locus-tag	class	description
GOQ09_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOQ09_RS00030	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GOQ09_RS00030	COG2885	chlorophyll binding
GOQ09_RS00055	COG1408	metallophosphoesterase
GOQ09_RS00065	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
GOQ09_RS00070	COG0392	lysyltransferase activity
GOQ09_RS00075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS00080	COG3568	Endonuclease Exonuclease Phosphatase
GOQ09_RS00110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOQ09_RS00130	COG4452	Inner membrane protein CreD
GOQ09_RS00145	COG2205	protein histidine kinase activity
GOQ09_RS00150	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS00165	COG2608	mercury ion transmembrane transporter activity
GOQ09_RS00170	COG2217	Heavy metal translocating P-type atpase
GOQ09_RS00175	COG0456	acetyltransferase
GOQ09_RS00180	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_RS00185	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_RS00195	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS00210	COG1902	pentaerythritol trinitrate reductase activity
GOQ09_RS00220	COG1024	Enoyl-CoA hydratase
GOQ09_RS00240	COG0445	tRNA wobble uridine modification
GOQ09_RS00245	COG0357	Ribosomal RNA small subunit methyltransferase G
GOQ09_RS00255	COG1192	Involved in chromosome partitioning
GOQ09_RS00265	COG1475	DNA binding
GOQ09_RS00275	COG0277	FAD linked oxidase domain protein
GOQ09_RS00285	COG2096	Adenosyltransferase
GOQ09_RS00320	COG0583	DNA-binding transcription factor activity
GOQ09_RS00335	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
GOQ09_RS00340	COG2894	cell division
GOQ09_RS00345	COG0850	regulation of cytokinetic process
GOQ09_RS00350	COG2233	PERMEase
GOQ09_RS00355	COG2050	protein possibly involved in aromatic compounds catabolism
GOQ09_RS00365	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GOQ09_RS00375	COG0477	Major facilitator Superfamily
GOQ09_RS00390	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS00400	COG3246	L-lysine catabolic process to acetate
GOQ09_RS00410	COG1942	4-Oxalocrotonate Tautomerase
GOQ09_RS00415	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS00460	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_RS00480	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GOQ09_RS00525	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_RS00540	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_RS00545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS00550	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS00555	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS00555	COG1116	anion transmembrane transporter activity
GOQ09_RS00570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_RS00575	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
GOQ09_RS00585	COG1950	PFAM Membrane protein of
GOQ09_RS00590	COG0583	DNA-binding transcription factor activity
GOQ09_RS00595	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS00600	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS00630	COG1573	uracil-dna glycosylase
GOQ09_RS00645	COG0583	DNA-binding transcription factor activity
GOQ09_RS00650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_RS00660	COG2066	Belongs to the glutaminase family
GOQ09_RS00670	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_RS00690	COG0183	Belongs to the thiolase family
GOQ09_RS00700	COG0700	Nucleoside recognition
GOQ09_RS00705	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS00725	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
GOQ09_RS00730	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_RS00735	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_RS00760	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS00765	COG1116	anion transmembrane transporter activity
GOQ09_RS00775	COG2986	histidine ammonia-lyase
GOQ09_RS00780	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
GOQ09_RS00790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS00795	COG0765	amino acid transport
GOQ09_RS00805	COG1228	amidohydrolase
GOQ09_RS00810	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_RS00830	COG0583	DNA-binding transcription factor activity
GOQ09_RS00840	COG0646	methionine synthase
GOQ09_RS00840	COG1410	methionine synthase
GOQ09_RS00865	COG1309	transcriptional regulator
GOQ09_RS00905	COG0411	ABC transporter
GOQ09_RS00915	COG1335	isochorismatase
GOQ09_RS00925	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_RS00930	COG2010	Cytochrome c
GOQ09_RS00930	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_RS00935	COG0596	Alpha beta hydrolase
GOQ09_RS00945	COG2207	Transcriptional regulator
GOQ09_RS00950	COG0583	DNA-binding transcription factor activity
GOQ09_RS00960	COG1228	amidohydrolase
GOQ09_RS00965	COG1335	isochorismatase
GOQ09_RS00990	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_RS01120	COG0515	serine threonine protein kinase
GOQ09_RS01120	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_RS01140	COG0347	Belongs to the P(II) protein family
GOQ09_RS01145	COG0004	ammonium transporteR
GOQ09_RS01155	COG0583	DNA-binding transcription factor activity
GOQ09_RS01160	COG0277	FAD linked oxidase domain protein
GOQ09_RS01165	COG0277	FAD linked oxidase domain protein
GOQ09_RS01170	COG0247	lactate metabolic process
GOQ09_RS01180	COG0386	Belongs to the glutathione peroxidase family
GOQ09_RS01190	COG0477	Major facilitator Superfamily
GOQ09_RS01195	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GOQ09_RS01210	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_RS01225	COG0129	dihydroxy-acid dehydratase activity
GOQ09_RS01235	COG3971	2-oxopent-4-enoate hydratase activity
GOQ09_RS01255	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS01275	COG1846	Transcriptional regulator
GOQ09_RS01295	COG2974	May be involved in recombination
GOQ09_RS01325	COG0579	oxidoreductase
GOQ09_RS01340	COG2211	Major facilitator Superfamily
GOQ09_RS01355	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS01360	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS01385	COG1079	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS01390	COG1335	isochorismatase
GOQ09_RS01395	COG3845	ABC transporter
GOQ09_RS01410	COG0708	Exodeoxyribonuclease III
GOQ09_RS01415	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GOQ09_RS01425	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOQ09_RS01430	COG0154	amidase activity
GOQ09_RS01435	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOQ09_RS01440	COG1077	Cell shape determining protein MreB Mrl
GOQ09_RS01455	COG0768	penicillin binding
GOQ09_RS01460	COG0179	Fumarylacetoacetate (FAA) hydrolase
GOQ09_RS01465	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
GOQ09_RS01475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS01490	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GOQ09_RS01510	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOQ09_RS01515	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GOQ09_RS01520	COG0583	DNA-binding transcription factor activity
GOQ09_RS01535	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS01550	COG1177	transmembrane transport
GOQ09_RS01555	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_RS01560	COG3842	ATPase activity
GOQ09_RS01575	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS01585	COG0436	Aminotransferase
GOQ09_RS01590	COG0028	Belongs to the TPP enzyme family
GOQ09_RS01620	COG0724	RNA recognition motif
GOQ09_RS01630	COG0023	Translation Initiation Factor
GOQ09_RS01635	COG0513	Belongs to the DEAD box helicase family
GOQ09_RS01640	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS01645	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS01660	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_RS01675	COG2877	3-deoxy-8-phosphooctulonate synthase activity
GOQ09_RS01830	COG3708	Transcriptional regulator
GOQ09_RS01830	COG2207	Transcriptional regulator
GOQ09_RS01840	COG2733	membrane
GOQ09_RS01845	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_RS01850	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_RS01855	COG1473	amidohydrolase
GOQ09_RS01870	COG0243	molybdopterin cofactor binding
GOQ09_RS01885	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS01890	COG1070	Carbohydrate kinase
GOQ09_RS01895	COG1063	alcohol dehydrogenase
GOQ09_RS01900	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS01910	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_RS01915	COG2207	Transcriptional regulator
GOQ09_RS01920	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS01965	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS01975	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS01980	COG0446	pyridine nucleotide-disulphide oxidoreductase
GOQ09_RS01985	COG1946	Acyl-CoA thioesterase
GOQ09_RS01990	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS01995	COG0659	secondary active sulfate transmembrane transporter activity
GOQ09_RS02040	COG0667	Aldo Keto reductase
GOQ09_RS02045	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS02065	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
GOQ09_RS02070	COG2188	Transcriptional regulator
GOQ09_RS02100	COG0629	single-stranded DNA binding
GOQ09_RS02130	COG4585	Histidine kinase
GOQ09_RS02135	COG0217	transcriptional regulatory protein
GOQ09_RS02150	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOQ09_RS02155	COG0482	sulfurtransferase activity
GOQ09_RS02190	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS02195	COG0601	transmembrane transport
GOQ09_RS02200	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS02205	COG0444	Belongs to the ABC transporter superfamily
GOQ09_RS02210	COG4608	Belongs to the ABC transporter superfamily
GOQ09_RS02215	COG0747	negative chemotaxis
GOQ09_RS02220	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_RS02225	COG0598	Magnesium transport protein CorA
GOQ09_RS02235	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GOQ09_RS02245	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GOQ09_RS02250	COG0735	belongs to the Fur family
GOQ09_RS02255	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_RS02260	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
GOQ09_RS02275	COG0058	SHG alpha-glucan phosphorylase activity
GOQ09_RS02280	COG0297	glycogen (starch) synthase activity
GOQ09_RS02285	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GOQ09_RS02290	COG1523	belongs to the glycosyl hydrolase 13 family
GOQ09_RS02295	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_RS02300	COG0366	Alpha amylase catalytic
GOQ09_RS02305	COG2072	flavoprotein involved in K transport
GOQ09_RS02330	COG0495	leucyl-tRNA aminoacylation
GOQ09_RS02345	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GOQ09_RS02355	COG3158	transport of potassium into the cell
GOQ09_RS02370	COG3135	benzoate transporter
GOQ09_RS02375	COG0189	ligase activity
GOQ09_RS02390	COG0121	glutamine amidotransferase
GOQ09_RS02400	COG2814	Major facilitator Superfamily
GOQ09_RS02415	COG0205	6-phosphofructokinase activity
GOQ09_RS02425	COG1024	Enoyl-CoA hydratase
GOQ09_RS02430	COG0183	Belongs to the thiolase family
GOQ09_RS02440	COG0583	DNA-binding transcription factor activity
GOQ09_RS02445	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
GOQ09_RS02465	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
GOQ09_RS02475	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_RS02480	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS02505	COG0018	arginyl-trna synthetase
GOQ09_RS02520	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
GOQ09_RS02525	COG1137	ATPase activity
GOQ09_RS02530	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GOQ09_RS02560	COG0069	glutamate synthase activity
GOQ09_RS02565	COG0653	protein targeting
GOQ09_RS02585	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
GOQ09_RS02595	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS02605	COG0583	DNA-binding transcription factor activity
GOQ09_RS02625	COG1335	isochorismatase
GOQ09_RS02635	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
GOQ09_RS02645	COG2967	ApaG domain
GOQ09_RS02650	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GOQ09_RS02705	COG5002	protein histidine kinase activity
GOQ09_RS02715	COG2205	protein histidine kinase activity
GOQ09_RS02715	COG2198	Histidine kinase
GOQ09_RS02715	COG0784	Response regulator, receiver
GOQ09_RS02720	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_RS02725	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_RS02750	COG0515	serine threonine protein kinase
GOQ09_RS02960	COG0546	phosphoglycolate phosphatase activity
GOQ09_RS02980	COG0512	Glutamine amidotransferase of anthranilate synthase
GOQ09_RS02995	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GOQ09_RS03000	COG0134	indole-3-glycerol-phosphate synthase activity
GOQ09_RS03005	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GOQ09_RS03025	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOQ09_RS03045	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GOQ09_RS03050	COG0081	regulation of translation
GOQ09_RS03055	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GOQ09_RS03060	COG0222	ribosome binding
GOQ09_RS03065	COG0085	RNA polymerase activity
GOQ09_RS03070	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOQ09_RS03090	COG5000	phosphorelay sensor kinase activity
GOQ09_RS03095	COG2204	response regulator
GOQ09_RS03110	COG0251	oxidation-reduction process
GOQ09_RS03120	COG1846	Transcriptional regulator
GOQ09_RS03140	COG2853	Lipoprotein
GOQ09_RS03160	COG5002	protein histidine kinase activity
GOQ09_RS03165	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS03175	COG0840	transmembrane signaling receptor activity
GOQ09_RS03195	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS03210	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
GOQ09_RS03240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS03255	COG0459	protein refolding
GOQ09_RS03260	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOQ09_RS03270	COG0438	transferase activity, transferring glycosyl groups
GOQ09_RS03295	COG1271	oxidase subunit
GOQ09_RS03300	COG1294	oxidase, subunit
GOQ09_RS03320	COG0154	amidase activity
GOQ09_RS03335	COG0776	regulation of translation
GOQ09_RS03340	COG0583	DNA-binding transcription factor activity
GOQ09_RS03355	COG5002	protein histidine kinase activity
GOQ09_RS03355	COG5001	Diguanylate cyclase
GOQ09_RS03355	COG3447	MASE1 domain protein
GOQ09_RS03360	COG2205	protein histidine kinase activity
GOQ09_RS03380	COG0210	DNA helicase
GOQ09_RS03385	COG0679	Auxin Efflux Carrier
GOQ09_RS03400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GOQ09_RS03405	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
GOQ09_RS03415	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GOQ09_RS03420	COG4232	protein-disulfide reductase activity
GOQ09_RS03450	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS03460	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_RS03475	COG0384	phenazine biosynthesis protein PhzF
GOQ09_RS03480	COG0625	glutathione transferase activity
GOQ09_RS03485	COG1280	lysine exporter protein (LysE YggA)
GOQ09_RS03495	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS03500	COG0697	spore germination
GOQ09_RS03525	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS03595	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
GOQ09_RS03600	COG1045	serine acetyltransferase
GOQ09_RS03610	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
GOQ09_RS03630	COG0662	Cupin 2, conserved barrel domain protein
GOQ09_RS03630	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
GOQ09_RS03635	COG0438	transferase activity, transferring glycosyl groups
GOQ09_RS03635	COG1216	Glycosyl transferase, family 2
GOQ09_RS03640	COG1215	transferase activity, transferring glycosyl groups
GOQ09_RS03655	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GOQ09_RS03665	COG1309	transcriptional regulator
GOQ09_RS03670	COG0753	catalase activity
GOQ09_RS03690	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
GOQ09_RS03695	COG2721	sulfolactate sulfo-lyase activity
GOQ09_RS03700	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS03710	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS03715	COG2186	Transcriptional regulator
GOQ09_RS03720	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS03725	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS03730	COG0179	Fumarylacetoacetate (FAA) hydrolase
