04055 Radical SAM superfamily M2905_RS01425 PF02833 DHHA2 domain M2905_RS01425 PF01368 DHH family M2905_RS01430 PF01479 S4 domain M2905_RS01430 PF00849 RNA pseudouridylate synthase M2905_RS01445 PF13307 Helicase C-terminal domain M2905_RS01445 PF04851 Type III restriction enzyme, res subunit M2905_RS01445 PF00929 Exonuclease M2905_RS01455 PF00155 Aminotransferase class I and II M2905_RS01460 PF01336 OB-fold nucleic acid binding domain M2905_RS01460 PF00152 tRNA synthetases class II (D, K and N) M2905_RS01465 PF03965 Penicillinase repressor M2905_RS01470 PF00403 Heavy-metal-associated domain M2905_RS01475 PF00403 Heavy-metal-associated domain M2905_RS01485 PF00860 Permease family M2905_RS01490 PF03591 AzlC protein M2905_RS01500 PF17783 CvfB-like winged helix domain M2905_RS01500 PF13509 S1 domain M2905_RS01510 PF01475 Ferric uptake regulator family M2905_RS01515 PF02899 Phage integrase, N-terminal SAM-like domain M2905_RS01515 PF00589 Phage integrase family M2905_RS01520 PF02616 Segregation and condensation protein ScpA M2905_RS01525 PF04079 Segregation and condensation complex subunit ScpB M2905_RS01530 PF00849 RNA pseudouridylate synthase M2905_RS01530 PF01479 S4 domain M2905_RS01535 PF00072 Response regulator receiver domain M2905_RS01535 PF00486 Transcriptional regulatory protein, C terminal M2905_RS01540 PF12822 ECF transporter, substrate-specific component M2905_RS01555 PF00270 DEAD/DEAH box helicase M2905_RS01555 PF00271 Helicase conserved C-terminal domain M2905_RS01565 PF02224 Cytidylate kinase M2905_RS01570 PF00575 S1 RNA binding domain M2905_RS01575 PF01926 50S ribosome-binding GTPase M2905_RS01575 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M2905_RS01580 PF00216 Bacterial DNA-binding protein M2905_RS01590 PF08858 IDEAL domain M2905_RS01590 PF08864 UPF0302 domain M2905_RS01595 PF04198 Putative sugar-binding domain M2905_RS01600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M2905_RS01600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M2905_RS01605 PF00162 Phosphoglycerate kinase M2905_RS01610 PF00121 Triosephosphate isomerase M2905_RS01615 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M2905_RS01615 PF01676 Metalloenzyme superfamily M2905_RS01620 PF00113 Enolase, C-terminal TIM barrel domain M2905_RS01620 PF03952 Enolase, N-terminal domain M2905_RS01640 PF08708 Primase C terminal 1 (PriCT-1) M2905_RS01650 PF02796 Helix-turn-helix domain of resolvase M2905_RS01650 PF00239 Resolvase, N terminal domain M2905_RS01660 PF00302 Chloramphenicol acetyltransferase M2905_RS01680 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) M2905_RS01685 PF00398 Ribosomal RNA adenine dimethylase M2905_RS01705 PF01636 Phosphotransferase enzyme family M2905_RS01715 PF00583 Acetyltransferase (GNAT) family M2905_RS01720 PF01636 Phosphotransferase enzyme family M2905_RS01730 PF13610 DDE domain M2905_RS01735 PF07690 Major Facilitator Superfamily M2905_RS01740 PF01076 Plasmid recombination enzyme M2905_RS01745 PF01446 Replication protein M2905_RS01750 PF13610 DDE domain M2905_RS01765 PF08998 Bacterial epsilon antitoxin M2905_RS01805 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS01810 PF00005 ABC transporter M2905_RS01810 PF00571 CBS domain M2905_RS01815 PF07729 FCD domain M2905_RS01815 PF00392 Bacterial regulatory proteins, gntR family M2905_RS01820 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M2905_RS01820 PF00056 lactate/malate dehydrogenase, NAD binding domain M2905_RS01835 PF01070 FMN-dependent dehydrogenase M2905_RS01840 PF08544 GHMP kinases C terminal M2905_RS01840 PF00288 GHMP kinases N terminal domain M2905_RS01850 PF10509 Galactokinase galactose-binding signature M2905_RS01850 PF08544 GHMP kinases C terminal M2905_RS01850 PF00288 GHMP kinases N terminal domain M2905_RS01865 PF00368 Hydroxymethylglutaryl-coenzyme A reductase M2905_RS01870 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M2905_RS01870 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M2905_RS01875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2905_RS01885 PF02954 Bacterial regulatory protein, Fis family M2905_RS01885 PF00989 PAS fold M2905_RS01885 PF00158 Sigma-54 interaction domain M2905_RS01890 PF00465 Iron-containing alcohol dehydrogenase M2905_RS01895 PF00171 Aldehyde dehydrogenase family M2905_RS01900 PF06130 Phosphate propanoyltransferase M2905_RS01910 PF00871 Acetokinase family M2905_RS01915 PF00465 Iron-containing alcohol dehydrogenase M2905_RS01920 PF09269 Domain of unknown function (DUF1967) M2905_RS01920 PF01018 GTP1/OBG M2905_RS01920 PF01926 50S ribosome-binding GTPase M2905_RS01925 PF00753 Metallo-beta-lactamase superfamily M2905_RS01925 PF12706 Beta-lactamase superfamily domain M2905_RS01930 PF00106 short chain dehydrogenase M2905_RS01940 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2905_RS01940 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2905_RS01945 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2905_RS01945 PF01297 Zinc-uptake complex component A periplasmic M2905_RS01950 PF17768 RecJ OB domain M2905_RS01950 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M2905_RS01950 PF01368 DHH family M2905_RS01950 PF02272 DHHA1 domain M2905_RS01955 PF00156 Phosphoribosyl transferase domain M2905_RS01970 PF10576 Iron-sulfur binding domain of endonuclease III M2905_RS01970 PF00633 Helix-hairpin-helix motif M2905_RS01970 PF00730 HhH-GPD superfamily base excision DNA repair protein M2905_RS01975 PF00912 Transglycosylase M2905_RS01975 PF00905 Penicillin binding protein transpeptidase domain M2905_RS01980 PF03838 Recombination protein U M2905_RS01985 PF06908 YspA SLOG family M2905_RS01990 PF05103 DivIVA protein M2905_RS02000 PF01170 Putative RNA methylase family UPF0020 M2905_RS02000 PF02926 THUMP domain M2905_RS02005 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M2905_RS02010 PF00375 Sodium:dicarboxylate symporter family M2905_RS02015 PF13456 Reverse transcriptase-like M2905_RS02025 PF00313 'Cold-shock' DNA-binding domain M2905_RS02040 PF01252 Signal peptidase (SPase) II M2905_RS02045 PF00849 RNA pseudouridylate synthase M2905_RS02045 PF01479 S4 domain M2905_RS02050 PF00156 Phosphoribosyl transferase domain M2905_RS02055 PF00860 Permease family M2905_RS02060 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M2905_RS02060 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M2905_RS02065 PF01979 Amidohydrolase family M2905_RS02070 PF00117 Glutamine amidotransferase class-I M2905_RS02070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M2905_RS02075 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M2905_RS02075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2905_RS02075 PF02142 MGS-like domain M2905_RS02080 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M2905_RS02080 PF00970 Oxidoreductase FAD-binding domain M2905_RS02085 PF01180 Dihydroorotate dehydrogenase M2905_RS02090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2905_RS02095 PF00156 Phosphoribosyl transferase domain M2905_RS02100 PF00194 Eukaryotic-type carbonic anhydrase M2905_RS02105 PF02254 TrkA-N domain M2905_RS02105 PF02080 TrkA-C domain M2905_RS02105 PF00999 Sodium/hydrogen exchanger family M2905_RS02115 PF12849 PBP superfamily domain M2905_RS02120 PF00072 Response regulator receiver domain M2905_RS02120 PF00486 Transcriptional regulatory protein, C terminal M2905_RS02125 PF00989 PAS fold M2905_RS02125 PF00672 HAMP domain M2905_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS02125 PF18698 Histidine kinase sensor domain M2905_RS02125 PF00512 His Kinase A (phospho-acceptor) domain M2905_RS02130 PF00654 Voltage gated chloride channel M2905_RS02140 PF07687 Peptidase dimerisation domain M2905_RS02140 PF01546 Peptidase family M20/M25/M40 M2905_RS02145 PF02390 Putative methyltransferase M2905_RS02155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2905_RS02155 PF02378 Phosphotransferase system, EIIC M2905_RS02160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2905_RS02160 PF00874 PRD domain M2905_RS02160 PF05043 Mga helix-turn-helix domain M2905_RS02160 PF08279 HTH domain M2905_RS02160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2905_RS02165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2905_RS02170 PF08125 Mannitol dehydrogenase C-terminal domain M2905_RS02170 PF01232 Mannitol dehydrogenase Rossmann domain M2905_RS02175 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS02180 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS02185 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2905_RS02190 PF00005 ABC transporter M2905_RS02205 PF01757 Acyltransferase family M2905_RS02210 PF01594 AI-2E family transporter M2905_RS02215 PF06855 YozE SAM-like fold M2905_RS02220 PF01625 Peptide methionine sulfoxide reductase M2905_RS02225 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) M2905_RS02230 PF13472 GDSL-like Lipase/Acylhydrolase family M2905_RS02235 PF02645 Uncharacterised protein, DegV family COG1307 M2905_RS02240 PF03006 Haemolysin-III related M2905_RS02245 PF01177 Asp/Glu/Hydantoin racemase M2905_RS02255 PF02875 Mur ligase family, glutamate ligase domain M2905_RS02255 PF08245 Mur ligase middle domain M2905_RS02260 PF00733 Asparagine synthase M2905_RS02260 PF13537 Glutamine amidotransferase domain M2905_RS02265 PF00186 Dihydrofolate reductase M2905_RS02270 PF00303 Thymidylate synthase M2905_RS02275 PF12848 ABC transporter M2905_RS02275 PF00005 ABC transporter M2905_RS02275 PF16326 ABC transporter C-terminal domain M2905_RS02280 PF16657 Maltogenic Amylase, C-terminal domain M2905_RS02280 PF00128 Alpha amylase, catalytic domain M2905_RS02285 PF16657 Maltogenic Amylase, C-terminal domain M2905_RS02285 PF00128 Alpha amylase, catalytic domain M2905_RS02300 PF01743 Poly A polymerase head domain M2905_RS02300 PF13735 tRNA nucleotidyltransferase domain 2 putative M2905_RS02300 PF12627 Probable RNA and SrmB- binding site of polymerase A M2905_RS02305 PF03819 MazG nucleotide pyrophosphohydrolase domain M2905_RS02310 PF04963 Sigma-54 factor, core binding domain M2905_RS02310 PF00309 Sigma-54 factor, Activator interacting domain (AID) M2905_RS02310 PF04552 Sigma-54, DNA binding domain M2905_RS02335 PF01047 MarR family M2905_RS02335 PF00583 Acetyltransferase (GNAT) family M2905_RS02340 PF02687 FtsX-like permease family M2905_RS02345 PF00005 ABC transporter M2905_RS02350 PF00171 Aldehyde dehydrogenase family M2905_RS02355 PF13419 Haloacid dehalogenase-like hydrolase M2905_RS02360 PF03632 Glycosyl hydrolase family 65 central catalytic domain M2905_RS02360 PF03636 Glycosyl hydrolase family 65, N-terminal domain M2905_RS02360 PF03633 Glycosyl hydrolase family 65, C-terminal domain M2905_RS02365 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS02370 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS02375 PF01547 Bacterial extracellular solute-binding protein M2905_RS02380 PF01546 Peptidase family M20/M25/M40 M2905_RS02385 PF00085 Thioredoxin M2905_RS02390 PF05636 HIGH Nucleotidyl Transferase M2905_RS02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS02400 PF01554 MatE M2905_RS02405 PF00664 ABC transporter transmembrane region M2905_RS02405 PF00005 ABC transporter M2905_RS02410 PF00005 ABC transporter M2905_RS02410 PF00664 ABC transporter transmembrane region M2905_RS02415 PF03672 Uncharacterised protein family (UPF0154) M2905_RS02420 PF01261 Xylose isomerase-like TIM barrel M2905_RS02425 PF01479 S4 domain M2905_RS02425 PF00579 tRNA synthetases class I (W and Y) M2905_RS02430 PF00912 Transglycosylase M2905_RS02430 PF00905 Penicillin binding protein transpeptidase domain M2905_RS02435 PF00356 Bacterial regulatory proteins, lacI family M2905_RS02440 PF01321 Creatinase/Prolidase N-terminal domain M2905_RS02440 PF00557 Metallopeptidase family M24 M2905_RS02445 