locus-tag class description VARPA_RS00005 PF00308 Bacterial dnaA protein VARPA_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix VARPA_RS00005 PF11638 DnaA N-terminal domain VARPA_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain VARPA_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain VARPA_RS00010 PF02767 DNA polymerase III beta subunit, central domain VARPA_RS00015 PF18053 DNA gyrase B subunit insert domain VARPA_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus VARPA_RS00015 PF01751 Toprim domain VARPA_RS00015 PF00204 DNA gyrase B VARPA_RS00040 PF00149 Calcineurin-like phosphoesterase VARPA_RS00055 PF03706 Lysylphosphatidylglycerol synthase TM region VARPA_RS00060 PF13091 PLD-like domain VARPA_RS00065 PF03372 Endonuclease/Exonuclease/phosphatase family VARPA_RS00085 PF02678 Pirin VARPA_RS00085 PF05726 Pirin C-terminal cupin domain VARPA_RS00090 PF03055 Retinal pigment epithelial membrane protein VARPA_RS00095 PF00583 Acetyltransferase (GNAT) family VARPA_RS00100 PF00912 Transglycosylase VARPA_RS00120 PF06123 Inner membrane protein CreD VARPA_RS00125 PF00933 Glycosyl hydrolase family 3 N terminal domain VARPA_RS00130 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS00130 PF17092 Penicillin-binding protein OB-like domain VARPA_RS00130 PF00912 Transglycosylase VARPA_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS00140 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS00140 PF00672 HAMP domain VARPA_RS00145 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS00145 PF00072 Response regulator receiver domain VARPA_RS00155 PF00376 MerR family regulatory protein VARPA_RS00155 PF09278 MerR, DNA binding VARPA_RS00160 PF00403 Heavy-metal-associated domain VARPA_RS00165 PF00403 Heavy-metal-associated domain VARPA_RS00170 PF00583 Acetyltransferase (GNAT) family VARPA_RS00175 PF04116 Fatty acid hydroxylase superfamily VARPA_RS00180 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS00180 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS00185 PF00550 Phosphopantetheine attachment site VARPA_RS00195 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS00195 PF00072 Response regulator receiver domain VARPA_RS00200 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS00205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS00220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VARPA_RS00230 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS00235 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS00235 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS00250 PF13932 GidA associated domain VARPA_RS00250 PF01134 Glucose inhibited division protein A VARPA_RS00255 PF02527 rRNA small subunit methyltransferase G VARPA_RS00260 PF01810 LysE type translocator VARPA_RS00265 PF13614 AAA domain VARPA_RS00275 PF17762 HTH domain found in ParB protein VARPA_RS00275 PF02195 ParB-like nuclease domain VARPA_RS00285 PF02913 FAD linked oxidases, C-terminal domain VARPA_RS00285 PF01565 FAD binding domain VARPA_RS00295 PF01923 Cobalamin adenosyltransferase VARPA_RS00310 PF01638 HxlR-like helix-turn-helix VARPA_RS00330 PF03466 LysR substrate binding domain VARPA_RS00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00360 PF03776 Septum formation topological specificity factor MinE VARPA_RS00365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VARPA_RS00370 PF05209 Septum formation inhibitor MinC, N-terminal domain VARPA_RS00370 PF03775 Septum formation inhibitor MinC, C-terminal domain VARPA_RS00375 PF00860 Permease family VARPA_RS00380 PF03061 Thioesterase superfamily VARPA_RS00390 PF00664 ABC transporter transmembrane region VARPA_RS00390 PF00005 ABC transporter VARPA_RS00405 PF00368 Hydroxymethylglutaryl-coenzyme A reductase VARPA_RS00410 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS00410 PF00155 Aminotransferase class I and II VARPA_RS00415 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS00425 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS00425 PF00501 AMP-binding enzyme VARPA_RS00430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS00430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS00440 PF05853 beta-keto acid cleavage enzyme VARPA_RS00450 PF01361 Tautomerase enzyme VARPA_RS00460 PF03466 LysR substrate binding domain VARPA_RS00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00465 PF00005 ABC transporter VARPA_RS00470 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS00470 PF00005 ABC transporter VARPA_RS00480 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS00490 PF00561 alpha/beta hydrolase fold VARPA_RS00495 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS00495 PF00501 AMP-binding enzyme VARPA_RS00500 PF00171 Aldehyde dehydrogenase family VARPA_RS00510 PF01202 Shikimate kinase VARPA_RS00515 PF07660 Secretin and TonB N terminus short domain VARPA_RS00515 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS00515 PF00593 TonB dependent receptor VARPA_RS00530 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS00540 PF00175 Oxidoreductase NAD-binding domain VARPA_RS00540 PF00970 Oxidoreductase FAD-binding domain VARPA_RS00540 PF00037 4Fe-4S binding domain VARPA_RS00555 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS00555 PF13192 Thioredoxin domain VARPA_RS00570 PF04199 Putative cyclase VARPA_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS00585 PF00005 ABC transporter VARPA_RS00600 PF00501 AMP-binding enzyme VARPA_RS00600 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS00610 PF02743 Cache domain VARPA_RS00610 PF00211 Adenylate and Guanylate cyclase catalytic domain VARPA_RS00610 PF00672 HAMP domain VARPA_RS00615 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA VARPA_RS00630 PF12833 Helix-turn-helix domain VARPA_RS00635 PF03466 LysR substrate binding domain VARPA_RS00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS00640 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS00640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS00645 PF02515 CoA-transferase family III VARPA_RS00675 PF03167 Uracil DNA glycosylase superfamily VARPA_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00690 PF03466 LysR substrate binding domain VARPA_RS00695 PF00795 Carbon-nitrogen hydrolase VARPA_RS00715 PF04960 Glutaminase VARPA_RS00730 PF00893 Small Multidrug Resistance protein VARPA_RS00740 PF01613 Flavin reductase like domain VARPA_RS00745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00745 PF03466 LysR substrate binding domain VARPA_RS00750 PF14863 Alkyl sulfatase dimerisation VARPA_RS00750 PF14864 Alkyl sulfatase C-terminal VARPA_RS00750 PF00753 Metallo-beta-lactamase superfamily VARPA_RS00755 PF07670 Nucleoside recognition VARPA_RS00760 PF13091 PLD-like domain VARPA_RS00775 PF00005 ABC transporter VARPA_RS00780 PF00005 ABC transporter VARPA_RS00780 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS00795 PF13458 Periplasmic binding protein VARPA_RS00800 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS00805 PF00120 Glutamine synthetase, catalytic domain VARPA_RS00810 PF00355 Rieske [2Fe-2S] domain VARPA_RS00820 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS00830 PF03466 LysR substrate binding domain VARPA_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00865 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain VARPA_RS00865 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain VARPA_RS00870 PF13291 ACT domain VARPA_RS00870 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS00875 PF17862 AAA+ lid domain VARPA_RS00875 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS00875 PF06480 FtsH Extracellular VARPA_RS00875 PF01434 Peptidase family M41 VARPA_RS00885 PF01156 Inosine-uridine preferring nucleoside hydrolase VARPA_RS00890 PF09382 RQC domain VARPA_RS00890 PF16124 RecQ zinc-binding VARPA_RS00890 PF00570 HRDC domain VARPA_RS00890 PF00271 Helicase conserved C-terminal domain VARPA_RS00890 PF00270 DEAD/DEAH box helicase VARPA_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS00905 PF00005 ABC transporter VARPA_RS00910 PF07702 UTRA domain VARPA_RS00910 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS00915 PF00221 Aromatic amino acid lyase VARPA_RS00920 PF17392 Urocanase C-terminal domain VARPA_RS00920 PF01175 Urocanase Rossmann-like domain VARPA_RS00920 PF17391 Urocanase N-terminal domain VARPA_RS00930 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS00945 PF05962 HutD VARPA_RS00950 PF01979 Amidohydrolase family VARPA_RS00955 PF01979 Amidohydrolase family VARPA_RS00970 PF02965 Vitamin B12 dependent methionine synthase, activation domain VARPA_RS00970 PF00809 Pterin binding enzyme VARPA_RS00970 PF02310 B12 binding domain VARPA_RS00970 PF02574 Homocysteine S-methyltransferase VARPA_RS00970 PF02607 B12 binding domain VARPA_RS00980 PF03466 LysR substrate binding domain VARPA_RS00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS00995 PF00561 alpha/beta hydrolase fold VARPA_RS01000 PF02574 Homocysteine S-methyltransferase VARPA_RS01000 PF02607 B12 binding domain VARPA_RS01000 PF02310 B12 binding domain VARPA_RS01000 PF02965 Vitamin B12 dependent methionine synthase, activation domain VARPA_RS01000 PF00809 Pterin binding enzyme VARPA_RS01020 PF01979 Amidohydrolase family VARPA_RS01025 PF17938 Tetracyclin repressor-like, C-terminal domain VARPA_RS01025 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS01030 PF00970 Oxidoreductase FAD-binding domain VARPA_RS01030 PF00175 Oxidoreductase NAD-binding domain VARPA_RS01035 PF00037 4Fe-4S binding domain VARPA_RS01055 PF13458 Periplasmic binding protein VARPA_RS01065 PF00005 ABC transporter VARPA_RS01065 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS01070 PF00005 ABC transporter VARPA_RS01075 PF00857 Isochorismatase family VARPA_RS01085 PF01799 [2Fe-2S] binding domain VARPA_RS01085 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS01090 PF00034 Cytochrome c VARPA_RS01090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VARPA_RS01090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS01100 PF13335 Magnesium chelatase, subunit ChlI C-terminal VARPA_RS01100 PF01078 Magnesium chelatase, subunit ChlI VARPA_RS01110 PF00543 Nitrogen regulatory protein P-II VARPA_RS01120 PF00909 Ammonium Transporter Family VARPA_RS01125 PF08450 SMP-30/Gluconolactonase/LRE-like region VARPA_RS01130 PF03466 LysR substrate binding domain VARPA_RS01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01135 PF02913 FAD linked oxidases, C-terminal domain VARPA_RS01135 PF01565 FAD binding domain VARPA_RS01140 PF01565 FAD binding domain VARPA_RS01145 PF13183 4Fe-4S dicluster domain VARPA_RS01145 PF02754 Cysteine-rich domain VARPA_RS01155 PF00255 Glutathione peroxidase VARPA_RS01165 PF07690 Major Facilitator Superfamily VARPA_RS01170 PF00842 Alanine racemase, C-terminal domain VARPA_RS01170 PF01168 Alanine racemase, N-terminal domain VARPA_RS01180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01180 PF03466 LysR substrate binding domain VARPA_RS01190 PF08546 Ketopantoate reductase PanE/ApbA C terminal VARPA_RS01190 PF02558 Ketopantoate reductase PanE/ApbA VARPA_RS01195 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS01200 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01210 PF03328 HpcH/HpaI aldolase/citrate lyase family VARPA_RS01215 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS01235 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01240 PF00171 Aldehyde dehydrogenase family VARPA_RS01245 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01250 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS01260 PF01047 MarR family VARPA_RS01265 PF18073 Rubredoxin metal binding domain VARPA_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01280 PF03466 LysR substrate binding domain VARPA_RS01285 PF07690 Major Facilitator Superfamily VARPA_RS01290 PF01546 Peptidase family M20/M25/M40 VARPA_RS01290 PF07687 Peptidase dimerisation domain VARPA_RS01295 PF04381 Putative exonuclease, RdgC VARPA_RS01300 PF01063 Amino-transferase class IV VARPA_RS01325 PF00672 HAMP domain VARPA_RS01325 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS01330 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS01330 PF00072 Response regulator receiver domain VARPA_RS01335 PF01494 FAD binding domain VARPA_RS01345 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS01345 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS01350 PF07690 Major Facilitator Superfamily VARPA_RS01360 PF01425 Amidase VARPA_RS01365 PF09084 NMT1/THI5 like VARPA_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS01375 PF00005 ABC transporter VARPA_RS01385 PF02608 ABC transporter substrate-binding protein PnrA-like VARPA_RS01395 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS01400 PF00795 Carbon-nitrogen hydrolase VARPA_RS01405 PF00857 Isochorismatase family VARPA_RS01410 PF00005 ABC transporter VARPA_RS01415 PF00857 Isochorismatase family VARPA_RS01420 PF07729 FCD domain VARPA_RS01420 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS01425 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01430 PF01494 FAD binding domain VARPA_RS01435 PF03466 LysR substrate binding domain VARPA_RS01435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01440 PF03372 Endonuclease/Exonuclease/phosphatase family VARPA_RS01445 PF00156 Phosphoribosyl transferase domain VARPA_RS01455 PF02934 GatB/GatE catalytic domain VARPA_RS01455 PF02637 GatB domain VARPA_RS01460 PF01425 Amidase VARPA_RS01465 PF02686 Glu-tRNAGln amidotransferase C subunit VARPA_RS01485 PF03717 Penicillin-binding Protein dimerisation domain VARPA_RS01485 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS01490 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS01495 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01500 PF04209 homogentisate 1,2-dioxygenase VARPA_RS01510 PF01494 FAD binding domain VARPA_RS01515 PF00753 Metallo-beta-lactamase superfamily VARPA_RS01525 PF02146 Sir2 family VARPA_RS01550 PF00005 ABC transporter VARPA_RS01550 PF09383 NIL domain VARPA_RS01555 PF02405 Permease MlaE VARPA_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01560 PF03466 LysR substrate binding domain VARPA_RS01565 PF00171 Aldehyde dehydrogenase family VARPA_RS01575 PF05199 GMC oxidoreductase VARPA_RS01575 PF00732 GMC oxidoreductase VARPA_RS01590 PF04324 BFD-like [2Fe-2S] binding domain VARPA_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS01605 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS01610 PF00005 ABC transporter VARPA_RS01610 PF08402 TOBE domain VARPA_RS01625 PF00171 Aldehyde dehydrogenase family VARPA_RS01635 PF00155 Aminotransferase class I and II VARPA_RS01640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS01640 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS01640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS01650 PF07687 Peptidase dimerisation domain VARPA_RS01650 PF01546 Peptidase family M20/M25/M40 VARPA_RS01655 PF03009 Glycerophosphoryl diester phosphodiesterase family VARPA_RS01660 PF01546 Peptidase family M20/M25/M40 VARPA_RS01660 PF07687 Peptidase dimerisation domain VARPA_RS01665 PF04286 Protein of unknown function (DUF445) VARPA_RS01675 PF03707 Bacterial signalling protein N terminal repeat VARPA_RS01675 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS01675 PF00563 EAL domain VARPA_RS01680 PF01039 Carboxyl transferase domain VARPA_RS01685 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS01685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS01685 PF00364 Biotin-requiring enzyme VARPA_RS01685 PF02785 Biotin carboxylase C-terminal domain VARPA_RS01695 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS01695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS01695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS01700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS01700 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS01700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS01710 PF00271 Helicase conserved C-terminal domain VARPA_RS01710 PF00270 DEAD/DEAH box helicase VARPA_RS01715 PF01253 Translation initiation factor SUI1 VARPA_RS01725 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VARPA_RS01730 PF07331 Tripartite tricarboxylate transporter TctB family VARPA_RS01735 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS01740 PF00909 Ammonium Transporter Family VARPA_RS01755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS01755 PF00384 Molybdopterin oxidoreductase VARPA_RS01755 PF01568 Molydopterin dinucleotide binding domain VARPA_RS01775 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VARPA_RS01775 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS01780 PF00107 Zinc-binding dehydrogenase VARPA_RS01780 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS01785 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS01790 PF00005 ABC transporter VARPA_RS01795 PF13407 Periplasmic binding protein domain VARPA_RS01800 PF02311 AraC-like ligand binding domain VARPA_RS01800 PF12833 Helix-turn-helix domain VARPA_RS01805 PF02515 CoA-transferase family III VARPA_RS01840 PF03466 LysR substrate binding domain VARPA_RS01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS01845 PF07883 Cupin domain VARPA_RS01850 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS01855 PF01494 FAD binding domain VARPA_RS01860 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01865 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS01885 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS01885 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS01890 PF02371 Transposase IS116/IS110/IS902 family VARPA_RS01890 PF01548 Transposase VARPA_RS01900 PF01740 STAS domain VARPA_RS01900 PF00916 Sulfate permease family VARPA_RS01910 PF00005 ABC transporter VARPA_RS01915 PF00005 ABC transporter VARPA_RS01915 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS01920 PF11862 Domain of unknown function (DUF3382) VARPA_RS01920 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS01925 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS01935 PF00137 ATP synthase subunit C VARPA_RS01945 PF01791 DeoC/LacD family aldolase VARPA_RS01950 PF00248 Aldo/keto reductase family VARPA_RS01955 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS01960 PF00005 ABC transporter VARPA_RS01970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS01970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VARPA_RS01975 PF01266 FAD dependent oxidoreductase VARPA_RS01975 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VARPA_RS01980 PF07702 UTRA domain VARPA_RS01980 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS01990 PF17760 UvrA interaction domain VARPA_RS01990 PF17755 UvrA DNA-binding domain VARPA_RS01995 PF00436 Single-strand binding protein family VARPA_RS02000 PF17200 Single Cache domain 2 VARPA_RS02000 PF07730 Histidine kinase VARPA_RS02010 PF01709 Transcriptional regulator VARPA_RS02015 PF02548 Ketopantoate hydroxymethyltransferase VARPA_RS02020 PF00005 ABC transporter VARPA_RS02030 PF02632 BioY family VARPA_RS02065 PF00296 Luciferase-like monooxygenase VARPA_RS02085 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS02085 PF00072 Response regulator receiver domain VARPA_RS02090 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VARPA_RS02090 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VARPA_RS02095 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VARPA_RS02100 PF02233 NAD(P) transhydrogenase beta subunit VARPA_RS02105 PF00501 AMP-binding enzyme VARPA_RS02105 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS02110 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS02115 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS02115 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS02120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS02120 PF00005 ABC transporter VARPA_RS02125 PF00005 ABC transporter VARPA_RS02125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS02130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS02135 PF01048 Phosphorylase superfamily VARPA_RS02145 PF01544 CorA-like Mg2+ transporter protein VARPA_RS02150 PF00580 UvrD/REP helicase N-terminal domain VARPA_RS02150 PF13361 UvrD-like helicase C-terminal domain VARPA_RS02155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VARPA_RS02160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VARPA_RS02165 PF02603 HPr Serine kinase N terminus VARPA_RS02165 PF07475 HPr Serine kinase C-terminal domain VARPA_RS02170 PF01475 Ferric uptake regulator family VARPA_RS02175 PF04355 SmpA / OmlA family VARPA_RS02180 PF01113 Dihydrodipicolinate reductase, N-terminus VARPA_RS02180 PF05173 Dihydrodipicolinate reductase, C-terminus VARPA_RS02185 PF01618 MotA/TolQ/ExbB proton channel family VARPA_RS02190 PF02472 Biopolymer transport protein ExbD/TolR VARPA_RS02195 PF00343 Carbohydrate phosphorylase VARPA_RS02200 PF08323 Starch synthase catalytic domain VARPA_RS02200 PF00534 Glycosyl transferases group 1 VARPA_RS02205 PF00483 Nucleotidyl transferase VARPA_RS02210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VARPA_RS02210 PF18390 Glycogen debranching enzyme C-terminal domain VARPA_RS02210 PF00128 Alpha amylase, catalytic domain VARPA_RS02215 PF02806 Alpha amylase, C-terminal all-beta domain VARPA_RS02215 PF00128 Alpha amylase, catalytic domain VARPA_RS02215 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VARPA_RS02220 PF00128 Alpha amylase, catalytic domain VARPA_RS02225 PF13454 FAD-NAD(P)-binding VARPA_RS02230 PF13603 Leucyl-tRNA synthetase, Domain 2 VARPA_RS02230 PF09334 tRNA synthetases class I (M) VARPA_RS02230 PF08264 Anticodon-binding domain of tRNA VARPA_RS02230 PF00133 tRNA synthetases class I (I, L, M and V) VARPA_RS02245 PF00171 Aldehyde dehydrogenase family VARPA_RS02255 PF02705 K+ potassium transporter VARPA_RS02270 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VARPA_RS02270 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VARPA_RS02280 PF00593 TonB dependent receptor VARPA_RS02280 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS02285 PF13230 Glutamine amidotransferases class-II VARPA_RS02295 PF07690 Major Facilitator Superfamily VARPA_RS02300 PF10005 zinc-ribbon domain VARPA_RS02300 PF15887 Putative zinc-binding metallo-peptidase VARPA_RS02310 PF00365 Phosphofructokinase VARPA_RS02315 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS02325 PF03466 LysR substrate binding domain VARPA_RS02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS02330 PF02469 Fasciclin domain VARPA_RS02345 PF17761 DUF1016 N-terminal domain VARPA_RS02345 PF06250 YhcG PDDEXK nuclease domain VARPA_RS02355 PF01274 Malate synthase VARPA_RS02360 PF00155 Aminotransferase class I and II VARPA_RS02370 PF00682 HMGL-like VARPA_RS02375 PF02515 CoA-transferase family III VARPA_RS02380 PF03466 LysR substrate binding domain VARPA_RS02380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS02395 PF03485 Arginyl tRNA synthetase N terminal domain VARPA_RS02395 PF00750 tRNA synthetases class I (R) VARPA_RS02395 PF05746 DALR anticodon binding domain VARPA_RS02405 PF01323 DSBA-like thioredoxin domain VARPA_RS02405 PF00085 Thioredoxin VARPA_RS02410 PF03968 OstA-like protein VARPA_RS02415 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS02415 PF00005 ABC transporter VARPA_RS02420 PF04963 Sigma-54 factor, core binding domain VARPA_RS02420 PF04552 Sigma-54, DNA binding domain VARPA_RS02420 PF00309 Sigma-54 factor, Activator interacting domain (AID) VARPA_RS02425 PF13091 PLD-like domain VARPA_RS02445 PF01292 Prokaryotic cytochrome b561 VARPA_RS02450 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS02450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS02455 PF01170 Putative RNA methylase family UPF0020 VARPA_RS02455 PF02926 THUMP domain VARPA_RS02470 PF12833 Helix-turn-helix domain