GOQ09_RS03735	COG0583	DNA-binding transcription factor activity
GOQ09_RS03740	COG4221	oxidoreductase activity
GOQ09_RS03750	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS03760	COG1024	Enoyl-CoA hydratase
GOQ09_RS03760	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS03765	COG2852	Protein conserved in bacteria
GOQ09_RS03770	COG0183	Belongs to the thiolase family
GOQ09_RS03795	COG1024	Enoyl-CoA hydratase
GOQ09_RS03805	COG5265	(ABC) transporter
GOQ09_RS03810	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOQ09_RS03815	COG0154	amidase activity
GOQ09_RS03820	COG0583	DNA-binding transcription factor activity
GOQ09_RS03825	COG1027	Aspartate ammonia-lyase
GOQ09_RS03835	COG0765	amino acid transport
GOQ09_RS03840	COG0765	amino acid transport
GOQ09_RS03845	COG1126	abc transporter atp-binding protein
GOQ09_RS03855	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS03860	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS03860	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_RS03865	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_RS03875	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS03885	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS03890	COG1024	Enoyl-CoA hydratase
GOQ09_RS03895	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS03900	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS03905	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS03905	COG1024	Enoyl-CoA hydratase
GOQ09_RS03910	COG0583	DNA-binding transcription factor activity
GOQ09_RS03925	COG1573	uracil-dna glycosylase
GOQ09_RS03935	COG0154	amidase activity
GOQ09_RS03945	COG4608	Belongs to the ABC transporter superfamily
GOQ09_RS03950	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS03960	COG0747	negative chemotaxis
GOQ09_RS03965	COG0418	dihydroorotase activity
GOQ09_RS03980	COG0501	Belongs to the peptidase M48B family
GOQ09_RS03995	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
GOQ09_RS04000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_RS04005	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
GOQ09_RS04025	COG1187	pseudouridine synthase activity
GOQ09_RS04030	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOQ09_RS04045	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GOQ09_RS04050	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_RS04080	COG2318	DinB family
GOQ09_RS04145	COG2814	Major facilitator Superfamily
GOQ09_RS04155	COG2207	Transcriptional regulator
GOQ09_RS04155	COG0662	Cupin 2, conserved barrel domain protein
GOQ09_RS04180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOQ09_RS04230	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
GOQ09_RS04255	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GOQ09_RS04275	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
GOQ09_RS04280	COG0523	cobalamin synthesis protein
GOQ09_RS04305	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GOQ09_RS04310	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GOQ09_RS04315	COG2001	Belongs to the MraZ family
GOQ09_RS04320	COG0275	rRNA processing
GOQ09_RS04325	COG3116	cell division
GOQ09_RS04335	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_RS04340	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GOQ09_RS04345	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GOQ09_RS04350	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GOQ09_RS04355	COG0772	Belongs to the SEDS family
GOQ09_RS04360	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOQ09_RS04365	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GOQ09_RS04370	COG1181	Belongs to the D-alanine--D-alanine ligase family
GOQ09_RS04375	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
GOQ09_RS04390	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GOQ09_RS04395	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GOQ09_RS04400	COG0575	Belongs to the CDS family
GOQ09_RS04415	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOQ09_RS04420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_RS04435	COG3150	esterase
GOQ09_RS04440	COG2197	response regulator
GOQ09_RS04450	COG0772	Belongs to the SEDS family
GOQ09_RS04455	COG0312	modulator of DNA gyrase
GOQ09_RS04465	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GOQ09_RS04475	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
GOQ09_RS04490	COG0511	ligase activity, forming carbon-carbon bonds
GOQ09_RS04495	COG0439	Biotin carboxylase
GOQ09_RS04500	COG2264	protein methyltransferase activity
GOQ09_RS04510	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOQ09_RS04520	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOQ09_RS04555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOQ09_RS04560	COG2943	transferase activity, transferring hexosyl groups
GOQ09_RS04570	COG2204	response regulator
GOQ09_RS04580	COG2205	protein histidine kinase activity
GOQ09_RS04585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOQ09_RS04600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_RS04615	COG0037	tRNA processing
GOQ09_RS04625	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS04635	COG2175	clavaminate synthase activity
GOQ09_RS04670	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
GOQ09_RS04675	COG3387	PFAM Glycoside hydrolase 15-related
GOQ09_RS04685	COG0617	tRNA 3'-terminal CCA addition
GOQ09_RS04695	COG0625	glutathione transferase activity
GOQ09_RS04700	COG1285	pathogenesis
GOQ09_RS04705	COG0741	lytic transglycosylase activity
GOQ09_RS04710	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GOQ09_RS04715	COG0583	DNA-binding transcription factor activity
GOQ09_RS04730	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_RS04740	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOQ09_RS04745	COG1522	sequence-specific DNA binding
GOQ09_RS04780	COG0366	Alpha amylase catalytic
GOQ09_RS04785	COG0454	-acetyltransferase
GOQ09_RS04785	COG0456	acetyltransferase
GOQ09_RS04845	COG0583	DNA-binding transcription factor activity
GOQ09_RS04850	COG1741	Belongs to the pirin family
GOQ09_RS04855	COG1335	isochorismatase
GOQ09_RS04865	COG1574	metal-dependent hydrolase with the TIM-barrel fold
GOQ09_RS04900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS04920	COG2197	response regulator
GOQ09_RS04980	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_RS04985	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
GOQ09_RS04990	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_RS04995	COG2207	Transcriptional regulator
GOQ09_RS05010	COG0583	DNA-binding transcription factor activity
GOQ09_RS05015	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS05020	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_RS05035	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS05040	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS05045	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GOQ09_RS05050	COG3842	ATPase activity
GOQ09_RS05060	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_RS05075	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS05085	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS05105	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_RS05115	COG2814	Major facilitator Superfamily
GOQ09_RS05120	COG0501	Belongs to the peptidase M48B family
GOQ09_RS05135	COG2155	Conserved Protein
GOQ09_RS05140	COG0596	Alpha beta hydrolase
GOQ09_RS05170	COG1506	peptidase
GOQ09_RS05170	COG0823	Involved in the tonB-independent uptake of proteins
GOQ09_RS05170	COG4946	Tricorn protease homolog
GOQ09_RS05180	COG3546	catalase activity
GOQ09_RS05185	COG3634	alkyl hydroperoxide reductase activity
GOQ09_RS05200	COG1132	(ABC) transporter
GOQ09_RS05210	COG0514	ATP-dependent DNA helicase (RecQ)
GOQ09_RS05215	COG2951	lytic endotransglycosylase activity
GOQ09_RS05250	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_RS05255	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS05265	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS05270	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_RS05275	COG4213	ABC transporter substrate-binding protein
GOQ09_RS05285	COG4214	carbohydrate transport
GOQ09_RS05290	COG1129	ABC transporter
GOQ09_RS05295	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS05300	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS05330	COG0189	ligase activity
GOQ09_RS05330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_RS05335	COG0189	ligase activity
GOQ09_RS05335	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOQ09_RS05340	COG1132	(ABC) transporter
GOQ09_RS05350	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
GOQ09_RS05355	COG4178	(ABC) transporter
GOQ09_RS05365	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_RS05370	COG3842	ATPase activity
GOQ09_RS05380	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_RS05380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS05385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_RS05390	COG2271	Major facilitator Superfamily
GOQ09_RS05475	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_RS05490	COG1765	OsmC-like protein
GOQ09_RS05495	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
GOQ09_RS05510	COG1473	amidohydrolase
GOQ09_RS05515	COG4166	transmembrane transport
GOQ09_RS05520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS05525	COG0444	Belongs to the ABC transporter superfamily
GOQ09_RS05530	COG4608	Belongs to the ABC transporter superfamily
GOQ09_RS05535	COG3384	dioxygenase
GOQ09_RS05540	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GOQ09_RS05545	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_RS05555	COG3842	ATPase activity
GOQ09_RS05570	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GOQ09_RS05575	COG0166	Belongs to the GPI family
GOQ09_RS05600	COG1175	transmembrane transport
GOQ09_RS05605	COG0395	ABC-type sugar transport system, permease component
GOQ09_RS05610	COG3842	ATPase activity
GOQ09_RS05615	COG0246	Mannitol dehydrogenase
GOQ09_RS05625	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GOQ09_RS05635	COG4753	response regulator
GOQ09_RS05635	COG2207	Transcriptional regulator
GOQ09_RS05640	COG1070	Carbohydrate kinase
GOQ09_RS05645	COG0459	protein refolding
GOQ09_RS05650	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOQ09_RS05670	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS05675	COG4774	siderophore transport
GOQ09_RS05695	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GOQ09_RS05705	COG1560	Kdo2-lipid A biosynthetic process
GOQ09_RS05715	COG0218	Necessary for normal cell division and for the maintenance of normal septation
GOQ09_RS05725	COG1333	cytochrome c biogenesis protein
GOQ09_RS05730	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
GOQ09_RS05735	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
GOQ09_RS05740	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
GOQ09_RS05745	COG0019	diaminopimelate decarboxylase activity
GOQ09_RS05755	COG1965	Belongs to the frataxin family
GOQ09_RS05790	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GOQ09_RS05795	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GOQ09_RS05800	COG0232	Belongs to the dGTPase family. Type 2 subfamily
GOQ09_RS05825	COG0069	glutamate synthase activity
GOQ09_RS05825	COG0067	glutamate synthase
GOQ09_RS05825	COG0070	glutamate synthase
GOQ09_RS05835	COG1127	ABC transporter
GOQ09_RS05840	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
GOQ09_RS05845	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GOQ09_RS05850	COG2853	Lipoprotein
GOQ09_RS05865	COG1131	(ABC) transporter
GOQ09_RS05870	COG0842	Transport permease protein
GOQ09_RS05875	COG5007	Belongs to the BolA IbaG family
GOQ09_RS05880	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOQ09_RS05885	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
GOQ09_RS05910	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_RS05915	COG0131	Imidazoleglycerol-phosphate dehydratase
GOQ09_RS05925	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GOQ09_RS05930	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GOQ09_RS05940	COG1301	dicarboxylic acid transport
GOQ09_RS05950	COG0107	imidazoleglycerol-phosphate synthase activity
GOQ09_RS05955	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GOQ09_RS05960	COG0140	phosphoribosyl-ATP diphosphatase activity
GOQ09_RS05970	COG0537	adenosine 5'-monophosphoramidase activity
GOQ09_RS05975	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GOQ09_RS05980	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
GOQ09_RS05985	COG0805	protein transport
GOQ09_RS06000	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GOQ09_RS06005	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
GOQ09_RS06010	COG1970	mechanosensitive ion channel activity
GOQ09_RS06020	COG1596	polysaccharide export
GOQ09_RS06060	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_RS06075	COG0723	plastoquinol--plastocyanin reductase activity
GOQ09_RS06080	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
GOQ09_RS06085	COG2857	Cytochrome c1
GOQ09_RS06090	COG0625	glutathione transferase activity
GOQ09_RS06095	COG2969	positive regulation of protein catabolic process
GOQ09_RS06110	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS06115	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
GOQ09_RS06125	COG4591	ABC-type transport system involved in lipoprotein release permease component
GOQ09_RS06130	COG1136	(ABC) transporter
GOQ09_RS06135	COG0740	serine-type endopeptidase activity
GOQ09_RS06150	COG0601	transmembrane transport
GOQ09_RS06180	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
GOQ09_RS06185	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS06220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
GOQ09_RS06235	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS06240	COG2030	dehydratase
GOQ09_RS06240	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS06265	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOQ09_RS06270	COG2151	metal-sulfur cluster biosynthetic enzyme
GOQ09_RS06275	COG3396	Phenylacetate-CoA oxygenase
GOQ09_RS06280	COG3460	Phenylacetate-CoA oxygenase
GOQ09_RS06285	COG3396	Phenylacetate-CoA oxygenase
GOQ09_RS06295	COG2050	protein possibly involved in aromatic compounds catabolism
GOQ09_RS06300	COG1024	Enoyl-CoA hydratase
GOQ09_RS06310	COG1309	transcriptional regulator
GOQ09_RS06315	COG0300	oxidoreductase activity
GOQ09_RS06325	COG2304	oxidoreductase activity
GOQ09_RS06335	COG0714	Associated with various cellular activities
GOQ09_RS06340	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_RS06345	COG0084	hydrolase, TatD family'
GOQ09_RS06360	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GOQ09_RS06365	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GOQ09_RS06380	COG0583	DNA-binding transcription factor activity
GOQ09_RS06400	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS06420	COG1283	sodium-dependent phosphate transmembrane transporter activity
GOQ09_RS06425	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOQ09_RS06430	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GOQ09_RS06450	COG1609	Transcriptional regulator
GOQ09_RS06455	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GOQ09_RS06465	COG0196	riboflavin kinase activity
GOQ09_RS06485	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS06490	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS06495	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GOQ09_RS06515	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GOQ09_RS06515	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOQ09_RS06525	COG0267	Belongs to the bacterial ribosomal protein bL33 family
GOQ09_RS06530	COG0227	Belongs to the bacterial ribosomal protein bL28 family
GOQ09_RS06535	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_RS06545	COG1674	ftsk spoiiie
GOQ09_RS06550	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
GOQ09_RS06555	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
GOQ09_RS06560	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS06585	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
GOQ09_RS06585	COG0543	2 iron, 2 sulfur cluster binding
GOQ09_RS06605	COG2816	NAD+ diphosphatase activity
GOQ09_RS06610	COG0425	Belongs to the sulfur carrier protein TusA family
GOQ09_RS06620	COG0525	valine-tRNA ligase activity
GOQ09_RS06625	COG3022	response to hydroperoxide