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS02450 PF01297 Zinc-uptake complex component A periplasmic M2905_RS02450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2905_RS02455 PF01556 DnaJ C terminal domain M2905_RS02455 PF00226 DnaJ domain M2905_RS02455 PF00684 DnaJ central domain M2905_RS02460 PF00012 Hsp70 protein M2905_RS02465 PF01025 GrpE M2905_RS02470 PF01628 HrcA protein C terminal domain M2905_RS02475 PF06969 HemN C-terminal domain M2905_RS02475 PF04055 Radical SAM superfamily M2905_RS02480 PF06574 FAD synthetase M2905_RS02480 PF01687 Riboflavin kinase M2905_RS02485 PF16198 tRNA pseudouridylate synthase B C-terminal domain M2905_RS02485 PF01509 TruB family pseudouridylate synthase (N terminal domain) M2905_RS02495 PF02033 Ribosome-binding factor A M2905_RS02500 PF00009 Elongation factor Tu GTP binding domain M2905_RS02500 PF11987 Translation-initiation factor 2 M2905_RS02500 PF04760 Translation initiation factor IF-2, N-terminal region M2905_RS02505 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M2905_RS02510 PF04296 Protein of unknown function (DUF448) M2905_RS02515 PF08529 NusA N-terminal domain M2905_RS02515 PF00575 S1 RNA binding domain M2905_RS02515 PF13184 NusA-like KH domain M2905_RS02520 PF17384 RimP C-terminal SH3 domain M2905_RS02520 PF02576 RimP N-terminal domain M2905_RS02530 PF00291 Pyridoxal-phosphate dependent enzyme M2905_RS02535 PF00596 Class II Aldolase and Adducin N-terminal domain M2905_RS02540 PF01008 Initiation factor 2 subunit family M2905_RS02545 PF01636 Phosphotransferase enzyme family M2905_RS02550 PF00690 Cation transporter/ATPase, N-terminus M2905_RS02550 PF00689 Cation transporting ATPase, C-terminus M2905_RS02590 PF06421 GTP-binding protein LepA C-terminus M2905_RS02590 PF00679 Elongation factor G C-terminus M2905_RS02590 PF00009 Elongation factor Tu GTP binding domain M2905_RS02590 PF03144 Elongation factor Tu domain 2 M2905_RS02600 PF00004 ATPase family associated with various cellular activities (AAA) M2905_RS02600 PF07724 AAA domain (Cdc48 subfamily) M2905_RS02600 PF17871 AAA lid domain M2905_RS02600 PF02861 Clp amino terminal domain, pathogenicity island component M2905_RS02600 PF10431 C-terminal, D2-small domain, of ClpB protein M2905_RS02615 PF07687 Peptidase dimerisation domain M2905_RS02615 PF01546 Peptidase family M20/M25/M40 M2905_RS02620 PF01784 NIF3 (NGG1p interacting factor 3) M2905_RS02625 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M2905_RS02640 PF04542 Sigma-70 region 2 M2905_RS02640 PF00140 Sigma-70 factor, region 1.2 M2905_RS02640 PF03979 Sigma-70 factor, region 1.1 M2905_RS02640 PF04539 Sigma-70 region 3 M2905_RS02640 PF04545 Sigma-70, region 4 M2905_RS02645 PF10410 DnaB-helicase binding domain of primase M2905_RS02645 PF08275 DNA primase catalytic core, N-terminal domain M2905_RS02645 PF01807 CHC2 zinc finger M2905_RS02650 PF05746 DALR anticodon binding domain M2905_RS02650 PF02092 Glycyl-tRNA synthetase beta subunit M2905_RS02655 PF02091 Glycyl-tRNA synthetase alpha subunit M2905_RS02660 PF11967 Recombination protein O N terminal M2905_RS02660 PF02565 Recombination protein O C terminal M2905_RS02665 PF07650 KH domain M2905_RS02665 PF01926 50S ribosome-binding GTPase M2905_RS02670 PF01219 Prokaryotic diacylglycerol kinase M2905_RS02675 PF02130 Uncharacterized protein family UPF0054 M2905_RS02680 PF07697 7TM-HD extracellular M2905_RS02680 PF01966 HD domain M2905_RS02680 PF07698 7TM receptor with intracellular HD hydrolase M2905_RS02685 PF02562 PhoH-like protein M2905_RS02690 PF04055 Radical SAM superfamily M2905_RS02695 PF00999 Sodium/hydrogen exchanger family M2905_RS02705 PF07556 Protein of unknown function (DUF1538) M2905_RS02710 PF17854 FtsK alpha domain M2905_RS02710 PF09397 Ftsk gamma domain M2905_RS02710 PF01580 FtsK/SpoIIIE family M2905_RS02715 PF01131 DNA topoisomerase M2905_RS02715 PF01751 Toprim domain M2905_RS02725 PF03180 NLPA lipoprotein M2905_RS02730 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS02735 PF00005 ABC transporter M2905_RS02735 PF09383 NIL domain M2905_RS02740 PF01597 Glycine cleavage H-protein M2905_RS02745 PF03960 ArsC family M2905_RS02750 PF01098 Cell cycle protein M2905_RS02775 PF00464 Serine hydroxymethyltransferase M2905_RS02780 PF03481 Putative GTP-binding controlling metal-binding M2905_RS02780 PF01300 Telomere recombination M2905_RS02785 PF05175 Methyltransferase small domain M2905_RS02785 PF17827 PrmC N-terminal domain M2905_RS02790 PF03462 PCRF domain M2905_RS02790 PF00472 RF-1 domain M2905_RS02795 PF00265 Thymidine kinase M2905_RS02800 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M2905_RS02805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS02805 PF00367 phosphotransferase system, EIIB M2905_RS02805 PF02378 Phosphotransferase system, EIIC M2905_RS02810 PF01746 tRNA (Guanine-1)-methyltransferase M2905_RS02815 PF05239 PRC-barrel domain M2905_RS02815 PF01782 RimM N-terminal domain M2905_RS02825 PF00886 Ribosomal protein S16 M2905_RS02830 PF02881 SRP54-type protein, helical bundle domain M2905_RS02830 PF02978 Signal peptide binding domain M2905_RS02830 PF00448 SRP54-type protein, GTPase domain M2905_RS02835 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M2905_RS02840 PF00293 NUDIX domain M2905_RS02845 PF00155 Aminotransferase class I and II M2905_RS02850 PF03989 DNA gyrase C-terminal domain, beta-propeller M2905_RS02850 PF00521 DNA gyrase/topoisomerase IV, subunit A M2905_RS02855 PF00204 DNA gyrase B M2905_RS02855 PF00986 DNA gyrase B subunit, carboxyl terminus M2905_RS02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS02855 PF01751 Toprim domain M2905_RS02860 PF00842 Alanine racemase, C-terminal domain M2905_RS02860 PF01168 Alanine racemase, N-terminal domain M2905_RS02865 PF02660 Glycerol-3-phosphate acyltransferase M2905_RS02870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2905_RS02870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2905_RS02880 PF06018 CodY GAF-like domain M2905_RS02880 PF08222 CodY helix-turn-helix domain M2905_RS02885 PF00004 ATPase family associated with various cellular activities (AAA) M2905_RS02885 PF07724 AAA domain (Cdc48 subfamily) M2905_RS02885 PF10431 C-terminal, D2-small domain, of ClpB protein M2905_RS02890 PF00227 Proteasome subunit M2905_RS02895 PF02899 Phage integrase, N-terminal SAM-like domain M2905_RS02895 PF00589 Phage integrase family M2905_RS02905 PF01134 Glucose inhibited division protein A M2905_RS02910 PF01131 DNA topoisomerase M2905_RS02910 PF01751 Toprim domain M2905_RS02910 PF01396 Topoisomerase DNA binding C4 zinc finger M2905_RS02915 PF02481 DNA recombination-mediator protein A M2905_RS02915 PF18255 DNA processing protein A sterile alpha motif domain M2905_RS02920 PF01351 Ribonuclease HII M2905_RS02925 PF01926 50S ribosome-binding GTPase M2905_RS02930 PF10502 Signal peptidase, peptidase S26 M2905_RS02935 PF01471 Putative peptidoglycan binding domain M2905_RS02935 PF17820 PDZ domain M2905_RS02935 PF03572 Peptidase family S41 M2905_RS02940 PF00391 PEP-utilising enzyme, mobile domain M2905_RS02940 PF00224 Pyruvate kinase, barrel domain M2905_RS02940 PF02887 Pyruvate kinase, alpha/beta domain M2905_RS02945 PF00365 Phosphofructokinase M2905_RS02950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2905_RS02950 PF14579 Helix-hairpin-helix motif M2905_RS02950 PF02811 PHP domain M2905_RS02950 PF01336 OB-fold nucleic acid binding domain M2905_RS02950 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2905_RS02960 PF07690 Major Facilitator Superfamily M2905_RS02965 PF00232 Glycosyl hydrolase family 1 M2905_RS02970 PF02645 Uncharacterised protein, DegV family COG1307 M2905_RS02975 PF03816 Cell envelope-related transcriptional attenuator domain M2905_RS02980 PF01202 Shikimate kinase M2905_RS02985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2905_RS02990 PF01264 Chorismate synthase M2905_RS02995 PF01761 3-dehydroquinate synthase M2905_RS03000 PF18152 DAHP synthase ferredoxin-like domain M2905_RS03000 PF00793 DAHP synthetase I family M2905_RS03005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M2905_RS03005 PF08501 Shikimate dehydrogenase substrate binding domain M2905_RS03020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M2905_RS03020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M2905_RS03025 PF01812 5-formyltetrahydrofolate cyclo-ligase family M2905_RS03035 PF02347 Glycine cleavage system P-protein M2905_RS03040 PF02347 Glycine cleavage system P-protein M2905_RS03045 PF01597 Glycine cleavage H-protein M2905_RS03050 PF08669 Glycine cleavage T-protein C-terminal barrel domain M2905_RS03050 PF01571 Aminomethyltransferase folate-binding domain M2905_RS03065 PF00924 Mechanosensitive ion channel M2905_RS03070 PF05343 M42 glutamyl aminopeptidase M2905_RS03075 PF00860 Permease family M2905_RS03080 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M2905_RS03085 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M2905_RS03090 PF01039 Carboxyl transferase domain M2905_RS03095 PF06857 Malonate decarboxylase delta subunit (MdcD) M2905_RS03100 PF16957 Malonate decarboxylase, alpha subunit, transporter M2905_RS03105 PF00698 Acyl transferase domain M2905_RS03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2905_RS03110 PF03466 LysR substrate binding domain M2905_RS03120 PF00005 ABC transporter M2905_RS03120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS03125 PF00005 ABC transporter M2905_RS03125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS03130 PF12911 N-terminal TM domain of oligopeptide transport permease C M2905_RS03130 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS03140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2905_RS03145 PF07687 Peptidase dimerisation domain M2905_RS03145 PF01546 Peptidase family M20/M25/M40 M2905_RS03155 PF12850 Calcineurin-like phosphoesterase superfamily domain M2905_RS03160 PF01138 3' exoribonuclease family, domain 1 M2905_RS03160 PF03725 3' exoribonuclease family, domain 2 M2905_RS03165 PF01177 Asp/Glu/Hydantoin racemase M2905_RS03170 PF03483 B3/4 domain M2905_RS03170 PF01588 Putative tRNA binding domain M2905_RS03170 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M2905_RS03170 PF03484 tRNA synthetase B5 domain M2905_RS03170 PF03147 Ferredoxin-fold anticodon binding domain M2905_RS03175 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M2905_RS03175 PF01409 tRNA synthetases class II core domain (F) M2905_RS03180 PF02920 DNA binding domain of tn916 integrase M2905_RS03180 PF00589 Phage integrase family M2905_RS03185 PF09035 Excisionase from transposon Tn916 M2905_RS03220 PF00679 Elongation factor G C-terminus M2905_RS03220 PF14492 Elongation Factor G, domain II M2905_RS03220 PF03764 Elongation factor G, domain IV M2905_RS03220 PF00009 Elongation factor Tu GTP binding domain M2905_RS03235 PF00877 NlpC/P60 family M2905_RS03265 PF02486 Replication initiation factor M2905_RS03265 PF18106 Rolling Circle replication initiation protein N-terminal domain M2905_RS03290 PF01638 HxlR-like helix-turn-helix M2905_RS03300 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2905_RS03300 PF00588 SpoU rRNA Methylase family M2905_RS03305 PF00708 Acylphosphatase M2905_RS03310 PF02096 60Kd inner membrane protein M2905_RS03320 PF00512 His Kinase A (phospho-acceptor) domain M2905_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS03320 PF18719 ArlS sensor domain M2905_RS03325 PF00486 Transcriptional regulatory protein, C terminal M2905_RS03325 PF00072 Response regulator receiver domain M2905_RS03330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2905_RS03330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2905_RS03335 PF01783 Ribosomal L32p protein family M2905_RS03345 PF07319 Primosomal protein DnaI N-terminus M2905_RS03345 PF01695 IstB-like ATP binding protein