VARPA_RS02500 PF00263 Bacterial type II and III secretion system protein VARPA_RS02500 PF11741 AMIN domain VARPA_RS02500 PF03958 Bacterial type II/III secretion system short domain VARPA_RS02500 PF07660 Secretin and TonB N terminus short domain VARPA_RS02505 PF00437 Type II/IV secretion system protein VARPA_RS02545 PF01645 Conserved region in glutamate synthase VARPA_RS02550 PF03695 Uncharacterised protein family (UPF0149) VARPA_RS02550 PF02810 SEC-C motif VARPA_RS02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS02570 PF03466 LysR substrate binding domain VARPA_RS02580 PF02464 Competence-damaged protein VARPA_RS02590 PF07690 Major Facilitator Superfamily VARPA_RS02595 PF01494 FAD binding domain VARPA_RS02600 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS02605 PF03466 LysR substrate binding domain VARPA_RS02615 PF02769 AIR synthase related protein, C-terminal domain VARPA_RS02615 PF00586 AIR synthase related protein, N-terminal domain VARPA_RS02620 PF04107 Glutamate-cysteine ligase family 2(GCS2) VARPA_RS02635 PF04379 ApaG domain VARPA_RS02640 PF00834 Ribulose-phosphate 3 epimerase family VARPA_RS02655 PF02735 Ku70/Ku80 beta-barrel domain VARPA_RS02660 PF04679 ATP dependent DNA ligase C terminal region VARPA_RS02660 PF13298 DNA polymerase Ligase (LigD) VARPA_RS02660 PF01068 ATP dependent DNA ligase domain VARPA_RS02670 PF00199 Catalase VARPA_RS02670 PF18011 C-terminal domain found in long catalases VARPA_RS02670 PF06628 Catalase-related immune-responsive VARPA_RS02680 PF13396 Phospholipase_D-nuclease N-terminal VARPA_RS02680 PF13091 PLD-like domain VARPA_RS02685 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS02685 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS02700 PF05860 haemagglutination activity domain VARPA_RS02715 PF00857 Isochorismatase family VARPA_RS02720 PF12833 Helix-turn-helix domain VARPA_RS02720 PF01965 DJ-1/PfpI family VARPA_RS02725 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB VARPA_RS02725 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS02725 PF00672 HAMP domain VARPA_RS02725 PF08448 PAS fold VARPA_RS02735 PF00672 HAMP domain VARPA_RS02735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS02735 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS02735 PF01627 Hpt domain VARPA_RS02735 PF00072 Response regulator receiver domain VARPA_RS02750 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VARPA_RS02755 PF00691 OmpA family VARPA_RS02755 PF13677 Membrane MotB of proton-channel complex MotA/MotB VARPA_RS02760 PF06744 Type VI secretion protein IcmF C-terminal VARPA_RS02760 PF06761 Intracellular multiplication and human macrophage-killing VARPA_RS02760 PF14331 ImcF-related N-terminal domain VARPA_RS02770 PF00069 Protein kinase domain VARPA_RS02800 PF07024 ImpE protein VARPA_RS02805 PF04965 Gene 25-like lysozyme VARPA_RS02810 PF05947 Type VI secretion system, TssF VARPA_RS02825 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS02825 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS02825 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS02825 PF17871 AAA lid domain VARPA_RS02830 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS02830 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS02855 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS02855 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS02875 PF13665 Domain of unknown function (DUF4150) VARPA_RS02875 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 VARPA_RS02905 PF05638 Type VI secretion system effector, Hcp VARPA_RS02910 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VARPA_RS02915 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 VARPA_RS02920 PF06812 ImpA, N-terminal, type VI secretion system VARPA_RS02940 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS02940 PF00072 Response regulator receiver domain VARPA_RS02955 PF00586 AIR synthase related protein, N-terminal domain VARPA_RS02955 PF02769 AIR synthase related protein, C-terminal domain VARPA_RS02970 PF00795 Carbon-nitrogen hydrolase VARPA_RS02980 PF00155 Aminotransferase class I and II VARPA_RS02980 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS02990 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS02995 PF00072 Response regulator receiver domain VARPA_RS02995 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS03000 PF00989 PAS fold VARPA_RS03000 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS03000 PF11808 Phosphate regulon sensor protein PhoR VARPA_RS03005 PF01037 Lrp/AsnC ligand binding domain VARPA_RS03010 PF00202 Aminotransferase class-III VARPA_RS03015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS03030 PF01266 FAD dependent oxidoreductase VARPA_RS03035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS03040 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS03045 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS03045 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS03050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS03050 PF00005 ABC transporter VARPA_RS03055 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS03060 PF00171 Aldehyde dehydrogenase family VARPA_RS03070 PF00171 Aldehyde dehydrogenase family VARPA_RS03075 PF01266 FAD dependent oxidoreductase VARPA_RS03080 PF00583 Acetyltransferase (GNAT) family VARPA_RS03085 PF01266 FAD dependent oxidoreductase VARPA_RS03090 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS03090 PF00593 TonB dependent receptor VARPA_RS03105 PF00202 Aminotransferase class-III VARPA_RS03110 PF01037 Lrp/AsnC ligand binding domain VARPA_RS03115 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS03125 PF00425 chorismate binding enzyme VARPA_RS03125 PF04715 Anthranilate synthase component I, N terminal region VARPA_RS03135 PF00117 Glutamine amidotransferase class-I VARPA_RS03140 PF01212 Beta-eliminating lyase VARPA_RS03145 PF01810 LysE type translocator VARPA_RS03150 PF00591 Glycosyl transferase family, a/b domain VARPA_RS03150 PF02885 Glycosyl transferase family, helical bundle domain VARPA_RS03155 PF00218 Indole-3-glycerol phosphate synthase VARPA_RS03160 PF03167 Uracil DNA glycosylase superfamily VARPA_RS03180 PF00009 Elongation factor Tu GTP binding domain VARPA_RS03180 PF03144 Elongation factor Tu domain 2 VARPA_RS03180 PF03143 Elongation factor Tu C-terminal domain VARPA_RS03195 PF02357 Transcription termination factor nusG VARPA_RS03195 PF00467 KOW motif VARPA_RS03200 PF03946 Ribosomal protein L11, N-terminal domain VARPA_RS03200 PF00298 Ribosomal protein L11, RNA binding domain VARPA_RS03205 PF00687 Ribosomal protein L1p/L10e family VARPA_RS03210 PF00466 Ribosomal protein L10 VARPA_RS03215 PF16320 Ribosomal protein L7/L12 dimerisation domain VARPA_RS03215 PF00542 Ribosomal protein L7/L12 C-terminal domain VARPA_RS03220 PF04563 RNA polymerase beta subunit VARPA_RS03220 PF04561 RNA polymerase Rpb2, domain 2 VARPA_RS03220 PF04565 RNA polymerase Rpb2, domain 3 VARPA_RS03220 PF00562 RNA polymerase Rpb2, domain 6 VARPA_RS03220 PF04560 RNA polymerase Rpb2, domain 7 VARPA_RS03220 PF10385 RNA polymerase beta subunit external 1 domain VARPA_RS03225 PF04997 RNA polymerase Rpb1, domain 1 VARPA_RS03225 PF00623 RNA polymerase Rpb1, domain 2 VARPA_RS03225 PF04983 RNA polymerase Rpb1, domain 3 VARPA_RS03225 PF05000 RNA polymerase Rpb1, domain 4 VARPA_RS03225 PF04998 RNA polymerase Rpb1, domain 5 VARPA_RS03235 PF01029 NusB family VARPA_RS03235 PF01189 16S rRNA methyltransferase RsmB/F VARPA_RS03245 PF00989 PAS fold VARPA_RS03245 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS03245 PF00672 HAMP domain VARPA_RS03250 PF00072 Response regulator receiver domain VARPA_RS03250 PF00158 Sigma-54 interaction domain VARPA_RS03250 PF02954 Bacterial regulatory protein, Fis family VARPA_RS03270 PF02463 RecF/RecN/SMC N terminal domain VARPA_RS03355 PF00589 Phage integrase family VARPA_RS03355 PF14659 Phage integrase, N-terminal SAM-like domain VARPA_RS03355 PF13356 Arm DNA-binding domain VARPA_RS03390 PF03705 CheR methyltransferase, all-alpha domain VARPA_RS03390 PF08448 PAS fold VARPA_RS03390 PF01339 CheB methylesterase VARPA_RS03390 PF01739 CheR methyltransferase, SAM binding domain VARPA_RS03425 PF02585 GlcNAc-PI de-N-acetylase VARPA_RS03425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VARPA_RS03445 PF03167 Uracil DNA glycosylase superfamily VARPA_RS03465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS03465 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS03485 PF01470 Pyroglutamyl peptidase VARPA_RS03490 PF03746 LamB/YcsF family VARPA_RS03495 PF02682 Carboxyltransferase domain, subdomain C and D VARPA_RS03500 PF02785 Biotin carboxylase C-terminal domain VARPA_RS03500 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS03500 PF00364 Biotin-requiring enzyme VARPA_RS03500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS03505 PF00561 alpha/beta hydrolase fold VARPA_RS03520 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS03530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VARPA_RS03530 PF13360 PQQ-like domain VARPA_RS03535 PF12706 Beta-lactamase superfamily domain VARPA_RS03540 PF03070 TENA/THI-4/PQQC family VARPA_RS03545 PF05402 Coenzyme PQQ synthesis protein D (PqqD) VARPA_RS03550 PF13186 Iron-sulfur cluster-binding domain VARPA_RS03550 PF04055 Radical SAM superfamily VARPA_RS03555 PF00561 alpha/beta hydrolase fold VARPA_RS03565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS03570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VARPA_RS03575 PF01220 Dehydroquinase class II VARPA_RS03580 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS03585 PF09339 IclR helix-turn-helix domain VARPA_RS03585 PF01614 Bacterial transcriptional regulator VARPA_RS03590 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS03595 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS03600 PF12833 Helix-turn-helix domain VARPA_RS03615 PF17991 Thioredoxin like C-terminal domain VARPA_RS03615 PF00578 AhpC/TSA family VARPA_RS03615 PF02683 Cytochrome C biogenesis protein transmembrane region VARPA_RS03620 PF00072 Response regulator receiver domain VARPA_RS03620 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS03625 PF02566 OsmC-like protein VARPA_RS03630 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS03630 PF00672 HAMP domain VARPA_RS03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS03635 PF00578 AhpC/TSA family VARPA_RS03635 PF17991 Thioredoxin like C-terminal domain VARPA_RS03635 PF02683 Cytochrome C biogenesis protein transmembrane region VARPA_RS03650 PF00375 Sodium:dicarboxylate symporter family VARPA_RS03655 PF00108 Thiolase, N-terminal domain VARPA_RS03655 PF02803 Thiolase, C-terminal domain VARPA_RS03660 PF00106 short chain dehydrogenase VARPA_RS03665 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS03665 PF02743 Cache domain VARPA_RS03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS03670 PF00158 Sigma-54 interaction domain VARPA_RS03670 PF00072 Response regulator receiver domain VARPA_RS03670 PF02954 Bacterial regulatory protein, Fis family VARPA_RS03675 PF02540 NAD synthase VARPA_RS03680 PF02253 Phospholipase A1 VARPA_RS03690 PF00580 UvrD/REP helicase N-terminal domain VARPA_RS03690 PF13361 UvrD-like helicase C-terminal domain VARPA_RS03695 PF03547 Membrane transport protein VARPA_RS03715 PF17764 3′ DNA-binding domain (3′BD) VARPA_RS03715 PF18074 Primosomal protein N C-terminal domain VARPA_RS03715 PF00271 Helicase conserved C-terminal domain VARPA_RS03715 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VARPA_RS03715 PF00270 DEAD/DEAH box helicase VARPA_RS03720 PF01208 Uroporphyrinogen decarboxylase (URO-D) VARPA_RS03725 PF07690 Major Facilitator Superfamily VARPA_RS03730 PF00578 AhpC/TSA family VARPA_RS03735 PF13098 Thioredoxin-like domain VARPA_RS03735 PF11412 Disulphide bond corrector protein DsbC VARPA_RS03735 PF02683 Cytochrome C biogenesis protein transmembrane region VARPA_RS03740 PF02272 DHHA1 domain VARPA_RS03740 PF01411 tRNA synthetases class II (A) VARPA_RS03740 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VARPA_RS03745 PF07995 Glucose / Sorbosone dehydrogenase VARPA_RS03750 PF13302 Acetyltransferase (GNAT) domain VARPA_RS03760 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS03760 PF00107 Zinc-binding dehydrogenase VARPA_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS03765 PF03466 LysR substrate binding domain VARPA_RS03770 PF00106 short chain dehydrogenase VARPA_RS03775 PF02633 Creatinine amidohydrolase VARPA_RS03780 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS03785 PF01810 LysE type translocator VARPA_RS03795 PF02567 Phenazine biosynthesis-like protein VARPA_RS03800 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS03800 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS03805 PF01810 LysE type translocator VARPA_RS03810 PF00155 Aminotransferase class I and II VARPA_RS03815 PF00892 EamA-like transporter family VARPA_RS03825 PF00155 Aminotransferase class I and II VARPA_RS03840 PF01266 FAD dependent oxidoreductase VARPA_RS03845 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS03850 PF04321 RmlD substrate binding domain VARPA_RS03855 PF00483 Nucleotidyl transferase VARPA_RS03860 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS03865 PF00483 Nucleotidyl transferase VARPA_RS03875 PF13439 Glycosyltransferase Family 4 VARPA_RS03875 PF00534 Glycosyl transferases group 1 VARPA_RS03880 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VARPA_RS03885 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS03890 PF00535 Glycosyl transferase family 2 VARPA_RS03895 PF00534 Glycosyl transferases group 1 VARPA_RS03895 PF00535 Glycosyl transferase family 2 VARPA_RS03915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VARPA_RS03925 PF00534 Glycosyl transferases group 1 VARPA_RS03925 PF13439 Glycosyltransferase Family 4 VARPA_RS03930 PF01757 Acyltransferase family VARPA_RS03945 PF00005 ABC transporter VARPA_RS03950 PF01061 ABC-2 type transporter VARPA_RS03960 PF00535 Glycosyl transferase family 2 VARPA_RS03965 PF01757 Acyltransferase family VARPA_RS03975 PF00953 Glycosyl transferase family 4 VARPA_RS03980 PF00696 Amino acid kinase family VARPA_RS03985 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS03990 PF02615 Malate/L-lactate dehydrogenase VARPA_RS04000 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS04005 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS04010 PF00005 ABC transporter VARPA_RS04015 PF13407 Periplasmic binding protein domain VARPA_RS04020 PF08666 SAF domain VARPA_RS04020 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VARPA_RS04025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS04035 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS04040 PF07729 FCD domain VARPA_RS04040 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS04055 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS04065 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS04065 PF07702 UTRA domain VARPA_RS04070 PF13458 Periplasmic binding protein VARPA_RS04075 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS04080 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS04080 PF11862 Domain of unknown function (DUF3382) VARPA_RS04085 PF00005 ABC transporter VARPA_RS04085 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS04090 PF00005 ABC transporter VARPA_RS04095 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS04100 PF00330 Aconitase family (aconitate hydratase) VARPA_RS04105 PF00694 Aconitase C-terminal domain VARPA_RS04110 PF02538 Hydantoinase B/oxoprolinase VARPA_RS04115 PF05378 Hydantoinase/oxoprolinase N-terminal region VARPA_RS04115 PF01968 Hydantoinase/oxoprolinase VARPA_RS04125 PF00890 FAD binding domain VARPA_RS04135 PF03466 LysR substrate binding domain VARPA_RS04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04140 PF00106 short chain dehydrogenase VARPA_RS04145 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS04145 PF00593 TonB dependent receptor VARPA_RS04165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS04165 PF12806 Acetyl-CoA dehydrogenase C-terminal like VARPA_RS04165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS04165 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS04175 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS04175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS04175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS04180 PF04480 Protein of unknown function (DUF559) VARPA_RS04185 PF02803 Thiolase, C-terminal domain VARPA_RS04185 PF00108 Thiolase, N-terminal domain VARPA_RS04200 PF00106 short chain dehydrogenase VARPA_RS04205 PF01323 DSBA-like thioredoxin domain VARPA_RS04210 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS04215 PF13458 Periplasmic binding protein VARPA_RS04220 PF03061 Thioesterase superfamily VARPA_RS04225 PF00005 ABC transporter VARPA_RS04225 PF00664 ABC transporter transmembrane region VARPA_RS04230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS04230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS04235 PF01425 Amidase VARPA_RS04240 PF03466 LysR substrate binding domain VARPA_RS04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04245 PF00206 Lyase VARPA_RS04245 PF10415 Fumarase C C-terminus VARPA_RS04250 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS04255 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS04260 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS04265 PF00005 ABC transporter VARPA_RS04270 PF01156 Inosine-uridine preferring nucleoside hydrolase VARPA_RS04275 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS04280 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VARPA_RS04280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS04285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VARPA_RS04290 PF03466 LysR substrate binding domain VARPA_RS04290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04295 PF00248 Aldo/keto reductase family VARPA_RS04300 PF07690 Major Facilitator Superfamily VARPA_RS04315 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VARPA_RS04325 PF01272 Transcription elongation factor, GreA/GreB, C-term VARPA_RS04325 PF03449 Transcription elongation factor, N-terminal VARPA_RS04335 PF03060 Nitronate monooxygenase VARPA_RS04340 PF00766 Electron transfer flavoprotein FAD-binding domain VARPA_RS04340 PF01012 Electron transfer flavoprotein domain VARPA_RS04345 PF01012 Electron transfer flavoprotein domain VARPA_RS04350 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS04355 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS04355 PF00501 AMP-binding enzyme VARPA_RS04360 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS04365 PF02515 CoA-transferase family III VARPA_RS04370 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS04375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS04375 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS04375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS04380 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS04380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS04380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS04385 PF02803 Thiolase, C-terminal domain VARPA_RS04385 PF00108 Thiolase, N-terminal domain VARPA_RS04390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS04390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS04390 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS04395 PF03466 LysR substrate binding domain VARPA_RS04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04405 PF01161 Phosphatidylethanolamine-binding protein VARPA_RS04420 PF03167 Uracil DNA glycosylase superfamily VARPA_RS04425 PF04115 Ureidoglycolate lyase VARPA_RS04435 PF01425 Amidase VARPA_RS04440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS04440 PF00005 ABC transporter VARPA_RS04445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS04445 PF00005 ABC transporter VARPA_RS04450 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS04450 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS04460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS04470 PF01979 Amidohydrolase family VARPA_RS04490 PF01435 Peptidase family M48 VARPA_RS04500 PF01613 Flavin reductase like domain VARPA_RS04515 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS04520 PF03595 Voltage-dependent anion channel VARPA_RS04530 PF01047 MarR family VARPA_RS04535 PF04632 Fusaric acid resistance protein family VARPA_RS04540 PF07869 Protein of unknown function (DUF1656) VARPA_RS04545 PF13533 Biotin-lipoyl like VARPA_RS04550 PF02321 Outer membrane efflux protein VARPA_RS04555 PF07690 Major Facilitator Superfamily VARPA_RS04565 PF00849 RNA pseudouridylate synthase VARPA_RS04565 PF01479 S4 domain VARPA_RS04575 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS04590 PF01979 Amidohydrolase family VARPA_RS04630 PF03466 LysR substrate binding domain VARPA_RS04630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04635 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS04640 PF02426 Muconolactone delta-isomerase VARPA_RS04645 PF00857 Isochorismatase family VARPA_RS04665 PF12833 Helix-turn-helix domain VARPA_RS04665 PF12852 Cupin VARPA_RS04685 PF12852 Cupin VARPA_RS04685 PF12833 Helix-turn-helix domain VARPA_RS04695 PF00248 Aldo/keto reductase family VARPA_RS04700 PF07690 Major Facilitator Superfamily VARPA_RS04730 PF04542 Sigma-70 region 2 VARPA_RS04730 PF08281 Sigma-70, region 4 VARPA_RS04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS04750 PF03466 LysR substrate binding domain VARPA_RS04755 PF00857 Isochorismatase family VARPA_RS04765 PF13382 Adenine deaminase C-terminal domain VARPA_RS04765 PF01979 Amidohydrolase family VARPA_RS04770 PF07681 DoxX VARPA_RS04775 PF07690 Major Facilitator Superfamily VARPA_RS04780 PF01678 Diaminopimelate epimerase VARPA_RS04795 PF02899 Phage integrase, N-terminal SAM-like domain VARPA_RS04795 PF00589 Phage integrase family VARPA_RS04800 PF10672 S-adenosylmethionine-dependent methyltransferase VARPA_RS04800 PF17785 PUA-like domain VARPA_RS04805 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS04805 PF07683 Cobalamin synthesis protein cobW C-terminal domain VARPA_RS04820 PF01258 Prokaryotic dksA/traR C4-type zinc finger VARPA_RS04830 PF00227 Proteasome subunit VARPA_RS04835 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS04840 PF02381 MraZ protein, putative antitoxin-like VARPA_RS04845 PF01795 MraW methylase family VARPA_RS04855 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS04855 PF03717 Penicillin-binding Protein dimerisation domain VARPA_RS04860 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS04860 PF08245 Mur ligase middle domain VARPA_RS04865 PF08245 Mur ligase middle domain VARPA_RS04865 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS04865 PF01225 Mur ligase family, catalytic domain VARPA_RS04870 PF00953 Glycosyl transferase family 4 VARPA_RS04870 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VARPA_RS04875 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS04875 PF08245 Mur ligase middle domain VARPA_RS04880 PF01098 Cell cycle protein VARPA_RS04885 PF03033 Glycosyltransferase family 28 N-terminal domain VARPA_RS04885 PF04101 Glycosyltransferase family 28 C-terminal domain VARPA_RS04890 PF01225 Mur ligase family, catalytic domain VARPA_RS04890 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS04890 PF08245 Mur ligase middle domain VARPA_RS04895 PF01820 D-ala D-ala ligase N-terminus VARPA_RS04895 PF07478 D-ala D-ala ligase C-terminus VARPA_RS04900 PF08478 POTRA domain, FtsQ-type VARPA_RS04900 PF03799 Cell division protein FtsQ VARPA_RS04905 PF02491 SHS2 domain inserted in FTSA VARPA_RS04910 PF12327 FtsZ family, C-terminal domain VARPA_RS04910 PF00091 Tubulin/FtsZ family, GTPase domain VARPA_RS04915 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VARPA_RS04920 