GOQ09_RS06640	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GOQ09_RS06640	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
GOQ09_RS06645	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS06660	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS06665	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS06675	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS06710	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GOQ09_RS06730	COG0477	Major facilitator Superfamily
GOQ09_RS06745	COG1304	FMN binding
GOQ09_RS06750	COG0583	DNA-binding transcription factor activity
GOQ09_RS06765	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
GOQ09_RS06770	COG4221	oxidoreductase activity
GOQ09_RS06805	COG2831	hemolysin activation secretion protein
GOQ09_RS06825	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS06835	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS06840	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GOQ09_RS06860	COG2807	transmembrane transport
GOQ09_RS06865	COG2186	Transcriptional regulator
GOQ09_RS06870	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
GOQ09_RS06875	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
GOQ09_RS06885	COG1280	lysine exporter protein (LysE YggA)
GOQ09_RS06905	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
GOQ09_RS06915	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GOQ09_RS06920	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
GOQ09_RS06945	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
GOQ09_RS06985	COG0165	Argininosuccinate lyase
GOQ09_RS06990	COG3275	phosphorelay sensor kinase activity
GOQ09_RS07000	COG0628	permease
GOQ09_RS07015	COG0583	DNA-binding transcription factor activity
GOQ09_RS07020	COG2814	Major facilitator Superfamily
GOQ09_RS07030	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GOQ09_RS07035	COG0181	hydroxymethylbilane synthase activity
GOQ09_RS07055	COG1530	ribonuclease E activity
GOQ09_RS07075	COG0616	signal peptide processing
GOQ09_RS07075	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GOQ09_RS07080	COG2223	nitrite transmembrane transporter activity
GOQ09_RS07085	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOQ09_RS07090	COG0424	maF-like protein
GOQ09_RS07095	COG1399	metal-binding, possibly nucleic acid-binding protein
GOQ09_RS07100	COG0333	Belongs to the bacterial ribosomal protein bL32 family
GOQ09_RS07105	COG0416	fatty acid biosynthetic process
GOQ09_RS07110	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOQ09_RS07115	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
GOQ09_RS07120	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS07125	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_RS07130	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_RS07155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_RS07160	COG0481	GTPase activity
GOQ09_RS07165	COG0681	Belongs to the peptidase S26 family
GOQ09_RS07175	COG0571	ribonuclease III activity
GOQ09_RS07180	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOQ09_RS07185	COG1381	Involved in DNA repair and RecF pathway recombination
GOQ09_RS07190	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
GOQ09_RS07195	COG0736	holo-[acyl-carrier-protein] synthase activity
GOQ09_RS07200	COG1472	Belongs to the glycosyl hydrolase 3 family
GOQ09_RS07205	COG1451	nucleotide metabolic process
GOQ09_RS07210	COG0443	Heat shock 70 kDa protein
GOQ09_RS07215	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
GOQ09_RS07225	COG0762	integral membrane protein
GOQ09_RS07230	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GOQ09_RS07235	COG0159	tryptophan synthase activity
GOQ09_RS07240	COG0133	tryptophan synthase activity
GOQ09_RS07245	COG0135	phosphoribosylanthranilate isomerase activity
GOQ09_RS07250	COG0101	tRNA pseudouridine synthase activity
GOQ09_RS07260	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GOQ09_RS07265	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_RS07270	COG0066	3-isopropylmalate dehydratase activity
GOQ09_RS07275	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GOQ09_RS07290	COG0372	Belongs to the citrate synthase family
GOQ09_RS07295	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
GOQ09_RS07300	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
GOQ09_RS07305	COG1053	succinate dehydrogenase
GOQ09_RS07320	COG2188	Transcriptional regulator
GOQ09_RS07325	COG0039	L-malate dehydrogenase activity
GOQ09_RS07330	COG4106	trans-aconitate 2-methyltransferase activity
GOQ09_RS07360	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GOQ09_RS07395	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS07405	COG3483	tryptophan 2,3-dioxygenase activity
GOQ09_RS07420	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_RS07430	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GOQ09_RS07435	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
GOQ09_RS07445	COG0268	Binds directly to 16S ribosomal RNA
GOQ09_RS07450	COG0728	peptidoglycan biosynthetic process
GOQ09_RS07465	COG3795	YCII-related domain
GOQ09_RS07470	COG3795	YCII-related domain
GOQ09_RS07475	COG4941	Belongs to the sigma-70 factor family
GOQ09_RS07480	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_RS07480	COG4977	sequence-specific DNA binding
GOQ09_RS07500	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
GOQ09_RS07505	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOQ09_RS07510	COG0617	tRNA 3'-terminal CCA addition
GOQ09_RS07520	COG1392	Phosphate transport regulator
GOQ09_RS07525	COG0306	phosphate transporter
GOQ09_RS07540	COG0228	four-way junction DNA binding
GOQ09_RS07545	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GOQ09_RS07550	COG0336	Belongs to the RNA methyltransferase TrmD family
GOQ09_RS07555	COG0335	large ribosomal subunit rRNA binding
GOQ09_RS07565	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
GOQ09_RS07570	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_RS07580	COG1162	GTPase activity
GOQ09_RS07585	COG2154	pterin-4-alpha-carbinolamine dehydratase
GOQ09_RS07590	COG0501	Belongs to the peptidase M48B family
GOQ09_RS07595	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
GOQ09_RS07600	COG0513	Belongs to the DEAD box helicase family
GOQ09_RS07605	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GOQ09_RS07610	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS07615	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_RS07620	COG0604	alcohol dehydrogenase
GOQ09_RS07645	COG4638	Rieske (2fe-2S)
GOQ09_RS07660	COG0183	Belongs to the thiolase family
GOQ09_RS07670	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
GOQ09_RS07685	COG0683	leucine binding
GOQ09_RS07690	COG4638	Rieske (2fe-2S)
GOQ09_RS07695	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOQ09_RS07720	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS07760	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_RS07770	COG0840	transmembrane signaling receptor activity
GOQ09_RS07780	COG4221	oxidoreductase activity
GOQ09_RS07795	COG4964	Belongs to the GSP D family
GOQ09_RS07855	COG2197	response regulator
GOQ09_RS07875	COG0516	GMP reductase activity
GOQ09_RS07880	COG0210	DNA helicase
GOQ09_RS07900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GOQ09_RS07915	COG0477	Major facilitator Superfamily
GOQ09_RS07920	COG0583	DNA-binding transcription factor activity
GOQ09_RS07935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS07940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS07950	COG0412	Dienelactone hydrolase
GOQ09_RS08010	COG1722	exodeoxyribonuclease VII activity
GOQ09_RS08015	COG0142	geranyltranstransferase activity
GOQ09_RS08020	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GOQ09_RS08025	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
GOQ09_RS08030	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS08040	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOQ09_RS08045	COG0477	Major facilitator Superfamily
GOQ09_RS08050	COG1910	domain protein
GOQ09_RS08075	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS08110	COG1122	ATPase activity
GOQ09_RS08160	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
GOQ09_RS08160	COG3608	succinylglutamate desuccinylase aspartoacylase
GOQ09_RS08165	COG1320	monovalent cation:proton antiporter activity
GOQ09_RS08170	COG2212	antiporter activity
GOQ09_RS08180	COG0651	ATP synthesis coupled electron transport
GOQ09_RS08185	COG1006	Multisubunit Na H antiporter MnhC subunit
GOQ09_RS08190	COG2111	Na H antiporter
GOQ09_RS08190	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
GOQ09_RS08195	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOQ09_RS08210	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS08220	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
GOQ09_RS08230	COG0776	regulation of translation
GOQ09_RS08240	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
GOQ09_RS08245	COG0287	Prephenate dehydrogenase
GOQ09_RS08250	COG1605	Chorismate mutase
GOQ09_RS08250	COG0077	Prephenate dehydratase
GOQ09_RS08255	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GOQ09_RS08275	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOQ09_RS08290	COG4797	methyltransferase
GOQ09_RS08290	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_RS08300	COG1187	pseudouridine synthase activity
GOQ09_RS08325	COG1546	Belongs to the CinA family
GOQ09_RS08325	COG1058	Belongs to the CinA family
GOQ09_RS08330	COG0174	glutamine synthetase
GOQ09_RS08340	COG3852	Histidine kinase
GOQ09_RS08345	COG2204	response regulator
GOQ09_RS08355	COG0708	Exodeoxyribonuclease III
GOQ09_RS08395	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GOQ09_RS08410	COG5002	protein histidine kinase activity
GOQ09_RS08415	COG0392	lysyltransferase activity
GOQ09_RS08440	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GOQ09_RS08460	COG0277	FAD linked oxidase domain protein
GOQ09_RS08470	COG1295	ribonuclease BN
GOQ09_RS08480	COG3118	belongs to the thioredoxin family
GOQ09_RS08490	COG0583	DNA-binding transcription factor activity
GOQ09_RS08500	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS08505	COG2267	carboxylic ester hydrolase activity
GOQ09_RS08525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOQ09_RS08530	COG0583	DNA-binding transcription factor activity
GOQ09_RS08580	COG3265	gluconokinase activity
GOQ09_RS08585	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GOQ09_RS08610	COG0346	lactoylglutathione lyase activity
GOQ09_RS08620	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_RS08635	COG0625	glutathione transferase activity
GOQ09_RS08650	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
GOQ09_RS08655	COG2719	SpoVR family
GOQ09_RS08660	COG2718	Belongs to the UPF0229 family
GOQ09_RS08665	COG2766	serine protein kinase
GOQ09_RS08670	COG0484	heat shock protein binding
GOQ09_RS08675	COG0443	Heat shock 70 kDa protein
GOQ09_RS08680	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GOQ09_RS08695	COG0688	phosphatidylethanolamine metabolic process
GOQ09_RS08700	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS08705	COG2706	6-phosphogluconolactonase activity
GOQ09_RS08720	COG2721	sulfolactate sulfo-lyase activity
GOQ09_RS08735	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS08745	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_RS08750	COG2186	Transcriptional regulator
GOQ09_RS08755	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS08760	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_RS08775	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS08780	COG0477	Major facilitator Superfamily
GOQ09_RS08800	COG1538	Outer membrane efflux protein
GOQ09_RS08805	COG0842	Transport permease protein
GOQ09_RS08810	COG0842	Transport permease protein
GOQ09_RS08815	COG1131	(ABC) transporter
GOQ09_RS08820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS08830	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS08835	COG0625	glutathione transferase activity
GOQ09_RS08840	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GOQ09_RS08850	COG1802	Transcriptional regulator
GOQ09_RS08885	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_RS08900	COG0583	DNA-binding transcription factor activity
GOQ09_RS08905	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_RS08910	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS08930	COG2814	Major facilitator Superfamily
GOQ09_RS08940	COG0358	DNA primase activity
GOQ09_RS08945	COG1959	2 iron, 2 sulfur cluster binding
GOQ09_RS08945	COG1295	ribonuclease BN
GOQ09_RS08960	COG0123	including yeast histone deacetylase and acetoin utilization protein
GOQ09_RS08975	COG3237	CsbD-like
GOQ09_RS08980	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOQ09_RS08990	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOQ09_RS09005	COG1611	Belongs to the LOG family
GOQ09_RS09010	COG1024	Enoyl-CoA hydratase
GOQ09_RS09015	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GOQ09_RS09030	COG0322	excinuclease ABC activity
GOQ09_RS09045	COG0583	DNA-binding transcription factor activity
GOQ09_RS09050	COG0596	Alpha beta hydrolase
GOQ09_RS09055	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_RS09070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_RS09110	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
GOQ09_RS09115	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GOQ09_RS09130	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOQ09_RS09135	COG0670	Belongs to the BI1 family
GOQ09_RS09140	COG3193	protein, possibly involved in utilization of glycolate and propanediol
GOQ09_RS09170	COG4774	siderophore transport
GOQ09_RS09175	COG3128	pkhd-type hydroxylase
GOQ09_RS09205	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
GOQ09_RS09220	COG0360	Binds together with S18 to 16S ribosomal RNA
GOQ09_RS09225	COG2965	DNA replication, synthesis of RNA primer
GOQ09_RS09230	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GOQ09_RS09235	COG0359	binds to the 23S rRNA
GOQ09_RS09240	COG0305	Participates in initiation and elongation during chromosome replication
GOQ09_RS09265	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
GOQ09_RS09270	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
GOQ09_RS09280	COG0436	Aminotransferase
GOQ09_RS09290	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
GOQ09_RS09295	COG1763	Mo-molybdopterin cofactor biosynthetic process
GOQ09_RS09300	COG0303	'Molybdopterin
GOQ09_RS09305	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
GOQ09_RS09310	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_RS09315	COG0314	molybdopterin synthase activity
GOQ09_RS09320	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS09325	COG0542	response to heat
GOQ09_RS09335	COG1022	Amp-dependent synthetase and ligase
GOQ09_RS09365	COG1309	transcriptional regulator
GOQ09_RS09370	COG0183	Belongs to the thiolase family
GOQ09_RS09390	COG0583	DNA-binding transcription factor activity
GOQ09_RS09400	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
GOQ09_RS09405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOQ09_RS09420	COG2814	Major facilitator Superfamily
GOQ09_RS09440	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GOQ09_RS09445	COG3214	Protein conserved in bacteria
GOQ09_RS09460	COG0673	inositol 2-dehydrogenase activity
GOQ09_RS09470	COG1309	transcriptional regulator
GOQ09_RS09475	COG0028	Belongs to the TPP enzyme family
GOQ09_RS09495	COG2224	Isocitrate lyase
GOQ09_RS09500	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GOQ09_RS09505	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GOQ09_RS09510	COG0291	Belongs to the bacterial ribosomal protein bL35 family
GOQ09_RS09515	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GOQ09_RS09520	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GOQ09_RS09525	COG0072	phenylalanine-tRNA ligase activity
GOQ09_RS09525	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_RS09530	COG0776	regulation of translation
GOQ09_RS09565	COG5001	Diguanylate cyclase
GOQ09_RS09565	COG3447	MASE1 domain protein
GOQ09_RS09565	COG5002	protein histidine kinase activity
GOQ09_RS09570	COG2223	nitrite transmembrane transporter activity
GOQ09_RS09575	COG3604	Transcriptional regulator
GOQ09_RS09595	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS09605	COG1309	transcriptional regulator