M2905_RS03355 PF03477 ATP cone domain M2905_RS03360 PF01121 Dephospho-CoA kinase M2905_RS03365 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M2905_RS03365 PF06827 Zinc finger found in FPG and IleRS M2905_RS03365 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M2905_RS03370 PF01367 5'-3' exonuclease, C-terminal SAM fold M2905_RS03370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M2905_RS03370 PF00476 DNA polymerase family A M2905_RS03375 PF01027 Inhibitor of apoptosis-promoting Bax1 M2905_RS03380 PF01225 Mur ligase family, catalytic domain M2905_RS03380 PF02875 Mur ligase family, glutamate ligase domain M2905_RS03380 PF08245 Mur ligase middle domain M2905_RS03395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2905_RS03395 PF02272 DHHA1 domain M2905_RS03395 PF01411 tRNA synthetases class II (A) M2905_RS03400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2905_RS03400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2905_RS03400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2905_RS03400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2905_RS03410 PF02457 DisA bacterial checkpoint controller nucleotide-binding M2905_RS03415 PF10263 SprT-like family M2905_RS03420 PF16921 Tex protein YqgF-like domain M2905_RS03420 PF09371 Tex-like protein N-terminal domain M2905_RS03420 PF00575 S1 RNA binding domain M2905_RS03420 PF17674 HHH domain M2905_RS03430 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS03430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS03435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2905_RS03435 PF02817 e3 binding domain M2905_RS03435 PF00364 Biotin-requiring enzyme M2905_RS03440 PF02779 Transketolase, pyrimidine binding domain M2905_RS03440 PF02780 Transketolase, C-terminal domain M2905_RS03445 PF00676 Dehydrogenase E1 component M2905_RS03450 PF00690 Cation transporter/ATPase, N-terminus M2905_RS03450 PF00689 Cation transporting ATPase, C-terminus M2905_RS03455 PF02386 Cation transport protein M2905_RS03460 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M2905_RS03465 PF00248 Aldo/keto reductase family M2905_RS03475 PF02222 ATP-grasp domain M2905_RS03475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M2905_RS03475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2905_RS03480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2905_RS03480 PF13457 GW (Gly-Tryp) dipeptide domain M2905_RS03485 PF02557 D-alanyl-D-alanine carboxypeptidase M2905_RS03495 PF06081 Aromatic acid exporter family member 1 M2905_RS03495 PF11728 Putative aromatic acid exporter C-terminal domain M2905_RS03505 PF01145 SPFH domain / Band 7 family M2905_RS03505 PF15975 Flotillin M2905_RS03520 PF00005 ABC transporter M2905_RS03535 PF05066 HB1, ASXL, restriction endonuclease HTH domain M2905_RS03545 PF03099 Biotin/lipoate A/B protein ligase family M2905_RS03550 PF01966 HD domain M2905_RS03560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2905_RS03570 PF09424 Yqey-like protein M2905_RS03575 PF01165 Ribosomal protein S21 M2905_RS03580 PF01475 Ferric uptake regulator family M2905_RS03585 PF03618 Kinase/pyrophosphorylase M2905_RS03590 PF00005 ABC transporter M2905_RS03595 PF02653 Branched-chain amino acid transport system / permease component M2905_RS03610 PF05670 NFACT protein RNA binding domain M2905_RS03615 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M2905_RS03630 PF01895 PhoU domain M2905_RS03635 PF00005 ABC transporter M2905_RS03640 PF00005 ABC transporter M2905_RS03645 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS03650 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS03655 PF12849 PBP superfamily domain M2905_RS03660 PF18075 FtsX extracellular domain M2905_RS03660 PF02687 FtsX-like permease family M2905_RS03665 PF00005 ABC transporter M2905_RS03675 PF01043 SecA preprotein cross-linking domain M2905_RS03675 PF07516 SecA Wing and Scaffold domain M2905_RS03675 PF07517 SecA DEAD-like domain M2905_RS03675 PF02810 SEC-C motif M2905_RS03680 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M2905_RS03680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M2905_RS03690 PF00271 Helicase conserved C-terminal domain M2905_RS03690 PF04851 Type III restriction enzyme, res subunit M2905_RS03695 PF12146 Serine aminopeptidase, S33 M2905_RS03705 PF09186 Domain of unknown function (DUF1949) M2905_RS03705 PF01205 Uncharacterized protein family UPF0029 M2905_RS03710 PF00392 Bacterial regulatory proteins, gntR family M2905_RS03710 PF07702 UTRA domain M2905_RS03715 PF12705 PD-(D/E)XK nuclease superfamily M2905_RS03715 PF00580 UvrD/REP helicase N-terminal domain M2905_RS03715 PF13361 UvrD-like helicase C-terminal domain M2905_RS03720 PF12705 PD-(D/E)XK nuclease superfamily M2905_RS03725 PF10502 Signal peptidase, peptidase S26 M2905_RS03730 PF02779 Transketolase, pyrimidine binding domain M2905_RS03730 PF02780 Transketolase, C-terminal domain M2905_RS03730 PF00456 Transketolase, thiamine diphosphate binding domain M2905_RS03735 PF05979 Bacterial protein of unknown function (DUF896) M2905_RS03740 PF01726 LexA DNA binding domain M2905_RS03740 PF00717 Peptidase S24-like M2905_RS03750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M2905_RS03750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M2905_RS03755 PF13419 Haloacid dehalogenase-like hydrolase M2905_RS03760 PF01790 Prolipoprotein diacylglyceryl transferase M2905_RS03765 PF07475 HPr Serine kinase C-terminal domain M2905_RS03765 PF02603 HPr Serine kinase N terminus M2905_RS03795 PF00571 CBS domain M2905_RS03800 PF00005 ABC transporter M2905_RS03805 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2905_RS03805 PF00005 ABC transporter M2905_RS03810 PF02653 Branched-chain amino acid transport system / permease component M2905_RS03810 PF11862 Domain of unknown function (DUF3382) M2905_RS03815 PF02653 Branched-chain amino acid transport system / permease component M2905_RS03820 PF13458 Periplasmic binding protein M2905_RS03830 PF01809 Putative membrane protein insertion efficiency factor M2905_RS03840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2905_RS03850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M2905_RS03850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M2905_RS03855 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2905_RS03855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2905_RS03860 PF00231 ATP synthase M2905_RS03865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2905_RS03865 PF00306 ATP synthase alpha/beta chain, C terminal domain M2905_RS03865 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2905_RS03870 PF00213 ATP synthase delta (OSCP) subunit M2905_RS03875 PF00430 ATP synthase B/B' CF(0) M2905_RS03880 PF00137 ATP synthase subunit C M2905_RS03885 PF00119 ATP synthase A chain M2905_RS03890 PF01668 SmpB protein M2905_RS03895 PF17876 Cold shock domain M2905_RS03895 PF08206 Ribonuclease B OB domain M2905_RS03895 PF00773 RNB domain M2905_RS03895 PF00575 S1 RNA binding domain M2905_RS03900 PF12146 Serine aminopeptidase, S33 M2905_RS03905 PF03840 Preprotein translocase SecG subunit M2905_RS03910 PF03841 L-seryl-tRNA selenium transferase M2905_RS03915 PF09107 Elongation factor SelB, winged helix M2905_RS03915 PF00009 Elongation factor Tu GTP binding domain M2905_RS03915 PF03144 Elongation factor Tu domain 2 M2905_RS03915 PF09106 Elongation factor SelB, winged helix M2905_RS03925 PF00586 AIR synthase related protein, N-terminal domain M2905_RS03925 PF02769 AIR synthase related protein, C-terminal domain M2905_RS03940 PF04226 Transglycosylase associated protein M2905_RS03985 PF00575 S1 RNA binding domain M2905_RS03990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2905_RS03995 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS04000 PF04608 Phosphatidylglycerophosphatase A M2905_RS04010 PF13344 Haloacid dehalogenase-like hydrolase M2905_RS04015 PF06265 Protein of unknown function (DUF1027) M2905_RS04025 PF13350 Tyrosine phosphatase family M2905_RS04040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2905_RS04045 PF00005 ABC transporter M2905_RS04045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS04050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2905_RS04050 PF00005 ABC transporter M2905_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04055 PF12911 N-terminal TM domain of oligopeptide transport permease C M2905_RS04060 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04075 PF00210 Ferritin-like domain M2905_RS04080 PF00085 Thioredoxin M2905_RS04085 PF01713 Smr domain M2905_RS04085 PF00488 MutS domain V M2905_RS04095 PF05164 Cell division protein ZapA M2905_RS04100 PF01351 Ribonuclease HII M2905_RS04100 PF11858 Domain of unknown function (DUF3378) M2905_RS04105 PF06486 Protein of unknown function (DUF1093) M2905_RS04115 PF11798 IMS family HHH motif M2905_RS04115 PF11799 impB/mucB/samB family C-terminal domain M2905_RS04115 PF00817 impB/mucB/samB family M2905_RS04125 PF06949 Protein of unknown function (DUF1292) M2905_RS04130 PF03652 Holliday junction resolvase M2905_RS04135 PF06135 IreB regulatory phosphoprotein M2905_RS04140 PF14794 Domain of unknown function (DUF4479) M2905_RS04140 PF01588 Putative tRNA binding domain M2905_RS04145 PF00582 Universal stress protein family M2905_RS04150 PF00085 Thioredoxin M2905_RS04155 PF05343 M42 glutamyl aminopeptidase M2905_RS04165 PF02390 Putative methyltransferase M2905_RS04170 PF01636 Phosphotransferase enzyme family M2905_RS04180 PF00005 ABC transporter M2905_RS04185 PF01230 HIT domain M2905_RS04195 PF13145 PPIC-type PPIASE domain M2905_RS04200 PF01966 HD domain M2905_RS04205 PF06133 Control of competence regulator ComK, YlbF/YmcA M2905_RS04210 PF00912 Transglycosylase M2905_RS04210 PF00905 Penicillin binding protein transpeptidase domain M2905_RS04215 PF01479 S4 domain M2905_RS04215 PF00849 RNA pseudouridylate synthase M2905_RS04220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2905_RS04220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2905_RS04220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2905_RS04220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2905_RS04225 PF01316 Arginine repressor, DNA binding domain M2905_RS04225 PF02863 Arginine repressor, C-terminal domain M2905_RS04230 PF03485 Arginyl tRNA synthetase N terminal domain M2905_RS04230 PF05746 DALR anticodon binding domain M2905_RS04230 PF00750 tRNA synthetases class I (R) M2905_RS04235 PF06177 QueT transporter M2905_RS04245 PF00005 ABC transporter M2905_RS04250 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2905_RS04255 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04260 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS04260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS04265 PF04143 Sulphur transport M2905_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2905_RS04270 PF03466 LysR substrate binding domain M2905_RS04275 PF00781 Diacylglycerol kinase catalytic domain M2905_RS04285 PF14490 Helix-hairpin-helix containing domain M2905_RS04285 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M2905_RS04285 PF13538 UvrD-like helicase C-terminal domain M2905_RS04290 PF05362 Lon protease (S16) C-terminal proteolytic domain M2905_RS04290 PF13180 PDZ domain M2905_RS04295 PF01467 Cytidylyltransferase-like M2905_RS04305 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M2905_RS04320 PF00682 HMGL-like M2905_RS04320 PF02785 Biotin carboxylase C-terminal domain M2905_RS04320 PF00364 Biotin-requiring enzyme M2905_RS04320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2905_RS04320 PF02436 Conserved carboxylase domain M2905_RS04320 PF00289 Biotin carboxylase, N-terminal domain M2905_RS04325 PF01098 Cell cycle protein M2905_RS04330 PF07408 Protein of unknown function (DUF1507) M2905_RS04335 PF00890 FAD