locus-tag class description M2908_RS00010 PF06081 Aromatic acid exporter family member 1 M2908_RS00010 PF11728 Putative aromatic acid exporter C-terminal domain M2908_RS00020 PF02557 D-alanyl-D-alanine carboxypeptidase M2908_RS00025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2908_RS00025 PF13457 GW (Gly-Tryp) dipeptide domain M2908_RS00030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2908_RS00030 PF02222 ATP-grasp domain M2908_RS00030 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M2908_RS00040 PF00248 Aldo/keto reductase family M2908_RS00045 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family M2908_RS00050 PF02386 Cation transport protein M2908_RS00055 PF00690 Cation transporter/ATPase, N-terminus M2908_RS00055 PF00689 Cation transporting ATPase, C-terminus M2908_RS00060 PF00676 Dehydrogenase E1 component M2908_RS00065 PF02779 Transketolase, pyrimidine binding domain M2908_RS00065 PF02780 Transketolase, C-terminal domain M2908_RS00070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2908_RS00070 PF00364 Biotin-requiring enzyme M2908_RS00070 PF02817 e3 binding domain M2908_RS00075 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS00075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS00085 PF16921 Tex protein YqgF-like domain M2908_RS00085 PF09371 Tex-like protein N-terminal domain M2908_RS00085 PF17674 HHH domain M2908_RS00085 PF00575 S1 RNA binding domain M2908_RS00090 PF10263 SprT-like family M2908_RS00095 PF02457 DisA bacterial checkpoint controller nucleotide-binding M2908_RS00105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2908_RS00105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2908_RS00105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2908_RS00105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2908_RS00110 PF01411 tRNA synthetases class II (A) M2908_RS00110 PF02272 DHHA1 domain M2908_RS00110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2908_RS00125 PF08245 Mur ligase middle domain M2908_RS00125 PF01225 Mur ligase family, catalytic domain M2908_RS00125 PF02875 Mur ligase family, glutamate ligase domain M2908_RS00130 PF01027 Inhibitor of apoptosis-promoting Bax1 M2908_RS00135 PF01367 5'-3' exonuclease, C-terminal SAM fold M2908_RS00135 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M2908_RS00135 PF00476 DNA polymerase family A M2908_RS00140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M2908_RS00140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M2908_RS00140 PF06827 Zinc finger found in FPG and IleRS M2908_RS00145 PF01121 Dephospho-CoA kinase M2908_RS00150 PF03477 ATP cone domain M2908_RS00160 PF07319 Primosomal protein DnaI N-terminus M2908_RS00160 PF01695 IstB-like ATP binding protein M2908_RS00170 PF01783 Ribosomal L32p protein family M2908_RS00175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2908_RS00175 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2908_RS00180 PF00486 Transcriptional regulatory protein, C terminal M2908_RS00180 PF00072 Response regulator receiver domain M2908_RS00185 PF18719 ArlS sensor domain M2908_RS00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS00185 PF00512 His Kinase A (phospho-acceptor) domain M2908_RS00195 PF02096 60Kd inner membrane protein M2908_RS00200 PF00708 Acylphosphatase M2908_RS00205 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2908_RS00205 PF00588 SpoU rRNA Methylase family M2908_RS00215 PF01638 HxlR-like helix-turn-helix M2908_RS00220 PF01409 tRNA synthetases class II core domain (F) M2908_RS00220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M2908_RS00225 PF03483 B3/4 domain M2908_RS00225 PF03484 tRNA synthetase B5 domain M2908_RS00225 PF03147 Ferredoxin-fold anticodon binding domain M2908_RS00225 PF01588 Putative tRNA binding domain M2908_RS00225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M2908_RS00230 PF01177 Asp/Glu/Hydantoin racemase M2908_RS00235 PF03725 3' exoribonuclease family, domain 2 M2908_RS00235 PF01138 3' exoribonuclease family, domain 1 M2908_RS00240 PF12850 Calcineurin-like phosphoesterase superfamily domain M2908_RS00250 PF01546 Peptidase family M20/M25/M40 M2908_RS00250 PF07687 Peptidase dimerisation domain M2908_RS00255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2908_RS00260 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS00265 PF12911 N-terminal TM domain of oligopeptide transport permease C M2908_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS00270 PF00005 ABC transporter M2908_RS00270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS00275 PF00005 ABC transporter M2908_RS00275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS00285 PF03466 LysR substrate binding domain M2908_RS00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2908_RS00290 PF00698 Acyl transferase domain M2908_RS00295 PF16957 Malonate decarboxylase, alpha subunit, transporter M2908_RS00300 PF06857 Malonate decarboxylase delta subunit (MdcD) M2908_RS00305 PF01039 Carboxyl transferase domain M2908_RS00310 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG M2908_RS00315 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase M2908_RS00320 PF00860 Permease family M2908_RS00325 PF05343 M42 glutamyl aminopeptidase M2908_RS00330 PF00924 Mechanosensitive ion channel M2908_RS00345 PF08669 Glycine cleavage T-protein C-terminal barrel domain M2908_RS00345 PF01571 Aminomethyltransferase folate-binding domain M2908_RS00350 PF01597 Glycine cleavage H-protein M2908_RS00355 PF02347 Glycine cleavage system P-protein M2908_RS00360 PF02347 Glycine cleavage system P-protein M2908_RS00370 PF01812 5-formyltetrahydrofolate cyclo-ligase family M2908_RS00375 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M2908_RS00375 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M2908_RS00390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M2908_RS00390 PF08501 Shikimate dehydrogenase substrate binding domain M2908_RS00395 PF18152 DAHP synthase ferredoxin-like domain M2908_RS00395 PF00793 DAHP synthetase I family M2908_RS00400 PF01761 3-dehydroquinate synthase M2908_RS00405 PF01264 Chorismate synthase M2908_RS00410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2908_RS00415 PF01202 Shikimate kinase M2908_RS00420 PF03816 Cell envelope-related transcriptional attenuator domain M2908_RS00425 PF02645 Uncharacterised protein, DegV family COG1307 M2908_RS00430 PF00232 Glycosyl hydrolase family 1 M2908_RS00435 PF07690 Major Facilitator Superfamily M2908_RS00445 PF01336 OB-fold nucleic acid binding domain M2908_RS00445 PF02811 PHP domain M2908_RS00445 PF14579 Helix-hairpin-helix motif M2908_RS00445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2908_RS00445 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2908_RS00450 PF00365 Phosphofructokinase M2908_RS00455 PF02887 Pyruvate kinase, alpha/beta domain M2908_RS00455 PF00224 Pyruvate kinase, barrel domain M2908_RS00455 PF00391 PEP-utilising enzyme, mobile domain M2908_RS00460 PF17820 PDZ domain M2908_RS00460 PF01471 Putative peptidoglycan binding domain M2908_RS00460 PF03572 Peptidase family S41 M2908_RS00465 PF10502 Signal peptidase, peptidase S26 M2908_RS00470 PF01926 50S ribosome-binding GTPase M2908_RS00475 PF01351 Ribonuclease HII M2908_RS00480 PF18255 DNA processing protein A sterile alpha motif domain M2908_RS00480 PF02481 DNA recombination-mediator protein A M2908_RS00485 PF01131 DNA topoisomerase M2908_RS00485 PF01751 Toprim domain M2908_RS00485 PF01396 Topoisomerase DNA binding C4 zinc finger M2908_RS00490 PF01134 Glucose inhibited division protein A M2908_RS00500 PF02899 Phage integrase, N-terminal SAM-like domain M2908_RS00500 PF00589 Phage integrase family M2908_RS00505 PF00227 Proteasome subunit M2908_RS00510 PF10431 C-terminal, D2-small domain, of ClpB protein M2908_RS00510 PF07724 AAA domain (Cdc48 subfamily) M2908_RS00510 PF00004 ATPase family associated with various cellular activities (AAA) M2908_RS00515 PF08222 CodY helix-turn-helix domain M2908_RS00515 PF06018 CodY GAF-like domain M2908_RS00525 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2908_RS00525 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2908_RS00530 PF02660 Glycerol-3-phosphate acyltransferase M2908_RS00535 PF00842 Alanine racemase, C-terminal domain M2908_RS00535 PF01168 Alanine racemase, N-terminal domain M2908_RS00540 PF01751 Toprim domain M2908_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS00540 PF00986 DNA gyrase B subunit, carboxyl terminus M2908_RS00540 PF00204 DNA gyrase B M2908_RS00545 PF00521 DNA gyrase/topoisomerase IV, subunit A M2908_RS00545 PF03989 DNA gyrase C-terminal domain, beta-propeller M2908_RS00550 PF00155 Aminotransferase class I and II M2908_RS00555 PF00293 NUDIX domain M2908_RS00560 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M2908_RS00565 PF00448 SRP54-type protein, GTPase domain M2908_RS00565 PF02881 SRP54-type protein, helical bundle domain M2908_RS00565 PF02978 Signal peptide binding domain M2908_RS00570 PF00886 Ribosomal protein S16 M2908_RS00580 PF01782 RimM N-terminal domain M2908_RS00580 PF05239 PRC-barrel domain M2908_RS00585 PF01746 tRNA (Guanine-1)-methyltransferase M2908_RS00590 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase M2908_RS00595 PF00265 Thymidine kinase M2908_RS00600 PF03462 PCRF domain M2908_RS00600 PF00472 RF-1 domain M2908_RS00605 PF05175 Methyltransferase small domain M2908_RS00605 PF17827 PrmC N-terminal domain M2908_RS00610 PF01300 Telomere recombination M2908_RS00610 PF03481 Putative GTP-binding controlling metal-binding M2908_RS00615 PF00464 Serine hydroxymethyltransferase M2908_RS00640 PF01098 Cell cycle protein M2908_RS00645 PF03960 ArsC family M2908_RS00650 PF01597 Glycine cleavage H-protein M2908_RS00655 PF09383 NIL domain M2908_RS00655 PF00005 ABC transporter M2908_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS00665 PF03180 NLPA lipoprotein M2908_RS00675 PF01751 Toprim domain M2908_RS00675 PF01131 DNA topoisomerase M2908_RS00680 PF17854 FtsK alpha domain M2908_RS00680 PF01580 FtsK/SpoIIIE family M2908_RS00680 PF09397 Ftsk gamma domain M2908_RS00685 PF07556 Protein of unknown function (DUF1538) M2908_RS00695 PF00999 Sodium/hydrogen exchanger family M2908_RS00700 PF04055 Radical SAM superfamily M2908_RS00705 PF02562 PhoH-like protein M2908_RS00710 PF07697 7TM-HD extracellular M2908_RS00710 PF01966 HD domain M2908_RS00710 PF07698 7TM receptor with intracellular HD hydrolase M2908_RS00715 PF02130 Uncharacterized protein family UPF0054 M2908_RS00720 PF01219 Prokaryotic diacylglycerol kinase M2908_RS00725 PF07650 KH domain M2908_RS00725 PF01926 50S ribosome-binding GTPase M2908_RS00730 PF02565 Recombination protein O C terminal M2908_RS00730 PF11967 Recombination protein O N terminal M2908_RS00735 PF02091 Glycyl-tRNA synthetase alpha subunit M2908_RS00740 PF05746 DALR anticodon binding domain M2908_RS00740 PF02092 Glycyl-tRNA synthetase beta subunit M2908_RS00745 PF08275 DNA primase catalytic core, N-terminal domain M2908_RS00745 PF10410 DnaB-helicase binding domain of primase M2908_RS00745 PF01807 CHC2 zinc finger M2908_RS00750 PF03979 Sigma-70 factor, region 1.1 M2908_RS00750 PF00140 Sigma-70 factor, region 1.2 M2908_RS00750 PF04542 Sigma-70 region 2 M2908_RS00750 PF04545 Sigma-70, region 4 M2908_RS00750 PF04539 Sigma-70 region 3 M2908_RS00765 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M2908_RS00770 PF01784 NIF3 (NGG1p interacting factor 3) M2908_RS00775 PF07687 Peptidase dimerisation domain M2908_RS00775 PF01546 Peptidase family M20/M25/M40 M2908_RS00790 PF10431 C-terminal, D2-small domain, of ClpB protein M2908_RS00790 PF02861 Clp amino terminal domain, pathogenicity island component M2908_RS00790 PF17871 AAA lid domain M2908_RS00790 PF07724 AAA domain (Cdc48 subfamily) M2908_RS00790 PF00004 ATPase family associated with various cellular activities (AAA) M2908_RS00800 PF00009 Elongation factor Tu GTP binding domain M2908_RS00800 PF03144 Elongation factor Tu domain 2 M2908_RS00800 PF00679 Elongation factor G C-terminus M2908_RS00800 PF06421 GTP-binding protein LepA C-terminus M2908_RS00805 PF00589 Phage integrase family M2908_RS00805 PF02899 Phage integrase, N-terminal SAM-like domain M2908_RS00855 PF00690 Cation transporter/ATPase, N-terminus M2908_RS00855 PF00689 Cation transporting ATPase, C-terminus M2908_RS00860 PF01636 Phosphotransferase enzyme family M2908_RS00865 PF01008 Initiation factor 2 subunit family M2908_RS00870 PF00596 Class II Aldolase and Adducin N-terminal domain M2908_RS00875 PF00291 Pyridoxal-phosphate dependent enzyme M2908_RS00885 PF02576 RimP N-terminal domain M2908_RS00885 PF17384 RimP C-terminal SH3 domain M2908_RS00890 PF00575 S1 RNA binding domain M2908_RS00890 PF08529 NusA N-terminal domain M2908_RS00890 PF13184 NusA-like KH domain M2908_RS00895 PF04296 Protein of unknown function (DUF448) M2908_RS00900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M2908_RS00905 PF11987 Translation-initiation factor 2 M2908_RS00905 PF00009 Elongation factor Tu GTP binding domain M2908_RS00905 PF04760 Translation initiation factor IF-2, N-terminal region M2908_RS00910 PF02033 Ribosome-binding factor A M2908_RS00915 PF01509 TruB family pseudouridylate synthase (N terminal domain) M2908_RS00915 PF16198 tRNA pseudouridylate synthase B C-terminal domain M2908_RS00920 PF01687 Riboflavin kinase M2908_RS00920 PF06574 FAD synthetase M2908_RS00925 PF06969 HemN C-terminal domain M2908_RS00925 PF04055 Radical SAM superfamily M2908_RS00930 PF01628 HrcA protein C terminal domain M2908_RS00935 PF01025 GrpE M2908_RS00940 PF00012 Hsp70 protein M2908_RS00945 PF00226 DnaJ domain M2908_RS00945 PF01556 DnaJ C terminal domain M2908_RS00945 PF00684 DnaJ central domain M2908_RS00950 PF01297 Zinc-uptake complex component A periplasmic M2908_RS00950 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2908_RS00955 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS00960 PF01321 Creatinase/Prolidase N-terminal domain M2908_RS00960 PF00557 Metallopeptidase family M24 M2908_RS00965 PF00356 Bacterial regulatory proteins, lacI family M2908_RS00970 PF00905 Penicillin binding protein transpeptidase domain M2908_RS00970 PF00912 Transglycosylase M2908_RS00975 PF00579 tRNA