GOQ09_RS09610	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GOQ09_RS09635	COG2205	protein histidine kinase activity
GOQ09_RS09660	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
GOQ09_RS09675	COG1595	DNA-templated transcription, initiation
GOQ09_RS09685	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS09690	COG2721	sulfolactate sulfo-lyase activity
GOQ09_RS09710	COG2197	response regulator
GOQ09_RS09725	COG0702	epimerase
GOQ09_RS09780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_RS09790	COG0673	inositol 2-dehydrogenase activity
GOQ09_RS09795	COG0438	transferase activity, transferring glycosyl groups
GOQ09_RS09815	COG0500	methyltransferase
GOQ09_RS09845	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
GOQ09_RS09855	COG2204	response regulator
GOQ09_RS09875	COG3546	catalase activity
GOQ09_RS09880	COG3685	Protein conserved in bacteria
GOQ09_RS09950	COG0431	NADPH-dependent FMN reductase
GOQ09_RS09965	COG0798	PFAM Bile acid sodium symporter
GOQ09_RS10005	COG2199	diguanylate cyclase activity
GOQ09_RS10005	COG3287	FIST C domain
GOQ09_RS10005	COG2200	EAL domain
GOQ09_RS10010	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
GOQ09_RS10025	COG0366	Alpha amylase catalytic
GOQ09_RS10050	COG0071	Belongs to the small heat shock protein (HSP20) family
GOQ09_RS10065	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_RS10070	COG0366	Alpha amylase catalytic
GOQ09_RS10075	COG0366	Alpha amylase catalytic
GOQ09_RS10090	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GOQ09_RS10095	COG1640	4-alpha-glucanotransferase
GOQ09_RS10110	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS10120	COG0583	DNA-binding transcription factor activity
GOQ09_RS10250	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GOQ09_RS10255	COG2010	Cytochrome c
GOQ09_RS10255	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GOQ09_RS10285	COG0028	Belongs to the TPP enzyme family
GOQ09_RS10295	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
GOQ09_RS10300	COG1335	isochorismatase
GOQ09_RS10305	COG0300	oxidoreductase activity
GOQ09_RS10340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS10355	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS10365	COG3045	CreA protein
GOQ09_RS10395	COG3243	poly(R)-hydroxyalkanoic acid synthase
GOQ09_RS10400	COG0183	Belongs to the thiolase family
GOQ09_RS10405	COG0583	DNA-binding transcription factor activity
GOQ09_RS10415	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GOQ09_RS10420	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS10450	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS10455	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_RS10465	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS10470	COG0601	transmembrane transport
GOQ09_RS10475	COG4166	transmembrane transport
GOQ09_RS10480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS10495	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_RS10505	COG1522	sequence-specific DNA binding
GOQ09_RS10540	COG1056	cytidyltransferase-related domain
GOQ09_RS10540	COG1051	belongs to the nudix hydrolase family
GOQ09_RS10545	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GOQ09_RS10545	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_RS10550	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOQ09_RS10585	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS10590	COG1301	dicarboxylic acid transport
GOQ09_RS10595	COG4651	solute:proton antiporter activity
GOQ09_RS10595	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
GOQ09_RS10640	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS10645	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOQ09_RS10650	COG0583	DNA-binding transcription factor activity
GOQ09_RS10670	COG0028	Belongs to the TPP enzyme family
GOQ09_RS10680	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS10685	COG3384	dioxygenase
GOQ09_RS10700	COG2159	amidohydrolase
GOQ09_RS10705	COG0583	DNA-binding transcription factor activity
GOQ09_RS10730	COG0702	epimerase
GOQ09_RS10740	COG3252	Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT
GOQ09_RS10755	COG1795	PFAM Formaldehyde-activating enzyme (Fae)
GOQ09_RS10765	COG3284	Transcriptional regulator
GOQ09_RS10805	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GOQ09_RS10815	COG1229	Formylmethanofuran dehydrogenase subunit A
GOQ09_RS10820	COG2037	Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT)
GOQ09_RS10875	COG2197	response regulator
GOQ09_RS10880	COG3851	Histidine kinase
GOQ09_RS10895	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GOQ09_RS10910	COG0535	radical SAM domain protein
GOQ09_RS10940	COG0714	Associated with various cellular activities
GOQ09_RS10970	COG2010	Cytochrome c
GOQ09_RS11015	COG1850	ribulose-bisphosphate carboxylase activity
GOQ09_RS11025	COG0464	growth
GOQ09_RS11030	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_RS11035	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
GOQ09_RS11040	COG0546	phosphoglycolate phosphatase activity
GOQ09_RS11045	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
GOQ09_RS11050	COG3954	Phosphoribulokinase
GOQ09_RS11055	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOQ09_RS11060	COG0191	fructose-bisphosphate aldolase activity
GOQ09_RS11070	COG0861	Integral membrane protein TerC family
GOQ09_RS11075	COG3360	Dodecin
GOQ09_RS11090	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
GOQ09_RS11095	COG0583	DNA-binding transcription factor activity
GOQ09_RS11125	COG1294	oxidase, subunit
GOQ09_RS11130	COG1271	oxidase subunit
GOQ09_RS11145	COG1538	Outer membrane efflux protein
GOQ09_RS11160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_RS11165	COG0583	DNA-binding transcription factor activity
GOQ09_RS11175	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS11185	COG4221	oxidoreductase activity
GOQ09_RS11230	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOQ09_RS11240	COG1802	Transcriptional regulator
GOQ09_RS11245	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
GOQ09_RS11245	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
GOQ09_RS11255	COG1703	isobutyryl-CoA mutase activity
GOQ09_RS11260	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_RS11265	COG4770	biotin carboxylase activity
GOQ09_RS11270	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
GOQ09_RS11280	COG1522	sequence-specific DNA binding
GOQ09_RS11285	COG0697	spore germination
GOQ09_RS11295	COG2878	Part of a membrane complex involved in electron transport
GOQ09_RS11310	COG0556	nucleotide-excision repair
GOQ09_RS11315	COG1959	2 iron, 2 sulfur cluster binding
GOQ09_RS11320	COG1104	cysteine desulfurase activity
GOQ09_RS11325	COG0822	iron-sulfur transferase activity
GOQ09_RS11335	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
GOQ09_RS11340	COG0443	Heat shock 70 kDa protein
GOQ09_RS11345	COG0633	Ferredoxin
GOQ09_RS11365	COG0579	oxidoreductase
GOQ09_RS11380	COG0167	dihydroorotate dehydrogenase activity
GOQ09_RS11385	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GOQ09_RS11400	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GOQ09_RS11405	COG4566	intracellular signal transduction
GOQ09_RS11415	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
GOQ09_RS11420	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOQ09_RS11425	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GOQ09_RS11430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOQ09_RS11435	COG0791	NLP P60 protein
GOQ09_RS11440	COG2133	pyrroloquinoline quinone binding
GOQ09_RS11455	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_RS11460	COG0567	Dehydrogenase, E1 component
GOQ09_RS11465	COG0508	dehydrogenase complex catalyzes the overall conversion of
GOQ09_RS11470	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GOQ09_RS11475	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
GOQ09_RS11495	COG1199	ATP-dependent helicase activity
GOQ09_RS11505	COG0564	pseudouridine synthase activity
GOQ09_RS11510	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GOQ09_RS11515	COG1187	pseudouridine synthase activity
GOQ09_RS11520	COG0105	UTP biosynthetic process
GOQ09_RS11525	COG0820	rRNA (adenine-C2-)-methyltransferase activity
GOQ09_RS11540	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GOQ09_RS11545	COG0124	histidyl-tRNA synthetase
GOQ09_RS11555	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
GOQ09_RS11560	COG1160	GTP binding
GOQ09_RS11565	COG1923	regulation of RNA biosynthetic process
GOQ09_RS11570	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GOQ09_RS11575	COG0330	HflC and HflK could
GOQ09_RS11580	COG0330	HflC and HflK could
GOQ09_RS11590	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GOQ09_RS11595	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOQ09_RS11620	COG0626	cystathionine gamma-synthase activity
GOQ09_RS11640	COG4181	ATPase activity
GOQ09_RS11650	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOQ09_RS11660	COG1396	sequence-specific DNA binding
GOQ09_RS11670	COG0667	Aldo Keto reductase
GOQ09_RS11675	COG2059	Chromate
GOQ09_RS11685	COG1295	ribonuclease BN
GOQ09_RS11705	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS11755	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS11770	COG1024	Enoyl-CoA hydratase
GOQ09_RS11800	COG0514	ATP-dependent DNA helicase (RecQ)
GOQ09_RS11895	COG1987	bacterial-type flagellum assembly
GOQ09_RS11900	COG1684	flagellar biosynthetic protein fliR
GOQ09_RS11905	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_RS11910	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
GOQ09_RS11915	COG4786	Flagellar basal body rod
GOQ09_RS11920	COG4786	Flagellar basal body rod
GOQ09_RS11930	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GOQ09_RS11935	COG1706	bacterial-type flagellum-dependent cell motility
GOQ09_RS11945	COG1558	bacterial-type flagellum-dependent cell motility
GOQ09_RS11950	COG1677	Flagellar hook-basal body complex protein FliE
GOQ09_RS11970	COG1157	protein secretion by the type III secretion system
GOQ09_RS11985	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GOQ09_RS11990	COG1749	Flagellar hook protein flgE
GOQ09_RS12015	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOQ09_RS12050	COG3128	pkhd-type hydroxylase
GOQ09_RS12070	COG0582	viral genome integration into host DNA
GOQ09_RS12110	COG0625	glutathione transferase activity
GOQ09_RS12115	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_RS12140	COG0248	Ppx GppA phosphatase
GOQ09_RS12145	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
GOQ09_RS12150	COG0573	inorganic phosphate transmembrane transporter activity
GOQ09_RS12155	COG0581	inorganic phosphate transmembrane transporter activity
GOQ09_RS12160	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
GOQ09_RS12175	COG5002	protein histidine kinase activity
GOQ09_RS12180	COG0534	Mate efflux family protein
GOQ09_RS12190	COG0254	rRNA binding
GOQ09_RS12195	COG0673	inositol 2-dehydrogenase activity
GOQ09_RS12200	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GOQ09_RS12215	COG1074	ATP-dependent DNA helicase activity
GOQ09_RS12225	COG1733	regulation of RNA biosynthetic process
GOQ09_RS12240	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOQ09_RS12245	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GOQ09_RS12250	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOQ09_RS12260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS12270	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS12275	COG0741	lytic transglycosylase activity
GOQ09_RS12275	COG1388	LysM domain
GOQ09_RS12280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
GOQ09_RS12290	COG0328	RNA-DNA hybrid ribonuclease activity
GOQ09_RS12300	COG0746	molybdenum cofactor guanylyltransferase activity
GOQ09_RS12305	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
GOQ09_RS12320	COG1012	belongs to the aldehyde dehydrogenase family
GOQ09_RS12330	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS12390	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GOQ09_RS12405	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_RS12405	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
GOQ09_RS12420	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
GOQ09_RS12445	COG0028	Belongs to the TPP enzyme family
GOQ09_RS12450	COG0440	acetolactate synthase activity
GOQ09_RS12460	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GOQ09_RS12465	COG1183	phosphatidylcholine synthase activity
GOQ09_RS12470	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_RS12475	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_RS12485	COG1414	Transcriptional regulator
GOQ09_RS12490	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
GOQ09_RS12495	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
GOQ09_RS12515	COG1414	Transcriptional regulator
GOQ09_RS12530	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_RS12555	COG5295	Hep Hag repeat protein
GOQ09_RS12585	COG2022	thiamine diphosphate biosynthetic process
GOQ09_RS12600	COG0351	phosphomethylpyrimidine kinase
GOQ09_RS12610	COG0492	ferredoxin-NADP+ reductase activity
GOQ09_RS12615	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
GOQ09_RS12620	COG2895	sulfate adenylyltransferase (ATP) activity
GOQ09_RS12655	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS12660	COG0601	transmembrane transport
GOQ09_RS12665	COG0747	negative chemotaxis
GOQ09_RS12670	COG4172	Belongs to the ABC transporter superfamily
GOQ09_RS12675	COG1446	asparaginase
GOQ09_RS12705	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS12710	COG0642	Histidine kinase
GOQ09_RS12715	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS12720	COG0583	DNA-binding transcription factor activity
GOQ09_RS12725	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS12730	COG3588	fructose-bisphosphate aldolase
GOQ09_RS12735	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_RS12760	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS12760	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_RS12765	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
GOQ09_RS12775	COG0431	NADPH-dependent FMN reductase
GOQ09_RS12780	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS12785	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
GOQ09_RS12790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS12795	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS12800	COG1116	anion transmembrane transporter activity
GOQ09_RS12805	COG2873	o-acetylhomoserine
GOQ09_RS12815	COG1045	serine acetyltransferase
GOQ09_RS12830	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_RS12840	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GOQ09_RS12850	COG0450	alkyl hydroperoxide reductase
GOQ09_RS12860	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
GOQ09_RS12870	COG4208	sulfate ABC transporter
GOQ09_RS12875	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
GOQ09_RS12880	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
GOQ09_RS12890	COG3550	peptidyl-serine autophosphorylation
GOQ09_RS12905	COG1196	nuclear chromosome segregation
GOQ09_RS12915	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GOQ09_RS12925	COG0242	peptide deformylase activity
GOQ09_RS12935	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS12940	COG4597	amino acid ABC transporter
GOQ09_RS12945	COG0765	amino acid transport
GOQ09_RS12955	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
GOQ09_RS12960	COG0024	Methionine aminopeptidase
GOQ09_RS12965	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOQ09_RS12965	COG0047	phosphoribosylformylglycinamidine synthase activity
GOQ09_RS12970	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_RS12980	COG2917	probably involved in intracellular septation
GOQ09_RS12985	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_RS12990	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
GOQ09_RS13000	COG2272	Belongs to the type-B carboxylesterase lipase family
GOQ09_RS13005	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS13030	COG0411	ABC transporter
GOQ09_RS13040	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS13040	COG1024	Enoyl-CoA hydratase
GOQ09_RS13045	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_RS13050	COG0183	Belongs to the thiolase family
GOQ09_RS13055	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS13075	COG2130	NADP-dependent
GOQ09_RS13080	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS13095	COG1122	ATPase activity