binding domain M2905_RS04335 PF14537 Cytochrome c3 M2905_RS04340 PF01226 Formate/nitrite transporter M2905_RS04345 PF03180 NLPA lipoprotein M2905_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04355 PF00005 ABC transporter M2905_RS04355 PF09383 NIL domain M2905_RS04360 PF03070 TENA/THI-4/PQQC family M2905_RS04365 PF09084 NMT1/THI5 like M2905_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04375 PF00005 ABC transporter M2905_RS04385 PF02581 Thiamine monophosphate synthase M2905_RS04390 PF08543 Phosphomethylpyrimidine kinase M2905_RS04395 PF02110 Hydroxyethylthiazole kinase family M2905_RS04400 PF10431 C-terminal, D2-small domain, of ClpB protein M2905_RS04400 PF06689 ClpX C4-type zinc finger M2905_RS04400 PF07724 AAA domain (Cdc48 subfamily) M2905_RS04405 PF05697 Bacterial trigger factor protein (TF) M2905_RS04405 PF05698 Bacterial trigger factor protein (TF) C-terminus M2905_RS04405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M2905_RS04415 PF06271 RDD family M2905_RS04420 PF01343 Peptidase family S49 M2905_RS04425 PF08796 Protein of unknown function (DUF1797) M2905_RS04430 PF01301 Glycosyl hydrolases family 35 M2905_RS04435 PF03610 PTS system fructose IIA component M2905_RS04440 PF03613 PTS system mannose/fructose/sorbose family IID component M2905_RS04445 PF03609 PTS system sorbose-specific iic component M2905_RS04450 PF03830 PTS system sorbose subfamily IIB component M2905_RS04455 PF00294 pfkB family carbohydrate kinase M2905_RS04460 PF01791 DeoC/LacD family aldolase M2905_RS04465 PF01380 SIS domain M2905_RS04470 PF00392 Bacterial regulatory proteins, gntR family M2905_RS04470 PF07702 UTRA domain M2905_RS04475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2905_RS04475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2905_RS04485 PF13439 Glycosyltransferase Family 4 M2905_RS04485 PF00534 Glycosyl transferases group 1 M2905_RS04490 PF00534 Glycosyl transferases group 1 M2905_RS04490 PF13439 Glycosyltransferase Family 4 M2905_RS04495 PF05524 PEP-utilising enzyme, N-terminal M2905_RS04495 PF00391 PEP-utilising enzyme, mobile domain M2905_RS04495 PF02896 PEP-utilising enzyme, TIM barrel domain M2905_RS04500 PF00381 PTS HPr component phosphorylation site M2905_RS04510 PF07724 AAA domain (Cdc48 subfamily) M2905_RS04510 PF00004 ATPase family associated with various cellular activities (AAA) M2905_RS04510 PF17871 AAA lid domain M2905_RS04510 PF10431 C-terminal, D2-small domain, of ClpB protein M2905_RS04520 PF06838 Methionine gamma-lyase M2905_RS04525 PF16360 GTP-binding GTPase Middle Region M2905_RS04525 PF13167 GTP-binding GTPase N-terminal M2905_RS04525 PF01926 50S ribosome-binding GTPase M2905_RS04535 PF03009 Glycerophosphoryl diester phosphodiesterase family M2905_RS04545 PF00313 'Cold-shock' DNA-binding domain M2905_RS04550 PF04002 RadC-like JAB domain M2905_RS04555 PF13419 Haloacid dehalogenase-like hydrolase M2905_RS04560 PF08245 Mur ligase middle domain M2905_RS04560 PF02875 Mur ligase family, glutamate ligase domain M2905_RS04565 PF08264 Anticodon-binding domain of tRNA M2905_RS04565 PF10458 Valyl tRNA synthetase tRNA binding arm M2905_RS04565 PF00133 tRNA synthetases class I (I, L, M and V) M2905_RS04570 PF08534 Redoxin M2905_RS04575 PF02629 CoA binding domain M2905_RS04575 PF06971 Putative DNA-binding protein N-terminus M2905_RS04580 PF02568 Thiamine biosynthesis protein (ThiI) M2905_RS04580 PF02926 THUMP domain M2905_RS04585 PF00266 Aminotransferase class-V M2905_RS04590 PF06160 Septation ring formation regulator, EzrA M2905_RS04600 PF01904 Protein of unknown function DUF72 M2905_RS04605 PF17763 Glutaminase/Asparaginase C-terminal domain M2905_RS04605 PF00710 Asparaginase, N-terminal M2905_RS04615 PF00342 Phosphoglucose isomerase M2905_RS04620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M2905_RS04620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M2905_RS04635 PF12833 Helix-turn-helix domain M2905_RS04640 PF07690 Major Facilitator Superfamily M2905_RS04645 PF01546 Peptidase family M20/M25/M40 M2905_RS04645 PF07687 Peptidase dimerisation domain M2905_RS04650 PF04073 Aminoacyl-tRNA editing domain M2905_RS04655 PF01487 Type I 3-dehydroquinase M2905_RS04660 PF17785 PUA-like domain M2905_RS04660 PF10672 S-adenosylmethionine-dependent methyltransferase M2905_RS04665 PF00884 Sulfatase M2905_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS04680 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2905_RS04685 PF01425 Amidase M2905_RS04690 PF00884 Sulfatase M2905_RS04695 PF02540 NAD synthase M2905_RS04700 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M2905_RS04700 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M2905_RS04700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M2905_RS04705 PF00588 SpoU rRNA Methylase family M2905_RS04710 PF08241 Methyltransferase domain M2905_RS04715 PF03932 CutC family M2905_RS04725 PF01769 Divalent cation transporter M2905_RS04725 PF00571 CBS domain M2905_RS04725 PF03448 MgtE intracellular N domain M2905_RS04730 PF00849 RNA pseudouridylate synthase M2905_RS04735 PF01513 ATP-NAD kinase M2905_RS04740 PF04607 Region found in RelA / SpoT proteins M2905_RS04755 PF16658 Class II release factor RF3, C-terminal domain M2905_RS04755 PF00009 Elongation factor Tu GTP binding domain M2905_RS04755 PF03144 Elongation factor Tu domain 2 M2905_RS04760 PF01022 Bacterial regulatory protein, arsR family M2905_RS04765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2905_RS04765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2905_RS04765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2905_RS04765 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2905_RS04770 PF02687 FtsX-like permease family M2905_RS04770 PF12704 MacB-like periplasmic core domain M2905_RS04770 PF00005 ABC transporter M2905_RS04775 PF02687 FtsX-like permease family M2905_RS04775 PF12704 MacB-like periplasmic core domain M2905_RS04775 PF00005 ABC transporter M2905_RS04785 PF00313 'Cold-shock' DNA-binding domain M2905_RS04790 PF13407 Periplasmic binding protein domain M2905_RS04795 PF02653 Branched-chain amino acid transport system / permease component M2905_RS04800 PF00005 ABC transporter M2905_RS04805 PF05025 RbsD / FucU transport protein family M2905_RS04810 PF00294 pfkB family carbohydrate kinase M2905_RS04815 PF00356 Bacterial regulatory proteins, lacI family M2905_RS04820 PF00571 CBS domain M2905_RS04820 PF01595 Cyclin M transmembrane N-terminal domain M2905_RS04820 PF03471 Transporter associated domain M2905_RS04825 PF01594 AI-2E family transporter M2905_RS04845 PF04167 Protein of unknown function (DUF402) M2905_RS04890 PF09924 Uncharacterised conserved protein (DUF2156) M2905_RS04890 PF03706 Lysylphosphatidylglycerol synthase TM region M2905_RS04895 PF00730 HhH-GPD superfamily base excision DNA repair protein M2905_RS04895 PF14815 NUDIX domain M2905_RS04900 PF02631 RecX family M2905_RS04925 PF00483 Nucleotidyl transferase M2905_RS04930 PF03816 Cell envelope-related transcriptional attenuator domain M2905_RS04945 PF03023 Lipid II flippase MurJ M2905_RS04955 PF01370 NAD dependent epimerase/dehydratase family M2905_RS04960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M2905_RS04960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M2905_RS04960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M2905_RS04965 PF00534 Glycosyl transferases group 1 M2905_RS04965 PF13439 Glycosyltransferase Family 4 M2905_RS04975 PF02397 Bacterial sugar transferase M2905_RS04980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M2905_RS04985 PF02719 Polysaccharide biosynthesis protein M2905_RS04995 PF13614 AAA domain M2905_RS05000 PF13807 G-rich domain on putative tyrosine kinase M2905_RS05000 PF02706 Chain length determinant protein M2905_RS05030 PF01520 N-acetylmuramoyl-L-alanine amidase M2905_RS05055 PF04321 RmlD substrate binding domain M2905_RS05060 PF16363 GDP-mannose 4,6 dehydratase M2905_RS05065 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M2905_RS05070 PF00483 Nucleotidyl transferase M2905_RS05075 PF01501 Glycosyl transferase family 8 M2905_RS05075 PF00535 Glycosyl transferase family 2 M2905_RS05090 PF03816 Cell envelope-related transcriptional attenuator domain M2905_RS05095 PF00953 Glycosyl transferase family 4 M2905_RS05100 PF00535 Glycosyl transferase family 2 M2905_RS05105 PF00535 Glycosyl transferase family 2 M2905_RS05110 PF08239 Bacterial SH3 domain M2905_RS05110 PF00005 ABC transporter M2905_RS05115 PF01061 ABC-2 type transporter M2905_RS05120 PF00884 Sulfatase M2905_RS05125 PF03631 Virulence factor BrkB M2905_RS05130 PF00557 Metallopeptidase family M24 M2905_RS05135 PF00258 Flavodoxin M2905_RS05145 PF02073 Thermophilic metalloprotease (M29) M2905_RS05170 PF02378 Phosphotransferase system, EIIC M2905_RS05175 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M2905_RS05180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2905_RS05185 PF03610 PTS system fructose IIA component M2905_RS05185 PF00874 PRD domain M2905_RS05185 PF00158 Sigma-54 interaction domain M2905_RS05190 PF00270 DEAD/DEAH box helicase M2905_RS05190 PF00271 Helicase conserved C-terminal domain M2905_RS05195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS05195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS05205 PF00664 ABC transporter transmembrane region M2905_RS05205 PF00005 ABC transporter M2905_RS05210 PF00005 ABC transporter M2905_RS05210 PF00664 ABC transporter transmembrane region M2905_RS05215 PF07288 Protein of unknown function (DUF1447) M2905_RS05220 PF00753 Metallo-beta-lactamase superfamily M2905_RS05220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2905_RS05220 PF17770 Ribonuclease J C-terminal domain M2905_RS05225 PF00581 Rhodanese-like domain M2905_RS05230 PF00480 ROK family M2905_RS05235 PF01694 Rhomboid family M2905_RS05250 PF00471 Ribosomal protein L33 M2905_RS05255 PF03717 Penicillin-binding Protein dimerisation domain M2905_RS05255 PF00905 Penicillin binding protein transpeptidase domain M2905_RS05260 PF03129 Anticodon binding domain M2905_RS05260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2905_RS05260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2905_RS05260 PF02824 TGS domain M2905_RS05270 PF00013 KH domain M2905_RS05270 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M2905_RS05270 PF03725 3' exoribonuclease family, domain 2 M2905_RS05270 PF00575 S1 RNA binding domain M2905_RS05270 PF01138 3' exoribonuclease family, domain 1 M2905_RS05275 PF00312 Ribosomal protein S15 M2905_RS05280 PF01327 Polypeptide deformylase M2905_RS05285 PF16874 Glycosyl hydrolase family 36 C-terminal domain M2905_RS05285 PF16875 Glycosyl hydrolase family 36 N-terminal domain M2905_RS05285 PF00485 Phosphoribulokinase / Uridine kinase family M2905_RS05290 PF02311 AraC-like ligand binding domain M2905_RS05290 PF12833 Helix-turn-helix domain M2905_RS05300 PF02872 5'-nucleotidase, C-terminal domain M2905_RS05300 PF00149 Calcineurin-like phosphoesterase M2905_RS05305 PF01418 Helix-turn-helix domain, rpiR family M2905_RS05305 PF01380 SIS domain M2905_RS05310 PF00206 Lyase M2905_RS05310 PF10415 Fumarase C C-terminus M2905_RS05315 PF03949 Malic enzyme, NAD binding domain M2905_RS05315 PF00390 Malic enzyme, N-terminal domain M2905_RS05320 PF10397 Adenylosuccinate lyase C-terminus M2905_RS05320 PF00206 Lyase M2905_RS05325 PF00367 phosphotransferase system, EIIB M2905_RS05325 PF02378 Phosphotransferase system, EIIC M2905_RS05330 PF00248 Aldo/keto reductase family M2905_RS05335 PF00962 Adenosine/AMP deaminase M2905_RS05340 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS05345 PF08402 TOBE domain M2905_RS05345 PF00005 ABC transporter M2905_RS05355 PF00072 Response regulator receiver domain M2905_RS05355 PF12833 Helix-turn-helix domain