synthetases class I (W and Y) M2908_RS00975 PF01479 S4 domain M2908_RS00980 PF01261 Xylose isomerase-like TIM barrel M2908_RS00985 PF03672 Uncharacterised protein family (UPF0154) M2908_RS00990 PF00664 ABC transporter transmembrane region M2908_RS00990 PF00005 ABC transporter M2908_RS00995 PF00664 ABC transporter transmembrane region M2908_RS00995 PF00005 ABC transporter M2908_RS01000 PF01554 MatE M2908_RS01005 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS01010 PF05636 HIGH Nucleotidyl Transferase M2908_RS01015 PF00085 Thioredoxin M2908_RS01020 PF01546 Peptidase family M20/M25/M40 M2908_RS01025 PF01547 Bacterial extracellular solute-binding protein M2908_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS01040 PF03632 Glycosyl hydrolase family 65 central catalytic domain M2908_RS01040 PF03636 Glycosyl hydrolase family 65, N-terminal domain M2908_RS01040 PF03633 Glycosyl hydrolase family 65, C-terminal domain M2908_RS01045 PF13419 Haloacid dehalogenase-like hydrolase M2908_RS01050 PF00171 Aldehyde dehydrogenase family M2908_RS01055 PF00005 ABC transporter M2908_RS01060 PF02687 FtsX-like permease family M2908_RS01065 PF00583 Acetyltransferase (GNAT) family M2908_RS01065 PF01047 MarR family M2908_RS01090 PF00309 Sigma-54 factor, Activator interacting domain (AID) M2908_RS01090 PF04963 Sigma-54 factor, core binding domain M2908_RS01090 PF04552 Sigma-54, DNA binding domain M2908_RS01095 PF03819 MazG nucleotide pyrophosphohydrolase domain M2908_RS01100 PF13735 tRNA nucleotidyltransferase domain 2 putative M2908_RS01100 PF12627 Probable RNA and SrmB- binding site of polymerase A M2908_RS01100 PF01743 Poly A polymerase head domain M2908_RS01115 PF16657 Maltogenic Amylase, C-terminal domain M2908_RS01115 PF00128 Alpha amylase, catalytic domain M2908_RS01120 PF00128 Alpha amylase, catalytic domain M2908_RS01120 PF16657 Maltogenic Amylase, C-terminal domain M2908_RS01125 PF12848 ABC transporter M2908_RS01125 PF16326 ABC transporter C-terminal domain M2908_RS01125 PF00005 ABC transporter M2908_RS01130 PF00303 Thymidylate synthase M2908_RS01135 PF00186 Dihydrofolate reductase M2908_RS01140 PF13537 Glutamine amidotransferase domain M2908_RS01140 PF00733 Asparagine synthase M2908_RS01145 PF02875 Mur ligase family, glutamate ligase domain M2908_RS01145 PF08245 Mur ligase middle domain M2908_RS01155 PF01177 Asp/Glu/Hydantoin racemase M2908_RS01160 PF03006 Haemolysin-III related M2908_RS01165 PF02645 Uncharacterised protein, DegV family COG1307 M2908_RS01170 PF13472 GDSL-like Lipase/Acylhydrolase family M2908_RS01175 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) M2908_RS01180 PF01625 Peptide methionine sulfoxide reductase M2908_RS01185 PF06855 YozE SAM-like fold M2908_RS01190 PF01594 AI-2E family transporter M2908_RS01195 PF01757 Acyltransferase family M2908_RS01210 PF00005 ABC transporter M2908_RS01215 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2908_RS01220 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS01225 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS01230 PF08125 Mannitol dehydrogenase C-terminal domain M2908_RS01230 PF01232 Mannitol dehydrogenase Rossmann domain M2908_RS01235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2908_RS01240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2908_RS01240 PF05043 Mga helix-turn-helix domain M2908_RS01240 PF08279 HTH domain M2908_RS01240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2908_RS01240 PF00874 PRD domain M2908_RS01245 PF02378 Phosphotransferase system, EIIC M2908_RS01245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2908_RS01255 PF02390 Putative methyltransferase M2908_RS01260 PF01546 Peptidase family M20/M25/M40 M2908_RS01260 PF07687 Peptidase dimerisation domain M2908_RS01270 PF00654 Voltage gated chloride channel M2908_RS01275 PF00672 HAMP domain M2908_RS01275 PF00512 His Kinase A (phospho-acceptor) domain M2908_RS01275 PF00989 PAS fold M2908_RS01275 PF18698 Histidine kinase sensor domain M2908_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS01280 PF00486 Transcriptional regulatory protein, C terminal M2908_RS01280 PF00072 Response regulator receiver domain M2908_RS01285 PF12849 PBP superfamily domain M2908_RS01290 PF00999 Sodium/hydrogen exchanger family M2908_RS01290 PF02080 TrkA-C domain M2908_RS01290 PF02254 TrkA-N domain M2908_RS01300 PF00156 Phosphoribosyl transferase domain M2908_RS01305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2908_RS01310 PF01180 Dihydroorotate dehydrogenase M2908_RS01315 PF00970 Oxidoreductase FAD-binding domain M2908_RS01315 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M2908_RS01320 PF02142 MGS-like domain M2908_RS01320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M2908_RS01320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2908_RS01325 PF00117 Glutamine amidotransferase class-I M2908_RS01325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M2908_RS01330 PF01979 Amidohydrolase family M2908_RS01335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M2908_RS01335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M2908_RS01340 PF00860 Permease family M2908_RS01345 PF00156 Phosphoribosyl transferase domain M2908_RS01350 PF01479 S4 domain M2908_RS01350 PF00849 RNA pseudouridylate synthase M2908_RS01355 PF01252 Signal peptidase (SPase) II M2908_RS01370 PF00313 'Cold-shock' DNA-binding domain M2908_RS01380 PF13456 Reverse transcriptase-like M2908_RS01385 PF00375 Sodium:dicarboxylate symporter family M2908_RS01390 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M2908_RS01395 PF01170 Putative RNA methylase family UPF0020 M2908_RS01395 PF02926 THUMP domain M2908_RS01405 PF05103 DivIVA protein M2908_RS01410 PF06908 YspA SLOG family M2908_RS01415 PF03838 Recombination protein U M2908_RS01420 PF00912 Transglycosylase M2908_RS01420 PF00905 Penicillin binding protein transpeptidase domain M2908_RS01425 PF00633 Helix-hairpin-helix motif M2908_RS01425 PF10576 Iron-sulfur binding domain of endonuclease III M2908_RS01425 PF00730 HhH-GPD superfamily base excision DNA repair protein M2908_RS01440 PF00156 Phosphoribosyl transferase domain M2908_RS01445 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M2908_RS01445 PF17768 RecJ OB domain M2908_RS01445 PF02272 DHHA1 domain M2908_RS01445 PF01368 DHH family M2908_RS01450 PF01297 Zinc-uptake complex component A periplasmic M2908_RS01450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M2908_RS01455 PF07683 Cobalamin synthesis protein cobW C-terminal domain M2908_RS01455 PF02492 CobW/HypB/UreG, nucleotide-binding domain M2908_RS01465 PF00106 short chain dehydrogenase M2908_RS01470 PF12706 Beta-lactamase superfamily domain M2908_RS01470 PF00753 Metallo-beta-lactamase superfamily M2908_RS01475 PF09269 Domain of unknown function (DUF1967) M2908_RS01475 PF01018 GTP1/OBG M2908_RS01475 PF01926 50S ribosome-binding GTPase M2908_RS01480 PF00465 Iron-containing alcohol dehydrogenase M2908_RS01485 PF00871 Acetokinase family M2908_RS01495 PF06130 Phosphate propanoyltransferase M2908_RS01500 PF00171 Aldehyde dehydrogenase family M2908_RS01505 PF00465 Iron-containing alcohol dehydrogenase M2908_RS01510 PF02954 Bacterial regulatory protein, Fis family M2908_RS01510 PF13426 PAS domain M2908_RS01510 PF00158 Sigma-54 interaction domain M2908_RS01520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2908_RS01525 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal M2908_RS01525 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal M2908_RS01530 PF00368 Hydroxymethylglutaryl-coenzyme A reductase M2908_RS01545 PF00288 GHMP kinases N terminal domain M2908_RS01545 PF10509 Galactokinase galactose-binding signature M2908_RS01545 PF08544 GHMP kinases C terminal M2908_RS01555 PF08544 GHMP kinases C terminal M2908_RS01555 PF00288 GHMP kinases N terminal domain M2908_RS01560 PF01070 FMN-dependent dehydrogenase M2908_RS01575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M2908_RS01575 PF00056 lactate/malate dehydrogenase, NAD binding domain M2908_RS01580 PF07729 FCD domain M2908_RS01580 PF00392 Bacterial regulatory proteins, gntR family M2908_RS01585 PF00005 ABC transporter M2908_RS01585 PF00571 CBS domain M2908_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS01630 PF08998 Bacterial epsilon antitoxin M2908_RS01640 PF13614 AAA domain M2908_RS01650 PF00398 Ribosomal RNA adenine dimethylase M2908_RS01655 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) M2908_RS01665 PF01751 Toprim domain M2908_RS01665 PF01131 DNA topoisomerase M2908_RS01675 PF00156 Phosphoribosyl transferase domain M2908_RS01690 PF01636 Phosphotransferase enzyme family M2908_RS01695 PF00583 Acetyltransferase (GNAT) family M2908_RS01705 PF01636 Phosphotransferase enzyme family M2908_RS01710 PF00583 Acetyltransferase (GNAT) family M2908_RS01725 PF00398 Ribosomal RNA adenine dimethylase M2908_RS01730 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) M2908_RS01745 PF02486 Replication initiation factor M2908_RS01750 PF00302 Chloramphenicol acetyltransferase M2908_RS01760 PF00239 Resolvase, N terminal domain M2908_RS01760 PF02796 Helix-turn-helix domain of resolvase M2908_RS01770 PF08708 Primase C terminal 1 (PriCT-1) M2908_RS01790 PF03952 Enolase, N-terminal domain M2908_RS01790 PF00113 Enolase, C-terminal TIM barrel domain M2908_RS01795 PF01676 Metalloenzyme superfamily M2908_RS01795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M2908_RS01800 PF00121 Triosephosphate isomerase M2908_RS01805 PF00162 Phosphoglycerate kinase M2908_RS01810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M2908_RS01810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M2908_RS01815 PF04198 Putative sugar-binding domain M2908_RS01820 PF08864 UPF0302 domain M2908_RS01820 PF08858 IDEAL domain M2908_RS01830 PF00216 Bacterial DNA-binding protein M2908_RS01835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M2908_RS01835 PF01926 50S ribosome-binding GTPase M2908_RS01840 PF00575 S1 RNA binding domain M2908_RS01845 PF02224 Cytidylate kinase M2908_RS01855 PF00271 Helicase conserved C-terminal domain M2908_RS01855 PF00270 DEAD/DEAH box helicase M2908_RS01870 PF12822 ECF transporter, substrate-specific component M2908_RS01875 PF00486 Transcriptional regulatory protein, C terminal M2908_RS01875 PF00072 Response regulator receiver domain M2908_RS01880 PF01479 S4 domain M2908_RS01880 PF00849 RNA pseudouridylate synthase M2908_RS01885 PF04079 Segregation and condensation complex subunit ScpB M2908_RS01890 PF02616 Segregation and condensation protein ScpA M2908_RS01895 PF00589 Phage integrase family M2908_RS01895 PF02899 Phage integrase, N-terminal SAM-like domain M2908_RS01900 PF01475 Ferric uptake regulator family M2908_RS01910 PF13509 S1 domain M2908_RS01910 PF17783 CvfB-like winged helix domain M2908_RS01920 PF03591 AzlC protein M2908_RS01925 PF00860 Permease family M2908_RS01935 PF00403 Heavy-metal-associated domain M2908_RS01940 PF00403 Heavy-metal-associated domain M2908_RS01945 PF03965 Penicillinase repressor M2908_RS01950 PF01336 OB-fold nucleic acid binding domain M2908_RS01950 PF00152 tRNA synthetases class II (D, K and N) M2908_RS01955 PF00155 Aminotransferase class I and II M2908_RS01965 PF13307 Helicase C-terminal domain M2908_RS01965 PF04851 Type III restriction enzyme, res subunit M2908_RS01965 PF00929 Exonuclease M2908_RS01980 PF00849 RNA pseudouridylate synthase M2908_RS01980 PF01479 S4 domain M2908_RS01985 PF01368 DHH family M2908_RS01985 PF02833 DHHA2 domain M2908_RS01990 PF04055 Radical SAM superfamily M2908_RS01995 PF02901 Pyruvate formate lyase-like M2908_RS01995 PF01228 Glycine radical M2908_RS02000 PF13091 PLD-like domain M2908_RS02010 PF00294 pfkB family carbohydrate kinase M2908_RS02015 PF01791 DeoC/LacD family aldolase M2908_RS02020 PF02502 Ribose/Galactose Isomerase M2908_RS02025 PF02502 Ribose/Galactose Isomerase M2908_RS02030 PF08220 DeoR-like helix-turn-helix domain M2908_RS02030 PF00455 DeoR C terminal sensor domain M2908_RS02040 PF00232 Glycosyl hydrolase family 1 M2908_RS02045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2908_RS02045 PF02378 Phosphotransferase system, EIIC M2908_RS02050 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M2908_RS02055 PF03466 LysR substrate binding domain M2908_RS02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2908_RS02065 PF02817 e3 binding domain M2908_RS02065 PF00364 Biotin-requiring enzyme M2908_RS02065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2908_RS02070 PF02779 Transketolase, pyrimidine binding domain M2908_RS02070 PF02780 Transketolase, C-terminal domain M2908_RS02075 PF00676 Dehydrogenase E1 component M2908_RS02080 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS02080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS02085 PF00871 Acetokinase family M2908_RS02090 PF01515 Phosphate acetyl/butaryl transferase M2908_RS02095 PF12146 Serine aminopeptidase, S33 M2908_RS02105 PF01470 Pyroglutamyl peptidase M2908_RS02125 PF01883 Iron-sulfur cluster assembly protein M2908_RS02130 PF00326 Prolyl oligopeptidase family M2908_RS02135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS02135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2908_RS02140 PF02632 BioY family M2908_RS02145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2908_RS02150 PF01245 Ribosomal protein L19 M2908_RS02160 PF00574 Clp protease M2908_RS02165 PF10298 WhiA N-terminal LAGLIDADG-like domain M2908_RS02165 PF14527 WhiA LAGLIDADG-like domain M2908_RS02165 PF02650 WhiA C-terminal HTH domain M2908_RS02170 PF01933 Uncharacterised protein family UPF0052 M2908_RS02175 PF03668 P-loop ATPase protein family M2908_RS02180 PF01063 Amino-transferase class IV M2908_RS02185 PF17760 UvrA interaction domain M2908_RS02185 PF17755 UvrA DNA-binding domain M2908_RS02185 PF00005 ABC transporter M2908_RS02190 PF12344 Ultra-violet resistance protein B M2908_RS02190 PF00271 Helicase conserved C-terminal domain M2908_RS02190 PF04851 Type III restriction enzyme, res subunit M2908_RS02190 PF02151 UvrB/uvrC motif M2908_RS02190 PF17757 UvrB interaction domain M2908_RS02200 PF00356 Bacterial regulatory proteins, lacI family M2908_RS02205 PF03553 Na+/H+ antiporter family M2908_RS02210 PF01361 