PF02075 Crossover junction endodeoxyribonuclease RuvC VARPA_RS04940 PF00912 Transglycosylase VARPA_RS04945 PF08501 Shikimate dehydrogenase substrate binding domain VARPA_RS04945 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VARPA_RS04945 PF01488 Shikimate / quinate 5-dehydrogenase VARPA_RS04955 PF17876 Cold shock domain VARPA_RS04955 PF08206 Ribonuclease B OB domain VARPA_RS04955 PF00773 RNB domain VARPA_RS04955 PF00575 S1 RNA binding domain VARPA_RS04960 PF05728 Uncharacterised protein family (UPF0227) VARPA_RS04965 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS04965 PF00072 Response regulator receiver domain VARPA_RS04970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS04970 PF00672 HAMP domain VARPA_RS04970 PF07730 Histidine kinase VARPA_RS04975 PF01098 Cell cycle protein VARPA_RS04980 PF01523 Putative modulator of DNA gyrase VARPA_RS04990 PF00793 DAHP synthetase I family VARPA_RS05000 PF01225 Mur ligase family, catalytic domain VARPA_RS05000 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS05000 PF08245 Mur ligase middle domain VARPA_RS05010 PF00578 AhpC/TSA family VARPA_RS05015 PF00364 Biotin-requiring enzyme VARPA_RS05020 PF02785 Biotin carboxylase C-terminal domain VARPA_RS05020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS05020 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS05035 PF00294 pfkB family carbohydrate kinase VARPA_RS05045 PF00268 Ribonucleotide reductase, small chain VARPA_RS05050 PF02867 Ribonucleotide reductase, barrel domain VARPA_RS05050 PF03477 ATP cone domain VARPA_RS05050 PF00317 Ribonucleotide reductase, all-alpha domain VARPA_RS05055 PF01510 N-acetylmuramoyl-L-alanine amidase VARPA_RS05060 PF00158 Sigma-54 interaction domain VARPA_RS05060 PF00072 Response regulator receiver domain VARPA_RS05060 PF02954 Bacterial regulatory protein, Fis family VARPA_RS05065 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS05075 PF01578 Cytochrome C assembly protein VARPA_RS05080 PF02978 Signal peptide binding domain VARPA_RS05080 PF02881 SRP54-type protein, helical bundle domain VARPA_RS05080 PF00448 SRP54-type protein, GTPase domain VARPA_RS05085 PF00535 Glycosyl transferase family 2 VARPA_RS05090 PF00158 Sigma-54 interaction domain VARPA_RS05090 PF00072 Response regulator receiver domain VARPA_RS05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS05100 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS05105 PF04055 Radical SAM superfamily VARPA_RS05105 PF00919 Uncharacterized protein family UPF0004 VARPA_RS05105 PF01938 TRAM domain VARPA_RS05115 PF13533 Biotin-lipoyl like VARPA_RS05120 PF00873 AcrB/AcrD/AcrF family VARPA_RS05145 PF00300 Histidine phosphatase superfamily (branch 1) VARPA_RS05155 PF01171 PP-loop family VARPA_RS05180 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VARPA_RS05190 PF00005 ABC transporter VARPA_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05200 PF17263 Family of unknown function (DUF5329) VARPA_RS05205 PF00459 Inositol monophosphatase family VARPA_RS05215 PF00480 ROK family VARPA_RS05230 PF00155 Aminotransferase class I and II VARPA_RS05230 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS05240 PF00982 Glycosyltransferase family 20 VARPA_RS05245 PF00723 Glycosyl hydrolases family 15 VARPA_RS05250 PF02358 Trehalose-phosphatase VARPA_RS05255 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS05260 PF12627 Probable RNA and SrmB- binding site of polymerase A VARPA_RS05260 PF01743 Poly A polymerase head domain VARPA_RS05260 PF01966 HD domain VARPA_RS05270 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS05270 PF14497 Glutathione S-transferase, C-terminal domain VARPA_RS05275 PF02308 MgtC family VARPA_RS05280 PF14718 Soluble lytic murein transglycosylase L domain VARPA_RS05280 PF01464 Transglycosylase SLT domain VARPA_RS05285 PF01812 5-formyltetrahydrofolate cyclo-ligase family VARPA_RS05290 PF03466 LysR substrate binding domain VARPA_RS05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS05305 PF13545 Crp-like helix-turn-helix domain VARPA_RS05305 PF00027 Cyclic nucleotide-binding domain VARPA_RS05315 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS05315 PF12804 MobA-like NTP transferase domain VARPA_RS05320 PF01037 Lrp/AsnC ligand binding domain VARPA_RS05325 PF01380 SIS domain VARPA_RS05330 PF00202 Aminotransferase class-III VARPA_RS05340 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05355 PF08402 TOBE domain VARPA_RS05355 PF00005 ABC transporter VARPA_RS05360 PF01037 Lrp/AsnC ligand binding domain VARPA_RS05375 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS05380 PF00005 ABC transporter VARPA_RS05385 PF13407 Periplasmic binding protein domain VARPA_RS05390 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS05395 PF00294 pfkB family carbohydrate kinase VARPA_RS05400 PF05025 RbsD / FucU transport protein family VARPA_RS05405 PF00171 Aldehyde dehydrogenase family VARPA_RS05410 PF01791 DeoC/LacD family aldolase VARPA_RS05415 PF08220 DeoR-like helix-turn-helix domain VARPA_RS05415 PF00455 DeoR C terminal sensor domain VARPA_RS05420 PF13404 AsnC-type helix-turn-helix domain VARPA_RS05420 PF01037 Lrp/AsnC ligand binding domain VARPA_RS05435 PF02563 Polysaccharide biosynthesis/export protein VARPA_RS05435 PF10531 SLBB domain VARPA_RS05440 PF01451 Low molecular weight phosphotyrosine protein phosphatase VARPA_RS05445 PF13807 G-rich domain on putative tyrosine kinase VARPA_RS05445 PF02706 Chain length determinant protein VARPA_RS05445 PF13614 AAA domain VARPA_RS05450 PF02397 Bacterial sugar transferase VARPA_RS05465 PF13439 Glycosyltransferase Family 4 VARPA_RS05465 PF00534 Glycosyl transferases group 1 VARPA_RS05490 PF01619 Proline dehydrogenase VARPA_RS05490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VARPA_RS05490 PF00171 Aldehyde dehydrogenase family VARPA_RS05490 PF14850 DNA-binding domain of Proline dehydrogenase VARPA_RS05510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VARPA_RS05515 PF08245 Mur ligase middle domain VARPA_RS05515 PF01225 Mur ligase family, catalytic domain VARPA_RS05515 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS05525 PF01263 Aldose 1-epimerase VARPA_RS05530 PF08450 SMP-30/Gluconolactonase/LRE-like region VARPA_RS05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS05540 PF03466 LysR substrate binding domain VARPA_RS05545 PF00171 Aldehyde dehydrogenase family VARPA_RS05550 PF13407 Periplasmic binding protein domain VARPA_RS05555 PF13407 Periplasmic binding protein domain VARPA_RS05560 PF00005 ABC transporter VARPA_RS05565 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS05570 PF00005 ABC transporter VARPA_RS05575 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS05580 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS05585 PF00920 Dehydratase family VARPA_RS05590 PF00701 Dihydrodipicolinate synthetase family VARPA_RS05595 PF03466 LysR substrate binding domain VARPA_RS05595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS05620 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS05620 PF08245 Mur ligase middle domain VARPA_RS05620 PF08443 RimK-like ATP-grasp domain VARPA_RS05625 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS05625 PF08245 Mur ligase middle domain VARPA_RS05625 PF08443 RimK-like ATP-grasp domain VARPA_RS05630 PF00005 ABC transporter VARPA_RS05630 PF00664 ABC transporter transmembrane region VARPA_RS05640 PF01757 Acyltransferase family VARPA_RS05650 PF06508 Queuosine biosynthesis protein QueC VARPA_RS05655 PF06472 ABC transporter transmembrane region 2 VARPA_RS05655 PF00005 ABC transporter VARPA_RS05675 PF00005 ABC transporter VARPA_RS05675 PF08402 TOBE domain VARPA_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05685 PF07690 Major Facilitator Superfamily VARPA_RS05690 PF00155 Aminotransferase class I and II VARPA_RS05690 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS05700 PF00034 Cytochrome c VARPA_RS05705 PF00034 Cytochrome c VARPA_RS05705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VARPA_RS05710 PF01979 Amidohydrolase family VARPA_RS05715 PF05506 Domain of unknown function (DUF756) VARPA_RS05715 PF04185 Phosphoesterase family VARPA_RS05725 PF05506 Domain of unknown function (DUF756) VARPA_RS05725 PF04185 Phosphoesterase family VARPA_RS05730 PF05506 Domain of unknown function (DUF756) VARPA_RS05730 PF04185 Phosphoesterase family VARPA_RS05750 PF00482 Type II secretion system (T2SS), protein F VARPA_RS05755 PF00437 Type II/IV secretion system protein VARPA_RS05760 PF03958 Bacterial type II/III secretion system short domain VARPA_RS05760 PF00263 Bacterial type II and III secretion system protein VARPA_RS05785 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS05785 PF11612 Type II secretion system (T2SS), protein J VARPA_RS05790 PF02501 Type II secretion system (T2SS), protein I VARPA_RS05790 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS05800 PF08334 Type II secretion system (T2SS), protein G VARPA_RS05800 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS05810 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS05810 PF00585 C-terminal regulatory domain of Threonine dehydratase VARPA_RS05820 PF13609 Gram-negative porin VARPA_RS05825 PF02566 OsmC-like protein VARPA_RS05830 PF03232 Ubiquinone biosynthesis protein COQ7 VARPA_RS05835 PF13609 Gram-negative porin VARPA_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05845 PF07687 Peptidase dimerisation domain VARPA_RS05845 PF01546 Peptidase family M20/M25/M40 VARPA_RS05855 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05855 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS05860 PF00005 ABC transporter VARPA_RS05860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS05865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS05865 PF00005 ABC transporter VARPA_RS05875 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VARPA_RS05880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VARPA_RS05880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VARPA_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05895 PF00005 ABC transporter VARPA_RS05895 PF08402 TOBE domain VARPA_RS05910 PF00923 Transaldolase/Fructose-6-phosphate aldolase VARPA_RS05915 PF00342 Phosphoglucose isomerase VARPA_RS05920 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VARPA_RS05925 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS05930 PF03466 LysR substrate binding domain VARPA_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS05940 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS05950 PF00005 ABC transporter VARPA_RS05950 PF03459 TOBE domain VARPA_RS05950 PF17912 MalK OB fold domain VARPA_RS05955 PF01232 Mannitol dehydrogenase Rossmann domain VARPA_RS05955 PF08125 Mannitol dehydrogenase C-terminal domain VARPA_RS05965 PF00923 Transaldolase/Fructose-6-phosphate aldolase VARPA_RS05970 PF00294 pfkB family carbohydrate kinase VARPA_RS05975 PF12833 Helix-turn-helix domain VARPA_RS05975 PF00072 Response regulator receiver domain VARPA_RS05980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VARPA_RS05980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS05985 PF00118 TCP-1/cpn60 chaperonin family VARPA_RS05990 PF00166 Chaperonin 10 Kd subunit VARPA_RS05995 PF07687 Peptidase dimerisation domain VARPA_RS05995 PF01546 Peptidase family M20/M25/M40 VARPA_RS06000 PF03466 LysR substrate binding domain VARPA_RS06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS06020 PF13091 PLD-like domain VARPA_RS06025 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS06025 PF00593 TonB dependent receptor VARPA_RS06040 PF00593 TonB dependent receptor VARPA_RS06040 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS06045 PF02773 S-adenosylmethionine synthetase, C-terminal domain VARPA_RS06045 PF00438 S-adenosylmethionine synthetase, N-terminal domain VARPA_RS06045 PF02772 S-adenosylmethionine synthetase, central domain VARPA_RS06055 PF03279 Bacterial lipid A biosynthesis acyltransferase VARPA_RS06065 PF01926 50S ribosome-binding GTPase VARPA_RS06070 PF00034 Cytochrome c VARPA_RS06075 PF05140 ResB-like family VARPA_RS06080 PF01578 Cytochrome C assembly protein VARPA_RS06085 PF00174 Oxidoreductase molybdopterin binding domain VARPA_RS06090 PF01794 Ferric reductase like transmembrane component VARPA_RS06095 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VARPA_RS06095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VARPA_RS06105 PF01491 Frataxin-like domain VARPA_RS06110 PF17092 Penicillin-binding protein OB-like domain VARPA_RS06110 PF00912 Transglycosylase VARPA_RS06110 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS06115 PF11104 Type IV pilus assembly protein PilM; VARPA_RS06120 PF05137 Fimbrial assembly protein (PilN) VARPA_RS06130 PF04351 Pilus assembly protein, PilP VARPA_RS06135 PF11741 AMIN domain VARPA_RS06135 PF00263 Bacterial type II and III secretion system protein VARPA_RS06135 PF03958 Bacterial type II/III secretion system short domain VARPA_RS06135 PF07660 Secretin and TonB N terminus short domain VARPA_RS06140 PF01202 Shikimate kinase VARPA_RS06145 PF01761 3-dehydroquinate synthase VARPA_RS06150 PF01966 HD domain VARPA_RS06150 PF13286 Phosphohydrolase-associated domain VARPA_RS06175 PF04898 Glutamate synthase central domain VARPA_RS06175 PF01645 Conserved region in glutamate synthase VARPA_RS06175 PF01493 GXGXG motif VARPA_RS06175 PF00310 Glutamine amidotransferases class-II VARPA_RS06180 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS06180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VARPA_RS06185 PF00005 ABC transporter VARPA_RS06190 PF02405 Permease MlaE VARPA_RS06195 PF02470 MlaD protein VARPA_RS06200 PF04333 MlaA lipoprotein VARPA_RS06215 PF00005 ABC transporter VARPA_RS06220 PF01061 ABC-2 type transporter VARPA_RS06225 PF01722 BolA-like protein VARPA_RS06230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VARPA_RS06235 PF01634 ATP phosphoribosyltransferase VARPA_RS06240 PF00815 Histidinol dehydrogenase VARPA_RS06260 PF00155 Aminotransferase class I and II VARPA_RS06265 PF00475 Imidazoleglycerol-phosphate dehydratase VARPA_RS06270 PF00117 Glutamine amidotransferase class-I VARPA_RS06275 PF00977 Histidine biosynthesis protein VARPA_RS06280 PF02463 RecF/RecN/SMC N terminal domain VARPA_RS06285 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS06290 PF00375 Sodium:dicarboxylate symporter family VARPA_RS06300 PF00977 Histidine biosynthesis protein VARPA_RS06305 PF01502 Phosphoribosyl-AMP cyclohydrolase VARPA_RS06310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VARPA_RS06320 PF01230 HIT domain VARPA_RS06325 PF02416 mttA/Hcf106 family VARPA_RS06330 PF02416 mttA/Hcf106 family VARPA_RS06335 PF00902 Sec-independent protein translocase protein (TatC) VARPA_RS06340 PF13180 PDZ domain VARPA_RS06340 PF17820 PDZ domain VARPA_RS06345 PF08946 Osmosensory transporter coiled coil VARPA_RS06345 PF00083 Sugar (and other) transporter VARPA_RS06350 PF01784 NIF3 (NGG1p interacting factor 3) VARPA_RS06355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VARPA_RS06360 PF01741 Large-conductance mechanosensitive channel, MscL VARPA_RS06365 PF18071 HMW1C N-terminal VARPA_RS06365 PF18254 HMW1 domain 2 VARPA_RS06375 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS06375 PF00072 Response regulator receiver domain VARPA_RS06380 PF00355 Rieske [2Fe-2S] domain VARPA_RS06380 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VARPA_RS06385 PF00032 Cytochrome b(C-terminal)/b6/petD VARPA_RS06385 PF00033 Cytochrome b/b6/petB VARPA_RS06390 PF02167 Cytochrome C1 family VARPA_RS06395 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS06395 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS06400 PF04386 Stringent starvation protein B VARPA_RS06410 PF00106 short chain dehydrogenase VARPA_RS06420 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS06420 PF03472 Autoinducer binding domain VARPA_RS06435 PF02272 DHHA1 domain VARPA_RS06435 PF17768 RecJ OB domain VARPA_RS06435 PF01368 DHH family VARPA_RS06445 PF02687 FtsX-like permease family VARPA_RS06445 PF12704 MacB-like periplasmic core domain VARPA_RS06450 PF00005 ABC transporter VARPA_RS06455 PF08281 Sigma-70, region 4 VARPA_RS06455 PF04542 Sigma-70 region 2 VARPA_RS06455 PF12680 SnoaL-like domain VARPA_RS06460 PF00574 Clp protease VARPA_RS06465 PF01042 Endoribonuclease L-PSP VARPA_RS06470 PF12793 Sugar transport-related sRNA regulator N-term VARPA_RS06470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS06475 PF10282 Lactonase, 7-bladed beta-propeller VARPA_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS06485 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS06490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS06490 PF00005 ABC transporter VARPA_RS06495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS06495 PF00005 ABC transporter VARPA_RS06505 PF01418 Helix-turn-helix domain, rpiR family VARPA_RS06505 PF01380 SIS domain VARPA_RS06510 PF07969 Amidohydrolase family VARPA_RS06530 PF01565 FAD binding domain VARPA_RS06530 PF08031 Berberine and berberine like VARPA_RS06535 PF01202 Shikimate kinase VARPA_RS06545 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS06570 PF04072 Leucine carboxyl methyltransferase VARPA_RS06575 PF01613 Flavin reductase like domain VARPA_RS06590 PF00171 Aldehyde dehydrogenase family VARPA_RS06590 PF01575 MaoC like domain VARPA_RS06595 PF00005 ABC transporter VARPA_RS06600 PF00005 ABC transporter VARPA_RS06600 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS06615 PF00175 Oxidoreductase NAD-binding domain VARPA_RS06615 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS06615 PF00970 Oxidoreductase FAD-binding domain VARPA_RS06620 PF01883 Iron-sulfur cluster assembly protein VARPA_RS06625 PF05138 Phenylacetic acid catabolic protein VARPA_RS06630 PF06243 Phenylacetic acid degradation B VARPA_RS06635 PF05138 Phenylacetic acid catabolic protein VARPA_RS06640 PF14535 AMP-binding enzyme C-terminal domain VARPA_RS06640 PF00501 AMP-binding enzyme VARPA_RS06645 PF03061 Thioesterase superfamily VARPA_RS06650 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS06655 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS06660 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS06665 PF00106 short chain dehydrogenase VARPA_RS06675 PF07584 Aerotolerance regulator N-terminal VARPA_RS06675 PF13519 von Willebrand factor type A domain VARPA_RS06680 PF01882 Protein of unknown function DUF58 VARPA_RS06685 PF17863 AAA lid domain VARPA_RS06685 PF07726 ATPase family associated with various cellular activities (AAA) VARPA_RS06690 PF00595 PDZ domain VARPA_RS06695 PF01026 TatD related DNase VARPA_RS06715 PF00437 Type II/IV secretion system protein VARPA_RS06715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VARPA_RS06725 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS06730 PF03466 LysR substrate binding domain VARPA_RS06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS06735 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS06750 PF00106 short chain dehydrogenase VARPA_RS06765 PF08421 Putative zinc binding domain VARPA_RS06765 PF08484 C-methyltransferase C-terminal domain VARPA_RS06770 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS06785 PF00107 Zinc-binding dehydrogenase VARPA_RS06785 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS06795 PF13593 SBF-like CPA transporter family (DUF4137) VARPA_RS06800 PF02690 Na+/Pi-cotransporter VARPA_RS06805 PF00149 Calcineurin-like phosphoesterase VARPA_RS06810 PF00005 ABC transporter VARPA_RS06810 PF12857 TOBE-like domain VARPA_RS06810 PF17850 CysA C-terminal regulatory domain VARPA_RS06815 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS06830 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS06835 PF01252 Signal peptidase (SPase) II VARPA_RS06840 PF00133 tRNA synthetases class I (I, L, M and V) VARPA_RS06840 PF06827 Zinc finger found in FPG and IleRS VARPA_RS06840 PF08264 Anticodon-binding domain of tRNA VARPA_RS06845 PF01687 Riboflavin kinase VARPA_RS06845 PF06574 FAD synthetase VARPA_RS06855 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS06860 PF01674 Lipase (class 2) VARPA_RS06865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS06865 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS06865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS06870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS06870 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS06870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS06875 PF00551 Formyl transferase VARPA_RS06895 PF01189 16S rRNA methyltransferase RsmB/F VARPA_RS06895 PF01029 NusB family VARPA_RS06905 PF00471 Ribosomal protein L33 VARPA_RS06910 PF00830 Ribosomal L28 family VARPA_RS06915 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS06920 PF00027 Cyclic nucleotide-binding domain VARPA_RS06920 PF13545 Crp-like helix-turn-helix domain VARPA_RS06925 PF01580 FtsK/SpoIIIE family VARPA_RS06925 PF09397 Ftsk gamma domain VARPA_RS06925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VARPA_RS06925 PF17854 FtsK alpha domain VARPA_RS06930 PF03548 Outer membrane lipoprotein carrier protein LolA VARPA_RS06935 PF16193 AAA C-terminal domain VARPA_RS06935 PF12002 MgsA AAA+ ATPase C terminal VARPA_RS06935 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS06940 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS06945 PF11862 Domain of unknown function (DUF3382) VARPA_RS06945 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS06950 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS06950 PF00005 ABC transporter VARPA_RS06955 PF00005 ABC transporter VARPA_RS06960 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS06965 PF00175 Oxidoreductase NAD-binding domain VARPA_RS06965 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS06965 PF00970 Oxidoreductase FAD-binding domain VARPA_RS06985 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS06990 PF00293 NUDIX domain VARPA_RS06990 PF09297 NADH pyrophosphatase zinc ribbon domain VARPA_RS06990 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain VARPA_RS06995 PF01206 Sulfurtransferase TusA VARPA_RS07000 PF00483 Nucleotidyl transferase VARPA_RS07005 PF08264 Anticodon-binding domain of tRNA VARPA_RS07005 PF10458 Valyl tRNA synthetase tRNA binding arm VARPA_RS07005 PF00133 tRNA synthetases class I (I, L, M and V) VARPA_RS07010 PF03883 Peroxide stress protein YaaA VARPA_RS07020 PF00561 alpha/beta hydrolase fold VARPA_RS07025 PF14489 QueF-like protein VARPA_RS07025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VARPA_RS07030 PF00106 short chain dehydrogenase VARPA_RS07045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS07045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS07045 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS07055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS07055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS07055 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS07060 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS07065 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS07065 PF00501 AMP-binding enzyme VARPA_RS07090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VARPA_RS07090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VARPA_RS07100 PF11798 IMS family HHH motif VARPA_RS07100 PF11799 impB/mucB/samB family C-terminal domain VARPA_RS07100 PF00817 impB/mucB/samB family VARPA_RS07105 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family VARPA_RS07115 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS07120 PF03466 LysR substrate binding domain VARPA_RS07120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07135 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS07140 PF02371 Transposase IS116/IS110/IS902 family VARPA_RS07140 PF01548 Transposase VARPA_RS07145 PF07729 