M2905_RS05360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS05360 PF06580 Histidine kinase M2905_RS05365 PF00118 TCP-1/cpn60 chaperonin family M2905_RS05370 PF00166 Chaperonin 10 Kd subunit M2905_RS05375 PF02629 CoA binding domain M2905_RS05375 PF06971 Putative DNA-binding protein N-terminus M2905_RS05380 PF00005 ABC transporter M2905_RS05380 PF16326 ABC transporter C-terminal domain M2905_RS05380 PF12848 ABC transporter M2905_RS05390 PF00356 Bacterial regulatory proteins, lacI family M2905_RS05400 PF02272 DHHA1 domain M2905_RS05400 PF01368 DHH family M2905_RS05405 PF07085 DRTGG domain M2905_RS05405 PF00571 CBS domain M2905_RS05405 PF03061 Thioesterase superfamily M2905_RS05405 PF00392 Bacterial regulatory proteins, gntR family M2905_RS05410 PF07690 Major Facilitator Superfamily M2905_RS05415 PF00753 Metallo-beta-lactamase superfamily M2905_RS05415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2905_RS05415 PF17770 Ribonuclease J C-terminal domain M2905_RS05420 PF00664 ABC transporter transmembrane region M2905_RS05420 PF00005 ABC transporter M2905_RS05425 PF12419 SNF2 Helicase protein M2905_RS05425 PF00176 SNF2 family N-terminal domain M2905_RS05425 PF00271 Helicase conserved C-terminal domain M2905_RS05430 PF01553 Acyltransferase M2905_RS05435 PF05175 Methyltransferase small domain M2905_RS05440 PF01541 GIY-YIG catalytic domain M2905_RS05460 PF02082 Transcriptional regulator M2905_RS05465 PF03606 C4-dicarboxylate anaerobic carrier M2905_RS05470 PF02733 Dak1 domain M2905_RS05475 PF02734 DAK2 domain M2905_RS05480 PF03610 PTS system fructose IIA component M2905_RS05485 PF00465 Iron-containing alcohol dehydrogenase M2905_RS05490 PF02733 Dak1 domain M2905_RS05505 PF00186 Dihydrofolate reductase M2905_RS05510 PF00583 Acetyltransferase (GNAT) family M2905_RS05515 PF01636 Phosphotransferase enzyme family M2905_RS05520 PF00440 Bacterial regulatory proteins, tetR family M2905_RS05520 PF14278 Transcriptional regulator C-terminal region M2905_RS05530 PF00293 NUDIX domain M2905_RS05535 PF05857 TraX protein M2905_RS05540 PF01791 DeoC/LacD family aldolase M2905_RS05545 PF04198 Putative sugar-binding domain M2905_RS05550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS05550 PF13192 Thioredoxin domain M2905_RS05555 PF00578 AhpC/TSA family M2905_RS05560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M2905_RS05560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M2905_RS05565 PF00230 Major intrinsic protein M2905_RS05570 PF01266 FAD dependent oxidoreductase M2905_RS05570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M2905_RS05575 PF02803 Thiolase, C-terminal domain M2905_RS05575 PF00108 Thiolase, N-terminal domain M2905_RS05580 PF00005 ABC transporter M2905_RS05585 PF02687 FtsX-like permease family M2905_RS05590 PF01906 Putative heavy-metal-binding M2905_RS05595 PF00753 Metallo-beta-lactamase superfamily M2905_RS05605 PF00817 impB/mucB/samB family M2905_RS05605 PF11799 impB/mucB/samB family C-terminal domain M2905_RS05750 PF01336 OB-fold nucleic acid binding domain M2905_RS05750 PF00152 tRNA synthetases class II (D, K and N) M2905_RS05755 PF01207 Dihydrouridine synthase (Dus) M2905_RS05760 PF01430 Hsp33 protein M2905_RS05765 PF00004 ATPase family associated with various cellular activities (AAA) M2905_RS05765 PF17862 AAA+ lid domain M2905_RS05765 PF06480 FtsH Extracellular M2905_RS05765 PF01434 Peptidase family M41 M2905_RS05770 PF00156 Phosphoribosyl transferase domain M2905_RS05775 PF11734 TilS substrate C-terminal domain M2905_RS05775 PF01171 PP-loop family M2905_RS05780 PF00575 S1 RNA binding domain M2905_RS05790 PF01479 S4 domain M2905_RS05795 PF01943 Polysaccharide biosynthesis protein M2905_RS05795 PF14667 Polysaccharide biosynthesis C-terminal domain M2905_RS05800 PF02559 CarD-like/TRCF domain M2905_RS05800 PF00270 DEAD/DEAH box helicase M2905_RS05800 PF03461 TRCF domain M2905_RS05800 PF00271 Helicase conserved C-terminal domain M2905_RS05800 PF17757 UvrB interaction domain M2905_RS05805 PF01195 Peptidyl-tRNA hydrolase M2905_RS05815 PF00462 Glutaredoxin M2905_RS05820 PF07972 NrdI Flavodoxin like M2905_RS05825 PF02867 Ribonucleotide reductase, barrel domain M2905_RS05825 PF00317 Ribonucleotide reductase, all-alpha domain M2905_RS05825 PF08343 Ribonucleotide reductase N-terminal M2905_RS05830 PF00268 Ribonucleotide reductase, small chain M2905_RS05840 PF04127 DNA / pantothenate metabolism flavoprotein M2905_RS05840 PF02441 Flavoprotein M2905_RS05845 PF02441 Flavoprotein M2905_RS05850 PF12822 ECF transporter, substrate-specific component M2905_RS05855 PF05389 Negative regulator of genetic competence (MecA) M2905_RS05860 PF03960 ArsC family M2905_RS05865 PF00579 tRNA synthetases class I (W and Y) M2905_RS05870 PF10437 Bacterial lipoate protein ligase C-terminus M2905_RS05870 PF03099 Biotin/lipoate A/B protein ligase family M2905_RS05875 PF12706 Beta-lactamase superfamily domain M2905_RS05880 PF05343 M42 glutamyl aminopeptidase M2905_RS05890 PF03477 ATP cone domain M2905_RS05890 PF13597 Anaerobic ribonucleoside-triphosphate reductase M2905_RS05895 PF00453 Ribosomal protein L20 M2905_RS05900 PF01632 Ribosomal protein L35 M2905_RS05905 PF00707 Translation initiation factor IF-3, C-terminal domain M2905_RS05905 PF05198 Translation initiation factor IF-3, N-terminal domain M2905_RS05910 PF03167 Uracil DNA glycosylase superfamily M2905_RS05915 PF00132 Bacterial transferase hexapeptide (six repeats) M2905_RS05925 PF02525 Flavodoxin-like fold M2905_RS05930 PF00107 Zinc-binding dehydrogenase M2905_RS05930 PF08240 Alcohol dehydrogenase GroES-like domain M2905_RS05935 PF08439 Oligopeptidase F M2905_RS05935 PF01432 Peptidase family M3 M2905_RS05945 PF00860 Permease family M2905_RS05955 PF00485 Phosphoribulokinase / Uridine kinase family M2905_RS05960 PF08331 Domain of unknown function (DUF1730) M2905_RS05970 PF00690 Cation transporter/ATPase, N-terminus M2905_RS05970 PF00689 Cation transporting ATPase, C-terminus M2905_RS05995 PF07963 Prokaryotic N-terminal methylation motif M2905_RS06000 PF00482 Type II secretion system (T2SS), protein F M2905_RS06005 PF00437 Type II/IV secretion system protein M2905_RS06015 PF01709 Transcriptional regulator M2905_RS06020 PF03601 Conserved hypothetical protein 698 M2905_RS06025 PF05991 YacP-like NYN domain M2905_RS06030 PF00588 SpoU rRNA Methylase family M2905_RS06030 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2905_RS06035 PF00636 Ribonuclease III domain M2905_RS06040 PF09190 DALR domain M2905_RS06040 PF01406 tRNA synthetases class I (C) catalytic domain M2905_RS06045 PF06426 Serine acetyltransferase, N-terminal M2905_RS06045 PF00132 Bacterial transferase hexapeptide (six repeats) M2905_RS06050 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2905_RS06060 PF18073 Rubredoxin metal binding domain M2905_RS06065 PF00692 dUTPase M2905_RS06070 PF02583 Metal-sensitive transcriptional repressor M2905_RS06075 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS06075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS06080 PF00581 Rhodanese-like domain M2905_RS06085 PF01479 S4 domain M2905_RS06085 PF00849 RNA pseudouridylate synthase M2905_RS06090 PF01943 Polysaccharide biosynthesis protein M2905_RS06090 PF14667 Polysaccharide biosynthesis C-terminal domain M2905_RS06095 PF05343 M42 glutamyl aminopeptidase M2905_RS06105 PF06335 Protein of unknown function (DUF1054) M2905_RS06110 PF13302 Acetyltransferase (GNAT) domain M2905_RS06120 PF02146 Sir2 family M2905_RS06130 PF01546 Peptidase family M20/M25/M40 M2905_RS06135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS06135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2905_RS06140 PF01336 OB-fold nucleic acid binding domain M2905_RS06140 PF00152 tRNA synthetases class II (D, K and N) M2905_RS06140 PF02938 GAD domain M2905_RS06145 PF13393 Histidyl-tRNA synthetase M2905_RS06145 PF03129 Anticodon binding domain M2905_RS06150 PF01520 N-acetylmuramoyl-L-alanine amidase M2905_RS06150 PF08239 Bacterial SH3 domain M2905_RS06155 PF02580 D-Tyr-tRNA(Tyr) deacylase M2905_RS06160 PF13291 ACT domain M2905_RS06160 PF04607 Region found in RelA / SpoT proteins M2905_RS06160 PF02824 TGS domain M2905_RS06175 PF00005 ABC transporter M2905_RS06185 PF04452 RNA methyltransferase M2905_RS06200 PF16193 AAA C-terminal domain M2905_RS06200 PF12002 MgsA AAA+ ATPase C terminal M2905_RS06200 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2905_RS06215 PF00582 Universal stress protein family M2905_RS06220 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS06220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS06225 PF00149 Calcineurin-like phosphoesterase M2905_RS06225 PF02872 5'-nucleotidase, C-terminal domain M2905_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06240 PF00005 ABC transporter M2905_RS06250 PF03051 Peptidase C1-like family M2905_RS06265 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS06265 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2905_RS06275 PF02535 ZIP Zinc transporter M2905_RS06280 PF09515 Thiamine transporter protein (Thia_YuaJ) M2905_RS06285 PF00893 Small Multidrug Resistance protein M2905_RS06290 PF00893 Small Multidrug Resistance protein M2905_RS06300 PF00480 ROK family M2905_RS06305 PF01238 Phosphomannose isomerase type I M2905_RS06310 PF00480 ROK family M2905_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06355 PF00232 Glycosyl hydrolase family 1 M2905_RS06360 PF00583 Acetyltransferase (GNAT) family M2905_RS06375 PF00963 Cohesin domain M2905_RS06375 PF00041 Fibronectin type III domain M2905_RS06375 PF02838 Glycosyl hydrolase family 20, domain 2 M2905_RS06375 PF07555 beta-N-acetylglucosaminidase M2905_RS06375 PF00754 F5/8 type C domain M2905_RS06380 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M2905_RS06380 PF00703 Glycosyl hydrolases family 2 M2905_RS06380 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M2905_RS06380 PF02837 Glycosyl hydrolases family 2, sugar binding domain M2905_RS06390 PF00005 ABC transporter M2905_RS06390 PF16326 ABC transporter C-terminal domain M2905_RS06390 PF12848 ABC transporter M2905_RS06400 PF07690 Major Facilitator Superfamily M2905_RS06410 PF04002 RadC-like JAB domain M2905_RS06425 PF00817 impB/mucB/samB family M2905_RS06425 PF11799 impB/mucB/samB family C-terminal domain M2905_RS06425 PF11798 IMS family HHH motif M2905_RS06435 PF13538 UvrD-like helicase C-terminal domain M2905_RS06445 PF01268 Formate--tetrahydrofolate ligase M2905_RS06450 PF04892 VanZ like family M2905_RS06455 PF01207 Dihydrouridine synthase (Dus) M2905_RS06460 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family M2905_RS06465 PF07943 Penicillin-binding protein 5, C-terminal domain M2905_RS06465 PF00768 D-alanyl-D-alanine carboxypeptidase M2905_RS06470 PF00271 Helicase conserved C-terminal domain M2905_RS06470 PF00176 SNF2 family N-terminal domain M2905_RS06470 PF04434 SWIM zinc finger M2905_RS06480 PF01301 Glycosyl hydrolases family 35 M2905_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS06500 PF01547 Bacterial extracellular solute-binding protein M2905_RS06505 PF12833 Helix-turn-helix domain M2905_RS06505 PF00072 Response regulator receiver domain M2905_RS06510 PF06580 Histidine kinase M2905_RS06510 PF07694 5TMR of 5TMR-LYT M2905_RS06515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS06515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS06530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS06530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS06545 PF12833 Helix-turn-helix domain M2905_RS06550 PF00367 phosphotransferase system, EIIB M2905_RS06550 PF02378 Phosphotransferase system, EIIC M2905_RS06555 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2905_RS06555 PF02056 Family 4 glycosyl hydrolase M2905_RS06560 PF01380 SIS domain M2905_RS06560 PF01418 Helix-turn-helix