GOQ09_RS13105	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
GOQ09_RS13110	COG0667	Aldo Keto reductase
GOQ09_RS13115	COG2814	Major facilitator Superfamily
GOQ09_RS13120	COG0583	DNA-binding transcription factor activity
GOQ09_RS13145	COG0277	FAD linked oxidase domain protein
GOQ09_RS13145	COG0247	lactate metabolic process
GOQ09_RS13170	COG2814	Major facilitator Superfamily
GOQ09_RS13175	COG2995	paraquat-inducible protein a
GOQ09_RS13180	COG2995	paraquat-inducible protein a
GOQ09_RS13185	COG3008	intermembrane lipid transfer
GOQ09_RS13185	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
GOQ09_RS13195	COG0477	Major facilitator Superfamily
GOQ09_RS13200	COG0534	Mate efflux family protein
GOQ09_RS13225	COG2183	response to ionizing radiation
GOQ09_RS13295	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GOQ09_RS13300	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GOQ09_RS13315	COG0084	hydrolase, TatD family'
GOQ09_RS13320	COG0666	response to abiotic stimulus
GOQ09_RS13330	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_RS13350	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS13385	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS13405	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_RS13425	COG0840	transmembrane signaling receptor activity
GOQ09_RS13440	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_RS13440	COG4977	sequence-specific DNA binding
GOQ09_RS13450	COG5001	Diguanylate cyclase
GOQ09_RS13460	COG0667	Aldo Keto reductase
GOQ09_RS13465	COG0583	DNA-binding transcription factor activity
GOQ09_RS13475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS13500	COG3706	GGDEF domain
GOQ09_RS13505	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS13520	COG1793	dna ligase
GOQ09_RS13520	COG3285	dna ligase
GOQ09_RS13575	COG2832	Protein of unknown function (DUF454)
GOQ09_RS13595	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOQ09_RS13605	COG0583	DNA-binding transcription factor activity
GOQ09_RS13610	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_RS13620	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS13640	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS13655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOQ09_RS13660	COG2030	dehydratase
GOQ09_RS13680	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS13710	COG1024	Enoyl-CoA hydratase
GOQ09_RS13715	COG1609	Transcriptional regulator
GOQ09_RS13720	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS13725	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS13735	COG1850	ribulose-bisphosphate carboxylase activity
GOQ09_RS13745	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_RS13765	COG0515	serine threonine protein kinase
GOQ09_RS13765	COG2815	serine threonine protein kinase
GOQ09_RS13770	COG2205	protein histidine kinase activity
GOQ09_RS13775	COG0596	Alpha beta hydrolase
GOQ09_RS13815	COG3220	belongs to the UPF0276 family
GOQ09_RS13825	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS13835	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
GOQ09_RS13860	COG2207	Transcriptional regulator
GOQ09_RS13925	COG2207	Transcriptional regulator
GOQ09_RS13930	COG0667	Aldo Keto reductase
GOQ09_RS13935	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
GOQ09_RS13940	COG0156	8-amino-7-oxononanoate synthase activity
GOQ09_RS13970	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
GOQ09_RS13970	COG1199	ATP-dependent helicase activity
GOQ09_RS13975	COG5002	protein histidine kinase activity
GOQ09_RS13975	COG0784	Response regulator, receiver
GOQ09_RS13980	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GOQ09_RS14010	COG1619	proteins homologs of microcin C7 resistance protein MccF
GOQ09_RS14040	COG4566	intracellular signal transduction
GOQ09_RS14045	COG4191	Histidine kinase
GOQ09_RS14090	COG1309	transcriptional regulator
GOQ09_RS14100	COG2818	Glycosylase
GOQ09_RS14115	COG1131	(ABC) transporter
GOQ09_RS14135	COG0519	Catalyzes the synthesis of GMP from XMP
GOQ09_RS14135	COG0518	GMP synthase (glutamine-hydrolyzing) activity
GOQ09_RS14165	COG2867	negative regulation of translational initiation
GOQ09_RS14170	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
GOQ09_RS14200	COG1217	gtp-binding protein TYPA
GOQ09_RS14205	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOQ09_RS14210	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GOQ09_RS14215	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GOQ09_RS14220	COG0195	Participates in both transcription termination and antitermination
GOQ09_RS14220	COG2251	uridine kinase activity
GOQ09_RS14225	COG0779	Required for maturation of 30S ribosomal subunits
GOQ09_RS14230	COG0477	Major facilitator Superfamily
GOQ09_RS14235	COG4172	Belongs to the ABC transporter superfamily
GOQ09_RS14240	COG4239	(ABC) transporter, permease
GOQ09_RS14245	COG4174	ABC transporter (Permease)
GOQ09_RS14250	COG4166	transmembrane transport
GOQ09_RS14260	COG1793	dna ligase
GOQ09_RS14310	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
GOQ09_RS14330	COG0583	DNA-binding transcription factor activity
GOQ09_RS14335	COG0436	Aminotransferase
GOQ09_RS14345	COG1643	Atp-dependent helicase
GOQ09_RS14355	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
GOQ09_RS14355	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
GOQ09_RS14360	COG1280	lysine exporter protein (LysE YggA)
GOQ09_RS14395	COG2171	N-acyltransferase activity
GOQ09_RS14405	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_RS14410	COG2890	protein-(glutamine-N5) methyltransferase activity
GOQ09_RS14415	COG0488	(ABC) transporter
GOQ09_RS14425	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOQ09_RS14460	COG0861	Integral membrane protein TerC family
GOQ09_RS14480	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
GOQ09_RS14495	COG0823	Involved in the tonB-independent uptake of proteins
GOQ09_RS14500	COG1132	(ABC) transporter
GOQ09_RS14505	COG1530	ribonuclease E activity
GOQ09_RS14510	COG0424	maF-like protein
GOQ09_RS14515	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GOQ09_RS14520	COG0799	negative regulation of ribosome biogenesis
GOQ09_RS14525	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GOQ09_RS14530	COG0408	coproporphyrinogen oxidase activity
GOQ09_RS14535	COG0151	Belongs to the GarS family
GOQ09_RS14540	COG0217	transcriptional regulatory protein
GOQ09_RS14545	COG2226	methyltransferase
GOQ09_RS14600	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GOQ09_RS14615	COG0433	COG0433 Predicted ATPase
GOQ09_RS14625	COG1595	DNA-templated transcription, initiation
GOQ09_RS14650	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GOQ09_RS14655	COG1744	ABC transporter substrate-binding protein PnrA-like
GOQ09_RS14660	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_RS14670	COG3845	ABC transporter
GOQ09_RS14675	COG4603	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS14680	COG1079	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS14690	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_RS14705	COG2925	Exonuclease
GOQ09_RS14710	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS14715	COG0542	response to heat
GOQ09_RS14720	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
GOQ09_RS14745	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOQ09_RS14750	COG1570	exodeoxyribonuclease VII activity
GOQ09_RS14755	COG0811	peptide transport
GOQ09_RS14760	COG0848	biopolymer transport protein
GOQ09_RS14765	COG1663	tetraacyldisaccharide 4'-kinase activity
GOQ09_RS14770	COG2835	tetraacyldisaccharide 4'-kinase activity
GOQ09_RS14775	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
GOQ09_RS14780	COG0563	adenylate kinase activity
GOQ09_RS14785	COG0252	asparaginase activity
GOQ09_RS14790	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOQ09_RS14800	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_RS14805	COG2814	Major facilitator Superfamily
GOQ09_RS14810	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS14815	COG1024	Enoyl-CoA hydratase
GOQ09_RS14820	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_RS14840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOQ09_RS14850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_RS14855	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
GOQ09_RS14860	COG1534	Rna-binding protein
GOQ09_RS14875	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
GOQ09_RS14885	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GOQ09_RS14895	COG0505	Belongs to the CarA family
GOQ09_RS14900	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOQ09_RS14905	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOQ09_RS14910	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_RS14915	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_RS14920	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GOQ09_RS14925	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_RS14940	COG0750	zinc metalloprotease
GOQ09_RS14945	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GOQ09_RS14950	COG0575	Belongs to the CDS family
GOQ09_RS14960	COG0233	cytoplasmic translational termination
GOQ09_RS14965	COG0528	UMP kinase activity
GOQ09_RS14970	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GOQ09_RS14975	COG0052	Belongs to the universal ribosomal protein uS2 family
GOQ09_RS14990	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GOQ09_RS14990	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
GOQ09_RS14995	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS15000	COG0557	exoribonuclease II activity
GOQ09_RS15020	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GOQ09_RS15025	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
GOQ09_RS15040	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOQ09_RS15050	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS15075	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GOQ09_RS15075	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GOQ09_RS15080	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
GOQ09_RS15080	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
GOQ09_RS15085	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GOQ09_RS15090	COG0560	Phosphoserine phosphatase
GOQ09_RS15110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS15115	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOQ09_RS15120	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS15135	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
GOQ09_RS15140	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
GOQ09_RS15145	COG1492	cobalamin metabolic process
GOQ09_RS15160	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS15165	COG0657	acetylesterase activity
GOQ09_RS15180	COG1346	cytolysis
GOQ09_RS15190	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GOQ09_RS15200	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
GOQ09_RS15205	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
GOQ09_RS15210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GOQ09_RS15225	COG4206	TonB-dependent receptor
GOQ09_RS15240	COG0730	response to heat
GOQ09_RS15255	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GOQ09_RS15270	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS15275	COG1024	Enoyl-CoA hydratase
GOQ09_RS15290	COG1802	Transcriptional regulator
GOQ09_RS15295	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GOQ09_RS15305	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS15310	COG0583	DNA-binding transcription factor activity
GOQ09_RS15315	COG0583	DNA-binding transcription factor activity
GOQ09_RS15320	COG0129	dihydroxy-acid dehydratase activity
GOQ09_RS15335	COG4654	Cytochrome c, class I
GOQ09_RS15345	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
GOQ09_RS15355	COG0583	DNA-binding transcription factor activity
GOQ09_RS15360	COG2910	NAD(P)H-binding
GOQ09_RS15365	COG0114	fumarate hydratase activity
GOQ09_RS15375	COG4176	ABC-type proline glycine betaine transport system permease component
GOQ09_RS15380	COG2113	Glycine betaine
GOQ09_RS15390	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
GOQ09_RS15425	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
GOQ09_RS15430	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GOQ09_RS15435	COG0740	serine-type endopeptidase activity
GOQ09_RS15440	COG0544	peptidyl-prolyl cis-trans isomerase activity
GOQ09_RS15455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS15460	COG3158	transport of potassium into the cell
GOQ09_RS15470	COG1562	ergosterol biosynthetic process
GOQ09_RS15475	COG3349	Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
GOQ09_RS15490	COG1011	Hydrolase
GOQ09_RS15495	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
GOQ09_RS15520	COG0410	ABC transporter
GOQ09_RS15540	COG0443	Heat shock 70 kDa protein
GOQ09_RS15595	COG0642	Histidine kinase
GOQ09_RS15605	COG2326	polyphosphate kinase activity
GOQ09_RS15745	COG0740	serine-type endopeptidase activity
GOQ09_RS15885	COG0582	viral genome integration into host DNA
GOQ09_RS15895	COG0527	aspartate kinase activity
GOQ09_RS15900	COG0037	tRNA processing
GOQ09_RS15905	COG0825	malonyl-CoA metabolic process
GOQ09_RS15915	COG0215	cysteine-tRNA ligase activity
GOQ09_RS15935	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
GOQ09_RS15940	COG3228	Belongs to the MtfA family
GOQ09_RS15960	COG0741	lytic transglycosylase activity
GOQ09_RS15965	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GOQ09_RS15970	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GOQ09_RS16005	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOQ09_RS16005	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOQ09_RS16020	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
GOQ09_RS16025	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOQ09_RS16030	COG0436	Aminotransferase
GOQ09_RS16035	COG0824	Thioesterase
GOQ09_RS16045	COG0848	biopolymer transport protein
GOQ09_RS16065	COG1054	Belongs to the UPF0176 family
GOQ09_RS16070	COG1741	Belongs to the pirin family
GOQ09_RS16080	COG2259	Doxx family
GOQ09_RS16085	COG1741	Belongs to the pirin family
GOQ09_RS16095	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
GOQ09_RS16095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS16100	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_RS16105	COG0220	tRNA (guanine-N7-)-methyltransferase activity
GOQ09_RS16120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_RS16145	COG3976	FMN-binding domain protein
GOQ09_RS16145	COG1053	succinate dehydrogenase
GOQ09_RS16155	COG0235	Class ii aldolase
GOQ09_RS16205	COG3842	ATPase activity
GOQ09_RS16225	COG0784	Response regulator, receiver
GOQ09_RS16225	COG2198	Histidine kinase
GOQ09_RS16225	COG2205	protein histidine kinase activity
GOQ09_RS16230	COG3437	response regulator, receiver
GOQ09_RS16250	COG0308	aminopeptidase N
GOQ09_RS16265	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GOQ09_RS16310	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS16350	COG1596	polysaccharide export
GOQ09_RS16355	COG0489	protein tyrosine kinase activity
GOQ09_RS16355	COG3206	protein involved in exopolysaccharide biosynthesis
GOQ09_RS16360	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
GOQ09_RS16365	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_RS16395	COG0297	glycogen (starch) synthase activity
GOQ09_RS16400	COG2197	response regulator
GOQ09_RS16430	COG0587	DNA-directed DNA polymerase activity
GOQ09_RS16465	COG0129	dihydroxy-acid dehydratase activity
GOQ09_RS16500	COG2267	carboxylic ester hydrolase activity
GOQ09_RS16505	COG3384	dioxygenase
GOQ09_RS16515	COG2197	response regulator
GOQ09_RS16530	COG1132	(ABC) transporter
GOQ09_RS16540	COG1309	transcriptional regulator
GOQ09_RS16550	COG1160	GTP binding
GOQ09_RS16560	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_RS16565	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
GOQ09_RS16570	COG2080	2 iron, 2 sulfur cluster binding
GOQ09_RS16585	COG1272	protein, Hemolysin III
GOQ09_RS16595	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOQ09_RS16605	COG0640	Transcriptional regulator
GOQ09_RS16615	COG1183	phosphatidylcholine synthase activity
GOQ09_RS16620	COG0625	glutathione transferase activity
GOQ09_RS16645	COG1360	Flagellar Motor Protein
GOQ09_RS16670	COG2079	MmgE PrpD family protein
GOQ09_RS16695	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GOQ09_RS16700	COG0583	DNA-binding transcription factor activity