Tautomerase enzyme M2908_RS02215 PF02522 Aminoglycoside 3-N-acetyltransferase M2908_RS02220 PF18041 MapZ extracellular domain 1 M2908_RS02220 PF18708 MapZ extracellular C-terminal domain 2 M2908_RS02230 PF08353 Domain of unknown function (DUF1727) M2908_RS02230 PF08245 Mur ligase middle domain M2908_RS02235 PF07685 CobB/CobQ-like glutamine amidotransferase domain M2908_RS02240 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2908_RS02240 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS02250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS02255 PF07690 Major Facilitator Superfamily M2908_RS02260 PF00144 Beta-lactamase M2908_RS02265 PF02705 K+ potassium transporter M2908_RS02275 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02280 PF00005 ABC transporter M2908_RS02290 PF09924 Uncharacterised conserved protein (DUF2156) M2908_RS02290 PF03706 Lysylphosphatidylglycerol synthase TM region M2908_RS02295 PF03807 NADP oxidoreductase coenzyme F420-dependent M2908_RS02295 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2908_RS02305 PF02056 Family 4 glycosyl hydrolase M2908_RS02305 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2908_RS02310 PF01712 Deoxynucleoside kinase M2908_RS02325 PF00005 ABC transporter M2908_RS02330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS02335 PF00398 Ribosomal RNA adenine dimethylase M2908_RS02340 PF01678 Diaminopimelate epimerase M2908_RS02345 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M2908_RS02345 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M2908_RS02355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2908_RS02355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2908_RS02365 PF02080 TrkA-C domain M2908_RS02365 PF02254 TrkA-N domain M2908_RS02370 PF00196 Bacterial regulatory proteins, luxR family M2908_RS02370 PF00072 Response regulator receiver domain M2908_RS02375 PF00672 HAMP domain M2908_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS02375 PF07730 Histidine kinase M2908_RS02385 PF01272 Transcription elongation factor, GreA/GreB, C-term M2908_RS02385 PF03449 Transcription elongation factor, N-terminal M2908_RS02390 PF02618 YceG-like family M2908_RS02395 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2908_RS02400 PF00005 ABC transporter M2908_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS02415 PF00072 Response regulator receiver domain M2908_RS02415 PF00486 Transcriptional regulatory protein, C terminal M2908_RS02420 PF00300 Histidine phosphatase superfamily (branch 1) M2908_RS02435 PF04997 RNA polymerase Rpb1, domain 1 M2908_RS02435 PF00623 RNA polymerase Rpb1, domain 2 M2908_RS02435 PF04983 RNA polymerase Rpb1, domain 3 M2908_RS02435 PF05000 RNA polymerase Rpb1, domain 4 M2908_RS02435 PF04998 RNA polymerase Rpb1, domain 5 M2908_RS02440 PF04565 RNA polymerase Rpb2, domain 3 M2908_RS02440 PF10385 RNA polymerase beta subunit external 1 domain M2908_RS02440 PF00562 RNA polymerase Rpb2, domain 6 M2908_RS02440 PF04560 RNA polymerase Rpb2, domain 7 M2908_RS02440 PF04561 RNA polymerase Rpb2, domain 2 M2908_RS02440 PF04563 RNA polymerase beta subunit M2908_RS02445 PF00814 Glycoprotease family M2908_RS02450 PF00583 Acetyltransferase (GNAT) family M2908_RS02460 PF00814 Glycoprotease family M2908_RS02465 PF00356 Bacterial regulatory proteins, lacI family M2908_RS02470 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M2908_RS02470 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M2908_RS02475 PF16363 GDP-mannose 4,6 dehydratase M2908_RS02480 PF10509 Galactokinase galactose-binding signature M2908_RS02480 PF08544 GHMP kinases C terminal M2908_RS02480 PF00288 GHMP kinases N terminal domain M2908_RS02485 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M2908_RS02495 PF01380 SIS domain M2908_RS02500 PF13520 Amino acid permease M2908_RS02505 PF01813 ATP synthase subunit D M2908_RS02510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2908_RS02510 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2908_RS02515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2908_RS02515 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2908_RS02515 PF16886 ATPsynthase alpha/beta subunit N-term extension M2908_RS02520 PF01990 ATP synthase (F/14-kDa) subunit M2908_RS02525 PF01992 ATP synthase (C/AC39) subunit M2908_RS02535 PF00137 ATP synthase subunit C M2908_RS02540 PF01496 V-type ATPase 116kDa subunit family M2908_RS02550 PF02554 Carbon starvation protein CstA M2908_RS02555 PF04397 LytTr DNA-binding domain M2908_RS02555 PF00072 Response regulator receiver domain M2908_RS02560 PF07694 5TMR of 5TMR-LYT M2908_RS02560 PF13492 GAF domain M2908_RS02560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS02560 PF06580 Histidine kinase M2908_RS02565 PF00270 DEAD/DEAH box helicase M2908_RS02565 PF00271 Helicase conserved C-terminal domain M2908_RS02575 PF07687 Peptidase dimerisation domain M2908_RS02575 PF01546 Peptidase family M20/M25/M40 M2908_RS02580 PF03180 NLPA lipoprotein M2908_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02590 PF00005 ABC transporter M2908_RS02590 PF09383 NIL domain M2908_RS02595 PF00326 Prolyl oligopeptidase family M2908_RS02605 PF00271 Helicase conserved C-terminal domain M2908_RS02605 PF00570 HRDC domain M2908_RS02605 PF09382 RQC domain M2908_RS02605 PF16124 RecQ zinc-binding M2908_RS02605 PF00270 DEAD/DEAH box helicase M2908_RS02610 PF00120 Glutamine synthetase, catalytic domain M2908_RS02610 PF03951 Glutamine synthetase, beta-Grasp domain M2908_RS02615 PF01545 Cation efflux family M2908_RS02615 PF16916 Dimerisation domain of Zinc Transporter M2908_RS02620 PF01266 FAD dependent oxidoreductase M2908_RS02640 PF06738 Putative threonine/serine exporter M2908_RS02645 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02650 PF00005 ABC transporter M2908_RS02655 PF00871 Acetokinase family M2908_RS02660 PF01515 Phosphate acetyl/butaryl transferase M2908_RS02665 PF00364 Biotin-requiring enzyme M2908_RS02665 PF02817 e3 binding domain M2908_RS02665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2908_RS02670 PF02779 Transketolase, pyrimidine binding domain M2908_RS02670 PF02780 Transketolase, C-terminal domain M2908_RS02675 PF00676 Dehydrogenase E1 component M2908_RS02685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2908_RS02685 PF03466 LysR substrate binding domain M2908_RS02690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M2908_RS02695 PF01039 Carboxyl transferase domain M2908_RS02700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2908_RS02700 PF00289 Biotin carboxylase, N-terminal domain M2908_RS02700 PF02785 Biotin carboxylase C-terminal domain M2908_RS02705 PF07977 FabA-like domain M2908_RS02710 PF00364 Biotin-requiring enzyme M2908_RS02715 PF02801 Beta-ketoacyl synthase, C-terminal domain M2908_RS02715 PF00109 Beta-ketoacyl synthase, N-terminal domain M2908_RS02725 PF00698 Acyl transferase domain M2908_RS02730 PF03060 Nitronate monooxygenase M2908_RS02735 PF00550 Phosphopantetheine attachment site M2908_RS02740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M2908_RS02740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M2908_RS02750 PF00392 Bacterial regulatory proteins, gntR family M2908_RS02750 PF00155 Aminotransferase class I and II M2908_RS02755 PF08543 Phosphomethylpyrimidine kinase M2908_RS02765 PF00478 IMP dehydrogenase / GMP reductase domain M2908_RS02775 PF13649 Methyltransferase domain M2908_RS02785 PF01966 HD domain M2908_RS02790 PF01467 Cytidylyltransferase-like M2908_RS02795 PF01985 CRS1 / YhbY (CRM) domain M2908_RS02800 PF01926 50S ribosome-binding GTPase M2908_RS02815 PF01926 50S ribosome-binding GTPase M2908_RS02830 PF03441 FAD binding domain of DNA photolyase M2908_RS02830 PF00875 DNA photolyase M2908_RS02840 PF03358 NADPH-dependent FMN reductase M2908_RS02850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2908_RS02855 PF01047 MarR family M2908_RS02865 PF13476 AAA domain M2908_RS02870 PF12320 Type 5 capsule protein repressor C-terminal domain M2908_RS02870 PF00149 Calcineurin-like phosphoesterase M2908_RS02875 PF01476 LysM domain M2908_RS02875 PF00756 Putative esterase M2908_RS02905 PF01546 Peptidase family M20/M25/M40 M2908_RS02905 PF07687 Peptidase dimerisation domain M2908_RS02915 PF00480 ROK family M2908_RS02945 PF02743 Cache domain M2908_RS02945 PF00672 HAMP domain M2908_RS02945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS02945 PF06580 Histidine kinase M2908_RS02950 PF00072 Response regulator receiver domain M2908_RS02950 PF00196 Bacterial regulatory proteins, luxR family M2908_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02965 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS02990 PF00232 Glycosyl hydrolase family 1 M2908_RS02995 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2908_RS02995 PF00367 phosphotransferase system, EIIB M2908_RS02995 PF02378 Phosphotransferase system, EIIC M2908_RS03000 PF03123 CAT RNA binding domain M2908_RS03000 PF00874 PRD domain M2908_RS03025 PF00890 FAD binding domain M2908_RS03025 PF04205 FMN-binding domain M2908_RS03025 PF03358 NADPH-dependent FMN reductase M2908_RS03040 PF00854 POT family M2908_RS03045 PF10417 C-terminal domain of 1-Cys peroxiredoxin M2908_RS03045 PF00578 AhpC/TSA family M2908_RS03070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2908_RS03075 PF04205 FMN-binding domain M2908_RS03075 PF00890 FAD binding domain M2908_RS03080 PF02743 Cache domain M2908_RS03080 PF00672 HAMP domain M2908_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS03080 PF06580 Histidine kinase M2908_RS03085 PF12833 Helix-turn-helix domain M2908_RS03085 PF00072 Response regulator receiver domain M2908_RS03095 PF07670 Nucleoside recognition M2908_RS03095 PF02421 Ferrous iron transport protein B M2908_RS03095 PF17910 FeoB cytosolic helical domain M2908_RS03095 PF07664 Ferrous iron transport protein B C terminus M2908_RS03105 PF02378 Phosphotransferase system, EIIC M2908_RS03115 PF01047 MarR family M2908_RS03115 PF00480 ROK family M2908_RS03125 PF00005 ABC transporter M2908_RS03125 PF16326 ABC transporter C-terminal domain M2908_RS03125 PF12848 ABC transporter M2908_RS03145 PF00121 Triosephosphate isomerase M2908_RS03150 PF00365 Phosphofructokinase M2908_RS03155 PF00356 Bacterial regulatory proteins, lacI family M2908_RS03165 PF01979 Amidohydrolase family M2908_RS03170 PF01116 Fructose-bisphosphate aldolase class-II M2908_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03180 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03185 PF01547 Bacterial extracellular solute-binding protein M2908_RS03190 PF00356 Bacterial regulatory proteins, lacI family M2908_RS03195 PF02540 NAD synthase M2908_RS03205 PF00731 AIR carboxylase M2908_RS03210 PF00005 ABC transporter M2908_RS03210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS03215 PF00005 ABC transporter M2908_RS03220 PF12911 N-terminal TM domain of oligopeptide transport permease C M2908_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2908_RS03235 PF01081 KDPG and KHG aldolase M2908_RS03240 PF00294 pfkB family carbohydrate kinase M2908_RS03245 PF01380 SIS domain M2908_RS03250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M2908_RS03275 PF00356 Bacterial regulatory proteins, lacI family M2908_RS03280 PF01458 Uncharacterized protein family (UPF0051) M2908_RS03285 PF01592 NifU-like N terminal domain M2908_RS03290 PF00266 Aminotransferase class-V M2908_RS03295 PF01458 Uncharacterized protein family (UPF0051) M2908_RS03300 PF00005 ABC transporter M2908_RS03305 PF01323 DSBA-like thioredoxin domain M2908_RS03315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M2908_RS03315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M2908_RS03320 PF00005 ABC transporter M2908_RS03320 PF00664 ABC transporter transmembrane region M2908_RS03325 PF00664 ABC transporter transmembrane region M2908_RS03325 PF00005 ABC transporter M2908_RS03330 PF12833 Helix-turn-helix domain M2908_RS03330 PF01497 Periplasmic binding protein M2908_RS03345 PF00266 Aminotransferase class-V M2908_RS03350 PF01757 Acyltransferase family M2908_RS03355 PF00857 Isochorismatase family M2908_RS03360 PF01048 Phosphorylase superfamily M2908_RS03370 PF00293 NUDIX domain M2908_RS03380 PF05816 Toxic anion resistance protein (TelA) M2908_RS03385 PF02655 ATP-grasp domain M2908_RS03385 PF18419 ATP-grasp-like domain M2908_RS03385 PF04262 Glutamate-cysteine ligase M2908_RS03390 PF00448 SRP54-type protein, GTPase domain M2908_RS03390 PF02881 SRP54-type protein, helical bundle domain M2908_RS03400 PF06470 SMC proteins Flexible Hinge Domain M2908_RS03400 PF02463 RecF/RecN/SMC N terminal domain M2908_RS03405 PF00035 Double-stranded RNA binding motif M2908_RS03405 PF14622 Ribonuclease-III-like M2908_RS03410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2908_RS03415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2908_RS03420 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03425 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS03430 PF00005 ABC transporter M2908_RS03430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS03435 PF00005 ABC transporter M2908_RS03435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS03440 PF00550 Phosphopantetheine attachment site M2908_RS03445 PF02504 Fatty acid synthesis protein M2908_RS03450 PF00271 Helicase conserved C-terminal domain M2908_RS03450 PF17191 RecG wedge domain M2908_RS03450 PF00270 DEAD/DEAH box helicase M2908_RS03455 PF02734 DAK2 domain M2908_RS03455 PF13684 Dihydroxyacetone kinase family M2908_RS03460 PF03780 Asp23 family, cell envelope-related function M2908_RS03465 PF00830 Ribosomal L28 family M2908_RS03470 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M2908_RS03470 PF04263 Thiamin pyrophosphokinase, catalytic domain M2908_RS03475 PF00834 Ribulose-phosphate 3 epimerase family M2908_RS03480 PF03193 RsgA GTPase M2908_RS03480 PF16745 RsgA N-terminal domain M2908_RS03490 PF02683 Cytochrome C biogenesis protein transmembrane region M2908_RS03495 PF03793 PASTA domain M2908_RS03495 PF00069 Protein kinase domain M2908_RS03505 PF01189 16S rRNA methyltransferase RsmB/F M2908_RS03505 PF01029 NusB family M2908_RS03510 PF02911 Formyl transferase, C-terminal domain M2908_RS03510 PF00551 