domain, rpiR family M2905_RS06570 PF00860 Permease family M2905_RS06605 PF14659 Phage integrase, N-terminal SAM-like domain M2905_RS06605 PF00589 Phage integrase family M2905_RS06610 PF00380 Ribosomal protein S9/S16 M2905_RS06615 PF00572 Ribosomal protein L13 M2905_RS06620 PF01416 tRNA pseudouridine synthase M2905_RS06625 PF02361 Cobalt transport protein M2905_RS06630 PF00005 ABC transporter M2905_RS06635 PF00005 ABC transporter M2905_RS06640 PF01196 Ribosomal protein L17 M2905_RS06645 PF01000 RNA polymerase Rpb3/RpoA insert domain M2905_RS06645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M2905_RS06645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M2905_RS06650 PF00411 Ribosomal protein S11 M2905_RS06655 PF00416 Ribosomal protein S13/S18 M2905_RS06660 PF00444 Ribosomal protein L36 M2905_RS06665 PF01176 Translation initiation factor 1A / IF-1 M2905_RS06670 PF05191 Adenylate kinase, active site lid M2905_RS06675 PF00344 SecY translocase M2905_RS06680 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M2905_RS06685 PF00327 Ribosomal protein L30p/L7e M2905_RS06690 PF03719 Ribosomal protein S5, C-terminal domain M2905_RS06690 PF00333 Ribosomal protein S5, N-terminal domain M2905_RS06695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M2905_RS06700 PF00347 Ribosomal protein L6 M2905_RS06705 PF00410 Ribosomal protein S8 M2905_RS06710 PF00253 Ribosomal protein S14p/S29e M2905_RS06715 PF00673 ribosomal L5P family C-terminus M2905_RS06715 PF00281 Ribosomal protein L5 M2905_RS06720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M2905_RS06720 PF00467 KOW motif M2905_RS06725 PF00238 Ribosomal protein L14p/L23e M2905_RS06730 PF00366 Ribosomal protein S17 M2905_RS06735 PF00831 Ribosomal L29 protein M2905_RS06740 PF00252 Ribosomal protein L16p/L10e M2905_RS06745 PF07650 KH domain M2905_RS06745 PF00189 Ribosomal protein S3, C-terminal domain M2905_RS06750 PF00237 Ribosomal protein L22p/L17e M2905_RS06755 PF00203 Ribosomal protein S19 M2905_RS06760 PF00181 Ribosomal Proteins L2, RNA binding domain M2905_RS06760 PF03947 Ribosomal Proteins L2, C-terminal domain M2905_RS06765 PF00276 Ribosomal protein L23 M2905_RS06770 PF00573 Ribosomal protein L4/L1 family M2905_RS06775 PF00297 Ribosomal protein L3 M2905_RS06780 PF00338 Ribosomal protein S10p/S20e M2905_RS06790 PF00009 Elongation factor Tu GTP binding domain M2905_RS06790 PF03144 Elongation factor Tu domain 2 M2905_RS06790 PF03143 Elongation factor Tu C-terminal domain M2905_RS06795 PF14492 Elongation Factor G, domain II M2905_RS06795 PF00679 Elongation factor G C-terminus M2905_RS06795 PF03764 Elongation factor G, domain IV M2905_RS06795 PF00009 Elongation factor Tu GTP binding domain M2905_RS06795 PF03144 Elongation factor Tu domain 2 M2905_RS06800 PF00177 Ribosomal protein S7p/S5e M2905_RS06805 PF00164 Ribosomal protein S12/S23 M2905_RS06810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M2905_RS06815 PF01048 Phosphorylase superfamily M2905_RS06820 PF01048 Phosphorylase superfamily M2905_RS06825 PF01676 Metalloenzyme superfamily M2905_RS06830 PF02653 Branched-chain amino acid transport system / permease component M2905_RS06835 PF02653 Branched-chain amino acid transport system / permease component M2905_RS06840 PF00005 ABC transporter M2905_RS06845 PF02608 ABC transporter substrate-binding protein PnrA-like M2905_RS06850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2905_RS06855 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M2905_RS06855 PF02885 Glycosyl transferase family, helical bundle domain M2905_RS06855 PF00591 Glycosyl transferase family, a/b domain M2905_RS06860 PF00356 Bacterial regulatory proteins, lacI family M2905_RS06870 PF02653 Branched-chain amino acid transport system / permease component M2905_RS06875 PF09383 NIL domain M2905_RS06875 PF00005 ABC transporter M2905_RS06880 PF03099 Biotin/lipoate A/B protein ligase family M2905_RS06880 PF08279 HTH domain M2905_RS06880 PF02237 Biotin protein ligase C terminal domain M2905_RS06890 PF02424 ApbE family M2905_RS06895 PF04205 FMN-binding domain M2905_RS06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS06910 PF00348 Polyprenyl synthetase M2905_RS06915 PF00005 ABC transporter M2905_RS06915 PF12848 ABC transporter M2905_RS06920 PF00772 DnaB-like helicase N terminal domain M2905_RS06920 PF03796 DnaB-like helicase C terminal domain M2905_RS06925 PF03948 Ribosomal protein L9, C-terminal domain M2905_RS06925 PF01281 Ribosomal protein L9, N-terminal domain M2905_RS06930 PF01084 Ribosomal protein S18 M2905_RS06935 PF00436 Single-strand binding protein family M2905_RS06940 PF01250 Ribosomal protein S6 M2905_RS06950 PF00521 DNA gyrase/topoisomerase IV, subunit A M2905_RS06950 PF03989 DNA gyrase C-terminal domain, beta-propeller M2905_RS06955 PF01751 Toprim domain M2905_RS06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS06955 PF00986 DNA gyrase B subunit, carboxyl terminus M2905_RS06955 PF00204 DNA gyrase B M2905_RS06960 PF02463 RecF/RecN/SMC N terminal domain M2905_RS06985 PF04962 KduI/IolB family M2905_RS06990 PF01614 Bacterial transcriptional regulator M2905_RS06990 PF09339 IclR helix-turn-helix domain M2905_RS06995 PF01081 KDPG and KHG aldolase M2905_RS07000 PF00294 pfkB family carbohydrate kinase M2905_RS07005 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain M2905_RS07005 PF02278 Polysaccharide lyase family 8, super-sandwich domain M2905_RS07005 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M2905_RS07020 PF03613 PTS system mannose/fructose/sorbose family IID component M2905_RS07025 PF03609 PTS system sorbose-specific iic component M2905_RS07035 PF07470 Glycosyl Hydrolase Family 88 M2905_RS07040 PF00392 Bacterial regulatory proteins, gntR family M2905_RS07040 PF07702 UTRA domain M2905_RS07045 PF00712 DNA polymerase III beta subunit, N-terminal domain M2905_RS07045 PF02767 DNA polymerase III beta subunit, central domain M2905_RS07045 PF02768 DNA polymerase III beta subunit, C-terminal domain M2905_RS07050 PF00308 Bacterial dnaA protein M2905_RS07050 PF08299 Bacterial dnaA protein helix-turn-helix M2905_RS07055 PF00468 Ribosomal protein L34 M2905_RS07060 PF00825 Ribonuclease P M2905_RS07065 PF02096 60Kd inner membrane protein M2905_RS07075 PF01926 50S ribosome-binding GTPase M2905_RS07075 PF12631 MnmE helical domain M2905_RS07075 PF10396 GTP-binding protein TrmE N-terminus M2905_RS07080 PF13932 GidA associated domain M2905_RS07080 PF01134 Glucose inhibited division protein A M2905_RS07105 PF02527 rRNA small subunit methyltransferase G M2905_RS07110 PF13614 AAA domain M2905_RS07115 PF17762 HTH domain found in ParB protein M2905_RS07115 PF02195 ParB-like nuclease domain M2905_RS07120 PF06107 Bacterial protein of unknown function (DUF951) M2905_RS07125 PF06071 Protein of unknown function (DUF933) M2905_RS07125 PF01926 50S ribosome-binding GTPase M2905_RS07135 PF00478 IMP dehydrogenase / GMP reductase domain M2905_RS07135 PF00571 CBS domain M2905_RS07140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2905_RS07140 PF02403 Seryl-tRNA synthetase N-terminal domain M2905_RS07145 PF07943 Penicillin-binding protein 5, C-terminal domain M2905_RS07145 PF00768 D-alanyl-D-alanine carboxypeptidase M2905_RS07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS07150 PF00512 His Kinase A (phospho-acceptor) domain M2905_RS07155 PF00486 Transcriptional regulatory protein, C terminal M2905_RS07155 PF00072 Response regulator receiver domain M2905_RS07160 PF00300 Histidine phosphatase superfamily (branch 1) M2905_RS07220 PF17727 CtsR C-terminal dimerization domain M2905_RS07220 PF05848 CtsR N-terminal HTH domain M2905_RS07225 PF02861 Clp amino terminal domain, pathogenicity island component M2905_RS07225 PF10431 C-terminal, D2-small domain, of ClpB protein M2905_RS07225 PF17871 AAA lid domain M2905_RS07225 PF07724 AAA domain (Cdc48 subfamily) M2905_RS07225 PF00004 ATPase family associated with various cellular activities (AAA) M2905_RS07235 PF16325 Peptidase family U32 C-terminal domain M2905_RS07235 PF01136 Peptidase family U32 M2905_RS07245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS07245 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS07250 PF01654 Cytochrome bd terminal oxidase subunit I M2905_RS07255 PF02322 Cytochrome bd terminal oxidase subunit II M2905_RS07260 PF00005 ABC transporter M2905_RS07260 PF00664 ABC transporter transmembrane region M2905_RS07265 PF00664 ABC transporter transmembrane region M2905_RS07265 PF00005 ABC transporter M2905_RS07275 PF00348 Polyprenyl synthetase M2905_RS07295 PF01515 Phosphate acetyl/butaryl transferase M2905_RS07300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M2905_RS07305 PF17936 Bacterial Ig domain M2905_RS07305 PF00149 Calcineurin-like phosphoesterase M2905_RS07305 PF02872 5'-nucleotidase, C-terminal domain M2905_RS07315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2905_RS07315 PF14579 Helix-hairpin-helix motif M2905_RS07315 PF02811 PHP domain M2905_RS07315 PF00929 Exonuclease M2905_RS07315 PF14480 DNA polymerase III polC-type N-terminus I M2905_RS07315 PF11490 DNA polymerase III polC-type N-terminus II M2905_RS07315 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2905_RS07320 PF03372 Endonuclease/Exonuclease/phosphatase family M2905_RS07325 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M2905_RS07325 PF01565 FAD binding domain M2905_RS07330 PF08240 Alcohol dehydrogenase GroES-like domain M2905_RS07330 PF00107 Zinc-binding dehydrogenase M2905_RS07340 PF08402 TOBE domain M2905_RS07340 PF00005 ABC transporter M2905_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS07350 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS07355 PF13416 Bacterial extracellular solute-binding protein M2905_RS07360 PF08544 GHMP kinases C terminal M2905_RS07360 PF00288 GHMP kinases N terminal domain M2905_RS07365 PF02378 Phosphotransferase system, EIIC M2905_RS07365 PF00367 phosphotransferase system, EIIB M2905_RS07365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS07370 PF01297 Zinc-uptake complex component A periplasmic M2905_RS07375 PF00950 ABC 3 transport family M2905_RS07380 PF00005 ABC transporter M2905_RS07385 PF00005 ABC transporter M2905_RS07390 PF00950 ABC 3 transport family M2905_RS07395 PF09182 Bacterial purine repressor, N-terminal M2905_RS07395 PF00156 Phosphoribosyl transferase domain M2905_RS07400 PF00132 Bacterial transferase hexapeptide (six repeats) M2905_RS07400 PF00483 Nucleotidyl transferase M2905_RS07405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M2905_RS07405 PF14572 Phosphoribosyl synthetase-associated domain M2905_RS07410 PF01741 Large-conductance mechanosensitive channel, MscL M2905_RS07415 PF05193 Peptidase M16 inactive domain M2905_RS07420 PF00675 Insulinase (Peptidase family M16) M2905_RS07420 PF05193 Peptidase M16 inactive domain M2905_RS07430 PF13464 Domain of unknown function (DUF4115) M2905_RS07435 PF01066 CDP-alcohol phosphatidyltransferase M2905_RS07440 PF02464 Competence-damaged protein M2905_RS07440 PF18146 Damage-inducible protein CinA KH domain M2905_RS07440 PF00994 Probable molybdopterin binding domain M2905_RS07445 PF00154 recA bacterial DNA recombination protein M2905_RS07450 PF01966 HD domain M2905_RS07450 PF12072 Domain of unknown function (DUF3552) M2905_RS07450 PF00013 KH domain M2905_RS07465 PF00313 'Cold-shock' DNA-binding domain M2905_RS07480 PF13580 SIS domain M2905_RS07485 PF00367 phosphotransferase system, EIIB M2905_RS07485 PF02378 Phosphotransferase system, EIIC M2905_RS07490 PF13419 Haloacid dehalogenase-like hydrolase M2905_RS07495 PF01418 Helix-turn-helix domain, rpiR family M2905_RS07495 PF01380 SIS domain M2905_RS07500 PF13538 UvrD-like helicase C-terminal domain M2905_RS07505 PF00486 Transcriptional regulatory protein, C terminal M2905_RS07505 PF00072 