GOQ09_RS16710	COG1024	Enoyl-CoA hydratase
GOQ09_RS16760	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GOQ09_RS16765	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS16770	COG0583	DNA-binding transcription factor activity
GOQ09_RS16790	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
GOQ09_RS16800	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS16805	COG0545	Peptidyl-prolyl cis-trans isomerase
GOQ09_RS16810	COG0531	amino acid
GOQ09_RS16815	COG4303	Ethanolamine ammonia lyase large subunit
GOQ09_RS16820	COG4302	ethanolamine ammonia-lyase activity
GOQ09_RS16850	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS16855	COG0642	Histidine kinase
GOQ09_RS16860	COG0824	Thioesterase
GOQ09_RS16870	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS16885	COG2814	Major facilitator Superfamily
GOQ09_RS16890	COG4336	lyase activity
GOQ09_RS16895	COG0583	DNA-binding transcription factor activity
GOQ09_RS16900	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_RS16905	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS16915	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_RS16915	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS16925	COG0404	The glycine cleavage system catalyzes the degradation of glycine
GOQ09_RS16930	COG0509	glycine decarboxylation via glycine cleavage system
GOQ09_RS16935	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GOQ09_RS16935	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
GOQ09_RS16980	COG2197	response regulator
GOQ09_RS17005	COG2249	NAD(P)H dehydrogenase (quinone) activity
GOQ09_RS17015	COG0251	oxidation-reduction process
GOQ09_RS17030	COG0477	Major facilitator Superfamily
GOQ09_RS17035	COG3185	4-Hydroxyphenylpyruvate dioxygenase
GOQ09_RS17035	COG1082	Xylose isomerase domain protein TIM barrel
GOQ09_RS17045	COG2814	Major facilitator Superfamily
GOQ09_RS17050	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_RS17075	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_RS17080	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOQ09_RS17085	COG1414	Transcriptional regulator
GOQ09_RS17160	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GOQ09_RS17205	COG0477	Major facilitator Superfamily
GOQ09_RS17215	COG0640	Transcriptional regulator
GOQ09_RS17235	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS17250	COG3264	Mechanosensitive ion channel
GOQ09_RS17250	COG1511	domain protein
GOQ09_RS17260	COG0714	Associated with various cellular activities
GOQ09_RS17275	COG2951	lytic endotransglycosylase activity
GOQ09_RS17305	COG1131	(ABC) transporter
GOQ09_RS17340	COG0395	ABC-type sugar transport system, permease component
GOQ09_RS17355	COG3842	ATPase activity
GOQ09_RS17370	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GOQ09_RS17385	COG2308	Evidence 4 Homologs of previously reported genes of
GOQ09_RS17410	COG1305	Transglutaminase-like
GOQ09_RS17425	COG1609	Transcriptional regulator
GOQ09_RS17435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOQ09_RS17445	COG1126	abc transporter atp-binding protein
GOQ09_RS17450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS17455	COG0765	amino acid transport
GOQ09_RS17460	COG0765	amino acid transport
GOQ09_RS17505	COG0741	lytic transglycosylase activity
GOQ09_RS17505	COG1196	nuclear chromosome segregation
GOQ09_RS17505	COG0739	heme binding
GOQ09_RS17530	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_RS17535	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
GOQ09_RS17540	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
GOQ09_RS17555	COG2850	peptidyl-arginine hydroxylation
GOQ09_RS17560	COG1047	Peptidyl-prolyl cis-trans
GOQ09_RS17570	COG0756	dUTP diphosphatase activity
GOQ09_RS17580	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GOQ09_RS17585	COG0504	CTP synthase activity
GOQ09_RS17590	COG2877	3-deoxy-8-phosphooctulonate synthase activity
GOQ09_RS17600	COG0148	phosphopyruvate hydratase activity
GOQ09_RS17605	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GOQ09_RS17610	COG3201	nicotinamide mononucleotide transporter
GOQ09_RS17630	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS17640	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GOQ09_RS17650	COG2833	Protein of unknown function (DUF455)
GOQ09_RS17660	COG0183	Belongs to the thiolase family
GOQ09_RS17670	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS17685	COG4974	Belongs to the 'phage' integrase family
GOQ09_RS17690	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS17700	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
GOQ09_RS17705	COG0802	atpase or kinase
GOQ09_RS17710	COG0860	N-Acetylmuramoyl-L-alanine amidase
GOQ09_RS17720	COG0586	Pfam SNARE associated Golgi protein
GOQ09_RS17725	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GOQ09_RS17735	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GOQ09_RS17740	COG4181	ATPase activity
GOQ09_RS17750	COG2186	Transcriptional regulator
GOQ09_RS17835	COG1566	PFAM secretion protein HlyD family protein
GOQ09_RS17845	COG1846	Transcriptional regulator
GOQ09_RS17850	COG1132	(ABC) transporter
GOQ09_RS17870	COG1007	ATP synthesis coupled electron transport
GOQ09_RS17885	COG0713	ATP synthesis coupled electron transport
GOQ09_RS17895	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_RS17900	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
GOQ09_RS17905	COG1034	ATP synthesis coupled electron transport
GOQ09_RS17920	COG0649	NAD binding
GOQ09_RS17925	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_RS17930	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_RS17935	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
GOQ09_RS17950	COG0149	triose-phosphate isomerase activity
GOQ09_RS17960	COG1185	polyribonucleotide nucleotidyltransferase activity
GOQ09_RS17965	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GOQ09_RS17970	COG0436	Aminotransferase
GOQ09_RS17975	COG0683	leucine binding
GOQ09_RS17990	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOQ09_RS17995	COG3707	response regulator
GOQ09_RS18000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS18005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS18010	COG1116	anion transmembrane transporter activity
GOQ09_RS18020	COG2223	nitrite transmembrane transporter activity
GOQ09_RS18030	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
GOQ09_RS18045	COG0243	molybdopterin cofactor binding
GOQ09_RS18050	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GOQ09_RS18060	COG3842	ATPase activity
GOQ09_RS18070	COG1176	ABC-type spermidine putrescine transport system, permease component I
GOQ09_RS18075	COG3833	ABC-type maltose transport systems, permease component
GOQ09_RS18085	COG0791	NLP P60 protein
GOQ09_RS18090	COG2081	HI0933 family
GOQ09_RS18095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
GOQ09_RS18100	COG1610	YqeY-like protein
GOQ09_RS18105	COG0494	nUDIX hydrolase
GOQ09_RS18120	COG1063	alcohol dehydrogenase
GOQ09_RS18125	COG3842	ATPase activity
GOQ09_RS18130	COG0395	ABC-type sugar transport system, permease component
GOQ09_RS18140	COG1653	transport
GOQ09_RS18155	COG4977	sequence-specific DNA binding
GOQ09_RS18155	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_RS18165	COG0312	modulator of DNA gyrase
GOQ09_RS18175	COG0521	Mo-molybdopterin cofactor biosynthetic process
GOQ09_RS18190	COG0475	glutathione-regulated potassium exporter activity
GOQ09_RS18210	COG0789	Transcriptional regulator
GOQ09_RS18220	COG1045	serine acetyltransferase
GOQ09_RS18230	COG0483	inositol monophosphate 1-phosphatase activity
GOQ09_RS18235	COG1289	transmembrane transporter activity
GOQ09_RS18245	COG2311	Membrane
GOQ09_RS18265	COG3119	arylsulfatase activity
GOQ09_RS18270	COG1802	Transcriptional regulator
GOQ09_RS18280	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS18320	COG2375	cellular response to nickel ion
GOQ09_RS18325	COG0598	Magnesium transport protein CorA
GOQ09_RS18335	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GOQ09_RS18350	COG2197	response regulator
GOQ09_RS18370	COG1968	undecaprenyl-diphosphatase activity
GOQ09_RS18380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS18385	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GOQ09_RS18390	COG1737	Transcriptional regulator
GOQ09_RS18410	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_RS18415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS18430	COG2972	Histidine kinase
GOQ09_RS18445	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_RS18465	COG0004	ammonium transporteR
GOQ09_RS18490	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GOQ09_RS18500	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
GOQ09_RS18500	COG0517	IMP dehydrogenase activity
GOQ09_RS18510	COG0789	Transcriptional regulator
GOQ09_RS18520	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS18525	COG2201	protein-glutamate methylesterase activity
GOQ09_RS18530	COG2918	glutathione biosynthetic process
GOQ09_RS18545	COG0523	cobalamin synthesis protein
GOQ09_RS18575	COG2354	Protein conserved in bacteria
GOQ09_RS18585	COG4628	conserved protein (DUF2132)
GOQ09_RS18600	COG0564	pseudouridine synthase activity
GOQ09_RS18620	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
GOQ09_RS18625	COG1262	PFAM Formylglycine-generating sulfatase enzyme
GOQ09_RS18630	COG1252	NADH dehydrogenase
GOQ09_RS18640	COG1525	nuclease
GOQ09_RS18645	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS18650	COG1764	response to oxidative stress
GOQ09_RS18665	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
GOQ09_RS18670	COG0765	amino acid transport
GOQ09_RS18675	COG0765	amino acid transport
GOQ09_RS18695	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_RS18715	COG3191	aminopeptidase activity
GOQ09_RS18725	COG0488	(ABC) transporter
GOQ09_RS18730	COG0513	Belongs to the DEAD box helicase family
GOQ09_RS18750	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS18755	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
GOQ09_RS18760	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
GOQ09_RS18765	COG2186	Transcriptional regulator
GOQ09_RS18770	COG0129	dihydroxy-acid dehydratase activity
GOQ09_RS18780	COG0800	Aldolase
GOQ09_RS18820	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_RS18830	COG3842	ATPase activity
GOQ09_RS18840	COG0346	lactoylglutathione lyase activity
GOQ09_RS18850	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
GOQ09_RS18860	COG0800	Aldolase
GOQ09_RS18885	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOQ09_RS18890	COG0259	pyridoxamine-phosphate oxidase activity
GOQ09_RS18905	COG0679	Auxin Efflux Carrier
GOQ09_RS18920	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOQ09_RS18925	COG1309	transcriptional regulator
GOQ09_RS18930	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
GOQ09_RS18955	COG2169	Transcriptional regulator
GOQ09_RS18965	COG0697	spore germination
GOQ09_RS18985	COG0625	glutathione transferase activity
GOQ09_RS19055	COG2831	hemolysin activation secretion protein
GOQ09_RS19070	COG4774	siderophore transport
GOQ09_RS19105	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
GOQ09_RS19155	COG0671	phosphoesterase, PA-phosphatase related
GOQ09_RS19170	COG0693	protein deglycase activity
GOQ09_RS19190	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOQ09_RS19215	COG0285	dihydrofolate synthase activity
GOQ09_RS19220	COG1393	Belongs to the ArsC family
GOQ09_RS19230	COG3123	guanosine phosphorylase activity
GOQ09_RS19235	COG0137	argininosuccinate synthase activity
GOQ09_RS19245	COG0812	UDP-N-acetylmuramate dehydrogenase activity
GOQ09_RS19250	COG1666	GTP binding
GOQ09_RS19260	COG0251	oxidation-reduction process
GOQ09_RS19265	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
GOQ09_RS19270	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GOQ09_RS19275	COG0667	Aldo Keto reductase
GOQ09_RS19280	COG2267	carboxylic ester hydrolase activity
GOQ09_RS19295	COG1464	Belongs to the NlpA lipoprotein family
GOQ09_RS19300	COG2011	ABC-type metal ion transport system permease component
GOQ09_RS19310	COG1464	Belongs to the NlpA lipoprotein family
GOQ09_RS19320	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_RS19325	COG0308	aminopeptidase N
GOQ09_RS19335	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
GOQ09_RS19345	COG1403	HNH endonuclease
GOQ09_RS19370	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_RS19385	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOQ09_RS19390	COG0583	DNA-binding transcription factor activity
GOQ09_RS19400	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS19410	COG1917	Cupin 2, conserved barrel domain protein
GOQ09_RS19410	COG4977	sequence-specific DNA binding
GOQ09_RS19420	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_RS19435	COG1595	DNA-templated transcription, initiation
GOQ09_RS19460	COG0583	DNA-binding transcription factor activity
GOQ09_RS19485	COG1253	flavin adenine dinucleotide binding
GOQ09_RS19490	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
GOQ09_RS19495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS19505	COG1116	anion transmembrane transporter activity
GOQ09_RS19510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS19515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS19530	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS19535	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS19540	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS19555	COG4977	sequence-specific DNA binding
GOQ09_RS19565	COG2076	Multidrug Resistance protein
GOQ09_RS19570	COG0513	Belongs to the DEAD box helicase family
GOQ09_RS19575	COG2321	neutral zinc metallopeptidase
GOQ09_RS19580	COG0717	Belongs to the dCTP deaminase family
GOQ09_RS19585	COG0402	S-adenosylhomocysteine deaminase activity
GOQ09_RS19600	COG0583	DNA-binding transcription factor activity
GOQ09_RS19610	COG0583	DNA-binding transcription factor activity
GOQ09_RS19615	COG2814	Major facilitator Superfamily
GOQ09_RS19620	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GOQ09_RS19635	COG1309	transcriptional regulator
GOQ09_RS19640	COG1819	glycosyl
GOQ09_RS19685	COG4603	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS19690	COG3845	ABC transporter
GOQ09_RS19695	COG2252	PERMEase
GOQ09_RS19705	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_RS19740	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS19760	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
GOQ09_RS19790	COG2351	hydroxyisourate hydrolase activity
GOQ09_RS19795	COG2186	Transcriptional regulator
GOQ09_RS19810	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
GOQ09_RS19815	COG0596	Alpha beta hydrolase
GOQ09_RS19825	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS19840	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS19845	COG0456	acetyltransferase
GOQ09_RS19865	COG1953	Uracil, thiamine, allantoin
GOQ09_RS19885	COG0656	L-ascorbic acid biosynthetic process
GOQ09_RS19890	COG2814	Major facilitator Superfamily
GOQ09_RS19915	COG2205	protein histidine kinase activity
GOQ09_RS19945	COG3180	Ammonia monooxygenase
GOQ09_RS19995	COG1131	(ABC) transporter
GOQ09_RS20000	COG4771	TonB-dependent receptor
GOQ09_RS20055	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS20065	COG1301	dicarboxylic acid transport
GOQ09_RS20075	COG0628	permease
GOQ09_RS20090	COG0583	DNA-binding transcription factor activity
GOQ09_RS20095	COG3960	tartronate-semialdehyde synthase activity
GOQ09_RS20100	COG3622	Belongs to the hyi family
GOQ09_RS20105	COG2084	Dehydrogenase
GOQ09_RS20115	COG0280	phosphate acetyltransferase
GOQ09_RS20115	COG0281	malic enzyme
GOQ09_RS20130	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
GOQ09_RS20140	COG1116	anion transmembrane transporter activity
GOQ09_RS20145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS20170	COG1733	regulation of RNA biosynthetic process
GOQ09_RS20185	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
GOQ09_RS20195	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
GOQ09_RS20205	COG0829	nickel cation binding
GOQ09_RS20230	COG2879	small protein
GOQ09_RS20235	COG1966	Carbon starvation protein
GOQ09_RS20240	COG0791	NLP P60 protein
GOQ09_RS20260	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS20280	COG0024	Methionine aminopeptidase
GOQ09_RS20290	COG0346	lactoylglutathione lyase activity
GOQ09_RS20295	COG5002	protein histidine kinase activity