Formyl transferase M2908_RS03515 PF01327 Polypeptide deformylase M2908_RS03520 PF18074 Primosomal protein N C-terminal domain M2908_RS03520 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M2908_RS03520 PF04851 Type III restriction enzyme, res subunit M2908_RS03520 PF17764 3′ DNA-binding domain (3′BD) M2908_RS03520 PF00271 Helicase conserved C-terminal domain M2908_RS03525 PF01192 RNA polymerase Rpb6 M2908_RS03530 PF00625 Guanylate kinase M2908_RS03535 PF08340 Domain of unknown function (DUF1732) M2908_RS03535 PF03755 YicC-like family, N-terminal region M2908_RS03540 PF02229 Transcriptional Coactivator p15 (PC4) M2908_RS03555 PF01648 4'-phosphopantetheinyl transferase superfamily M2908_RS03560 PF00270 DEAD/DEAH box helicase M2908_RS03560 PF00271 Helicase conserved C-terminal domain M2908_RS03565 PF08245 Mur ligase middle domain M2908_RS03565 PF02875 Mur ligase family, glutamate ligase domain M2908_RS03565 PF01225 Mur ligase family, catalytic domain M2908_RS03570 PF01820 D-ala D-ala ligase N-terminus M2908_RS03570 PF07478 D-ala D-ala ligase C-terminus M2908_RS03580 PF04203 Sortase domain M2908_RS03585 PF01451 Low molecular weight phosphotyrosine protein phosphatase M2908_RS03590 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M2908_RS03595 PF00133 tRNA synthetases class I (I, L, M and V) M2908_RS03595 PF13603 Leucyl-tRNA synthetase, Domain 2 M2908_RS03595 PF09334 tRNA synthetases class I (M) M2908_RS03595 PF08264 Anticodon-binding domain of tRNA M2908_RS03600 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2908_RS03600 PF01476 LysM domain M2908_RS03615 PF01569 PAP2 superfamily M2908_RS03620 PF16199 Radical_SAM C-terminal domain M2908_RS03620 PF04055 Radical SAM superfamily M2908_RS03625 PF06962 Putative rRNA methylase M2908_RS03630 PF07690 Major Facilitator Superfamily M2908_RS03635 PF02773 S-adenosylmethionine synthetase, C-terminal domain M2908_RS03635 PF02772 S-adenosylmethionine synthetase, central domain M2908_RS03635 PF00438 S-adenosylmethionine synthetase, N-terminal domain M2908_RS03645 PF00542 Ribosomal protein L7/L12 C-terminal domain M2908_RS03645 PF16320 Ribosomal protein L7/L12 dimerisation domain M2908_RS03650 PF00466 Ribosomal protein L10 M2908_RS03655 PF00687 Ribosomal protein L1p/L10e family M2908_RS03660 PF03946 Ribosomal protein L11, N-terminal domain M2908_RS03660 PF00298 Ribosomal protein L11, RNA binding domain M2908_RS03665 PF03315 Serine dehydratase beta chain M2908_RS03665 PF01842 ACT domain M2908_RS03670 PF03313 Serine dehydratase alpha chain M2908_RS03680 PF01228 Glycine radical M2908_RS03680 PF02901 Pyruvate formate lyase-like M2908_RS03690 PF04055 Radical SAM superfamily M2908_RS03695 PF14748 Pyrroline-5-carboxylate reductase dimerisation M2908_RS03695 PF03807 NADP oxidoreductase coenzyme F420-dependent M2908_RS03700 PF06865 Pyrimidine/purine nucleoside phosphorylase M2908_RS03705 PF02357 Transcription termination factor nusG M2908_RS03705 PF00467 KOW motif M2908_RS03715 PF00471 Ribosomal protein L33 M2908_RS03725 PF00270 DEAD/DEAH box helicase M2908_RS03725 PF00271 Helicase conserved C-terminal domain M2908_RS03725 PF18019 HD domain M2908_RS03755 PF00133 tRNA synthetases class I (I, L, M and V) M2908_RS03755 PF08264 Anticodon-binding domain of tRNA M2908_RS03755 PF06827 Zinc finger found in FPG and IleRS M2908_RS03760 PF05103 DivIVA protein M2908_RS03765 PF01479 S4 domain M2908_RS03765 PF17774 Putative RNA-binding domain in YlmH M2908_RS03775 PF04472 Cell division protein SepF M2908_RS03780 PF01168 Alanine racemase, N-terminal domain M2908_RS03785 PF12327 FtsZ family, C-terminal domain M2908_RS03785 PF00091 Tubulin/FtsZ family, GTPase domain M2908_RS03790 PF11983 Membrane-attachment and polymerisation-promoting switch M2908_RS03790 PF02491 SHS2 domain inserted in FTSA M2908_RS03795 PF03799 Cell division protein FtsQ M2908_RS03800 PF04101 Glycosyltransferase family 28 C-terminal domain M2908_RS03800 PF03033 Glycosyltransferase family 28 N-terminal domain M2908_RS03805 PF02875 Mur ligase family, glutamate ligase domain M2908_RS03805 PF08245 Mur ligase middle domain M2908_RS03810 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M2908_RS03810 PF00953 Glycosyl transferase family 4 M2908_RS03815 PF03793 PASTA domain M2908_RS03815 PF03717 Penicillin-binding Protein dimerisation domain M2908_RS03815 PF00905 Penicillin binding protein transpeptidase domain M2908_RS03825 PF01795 MraW methylase family M2908_RS03830 PF02381 MraZ protein, putative antitoxin-like M2908_RS03845 PF02463 RecF/RecN/SMC N terminal domain M2908_RS03850 PF01316 Arginine repressor, DNA binding domain M2908_RS03850 PF02863 Arginine repressor, C-terminal domain M2908_RS03855 PF01728 FtsJ-like methyltransferase M2908_RS03855 PF01479 S4 domain M2908_RS03860 PF00348 Polyprenyl synthetase M2908_RS03865 PF02609 Exonuclease VII small subunit M2908_RS03870 PF02601 Exonuclease VII, large subunit M2908_RS03870 PF13742 OB-fold nucleic acid binding domain M2908_RS03875 PF01029 NusB family M2908_RS03880 PF03780 Asp23 family, cell envelope-related function M2908_RS03885 PF01132 Elongation factor P (EF-P) OB domain M2908_RS03885 PF08207 Elongation factor P (EF-P) KOW-like domain M2908_RS03885 PF09285 Elongation factor P, C-terminal M2908_RS03890 PF00557 Metallopeptidase family M24 M2908_RS03890 PF01321 Creatinase/Prolidase N-terminal domain M2908_RS03895 PF01016 Ribosomal L27 protein M2908_RS03905 PF00829 Ribosomal prokaryotic L21 protein M2908_RS03925 PF00582 Universal stress protein family M2908_RS03930 PF13649 Methyltransferase domain M2908_RS03935 PF06874 Firmicute fructose-1,6-bisphosphatase M2908_RS03940 PF01263 Aldose 1-epimerase M2908_RS03945 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M2908_RS03945 PF01476 LysM domain M2908_RS03950 PF01197 Ribosomal protein L31 M2908_RS03955 PF07497 Rho termination factor, RNA-binding domain M2908_RS03955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2908_RS03955 PF07498 Rho termination factor, N-terminal domain M2908_RS03960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2908_RS03965 PF07943 Penicillin-binding protein 5, C-terminal domain M2908_RS03965 PF00768 D-alanyl-D-alanine carboxypeptidase M2908_RS03975 PF00005 ABC transporter M2908_RS03975 PF00664 ABC transporter transmembrane region M2908_RS03980 PF00005 ABC transporter M2908_RS03980 PF00664 ABC transporter transmembrane region M2908_RS03990 PF05525 Branched-chain amino acid transport protein M2908_RS03995 PF00403 Heavy-metal-associated domain M2908_RS04000 PF00403 Heavy-metal-associated domain M2908_RS04005 PF01814 Hemerythrin HHE cation binding domain M2908_RS04005 PF04405 Domain of Unknown function (DUF542) M2908_RS04010 PF00027 Cyclic nucleotide-binding domain M2908_RS04010 PF13545 Crp-like helix-turn-helix domain M2908_RS04025 PF13427 Domain of unknown function (DUF4111) M2908_RS04025 PF01909 Nucleotidyltransferase domain M2908_RS04030 PF00156 Phosphoribosyl transferase domain M2908_RS04035 PF04439 Streptomycin adenylyltransferase M2908_RS04040 PF08241 Methyltransferase domain M2908_RS04055 PF01938 TRAM domain M2908_RS04055 PF05958 tRNA (Uracil-5-)-methyltransferase M2908_RS04060 PF00781 Diacylglycerol kinase catalytic domain M2908_RS04065 PF02934 GatB/GatE catalytic domain M2908_RS04065 PF02637 GatB domain M2908_RS04070 PF01425 Amidase M2908_RS04075 PF02686 Glu-tRNAGln amidotransferase C subunit M2908_RS04080 PF00533 BRCA1 C Terminus (BRCT) domain M2908_RS04080 PF01653 NAD-dependent DNA ligase adenylation domain M2908_RS04080 PF03120 NAD-dependent DNA ligase OB-fold domain M2908_RS04080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M2908_RS04080 PF12826 Helix-hairpin-helix motif M2908_RS04085 PF00580 UvrD/REP helicase N-terminal domain M2908_RS04085 PF13361 UvrD-like helicase C-terminal domain M2908_RS04095 PF13732 Domain of unknown function (DUF4162) M2908_RS04095 PF00005 ABC transporter M2908_RS04105 PF01541 GIY-YIG catalytic domain M2908_RS04105 PF02151 UvrB/uvrC motif M2908_RS04105 PF08459 UvrC Helix-hairpin-helix N-terminal M2908_RS04185 PF01475 Ferric uptake regulator family M2908_RS04190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2908_RS04190 PF14579 Helix-hairpin-helix motif M2908_RS04190 PF02811 PHP domain M2908_RS04190 PF14480 DNA polymerase III polC-type N-terminus I M2908_RS04190 PF00929 Exonuclease M2908_RS04190 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2908_RS04190 PF11490 DNA polymerase III polC-type N-terminus II M2908_RS04195 PF03129 Anticodon binding domain M2908_RS04195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2908_RS04195 PF04073 Aminoacyl-tRNA editing domain M2908_RS04200 PF02163 Peptidase family M50 M2908_RS04200 PF17820 PDZ domain M2908_RS04210 PF01255 Putative undecaprenyl diphosphate synthase M2908_RS04215 PF00654 Voltage gated chloride channel M2908_RS04220 PF01765 Ribosome recycling factor M2908_RS04225 PF00696 Amino acid kinase family M2908_RS04230 PF00889 Elongation factor TS M2908_RS04235 PF00318 Ribosomal protein S2 M2908_RS04240 PF05175 Methyltransferase small domain M2908_RS04250 PF03061 Thioesterase superfamily M2908_RS04255 PF00485 Phosphoribulokinase / Uridine kinase family M2908_RS04260 PF00117 Glutamine amidotransferase class-I M2908_RS04260 PF00958 GMP synthase C terminal domain M2908_RS04260 PF02540 NAD synthase M2908_RS04270 PF14659 Phage integrase, N-terminal SAM-like domain M2908_RS04270 PF00589 Phage integrase family M2908_RS04315 PF00005 ABC transporter M2908_RS04330 PF13520 Amino acid permease M2908_RS04335 PF07969 Amidohydrolase family M2908_RS04340 PF00364 Biotin-requiring enzyme M2908_RS04340 PF02817 e3 binding domain M2908_RS04340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M2908_RS04345 PF02779 Transketolase, pyrimidine binding domain M2908_RS04345 PF02780 Transketolase, C-terminal domain M2908_RS04350 PF00676 Dehydrogenase E1 component M2908_RS04355 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS04355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS04360 PF00158 Sigma-54 interaction domain M2908_RS04360 PF02954 Bacterial regulatory protein, Fis family M2908_RS04360 PF01590 GAF domain M2908_RS04375 PF00253 Ribosomal protein S14p/S29e M2908_RS04380 PF01522 Polysaccharide deacetylase M2908_RS04380 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain M2908_RS04390 PF01551 Peptidase family M23 M2908_RS04390 PF01464 Transglycosylase SLT domain M2908_RS04390 PF10145 Phage-related minor tail protein M2908_RS04395 PF00232 Glycosyl hydrolase family 1 M2908_RS04400 PF00392 Bacterial regulatory proteins, gntR family M2908_RS04400 PF07702 UTRA domain M2908_RS04405 PF00300 Histidine phosphatase superfamily (branch 1) M2908_RS04410 PF13411 MerR HTH family regulatory protein M2908_RS04425 PF00005 ABC transporter M2908_RS04435 PF00367 phosphotransferase system, EIIB M2908_RS04435 PF02378 Phosphotransferase system, EIIC M2908_RS04440 PF00128 Alpha amylase, catalytic domain M2908_RS04440 PF16657 Maltogenic Amylase, C-terminal domain M2908_RS04445 PF00392 Bacterial regulatory proteins, gntR family M2908_RS04445 PF07702 UTRA domain M2908_RS04450 PF02082 Transcriptional regulator M2908_RS04455 PF01061 ABC-2 type transporter M2908_RS04465 PF00156 Phosphoribosyl transferase domain M2908_RS04470 PF01938 TRAM domain M2908_RS04470 PF05958 tRNA (Uracil-5-)-methyltransferase M2908_RS04475 PF00480 ROK family M2908_RS04485 PF01112 Asparaginase M2908_RS04490 PF01546 Peptidase family M20/M25/M40 M2908_RS04495 PF00392 Bacterial regulatory proteins, gntR family M2908_RS04495 PF07702 UTRA domain M2908_RS04500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2908_RS04500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS04505 PF06257 Biofilm formation stimulator VEG M2908_RS04515 PF01432 Peptidase family M3 M2908_RS04515 PF08439 Oligopeptidase F M2908_RS04520 PF13520 Amino acid permease M2908_RS04525 PF00877 NlpC/P60 family M2908_RS04540 PF00465 Iron-containing alcohol dehydrogenase M2908_RS04540 PF00171 Aldehyde dehydrogenase family M2908_RS04550 PF02699 Preprotein translocase subunit M2908_RS04555 PF01702 Queuine tRNA-ribosyltransferase M2908_RS04560 PF02547 Queuosine biosynthesis protein M2908_RS04565 PF17864 RuvB AAA lid domain M2908_RS04565 PF05491 RuvB C-terminal winged helix domain M2908_RS04565 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2908_RS04570 PF07499 RuvA, C-terminal domain M2908_RS04570 PF01330 RuvA N terminal domain M2908_RS04580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS04580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2908_RS04585 PF00474 Sodium:solute symporter family M2908_RS04590 PF01261 Xylose isomerase-like TIM barrel M2908_RS04595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2908_RS04595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS04600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M2908_RS04600 PF00205 Thiamine pyrophosphate enzyme, central domain M2908_RS04600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M2908_RS04605 PF00294 pfkB family carbohydrate kinase M2908_RS04610 PF04962 KduI/IolB family M2908_RS04615 PF00171 Aldehyde dehydrogenase family M2908_RS04620 PF00455 DeoR C terminal sensor domain M2908_RS04620 PF08220 DeoR-like helix-turn-helix domain M2908_RS04625 PF14552 Tautomerase enzyme M2908_RS04645 PF01497 Periplasmic binding protein M2908_RS04650 PF00005 ABC transporter M2908_RS04655 PF01032 FecCD transport family M2908_RS04660 PF01032 FecCD transport family M2908_RS04665 PF00871 Acetokinase family M2908_RS04670 PF02384 N-6 DNA Methylase M2908_RS04675 PF12822 ECF transporter, substrate-specific component M2908_RS04680 PF02142 MGS-like domain M2908_RS04685 PF17912 MalK OB fold domain M2908_RS04685 PF03459 TOBE domain M2908_RS04685 PF00005 ABC transporter M2908_RS04690 PF00398 Ribosomal RNA adenine dimethylase M2908_RS04695 PF01751 Toprim domain M2908_RS04695 PF13331 Domain of unknown function (DUF4093) M2908_RS04700 PF01026 TatD related DNase M2908_RS04705 PF01588 Putative tRNA binding domain M2908_RS04705 PF09334 tRNA synthetases class I (M) M2908_RS04705 PF08264 Anticodon-binding domain of tRNA M2908_RS04710 PF03009 Glycerophosphoryl diester phosphodiesterase family M2908_RS04715 PF00391 PEP-utilising