Response regulator receiver domain M2905_RS07510 PF00672 HAMP domain M2905_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS07510 PF00512 His Kinase A (phospho-acceptor) domain M2905_RS07510 PF13426 PAS domain M2905_RS07525 PF00753 Metallo-beta-lactamase superfamily M2905_RS07530 PF13180 PDZ domain M2905_RS07535 PF02590 Predicted SPOUT methyltransferase M2905_RS07555 PF02798 Glutathione S-transferase, N-terminal domain M2905_RS07560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2905_RS07565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS07565 PF00367 phosphotransferase system, EIIB M2905_RS07565 PF02378 Phosphotransferase system, EIIC M2905_RS07570 PF03123 CAT RNA binding domain M2905_RS07570 PF00874 PRD domain M2905_RS07575 PF00232 Glycosyl hydrolase family 1 M2905_RS07585 PF02308 MgtC family M2905_RS07590 PF07690 Major Facilitator Superfamily M2905_RS07595 PF00158 Sigma-54 interaction domain M2905_RS07595 PF00874 PRD domain M2905_RS07595 PF03610 PTS system fructose IIA component M2905_RS07600 PF03830 PTS system sorbose subfamily IIB component M2905_RS07600 PF03610 PTS system fructose IIA component M2905_RS07605 PF03610 PTS system fructose IIA component M2905_RS07605 PF03830 PTS system sorbose subfamily IIB component M2905_RS07610 PF03609 PTS system sorbose-specific iic component M2905_RS07615 PF03613 PTS system mannose/fructose/sorbose family IID component M2905_RS07650 PF00005 ABC transporter M2905_RS07650 PF12558 ATP-binding cassette cobalt transporter M2905_RS07665 PF00535 Glycosyl transferase family 2 M2905_RS07675 PF00860 Permease family M2905_RS07680 PF01979 Amidohydrolase family M2905_RS07685 PF00535 Glycosyl transferase family 2 M2905_RS07690 PF00005 ABC transporter M2905_RS07695 PF03649 Uncharacterised protein family (UPF0014) M2905_RS07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2905_RS07705 PF03466 LysR substrate binding domain M2905_RS07710 PF00923 Transaldolase/Fructose-6-phosphate aldolase M2905_RS07720 PF10396 GTP-binding protein TrmE N-terminus M2905_RS07720 PF01926 50S ribosome-binding GTPase M2905_RS07720 PF12631 MnmE helical domain M2905_RS07730 PF13460 NAD(P)H-binding M2905_RS07735 PF01638 HxlR-like helix-turn-helix M2905_RS07740 PF00156 Phosphoribosyl transferase domain M2905_RS07745 PF00860 Permease family M2905_RS07750 PF02378 Phosphotransferase system, EIIC M2905_RS07750 PF00367 phosphotransferase system, EIIB M2905_RS07750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2905_RS07755 PF01613 Flavin reductase like domain M2905_RS07760 PF13407 Periplasmic binding protein domain M2905_RS07760 PF00356 Bacterial regulatory proteins, lacI family M2905_RS07765 PF00367 phosphotransferase system, EIIB M2905_RS07765 PF02378 Phosphotransferase system, EIIC M2905_RS07770 PF08244 Glycosyl hydrolases family 32 C terminal M2905_RS07770 PF00251 Glycosyl hydrolases family 32 N-terminal domain M2905_RS07780 PF00924 Mechanosensitive ion channel M2905_RS07810 PF00155 Aminotransferase class I and II M2905_RS07815 PF01370 NAD dependent epimerase/dehydratase family M2905_RS07825 PF00465 Iron-containing alcohol dehydrogenase M2905_RS07830 PF07748 Glycosyl hydrolases family 38 C-terminal domain M2905_RS07830 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 M2905_RS07830 PF01074 Glycosyl hydrolases family 38 N-terminal domain M2905_RS07830 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain M2905_RS07830 PF09261 Alpha mannosidase middle domain M2905_RS07840 PF00392 Bacterial regulatory proteins, gntR family M2905_RS07860 PF00581 Rhodanese-like domain M2905_RS07860 PF12368 Rhodanase C-terminal M2905_RS07860 PF17773 UPF0176 acylphosphatase like domain M2905_RS07865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2905_RS07865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2905_RS07870 PF02245 Methylpurine-DNA glycosylase (MPG) M2905_RS07880 PF01978 Sugar-specific transcriptional regulator TrmB M2905_RS07880 PF11495 Archaeal transcriptional regulator TrmB M2905_RS07890 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2905_RS07895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2905_RS07895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2905_RS07900 PF00294 pfkB family carbohydrate kinase M2905_RS07905 PF08220 DeoR-like helix-turn-helix domain M2905_RS07905 PF00455 DeoR C terminal sensor domain M2905_RS07910 PF13277 YmdB-like protein M2905_RS07920 PF05190 MutS family domain IV M2905_RS07920 PF05192 MutS domain III M2905_RS07920 PF05188 MutS domain II M2905_RS07920 PF01624 MutS domain I M2905_RS07920 PF00488 MutS domain V M2905_RS07925 PF08676 MutL C terminal dimerisation domain M2905_RS07925 PF01119 DNA mismatch repair protein, C-terminal domain M2905_RS07930 PF02545 Maf-like protein M2905_RS07935 PF01641 SelR domain M2905_RS07940 PF01380 SIS domain M2905_RS07940 PF01418 Helix-turn-helix domain, rpiR family M2905_RS07945 PF08903 Domain of unknown function (DUF1846) M2905_RS07950 PF01966 HD domain M2905_RS07960 PF03788 LrgA family M2905_RS07965 PF04172 LrgB-like family M2905_RS07970 PF00571 CBS domain M2905_RS07970 PF08279 HTH domain M2905_RS07975 PF03618 Kinase/pyrophosphorylase M2905_RS07980 PF00781 Diacylglycerol kinase catalytic domain M2905_RS08000 PF00072 Response regulator receiver domain M2905_RS08000 PF00486 Transcriptional regulatory protein, C terminal M2905_RS08005 PF00672 HAMP domain M2905_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2905_RS08005 PF00512 His Kinase A (phospho-acceptor) domain M2905_RS08010 PF05256 Uncharacterised protein family (UPF0223) M2905_RS08015 PF00459 Inositol monophosphatase family M2905_RS08020 PF00679 Elongation factor G C-terminus M2905_RS08020 PF14492 Elongation Factor G, domain II M2905_RS08020 PF00009 Elongation factor Tu GTP binding domain M2905_RS08020 PF03144 Elongation factor Tu domain 2 M2905_RS08030 PF02558 Ketopantoate reductase PanE/ApbA M2905_RS08030 PF08546 Ketopantoate reductase PanE/ApbA C terminal M2905_RS08040 PF00171 Aldehyde dehydrogenase family M2905_RS08045 PF01116 Fructose-bisphosphate aldolase class-II M2905_RS08060 PF10282 Lactonase, 7-bladed beta-propeller M2905_RS08070 PF01594 AI-2E family transporter M2905_RS08075 PF02525 Flavodoxin-like fold M2905_RS08090 PF07694 5TMR of 5TMR-LYT M2905_RS08090 PF00990 Diguanylate cyclase, GGDEF domain M2905_RS08100 PF03831 PhnA domain M2905_RS08100 PF08274 PhnA Zinc-Ribbon M2905_RS08105 PF04298 Putative neutral zinc metallopeptidase M2905_RS08115 PF13556 PucR C-terminal helix-turn-helix domain M2905_RS08120 PF14437 MafB19-like deaminase M2905_RS08145 PF12169 DNA polymerase III subunits gamma and tau domain III M2905_RS08150 PF02575 YbaB/EbfC DNA-binding family M2905_RS08155 PF13662 Toprim domain M2905_RS08155 PF02132 RecR protein M2905_RS08160 PF02223 Thymidylate kinase M2905_RS08165 PF06153 Cyclic-di-AMP receptor M2905_RS08170 PF09115 DNA polymerase III, delta subunit, C terminal M2905_RS08175 PF04468 PSP1 C-terminal conserved region M2905_RS08180 PF06156 Initiation control protein YabA M2905_RS08185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2905_RS08220 PF00005 ABC transporter M2905_RS08220 PF00664 ABC transporter transmembrane region M2905_RS08225 PF00005 ABC transporter M2905_RS08225 PF00664 ABC transporter transmembrane region M2905_RS08230 PF04260 Protein of unknown function (DUF436) M2905_RS08235 PF01386 Ribosomal L25p family M2905_RS08235 PF14693 Ribosomal protein TL5, C-terminal domain M2905_RS08240 PF00005 ABC transporter M2905_RS08245 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS08255 PF13514 AAA domain M2905_RS08265 PF01479 S4 domain M2905_RS08265 PF00163 Ribosomal protein S4/S9 N-terminal domain M2905_RS08270 PF07664 Ferrous iron transport protein B C terminus M2905_RS08270 PF07670 Nucleoside recognition M2905_RS08270 PF17910 FeoB cytosolic helical domain M2905_RS08270 PF02421 Ferrous iron transport protein B M2905_RS08280 PF10531 SLBB domain M2905_RS08285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2905_RS08290 PF00753 Metallo-beta-lactamase superfamily M2905_RS08290 PF03772 Competence protein M2905_RS08290 PF13567 Domain of unknown function (DUF4131) M2905_RS08295 PF06144 DNA polymerase III, delta subunit M2905_RS08300 PF01649 Ribosomal protein S20 M2905_RS08305 PF01384 Phosphate transporter family M2905_RS08310 PF01865 Protein of unknown function DUF47 M2905_RS08325 PF02673 Bacitracin resistance protein BacA M2905_RS08330 PF12833 Helix-turn-helix domain M2905_RS08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS08345 PF01261 Xylose isomerase-like TIM barrel M2905_RS08350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS08350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS08355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M2905_RS08355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M2905_RS08360 PF18357 Diphteria toxin repressor SH3 domain M2905_RS08360 PF02742 Iron dependent repressor, metal binding and dimerisation domain M2905_RS08360 PF01325 Iron dependent repressor, N-terminal DNA binding domain M2905_RS08375 PF00571 CBS domain M2905_RS08375 PF00005 ABC transporter M2905_RS08380 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS08385 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2905_RS08390 PF00528 Binding-protein-dependent transport system inner membrane component M2905_RS08395 PF00155 Aminotransferase class I and II M2905_RS08400 PF01066 CDP-alcohol phosphatidyltransferase M2905_RS08410 PF01979 Amidohydrolase family M2905_RS08415 PF12464 Maltose acetyltransferase M2905_RS08415 PF00132 Bacterial transferase hexapeptide (six repeats) M2905_RS08430 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2905_RS08430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2905_RS08435 PF01380 SIS domain M2905_RS08435 PF01418 Helix-turn-helix domain, rpiR family M2905_RS08440 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M2905_RS08440 PF02896 PEP-utilising enzyme, TIM barrel domain M2905_RS08440 PF00391 PEP-utilising enzyme, mobile domain M2905_RS08445 PF03009 Glycerophosphoryl diester phosphodiesterase family M2905_RS08450 PF01588 Putative tRNA binding domain M2905_RS08450 PF08264 Anticodon-binding domain of tRNA M2905_RS08450 PF09334 tRNA synthetases class I (M) M2905_RS08455 PF01026 TatD related DNase M2905_RS08460 PF01751 Toprim domain M2905_RS08460 PF13331 Domain of unknown function (DUF4093) M2905_RS08465 PF00398 Ribosomal RNA adenine dimethylase M2905_RS08470 PF17912 MalK OB fold domain M2905_RS08470 PF00005 ABC transporter M2905_RS08470 PF03459 TOBE domain M2905_RS08475 PF02142 MGS-like domain M2905_RS08480 PF12822 ECF transporter, substrate-specific component M2905_RS08485 PF02384 N-6 DNA Methylase M2905_RS08490 PF00871 Acetokinase family M2905_RS08495 PF01032 FecCD transport family M2905_RS08500 PF01032 FecCD transport family M2905_RS08505 PF00005 ABC transporter M2905_RS08510 PF01497 Periplasmic binding protein M2905_RS08525 PF14552 Tautomerase enzyme M2905_RS08530 PF00455 DeoR C terminal sensor domain M2905_RS08530 PF08220 DeoR-like helix-turn-helix domain M2905_RS08535 PF00171 Aldehyde dehydrogenase family M2905_RS08540 PF04962 KduI/IolB family M2905_RS08545 PF00294 pfkB family carbohydrate kinase M2905_RS08550 PF00205 Thiamine pyrophosphate enzyme, central domain M2905_RS08550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2905_RS08550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2905_RS08555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS08555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS08560 PF01261 Xylose isomerase-like TIM barrel M2905_RS08565 PF00474 Sodium:solute symporter family M2905_RS08570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2905_RS08570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2905_RS08580 PF01330 RuvA N terminal