FCD domain VARPA_RS07145 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS07150 PF13609 Gram-negative porin VARPA_RS07170 PF00005 ABC transporter VARPA_RS07175 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS07185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VARPA_RS07185 PF13378 Enolase C-terminal domain-like VARPA_RS07205 PF00083 Sugar (and other) transporter VARPA_RS07210 PF01070 FMN-dependent dehydrogenase VARPA_RS07215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07215 PF03466 LysR substrate binding domain VARPA_RS07220 PF02652 L-lactate permease VARPA_RS07235 PF02560 Cyanate lyase C-terminal domain VARPA_RS07240 PF00106 short chain dehydrogenase VARPA_RS07265 PF04304 Protein of unknown function (DUF454) VARPA_RS07285 PF03971 Monomeric isocitrate dehydrogenase VARPA_RS07290 PF00005 ABC transporter VARPA_RS07295 PF07690 Major Facilitator Superfamily VARPA_RS07300 PF07729 FCD domain VARPA_RS07300 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS07310 PF04536 TPM domain VARPA_RS07315 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS07315 PF00912 Transglycosylase VARPA_RS07325 PF01810 LysE type translocator VARPA_RS07345 PF01425 Amidase VARPA_RS07355 PF00083 Sugar (and other) transporter VARPA_RS07370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07380 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS07390 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS07405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS07435 PF04545 Sigma-70, region 4 VARPA_RS07435 PF04542 Sigma-70 region 2 VARPA_RS07450 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS07450 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS07455 PF01527 Transposase VARPA_RS07455 PF00665 Integrase core domain VARPA_RS07455 PF13276 HTH-like domain VARPA_RS07460 PF01527 Transposase VARPA_RS07465 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS07490 PF02321 Outer membrane efflux protein VARPA_RS07495 PF00873 AcrB/AcrD/AcrF family VARPA_RS07500 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS07500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS07510 PF00206 Lyase VARPA_RS07510 PF14698 Argininosuccinate lyase C-terminal VARPA_RS07515 PF06580 Histidine kinase VARPA_RS07515 PF07694 5TMR of 5TMR-LYT VARPA_RS07520 PF00072 Response regulator receiver domain VARPA_RS07520 PF04397 LytTr DNA-binding domain VARPA_RS07525 PF01594 AI-2E family transporter VARPA_RS07530 PF01638 HxlR-like helix-turn-helix VARPA_RS07550 PF03466 LysR substrate binding domain VARPA_RS07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07555 PF07690 Major Facilitator Superfamily VARPA_RS07565 PF00311 Phosphoenolpyruvate carboxylase VARPA_RS07570 PF03900 Porphobilinogen deaminase, C-terminal domain VARPA_RS07570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VARPA_RS07590 PF07690 Major Facilitator Superfamily VARPA_RS07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07595 PF03466 LysR substrate binding domain VARPA_RS07600 PF12111 Polyribonucleotide phosphorylase C terminal VARPA_RS07600 PF10150 Ribonuclease E/G family VARPA_RS07600 PF00575 S1 RNA binding domain VARPA_RS07605 PF00849 RNA pseudouridylate synthase VARPA_RS07605 PF01479 S4 domain VARPA_RS07620 PF06965 Na+/H+ antiporter 1 VARPA_RS07620 PF01343 Peptidase family S49 VARPA_RS07625 PF07690 Major Facilitator Superfamily VARPA_RS07630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VARPA_RS07635 PF02545 Maf-like protein VARPA_RS07640 PF02620 Large ribosomal RNA subunit accumulation protein YceD VARPA_RS07645 PF01783 Ribosomal L32p protein family VARPA_RS07650 PF02504 Fatty acid synthesis protein VARPA_RS07655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VARPA_RS07655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VARPA_RS07660 PF00698 Acyl transferase domain VARPA_RS07670 PF00550 Phosphopantetheine attachment site VARPA_RS07675 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS07675 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS07685 PF08281 Sigma-70, region 4 VARPA_RS07685 PF04542 Sigma-70 region 2 VARPA_RS07700 PF13180 PDZ domain VARPA_RS07705 PF03144 Elongation factor Tu domain 2 VARPA_RS07705 PF00009 Elongation factor Tu GTP binding domain VARPA_RS07705 PF00679 Elongation factor G C-terminus VARPA_RS07705 PF06421 GTP-binding protein LepA C-terminus VARPA_RS07710 PF10502 Signal peptidase, peptidase S26 VARPA_RS07720 PF14622 Ribonuclease-III-like VARPA_RS07720 PF00035 Double-stranded RNA binding motif VARPA_RS07725 PF01926 50S ribosome-binding GTPase VARPA_RS07725 PF07650 KH domain VARPA_RS07730 PF02565 Recombination protein O C terminal VARPA_RS07730 PF11967 Recombination protein O N terminal VARPA_RS07735 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VARPA_RS07740 PF01648 4'-phosphopantetheinyl transferase superfamily VARPA_RS07745 PF00933 Glycosyl hydrolase family 3 N terminal domain VARPA_RS07755 PF01863 Protein of unknown function DUF45 VARPA_RS07760 PF00012 Hsp70 protein VARPA_RS07780 PF01336 OB-fold nucleic acid binding domain VARPA_RS07780 PF00152 tRNA synthetases class II (D, K and N) VARPA_RS07790 PF02325 YGGT family VARPA_RS07795 PF17848 Acetyl-coA carboxylase zinc finger domain VARPA_RS07795 PF01039 Carboxyl transferase domain VARPA_RS07800 PF00290 Tryptophan synthase alpha chain VARPA_RS07805 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS07810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VARPA_RS07815 PF01416 tRNA pseudouridine synthase VARPA_RS07825 PF01118 Semialdehyde dehydrogenase, NAD binding domain VARPA_RS07825 PF02774 Semialdehyde dehydrogenase, dimerisation domain VARPA_RS07830 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS07835 PF00694 Aconitase C-terminal domain VARPA_RS07840 PF00330 Aconitase family (aconitate hydratase) VARPA_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS07845 PF03466 LysR substrate binding domain VARPA_RS07850 PF00285 Citrate synthase, C-terminal domain VARPA_RS07855 PF03937 Flavinator of succinate dehydrogenase VARPA_RS07860 PF13085 2Fe-2S iron-sulfur cluster binding domain VARPA_RS07865 PF02910 Fumarate reductase flavoprotein C-term VARPA_RS07865 PF00890 FAD binding domain VARPA_RS07880 PF07702 UTRA domain VARPA_RS07880 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS07885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VARPA_RS07885 PF00056 lactate/malate dehydrogenase, NAD binding domain VARPA_RS07905 PF11791 Aconitate B N-terminal domain VARPA_RS07905 PF06434 Aconitate hydratase 2 N-terminus VARPA_RS07905 PF00330 Aconitase family (aconitate hydratase) VARPA_RS07945 PF05658 Head domain of trimeric autotransporter adhesin VARPA_RS07945 PF03895 YadA-like membrane anchor domain VARPA_RS07945 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS07945 PF05662 Coiled stalk of trimeric autotransporter adhesin VARPA_RS07965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS07965 PF09317 Domain of unknown function (DUF1974) VARPA_RS07965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS07980 PF00330 Aconitase family (aconitate hydratase) VARPA_RS07980 PF00694 Aconitase C-terminal domain VARPA_RS07995 PF07664 Ferrous iron transport protein B C terminus VARPA_RS07995 PF02421 Ferrous iron transport protein B VARPA_RS07995 PF07670 Nucleoside recognition VARPA_RS08005 PF01494 FAD binding domain VARPA_RS08015 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VARPA_RS08020 PF03301 Tryptophan 2,3-dioxygenase VARPA_RS08030 PF00266 Aminotransferase class-V VARPA_RS08035 PF04199 Putative cyclase VARPA_RS08045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VARPA_RS08045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VARPA_RS08050 PF00202 Aminotransferase class-III VARPA_RS08060 PF01649 Ribosomal protein S20 VARPA_RS08065 PF03023 Lipid II flippase MurJ VARPA_RS08070 PF13369 Transglutaminase-like superfamily VARPA_RS08080 PF03795 YCII-related domain VARPA_RS08085 PF03795 YCII-related domain VARPA_RS08095 PF04542 Sigma-70 region 2 VARPA_RS08095 PF08281 Sigma-70, region 4 VARPA_RS08100 PF02311 AraC-like ligand binding domain VARPA_RS08100 PF12833 Helix-turn-helix domain VARPA_RS08120 PF02769 AIR synthase related protein, C-terminal domain VARPA_RS08120 PF00586 AIR synthase related protein, N-terminal domain VARPA_RS08125 PF00308 Bacterial dnaA protein VARPA_RS08130 PF12626 Polymerase A arginine-rich C-terminus VARPA_RS08130 PF01743 Poly A polymerase head domain VARPA_RS08130 PF12627 Probable RNA and SrmB- binding site of polymerase A VARPA_RS08135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VARPA_RS08140 PF01865 Protein of unknown function DUF47 VARPA_RS08145 PF01384 Phosphate transporter family VARPA_RS08160 PF00886 Ribosomal protein S16 VARPA_RS08165 PF05239 PRC-barrel domain VARPA_RS08165 PF01782 RimM N-terminal domain VARPA_RS08170 PF01746 tRNA (Guanine-1)-methyltransferase VARPA_RS08175 PF01245 Ribosomal protein L19 VARPA_RS08180 PF00293 NUDIX domain VARPA_RS08185 PF17113 Regulatory signalling modulator protein AmpE VARPA_RS08185 PF03186 CobD/Cbib protein VARPA_RS08190 PF00155 Aminotransferase class I and II VARPA_RS08195 PF03193 RsgA GTPase VARPA_RS08200 PF01329 Pterin 4 alpha carbinolamine dehydratase VARPA_RS08205 PF01435 Peptidase family M48 VARPA_RS08210 PF00929 Exonuclease VARPA_RS08215 PF00270 DEAD/DEAH box helicase VARPA_RS08215 PF00271 Helicase conserved C-terminal domain VARPA_RS08220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VARPA_RS08220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VARPA_RS08225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS08225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS08225 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VARPA_RS08230 PF08386 TAP-like protein VARPA_RS08230 PF00561 alpha/beta hydrolase fold VARPA_RS08235 PF08659 KR domain VARPA_RS08235 PF00107 Zinc-binding dehydrogenase VARPA_RS08235 PF14765 Polyketide synthase dehydratase VARPA_RS08235 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS08235 PF00550 Phosphopantetheine attachment site VARPA_RS08235 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS08235 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS08235 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS08235 PF00698 Acyl transferase domain VARPA_RS08255 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS08255 PF00175 Oxidoreductase NAD-binding domain VARPA_RS08260 PF00355 Rieske [2Fe-2S] domain VARPA_RS08260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VARPA_RS08270 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS08270 PF00501 AMP-binding enzyme VARPA_RS08275 PF02803 Thiolase, C-terminal domain VARPA_RS08275 PF00108 Thiolase, N-terminal domain VARPA_RS08285 PF04199 Putative cyclase VARPA_RS08295 PF13458 Periplasmic binding protein VARPA_RS08300 PF13458 Periplasmic binding protein VARPA_RS08305 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VARPA_RS08305 PF00355 Rieske [2Fe-2S] domain VARPA_RS08310 PF00866 Ring hydroxylating beta subunit VARPA_RS08320 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS08325 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS08325 PF00005 ABC transporter VARPA_RS08330 PF00005 ABC transporter VARPA_RS08335 PF00501 AMP-binding enzyme VARPA_RS08335 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS08340 PF00106 short chain dehydrogenase VARPA_RS08405 PF07859 alpha/beta hydrolase fold VARPA_RS08410 PF00478 IMP dehydrogenase / GMP reductase domain VARPA_RS08415 PF13361 UvrD-like helicase C-terminal domain VARPA_RS08415 PF00580 UvrD/REP helicase N-terminal domain VARPA_RS08435 PF01636 Phosphotransferase enzyme family VARPA_RS08445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VARPA_RS08445 PF00476 DNA polymerase family A VARPA_RS08445 PF01612 3'-5' exonuclease VARPA_RS08445 PF01367 5'-3' exonuclease, C-terminal SAM fold VARPA_RS08450 PF01546 Peptidase family M20/M25/M40 VARPA_RS08450 PF07687 Peptidase dimerisation domain VARPA_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS08455 PF03466 LysR substrate binding domain VARPA_RS08460 PF02525 Flavodoxin-like fold VARPA_RS08465 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS08465 PF00155 Aminotransferase class I and II VARPA_RS08470 PF02627 Carboxymuconolactone decarboxylase family VARPA_RS08475 PF00893 Small Multidrug Resistance protein VARPA_RS08485 PF00593 TonB dependent receptor VARPA_RS08485 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS08495 PF01266 FAD dependent oxidoreductase VARPA_RS08500 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS08510 PF01738 Dienelactone hydrolase family VARPA_RS08525 PF07969 Amidohydrolase family VARPA_RS08530 PF00005 ABC transporter VARPA_RS08530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS08535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS08535 PF00005 ABC transporter VARPA_RS08540 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS08550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS08555 PF07364 Metallopeptidase family M81 VARPA_RS08555 PF07171 MlrC C-terminus VARPA_RS08560 PF01266 FAD dependent oxidoreductase VARPA_RS08580 PF03466 LysR substrate binding domain VARPA_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS08585 PF01118 Semialdehyde dehydrogenase, NAD binding domain VARPA_RS08610 PF07687 Peptidase dimerisation domain VARPA_RS08610 PF01546 Peptidase family M20/M25/M40 VARPA_RS08615 PF11737 Protein of unknown function (DUF3300) VARPA_RS08630 PF00005 ABC transporter VARPA_RS08640 PF00581 Rhodanese-like domain VARPA_RS08655 PF02609 Exonuclease VII small subunit VARPA_RS08660 PF00348 Polyprenyl synthetase VARPA_RS08665 PF02780 Transketolase, C-terminal domain VARPA_RS08665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VARPA_RS08665 PF02779 Transketolase, pyrimidine binding domain VARPA_RS08670 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS08675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS08685 PF12867 DinB superfamily VARPA_RS08685 PF03781 Sulfatase-modifying factor enzyme 1 VARPA_RS08690 PF07690 Major Facilitator Superfamily VARPA_RS08695 PF00266 Aminotransferase class-V VARPA_RS08705 PF00005 ABC transporter VARPA_RS08720 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase VARPA_RS08725 PF00171 Aldehyde dehydrogenase family VARPA_RS08735 PF01266 FAD dependent oxidoreductase VARPA_RS08740 PF00171 Aldehyde dehydrogenase family VARPA_RS08745 PF00202 Aminotransferase class-III VARPA_RS08750 PF03466 LysR substrate binding domain VARPA_RS08750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS08755 PF07702 UTRA domain VARPA_RS08755 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS08765 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS08775 PF00005 ABC transporter VARPA_RS08775 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS08780 PF00005 ABC transporter VARPA_RS08785 PF07687 Peptidase dimerisation domain VARPA_RS08785 PF01546 Peptidase family M20/M25/M40 VARPA_RS08795 PF07171 MlrC C-terminus VARPA_RS08795 PF07364 Metallopeptidase family M81 VARPA_RS08805 PF01590 GAF domain VARPA_RS08805 PF02954 Bacterial regulatory protein, Fis family VARPA_RS08810 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS08810 PF01799 [2Fe-2S] binding domain VARPA_RS08815 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VARPA_RS08815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS08820 PF00941 FAD binding domain in molybdopterin dehydrogenase VARPA_RS08820 PF03450 CO dehydrogenase flavoprotein C-terminal domain VARPA_RS08840 PF13478 XdhC Rossmann domain VARPA_RS08840 PF02625 XdhC and CoxI family VARPA_RS08845 PF03334 Na+/H+ antiporter subunit VARPA_RS08850 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VARPA_RS08860 PF00361 Proton-conducting membrane transporter VARPA_RS08865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VARPA_RS08870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VARPA_RS08870 PF00361 Proton-conducting membrane transporter VARPA_RS08870 PF13244 Domain of unknown function (DUF4040) VARPA_RS08870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VARPA_RS08875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VARPA_RS08880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS08890 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS08900 PF18073 Rubredoxin metal binding domain VARPA_RS08910 PF00216 Bacterial DNA-binding protein VARPA_RS08915 PF00575 S1 RNA binding domain VARPA_RS08920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VARPA_RS08925 PF01842 ACT domain VARPA_RS08925 PF02153 Prephenate dehydrogenase VARPA_RS08930 PF01842 ACT domain VARPA_RS08930 PF00800 Prephenate dehydratase VARPA_RS08930 PF01817 Chorismate mutase type II VARPA_RS08935 PF00266 Aminotransferase class-V VARPA_RS08945 PF03989 DNA gyrase C-terminal domain, beta-propeller VARPA_RS08945 PF00521 DNA gyrase/topoisomerase IV, subunit A VARPA_RS08950 PF00691 OmpA family VARPA_RS08960 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS08975 PF10119 Predicted methyltransferase regulatory domain VARPA_RS08975 PF13847 Methyltransferase domain VARPA_RS08985 PF01479 S4 domain VARPA_RS08985 PF00849 RNA pseudouridylate synthase VARPA_RS09010 PF02464 Competence-damaged protein VARPA_RS09010 PF18146 Damage-inducible protein CinA KH domain VARPA_RS09010 PF00994 Probable molybdopterin binding domain VARPA_RS09015 PF03951 Glutamine synthetase, beta-Grasp domain VARPA_RS09015 PF00120 Glutamine synthetase, catalytic domain VARPA_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS09025 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS09025 PF00989 PAS fold VARPA_RS09030 PF00158 Sigma-54 interaction domain VARPA_RS09030 PF00072 Response regulator receiver domain VARPA_RS09030 PF02954 Bacterial regulatory protein, Fis family VARPA_RS09040 PF03372 Endonuclease/Exonuclease/phosphatase family VARPA_RS09055 PF13378 Enolase C-terminal domain-like VARPA_RS09065 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09070 PF00701 Dihydrodipicolinate synthetase family VARPA_RS09075 PF03466 LysR substrate binding domain VARPA_RS09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS09085 PF03706 Lysylphosphatidylglycerol synthase TM region VARPA_RS09100 PF00186 Dihydrofolate reductase VARPA_RS09105 PF00303 Thymidylate synthase VARPA_RS09110 PF02979 Nitrile hydratase, alpha chain VARPA_RS09125 PF02913 FAD linked oxidases, C-terminal domain VARPA_RS09125 PF01565 FAD binding domain VARPA_RS09135 PF03631 Virulence factor BrkB VARPA_RS09145 PF00085 Thioredoxin VARPA_RS09155 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09160 PF00561 alpha/beta hydrolase fold VARPA_RS09165 PF01053 Cys/Met metabolism PLP-dependent enzyme VARPA_RS09180 PF00962 Adenosine/AMP deaminase VARPA_RS09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS09185 PF03466 LysR substrate binding domain VARPA_RS09240 PF03797 Autotransporter beta-domain VARPA_RS09240 PF02395 Immunoglobulin A1 protease VARPA_RS09240 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS09285 PF04055 Radical SAM superfamily VARPA_RS09290 PF00083 Sugar (and other) transporter VARPA_RS09295 PF00072 Response regulator receiver domain VARPA_RS09295 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS09300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS09300 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS09300 PF00989 PAS fold VARPA_RS09305 PF02321 Outer membrane efflux protein VARPA_RS09310 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS09310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS09315 PF00873 AcrB/AcrD/AcrF family VARPA_RS09320 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS09320 PF08359 YsiA-like protein, C-terminal region VARPA_RS09330 PF13607 Succinyl-CoA ligase like flavodoxin domain VARPA_RS09330 PF00583 Acetyltransferase (GNAT) family VARPA_RS09330 PF13380 CoA binding domain VARPA_RS09335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS09335 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VARPA_RS09340 PF14525 AraC-binding-like domain VARPA_RS09350 PF03358 NADPH-dependent FMN reductase VARPA_RS09355 PF03960 ArsC family VARPA_RS09360 PF02040 Arsenical pump membrane protein VARPA_RS09365 PF01022 Bacterial regulatory protein, arsR family VARPA_RS09380 PF04993 TfoX N-terminal domain VARPA_RS09380 PF04994 TfoX C-terminal domain VARPA_RS09385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS09395 PF00756 Putative esterase VARPA_RS09400 PF00561 alpha/beta hydrolase fold VARPA_RS09405 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS09405 PF00107 Zinc-binding dehydrogenase VARPA_RS09410 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS09420 PF00355 Rieske [2Fe-2S] domain VARPA_RS09420 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS09425 PF01220 Dehydroquinase class II VARPA_RS09430 PF04293 SpoVR like protein VARPA_RS09435 PF04285 Protein of unknown function (DUF444) VARPA_RS09440 PF08298 PrkA AAA domain VARPA_RS09440 PF06798 PrkA serine protein kinase C-terminal domain VARPA_RS09445 PF00226 DnaJ domain VARPA_RS09445 PF01556 DnaJ C terminal domain VARPA_RS09445 PF00684 DnaJ central domain VARPA_RS09450 PF00012 Hsp70 protein VARPA_RS09455 PF01025 GrpE VARPA_RS09460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS09470 PF02666 Phosphatidylserine decarboxylase VARPA_RS09475 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09480 PF10282 Lactonase, 7-bladed beta-propeller VARPA_RS09495 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus VARPA_RS09495 PF08666 SAF domain VARPA_RS09500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS09500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VARPA_RS09510 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS09515 PF08450 SMP-30/Gluconolactonase/LRE-like region VARPA_RS09520 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS09525 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS09525 PF07729 FCD domain VARPA_RS09530 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09535 PF00701 Dihydrodipicolinate synthetase family VARPA_RS09545 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VARPA_RS09550 PF13378 Enolase C-terminal domain-like VARPA_RS09560 PF00171 Aldehyde dehydrogenase family VARPA_RS09565 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS09590 PF00005 ABC transporter VARPA_RS09595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS09605 PF13396 Phospholipase_D-nuclease N-terminal VARPA_RS09605 PF13091 PLD-like domain VARPA_RS09610 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS09615 PF01717 Cobalamin-independent synthase, Catalytic domain VARPA_RS09620 PF00355 Rieske [2Fe-2S] domain VARPA_RS09625 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS09625 PF07729 FCD domain VARPA_RS09630 PF00970 Oxidoreductase FAD-binding domain VARPA_RS09630 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS09635 PF13458 Periplasmic binding protein VARPA_RS09650 PF00005 ABC transporter VARPA_RS09650 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS09655 PF00005 ABC transporter VARPA_RS09660 PF07519 Tannase and feruloyl esterase VARPA_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS09675 PF03466 LysR substrate binding domain VARPA_RS09680 PF00682 HMGL-like VARPA_RS09685 PF02515 CoA-transferase family III VARPA_RS09690 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS09695 PF00893 Small Multidrug Resistance protein VARPA_RS09705 PF07690 Major Facilitator Superfamily VARPA_RS09715 PF04546 Sigma-70, non-essential region VARPA_RS09715 PF00140 Sigma-70 factor, region 1.2 VARPA_RS09715 PF04542 Sigma-70 region 2 VARPA_RS09715 PF04539 Sigma-70 region 3 VARPA_RS09715 PF04545 Sigma-70, region 4 VARPA_RS09715 PF03979 Sigma-70 factor, region 1.1 VARPA_RS09720 PF08278 DNA primase DnaG DnaB-binding VARPA_RS09720 PF08275 DNA primase catalytic core, N-terminal