enzyme, mobile domain M2908_RS04715 PF02896 PEP-utilising enzyme, TIM barrel domain M2908_RS04715 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M2908_RS04720 PF01380 SIS domain M2908_RS04720 PF01418 Helix-turn-helix domain, rpiR family M2908_RS04725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2908_RS04725 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M2908_RS04740 PF14602 Hexapeptide repeat of succinyl-transferase M2908_RS04740 PF12464 Maltose acetyltransferase M2908_RS04745 PF01979 Amidohydrolase family M2908_RS04755 PF01066 CDP-alcohol phosphatidyltransferase M2908_RS04760 PF00155 Aminotransferase class I and II M2908_RS04765 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS04770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2908_RS04775 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS04780 PF00005 ABC transporter M2908_RS04780 PF00571 CBS domain M2908_RS04795 PF18357 Diphteria toxin repressor SH3 domain M2908_RS04795 PF02742 Iron dependent repressor, metal binding and dimerisation domain M2908_RS04795 PF01325 Iron dependent repressor, N-terminal DNA binding domain M2908_RS04800 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M2908_RS04800 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M2908_RS04805 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2908_RS04805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS04810 PF01261 Xylose isomerase-like TIM barrel M2908_RS04820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS04820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2908_RS04825 PF12833 Helix-turn-helix domain M2908_RS04830 PF02673 Bacitracin resistance protein BacA M2908_RS04840 PF01865 Protein of unknown function DUF47 M2908_RS04845 PF01384 Phosphate transporter family M2908_RS04850 PF01649 Ribosomal protein S20 M2908_RS04855 PF06144 DNA polymerase III, delta subunit M2908_RS04860 PF03772 Competence protein M2908_RS04860 PF13567 Domain of unknown function (DUF4131) M2908_RS04860 PF00753 Metallo-beta-lactamase superfamily M2908_RS04865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2908_RS04870 PF10531 SLBB domain M2908_RS04880 PF07664 Ferrous iron transport protein B C terminus M2908_RS04880 PF17910 FeoB cytosolic helical domain M2908_RS04880 PF02421 Ferrous iron transport protein B M2908_RS04880 PF07670 Nucleoside recognition M2908_RS04885 PF00163 Ribosomal protein S4/S9 N-terminal domain M2908_RS04885 PF01479 S4 domain M2908_RS04895 PF13514 AAA domain M2908_RS04905 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS04910 PF00005 ABC transporter M2908_RS04915 PF14693 Ribosomal protein TL5, C-terminal domain M2908_RS04915 PF01386 Ribosomal L25p family M2908_RS04920 PF04260 Protein of unknown function (DUF436) M2908_RS04925 PF00664 ABC transporter transmembrane region M2908_RS04925 PF00005 ABC transporter M2908_RS04930 PF00664 ABC transporter transmembrane region M2908_RS04930 PF00005 ABC transporter M2908_RS04965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M2908_RS04970 PF06156 Initiation control protein YabA M2908_RS04975 PF04468 PSP1 C-terminal conserved region M2908_RS04980 PF09115 DNA polymerase III, delta subunit, C terminal M2908_RS04985 PF06153 Cyclic-di-AMP receptor M2908_RS04990 PF02223 Thymidylate kinase M2908_RS04995 PF02132 RecR protein M2908_RS04995 PF13662 Toprim domain M2908_RS05000 PF02575 YbaB/EbfC DNA-binding family M2908_RS05005 PF12169 DNA polymerase III subunits gamma and tau domain III M2908_RS05030 PF14437 MafB19-like deaminase M2908_RS05035 PF13556 PucR C-terminal helix-turn-helix domain M2908_RS05045 PF04298 Putative neutral zinc metallopeptidase M2908_RS05050 PF03831 PhnA domain M2908_RS05050 PF08274 PhnA Zinc-Ribbon M2908_RS05060 PF00990 Diguanylate cyclase, GGDEF domain M2908_RS05060 PF07694 5TMR of 5TMR-LYT M2908_RS05070 PF02525 Flavodoxin-like fold M2908_RS05080 PF01594 AI-2E family transporter M2908_RS05090 PF10282 Lactonase, 7-bladed beta-propeller M2908_RS05105 PF01116 Fructose-bisphosphate aldolase class-II M2908_RS05110 PF00171 Aldehyde dehydrogenase family M2908_RS05120 PF02558 Ketopantoate reductase PanE/ApbA M2908_RS05120 PF08546 Ketopantoate reductase PanE/ApbA C terminal M2908_RS05130 PF00009 Elongation factor Tu GTP binding domain M2908_RS05130 PF00679 Elongation factor G C-terminus M2908_RS05130 PF03144 Elongation factor Tu domain 2 M2908_RS05130 PF14492 Elongation Factor G, domain II M2908_RS05135 PF00459 Inositol monophosphatase family M2908_RS05140 PF05256 Uncharacterised protein family (UPF0223) M2908_RS05145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS05145 PF00672 HAMP domain M2908_RS05145 PF00512 His Kinase A (phospho-acceptor) domain M2908_RS05150 PF00072 Response regulator receiver domain M2908_RS05150 PF00486 Transcriptional regulatory protein, C terminal M2908_RS05165 PF00781 Diacylglycerol kinase catalytic domain M2908_RS05170 PF03618 Kinase/pyrophosphorylase M2908_RS05175 PF00571 CBS domain M2908_RS05175 PF08279 HTH domain M2908_RS05180 PF04172 LrgB-like family M2908_RS05185 PF03788 LrgA family M2908_RS05195 PF01966 HD domain M2908_RS05200 PF08903 Domain of unknown function (DUF1846) M2908_RS05205 PF01418 Helix-turn-helix domain, rpiR family M2908_RS05205 PF01380 SIS domain M2908_RS05210 PF01641 SelR domain M2908_RS05215 PF02545 Maf-like protein M2908_RS05220 PF01119 DNA mismatch repair protein, C-terminal domain M2908_RS05220 PF08676 MutL C terminal dimerisation domain M2908_RS05225 PF05188 MutS domain II M2908_RS05225 PF01624 MutS domain I M2908_RS05225 PF05192 MutS domain III M2908_RS05225 PF00488 MutS domain V M2908_RS05225 PF05190 MutS family domain IV M2908_RS05235 PF13277 YmdB-like protein M2908_RS05240 PF00455 DeoR C terminal sensor domain M2908_RS05240 PF08220 DeoR-like helix-turn-helix domain M2908_RS05245 PF00294 pfkB family carbohydrate kinase M2908_RS05250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2908_RS05250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2908_RS05255 PF02423 Ornithine cyclodeaminase/mu-crystallin family M2908_RS05265 PF11495 Archaeal transcriptional regulator TrmB M2908_RS05265 PF01978 Sugar-specific transcriptional regulator TrmB M2908_RS05275 PF02245 Methylpurine-DNA glycosylase (MPG) M2908_RS05280 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M2908_RS05280 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M2908_RS05285 PF00581 Rhodanese-like domain M2908_RS05285 PF12368 Rhodanase C-terminal M2908_RS05285 PF17773 UPF0176 acylphosphatase like domain M2908_RS05305 PF00392 Bacterial regulatory proteins, gntR family M2908_RS05315 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain M2908_RS05315 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 M2908_RS05315 PF07748 Glycosyl hydrolases family 38 C-terminal domain M2908_RS05315 PF01074 Glycosyl hydrolases family 38 N-terminal domain M2908_RS05315 PF09261 Alpha mannosidase middle domain M2908_RS05320 PF00465 Iron-containing alcohol dehydrogenase M2908_RS05330 PF01370 NAD dependent epimerase/dehydratase family M2908_RS05335 PF00155 Aminotransferase class I and II M2908_RS05360 PF03611 PTS system sugar-specific permease component M2908_RS05365 PF08244 Glycosyl hydrolases family 32 C terminal M2908_RS05365 PF00251 Glycosyl hydrolases family 32 N-terminal domain M2908_RS05370 PF00367 phosphotransferase system, EIIB M2908_RS05370 PF02378 Phosphotransferase system, EIIC M2908_RS05375 PF00356 Bacterial regulatory proteins, lacI family M2908_RS05375 PF13407 Periplasmic binding protein domain M2908_RS05380 PF01613 Flavin reductase like domain M2908_RS05385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2908_RS05385 PF02378 Phosphotransferase system, EIIC M2908_RS05385 PF00367 phosphotransferase system, EIIB M2908_RS05390 PF00367 phosphotransferase system, EIIB M2908_RS05390 PF02378 Phosphotransferase system, EIIC M2908_RS05395 PF00860 Permease family M2908_RS05400 PF00156 Phosphoribosyl transferase domain M2908_RS05405 PF01638 HxlR-like helix-turn-helix M2908_RS05410 PF13460 NAD(P)H-binding M2908_RS05420 PF10396 GTP-binding protein TrmE N-terminus M2908_RS05420 PF12631 MnmE helical domain M2908_RS05420 PF01926 50S ribosome-binding GTPase M2908_RS05430 PF00923 Transaldolase/Fructose-6-phosphate aldolase M2908_RS05440 PF07663 Sorbitol phosphotransferase enzyme II C-terminus M2908_RS05440 PF03612 Sorbitol phosphotransferase enzyme II N-terminus M2908_RS05445 PF03608 PTS system enzyme II sorbitol-specific factor M2908_RS05455 PF05043 Mga helix-turn-helix domain M2908_RS05455 PF00874 PRD domain M2908_RS05455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M2908_RS05455 PF08279 HTH domain M2908_RS05460 PF00106 short chain dehydrogenase M2908_RS05465 PF03466 LysR substrate binding domain M2908_RS05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2908_RS05475 PF03649 Uncharacterised protein family (UPF0014) M2908_RS05480 PF00005 ABC transporter M2908_RS05490 PF00535 Glycosyl transferase family 2 M2908_RS05495 PF04138 GtrA-like protein M2908_RS05500 PF00149 Calcineurin-like phosphoesterase M2908_RS05500 PF02872 5'-nucleotidase, C-terminal domain M2908_RS05510 PF01979 Amidohydrolase family M2908_RS05515 PF00860 Permease family M2908_RS05530 PF00005 ABC transporter M2908_RS05530 PF12558 ATP-binding cassette cobalt transporter M2908_RS05535 PF07155 ECF-type riboflavin transporter, S component M2908_RS05570 PF03613 PTS system mannose/fructose/sorbose family IID component M2908_RS05575 PF03609 PTS system sorbose-specific iic component M2908_RS05580 PF03610 PTS system fructose IIA component M2908_RS05580 PF03830 PTS system sorbose subfamily IIB component M2908_RS05585 PF03610 PTS system fructose IIA component M2908_RS05585 PF03830 PTS system sorbose subfamily IIB component M2908_RS05590 PF03610 PTS system fructose IIA component M2908_RS05590 PF00874 PRD domain M2908_RS05590 PF00158 Sigma-54 interaction domain M2908_RS05595 PF07690 Major Facilitator Superfamily M2908_RS05600 PF02308 MgtC family M2908_RS05610 PF00232 Glycosyl hydrolase family 1 M2908_RS05615 PF03123 CAT RNA binding domain M2908_RS05615 PF00874 PRD domain M2908_RS05620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2908_RS05620 PF02378 Phosphotransferase system, EIIC M2908_RS05620 PF00367 phosphotransferase system, EIIB M2908_RS05630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2908_RS05640 PF02798 Glutathione S-transferase, N-terminal domain M2908_RS05650 PF01676 Metalloenzyme superfamily M2908_RS05655 PF01168 Alanine racemase, N-terminal domain M2908_RS05665 PF14503 YhfZ C-terminal domain M2908_RS05665 PF14502 Helix-turn-helix domain M2908_RS05670 PF00155 Aminotransferase class I and II M2908_RS05680 PF10797 Protein of unknown function M2908_RS05685 PF10941 Protein of unknown function DUF2620 M2908_RS05690 PF02590 Predicted SPOUT methyltransferase M2908_RS05695 PF13180 PDZ domain M2908_RS05700 PF00753 Metallo-beta-lactamase superfamily M2908_RS05715 PF13426 PAS domain M2908_RS05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS05715 PF00512 His Kinase A (phospho-acceptor) domain M2908_RS05715 PF00672 HAMP domain M2908_RS05720 PF00072 Response regulator receiver domain M2908_RS05720 PF00486 Transcriptional regulatory protein, C terminal M2908_RS05725 PF13538 UvrD-like helicase C-terminal domain M2908_RS05730 PF01380 SIS domain M2908_RS05730 PF01418 Helix-turn-helix domain, rpiR family M2908_RS05735 PF13419 Haloacid dehalogenase-like hydrolase M2908_RS05740 PF02378 Phosphotransferase system, EIIC M2908_RS05740 PF00367 phosphotransferase system, EIIB M2908_RS05745 PF13580 SIS domain M2908_RS05760 PF00313 'Cold-shock' DNA-binding domain M2908_RS05780 PF00013 KH domain M2908_RS05780 PF01966 HD domain M2908_RS05780 PF12072 Domain of unknown function (DUF3552) M2908_RS05785 PF00154 recA bacterial DNA recombination protein M2908_RS05790 PF02464 Competence-damaged protein M2908_RS05790 PF18146 Damage-inducible protein CinA KH domain M2908_RS05790 PF00994 Probable molybdopterin binding domain M2908_RS05795 PF01066 CDP-alcohol phosphatidyltransferase M2908_RS05800 PF13464 Domain of unknown function (DUF4115) M2908_RS05810 PF05193 Peptidase M16 inactive domain M2908_RS05810 PF00675 Insulinase (Peptidase family M16) M2908_RS05815 PF05193 Peptidase M16 inactive domain M2908_RS05820 PF01741 Large-conductance mechanosensitive channel, MscL M2908_RS05825 PF14572 Phosphoribosyl synthetase-associated domain M2908_RS05825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M2908_RS05830 PF00132 Bacterial transferase hexapeptide (six repeats) M2908_RS05830 PF00483 Nucleotidyl transferase M2908_RS05835 PF00156 Phosphoribosyl transferase domain M2908_RS05835 PF09182 Bacterial purine repressor, N-terminal M2908_RS05840 PF00950 ABC 3 transport family M2908_RS05845 PF00005 ABC transporter M2908_RS05850 PF00005 ABC transporter M2908_RS05855 PF00950 ABC 3 transport family M2908_RS05860 PF01297 Zinc-uptake complex component A periplasmic M2908_RS05870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M2908_RS05870 PF02378 Phosphotransferase system, EIIC M2908_RS05870 PF00367 phosphotransferase system, EIIB M2908_RS05875 PF00288 GHMP kinases N terminal domain M2908_RS05875 PF08544 GHMP kinases C terminal M2908_RS05880 PF13416 Bacterial extracellular solute-binding protein M2908_RS05885 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS05895 PF00005 ABC transporter M2908_RS05895 PF08402 TOBE domain M2908_RS05905 PF08240 Alcohol dehydrogenase GroES-like domain M2908_RS05905 PF00107 Zinc-binding dehydrogenase M2908_RS05910 PF01565 FAD binding domain M2908_RS05910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M2908_RS05915 PF03372 Endonuclease/Exonuclease/phosphatase family M2908_RS05920 PF11490 DNA polymerase III polC-type N-terminus II M2908_RS05920 PF07733 Bacterial DNA polymerase III alpha NTPase domain M2908_RS05920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M2908_RS05920 PF14579 Helix-hairpin-helix motif M2908_RS05920 PF02811 PHP domain M2908_RS05920 PF00929 Exonuclease M2908_RS05920 PF14480 DNA polymerase III polC-type N-terminus I M2908_RS05930 PF02872 5'-nucleotidase, C-terminal domain M2908_RS05930 PF17936 Bacterial Ig domain M2908_RS05930 PF00149 Calcineurin-like