domain M2905_RS08580 PF07499 RuvA, C-terminal domain M2905_RS08585 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2905_RS08585 PF05491 RuvB C-terminal winged helix domain M2905_RS08585 PF17864 RuvB AAA lid domain M2905_RS08590 PF02547 Queuosine biosynthesis protein M2905_RS08595 PF01702 Queuine tRNA-ribosyltransferase M2905_RS08600 PF02699 Preprotein translocase subunit M2905_RS08610 PF00171 Aldehyde dehydrogenase family M2905_RS08610 PF00465 Iron-containing alcohol dehydrogenase M2905_RS08625 PF00877 NlpC/P60 family M2905_RS08630 PF13520 Amino acid permease M2905_RS08635 PF08439 Oligopeptidase F M2905_RS08635 PF01432 Peptidase family M3 M2905_RS08645 PF06257 Biofilm formation stimulator VEG M2905_RS08650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2905_RS08650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2905_RS08655 PF00392 Bacterial regulatory proteins, gntR family M2905_RS08655 PF07702 UTRA domain M2905_RS08660 PF01546 Peptidase family M20/M25/M40 M2905_RS08665 PF01112 Asparaginase M2905_RS08675 PF00480 ROK family M2905_RS08695 PF13610 DDE domain M2905_RS08705 PF05958 tRNA (Uracil-5-)-methyltransferase M2905_RS08705 PF01938 TRAM domain M2905_RS08710 PF00156 Phosphoribosyl transferase domain M2905_RS08720 PF01061 ABC-2 type transporter M2905_RS08725 PF02082 Transcriptional regulator M2905_RS08730 PF00392 Bacterial regulatory proteins, gntR family M2905_RS08730 PF07702 UTRA domain M2905_RS08735 PF00128 Alpha amylase, catalytic domain M2905_RS08735 PF16657 Maltogenic Amylase, C-terminal domain M2905_RS08740 PF00367 phosphotransferase system, EIIB M2905_RS08740 PF02378 Phosphotransferase system, EIIC M2905_RS08750 PF00005 ABC transporter M2905_RS08765 PF13411 MerR HTH family regulatory protein M2905_RS08770 PF00300 Histidine phosphatase superfamily (branch 1) M2905_RS08775 PF00392 Bacterial regulatory proteins, gntR family M2905_RS08775 PF07702 UTRA domain M2905_RS08780 PF00232 Glycosyl hydrolase family 1 M2905_RS08785 PF01551 Peptidase family M23 M2905_RS08785 PF10145 Phage-related minor tail protein M2905_RS08785 PF01464 Transglycosylase SLT domain M2905_RS08790 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain M2905_RS08790 PF01522 Polysaccharide deacetylase M2905_RS08795 PF00253 Ribosomal protein S14p/S29e M2905_RS08810 PF02954 Bacterial regulatory protein, Fis family M2905_RS08810 PF00158 Sigma-54 interaction domain M2905_RS08810 PF01590 GAF domain M2905_RS08815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2905_RS08815 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2905_RS08820 PF00676 Dehydrogenase E1 component M2905_RS08825 PF02779 Transketolase, pyrimidine binding domain M2905_RS08825 PF02780 Transketolase, C-terminal domain M2905_RS08830 PF02817 e3 binding domain M2905_RS08830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2905_RS08830 PF00364 Biotin-requiring enzyme M2905_RS08835 PF02540 NAD synthase M2905_RS08835 PF00117 Glutamine amidotransferase class-I M2905_RS08835 PF00958 GMP synthase C terminal domain M2905_RS08840 PF00485 Phosphoribulokinase / Uridine kinase family M2905_RS08845 PF03061 Thioesterase superfamily M2905_RS08855 PF05175 Methyltransferase small domain M2905_RS08860 PF00318 Ribosomal protein S2 M2905_RS08865 PF00889 Elongation factor TS M2905_RS08870 PF00696 Amino acid kinase family M2905_RS08875 PF01765 Ribosome recycling factor M2905_RS08880 PF00654 Voltage gated chloride channel M2905_RS08885 PF01255 Putative undecaprenyl diphosphate synthase M2905_RS08895 PF02163 Peptidase family M50 M2905_RS08895 PF17820 PDZ domain M2905_RS08900 PF03129 Anticodon binding domain M2905_RS08900 PF04073 Aminoacyl-tRNA editing domain M2905_RS08900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2905_RS08905 PF14480 DNA polymerase III polC-type N-terminus I M2905_RS08905 PF11490 DNA polymerase III polC-type N-terminus II M2905_RS08905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2905_RS08905 PF02811 PHP domain M2905_RS08905 PF00929 Exonuclease M2905_RS08905 PF14579 Helix-hairpin-helix motif M2905_RS08905 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2905_RS08910 PF01475 Ferric uptake regulator family M2905_RS08990 PF01541 GIY-YIG catalytic domain M2905_RS08990 PF02151 UvrB/uvrC motif M2905_RS08990 PF08459 UvrC Helix-hairpin-helix N-terminal M2905_RS09000 PF00005 ABC transporter M2905_RS09000 PF13732 Domain of unknown function (DUF4162) M2905_RS09010 PF00580 UvrD/REP helicase N-terminal domain M2905_RS09010 PF13361 UvrD-like helicase C-terminal domain M2905_RS09015 PF03120 NAD-dependent DNA ligase OB-fold domain M2905_RS09015 PF12826 Helix-hairpin-helix motif M2905_RS09015 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M2905_RS09015 PF00533 BRCA1 C Terminus (BRCT) domain M2905_RS09015 PF01653 NAD-dependent DNA ligase adenylation domain M2905_RS09020 PF02686 Glu-tRNAGln amidotransferase C subunit M2905_RS09025 PF01425 Amidase M2905_RS09030 PF02934 GatB/GatE catalytic domain M2905_RS09030 PF02637 GatB domain M2905_RS09035 PF00781 Diacylglycerol kinase catalytic domain M2905_RS09040 PF05958 tRNA (Uracil-5-)-methyltransferase M2905_RS09040 PF01938 TRAM domain M2905_RS09060 PF12848 ABC transporter M2905_RS09060 PF00005 ABC transporter M2905_RS09080 PF08241 Methyltransferase domain M2905_RS09085 PF04439 Streptomycin adenylyltransferase M2905_RS09090 PF00156 Phosphoribosyl transferase domain M2905_RS09095 PF13427 Domain of unknown function (DUF4111) M2905_RS09095 PF01909 Nucleotidyltransferase domain M2905_RS09110 PF00027 Cyclic nucleotide-binding domain M2905_RS09110 PF13545 Crp-like helix-turn-helix domain M2905_RS09115 PF04405 Domain of Unknown function (DUF542) M2905_RS09115 PF01814 Hemerythrin HHE cation binding domain M2905_RS09120 PF00403 Heavy-metal-associated domain M2905_RS09125 PF00403 Heavy-metal-associated domain M2905_RS09130 PF05525 Branched-chain amino acid transport protein M2905_RS09140 PF00664 ABC transporter transmembrane region M2905_RS09140 PF00005 ABC transporter M2905_RS09145 PF00664 ABC transporter transmembrane region M2905_RS09145 PF00005 ABC transporter M2905_RS09155 PF07943 Penicillin-binding protein 5, C-terminal domain M2905_RS09155 PF00768 D-alanyl-D-alanine carboxypeptidase M2905_RS09160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2905_RS09165 PF07497 Rho termination factor, RNA-binding domain M2905_RS09165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2905_RS09165 PF07498 Rho termination factor, N-terminal domain M2905_RS09170 PF01197 Ribosomal protein L31 M2905_RS09175 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2905_RS09175 PF01476 LysM domain M2905_RS09180 PF01263 Aldose 1-epimerase M2905_RS09185 PF06874 Firmicute fructose-1,6-bisphosphatase M2905_RS09195 PF00582 Universal stress protein family M2905_RS09210 PF00829 Ribosomal prokaryotic L21 protein M2905_RS09220 PF01016 Ribosomal L27 protein M2905_RS09225 PF01321 Creatinase/Prolidase N-terminal domain M2905_RS09225 PF00557 Metallopeptidase family M24 M2905_RS09230 PF01132 Elongation factor P (EF-P) OB domain M2905_RS09230 PF08207 Elongation factor P (EF-P) KOW-like domain M2905_RS09230 PF09285 Elongation factor P, C-terminal M2905_RS09235 PF03780 Asp23 family, cell envelope-related function M2905_RS09240 PF01029 NusB family M2905_RS09245 PF13742 OB-fold nucleic acid binding domain M2905_RS09245 PF02601 Exonuclease VII, large subunit M2905_RS09250 PF02609 Exonuclease VII small subunit M2905_RS09255 PF00348 Polyprenyl synthetase M2905_RS09260 PF01728 FtsJ-like methyltransferase M2905_RS09260 PF01479 S4 domain M2905_RS09265 PF01316 Arginine repressor, DNA binding domain M2905_RS09265 PF02863 Arginine repressor, C-terminal domain M2905_RS09270 PF02463 RecF/RecN/SMC N terminal domain M2905_RS09285 PF02381 MraZ protein, putative antitoxin-like M2905_RS09290 PF01795 MraW methylase family M2905_RS09300 PF00905 Penicillin binding protein transpeptidase domain M2905_RS09300 PF03717 Penicillin-binding Protein dimerisation domain M2905_RS09300 PF03793 PASTA domain M2905_RS09305 PF00953 Glycosyl transferase family 4 M2905_RS09305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M2905_RS09310 PF02875 Mur ligase family, glutamate ligase domain M2905_RS09310 PF08245 Mur ligase middle domain M2905_RS09315 PF04101 Glycosyltransferase family 28 C-terminal domain M2905_RS09315 PF03033 Glycosyltransferase family 28 N-terminal domain M2905_RS09320 PF08478 POTRA domain, FtsQ-type M2905_RS09320 PF03799 Cell division protein FtsQ M2905_RS09325 PF11983 Membrane-attachment and polymerisation-promoting switch M2905_RS09325 PF02491 SHS2 domain inserted in FTSA M2905_RS09330 PF12327 FtsZ family, C-terminal domain M2905_RS09330 PF00091 Tubulin/FtsZ family, GTPase domain M2905_RS09335 PF01168 Alanine racemase, N-terminal domain M2905_RS09340 PF04472 Cell division protein SepF M2905_RS09350 PF01479 S4 domain M2905_RS09350 PF17774 Putative RNA-binding domain in YlmH M2905_RS09355 PF05103 DivIVA protein M2905_RS09360 PF08264 Anticodon-binding domain of tRNA M2905_RS09360 PF00133 tRNA synthetases class I (I, L, M and V) M2905_RS09360 PF06827 Zinc finger found in FPG and IleRS M2905_RS09385 PF00271 Helicase conserved C-terminal domain M2905_RS09385 PF18019 HD domain M2905_RS09385 PF00270 DEAD/DEAH box helicase M2905_RS09395 PF00471 Ribosomal protein L33 M2905_RS09405 PF00467 KOW motif M2905_RS09405 PF02357 Transcription termination factor nusG M2905_RS09410 PF06865 Pyrimidine/purine nucleoside phosphorylase M2905_RS09415 PF03807 NADP oxidoreductase coenzyme F420-dependent M2905_RS09415 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2905_RS09420 PF04055 Radical SAM superfamily M2905_RS09430 PF02901 Pyruvate formate lyase-like M2905_RS09430 PF01228 Glycine radical M2905_RS09440 PF03313 Serine dehydratase alpha chain M2905_RS09445 PF01842 ACT domain M2905_RS09445 PF03315 Serine dehydratase beta chain M2905_RS09450 PF00298 Ribosomal protein L11, RNA binding domain M2905_RS09450 PF03946 Ribosomal protein L11, N-terminal domain M2905_RS09455 PF00687 Ribosomal protein L1p/L10e family M2905_RS09460 PF00466 Ribosomal protein L10 M2905_RS09465 PF16320 Ribosomal protein L7/L12 dimerisation domain M2905_RS09465 PF00542 Ribosomal protein L7/L12 C-terminal domain M2905_RS09475 PF00438 S-adenosylmethionine synthetase, N-terminal domain M2905_RS09475 PF02772 S-adenosylmethionine synthetase, central domain M2905_RS09475 PF02773 S-adenosylmethionine synthetase, C-terminal domain M2905_RS09480 PF07690 Major Facilitator Superfamily M2905_RS09485 PF06962 Putative rRNA methylase M2905_RS09490 PF04055 Radical SAM superfamily M2905_RS09490 PF16199 Radical_SAM C-terminal domain M2905_RS09495 PF01569 PAP2 superfamily M2905_RS09520 PF01476 LysM domain M2905_RS09520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2905_RS09525 PF08264 Anticodon-binding domain of tRNA M2905_RS09525 PF00133 tRNA synthetases class I (I, L, M and V) M2905_RS09525 PF13603 Leucyl-tRNA synthetase, Domain 2 M2905_RS09525 PF09334 tRNA synthetases class I (M) M2905_RS09530 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M2905_RS09535 PF01451 Low molecular weight phosphotyrosine protein phosphatase M2905_RS09540 PF04203 Sortase domain M2905_RS09550 PF01820 D-ala D-ala ligase N-terminus M2905_RS09550 PF07478 D-ala D-ala ligase C-terminus M2905_RS09555 PF01225 Mur ligase family, catalytic domain M2905_RS09555 PF02875 Mur ligase family, glutamate ligase domain M2905_RS09555 PF08245 Mur ligase middle domain M2905_RS09560 PF00270 DEAD/DEAH box helicase M2905_RS09560 PF00271 Helicase conserved C-terminal domain M2905_RS09600 PF00239 Resolvase, N terminal domain M2905_RS09600 PF02796 Helix-turn-helix domain of resolvase M2905_RS09605 PF01420 Type I restriction modification DNA specificity domain M2905_RS09610 PF13610 DDE domain