domain VARPA_RS09720 PF10410 DnaB-helicase binding domain of primase VARPA_RS09720 PF01807 CHC2 zinc finger VARPA_RS09725 PF03631 Virulence factor BrkB VARPA_RS09730 PF00106 short chain dehydrogenase VARPA_RS09735 PF09361 Phasin protein VARPA_RS09740 PF00850 Histone deacetylase domain VARPA_RS09745 PF03061 Thioesterase superfamily VARPA_RS09755 PF05532 CsbD-like VARPA_RS09760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VARPA_RS09760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VARPA_RS09770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS09770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS09775 PF02646 RmuC family VARPA_RS09795 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS09800 PF03641 Possible lysine decarboxylase VARPA_RS09805 PF09285 Elongation factor P, C-terminal VARPA_RS09805 PF01132 Elongation factor P (EF-P) OB domain VARPA_RS09805 PF08207 Elongation factor P (EF-P) KOW-like domain VARPA_RS09825 PF02151 UvrB/uvrC motif VARPA_RS09825 PF01541 GIY-YIG catalytic domain VARPA_RS09825 PF08459 UvrC Helix-hairpin-helix N-terminal VARPA_RS09830 PF01066 CDP-alcohol phosphatidyltransferase VARPA_RS09840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS09840 PF03466 LysR substrate binding domain VARPA_RS09845 PF00561 alpha/beta hydrolase fold VARPA_RS09850 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS09855 PF00216 Bacterial DNA-binding protein VARPA_RS10065 PF00072 Response regulator receiver domain VARPA_RS10065 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS10070 PF12697 Alpha/beta hydrolase family VARPA_RS10075 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS10075 PF07689 KaiB domain VARPA_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS10275 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS10275 PF00107 Zinc-binding dehydrogenase VARPA_RS10275 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS10275 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS10275 PF08659 KR domain VARPA_RS10275 PF00550 Phosphopantetheine attachment site VARPA_RS10275 PF14765 Polyketide synthase dehydratase VARPA_RS10275 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS10275 PF00698 Acyl transferase domain VARPA_RS10280 PF01975 Survival protein SurE VARPA_RS10290 PF01476 LysM domain VARPA_RS10290 PF01551 Peptidase family M23 VARPA_RS10295 PF00140 Sigma-70 factor, region 1.2 VARPA_RS10295 PF04545 Sigma-70, region 4 VARPA_RS10295 PF04542 Sigma-70 region 2 VARPA_RS10295 PF04539 Sigma-70 region 3 VARPA_RS10300 PF05958 tRNA (Uracil-5-)-methyltransferase VARPA_RS10305 PF01027 Inhibitor of apoptosis-promoting Bax1 VARPA_RS10310 PF03928 Haem-degrading VARPA_RS10320 PF02472 Biopolymer transport protein ExbD/TolR VARPA_RS10325 PF01618 MotA/TolQ/ExbB proton channel family VARPA_RS10335 PF18331 PKHD-type hydroxylase C-terminal domain VARPA_RS10335 PF13640 2OG-Fe(II) oxygenase superfamily VARPA_RS10340 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS10340 PF00593 TonB dependent receptor VARPA_RS10345 PF00667 FAD binding domain VARPA_RS10345 PF00258 Flavodoxin VARPA_RS10345 PF00175 Oxidoreductase NAD-binding domain VARPA_RS10350 PF02424 ApbE family VARPA_RS10370 PF00210 Ferritin-like domain VARPA_RS10375 PF00578 AhpC/TSA family VARPA_RS10375 PF10417 C-terminal domain of 1-Cys peroxiredoxin VARPA_RS10380 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS10380 PF13192 Thioredoxin domain VARPA_RS10385 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS10385 PF00593 TonB dependent receptor VARPA_RS10390 PF05171 Haemin-degrading HemS.ChuX domain VARPA_RS10405 PF01032 FecCD transport family VARPA_RS10410 PF00005 ABC transporter VARPA_RS10415 PF03618 Kinase/pyrophosphorylase VARPA_RS10420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VARPA_RS10420 PF02896 PEP-utilising enzyme, TIM barrel domain VARPA_RS10420 PF00391 PEP-utilising enzyme, mobile domain VARPA_RS10430 PF01250 Ribosomal protein S6 VARPA_RS10440 PF01084 Ribosomal protein S18 VARPA_RS10445 PF01281 Ribosomal protein L9, N-terminal domain VARPA_RS10445 PF03948 Ribosomal protein L9, C-terminal domain VARPA_RS10450 PF03796 DnaB-like helicase C terminal domain VARPA_RS10450 PF00772 DnaB-like helicase N terminal domain VARPA_RS10470 PF01878 EVE domain VARPA_RS10480 PF13638 PIN domain VARPA_RS10480 PF02562 PhoH-like protein VARPA_RS10485 PF00578 AhpC/TSA family VARPA_RS10495 PF00155 Aminotransferase class I and II VARPA_RS10500 PF03447 Homoserine dehydrogenase, NAD binding domain VARPA_RS10500 PF00742 Homoserine dehydrogenase VARPA_RS10500 PF01842 ACT domain VARPA_RS10505 PF14821 Threonine synthase N terminus VARPA_RS10505 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS10510 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VARPA_RS10515 PF00994 Probable molybdopterin binding domain VARPA_RS10515 PF03453 MoeA N-terminal region (domain I and II) VARPA_RS10515 PF03454 MoeA C-terminal region (domain IV) VARPA_RS10525 PF00701 Dihydrodipicolinate synthetase family VARPA_RS10530 PF02391 MoaE protein VARPA_RS10535 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS10540 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS10540 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS10540 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS10540 PF17871 AAA lid domain VARPA_RS10540 PF02861 Clp amino terminal domain, pathogenicity island component VARPA_RS10550 PF00501 AMP-binding enzyme VARPA_RS10555 PF00005 ABC transporter VARPA_RS10575 PF00005 ABC transporter VARPA_RS10575 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS10580 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS10580 PF17754 MftR C-terminal domain VARPA_RS10585 PF00108 Thiolase, N-terminal domain VARPA_RS10585 PF02803 Thiolase, C-terminal domain VARPA_RS10590 PF00472 RF-1 domain VARPA_RS10595 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS10600 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS10600 PF00107 Zinc-binding dehydrogenase VARPA_RS10615 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS10620 PF08402 TOBE domain VARPA_RS10620 PF00005 ABC transporter VARPA_RS10625 PF00135 Carboxylesterase family VARPA_RS10630 PF02515 CoA-transferase family III VARPA_RS10635 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS10655 PF03466 LysR substrate binding domain VARPA_RS10660 PF00916 Sulfate permease family VARPA_RS10660 PF01740 STAS domain VARPA_RS10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS10675 PF03466 LysR substrate binding domain VARPA_RS10680 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS10680 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS10685 PF00550 Phosphopantetheine attachment site VARPA_RS10715 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS10720 PF00589 Phage integrase family VARPA_RS10720 PF02899 Phage integrase, N-terminal SAM-like domain VARPA_RS10725 PF03466 LysR substrate binding domain VARPA_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS10735 PF00005 ABC transporter VARPA_RS10740 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS10745 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase VARPA_RS10750 PF00465 Iron-containing alcohol dehydrogenase VARPA_RS10755 PF00171 Aldehyde dehydrogenase family VARPA_RS10765 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS10770 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS10780 PF02803 Thiolase, C-terminal domain VARPA_RS10780 PF00108 Thiolase, N-terminal domain VARPA_RS10795 PF04305 Protein of unknown function (DUF455) VARPA_RS10800 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS10805 PF01430 Hsp33 protein VARPA_RS10835 PF08479 POTRA domain, ShlB-type VARPA_RS10835 PF17287 POTRA domain VARPA_RS10835 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VARPA_RS10870 PF04973 Nicotinamide mononucleotide transporter VARPA_RS10875 PF04977 Septum formation initiator VARPA_RS10880 PF03952 Enolase, N-terminal domain VARPA_RS10880 PF00113 Enolase, C-terminal TIM barrel domain VARPA_RS10890 PF00793 DAHP synthetase I family VARPA_RS10890 PF00793 DAHP synthetase I family VARPA_RS10895 PF00117 Glutamine amidotransferase class-I VARPA_RS10895 PF06418 CTP synthase N-terminus VARPA_RS10900 PF02441 Flavoprotein VARPA_RS10900 PF04127 DNA / pantothenate metabolism flavoprotein VARPA_RS10910 PF00692 dUTPase VARPA_RS10920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS10925 PF08007 Cupin superfamily protein VARPA_RS10940 PF00753 Metallo-beta-lactamase superfamily VARPA_RS10945 PF06804 NlpB/DapX lipoprotein VARPA_RS10950 PF00701 Dihydrodipicolinate synthetase family VARPA_RS10965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS10965 PF01751 Toprim domain VARPA_RS10965 PF00986 DNA gyrase B subunit, carboxyl terminus VARPA_RS10965 PF00204 DNA gyrase B VARPA_RS10970 PF01551 Peptidase family M23 VARPA_RS10970 PF10145 Phage-related minor tail protein VARPA_RS10970 PF01464 Transglycosylase SLT domain VARPA_RS10975 PF00521 DNA gyrase/topoisomerase IV, subunit A VARPA_RS10985 PF12706 Beta-lactamase superfamily domain VARPA_RS11000 PF00857 Isochorismatase family VARPA_RS11015 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS11025 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS11030 PF00005 ABC transporter VARPA_RS11040 PF00294 pfkB family carbohydrate kinase VARPA_RS11045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS11045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS11050 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS11055 PF05199 GMC oxidoreductase VARPA_RS11055 PF00732 GMC oxidoreductase VARPA_RS11060 PF14031 Putative serine dehydratase domain VARPA_RS11060 PF01168 Alanine racemase, N-terminal domain VARPA_RS11065 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS11070 PF03466 LysR substrate binding domain VARPA_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS11085 PF01841 Transglutaminase-like superfamily VARPA_RS11085 PF08379 Bacterial transglutaminase-like N-terminal region VARPA_RS11090 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS11095 PF04168 A predicted alpha-helical domain with a conserved ER motif. VARPA_RS11095 PF14403 Circularly permuted ATP-grasp type 2 VARPA_RS11105 PF00753 Metallo-beta-lactamase superfamily VARPA_RS11105 PF03772 Competence protein VARPA_RS11110 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS11115 PF14403 Circularly permuted ATP-grasp type 2 VARPA_RS11135 PF08019 Phosphoethanolamine transferase EptA/EptB VARPA_RS11135 PF00884 Sulfatase VARPA_RS11145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS11145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VARPA_RS11150 PF08220 DeoR-like helix-turn-helix domain VARPA_RS11150 PF00455 DeoR C terminal sensor domain VARPA_RS11155 PF01266 FAD dependent oxidoreductase VARPA_RS11155 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VARPA_RS11160 PF00005 ABC transporter VARPA_RS11165 PF17912 MalK OB fold domain VARPA_RS11165 PF00005 ABC transporter VARPA_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS11210 PF00005 ABC transporter VARPA_RS11225 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS11225 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS11240 PF13406 Transglycosylase SLT domain VARPA_RS11245 PF13559 Domain of unknown function (DUF4129) VARPA_RS11245 PF11992 Domain of unknown function (DUF3488) VARPA_RS11245 PF01841 Transglutaminase-like superfamily VARPA_RS11255 PF17863 AAA lid domain VARPA_RS11255 PF07726 ATPase family associated with various cellular activities (AAA) VARPA_RS11260 PF00850 Histone deacetylase domain VARPA_RS11265 PF12794 Mechanosensitive ion channel inner membrane domain 1 VARPA_RS11265 PF12795 Mechanosensitive ion channel porin domain VARPA_RS11265 PF00924 Mechanosensitive ion channel VARPA_RS11270 PF01012 Electron transfer flavoprotein domain VARPA_RS11275 PF01012 Electron transfer flavoprotein domain VARPA_RS11275 PF00766 Electron transfer flavoprotein FAD-binding domain VARPA_RS11280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS11280 PF12806 Acetyl-CoA dehydrogenase C-terminal like VARPA_RS11280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS11280 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS11300 PF00501 AMP-binding enzyme VARPA_RS11300 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS11310 PF13452 N-terminal half of MaoC dehydratase VARPA_RS11325 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS11335 PF01022 Bacterial regulatory protein, arsR family VARPA_RS11350 PF03795 YCII-related domain VARPA_RS11360 PF07690 Major Facilitator Superfamily VARPA_RS11370 PF01264 Chorismate synthase VARPA_RS11380 PF13407 Periplasmic binding protein domain VARPA_RS11385 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS11390 PF00005 ABC transporter VARPA_RS11405 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS11410 PF00005 ABC transporter VARPA_RS11415 PF08450 SMP-30/Gluconolactonase/LRE-like region VARPA_RS11420 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS11420 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VARPA_RS11425 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS11425 PF00107 Zinc-binding dehydrogenase VARPA_RS11430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS11430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS11440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS11440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS11450 PF11008 Protein of unknown function (DUF2846) VARPA_RS11470 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS11470 PF08521 Two-component sensor kinase N-terminal VARPA_RS11470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS11475 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS11475 PF00072 Response regulator receiver domain VARPA_RS11480 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS11485 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS11485 PF00672 HAMP domain VARPA_RS11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS11490 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS11490 PF00072 Response regulator receiver domain VARPA_RS11495 PF12951 Passenger-associated-transport-repeat VARPA_RS11500 PF01614 Bacterial transcriptional regulator VARPA_RS11500 PF09339 IclR helix-turn-helix domain VARPA_RS11505 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VARPA_RS11505 PF08501 Shikimate dehydrogenase substrate binding domain VARPA_RS11505 PF01488 Shikimate / quinate 5-dehydrogenase VARPA_RS11510 PF08501 Shikimate dehydrogenase substrate binding domain VARPA_RS11510 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VARPA_RS11510 PF01488 Shikimate / quinate 5-dehydrogenase VARPA_RS11515 PF10397 Adenylosuccinate lyase C-terminus VARPA_RS11515 PF00206 Lyase VARPA_RS11525 PF07690 Major Facilitator Superfamily VARPA_RS11530 PF00561 alpha/beta hydrolase fold VARPA_RS11535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS11535 PF01261 Xylose isomerase-like TIM barrel VARPA_RS11540 PF00083 Sugar (and other) transporter VARPA_RS11540 PF07690 Major Facilitator Superfamily VARPA_RS11560 PF00561 alpha/beta hydrolase fold VARPA_RS11585 PF03942 DTW domain VARPA_RS11620 PF01527 Transposase VARPA_RS11630 PF01527 Transposase VARPA_RS11635 PF13276 HTH-like domain VARPA_RS11635 PF00665 Integrase core domain VARPA_RS11635 PF13333 Integrase core domain VARPA_RS11640 PF13302 Acetyltransferase (GNAT) domain VARPA_RS11645 PF03466 LysR substrate binding domain VARPA_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS11655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VARPA_RS11665 PF03060 Nitronate monooxygenase VARPA_RS11685 PF02347 Glycine cleavage system P-protein VARPA_RS11690 PF01597 Glycine cleavage H-protein VARPA_RS11695 PF08669 Glycine cleavage T-protein C-terminal barrel domain VARPA_RS11695 PF01571 Aminomethyltransferase folate-binding domain VARPA_RS11715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS11725 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS11745 PF03061 Thioesterase superfamily VARPA_RS11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS11755 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS11755 PF08521 Two-component sensor kinase N-terminal VARPA_RS11760 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS11760 PF00072 Response regulator receiver domain VARPA_RS11770 PF01569 PAP2 superfamily VARPA_RS11775 PF08019 Phosphoethanolamine transferase EptA/EptB VARPA_RS11775 PF00884 Sulfatase VARPA_RS11810 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS11810 PF14497 Glutathione S-transferase, C-terminal domain VARPA_RS11830 PF05985 Ethanolamine ammonia-lyase light chain (EutC) VARPA_RS11835 PF06751 Ethanolamine ammonia lyase large subunit (EutB) VARPA_RS11840 PF13520 Amino acid permease VARPA_RS11845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VARPA_RS11845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS11855 PF04349 Periplasmic glucan biosynthesis protein, MdoG VARPA_RS11865 PF00583 Acetyltransferase (GNAT) family VARPA_RS11915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS11925 PF00072 Response regulator receiver domain VARPA_RS11925 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS11930 PF01144 Coenzyme A transferase VARPA_RS11935 PF01144 Coenzyme A transferase VARPA_RS11945 PF00155 Aminotransferase class I and II VARPA_RS11955 PF03466 LysR substrate binding domain VARPA_RS11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS11960 PF00171 Aldehyde dehydrogenase family VARPA_RS11970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS11970 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS11970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS11975 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS11980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS11980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS11985 PF07690 Major Facilitator Superfamily VARPA_RS11990 PF01425 Amidase VARPA_RS11995 PF03466 LysR substrate binding domain VARPA_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12000 PF03466 LysR substrate binding domain VARPA_RS12005 PF01717 Cobalamin-independent synthase, Catalytic domain VARPA_RS12005 PF08267 Cobalamin-independent synthase, N-terminal domain VARPA_RS12015 PF01381 Helix-turn-helix VARPA_RS12015 PF09856 Predicted transcriptional regulator (DUF2083) VARPA_RS12015 PF06114 IrrE N-terminal-like domain VARPA_RS12030 PF03352 Methyladenine glycosylase VARPA_RS12040 PF07687 Peptidase dimerisation domain VARPA_RS12040 PF01546 Peptidase family M20/M25/M40 VARPA_RS12050 PF01556 DnaJ C terminal domain VARPA_RS12050 PF00226 DnaJ domain VARPA_RS12055 PF00300 Histidine phosphatase superfamily (branch 1) VARPA_RS12055 PF00106 short chain dehydrogenase VARPA_RS12060 PF01804 Penicillin amidase VARPA_RS12065 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS12065 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS12070 PF01066 CDP-alcohol phosphatidyltransferase VARPA_RS12075 PF02540 NAD synthase VARPA_RS12075 PF00958 GMP synthase C terminal domain VARPA_RS12075 PF00117 Glutamine amidotransferase class-I VARPA_RS12090 PF01022 Bacterial regulatory protein, arsR family VARPA_RS12100 PF03006 Haemolysin-III related VARPA_RS12105 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS12105 PF00155 Aminotransferase class I and II VARPA_RS12120 PF01661 Macro domain VARPA_RS12125 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS12135 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS12145 PF10396 GTP-binding protein TrmE N-terminus VARPA_RS12145 PF12631 MnmE helical domain VARPA_RS12145 PF01926 50S ribosome-binding GTPase VARPA_RS12150 PF11067 Protein of unknown function (DUF2868) VARPA_RS12160 PF05947 Type VI secretion system, TssF VARPA_RS12165 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS12165 PF17932 Tetracyclin repressor-like, C-terminal domain VARPA_RS12175 PF00005 ABC transporter VARPA_RS12175 PF00664 ABC transporter transmembrane region VARPA_RS12180 PF03466 LysR substrate binding domain VARPA_RS12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VARPA_RS12195 PF01292 Prokaryotic cytochrome b561 VARPA_RS12225 PF02811 PHP domain VARPA_RS12225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VARPA_RS12225 PF07733 Bacterial DNA polymerase III alpha NTPase domain VARPA_RS12225 PF14579 Helix-hairpin-helix motif VARPA_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12255 PF03466 LysR substrate binding domain VARPA_RS12265 PF03466 LysR substrate binding domain VARPA_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12270 PF02515 CoA-transferase family III VARPA_RS12275 PF00682 HMGL-like VARPA_RS12280 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS12285 PF00135 Carboxylesterase family VARPA_RS12290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VARPA_RS12290 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS12290 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VARPA_RS12295 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VARPA_RS12295 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VARPA_RS12295 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VARPA_RS12305 PF00571 CBS domain VARPA_RS12310 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS12315 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS12315 PF00107 Zinc-binding dehydrogenase VARPA_RS12325 PF00561 alpha/beta hydrolase fold VARPA_RS12340 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS12345 PF13458 Periplasmic binding protein VARPA_RS12350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VARPA_RS12350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VARPA_RS12350 PF04324 BFD-like [2Fe-2S] binding domain VARPA_RS12350 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS12350 PF18267 Rubredoxin NAD+ reductase C-terminal domain VARPA_RS12355 PF13806 Rieske-like [2Fe-2S] domain VARPA_RS12360 PF01226 Formate/nitrite transporter VARPA_RS12365 PF00069 Protein kinase domain VARPA_RS12365 PF03793 PASTA domain VARPA_RS12385 PF00005 ABC transporter VARPA_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS12405 PF02910 Fumarate reductase flavoprotein C-term VARPA_RS12405 PF00890 FAD binding domain VARPA_RS12410 PF07702 UTRA domain VARPA_RS12410 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS12435 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS12435 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS12445 PF13192 Thioredoxin domain VARPA_RS12445 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS12455 PF17941 Polyphosphate kinase C-terminal domain 1 VARPA_RS12455 PF13089 Polyphosphate kinase N-terminal domain VARPA_RS12455 PF13090 Polyphosphate kinase C-terminal domain 2 VARPA_RS12455 PF02503 Polyphosphate kinase middle domain VARPA_RS12465 PF02541 Ppx/GppA phosphatase family VARPA_RS12470 PF12849 PBP superfamily domain VARPA_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS12480 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS12485 PF00005 ABC transporter VARPA_RS12490 PF01895 PhoU domain VARPA_RS12495 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS12495 PF00072 Response regulator receiver domain VARPA_RS12500 PF00989 PAS fold VARPA_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS12500 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS12500 PF11808 Phosphate regulon sensor protein PhoR VARPA_RS12505 PF01554 MatE VARPA_RS12515 PF01197 Ribosomal protein L31 VARPA_RS12520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VARPA_RS12520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VARPA_RS12525 PF07497 Rho termination factor, RNA-binding domain VARPA_RS12525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VARPA_RS12525 PF07498 Rho termination factor, N-terminal domain VARPA_RS12530 PF00085 Thioredoxin VARPA_RS12540 PF13361 UvrD-like helicase C-terminal domain VARPA_RS12540 