phosphoesterase M2908_RS05935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M2908_RS05940 PF01515 Phosphate acetyl/butaryl transferase M2908_RS05960 PF00348 Polyprenyl synthetase M2908_RS05970 PF00005 ABC transporter M2908_RS05970 PF00664 ABC transporter transmembrane region M2908_RS05975 PF00005 ABC transporter M2908_RS05975 PF00664 ABC transporter transmembrane region M2908_RS05980 PF02322 Cytochrome bd terminal oxidase subunit II M2908_RS05985 PF01654 Cytochrome bd terminal oxidase subunit I M2908_RS05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS05990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS06000 PF16325 Peptidase family U32 C-terminal domain M2908_RS06000 PF01136 Peptidase family U32 M2908_RS06010 PF00004 ATPase family associated with various cellular activities (AAA) M2908_RS06010 PF07724 AAA domain (Cdc48 subfamily) M2908_RS06010 PF17871 AAA lid domain M2908_RS06010 PF02861 Clp amino terminal domain, pathogenicity island component M2908_RS06010 PF10431 C-terminal, D2-small domain, of ClpB protein M2908_RS06015 PF05848 CtsR N-terminal HTH domain M2908_RS06015 PF17727 CtsR C-terminal dimerization domain M2908_RS06075 PF00300 Histidine phosphatase superfamily (branch 1) M2908_RS06080 PF00486 Transcriptional regulatory protein, C terminal M2908_RS06080 PF00072 Response regulator receiver domain M2908_RS06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS06085 PF00512 His Kinase A (phospho-acceptor) domain M2908_RS06090 PF07943 Penicillin-binding protein 5, C-terminal domain M2908_RS06090 PF00768 D-alanyl-D-alanine carboxypeptidase M2908_RS06095 PF02403 Seryl-tRNA synthetase N-terminal domain M2908_RS06095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2908_RS06100 PF00239 Resolvase, N terminal domain M2908_RS06100 PF02796 Helix-turn-helix domain of resolvase M2908_RS06145 PF00239 Resolvase, N terminal domain M2908_RS06145 PF02796 Helix-turn-helix domain of resolvase M2908_RS06150 PF00478 IMP dehydrogenase / GMP reductase domain M2908_RS06150 PF00571 CBS domain M2908_RS06160 PF01926 50S ribosome-binding GTPase M2908_RS06160 PF06071 Protein of unknown function (DUF933) M2908_RS06165 PF06107 Bacterial protein of unknown function (DUF951) M2908_RS06170 PF02195 ParB-like nuclease domain M2908_RS06170 PF17762 HTH domain found in ParB protein M2908_RS06175 PF13614 AAA domain M2908_RS06180 PF02527 rRNA small subunit methyltransferase G M2908_RS06195 PF01134 Glucose inhibited division protein A M2908_RS06195 PF13932 GidA associated domain M2908_RS06200 PF01926 50S ribosome-binding GTPase M2908_RS06200 PF12631 MnmE helical domain M2908_RS06200 PF10396 GTP-binding protein TrmE N-terminus M2908_RS06210 PF02096 60Kd inner membrane protein M2908_RS06215 PF00825 Ribonuclease P M2908_RS06220 PF00468 Ribosomal protein L34 M2908_RS06225 PF08299 Bacterial dnaA protein helix-turn-helix M2908_RS06225 PF00308 Bacterial dnaA protein M2908_RS06230 PF00712 DNA polymerase III beta subunit, N-terminal domain M2908_RS06230 PF02767 DNA polymerase III beta subunit, central domain M2908_RS06230 PF02768 DNA polymerase III beta subunit, C-terminal domain M2908_RS06235 PF00392 Bacterial regulatory proteins, gntR family M2908_RS06235 PF07702 UTRA domain M2908_RS06240 PF07470 Glycosyl Hydrolase Family 88 M2908_RS06250 PF03609 PTS system sorbose-specific iic component M2908_RS06255 PF03613 PTS system mannose/fructose/sorbose family IID component M2908_RS06270 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain M2908_RS06270 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain M2908_RS06270 PF02278 Polysaccharide lyase family 8, super-sandwich domain M2908_RS06275 PF00294 pfkB family carbohydrate kinase M2908_RS06280 PF01081 KDPG and KHG aldolase M2908_RS06285 PF09339 IclR helix-turn-helix domain M2908_RS06285 PF01614 Bacterial transcriptional regulator M2908_RS06290 PF04962 KduI/IolB family M2908_RS06315 PF02463 RecF/RecN/SMC N terminal domain M2908_RS06320 PF00204 DNA gyrase B M2908_RS06320 PF00986 DNA gyrase B subunit, carboxyl terminus M2908_RS06320 PF01751 Toprim domain M2908_RS06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS06325 PF03989 DNA gyrase C-terminal domain, beta-propeller M2908_RS06325 PF00521 DNA gyrase/topoisomerase IV, subunit A M2908_RS06330 PF01250 Ribosomal protein S6 M2908_RS06335 PF00436 Single-strand binding protein family M2908_RS06340 PF01084 Ribosomal protein S18 M2908_RS06345 PF03948 Ribosomal protein L9, C-terminal domain M2908_RS06345 PF01281 Ribosomal protein L9, N-terminal domain M2908_RS06350 PF03796 DnaB-like helicase C terminal domain M2908_RS06350 PF00772 DnaB-like helicase N terminal domain M2908_RS06360 PF00005 ABC transporter M2908_RS06360 PF12848 ABC transporter M2908_RS06365 PF00348 Polyprenyl synthetase M2908_RS06375 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS06380 PF04205 FMN-binding domain M2908_RS06385 PF02424 ApbE family M2908_RS06395 PF08279 HTH domain M2908_RS06395 PF03099 Biotin/lipoate A/B protein ligase family M2908_RS06395 PF02237 Biotin protein ligase C terminal domain M2908_RS06400 PF09383 NIL domain M2908_RS06400 PF00005 ABC transporter M2908_RS06405 PF02653 Branched-chain amino acid transport system / permease component M2908_RS06415 PF00356 Bacterial regulatory proteins, lacI family M2908_RS06420 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M2908_RS06420 PF02885 Glycosyl transferase family, helical bundle domain M2908_RS06420 PF00591 Glycosyl transferase family, a/b domain M2908_RS06425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M2908_RS06430 PF02608 ABC transporter substrate-binding protein PnrA-like M2908_RS06435 PF00005 ABC transporter M2908_RS06440 PF02653 Branched-chain amino acid transport system / permease component M2908_RS06445 PF02653 Branched-chain amino acid transport system / permease component M2908_RS06450 PF01676 Metalloenzyme superfamily M2908_RS06455 PF01048 Phosphorylase superfamily M2908_RS06460 PF01048 Phosphorylase superfamily M2908_RS06465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M2908_RS06470 PF00164 Ribosomal protein S12/S23 M2908_RS06475 PF00177 Ribosomal protein S7p/S5e M2908_RS06480 PF00009 Elongation factor Tu GTP binding domain M2908_RS06480 PF00679 Elongation factor G C-terminus M2908_RS06480 PF14492 Elongation Factor G, domain II M2908_RS06480 PF03764 Elongation factor G, domain IV M2908_RS06480 PF03144 Elongation factor Tu domain 2 M2908_RS06485 PF00009 Elongation factor Tu GTP binding domain M2908_RS06485 PF03144 Elongation factor Tu domain 2 M2908_RS06485 PF03143 Elongation factor Tu C-terminal domain M2908_RS06495 PF00338 Ribosomal protein S10p/S20e M2908_RS06500 PF00297 Ribosomal protein L3 M2908_RS06505 PF00573 Ribosomal protein L4/L1 family M2908_RS06510 PF00276 Ribosomal protein L23 M2908_RS06515 PF03947 Ribosomal Proteins L2, C-terminal domain M2908_RS06515 PF00181 Ribosomal Proteins L2, RNA binding domain M2908_RS06520 PF00203 Ribosomal protein S19 M2908_RS06525 PF00237 Ribosomal protein L22p/L17e M2908_RS06530 PF07650 KH domain M2908_RS06530 PF00189 Ribosomal protein S3, C-terminal domain M2908_RS06535 PF00252 Ribosomal protein L16p/L10e M2908_RS06540 PF00831 Ribosomal L29 protein M2908_RS06545 PF00366 Ribosomal protein S17 M2908_RS06550 PF00238 Ribosomal protein L14p/L23e M2908_RS06555 PF00467 KOW motif M2908_RS06555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M2908_RS06560 PF00673 ribosomal L5P family C-terminus M2908_RS06560 PF00281 Ribosomal protein L5 M2908_RS06565 PF00253 Ribosomal protein S14p/S29e M2908_RS06570 PF00410 Ribosomal protein S8 M2908_RS06575 PF00347 Ribosomal protein L6 M2908_RS06580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M2908_RS06585 PF03719 Ribosomal protein S5, C-terminal domain M2908_RS06585 PF00333 Ribosomal protein S5, N-terminal domain M2908_RS06590 PF00327 Ribosomal protein L30p/L7e M2908_RS06595 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M2908_RS06600 PF00344 SecY translocase M2908_RS06605 PF05191 Adenylate kinase, active site lid M2908_RS06610 PF01176 Translation initiation factor 1A / IF-1 M2908_RS06615 PF00444 Ribosomal protein L36 M2908_RS06620 PF00416 Ribosomal protein S13/S18 M2908_RS06625 PF00411 Ribosomal protein S11 M2908_RS06630 PF01000 RNA polymerase Rpb3/RpoA insert domain M2908_RS06630 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M2908_RS06630 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M2908_RS06635 PF01196 Ribosomal protein L17 M2908_RS06640 PF00005 ABC transporter M2908_RS06645 PF00005 ABC transporter M2908_RS06650 PF02361 Cobalt transport protein M2908_RS06655 PF01416 tRNA pseudouridine synthase M2908_RS06660 PF00572 Ribosomal protein L13 M2908_RS06665 PF00380 Ribosomal protein S9/S16 M2908_RS06675 PF12161 HsdM N-terminal domain M2908_RS06675 PF02384 N-6 DNA Methylase M2908_RS06680 PF12564 Type III restriction/modification enzyme methylation subunit M2908_RS06690 PF02086 D12 class N6 adenine-specific DNA methyltransferase M2908_RS06700 PF07728 AAA domain (dynein-related subfamily) M2908_RS06720 PF00589 Phage integrase family M2908_RS06720 PF02899 Phage integrase, N-terminal SAM-like domain M2908_RS06750 PF12161 HsdM N-terminal domain M2908_RS06750 PF02384 N-6 DNA Methylase M2908_RS06760 PF12008 Type I restriction and modification enzyme - subunit R C terminal M2908_RS06760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M2908_RS06760 PF18766 SWI2/SNF2 ATPase M2908_RS06785 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family M2908_RS06790 PF01207 Dihydrouridine synthase (Dus) M2908_RS06795 PF04892 VanZ like family M2908_RS06800 PF01268 Formate--tetrahydrofolate ligase M2908_RS06810 PF13538 UvrD-like helicase C-terminal domain M2908_RS06820 PF00817 impB/mucB/samB family M2908_RS06820 PF11799 impB/mucB/samB family C-terminal domain M2908_RS06820 PF11798 IMS family HHH motif M2908_RS06835 PF04002 RadC-like JAB domain M2908_RS06845 PF07690 Major Facilitator Superfamily M2908_RS06855 PF12848 ABC transporter M2908_RS06855 PF16326 ABC transporter C-terminal domain M2908_RS06855 PF00005 ABC transporter M2908_RS06865 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 M2908_RS06865 PF00703 Glycosyl hydrolases family 2 M2908_RS06865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain M2908_RS06865 PF02837 Glycosyl hydrolases family 2, sugar binding domain M2908_RS06870 PF00754 F5/8 type C domain M2908_RS06870 PF07555 beta-N-acetylglucosaminidase M2908_RS06870 PF02838 Glycosyl hydrolase family 20, domain 2 M2908_RS06870 PF00041 Fibronectin type III domain M2908_RS06870 PF00963 Cohesin domain M2908_RS06885 PF00583 Acetyltransferase (GNAT) family M2908_RS06890 PF00232 Glycosyl hydrolase family 1 M2908_RS06920 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS06925 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS06940 PF01238 Phosphomannose isomerase type I M2908_RS06945 PF00480 ROK family M2908_RS06955 PF00893 Small Multidrug Resistance protein M2908_RS06960 PF00893 Small Multidrug Resistance protein M2908_RS06965 PF09515 Thiamine transporter protein (Thia_YuaJ) M2908_RS06970 PF02535 ZIP Zinc transporter M2908_RS06980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS06980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2908_RS06995 PF03051 Peptidase C1-like family M2908_RS07005 PF00005 ABC transporter M2908_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS07020 PF02872 5'-nucleotidase, C-terminal domain M2908_RS07020 PF00149 Calcineurin-like phosphoesterase M2908_RS07025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS07025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS07030 PF00582 Universal stress protein family M2908_RS07045 PF16193 AAA C-terminal domain M2908_RS07045 PF12002 MgsA AAA+ ATPase C terminal M2908_RS07045 PF05496 Holliday junction DNA helicase RuvB P-loop domain M2908_RS07060 PF04452 RNA methyltransferase M2908_RS07070 PF00005 ABC transporter M2908_RS07085 PF13291 ACT domain M2908_RS07085 PF04607 Region found in RelA / SpoT proteins M2908_RS07085 PF02824 TGS domain M2908_RS07090 PF02580 D-Tyr-tRNA(Tyr) deacylase M2908_RS07095 PF01520 N-acetylmuramoyl-L-alanine amidase M2908_RS07095 PF08239 Bacterial SH3 domain M2908_RS07100 PF03129 Anticodon binding domain M2908_RS07100 PF13393 Histidyl-tRNA synthetase M2908_RS07105 PF02938 GAD domain M2908_RS07105 PF00152 tRNA synthetases class II (D, K and N) M2908_RS07105 PF01336 OB-fold nucleic acid binding domain M2908_RS07110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M2908_RS07110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M2908_RS07115 PF01546 Peptidase family M20/M25/M40 M2908_RS07125 PF02146 Sir2 family M2908_RS07130 PF01817 Chorismate mutase type II M2908_RS07130 PF00793 DAHP synthetase I family M2908_RS07135 PF13302 Acetyltransferase (GNAT) domain M2908_RS07140 PF06335 Protein of unknown function (DUF1054) M2908_RS07150 PF05343 M42 glutamyl aminopeptidase M2908_RS07155 PF14667 Polysaccharide biosynthesis C-terminal domain M2908_RS07155 PF01943 Polysaccharide biosynthesis protein M2908_RS07160 PF00849 RNA pseudouridylate synthase M2908_RS07160 PF01479 S4 domain M2908_RS07165 PF00581 Rhodanese-like domain M2908_RS07170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS07170 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS07175 PF02583 Metal-sensitive transcriptional repressor M2908_RS07180 PF00692 dUTPase M2908_RS07185 PF18073 Rubredoxin metal binding domain M2908_RS07195 PF00749 tRNA synthetases class I (E and Q), catalytic domain M2908_RS07200 PF00132 Bacterial transferase hexapeptide (six repeats) M2908_RS07200 PF06426 Serine acetyltransferase, N-terminal M2908_RS07205 PF01406 tRNA synthetases class I (C) catalytic domain M2908_RS07205 PF09190 DALR domain M2908_RS07210 PF00636 Ribonuclease III domain M2908_RS07215 PF00588 SpoU rRNA Methylase family M2908_RS07215 PF08032 RNA 2'-O ribose methyltransferase substrate binding M2908_RS07220 PF05991 YacP-like NYN domain M2908_RS07225 PF03601 Conserved hypothetical protein 698 M2908_RS07230 PF01709 Transcriptional regulator M2908_RS07235 PF00437 Type II/IV secretion system protein M2908_RS07240 PF00482 Type II secretion system (T2SS), protein F M2908_RS07245 PF02796 Helix-turn-helix