GOQ09_RS20330	COG0300	oxidoreductase activity
GOQ09_RS20345	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS20390	COG4948	Mandelate Racemase Muconate Lactonizing
GOQ09_RS20395	COG0583	DNA-binding transcription factor activity
GOQ09_RS20420	COG0417	DNA replication proofreading
GOQ09_RS20440	COG0667	Aldo Keto reductase
GOQ09_RS20445	COG2814	Major facilitator Superfamily
GOQ09_RS20500	COG0613	PHP domain protein
GOQ09_RS20510	COG0009	L-threonylcarbamoyladenylate synthase
GOQ09_RS20515	COG1994	Peptidase M50
GOQ09_RS20520	COG0180	Tryptophanyl-tRNA synthetase
GOQ09_RS20525	COG2197	response regulator
GOQ09_RS20530	COG2205	protein histidine kinase activity
GOQ09_RS20530	COG0784	Response regulator, receiver
GOQ09_RS20530	COG2198	Histidine kinase
GOQ09_RS20540	COG1476	TRANSCRIPTIONal
GOQ09_RS20555	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GOQ09_RS20560	COG2764	glyoxalase bleomycin resistance protein dioxygenase
GOQ09_RS20565	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
GOQ09_RS20570	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GOQ09_RS20575	COG1047	Peptidyl-prolyl cis-trans
GOQ09_RS20580	COG2003	Belongs to the UPF0758 family
GOQ09_RS20605	COG0765	amino acid transport
GOQ09_RS20610	COG0765	amino acid transport
GOQ09_RS20620	COG3491	Belongs to the iron ascorbate-dependent oxidoreductase family
GOQ09_RS20625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_RS20630	COG0477	Major facilitator Superfamily
GOQ09_RS20635	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
GOQ09_RS20640	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
GOQ09_RS20645	COG1845	cytochrome c oxidase, subunit III
GOQ09_RS20650	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
GOQ09_RS20665	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
GOQ09_RS20670	COG1272	protein, Hemolysin III
GOQ09_RS20675	COG2900	Belongs to the SlyX family
GOQ09_RS20685	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
GOQ09_RS20690	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
GOQ09_RS20710	COG0437	4 iron, 4 sulfur cluster binding
GOQ09_RS20715	COG0243	molybdopterin cofactor binding
GOQ09_RS20715	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_RS20750	COG0725	ABC transporter, periplasmic molybdate-binding protein
GOQ09_RS20755	COG4149	molybdate abc transporter
GOQ09_RS20765	COG3383	formate dehydrogenase (NAD+) activity
GOQ09_RS20775	COG0583	DNA-binding transcription factor activity
GOQ09_RS20780	COG0489	protein tyrosine kinase activity
GOQ09_RS20805	COG3132	Protein of unknown function, DUF480
GOQ09_RS20810	COG3698	Phosphodiester glycosidase
GOQ09_RS20815	COG0473	3-isopropylmalate dehydrogenase activity
GOQ09_RS20820	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_RS20820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOQ09_RS20830	COG0659	secondary active sulfate transmembrane transporter activity
GOQ09_RS20850	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
GOQ09_RS20855	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
GOQ09_RS20860	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
GOQ09_RS20865	COG0602	queuosine metabolic process
GOQ09_RS20875	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GOQ09_RS20885	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GOQ09_RS20890	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
GOQ09_RS20900	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GOQ09_RS20905	COG0588	phosphoglycerate mutase activity
GOQ09_RS20910	COG0793	Belongs to the peptidase S41A family
GOQ09_RS20915	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
GOQ09_RS20920	COG2982	Protein involved in outer membrane biogenesis
GOQ09_RS20930	COG2197	response regulator
GOQ09_RS20990	COG3568	Endonuclease Exonuclease Phosphatase
GOQ09_RS20995	COG0494	nUDIX hydrolase
GOQ09_RS21000	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GOQ09_RS21015	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GOQ09_RS21020	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
GOQ09_RS21035	COG2226	methyltransferase
GOQ09_RS21055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_RS21065	COG1175	transmembrane transport
GOQ09_RS21070	COG0395	ABC-type sugar transport system, permease component
GOQ09_RS21075	COG3842	ATPase activity
GOQ09_RS21080	COG0584	glycerophosphoryl diester phosphodiesterase
GOQ09_RS21085	COG1511	domain protein
GOQ09_RS21085	COG3264	Mechanosensitive ion channel
GOQ09_RS21100	COG2831	hemolysin activation secretion protein
GOQ09_RS21110	COG3210	domain, Protein
GOQ09_RS21135	COG1191	sigma factor activity
GOQ09_RS21140	COG0789	Transcriptional regulator
GOQ09_RS21155	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
GOQ09_RS21160	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS21170	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
GOQ09_RS21175	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
GOQ09_RS21180	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
GOQ09_RS21230	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
GOQ09_RS21235	COG1334	flagellar protein FlaG
GOQ09_RS21245	COG1677	Flagellar hook-basal body complex protein FliE
GOQ09_RS21250	COG1766	The M ring may be actively involved in energy transduction
GOQ09_RS21260	COG1317	bacterial-type flagellum organization
GOQ09_RS21270	COG2882	bacterial-type flagellum organization
GOQ09_RS21280	COG1580	Controls the rotational direction of flagella during chemotaxis
GOQ09_RS21300	COG1338	Plays a role in the flagellum-specific transport system
GOQ09_RS21320	COG1256	bacterial-type flagellum assembly
GOQ09_RS21330	COG0840	transmembrane signaling receptor activity
GOQ09_RS21340	COG0840	transmembrane signaling receptor activity
GOQ09_RS21345	COG0835	chemotaxis
GOQ09_RS21350	COG0840	transmembrane signaling receptor activity
GOQ09_RS21360	COG0835	chemotaxis
GOQ09_RS21365	COG1705	Flagellar rod assembly protein muramidase FlgJ
GOQ09_RS21365	COG3951	Flagellar rod assembly protein muramidase FlgJ
GOQ09_RS21370	COG1706	bacterial-type flagellum-dependent cell motility
GOQ09_RS21375	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
GOQ09_RS21385	COG4787	bacterial-type flagellum-dependent cell motility
GOQ09_RS21395	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
GOQ09_RS21405	COG1815	bacterial-type flagellum-dependent cell motility
GOQ09_RS21435	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GOQ09_RS21440	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GOQ09_RS21450	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
GOQ09_RS21460	COG1253	flavin adenine dinucleotide binding
GOQ09_RS21465	COG0741	lytic transglycosylase activity
GOQ09_RS21470	COG0442	prolyl-tRNA aminoacylation
GOQ09_RS21475	COG0494	nUDIX hydrolase
GOQ09_RS21485	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GOQ09_RS21490	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GOQ09_RS21495	COG0211	Belongs to the bacterial ribosomal protein bL27 family
GOQ09_RS21500	COG0261	This protein binds to 23S rRNA in the presence of protein L20
GOQ09_RS21505	COG0142	geranyltranstransferase activity
GOQ09_RS21535	COG1696	Membrane protein involved in D-alanine export
GOQ09_RS21545	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
GOQ09_RS21550	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
GOQ09_RS21555	COG2755	lipolytic protein G-D-S-L family
GOQ09_RS21555	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
GOQ09_RS21560	COG0494	nUDIX hydrolase
GOQ09_RS21570	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GOQ09_RS21575	COG0653	protein targeting
GOQ09_RS21590	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
GOQ09_RS21595	COG0583	DNA-binding transcription factor activity
GOQ09_RS21610	COG0784	Response regulator, receiver
GOQ09_RS21610	COG2205	protein histidine kinase activity
GOQ09_RS21610	COG5002	protein histidine kinase activity
GOQ09_RS21615	COG0831	urea catabolic process
GOQ09_RS21625	COG0832	Belongs to the urease beta subunit family
GOQ09_RS21630	COG0804	urea catabolic process
GOQ09_RS21635	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
GOQ09_RS21640	COG0830	nickel cation binding
GOQ09_RS21645	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
GOQ09_RS21660	COG2982	Protein involved in outer membrane biogenesis
GOQ09_RS21720	COG2274	protein secretion by the type I secretion system
GOQ09_RS21775	COG0635	Involved in the biosynthesis of porphyrin-containing compound
GOQ09_RS21780	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GOQ09_RS21795	COG0515	serine threonine protein kinase
GOQ09_RS21795	COG2815	serine threonine protein kinase
GOQ09_RS21800	COG1561	YicC-like family, N-terminal region
GOQ09_RS21805	COG0194	GDP metabolic process
GOQ09_RS21810	COG1758	RNA polymerase activity
GOQ09_RS21815	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOQ09_RS21845	COG1420	regulation of RNA biosynthetic process
GOQ09_RS21850	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOQ09_RS21855	COG0497	DNA recombination
GOQ09_RS21860	COG1660	Displays ATPase and GTPase activities
GOQ09_RS21870	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
GOQ09_RS21875	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
GOQ09_RS21890	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GOQ09_RS21900	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOQ09_RS21905	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GOQ09_RS21910	COG0193	aminoacyl-tRNA hydrolase activity
GOQ09_RS21920	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
GOQ09_RS21930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
GOQ09_RS21940	COG4608	Belongs to the ABC transporter superfamily
GOQ09_RS21945	COG0747	negative chemotaxis
GOQ09_RS21950	COG0154	amidase activity
GOQ09_RS21960	COG0583	DNA-binding transcription factor activity
GOQ09_RS21985	COG2267	carboxylic ester hydrolase activity
GOQ09_RS21990	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GOQ09_RS22000	COG1984	allophanate hydrolase subunit 2
GOQ09_RS22005	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
GOQ09_RS22010	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GOQ09_RS22015	COG0742	ribosomal rna small subunit methyltransferase
GOQ09_RS22030	COG0612	Peptidase, M16
GOQ09_RS22035	COG0612	Peptidase, M16
GOQ09_RS22050	COG0784	Response regulator, receiver
GOQ09_RS22050	COG2205	protein histidine kinase activity
GOQ09_RS22055	COG2197	response regulator
GOQ09_RS22065	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
GOQ09_RS22070	COG4335	DNA alkylation repair
GOQ09_RS22075	COG1999	signal sequence binding
GOQ09_RS22080	COG0109	protoheme IX farnesyltransferase activity
GOQ09_RS22115	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
GOQ09_RS22135	COG2226	methyltransferase
GOQ09_RS22140	COG1040	competence protein
GOQ09_RS22145	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
GOQ09_RS22155	COG0489	protein tyrosine kinase activity
GOQ09_RS22175	COG1024	Enoyl-CoA hydratase
GOQ09_RS22180	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS22195	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS22210	COG2764	glyoxalase bleomycin resistance protein dioxygenase
GOQ09_RS22225	COG5507	3-demethylubiquinone-9 3-methyltransferase
GOQ09_RS22245	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
GOQ09_RS22255	COG0430	RNA-3'-phosphate cyclase activity
GOQ09_RS22260	COG3541	Predicted nucleotidyltransferase
GOQ09_RS22265	COG1234	tRNA 3'-trailer cleavage
GOQ09_RS22275	COG1690	Belongs to the RtcB family
GOQ09_RS22290	COG4650	regulator
GOQ09_RS22295	COG1073	alpha beta
GOQ09_RS22320	COG1764	response to oxidative stress
GOQ09_RS22335	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS22340	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS22345	COG0183	Belongs to the thiolase family
GOQ09_RS22350	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
GOQ09_RS22360	COG1414	Transcriptional regulator
GOQ09_RS22370	COG3063	Type IV pilus biogenesis stability protein PilW
GOQ09_RS22395	COG4964	Belongs to the GSP D family
GOQ09_RS22455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS22470	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
GOQ09_RS22490	COG0583	DNA-binding transcription factor activity
GOQ09_RS22495	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_RS22500	COG3485	protocatechuate 3,4-dioxygenase
GOQ09_RS22510	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOQ09_RS22545	COG0583	DNA-binding transcription factor activity
GOQ09_RS22560	COG0469	pyruvate kinase activity
GOQ09_RS22565	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_RS22575	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GOQ09_RS22580	COG0045	succinate-CoA ligase (ADP-forming) activity
GOQ09_RS22590	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS22595	COG4191	Histidine kinase
GOQ09_RS22685	COG0540	Belongs to the ATCase OTCase family
GOQ09_RS22690	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GOQ09_RS22695	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOQ09_RS22700	COG1678	Uncharacterized ACR, COG1678
GOQ09_RS22705	COG0415	Belongs to the DNA photolyase family
GOQ09_RS22710	COG2198	Histidine kinase
GOQ09_RS22710	COG0643	Histidine kinase
GOQ09_RS22710	COG0784	Response regulator, receiver
GOQ09_RS22715	COG0840	transmembrane signaling receptor activity
GOQ09_RS22735	COG1773	rubredoxin
GOQ09_RS22740	COG0351	phosphomethylpyrimidine kinase
GOQ09_RS22740	COG0352	thiamine-phosphate diphosphorylase activity
GOQ09_RS22740	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GOQ09_RS22745	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
GOQ09_RS22750	COG0138	bifunctional purine biosynthesis protein purh
GOQ09_RS22765	COG1238	metal cluster binding
GOQ09_RS22775	COG0012	GTP binding
GOQ09_RS22780	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_RS22785	COG1129	ABC transporter
GOQ09_RS22790	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS22795	COG1609	Transcriptional regulator
GOQ09_RS22800	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOQ09_RS22805	COG1869	D-ribose catabolic process
GOQ09_RS22820	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS22835	COG1024	Enoyl-CoA hydratase
GOQ09_RS22855	COG1309	transcriptional regulator
GOQ09_RS22865	COG3145	DNA-N1-methyladenine dioxygenase activity
GOQ09_RS22870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
GOQ09_RS22880	COG2863	cytochrome
GOQ09_RS22885	COG1529	Aldehyde oxidase and xanthine dehydrogenase
GOQ09_RS22885	COG2010	Cytochrome c
GOQ09_RS22900	COG1230	cation diffusion facilitator family transporter
GOQ09_RS22905	COG2255	four-way junction helicase activity
GOQ09_RS22910	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOQ09_RS22915	COG2267	carboxylic ester hydrolase activity
GOQ09_RS22935	COG4589	Belongs to the CDS family
GOQ09_RS22950	COG0632	four-way junction helicase activity
GOQ09_RS22955	COG1702	phosphate starvation-inducible protein PhoH
GOQ09_RS22960	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GOQ09_RS22965	COG4106	trans-aconitate 2-methyltransferase activity
GOQ09_RS22970	COG1490	D-aminoacyl-tRNA deacylase activity
GOQ09_RS22975	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GOQ09_RS22990	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GOQ09_RS22995	COG0739	heme binding
GOQ09_RS23000	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
GOQ09_RS23005	COG0316	Belongs to the HesB IscA family
GOQ09_RS23010	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GOQ09_RS23015	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GOQ09_RS23020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
GOQ09_RS23030	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
GOQ09_RS23035	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOQ09_RS23050	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
GOQ09_RS23060	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GOQ09_RS23090	COG2423	ornithine cyclodeaminase activity
GOQ09_RS23095	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GOQ09_RS23100	COG0683	leucine binding
GOQ09_RS23110	COG0477	Major facilitator Superfamily
GOQ09_RS23140	COG1804	L-carnitine dehydratase bile acid-inducible protein F
GOQ09_RS23155	COG1414	Transcriptional regulator
GOQ09_RS23160	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
GOQ09_RS23180	COG1024	Enoyl-CoA hydratase
GOQ09_RS23185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