PF00580 UvrD/REP helicase N-terminal domain VARPA_RS12540 PF12705 PD-(D/E)XK nuclease superfamily VARPA_RS12550 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VARPA_RS12550 PF12170 DNA polymerase III tau subunit V interacting with alpha VARPA_RS12550 PF12169 DNA polymerase III subunits gamma and tau domain III VARPA_RS12555 PF02575 YbaB/EbfC DNA-binding family VARPA_RS12560 PF02132 RecR protein VARPA_RS12560 PF13662 Toprim domain VARPA_RS12575 PF00005 ABC transporter VARPA_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS12585 PF00999 Sodium/hydrogen exchanger family VARPA_RS12585 PF02254 TrkA-N domain VARPA_RS12590 PF01476 LysM domain VARPA_RS12590 PF01464 Transglycosylase SLT domain VARPA_RS12595 PF00753 Metallo-beta-lactamase superfamily VARPA_RS12595 PF16123 Hydroxyacylglutathione hydrolase C-terminus VARPA_RS12600 PF08241 Methyltransferase domain VARPA_RS12605 PF00075 RNase H VARPA_RS12610 PF03453 MoeA N-terminal region (domain I and II) VARPA_RS12610 PF03454 MoeA C-terminal region (domain IV) VARPA_RS12610 PF00994 Probable molybdopterin binding domain VARPA_RS12615 PF12804 MobA-like NTP transferase domain VARPA_RS12620 PF06463 Molybdenum Cofactor Synthesis C VARPA_RS12620 PF04055 Radical SAM superfamily VARPA_RS12625 PF00144 Beta-lactamase VARPA_RS12635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VARPA_RS12635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VARPA_RS12640 PF02535 ZIP Zinc transporter VARPA_RS12645 PF00171 Aldehyde dehydrogenase family VARPA_RS12655 PF13091 PLD-like domain VARPA_RS12705 PF01037 Lrp/AsnC ligand binding domain VARPA_RS12710 PF03435 Saccharopine dehydrogenase NADP binding domain VARPA_RS12710 PF16653 Saccharopine dehydrogenase C-terminal domain VARPA_RS12720 PF03030 Inorganic H+ pyrophosphatase VARPA_RS12725 PF00719 Inorganic pyrophosphatase VARPA_RS12740 PF02540 NAD synthase VARPA_RS12740 PF00795 Carbon-nitrogen hydrolase VARPA_RS12745 PF00543 Nitrogen regulatory protein P-II VARPA_RS12750 PF03641 Possible lysine decarboxylase VARPA_RS12755 PF01219 Prokaryotic diacylglycerol kinase VARPA_RS12780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS12780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS12780 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS12785 PF10369 Small subunit of acetolactate synthase VARPA_RS12795 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VARPA_RS12795 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VARPA_RS12800 PF01066 CDP-alcohol phosphatidyltransferase VARPA_RS12805 PF00682 HMGL-like VARPA_RS12805 PF08502 LeuA allosteric (dimerisation) domain VARPA_RS12810 PF08502 LeuA allosteric (dimerisation) domain VARPA_RS12810 PF00682 HMGL-like VARPA_RS12815 PF00768 D-alanyl-D-alanine carboxypeptidase VARPA_RS12820 PF01614 Bacterial transcriptional regulator VARPA_RS12820 PF09339 IclR helix-turn-helix domain VARPA_RS12825 PF04377 Arginine-tRNA-protein transferase, C terminus VARPA_RS12825 PF04376 Arginine-tRNA-protein transferase, N terminus VARPA_RS12830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VARPA_RS12835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS12835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VARPA_RS12840 PF12833 Helix-turn-helix domain VARPA_RS12855 PF01494 FAD binding domain VARPA_RS12860 PF01614 Bacterial transcriptional regulator VARPA_RS12860 PF09339 IclR helix-turn-helix domain VARPA_RS12865 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS12865 PF00072 Response regulator receiver domain VARPA_RS12870 PF08521 Two-component sensor kinase N-terminal VARPA_RS12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS12870 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS12875 PF13180 PDZ domain VARPA_RS12875 PF17820 PDZ domain VARPA_RS12890 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS12890 PF00072 Response regulator receiver domain VARPA_RS12910 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS12915 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VARPA_RS12915 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit VARPA_RS12920 PF03737 Aldolase/RraA VARPA_RS12925 PF04909 Amidohydrolase VARPA_RS12930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12930 PF03466 LysR substrate binding domain VARPA_RS12945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS12945 PF03466 LysR substrate binding domain VARPA_RS12950 PF00107 Zinc-binding dehydrogenase VARPA_RS12950 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS12955 PF14525 AraC-binding-like domain VARPA_RS12955 PF12833 Helix-turn-helix domain VARPA_RS12965 PF01738 Dienelactone hydrolase family VARPA_RS12970 PF00970 Oxidoreductase FAD-binding domain VARPA_RS12970 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS12975 PF00355 Rieske [2Fe-2S] domain VARPA_RS12975 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VARPA_RS12980 PF00866 Ring hydroxylating beta subunit VARPA_RS12995 PF00753 Metallo-beta-lactamase superfamily VARPA_RS13015 PF01551 Peptidase family M23 VARPA_RS13015 PF01476 LysM domain VARPA_RS13035 PF00593 TonB dependent receptor VARPA_RS13035 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS13040 PF02581 Thiamine monophosphate synthase VARPA_RS13045 PF05690 Thiazole biosynthesis protein ThiG VARPA_RS13055 PF01266 FAD dependent oxidoreductase VARPA_RS13060 PF08543 Phosphomethylpyrimidine kinase VARPA_RS13070 PF02743 Cache domain VARPA_RS13070 PF00672 HAMP domain VARPA_RS13070 PF00211 Adenylate and Guanylate cyclase catalytic domain VARPA_RS13080 PF00202 Aminotransferase class-III VARPA_RS13090 PF11953 Domain of unknown function (DUF3470) VARPA_RS13090 PF00037 4Fe-4S binding domain VARPA_RS13095 PF00009 Elongation factor Tu GTP binding domain VARPA_RS13100 PF01507 Phosphoadenosine phosphosulfate reductase family VARPA_RS13105 PF01507 Phosphoadenosine phosphosulfate reductase family VARPA_RS13130 PF03576 Peptidase family S58 VARPA_RS13135 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS13135 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS13140 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS13145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS13150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS13150 PF00005 ABC transporter VARPA_RS13155 PF01112 Asparaginase VARPA_RS13165 PF03232 Ubiquinone biosynthesis protein COQ7 VARPA_RS13190 PF00248 Aldo/keto reductase family VARPA_RS13195 PF03466 LysR substrate binding domain VARPA_RS13195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS13200 PF01266 FAD dependent oxidoreductase VARPA_RS13210 PF01425 Amidase VARPA_RS13215 PF01522 Polysaccharide deacetylase VARPA_RS13220 PF07690 Major Facilitator Superfamily VARPA_RS13240 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS13240 PF07683 Cobalamin synthesis protein cobW C-terminal domain VARPA_RS13250 PF07702 UTRA domain VARPA_RS13250 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS13255 PF00274 Fructose-bisphosphate aldolase class-I VARPA_RS13260 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain VARPA_RS13260 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain VARPA_RS13265 PF00294 pfkB family carbohydrate kinase VARPA_RS13270 PF13407 Periplasmic binding protein domain VARPA_RS13275 PF00005 ABC transporter VARPA_RS13280 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS13285 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS13290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS13295 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS13300 PF00455 DeoR C terminal sensor domain VARPA_RS13300 PF08220 DeoR-like helix-turn-helix domain VARPA_RS13305 PF01625 Peptide methionine sulfoxide reductase VARPA_RS13315 PF00174 Oxidoreductase molybdopterin binding domain VARPA_RS13320 PF01292 Prokaryotic cytochrome b561 VARPA_RS13325 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS13325 PF00072 Response regulator receiver domain VARPA_RS13330 PF18698 Histidine kinase sensor domain VARPA_RS13330 PF00672 HAMP domain VARPA_RS13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS13330 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS13330 PF00989 PAS fold VARPA_RS13335 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS13355 PF01266 FAD dependent oxidoreductase VARPA_RS13355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VARPA_RS13360 PF04362 Bacterial Fe(2+) trafficking VARPA_RS13370 PF03358 NADPH-dependent FMN reductase VARPA_RS13375 PF09084 NMT1/THI5 like VARPA_RS13380 PF00296 Luciferase-like monooxygenase VARPA_RS13385 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS13390 PF09084 NMT1/THI5 like VARPA_RS13395 PF00005 ABC transporter VARPA_RS13400 PF01053 Cys/Met metabolism PLP-dependent enzyme VARPA_RS13405 PF00881 Nitroreductase family VARPA_RS13410 PF03459 TOBE domain VARPA_RS13425 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VARPA_RS13435 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS13450 PF00266 Aminotransferase class-V VARPA_RS13455 PF04820 Tryptophan halogenase VARPA_RS13460 PF07804 HipA-like C-terminal domain VARPA_RS13470 PF02558 Ketopantoate reductase PanE/ApbA VARPA_RS13470 PF08546 Ketopantoate reductase PanE/ApbA C terminal VARPA_RS13475 PF03358 NADPH-dependent FMN reductase VARPA_RS13480 PF02525 Flavodoxin-like fold VARPA_RS13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS13485 PF03466 LysR substrate binding domain VARPA_RS13490 PF10417 C-terminal domain of 1-Cys peroxiredoxin VARPA_RS13490 PF00578 AhpC/TSA family VARPA_RS13505 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS13515 PF17850 CysA C-terminal regulatory domain VARPA_RS13515 PF00005 ABC transporter VARPA_RS13515 PF12857 TOBE-like domain VARPA_RS13520 PF02600 Disulfide bond formation protein DsbB VARPA_RS13525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS13530 PF02687 FtsX-like permease family VARPA_RS13530 PF00005 ABC transporter VARPA_RS13530 PF12704 MacB-like periplasmic core domain VARPA_RS13535 PF02321 Outer membrane efflux protein VARPA_RS13555 PF01209 ubiE/COQ5 methyltransferase family VARPA_RS13560 PF01709 Transcriptional regulator VARPA_RS13565 PF02844 Phosphoribosylglycinamide synthetase, N domain VARPA_RS13565 PF02843 Phosphoribosylglycinamide synthetase, C domain VARPA_RS13565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VARPA_RS13570 PF01218 Coproporphyrinogen III oxidase VARPA_RS13575 PF01467 Cytidylyltransferase-like VARPA_RS13585 PF02590 Predicted SPOUT methyltransferase VARPA_RS13590 PF02545 Maf-like protein VARPA_RS13595 PF10150 Ribonuclease E/G family VARPA_RS13595 PF00575 S1 RNA binding domain VARPA_RS13600 PF00005 ABC transporter VARPA_RS13600 PF00664 ABC transporter transmembrane region VARPA_RS13605 PF04052 TolB amino-terminal domain VARPA_RS13605 PF07676 WD40-like Beta Propeller Repeat VARPA_RS13610 PF00691 OmpA family VARPA_RS13620 PF00899 ThiF family VARPA_RS13630 PF13356 Arm DNA-binding domain VARPA_RS13630 PF00589 Phage integrase family VARPA_RS13790 PF00565 Staphylococcal nuclease homologue VARPA_RS13855 PF01527 Transposase VARPA_RS13860 PF00665 Integrase core domain VARPA_RS13860 PF13276 HTH-like domain VARPA_RS13860 PF13333 Integrase core domain VARPA_RS13870 PF09382 RQC domain VARPA_RS13870 PF16124 RecQ zinc-binding VARPA_RS13870 PF00570 HRDC domain VARPA_RS13870 PF00271 Helicase conserved C-terminal domain VARPA_RS13870 PF00270 DEAD/DEAH box helicase VARPA_RS13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS13915 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS13915 PF00072 Response regulator receiver domain VARPA_RS13915 PF13188 PAS domain VARPA_RS13915 PF08448 PAS fold VARPA_RS13920 PF18073 Rubredoxin metal binding domain VARPA_RS13935 PF00753 Metallo-beta-lactamase superfamily VARPA_RS13945 PF01593 Flavin containing amine oxidoreductase VARPA_RS13965 PF02735 Ku70/Ku80 beta-barrel domain VARPA_RS13970 PF01068 ATP dependent DNA ligase domain VARPA_RS13970 PF04679 ATP dependent DNA ligase C terminal region VARPA_RS13970 PF13298 DNA polymerase Ligase (LigD) VARPA_RS13980 PF02735 Ku70/Ku80 beta-barrel domain VARPA_RS13990 PF00248 Aldo/keto reductase family VARPA_RS13995 PF03466 LysR substrate binding domain VARPA_RS13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS14020 PF02469 Fasciclin domain VARPA_RS14040 PF12848 ABC transporter VARPA_RS14040 PF00005 ABC transporter VARPA_RS14045 PF05175 Methyltransferase small domain VARPA_RS14050 PF01546 Peptidase family M20/M25/M40 VARPA_RS14050 PF07687 Peptidase dimerisation domain VARPA_RS14055 PF00437 Type II/IV secretion system protein VARPA_RS14060 PF14602 Hexapeptide repeat of succinyl-transferase VARPA_RS14060 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal VARPA_RS14060 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS14065 PF00155 Aminotransferase class I and II VARPA_RS14075 PF01810 LysE type translocator VARPA_RS14080 PF00696 Amino acid kinase family VARPA_RS14080 PF00583 Acetyltransferase (GNAT) family VARPA_RS14085 PF06480 FtsH Extracellular VARPA_RS14085 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS14085 PF17862 AAA+ lid domain VARPA_RS14085 PF01434 Peptidase family M41 VARPA_RS14090 PF00270 DEAD/DEAH box helicase VARPA_RS14090 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VARPA_RS14090 PF00271 Helicase conserved C-terminal domain VARPA_RS14090 PF11898 Domain of unknown function (DUF3418) VARPA_RS14090 PF04408 Helicase associated domain (HA2) VARPA_RS14105 PF00155 Aminotransferase class I and II VARPA_RS14110 PF03466 LysR substrate binding domain VARPA_RS14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS14120 PF03739 Lipopolysaccharide export system permease LptF/LptG VARPA_RS14130 PF00883 Cytosol aminopeptidase family, catalytic domain VARPA_RS14130 PF02789 Cytosol aminopeptidase family, N-terminal domain VARPA_RS14145 PF13458 Periplasmic binding protein VARPA_RS14155 PF00665 Integrase core domain VARPA_RS14155 PF13276 HTH-like domain VARPA_RS14155 PF13333 Integrase core domain VARPA_RS14175 PF01145 SPFH domain / Band 7 family VARPA_RS14185 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VARPA_RS14185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VARPA_RS14185 PF01276 Orn/Lys/Arg decarboxylase, major domain VARPA_RS14190 PF14743 DNA ligase OB-like domain VARPA_RS14190 PF01068 ATP dependent DNA ligase domain VARPA_RS14200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS14205 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS14210 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS14210 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS14215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS14215 PF00005 ABC transporter VARPA_RS14220 PF06779 Uncharacterised MFS-type transporter YbfB VARPA_RS14225 PF02576 RimP N-terminal domain VARPA_RS14230 PF13184 NusA-like KH domain VARPA_RS14230 PF08529 NusA N-terminal domain VARPA_RS14235 PF11987 Translation-initiation factor 2 VARPA_RS14235 PF00009 Elongation factor Tu GTP binding domain VARPA_RS14235 PF04760 Translation initiation factor IF-2, N-terminal region VARPA_RS14235 PF08364 Bacterial translation initiation factor IF-2 associated region VARPA_RS14240 PF02033 Ribosome-binding factor A VARPA_RS14245 PF01509 TruB family pseudouridylate synthase (N terminal domain) VARPA_RS14245 PF16198 tRNA pseudouridylate synthase B C-terminal domain VARPA_RS14250 PF00679 Elongation factor G C-terminus VARPA_RS14250 PF03144 Elongation factor Tu domain 2 VARPA_RS14250 PF00009 Elongation factor Tu GTP binding domain VARPA_RS14275 PF04542 Sigma-70 region 2 VARPA_RS14275 PF08281 Sigma-70, region 4 VARPA_RS14285 PF01668 SmpB protein VARPA_RS14290 PF03364 Polyketide cyclase / dehydrase and lipid transport VARPA_RS14295 PF03658 RnfH family Ubiquitin VARPA_RS14305 PF00571 CBS domain VARPA_RS14305 PF00478 IMP dehydrogenase / GMP reductase domain VARPA_RS14320 PF02540 NAD synthase VARPA_RS14320 PF00117 Glutamine amidotransferase class-I VARPA_RS14320 PF00958 GMP synthase C terminal domain VARPA_RS14325 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS14330 PF01050 Mannose-6-phosphate isomerase VARPA_RS14330 PF00483 Nucleotidyl transferase VARPA_RS14340 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS14340 PF00072 Response regulator receiver domain VARPA_RS14345 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS14350 PF13579 Glycosyl transferase 4-like domain VARPA_RS14350 PF00534 Glycosyl transferases group 1 VARPA_RS14380 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS14385 PF02397 Bacterial sugar transferase VARPA_RS14390 PF13807 G-rich domain on putative tyrosine kinase VARPA_RS14390 PF13614 AAA domain VARPA_RS14390 PF02706 Chain length determinant protein VARPA_RS14395 PF10531 SLBB domain VARPA_RS14395 PF02563 Polysaccharide biosynthesis/export protein VARPA_RS14410 PF00550 Phosphopantetheine attachment site VARPA_RS14410 PF00501 AMP-binding enzyme VARPA_RS14410 PF00975 Thioesterase domain VARPA_RS14410 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS14410 PF00668 Condensation domain VARPA_RS14415 PF00202 Aminotransferase class-III VARPA_RS14415 PF00501 AMP-binding enzyme VARPA_RS14415 PF00668 Condensation domain VARPA_RS14415 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS14415 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS14415 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS14415 PF00550 Phosphopantetheine attachment site VARPA_RS14415 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS14425 PF02954 Bacterial regulatory protein, Fis family VARPA_RS14425 PF00158 Sigma-54 interaction domain VARPA_RS14425 PF00072 Response regulator receiver domain VARPA_RS14455 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS14455 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS14470 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 VARPA_RS14475 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VARPA_RS14490 PF04965 Gene 25-like lysozyme VARPA_RS14495 PF05947 Type VI secretion system, TssF VARPA_RS14505 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS14505 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS14505 PF17871 AAA lid domain VARPA_RS14505 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS14510 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS14510 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS14515 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS14515 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS14520 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS14520 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS14570 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VARPA_RS14575 PF00691 OmpA family VARPA_RS14575 PF13677 Membrane MotB of proton-channel complex MotA/MotB VARPA_RS14580 PF14331 ImcF-related N-terminal domain VARPA_RS14580 PF06744 Type VI secretion protein IcmF C-terminal VARPA_RS14580 PF06761 Intracellular multiplication and human macrophage-killing VARPA_RS14590 PF13360 PQQ-like domain VARPA_RS14590 PF00069 Protein kinase domain VARPA_RS14595 PF03466 LysR substrate binding domain VARPA_RS14595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS14600 PF00561 alpha/beta hydrolase fold VARPA_RS14605 PF00106 short chain dehydrogenase VARPA_RS14615 PF02678 Pirin VARPA_RS14615 PF05726 Pirin C-terminal cupin domain VARPA_RS14620 PF03466 LysR substrate binding domain VARPA_RS14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS14630 PF03466 LysR substrate binding domain VARPA_RS14635 PF00175 Oxidoreductase NAD-binding domain VARPA_RS14635 PF00970 Oxidoreductase FAD-binding domain VARPA_RS14635 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS14640 PF00355 Rieske [2Fe-2S] domain VARPA_RS14640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VARPA_RS14645 PF13577 SnoaL-like domain VARPA_RS14655 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS14660 PF00355 Rieske [2Fe-2S] domain VARPA_RS14675 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS14675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS14675 PF13426 PAS domain VARPA_RS14675 PF00072 Response regulator receiver domain VARPA_RS14675 PF08448 PAS fold VARPA_RS14680 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS14680 PF00072 Response regulator receiver domain VARPA_RS14705 PF14437 MafB19-like deaminase VARPA_RS14710 PF02016 LD-carboxypeptidase N-terminal domain VARPA_RS14710 PF17676 LD-carboxypeptidase C-terminal domain VARPA_RS14720 PF16701 Adenylate cyclase regulatory domain VARPA_RS14720 PF00211 Adenylate and Guanylate cyclase catalytic domain VARPA_RS14755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS14755 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS14760 PF01339 CheB methylesterase VARPA_RS14765 PF01739 CheR methyltransferase, SAM binding domain VARPA_RS14765 PF03705 CheR methyltransferase, all-alpha domain VARPA_RS14770 PF00072 Response regulator receiver domain VARPA_RS14770 PF01627 Hpt domain VARPA_RS14770 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS14770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS14770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VARPA_RS14770 PF00672 HAMP domain VARPA_RS14775 PF04851 Type III restriction enzyme, res subunit VARPA_RS14775 PF00929 Exonuclease VARPA_RS14775 PF13307 Helicase C-terminal domain VARPA_RS14800 PF00144 Beta-lactamase VARPA_RS14805 PF00202 Aminotransferase class-III VARPA_RS14810 PF00155 Aminotransferase class I and II VARPA_RS14820 PF00248 Aldo/keto reductase family VARPA_RS14825 PF12833 Helix-turn-helix domain VARPA_RS14825 PF06719 AraC-type transcriptional regulator N-terminus VARPA_RS14830 PF01545 Cation efflux family VARPA_RS14830 PF16916 Dimerisation domain of Zinc Transporter VARPA_RS14840 PF07690 Major Facilitator Superfamily VARPA_RS14855 PF00248 Aldo/keto reductase family VARPA_RS14860 PF07311 Dodecin VARPA_RS14875 PF00581 Rhodanese-like domain VARPA_RS14905 PF00583 Acetyltransferase (GNAT) family VARPA_RS14905 PF13607 Succinyl-CoA ligase like flavodoxin domain VARPA_RS14905 PF13380 CoA binding domain VARPA_RS14910 PF01842 ACT domain VARPA_RS14910 PF00742 Homoserine dehydrogenase VARPA_RS14910 PF03447 Homoserine dehydrogenase, NAD binding domain VARPA_RS14920 PF17755 UvrA DNA-binding domain VARPA_RS14930 PF13396 Phospholipase_D-nuclease N-terminal VARPA_RS14930 PF13091 PLD-like domain VARPA_RS14935 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS14935 PF00072 Response regulator receiver domain VARPA_RS14950 PF04679 ATP dependent DNA ligase C terminal region VARPA_RS14950 PF01068 ATP dependent DNA ligase domain VARPA_RS14980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VARPA_RS14980 PF00128 Alpha amylase, catalytic domain VARPA_RS14980 PF02806 Alpha amylase, C-terminal all-beta domain VARPA_RS14985 PF11896 Domain of unknown function (DUF3416) VARPA_RS14985 PF00128 Alpha amylase, catalytic domain VARPA_RS14990 PF16657 Maltogenic Amylase, C-terminal domain VARPA_RS14990 PF00128 Alpha amylase, catalytic domain VARPA_RS15000 PF00128 Alpha amylase, catalytic domain VARPA_RS15000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VARPA_RS15005 PF00128 Alpha amylase, catalytic domain VARPA_RS15005 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VARPA_RS15005 PF11941 Domain of unknown function (DUF3459) VARPA_RS15010 PF02446 4-alpha-glucanotransferase VARPA_RS15015 PF00115 Cytochrome C and Quinol oxidase polypeptide I VARPA_RS15020 PF00034 Cytochrome c VARPA_RS15020 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VARPA_RS15020 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VARPA_RS15040 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS15040 PF07689 KaiB domain VARPA_RS15040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS15070 PF02525 Flavodoxin-like fold VARPA_RS15075 PF18011 C-terminal domain found in long catalases VARPA_RS15075 PF06628 