domain of resolvase M2908_RS07245 PF00239 Resolvase, N terminal domain M2908_RS07260 PF00717 Peptidase S24-like M2908_RS07260 PF01726 LexA DNA binding domain M2908_RS07300 PF01695 IstB-like ATP binding protein M2908_RS07360 PF00436 Single-strand binding protein family M2908_RS07390 PF03496 ADP-ribosyltransferase exoenzyme M2908_RS07390 PF04233 Phage Mu protein F like protein M2908_RS07495 PF00689 Cation transporting ATPase, C-terminus M2908_RS07495 PF00690 Cation transporter/ATPase, N-terminus M2908_RS07505 PF08331 Domain of unknown function (DUF1730) M2908_RS07510 PF00485 Phosphoribulokinase / Uridine kinase family M2908_RS07520 PF00860 Permease family M2908_RS07530 PF08439 Oligopeptidase F M2908_RS07530 PF01432 Peptidase family M3 M2908_RS07535 PF08240 Alcohol dehydrogenase GroES-like domain M2908_RS07535 PF00107 Zinc-binding dehydrogenase M2908_RS07540 PF02525 Flavodoxin-like fold M2908_RS07550 PF00132 Bacterial transferase hexapeptide (six repeats) M2908_RS07555 PF03167 Uracil DNA glycosylase superfamily M2908_RS07560 PF00707 Translation initiation factor IF-3, C-terminal domain M2908_RS07560 PF05198 Translation initiation factor IF-3, N-terminal domain M2908_RS07565 PF01632 Ribosomal protein L35 M2908_RS07570 PF00453 Ribosomal protein L20 M2908_RS07575 PF13597 Anaerobic ribonucleoside-triphosphate reductase M2908_RS07575 PF03477 ATP cone domain M2908_RS07585 PF05343 M42 glutamyl aminopeptidase M2908_RS07590 PF12706 Beta-lactamase superfamily domain M2908_RS07595 PF10437 Bacterial lipoate protein ligase C-terminus M2908_RS07595 PF03099 Biotin/lipoate A/B protein ligase family M2908_RS07600 PF00579 tRNA synthetases class I (W and Y) M2908_RS07605 PF03960 ArsC family M2908_RS07610 PF05389 Negative regulator of genetic competence (MecA) M2908_RS07615 PF12822 ECF transporter, substrate-specific component M2908_RS07620 PF02441 Flavoprotein M2908_RS07625 PF04127 DNA / pantothenate metabolism flavoprotein M2908_RS07625 PF02441 Flavoprotein M2908_RS07635 PF00268 Ribonucleotide reductase, small chain M2908_RS07640 PF02867 Ribonucleotide reductase, barrel domain M2908_RS07640 PF00317 Ribonucleotide reductase, all-alpha domain M2908_RS07640 PF08343 Ribonucleotide reductase N-terminal M2908_RS07645 PF07972 NrdI Flavodoxin like M2908_RS07650 PF00462 Glutaredoxin M2908_RS07660 PF01195 Peptidyl-tRNA hydrolase M2908_RS07665 PF00270 DEAD/DEAH box helicase M2908_RS07665 PF02559 CarD-like/TRCF domain M2908_RS07665 PF00271 Helicase conserved C-terminal domain M2908_RS07665 PF17757 UvrB interaction domain M2908_RS07665 PF03461 TRCF domain M2908_RS07670 PF01943 Polysaccharide biosynthesis protein M2908_RS07670 PF14667 Polysaccharide biosynthesis C-terminal domain M2908_RS07675 PF01479 S4 domain M2908_RS07685 PF00575 S1 RNA binding domain M2908_RS07690 PF01171 PP-loop family M2908_RS07690 PF11734 TilS substrate C-terminal domain M2908_RS07695 PF00156 Phosphoribosyl transferase domain M2908_RS07700 PF00004 ATPase family associated with various cellular activities (AAA) M2908_RS07700 PF06480 FtsH Extracellular M2908_RS07700 PF01434 Peptidase family M41 M2908_RS07700 PF17862 AAA+ lid domain M2908_RS07705 PF01430 Hsp33 protein M2908_RS07710 PF01207 Dihydrouridine synthase (Dus) M2908_RS07715 PF00152 tRNA synthetases class II (D, K and N) M2908_RS07715 PF01336 OB-fold nucleic acid binding domain M2908_RS07860 PF00817 impB/mucB/samB family M2908_RS07860 PF11799 impB/mucB/samB family C-terminal domain M2908_RS07870 PF00753 Metallo-beta-lactamase superfamily M2908_RS07875 PF01906 Putative heavy-metal-binding M2908_RS07880 PF02687 FtsX-like permease family M2908_RS07885 PF00005 ABC transporter M2908_RS07890 PF00108 Thiolase, N-terminal domain M2908_RS07890 PF02803 Thiolase, C-terminal domain M2908_RS07895 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M2908_RS07895 PF01266 FAD dependent oxidoreductase M2908_RS07900 PF00230 Major intrinsic protein M2908_RS07905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M2908_RS07905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M2908_RS07910 PF00578 AhpC/TSA family M2908_RS07915 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS07915 PF13192 Thioredoxin domain M2908_RS07920 PF04198 Putative sugar-binding domain M2908_RS07925 PF01791 DeoC/LacD family aldolase M2908_RS07930 PF05857 TraX protein M2908_RS07935 PF00293 NUDIX domain M2908_RS07945 PF14278 Transcriptional regulator C-terminal region M2908_RS07945 PF00440 Bacterial regulatory proteins, tetR family M2908_RS07950 PF02733 Dak1 domain M2908_RS07955 PF00465 Iron-containing alcohol dehydrogenase M2908_RS07960 PF03610 PTS system fructose IIA component M2908_RS07965 PF02734 DAK2 domain M2908_RS07970 PF02733 Dak1 domain M2908_RS07975 PF03606 C4-dicarboxylate anaerobic carrier M2908_RS07980 PF02082 Transcriptional regulator M2908_RS08005 PF01541 GIY-YIG catalytic domain M2908_RS08010 PF05175 Methyltransferase small domain M2908_RS08015 PF01553 Acyltransferase M2908_RS08020 PF00176 SNF2 family N-terminal domain M2908_RS08020 PF00271 Helicase conserved C-terminal domain M2908_RS08020 PF12419 SNF2 Helicase protein M2908_RS08025 PF00664 ABC transporter transmembrane region M2908_RS08025 PF00005 ABC transporter M2908_RS08030 PF00753 Metallo-beta-lactamase superfamily M2908_RS08030 PF17770 Ribonuclease J C-terminal domain M2908_RS08030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2908_RS08035 PF07690 Major Facilitator Superfamily M2908_RS08040 PF03061 Thioesterase superfamily M2908_RS08040 PF00571 CBS domain M2908_RS08040 PF07085 DRTGG domain M2908_RS08040 PF00392 Bacterial regulatory proteins, gntR family M2908_RS08045 PF02272 DHHA1 domain M2908_RS08045 PF01368 DHH family M2908_RS08055 PF00356 Bacterial regulatory proteins, lacI family M2908_RS08060 PF00005 ABC transporter M2908_RS08060 PF16326 ABC transporter C-terminal domain M2908_RS08060 PF12848 ABC transporter M2908_RS08065 PF02629 CoA binding domain M2908_RS08065 PF06971 Putative DNA-binding protein N-terminus M2908_RS08070 PF00166 Chaperonin 10 Kd subunit M2908_RS08075 PF00118 TCP-1/cpn60 chaperonin family M2908_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M2908_RS08080 PF06580 Histidine kinase M2908_RS08085 PF12833 Helix-turn-helix domain M2908_RS08085 PF00072 Response regulator receiver domain M2908_RS08095 PF08402 TOBE domain M2908_RS08095 PF00005 ABC transporter M2908_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS08105 PF00962 Adenosine/AMP deaminase M2908_RS08110 PF00248 Aldo/keto reductase family M2908_RS08115 PF00367 phosphotransferase system, EIIB M2908_RS08115 PF02378 Phosphotransferase system, EIIC M2908_RS08120 PF10397 Adenylosuccinate lyase C-terminus M2908_RS08120 PF00206 Lyase M2908_RS08125 PF00390 Malic enzyme, N-terminal domain M2908_RS08125 PF03949 Malic enzyme, NAD binding domain M2908_RS08130 PF10415 Fumarase C C-terminus M2908_RS08130 PF00206 Lyase M2908_RS08135 PF01380 SIS domain M2908_RS08135 PF01418 Helix-turn-helix domain, rpiR family M2908_RS08140 PF02872 5'-nucleotidase, C-terminal domain M2908_RS08140 PF00149 Calcineurin-like phosphoesterase M2908_RS08150 PF12833 Helix-turn-helix domain M2908_RS08150 PF02311 AraC-like ligand binding domain M2908_RS08155 PF00485 Phosphoribulokinase / Uridine kinase family M2908_RS08155 PF16875 Glycosyl hydrolase family 36 N-terminal domain M2908_RS08155 PF16874 Glycosyl hydrolase family 36 C-terminal domain M2908_RS08160 PF01327 Polypeptide deformylase M2908_RS08165 PF00312 Ribosomal protein S15 M2908_RS08170 PF00013 KH domain M2908_RS08170 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M2908_RS08170 PF01138 3' exoribonuclease family, domain 1 M2908_RS08170 PF03725 3' exoribonuclease family, domain 2 M2908_RS08170 PF00575 S1 RNA binding domain M2908_RS08175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M2908_RS08175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M2908_RS08175 PF03129 Anticodon binding domain M2908_RS08175 PF02824 TGS domain M2908_RS08180 PF03717 Penicillin-binding Protein dimerisation domain M2908_RS08180 PF00905 Penicillin binding protein transpeptidase domain M2908_RS08185 PF00471 Ribosomal protein L33 M2908_RS08195 PF01694 Rhomboid family M2908_RS08200 PF00480 ROK family M2908_RS08205 PF00581 Rhodanese-like domain M2908_RS08210 PF00753 Metallo-beta-lactamase superfamily M2908_RS08210 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M2908_RS08210 PF17770 Ribonuclease J C-terminal domain M2908_RS08215 PF07288 Protein of unknown function (DUF1447) M2908_RS08220 PF00664 ABC transporter transmembrane region M2908_RS08220 PF00005 ABC transporter M2908_RS08225 PF00005 ABC transporter M2908_RS08225 PF00664 ABC transporter transmembrane region M2908_RS08235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M2908_RS08235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M2908_RS08240 PF00270 DEAD/DEAH box helicase M2908_RS08240 PF00271 Helicase conserved C-terminal domain M2908_RS08245 PF00158 Sigma-54 interaction domain M2908_RS08245 PF00874 PRD domain M2908_RS08245 PF03610 PTS system fructose IIA component M2908_RS08250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M2908_RS08255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M2908_RS08260 PF02378 Phosphotransferase system, EIIC M2908_RS08285 PF02073 Thermophilic metalloprotease (M29) M2908_RS08295 PF00258 Flavodoxin M2908_RS08300 PF00557 Metallopeptidase family M24 M2908_RS08305 PF03631 Virulence factor BrkB M2908_RS08310 PF00953 Glycosyl transferase family 4 M2908_RS08315 PF03816 Cell envelope-related transcriptional attenuator domain M2908_RS08320 PF00005 ABC transporter M2908_RS08325 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2908_RS08330 PF03808 Glycosyl transferase WecB/TagA/CpsF family M2908_RS08335 PF01061 ABC-2 type transporter M2908_RS08340 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2908_RS08345 PF01467 Cytidylyltransferase-like M2908_RS08350 PF00535 Glycosyl transferase family 2 M2908_RS08350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2908_RS08355 PF01467 Cytidylyltransferase-like M2908_RS08360 PF00535 Glycosyl transferase family 2 M2908_RS08360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M2908_RS08390 PF13807 G-rich domain on putative tyrosine kinase M2908_RS08390 PF02706 Chain length determinant protein M2908_RS08395 PF13614 AAA domain M2908_RS08405 PF02719 Polysaccharide biosynthesis protein M2908_RS08410 PF02397 Bacterial sugar transferase M2908_RS08425 PF08485 Polysaccharide biosynthesis protein C-terminal M2908_RS08425 PF02719 Polysaccharide biosynthesis protein M2908_RS08430 PF01370 NAD dependent epimerase/dehydratase family M2908_RS08435 PF02350 UDP-N-acetylglucosamine 2-epimerase M2908_RS08455 PF01501 Glycosyl transferase family 8 M2908_RS08455 PF08437 Glycosyl transferase family 8 C-terminal M2908_RS08470 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M2908_RS08470 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M2908_RS08475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M2908_RS08475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M2908_RS08475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M2908_RS08480 PF03816 Cell envelope-related transcriptional attenuator domain M2908_RS08485 PF00483 Nucleotidyl transferase M2908_RS08495 PF02350 UDP-N-acetylglucosamine 2-epimerase M2908_RS08500 PF01370 NAD dependent epimerase/dehydratase family M2908_RS08525 PF02631 RecX family M2908_RS08530 PF00730 HhH-GPD superfamily base excision DNA repair protein M2908_RS08530 PF14815 NUDIX domain M2908_RS08535 PF03706 Lysylphosphatidylglycerol synthase TM region M2908_RS08535 PF09924 Uncharacterised conserved protein (DUF2156) M2908_RS08555 PF04203 Sortase domain M2908_RS08575 PF04167 Protein of unknown function (DUF402) M2908_RS08595 PF01594 AI-2E family transporter M2908_RS08600 PF01595 Cyclin M transmembrane N-terminal domain M2908_RS08600 PF03471 Transporter associated domain M2908_RS08600 PF00571 CBS domain M2908_RS08610 PF17802 Prealbumin-like fold domain M2908_RS08610 PF05737 Collagen binding domain M2908_RS08610 PF05738 Cna protein B-type domain M2908_RS08615 PF00356 Bacterial regulatory proteins, lacI family M2908_RS08620 PF00294 pfkB family carbohydrate kinase M2908_RS08625 PF05025 RbsD / FucU transport protein family M2908_RS08630 PF00005 ABC transporter M2908_RS08635 PF02653 Branched-chain amino acid transport system / permease component M2908_RS08640 PF13407 Periplasmic binding protein domain M2908_RS08645 PF00313 'Cold-shock' DNA-binding domain M2908_RS08655 PF12704 MacB-like periplasmic core domain M2908_RS08655 PF02687 FtsX-like permease family M2908_RS08655 PF00005 ABC transporter M2908_RS08660 PF02687 FtsX-like permease family M2908_RS08660 PF12704 MacB-like periplasmic core domain M2908_RS08660 PF00005 ABC transporter M2908_RS08665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2908_RS08665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2908_RS08665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2908_RS08665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2908_RS08670 PF01022 Bacterial regulatory protein, arsR family M2908_RS08675 PF03144 Elongation factor Tu domain 2 M2908_RS08675 PF16658 Class II release factor RF3, C-terminal domain M2908_RS08675 PF00009 Elongation factor Tu GTP binding domain M2908_RS08685 PF01928 CYTH domain M2908_RS08690 PF04607 Region found in RelA / SpoT proteins M2908_RS08695 PF01513 ATP-NAD kinase M2908_RS08700 PF00849 RNA pseudouridylate synthase M2908_RS08705 PF00571 CBS domain M2908_RS08705 PF01769 Divalent cation transporter M2908_RS08705 PF03448 MgtE intracellular N domain M2908_RS08710 PF03932 CutC family M2908_RS08715 PF08241 Methyltransferase domain M2908_RS08720 PF00588 SpoU rRNA Methylase family M2908_RS08725 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M2908_RS08725 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M2908_RS08725 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M2908_RS08730 PF02540 NAD synthase M2908_RS08735 PF00884 Sulfatase M2908_RS08740 PF01425 Amidase M2908_RS08745 PF00497 Bacterial extracellular solute-binding proteins, family 3 M2908_RS08750 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS08760 PF00884 