GOQ09_RS23190	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS23195	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS23210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
GOQ09_RS23215	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GOQ09_RS23220	COG3012	SEC-C Motif Domain Protein
GOQ09_RS23235	COG1408	metallophosphoesterase
GOQ09_RS23240	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS23250	COG0183	Belongs to the thiolase family
GOQ09_RS23255	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
GOQ09_RS23260	COG0288	reversible hydration of carbon dioxide
GOQ09_RS23265	COG0789	Transcriptional regulator
GOQ09_RS23300	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
GOQ09_RS23305	COG0751	glycine-tRNA ligase activity
GOQ09_RS23310	COG0752	glycyl-tRNA synthetase alpha subunit
GOQ09_RS23320	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
GOQ09_RS23325	COG0671	phosphoesterase, PA-phosphatase related
GOQ09_RS23340	COG0583	DNA-binding transcription factor activity
GOQ09_RS23345	COG2814	Major facilitator Superfamily
GOQ09_RS23375	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS23385	COG0815	Transfers the fatty acyl group on membrane lipoproteins
GOQ09_RS23390	COG4535	Mg2 and Co2 transporter CorC
GOQ09_RS23400	COG1522	sequence-specific DNA binding
GOQ09_RS23415	COG3186	Phenylalanine-4-hydroxylase
GOQ09_RS23420	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS23480	COG0488	(ABC) transporter
GOQ09_RS23485	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOQ09_RS23530	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS23565	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
GOQ09_RS23595	COG0439	Biotin carboxylase
GOQ09_RS23600	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS23615	COG2124	cytochrome p450
GOQ09_RS23615	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
GOQ09_RS23645	COG1505	serine-type exopeptidase activity
GOQ09_RS23650	COG0010	Belongs to the arginase family
GOQ09_RS23665	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
GOQ09_RS23670	COG0506	proline dehydrogenase activity
GOQ09_RS23670	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOQ09_RS23670	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
GOQ09_RS23725	COG2084	Dehydrogenase
GOQ09_RS23735	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
GOQ09_RS23740	COG0792	nuclease activity
GOQ09_RS23745	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOQ09_RS23755	COG2831	hemolysin activation secretion protein
GOQ09_RS23760	COG3210	domain, Protein
GOQ09_RS23765	COG2197	response regulator
GOQ09_RS23770	COG4585	Histidine kinase
GOQ09_RS23805	COG1309	transcriptional regulator
GOQ09_RS23810	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOQ09_RS23815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
GOQ09_RS23870	COG3118	belongs to the thioredoxin family
GOQ09_RS23875	COG1201	RNA secondary structure unwinding
GOQ09_RS23880	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
GOQ09_RS23880	COG1793	dna ligase
GOQ09_RS23885	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
GOQ09_RS23885	COG1793	dna ligase
GOQ09_RS23900	COG0673	inositol 2-dehydrogenase activity
GOQ09_RS23905	COG1879	ABC-type sugar transport system periplasmic component
GOQ09_RS23910	COG1172	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS23925	COG0355	proton-transporting ATP synthase activity, rotational mechanism
GOQ09_RS23930	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GOQ09_RS23935	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GOQ09_RS23940	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GOQ09_RS23945	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOQ09_RS23950	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GOQ09_RS23960	COG0356	it plays a direct role in the translocation of protons across the membrane
GOQ09_RS23975	COG2921	Belongs to the UPF0250 family
GOQ09_RS23980	COG0321	lipoyl(octanoyl) transferase activity
GOQ09_RS23985	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
GOQ09_RS23990	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS23995	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
GOQ09_RS24015	COG2130	NADP-dependent
GOQ09_RS24025	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS24045	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOQ09_RS24050	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
GOQ09_RS24060	COG2814	Major facilitator Superfamily
GOQ09_RS24070	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
GOQ09_RS24075	COG3909	cytochrome
GOQ09_RS24085	COG0456	acetyltransferase
GOQ09_RS24090	COG0678	peroxiredoxin activity
GOQ09_RS24095	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GOQ09_RS24100	COG0255	Belongs to the universal ribosomal protein uL29 family
GOQ09_RS24105	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GOQ09_RS24110	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GOQ09_RS24115	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GOQ09_RS24120	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GOQ09_RS24125	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GOQ09_RS24130	COG0089	rRNA binding
GOQ09_RS24135	COG0088	Forms part of the polypeptide exit tunnel
GOQ09_RS24140	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GOQ09_RS24155	COG0051	transcription antitermination factor activity, RNA binding
GOQ09_RS24160	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOQ09_RS24165	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOQ09_RS24170	COG0049	tRNA binding
GOQ09_RS24175	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GOQ09_RS24180	COG1686	Belongs to the peptidase S11 family
GOQ09_RS24185	COG2945	thiolester hydrolase activity
GOQ09_RS24200	COG1981	membrane
GOQ09_RS24210	COG0598	Magnesium transport protein CorA
GOQ09_RS24220	COG0583	DNA-binding transcription factor activity
GOQ09_RS24225	COG0412	Dienelactone hydrolase
GOQ09_RS24235	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS24240	COG2095	MarC family integral membrane protein
GOQ09_RS24275	COG0559	Belongs to the binding-protein-dependent transport system permease family
GOQ09_RS24285	COG0657	acetylesterase activity
GOQ09_RS24290	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GOQ09_RS24295	COG1250	3-hydroxyacyl-CoA dehydrogenase
GOQ09_RS24310	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GOQ09_RS24315	COG1652	LysM domain
GOQ09_RS24325	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
GOQ09_RS24340	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOQ09_RS24340	COG0574	Belongs to the PEP-utilizing enzyme family
GOQ09_RS24355	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOQ09_RS24360	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOQ09_RS24370	COG0640	Transcriptional regulator
GOQ09_RS24385	COG0625	glutathione transferase activity
GOQ09_RS24390	COG0583	DNA-binding transcription factor activity
GOQ09_RS24395	COG1131	(ABC) transporter
GOQ09_RS24405	COG1846	Transcriptional regulator
GOQ09_RS24410	COG1764	response to oxidative stress
GOQ09_RS24420	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
GOQ09_RS24430	COG0326	Molecular chaperone. Has ATPase activity
GOQ09_RS24435	COG1840	ABC-type Fe3 transport system, periplasmic component
GOQ09_RS24450	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
GOQ09_RS24475	COG0642	Histidine kinase
GOQ09_RS24490	COG1187	pseudouridine synthase activity
GOQ09_RS24495	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOQ09_RS24515	COG0745	RESPONSE REGULATOR receiver
GOQ09_RS24520	COG2205	protein histidine kinase activity
GOQ09_RS24530	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
GOQ09_RS24535	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
GOQ09_RS24540	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
GOQ09_RS24555	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
GOQ09_RS24580	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS24590	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_RS24595	COG1022	Amp-dependent synthetase and ligase
GOQ09_RS24625	COG0318	PFAM AMP-dependent synthetase and ligase
GOQ09_RS24635	COG0372	Belongs to the citrate synthase family
GOQ09_RS24645	COG0693	protein deglycase activity
GOQ09_RS24670	COG4993	Dehydrogenase
GOQ09_RS24675	COG1940	carbohydrate kinase activity
GOQ09_RS24680	COG1129	ABC transporter
GOQ09_RS24685	COG4214	carbohydrate transport
GOQ09_RS24690	COG4213	ABC transporter substrate-binding protein
GOQ09_RS24700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
GOQ09_RS24705	COG0583	DNA-binding transcription factor activity
GOQ09_RS24710	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
GOQ09_RS24715	COG0022	dehydrogenase e1 component
GOQ09_RS24720	COG1028	Short-chain dehydrogenase reductase Sdr
GOQ09_RS24725	COG0583	DNA-binding transcription factor activity
GOQ09_RS24740	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
GOQ09_RS24755	COG1024	Enoyl-CoA hydratase
GOQ09_RS24760	COG1960	acyl-CoA dehydrogenase activity
GOQ09_RS24780	COG0203	ribosomal protein L17
GOQ09_RS24785	COG0202	RNA polymerase activity
GOQ09_RS24790	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GOQ09_RS24795	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GOQ09_RS24800	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GOQ09_RS24805	COG0257	Belongs to the bacterial ribosomal protein bL36 family
GOQ09_RS24810	COG0201	protein transport
GOQ09_RS24815	COG0200	Binds to the 23S rRNA
GOQ09_RS24820	COG1841	ribosomal large subunit assembly
GOQ09_RS24825	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GOQ09_RS24830	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GOQ09_RS24835	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GOQ09_RS24840	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GOQ09_RS24845	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOQ09_RS24850	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GOQ09_RS24855	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GOQ09_RS24860	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GOQ09_RS24875	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
GOQ09_RS24880	COG0783	Belongs to the Dps family
GOQ09_RS24905	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOQ09_RS24910	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GOQ09_RS24915	COG3386	PFAM SMP-30 Gluconolaconase
GOQ09_RS24920	COG0343	queuine tRNA-ribosyltransferase activity
GOQ09_RS24975	COG0284	orotidine-5'-phosphate decarboxylase activity
GOQ09_RS24990	COG1214	PFAM Peptidase M22, glycoprotease
GOQ09_RS25005	COG0494	nUDIX hydrolase
GOQ09_RS25010	COG2027	D-alanyl-D-alanine carboxypeptidase
GOQ09_RS25020	COG0009	L-threonylcarbamoyladenylate synthase
GOQ09_RS25025	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GOQ09_RS25030	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GOQ09_RS25040	COG3620	sequence-specific DNA binding
GOQ09_RS25045	COG3550	peptidyl-serine autophosphorylation
GOQ09_RS25055	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GOQ09_RS25065	COG1522	sequence-specific DNA binding
GOQ09_RS25070	COG2515	1-aminocyclopropane-1-carboxylate deaminase
GOQ09_RS25090	COG0469	pyruvate kinase activity
GOQ09_RS25095	COG0126	phosphoglycerate kinase activity
GOQ09_RS25100	COG0583	DNA-binding transcription factor activity
GOQ09_RS25115	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
GOQ09_RS25145	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GOQ09_RS25155	COG0242	peptide deformylase activity
GOQ09_RS25165	COG0758	DNA mediated transformation
GOQ09_RS25170	COG2922	Belongs to the Smg family
GOQ09_RS25180	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOQ09_RS25185	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
GOQ09_RS25190	COG1862	Preprotein translocase
GOQ09_RS25200	COG1522	sequence-specific DNA binding
GOQ09_RS25210	COG0765	amino acid transport
GOQ09_RS25215	COG2814	Major facilitator Superfamily
GOQ09_RS25230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
GOQ09_RS25260	COG0251	oxidation-reduction process
GOQ09_RS25270	COG3622	Belongs to the hyi family
GOQ09_RS25275	COG0235	Class ii aldolase
GOQ09_RS25280	COG3395	kinase activity
GOQ09_RS25285	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
GOQ09_RS25290	COG2084	Dehydrogenase
GOQ09_RS25295	COG2271	Major facilitator Superfamily
GOQ09_RS25300	COG2186	Transcriptional regulator
GOQ09_RS25305	COG3210	domain, Protein
GOQ09_RS25315	COG2831	hemolysin activation secretion protein
GOQ09_RS25330	COG1522	sequence-specific DNA binding
GOQ09_RS25355	COG4566	intracellular signal transduction
GOQ09_RS25375	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
GOQ09_RS25380	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
GOQ09_RS25385	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
GOQ09_RS25390	COG1595	DNA-templated transcription, initiation
GOQ09_RS25405	COG0625	glutathione transferase activity
GOQ09_RS25420	COG4772	TonB-dependent receptor
GOQ09_RS25440	COG0861	Integral membrane protein TerC family
GOQ09_RS25450	COG1950	PFAM Membrane protein of
GOQ09_RS25455	COG4783	chaperone-mediated protein folding
GOQ09_RS25460	COG0315	cyclic pyranopterin monophosphate synthase activity
GOQ09_RS25525	COG1716	ATPase activity
GOQ09_RS25530	COG0631	protein serine/threonine phosphatase activity
GOQ09_RS25535	COG0861	Integral membrane protein TerC family
GOQ09_RS25540	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GOQ09_RS25545	COG0045	succinate-CoA ligase (ADP-forming) activity
GOQ09_RS25550	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GOQ09_RS25560	COG2137	regulation of response to DNA damage stimulus
GOQ09_RS25565	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOQ09_RS25580	COG0642	Histidine kinase
GOQ09_RS25590	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
GOQ09_RS25590	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
GOQ09_RS25605	COG0583	DNA-binding transcription factor activity
GOQ09_RS25610	COG3181	Tripartite tricarboxylate transporter family receptor
GOQ09_RS25625	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
GOQ09_RS25640	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GOQ09_RS25645	COG0513	Belongs to the DEAD box helicase family
GOQ09_RS25655	COG0697	spore germination
GOQ09_RS25665	COG1802	Transcriptional regulator
GOQ09_RS25695	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOQ09_RS25700	COG3550	peptidyl-serine autophosphorylation
GOQ09_RS25715	COG1473	amidohydrolase
GOQ09_RS25720	COG1741	Belongs to the pirin family
GOQ09_RS25745	COG1047	Peptidyl-prolyl cis-trans
GOQ09_RS25785	COG1914	H( )-stimulated, divalent metal cation uptake system
GOQ09_RS25790	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
GOQ09_RS25805	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GOQ09_RS25815	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
GOQ09_RS25820	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
GOQ09_RS25825	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
GOQ09_RS25830	COG0006	proline dipeptidase activity
GOQ09_RS25835	COG0583	DNA-binding transcription factor activity
GOQ09_RS25870	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
GOQ09_RS25890	COG0280	phosphate acetyltransferase
GOQ09_RS25890	COG0281	malic enzyme
GOQ09_RS25905	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
GOQ09_RS25910	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
GOQ09_RS25915	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
GOQ09_RS25925	COG1385	rRNA (uridine-N3-)-methyltransferase activity
GOQ09_RS25940	COG2814	Major facilitator Superfamily
GOQ09_RS25945	COG2267	carboxylic ester hydrolase activity
GOQ09_RS25965	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
GOQ09_RS25970	COG1739	Uncharacterized protein family UPF0029
GOQ09_RS25975	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
GOQ09_RS25980	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GOQ09_RS25985	COG2119	membrane
GOQ09_RS25990	COG0724	RNA recognition motif
GOQ09_RS25995	COG4221	oxidoreductase activity
GOQ09_RS26005	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
GOQ09_RS26030	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GOQ09_RS26035	COG0706	membrane insertase activity
GOQ09_RS26040	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
GOQ09_RS26045	COG0594	ribonuclease P activity
GOQ09_RS26050	COG0230	Belongs to the bacterial ribosomal protein bL34 family