Catalase-related immune-responsive VARPA_RS15075 PF00199 Catalase VARPA_RS15090 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS15090 PF00107 Zinc-binding dehydrogenase VARPA_RS15090 PF13823 Alcohol dehydrogenase GroES-associated VARPA_RS15100 PF00011 Hsp20/alpha crystallin family VARPA_RS15105 PF00011 Hsp20/alpha crystallin family VARPA_RS15120 PF00106 short chain dehydrogenase VARPA_RS15125 PF00107 Zinc-binding dehydrogenase VARPA_RS15125 PF13823 Alcohol dehydrogenase GroES-associated VARPA_RS15125 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS15135 PF02322 Cytochrome bd terminal oxidase subunit II VARPA_RS15140 PF01654 Cytochrome bd terminal oxidase subunit I VARPA_RS15165 PF00664 ABC transporter transmembrane region VARPA_RS15165 PF00005 ABC transporter VARPA_RS15170 PF01593 Flavin containing amine oxidoreductase VARPA_RS15175 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS15190 PF04070 Domain of unknown function (DUF378) VARPA_RS15210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VARPA_RS15210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VARPA_RS15210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VARPA_RS15215 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS15225 PF01658 Myo-inositol-1-phosphate synthase VARPA_RS15230 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS15235 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS15240 PF00107 Zinc-binding dehydrogenase VARPA_RS15240 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS15245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VARPA_RS15245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VARPA_RS15270 PF08003 Protein of unknown function (DUF1698) VARPA_RS15285 PF04963 Sigma-54 factor, core binding domain VARPA_RS15285 PF00309 Sigma-54 factor, Activator interacting domain (AID) VARPA_RS15285 PF04552 Sigma-54, DNA binding domain VARPA_RS15295 PF00072 Response regulator receiver domain VARPA_RS15295 PF00158 Sigma-54 interaction domain VARPA_RS15295 PF02954 Bacterial regulatory protein, Fis family VARPA_RS15300 PF08448 PAS fold VARPA_RS15300 PF03705 CheR methyltransferase, all-alpha domain VARPA_RS15300 PF01339 CheB methylesterase VARPA_RS15300 PF01739 CheR methyltransferase, SAM binding domain VARPA_RS15305 PF00072 Response regulator receiver domain VARPA_RS15305 PF01339 CheB methylesterase VARPA_RS15315 PF05067 Manganese containing catalase VARPA_RS15320 PF02464 Competence-damaged protein VARPA_RS15320 PF18146 Damage-inducible protein CinA KH domain VARPA_RS15320 PF00994 Probable molybdopterin binding domain VARPA_RS15330 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS15390 PF00106 short chain dehydrogenase VARPA_RS15425 PF05974 Domain of unknown function (DUF892) VARPA_RS15430 PF00561 alpha/beta hydrolase fold VARPA_RS15435 PF02535 ZIP Zinc transporter VARPA_RS15460 PF01026 TatD related DNase VARPA_RS15470 PF09115 DNA polymerase III, delta subunit, C terminal VARPA_RS15475 PF02223 Thymidylate kinase VARPA_RS15480 PF02618 YceG-like family VARPA_RS15485 PF01571 Aminomethyltransferase folate-binding domain VARPA_RS15500 PF07859 alpha/beta hydrolase fold VARPA_RS15505 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS15510 PF00465 Iron-containing alcohol dehydrogenase VARPA_RS15520 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS15530 PF16921 Tex protein YqgF-like domain VARPA_RS15530 PF09371 Tex-like protein N-terminal domain VARPA_RS15530 PF00575 S1 RNA binding domain VARPA_RS15530 PF17674 HHH domain VARPA_RS15535 PF07730 Histidine kinase VARPA_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS15535 PF05384 Sensor protein DegS VARPA_RS15540 PF00072 Response regulator receiver domain VARPA_RS15540 PF01339 CheB methylesterase VARPA_RS15575 PF01554 MatE VARPA_RS15585 PF00593 TonB dependent receptor VARPA_RS15585 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS15590 PF16220 Domain of unknown function (DUF4880) VARPA_RS15590 PF04773 FecR protein VARPA_RS15595 PF08281 Sigma-70, region 4 VARPA_RS15595 PF04542 Sigma-70 region 2 VARPA_RS15600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS15600 PF01842 ACT domain VARPA_RS15600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS15605 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS15610 PF02824 TGS domain VARPA_RS15610 PF04607 Region found in RelA / SpoT proteins VARPA_RS15610 PF13291 ACT domain VARPA_RS15620 PF07690 Major Facilitator Superfamily VARPA_RS15630 PF02470 MlaD protein VARPA_RS15635 PF04403 Paraquat-inducible protein A VARPA_RS15640 PF04403 Paraquat-inducible protein A VARPA_RS15645 PF07690 Major Facilitator Superfamily VARPA_RS15650 PF07690 Major Facilitator Superfamily VARPA_RS15660 PF01435 Peptidase family M48 VARPA_RS15665 PF07690 Major Facilitator Superfamily VARPA_RS15675 PF13677 Membrane MotB of proton-channel complex MotA/MotB VARPA_RS15675 PF00691 OmpA family VARPA_RS15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS15700 PF03466 LysR substrate binding domain VARPA_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS15710 PF03466 LysR substrate binding domain VARPA_RS15735 PF00593 TonB dependent receptor VARPA_RS15735 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS15740 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VARPA_RS15740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VARPA_RS15745 PF06779 Uncharacterised MFS-type transporter YbfB VARPA_RS15750 PF01565 FAD binding domain VARPA_RS15750 PF13183 4Fe-4S dicluster domain VARPA_RS15750 PF02913 FAD linked oxidases, C-terminal domain VARPA_RS15755 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS15755 PF07729 FCD domain VARPA_RS15760 PF00266 Aminotransferase class-V VARPA_RS15765 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS15775 PF03466 LysR substrate binding domain VARPA_RS15775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS15780 PF07690 Major Facilitator Superfamily VARPA_RS15795 PF02525 Flavodoxin-like fold VARPA_RS15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS15800 PF03466 LysR substrate binding domain VARPA_RS15820 PF00106 short chain dehydrogenase VARPA_RS15830 PF18158 Adaptive response protein AidB N-terminal domain VARPA_RS15830 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS15830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS15835 PF00107 Zinc-binding dehydrogenase VARPA_RS15835 PF16884 N-terminal domain of oxidoreductase VARPA_RS15860 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS15860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS15860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS15860 PF12806 Acetyl-CoA dehydrogenase C-terminal like VARPA_RS15870 PF00108 Thiolase, N-terminal domain VARPA_RS15870 PF02803 Thiolase, C-terminal domain VARPA_RS15875 PF07687 Peptidase dimerisation domain VARPA_RS15875 PF01546 Peptidase family M20/M25/M40 VARPA_RS15880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS15880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS15880 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS15885 PF00005 ABC transporter VARPA_RS15890 PF00005 ABC transporter VARPA_RS15890 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS15900 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS15915 PF00501 AMP-binding enzyme VARPA_RS15915 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS15920 PF00135 Carboxylesterase family VARPA_RS15930 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VARPA_RS15935 PF01641 SelR domain VARPA_RS15940 PF04279 Intracellular septation protein A VARPA_RS15955 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VARPA_RS15955 PF02769 AIR synthase related protein, C-terminal domain VARPA_RS15955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VARPA_RS15960 PF00557 Metallopeptidase family M24 VARPA_RS15965 PF01909 Nucleotidyltransferase domain VARPA_RS15965 PF01966 HD domain VARPA_RS15965 PF08335 GlnD PII-uridylyltransferase VARPA_RS15970 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS15970 PF13185 GAF domain VARPA_RS15985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VARPA_RS15990 PF03552 Cellulose synthase VARPA_RS15990 PF07238 PilZ domain VARPA_RS15990 PF00535 Glycosyl transferase family 2 VARPA_RS15995 PF03170 Bacterial cellulose synthase subunit VARPA_RS16000 PF01270 Glycosyl hydrolases family 8 VARPA_RS16005 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) VARPA_RS16010 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS16010 PF00563 EAL domain VARPA_RS16010 PF03707 Bacterial signalling protein N terminal repeat VARPA_RS16025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VARPA_RS16025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VARPA_RS16025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VARPA_RS16025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VARPA_RS16030 PF03479 Plants and Prokaryotes Conserved (PCC) domain VARPA_RS16030 PF12804 MobA-like NTP transferase domain VARPA_RS16030 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS16040 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS16045 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS16055 PF01327 Polypeptide deformylase VARPA_RS16065 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VARPA_RS16065 PF01653 NAD-dependent DNA ligase adenylation domain VARPA_RS16065 PF12826 Helix-hairpin-helix motif VARPA_RS16065 PF03120 NAD-dependent DNA ligase OB-fold domain VARPA_RS16065 PF00533 BRCA1 C Terminus (BRCT) domain VARPA_RS16075 PF02463 RecF/RecN/SMC N terminal domain VARPA_RS16075 PF06470 SMC proteins Flexible Hinge Domain VARPA_RS16090 PF13657 HipA N-terminal domain VARPA_RS16090 PF07804 HipA-like C-terminal domain VARPA_RS16115 PF01522 Polysaccharide deacetylase VARPA_RS16135 PF07977 FabA-like domain VARPA_RS16150 PF05872 Bacterial protein of unknown function (DUF853) VARPA_RS16160 PF08281 Sigma-70, region 4 VARPA_RS16160 PF04542 Sigma-70 region 2 VARPA_RS16190 PF02608 ABC transporter substrate-binding protein PnrA-like VARPA_RS16195 PF01048 Phosphorylase superfamily VARPA_RS16205 PF00005 ABC transporter VARPA_RS16210 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS16215 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS16235 PF07969 Amidohydrolase family VARPA_RS16255 PF08411 Exonuclease C-terminal VARPA_RS16255 PF00929 Exonuclease VARPA_RS16260 PF13396 Phospholipase_D-nuclease N-terminal VARPA_RS16260 PF13091 PLD-like domain VARPA_RS16265 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS16265 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS16265 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS16265 PF17871 AAA lid domain VARPA_RS16265 PF02861 Clp amino terminal domain, pathogenicity island component VARPA_RS16270 PF02617 ATP-dependent Clp protease adaptor protein ClpS VARPA_RS16300 PF06761 Intracellular multiplication and human macrophage-killing VARPA_RS16300 PF14331 ImcF-related N-terminal domain VARPA_RS16300 PF06744 Type VI secretion protein IcmF C-terminal VARPA_RS16305 PF00691 OmpA family VARPA_RS16305 PF05736 OprF membrane domain VARPA_RS16310 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VARPA_RS16320 PF05638 Type VI secretion system effector, Hcp VARPA_RS16325 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VARPA_RS16330 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 VARPA_RS16335 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS16335 PF17871 AAA lid domain VARPA_RS16335 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS16335 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS16340 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS16360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VARPA_RS16360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VARPA_RS16365 PF02601 Exonuclease VII, large subunit VARPA_RS16365 PF13742 OB-fold nucleic acid binding domain VARPA_RS16370 PF01618 MotA/TolQ/ExbB proton channel family VARPA_RS16375 PF02472 Biopolymer transport protein ExbD/TolR VARPA_RS16380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VARPA_RS16385 PF03966 Trm112p-like protein VARPA_RS16390 PF02348 Cytidylyltransferase VARPA_RS16395 PF05191 Adenylate kinase, active site lid VARPA_RS16400 PF17763 Glutaminase/Asparaginase C-terminal domain VARPA_RS16400 PF00710 Asparaginase, N-terminal VARPA_RS16405 PF01726 LexA DNA binding domain VARPA_RS16405 PF00717 Peptidase S24-like VARPA_RS16415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS16415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS16420 PF07690 Major Facilitator Superfamily VARPA_RS16425 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain VARPA_RS16425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS16425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS16430 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS16435 PF00027 Cyclic nucleotide-binding domain VARPA_RS16435 PF13545 Crp-like helix-turn-helix domain VARPA_RS16445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS16445 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS16445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS16455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VARPA_RS16455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VARPA_RS16455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VARPA_RS16455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VARPA_RS16460 PF00809 Pterin binding enzyme VARPA_RS16465 PF01434 Peptidase family M41 VARPA_RS16465 PF06480 FtsH Extracellular VARPA_RS16465 PF17862 AAA+ lid domain VARPA_RS16465 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS16470 PF01728 FtsJ-like methyltransferase VARPA_RS16475 PF01985 CRS1 / YhbY (CRM) domain VARPA_RS16490 PF03449 Transcription elongation factor, N-terminal VARPA_RS16490 PF01272 Transcription elongation factor, GreA/GreB, C-term VARPA_RS16500 PF02142 MGS-like domain VARPA_RS16500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS16500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VARPA_RS16505 PF00117 Glutamine amidotransferase class-I VARPA_RS16505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VARPA_RS16510 PF08032 RNA 2'-O ribose methyltransferase substrate binding VARPA_RS16510 PF00588 SpoU rRNA Methylase family VARPA_RS16515 PF01351 Ribonuclease HII VARPA_RS16520 PF02684 Lipid-A-disaccharide synthetase VARPA_RS16525 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS16525 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VARPA_RS16530 PF07977 FabA-like domain VARPA_RS16535 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VARPA_RS16535 PF14602 Hexapeptide repeat of succinyl-transferase VARPA_RS16535 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS16545 PF07244 Surface antigen variable number repeat VARPA_RS16545 PF01103 Surface antigen VARPA_RS16550 PF02163 Peptidase family M50 VARPA_RS16550 PF17820 PDZ domain VARPA_RS16555 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VARPA_RS16555 PF13288 DXP reductoisomerase C-terminal domain VARPA_RS16555 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VARPA_RS16565 PF01255 Putative undecaprenyl diphosphate synthase VARPA_RS16570 PF01765 Ribosome recycling factor VARPA_RS16575 PF00696 Amino acid kinase family VARPA_RS16580 PF00889 Elongation factor TS VARPA_RS16585 PF00318 Ribosomal protein S2 VARPA_RS16590 PF01425 Amidase VARPA_RS16595 PF01266 FAD dependent oxidoreductase VARPA_RS16605 PF03853 YjeF-related protein N-terminus VARPA_RS16605 PF01256 Carbohydrate kinase VARPA_RS16615 PF00773 RNB domain VARPA_RS16615 PF00575 S1 RNA binding domain VARPA_RS16615 PF08206 Ribonuclease B OB domain VARPA_RS16615 PF08461 Ribonuclease R winged-helix domain VARPA_RS16615 PF17876 Cold shock domain VARPA_RS16630 PF00919 Uncharacterized protein family UPF0004 VARPA_RS16630 PF18693 TRAM domain VARPA_RS16630 PF04055 Radical SAM superfamily VARPA_RS16635 PF05233 PHB accumulation regulatory domain VARPA_RS16635 PF07879 PHB/PHA accumulation regulator DNA-binding domain VARPA_RS16650 PF13291 ACT domain VARPA_RS16650 PF04607 Region found in RelA / SpoT proteins VARPA_RS16650 PF02824 TGS domain VARPA_RS16660 PF00106 short chain dehydrogenase VARPA_RS16675 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS16675 PF00072 Response regulator receiver domain VARPA_RS16680 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS16680 PF00672 HAMP domain VARPA_RS16685 PF02542 YgbB family VARPA_RS16685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VARPA_RS16690 PF02542 YgbB family VARPA_RS16690 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VARPA_RS16695 PF02559 CarD-like/TRCF domain VARPA_RS16695 PF00270 DEAD/DEAH box helicase VARPA_RS16695 PF00271 Helicase conserved C-terminal domain VARPA_RS16695 PF03461 TRCF domain VARPA_RS16695 PF17757 UvrB interaction domain VARPA_RS16720 PF04773 FecR protein VARPA_RS16720 PF16220 Domain of unknown function (DUF4880) VARPA_RS16725 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS16725 PF00593 TonB dependent receptor VARPA_RS16730 PF00155 Aminotransferase class I and II VARPA_RS16735 PF00730 HhH-GPD superfamily base excision DNA repair protein VARPA_RS16735 PF10576 Iron-sulfur binding domain of endonuclease III VARPA_RS16735 PF00633 Helix-hairpin-helix motif VARPA_RS16750 PF02654 Cobalamin-5-phosphate synthase VARPA_RS16755 PF02277 Phosphoribosyltransferase VARPA_RS16760 PF07685 CobB/CobQ-like glutamine amidotransferase domain VARPA_RS16760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VARPA_RS16770 PF02321 Outer membrane efflux protein VARPA_RS16775 PF00873 AcrB/AcrD/AcrF family VARPA_RS16780 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS16780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS16785 PF07859 alpha/beta hydrolase fold VARPA_RS16790 PF03466 LysR substrate binding domain VARPA_RS16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS16800 PF04172 LrgB-like family VARPA_RS16805 PF03788 LrgA family VARPA_RS16815 PF03186 CobD/Cbib protein VARPA_RS16820 PF02514 CobN/Magnesium Chelatase VARPA_RS16835 PF00881 Nitroreductase family VARPA_RS16840 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VARPA_RS16840 PF12557 Cob(I)alamin adenosyltransferase N terminal VARPA_RS16845 PF00005 ABC transporter VARPA_RS16850 PF01032 FecCD transport family VARPA_RS16860 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VARPA_RS16865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VARPA_RS16865 PF07685 CobB/CobQ-like glutamine amidotransferase domain VARPA_RS16870 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS16870 PF00593 TonB dependent receptor VARPA_RS16885 PF01925 Sulfite exporter TauE/SafE VARPA_RS16895 PF12833 Helix-turn-helix domain VARPA_RS16900 PF00795 Carbon-nitrogen hydrolase VARPA_RS16910 PF07930 D-aminopeptidase, domain B VARPA_RS16910 PF00144 Beta-lactamase VARPA_RS16920 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS16920 PF00501 AMP-binding enzyme VARPA_RS16925 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS16930 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS16940 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS16940 PF07729 FCD domain VARPA_RS16945 PF01790 Prolipoprotein diacylglyceryl transferase VARPA_RS16960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS16960 PF03466 LysR substrate binding domain VARPA_RS16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS16965 PF03466 LysR substrate binding domain VARPA_RS16970 PF00920 Dehydratase family VARPA_RS16985 PF00034 Cytochrome c VARPA_RS16995 PF16177 Acetyl-coenzyme A synthetase N-terminus VARPA_RS16995 PF00501 AMP-binding enzyme VARPA_RS16995 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS17000 PF03350 Uncharacterized protein family, UPF0114 VARPA_RS17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS17005 PF03466 LysR substrate binding domain VARPA_RS17010 PF13460 NAD(P)H-binding VARPA_RS17015 PF00206 Lyase VARPA_RS17015 PF10415 Fumarase C C-terminus VARPA_RS17020 PF00571 CBS domain VARPA_RS17020 PF00005 ABC transporter VARPA_RS17025 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS17030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VARPA_RS17040 PF01177 Asp/Glu/Hydantoin racemase VARPA_RS17080 PF05362 Lon protease (S16) C-terminal proteolytic domain VARPA_RS17080 PF02190 ATP-dependent protease La (LON) substrate-binding domain VARPA_RS17080 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS17085 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS17085 PF06689 ClpX C4-type zinc finger VARPA_RS17085 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS17090 PF00574 Clp protease VARPA_RS17095 PF05698 Bacterial trigger factor protein (TF) C-terminus VARPA_RS17095 PF05697 Bacterial trigger factor protein (TF) VARPA_RS17095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS17105 PF00873 AcrB/AcrD/AcrF family VARPA_RS17110 PF13533 Biotin-lipoyl like VARPA_RS17115 PF02705 K+ potassium transporter VARPA_RS17135 PF01593 Flavin containing amine oxidoreductase VARPA_RS17145 PF01810 LysE type translocator VARPA_RS17155 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS17160 PF00762 Ferrochelatase VARPA_RS17165 PF17991 Thioredoxin like C-terminal domain VARPA_RS17165 PF02683 Cytochrome C biogenesis protein transmembrane region VARPA_RS17165 PF00578 AhpC/TSA family VARPA_RS17190 PF00005 ABC transporter VARPA_RS17195 PF00005 ABC transporter VARPA_RS17195 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS17200 PF10503 Esterase PHB depolymerase VARPA_RS17215 PF00158 Sigma-54 interaction domain VARPA_RS17215 PF02954 Bacterial regulatory protein, Fis family VARPA_RS17215 PF00072 Response regulator receiver domain VARPA_RS17225 PF02321 Outer membrane efflux protein VARPA_RS17235 PF00873 AcrB/AcrD/AcrF family VARPA_RS17245 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS17260 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS17260 PF00072 Response regulator receiver domain VARPA_RS17265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17265 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS17265 PF08521 Two-component sensor kinase N-terminal VARPA_RS17270 PF01479 S4 domain VARPA_RS17275 PF03976 Polyphosphate kinase 2 (PPK2) VARPA_RS17290 PF00034 Cytochrome c VARPA_RS17295 PF05384 Sensor protein DegS VARPA_RS17295 PF07730 Histidine kinase VARPA_RS17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17300 PF01799 [2Fe-2S] binding domain VARPA_RS17300 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS17305 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS17320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS17325 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS17330 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS17335 PF00005 ABC transporter VARPA_RS17335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS17340 PF01425 Amidase VARPA_RS17350 PF06977 SdiA-regulated VARPA_RS17355 PF00005 ABC transporter VARPA_RS17365 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS17370 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS17375 PF00005 ABC transporter VARPA_RS17375 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS17380 PF00296 Luciferase-like monooxygenase VARPA_RS17385 PF03358 NADPH-dependent FMN reductase VARPA_RS17390 PF00296 Luciferase-like monooxygenase VARPA_RS17395 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS17395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS17400 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS17400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS17405 PF08402 TOBE domain VARPA_RS17405 PF00005 ABC transporter VARPA_RS17415 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS17420 PF01547 Bacterial extracellular solute-binding protein VARPA_RS17425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS17425 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS17430 