Sulfatase M2908_RS08765 PF17785 PUA-like domain M2908_RS08765 PF10672 S-adenosylmethionine-dependent methyltransferase M2908_RS08770 PF01487 Type I 3-dehydroquinase M2908_RS08775 PF04073 Aminoacyl-tRNA editing domain M2908_RS08780 PF01546 Peptidase family M20/M25/M40 M2908_RS08780 PF07687 Peptidase dimerisation domain M2908_RS08785 PF07690 Major Facilitator Superfamily M2908_RS08790 PF12833 Helix-turn-helix domain M2908_RS08805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M2908_RS08805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M2908_RS08810 PF00342 Phosphoglucose isomerase M2908_RS08820 PF17763 Glutaminase/Asparaginase C-terminal domain M2908_RS08820 PF00710 Asparaginase, N-terminal M2908_RS08825 PF01904 Protein of unknown function DUF72 M2908_RS08835 PF06160 Septation ring formation regulator, EzrA M2908_RS08840 PF00266 Aminotransferase class-V M2908_RS08845 PF02926 THUMP domain M2908_RS08845 PF02568 Thiamine biosynthesis protein (ThiI) M2908_RS08850 PF06971 Putative DNA-binding protein N-terminus M2908_RS08850 PF02629 CoA binding domain M2908_RS08855 PF08534 Redoxin M2908_RS08860 PF10458 Valyl tRNA synthetase tRNA binding arm M2908_RS08860 PF00133 tRNA synthetases class I (I, L, M and V) M2908_RS08860 PF08264 Anticodon-binding domain of tRNA M2908_RS08865 PF08245 Mur ligase middle domain M2908_RS08865 PF02875 Mur ligase family, glutamate ligase domain M2908_RS08870 PF13419 Haloacid dehalogenase-like hydrolase M2908_RS08875 PF04002 RadC-like JAB domain M2908_RS08880 PF00313 'Cold-shock' DNA-binding domain M2908_RS08890 PF03009 Glycerophosphoryl diester phosphodiesterase family M2908_RS08900 PF01926 50S ribosome-binding GTPase M2908_RS08900 PF13167 GTP-binding GTPase N-terminal M2908_RS08900 PF16360 GTP-binding GTPase Middle Region M2908_RS08905 PF06838 Methionine gamma-lyase M2908_RS08915 PF17871 AAA lid domain M2908_RS08915 PF07724 AAA domain (Cdc48 subfamily) M2908_RS08915 PF00004 ATPase family associated with various cellular activities (AAA) M2908_RS08915 PF10431 C-terminal, D2-small domain, of ClpB protein M2908_RS08925 PF00381 PTS HPr component phosphorylation site M2908_RS08930 PF00391 PEP-utilising enzyme, mobile domain M2908_RS08930 PF02896 PEP-utilising enzyme, TIM barrel domain M2908_RS08930 PF05524 PEP-utilising enzyme, N-terminal M2908_RS08935 PF00534 Glycosyl transferases group 1 M2908_RS08935 PF13439 Glycosyltransferase Family 4 M2908_RS08940 PF00534 Glycosyl transferases group 1 M2908_RS08940 PF13439 Glycosyltransferase Family 4 M2908_RS08950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M2908_RS08950 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M2908_RS08955 PF07702 UTRA domain M2908_RS08955 PF00392 Bacterial regulatory proteins, gntR family M2908_RS08960 PF01380 SIS domain M2908_RS08965 PF01791 DeoC/LacD family aldolase M2908_RS08970 PF00294 pfkB family carbohydrate kinase M2908_RS08975 PF03830 PTS system sorbose subfamily IIB component M2908_RS08980 PF03609 PTS system sorbose-specific iic component M2908_RS08985 PF03613 PTS system mannose/fructose/sorbose family IID component M2908_RS08990 PF03610 PTS system fructose IIA component M2908_RS08995 PF01301 Glycosyl hydrolases family 35 M2908_RS09000 PF08796 Protein of unknown function (DUF1797) M2908_RS09005 PF01343 Peptidase family S49 M2908_RS09010 PF06271 RDD family M2908_RS09020 PF05697 Bacterial trigger factor protein (TF) M2908_RS09020 PF05698 Bacterial trigger factor protein (TF) C-terminus M2908_RS09020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M2908_RS09025 PF06689 ClpX C4-type zinc finger M2908_RS09025 PF10431 C-terminal, D2-small domain, of ClpB protein M2908_RS09025 PF07724 AAA domain (Cdc48 subfamily) M2908_RS09030 PF02110 Hydroxyethylthiazole kinase family M2908_RS09035 PF08543 Phosphomethylpyrimidine kinase M2908_RS09040 PF02581 Thiamine monophosphate synthase M2908_RS09050 PF00005 ABC transporter M2908_RS09055 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09060 PF09084 NMT1/THI5 like M2908_RS09065 PF03070 TENA/THI-4/PQQC family M2908_RS09070 PF09383 NIL domain M2908_RS09070 PF00005 ABC transporter M2908_RS09075 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09080 PF03180 NLPA lipoprotein M2908_RS09085 PF01226 Formate/nitrite transporter M2908_RS09090 PF00890 FAD binding domain M2908_RS09090 PF14537 Cytochrome c3 M2908_RS09095 PF00589 Phage integrase family M2908_RS09095 PF02920 DNA binding domain of tn916 integrase M2908_RS09100 PF09035 Excisionase from transposon Tn916 M2908_RS09130 PF00679 Elongation factor G C-terminus M2908_RS09130 PF03764 Elongation factor G, domain IV M2908_RS09130 PF00009 Elongation factor Tu GTP binding domain M2908_RS09130 PF14492 Elongation Factor G, domain II M2908_RS09145 PF00877 NlpC/P60 family M2908_RS09175 PF02486 Replication initiation factor M2908_RS09175 PF18106 Rolling Circle replication initiation protein N-terminal domain M2908_RS09200 PF07408 Protein of unknown function (DUF1507) M2908_RS09205 PF01098 Cell cycle protein M2908_RS09210 PF02785 Biotin carboxylase C-terminal domain M2908_RS09210 PF00289 Biotin carboxylase, N-terminal domain M2908_RS09210 PF00364 Biotin-requiring enzyme M2908_RS09210 PF00682 HMGL-like M2908_RS09210 PF02436 Conserved carboxylase domain M2908_RS09210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M2908_RS09225 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M2908_RS09235 PF01467 Cytidylyltransferase-like M2908_RS09240 PF13180 PDZ domain M2908_RS09240 PF05362 Lon protease (S16) C-terminal proteolytic domain M2908_RS09245 PF13538 UvrD-like helicase C-terminal domain M2908_RS09245 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M2908_RS09245 PF14490 Helix-hairpin-helix containing domain M2908_RS09250 PF00781 Diacylglycerol kinase catalytic domain M2908_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M2908_RS09255 PF03466 LysR substrate binding domain M2908_RS09260 PF04143 Sulphur transport M2908_RS09265 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS09265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M2908_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M2908_RS09280 PF00005 ABC transporter M2908_RS09290 PF06177 QueT transporter M2908_RS09295 PF05746 DALR anticodon binding domain M2908_RS09295 PF00750 tRNA synthetases class I (R) M2908_RS09295 PF03485 Arginyl tRNA synthetase N terminal domain M2908_RS09300 PF01316 Arginine repressor, DNA binding domain M2908_RS09300 PF02863 Arginine repressor, C-terminal domain M2908_RS09305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M2908_RS09305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M2908_RS09305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M2908_RS09305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M2908_RS09310 PF00849 RNA pseudouridylate synthase M2908_RS09310 PF01479 S4 domain M2908_RS09315 PF00905 Penicillin binding protein transpeptidase domain M2908_RS09315 PF00912 Transglycosylase M2908_RS09320 PF06133 Control of competence regulator ComK, YlbF/YmcA M2908_RS09325 PF01966 HD domain M2908_RS09330 PF13145 PPIC-type PPIASE domain M2908_RS09340 PF01230 HIT domain M2908_RS09345 PF00005 ABC transporter M2908_RS09355 PF01636 Phosphotransferase enzyme family M2908_RS09360 PF02390 Putative methyltransferase M2908_RS09365 PF02378 Phosphotransferase system, EIIC M2908_RS09370 PF01380 SIS domain M2908_RS09375 PF02056 Family 4 glycosyl hydrolase M2908_RS09375 PF11975 Family 4 glycosyl hydrolase C-terminal domain M2908_RS09385 PF05343 M42 glutamyl aminopeptidase M2908_RS09390 PF00085 Thioredoxin M2908_RS09395 PF00582 Universal stress protein family M2908_RS09400 PF01588 Putative tRNA binding domain M2908_RS09400 PF14794 Domain of unknown function (DUF4479) M2908_RS09405 PF06135 IreB regulatory phosphoprotein M2908_RS09410 PF03652 Holliday junction resolvase M2908_RS09415 PF06949 Protein of unknown function (DUF1292) M2908_RS09430 PF11798 IMS family HHH motif M2908_RS09430 PF00817 impB/mucB/samB family M2908_RS09430 PF11799 impB/mucB/samB family C-terminal domain M2908_RS09440 PF06486 Protein of unknown function (DUF1093) M2908_RS09445 PF11858 Domain of unknown function (DUF3378) M2908_RS09445 PF01351 Ribonuclease HII M2908_RS09450 PF05164 Cell division protein ZapA M2908_RS09460 PF01713 Smr domain M2908_RS09460 PF00488 MutS domain V M2908_RS09465 PF00085 Thioredoxin M2908_RS09470 PF00210 Ferritin-like domain M2908_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09490 PF12911 N-terminal TM domain of oligopeptide transport permease C M2908_RS09495 PF00005 ABC transporter M2908_RS09495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS09500 PF00005 ABC transporter M2908_RS09500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M2908_RS09505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M2908_RS09520 PF13350 Tyrosine phosphatase family M2908_RS09530 PF06265 Protein of unknown function (DUF1027) M2908_RS09535 PF13344 Haloacid dehalogenase-like hydrolase M2908_RS09545 PF04608 Phosphatidylglycerophosphatase A M2908_RS09550 PF07992 Pyridine nucleotide-disulphide oxidoreductase M2908_RS09555 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M2908_RS09560 PF00575 S1 RNA binding domain M2908_RS09605 PF04226 Transglycosylase associated protein M2908_RS09625 PF00586 AIR synthase related protein, N-terminal domain M2908_RS09625 PF02769 AIR synthase related protein, C-terminal domain M2908_RS09635 PF00009 Elongation factor Tu GTP binding domain M2908_RS09635 PF03144 Elongation factor Tu domain 2 M2908_RS09635 PF09106 Elongation factor SelB, winged helix M2908_RS09635 PF09107 Elongation factor SelB, winged helix M2908_RS09640 PF03841 L-seryl-tRNA selenium transferase M2908_RS09645 PF03840 Preprotein translocase SecG subunit M2908_RS09650 PF12146 Serine aminopeptidase, S33 M2908_RS09655 PF17876 Cold shock domain M2908_RS09655 PF08206 Ribonuclease B OB domain M2908_RS09655 PF00773 RNB domain M2908_RS09655 PF00575 S1 RNA binding domain M2908_RS09660 PF01668 SmpB protein M2908_RS09665 PF00119 ATP synthase A chain M2908_RS09670 PF00137 ATP synthase subunit C M2908_RS09675 PF00430 ATP synthase B/B' CF(0) M2908_RS09680 PF00213 ATP synthase delta (OSCP) subunit M2908_RS09685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2908_RS09685 PF00306 ATP synthase alpha/beta chain, C terminal domain M2908_RS09685 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2908_RS09690 PF00231 ATP synthase M2908_RS09695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M2908_RS09695 PF02874 ATP synthase alpha/beta family, beta-barrel domain M2908_RS09700 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M2908_RS09700 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M2908_RS09710 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M2908_RS09720 PF01809 Putative membrane protein insertion efficiency factor M2908_RS09730 PF13458 Periplasmic binding protein M2908_RS09735 PF02653 Branched-chain amino acid transport system / permease component M2908_RS09740 PF11862 Domain of unknown function (DUF3382) M2908_RS09740 PF02653 Branched-chain amino acid transport system / permease component M2908_RS09745 PF00005 ABC transporter M2908_RS09745 PF12399 Branched-chain amino acid ATP-binding cassette transporter M2908_RS09750 PF00005 ABC transporter M2908_RS09755 PF00571 CBS domain M2908_RS09785 PF07475 HPr Serine kinase C-terminal domain M2908_RS09785 PF02603 HPr Serine kinase N terminus M2908_RS09790 PF01790 Prolipoprotein diacylglyceryl transferase M2908_RS09795 PF13419 Haloacid dehalogenase-like hydrolase M2908_RS09800 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M2908_RS09800 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M2908_RS09810 PF00717 Peptidase S24-like M2908_RS09810 PF01726 LexA DNA binding domain M2908_RS09815 PF05979 Bacterial protein of unknown function (DUF896) M2908_RS09820 PF02779 Transketolase, pyrimidine binding domain M2908_RS09820 PF02780 Transketolase, C-terminal domain M2908_RS09820 PF00456 Transketolase, thiamine diphosphate binding domain M2908_RS09825 PF10502 Signal peptidase, peptidase S26 M2908_RS09830 PF12705 PD-(D/E)XK nuclease superfamily M2908_RS09835 PF12705 PD-(D/E)XK nuclease superfamily M2908_RS09835 PF00580 UvrD/REP helicase N-terminal domain M2908_RS09835 PF13361 UvrD-like helicase C-terminal domain M2908_RS09840 PF00392 Bacterial regulatory proteins, gntR family M2908_RS09840 PF07702 UTRA domain M2908_RS09845 PF01205 Uncharacterized protein family UPF0029 M2908_RS09845 PF09186 Domain of unknown function (DUF1949) M2908_RS09855 PF12146 Serine aminopeptidase, S33 M2908_RS09860 PF04851 Type III restriction enzyme, res subunit M2908_RS09860 PF00271 Helicase conserved C-terminal domain M2908_RS09870 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M2908_RS09870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M2908_RS09875 PF02810 SEC-C motif M2908_RS09875 PF07517 SecA DEAD-like domain M2908_RS09875 PF01043 SecA preprotein cross-linking domain M2908_RS09875 PF07516 SecA Wing and Scaffold domain M2908_RS09885 PF00005 ABC transporter M2908_RS09890 PF02687 FtsX-like permease family M2908_RS09890 PF18075 FtsX extracellular domain M2908_RS09895 PF12849 PBP superfamily domain M2908_RS09900 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09905 PF00528 Binding-protein-dependent transport system inner membrane component M2908_RS09910 PF00005 ABC transporter M2908_RS09915 PF00005 ABC transporter M2908_RS09920 PF01895 PhoU domain M2908_RS09970 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M2908_RS09975 PF05670 NFACT protein RNA binding domain M2908_RS09990 PF02653 Branched-chain amino acid transport system / permease component M2908_RS09995 PF00005 ABC transporter M2908_RS10000 PF03618 Kinase/pyrophosphorylase M2908_RS10005 PF01475 Ferric uptake regulator family M2908_RS10010 PF01165 Ribosomal protein S21 M2908_RS10015 PF09424 Yqey-like protein M2908_RS10025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M2908_RS10040 PF03099 Biotin/lipoate A/B protein ligase family M2908_RS10050 PF05066 HB1, ASXL, restriction endonuclease HTH domain M2908_RS10065 PF00005 ABC transporter M2908_RS10080 PF01145 SPFH domain / Band 7 family M2908_RS10080 PF15975 Flotillin