PF00296 Luciferase-like monooxygenase VARPA_RS17435 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS17435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS17440 PF00158 Sigma-54 interaction domain VARPA_RS17450 PF00171 Aldehyde dehydrogenase family VARPA_RS17470 PF13609 Gram-negative porin VARPA_RS17475 PF04185 Phosphoesterase family VARPA_RS17475 PF05506 Domain of unknown function (DUF756) VARPA_RS17490 PF00696 Amino acid kinase family VARPA_RS17490 PF13840 ACT domain VARPA_RS17490 PF01842 ACT domain VARPA_RS17495 PF09179 TilS substrate binding domain VARPA_RS17495 PF01171 PP-loop family VARPA_RS17500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VARPA_RS17505 PF02805 Metal binding domain of Ada VARPA_RS17505 PF12833 Helix-turn-helix domain VARPA_RS17505 PF06029 AlkA N-terminal domain VARPA_RS17505 PF00730 HhH-GPD superfamily base excision DNA repair protein VARPA_RS17510 PF01406 tRNA synthetases class I (C) catalytic domain VARPA_RS17510 PF09190 DALR domain VARPA_RS17520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VARPA_RS17525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VARPA_RS17530 PF00149 Calcineurin-like phosphoesterase VARPA_RS17535 PF06167 Glucose-regulated metallo-peptidase M90 VARPA_RS17550 PF01464 Transglycosylase SLT domain VARPA_RS17550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VARPA_RS17555 PF00464 Serine hydroxymethyltransferase VARPA_RS17560 PF03477 ATP cone domain VARPA_RS17575 PF05567 Neisseria PilC beta-propeller domain VARPA_RS17595 PF01872 RibD C-terminal domain VARPA_RS17595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VARPA_RS17600 PF00677 Lumazine binding domain VARPA_RS17605 PF00925 GTP cyclohydrolase II VARPA_RS17605 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VARPA_RS17610 PF00885 6,7-dimethyl-8-ribityllumazine synthase VARPA_RS17615 PF01029 NusB family VARPA_RS17620 PF00155 Aminotransferase class I and II VARPA_RS17625 PF03061 Thioesterase superfamily VARPA_RS17630 PF01618 MotA/TolQ/ExbB proton channel family VARPA_RS17635 PF02472 Biopolymer transport protein ExbD/TolR VARPA_RS17645 PF03717 Penicillin-binding Protein dimerisation domain VARPA_RS17645 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS17655 PF13195 Protein of unknown function (DUF4011) VARPA_RS17655 PF13086 AAA domain VARPA_RS17655 PF13087 AAA domain VARPA_RS17655 PF13087 AAA domain VARPA_RS17655 PF13086 AAA domain VARPA_RS17655 PF13195 Protein of unknown function (DUF4011) VARPA_RS17665 PF01336 OB-fold nucleic acid binding domain VARPA_RS17665 PF14579 Helix-hairpin-helix motif VARPA_RS17665 PF07733 Bacterial DNA polymerase III alpha NTPase domain VARPA_RS17665 PF02811 PHP domain VARPA_RS17665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VARPA_RS17670 PF17773 UPF0176 acylphosphatase like domain VARPA_RS17670 PF00581 Rhodanese-like domain VARPA_RS17675 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS17675 PF00072 Response regulator receiver domain VARPA_RS17680 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17690 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS17700 PF05726 Pirin C-terminal cupin domain VARPA_RS17700 PF02678 Pirin VARPA_RS17705 PF03358 NADPH-dependent FMN reductase VARPA_RS17710 PF07681 DoxX VARPA_RS17715 PF17954 Quercetinase C-terminal cupin domain VARPA_RS17715 PF02678 Pirin VARPA_RS17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS17720 PF03466 LysR substrate binding domain VARPA_RS17725 PF01593 Flavin containing amine oxidoreductase VARPA_RS17730 PF00749 tRNA synthetases class I (E and Q), catalytic domain VARPA_RS17735 PF02390 Putative methyltransferase VARPA_RS17750 PF00027 Cyclic nucleotide-binding domain VARPA_RS17750 PF13545 Crp-like helix-turn-helix domain VARPA_RS17760 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS17770 PF14310 Fibronectin type III-like domain VARPA_RS17770 PF00933 Glycosyl hydrolase family 3 N terminal domain VARPA_RS17770 PF01915 Glycosyl hydrolase family 3 C-terminal domain VARPA_RS17790 PF03069 Acetamidase/Formamidase family VARPA_RS17795 PF00005 ABC transporter VARPA_RS17800 PF00005 ABC transporter VARPA_RS17800 PF08402 TOBE domain VARPA_RS17820 PF01627 Hpt domain VARPA_RS17820 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS17820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17820 PF00072 Response regulator receiver domain VARPA_RS17825 PF00072 Response regulator receiver domain VARPA_RS17840 PF03466 LysR substrate binding domain VARPA_RS17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS17850 PF00072 Response regulator receiver domain VARPA_RS17850 PF13188 PAS domain VARPA_RS17850 PF08448 PAS fold VARPA_RS17850 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17855 PF00072 Response regulator receiver domain VARPA_RS17860 PF00360 Phytochrome region VARPA_RS17860 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS17860 PF08446 PAS fold VARPA_RS17860 PF01590 GAF domain VARPA_RS17860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS17880 PF11838 ERAP1-like C-terminal domain VARPA_RS17880 PF01433 Peptidase family M1 domain VARPA_RS17885 PF07690 Major Facilitator Superfamily VARPA_RS17890 PF13609 Gram-negative porin VARPA_RS17895 PF00175 Oxidoreductase NAD-binding domain VARPA_RS17895 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS17900 PF00355 Rieske [2Fe-2S] domain VARPA_RS17910 PF01494 FAD binding domain VARPA_RS17915 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS17925 PF00171 Aldehyde dehydrogenase family VARPA_RS17930 PF03447 Homoserine dehydrogenase, NAD binding domain VARPA_RS17930 PF01958 Domain of unknown function DUF108 VARPA_RS17935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS17935 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS17935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS17945 PF09339 IclR helix-turn-helix domain VARPA_RS17945 PF01614 Bacterial transcriptional regulator VARPA_RS17965 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS17970 PF01266 FAD dependent oxidoreductase VARPA_RS17975 PF08546 Ketopantoate reductase PanE/ApbA C terminal VARPA_RS17975 PF02558 Ketopantoate reductase PanE/ApbA VARPA_RS17980 PF01411 tRNA synthetases class II (A) VARPA_RS17980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VARPA_RS17980 PF02272 DHHA1 domain VARPA_RS18000 PF00485 Phosphoribulokinase / Uridine kinase family VARPA_RS18005 PF06745 KaiC VARPA_RS18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS18010 PF00072 Response regulator receiver domain VARPA_RS18010 PF09308 LuxQ, periplasmic VARPA_RS18010 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS18030 PF02634 FdhD/NarQ family VARPA_RS18035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS18035 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VARPA_RS18035 PF01568 Molydopterin dinucleotide binding domain VARPA_RS18035 PF00384 Molybdopterin oxidoreductase VARPA_RS18035 PF12838 4Fe-4S dicluster domain VARPA_RS18040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VARPA_RS18040 PF10531 SLBB domain VARPA_RS18040 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VARPA_RS18070 PF00384 Molybdopterin oxidoreductase VARPA_RS18070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS18070 PF01568 Molydopterin dinucleotide binding domain VARPA_RS18075 PF13247 4Fe-4S dicluster domain VARPA_RS18095 PF03453 MoeA N-terminal region (domain I and II) VARPA_RS18095 PF00994 Probable molybdopterin binding domain VARPA_RS18095 PF03454 MoeA C-terminal region (domain IV) VARPA_RS18100 PF00994 Probable molybdopterin binding domain VARPA_RS18100 PF03454 MoeA C-terminal region (domain IV) VARPA_RS18100 PF03453 MoeA N-terminal region (domain I and II) VARPA_RS18105 PF12849 PBP superfamily domain VARPA_RS18110 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS18115 PF00216 Bacterial DNA-binding protein VARPA_RS18120 PF07519 Tannase and feruloyl esterase VARPA_RS18160 PF12833 Helix-turn-helix domain VARPA_RS18160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VARPA_RS18165 PF00881 Nitroreductase family VARPA_RS18170 PF00501 AMP-binding enzyme VARPA_RS18170 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS18185 PF04303 PrpF protein VARPA_RS18190 PF00694 Aconitase C-terminal domain VARPA_RS18190 PF00330 Aconitase family (aconitate hydratase) VARPA_RS18195 PF00285 Citrate synthase, C-terminal domain VARPA_RS18215 PF01168 Alanine racemase, N-terminal domain VARPA_RS18215 PF14031 Putative serine dehydratase domain VARPA_RS18230 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS18250 PF01037 Lrp/AsnC ligand binding domain VARPA_RS18260 PF02515 CoA-transferase family III VARPA_RS18285 PF04055 Radical SAM superfamily VARPA_RS18285 PF11842 Domain of unknown function (DUF3362) VARPA_RS18285 PF08497 Radical SAM N-terminal VARPA_RS18290 PF01047 MarR family VARPA_RS18290 PF00583 Acetyltransferase (GNAT) family VARPA_RS18300 PF06314 Acetoacetate decarboxylase (ADC) VARPA_RS18320 PF03631 Virulence factor BrkB VARPA_RS18330 PF02417 Chromate transporter VARPA_RS18335 PF00248 Aldo/keto reductase family VARPA_RS18365 PF08032 RNA 2'-O ribose methyltransferase substrate binding VARPA_RS18365 PF00588 SpoU rRNA Methylase family VARPA_RS18380 PF00005 ABC transporter VARPA_RS18385 PF13472 GDSL-like Lipase/Acylhydrolase family VARPA_RS18400 PF01053 Cys/Met metabolism PLP-dependent enzyme VARPA_RS18425 PF00709 Adenylosuccinate synthetase VARPA_RS18430 PF13393 Histidyl-tRNA synthetase VARPA_RS18440 PF01145 SPFH domain / Band 7 family VARPA_RS18445 PF12221 Bacterial membrane protein N terminal VARPA_RS18445 PF01145 SPFH domain / Band 7 family VARPA_RS18450 PF01926 50S ribosome-binding GTPase VARPA_RS18450 PF16360 GTP-binding GTPase Middle Region VARPA_RS18450 PF13167 GTP-binding GTPase N-terminal VARPA_RS18455 PF17209 Hfq protein VARPA_RS18460 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VARPA_RS18460 PF01926 50S ribosome-binding GTPase VARPA_RS18465 PF13360 PQQ-like domain VARPA_RS18475 PF03129 Anticodon binding domain VARPA_RS18475 PF13393 Histidyl-tRNA synthetase VARPA_RS18480 PF04551 GcpE protein VARPA_RS18495 PF04055 Radical SAM superfamily VARPA_RS18500 PF00334 Nucleoside diphosphate kinase VARPA_RS18505 PF00849 RNA pseudouridylate synthase VARPA_RS18505 PF01479 S4 domain VARPA_RS18510 PF04079 Segregation and condensation complex subunit ScpB VARPA_RS18515 PF01479 S4 domain VARPA_RS18515 PF00849 RNA pseudouridylate synthase VARPA_RS18520 PF13525 Outer membrane lipoprotein VARPA_RS18525 PF13307 Helicase C-terminal domain VARPA_RS18525 PF06733 DEAD_2 VARPA_RS18545 PF03969 AFG1-like ATPase VARPA_RS18550 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS18550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VARPA_RS18555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VARPA_RS18555 PF00364 Biotin-requiring enzyme VARPA_RS18555 PF02817 e3 binding domain VARPA_RS18560 PF16078 2-oxoglutarate dehydrogenase N-terminus VARPA_RS18560 PF00676 Dehydrogenase E1 component VARPA_RS18560 PF16870 2-oxoglutarate dehydrogenase C-terminal VARPA_RS18560 PF02779 Transketolase, pyrimidine binding domain VARPA_RS18565 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS18565 PF00501 AMP-binding enzyme VARPA_RS18565 PF16177 Acetyl-coenzyme A synthetase N-terminus VARPA_RS18590 PF07995 Glucose / Sorbosone dehydrogenase VARPA_RS18595 PF00877 NlpC/P60 family VARPA_RS18600 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS18600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VARPA_RS18605 PF00227 Proteasome subunit VARPA_RS18610 PF02817 e3 binding domain VARPA_RS18610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VARPA_RS18610 PF00364 Biotin-requiring enzyme VARPA_RS18615 PF17831 Pyruvate dehydrogenase E1 component middle domain VARPA_RS18615 PF00456 Transketolase, thiamine diphosphate binding domain VARPA_RS18620 PF00989 PAS fold VARPA_RS18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS18620 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS18625 PF00072 Response regulator receiver domain VARPA_RS18625 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS18630 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VARPA_RS18630 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VARPA_RS18635 PF01432 Peptidase family M3 VARPA_RS18645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VARPA_RS18650 PF01180 Dihydroorotate dehydrogenase VARPA_RS18665 PF01266 FAD dependent oxidoreductase VARPA_RS18680 PF00929 Exonuclease VARPA_RS18685 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS18690 PF00012 Hsp70 protein VARPA_RS18695 PF07743 HSCB C-terminal oligomerisation domain VARPA_RS18700 PF01521 Iron-sulphur cluster biosynthesis VARPA_RS18705 PF01592 NifU-like N terminal domain VARPA_RS18710 PF00266 Aminotransferase class-V VARPA_RS18715 PF02082 Transcriptional regulator VARPA_RS18720 PF17757 UvrB interaction domain VARPA_RS18720 PF12344 Ultra-violet resistance protein B VARPA_RS18720 PF02151 UvrB/uvrC motif VARPA_RS18720 PF04851 Type III restriction enzyme, res subunit VARPA_RS18720 PF00271 Helicase conserved C-terminal domain VARPA_RS18725 PF00155 Aminotransferase class I and II VARPA_RS18735 PF04060 Putative Fe-S cluster VARPA_RS18745 PF00892 EamA-like transporter family VARPA_RS18750 PF01037 Lrp/AsnC ligand binding domain VARPA_RS18760 PF06968 Biotin and Thiamin Synthesis associated domain VARPA_RS18760 PF04055 Radical SAM superfamily VARPA_RS18765 PF00364 Biotin-requiring enzyme VARPA_RS18765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS18765 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS18765 PF02785 Biotin carboxylase C-terminal domain VARPA_RS18765 PF18140 Propionyl-coenzyme A carboxylase BT domain VARPA_RS18770 PF01039 Carboxyl transferase domain VARPA_RS18785 PF01642 Methylmalonyl-CoA mutase VARPA_RS18785 PF02310 B12 binding domain VARPA_RS18790 PF07729 FCD domain VARPA_RS18790 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS18795 PF09339 IclR helix-turn-helix domain VARPA_RS18800 PF01207 Dihydrouridine synthase (Dus) VARPA_RS18805 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS18805 PF18415 Histidine kinase receptor ArcB trans-membrane domain VARPA_RS18805 PF00072 Response regulator receiver domain VARPA_RS18805 PF01627 Hpt domain VARPA_RS18805 PF00989 PAS fold VARPA_RS18805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS18825 PF01047 MarR family VARPA_RS18830 PF00561 alpha/beta hydrolase fold VARPA_RS18840 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS18850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS18850 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS18850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS18855 PF01037 Lrp/AsnC ligand binding domain VARPA_RS18900 PF00072 Response regulator receiver domain VARPA_RS18900 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS18930 PF00892 EamA-like transporter family VARPA_RS18945 PF07690 Major Facilitator Superfamily VARPA_RS18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS18950 PF03466 LysR substrate binding domain VARPA_RS18965 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS18965 PF17151 Periplasmic sensor domain VARPA_RS18980 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS18990 PF00005 ABC transporter VARPA_RS18990 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS18995 PF00005 ABC transporter VARPA_RS19000 PF00732 GMC oxidoreductase VARPA_RS19000 PF05199 GMC oxidoreductase VARPA_RS19005 PF00171 Aldehyde dehydrogenase family VARPA_RS19015 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS19025 PF04209 homogentisate 1,2-dioxygenase VARPA_RS19030 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19035 PF03358 NADPH-dependent FMN reductase VARPA_RS19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS19045 PF03466 LysR substrate binding domain VARPA_RS19050 PF02525 Flavodoxin-like fold VARPA_RS19060 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19075 PF03466 LysR substrate binding domain VARPA_RS19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS19085 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS19095 PF13407 Periplasmic binding protein domain VARPA_RS19100 PF01638 HxlR-like helix-turn-helix VARPA_RS19105 PF00893 Small Multidrug Resistance protein VARPA_RS19130 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS19130 PF00155 Aminotransferase class I and II VARPA_RS19165 PF01497 Periplasmic binding protein VARPA_RS19185 PF13519 von Willebrand factor type A domain VARPA_RS19185 PF17863 AAA lid domain VARPA_RS19185 PF07728 AAA domain (dynein-related subfamily) VARPA_RS19190 PF17863 AAA lid domain VARPA_RS19190 PF07728 AAA domain (dynein-related subfamily) VARPA_RS19190 PF13519 von Willebrand factor type A domain VARPA_RS19195 PF02514 CobN/Magnesium Chelatase VARPA_RS19200 PF07683 Cobalamin synthesis protein cobW C-terminal domain VARPA_RS19200 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS19215 PF00593 TonB dependent receptor VARPA_RS19215 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS19230 PF00999 Sodium/hydrogen exchanger family VARPA_RS19230 PF02254 TrkA-N domain VARPA_RS19235 PF00375 Sodium:dicarboxylate symporter family VARPA_RS19240 PF00106 short chain dehydrogenase VARPA_RS19245 PF01965 DJ-1/PfpI family VARPA_RS19250 PF00994 Probable molybdopterin binding domain VARPA_RS19250 PF18146 Damage-inducible protein CinA KH domain VARPA_RS19250 PF02464 Competence-damaged protein VARPA_RS19255 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19260 PF03328 HpcH/HpaI aldolase/citrate lyase family VARPA_RS19265 PF02515 CoA-transferase family III VARPA_RS19275 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19280 PF03466 LysR substrate binding domain VARPA_RS19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS19285 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS19295 PF02803 Thiolase, C-terminal domain VARPA_RS19295 PF00108 Thiolase, N-terminal domain VARPA_RS19300 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VARPA_RS19310 PF02578 Multi-copper polyphenol oxidoreductase laccase VARPA_RS19315 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS19325 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS19335 PF05981 CreA protein VARPA_RS19340 PF01551 Peptidase family M23 VARPA_RS19340 PF01476 LysM domain VARPA_RS19345 PF13091 PLD-like domain VARPA_RS19360 PF13532 2OG-Fe(II) oxygenase superfamily VARPA_RS19365 PF00664 ABC transporter transmembrane region VARPA_RS19365 PF00005 ABC transporter VARPA_RS19370 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS19375 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS19380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS19390 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain VARPA_RS19390 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain VARPA_RS19395 PF17042 Nucleotide-binding C-terminal domain VARPA_RS19395 PF07005 Sugar-binding N-terminal domain VARPA_RS19435 PF03891 Domain of unknown function (DUF333) VARPA_RS19465 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19470 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS19475 PF13380 CoA binding domain VARPA_RS19475 PF13607 Succinyl-CoA ligase like flavodoxin domain VARPA_RS19480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS19480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS19485 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19495 PF00665 Integrase core domain VARPA_RS19495 PF13276 HTH-like domain VARPA_RS19500 PF01527 Transposase VARPA_RS19540 PF00665 Integrase core domain VARPA_RS19540 PF13276 HTH-like domain VARPA_RS19540 PF01527 Transposase VARPA_RS19545 PF01527 Transposase VARPA_RS19550 PF01527 Transposase VARPA_RS19555 PF13276 HTH-like domain VARPA_RS19555 PF00665 Integrase core domain VARPA_RS19555 PF13333 Integrase core domain VARPA_RS19565 PF00665 Integrase core domain VARPA_RS19565 PF01527 Transposase VARPA_RS19565 PF13276 HTH-like domain VARPA_RS19605 PF08479 POTRA domain, ShlB-type VARPA_RS19605 PF17287 POTRA domain VARPA_RS19605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB VARPA_RS19630 PF13276 HTH-like domain VARPA_RS19630 PF00665 Integrase core domain VARPA_RS19630 PF13333 Integrase core domain VARPA_RS19635 PF01527 Transposase VARPA_RS19660 PF00216 Bacterial DNA-binding protein VARPA_RS19665 PF03484 tRNA synthetase B5 domain VARPA_RS19665 PF03147 Ferredoxin-fold anticodon binding domain VARPA_RS19665 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VARPA_RS19665 PF01588 Putative tRNA binding domain VARPA_RS19665 PF03483 B3/4 domain VARPA_RS19670 PF01409 tRNA synthetases class II core domain (F) VARPA_RS19670 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VARPA_RS19675 PF00453 Ribosomal protein L20 VARPA_RS19680 PF01632 Ribosomal protein L35 VARPA_RS19685 PF00707 Translation initiation factor IF-3, C-terminal domain VARPA_RS19685 PF05198 Translation initiation factor IF-3, N-terminal domain VARPA_RS19690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VARPA_RS19690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VARPA_RS19690 PF03129 Anticodon binding domain VARPA_RS19690 PF02824 TGS domain VARPA_RS19695 PF00463 Isocitrate lyase family VARPA_RS19725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS19725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS19725 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS19730 PF17938 Tetracyclin repressor-like, C-terminal domain VARPA_RS19730 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS19735 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS19740 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS19745 PF09084 NMT1/THI5 like VARPA_RS19750 PF00005 ABC transporter VARPA_RS19760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VARPA_RS19760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VARPA_RS19775 PF06224 Winged helix DNA-binding domain VARPA_RS19780 PF00885 6,7-dimethyl-8-ribityllumazine synthase VARPA_RS19790 PF03960 ArsC family VARPA_RS19805 PF08331 Domain of unknown function (DUF1730) VARPA_RS19810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VARPA_RS19815 PF01520 N-acetylmuramoyl-L-alanine amidase VARPA_RS19815 PF11741 AMIN domain VARPA_RS19825 PF09335 SNARE associated Golgi protein VARPA_RS19835 PF01119 DNA mismatch repair protein, C-terminal domain VARPA_RS19835 PF08676 MutL C terminal dimerisation domain VARPA_RS19845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS19850 PF01799 [2Fe-2S] binding domain VARPA_RS19850 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS19855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VARPA_RS19860 PF06719 AraC-type transcriptional regulator N-terminus VARPA_RS19860 PF12833 Helix-turn-helix domain VARPA_RS19870 PF00005 ABC transporter VARPA_RS19875 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS19880 PF07729 FCD domain VARPA_RS19880 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS19885 PF05721 Phytanoyl-CoA dioxygenase (PhyH) VARPA_RS19895 PF03795 YCII-related domain VARPA_RS19900 PF04542 Sigma-70 region 2 VARPA_RS19900 PF08281 Sigma-70, region 4 VARPA_RS19905 PF00144 Beta-lactamase VARPA_RS19920 PF01804 Penicillin amidase VARPA_RS19945 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS19960 PF00005 ABC transporter VARPA_RS19965 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS19965 PF00005 ABC transporter VARPA_RS19975 PF07690 Major Facilitator Superfamily VARPA_RS19980 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS19980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS19985 PF02321 Outer membrane efflux protein VARPA_RS19990 PF01047 MarR family VARPA_RS19995 PF00664 ABC transporter transmembrane region VARPA_RS19995 PF00005 ABC transporter VARPA_RS20005 PF00293 NUDIX domain VARPA_RS20015 PF00361 Proton-conducting membrane transporter VARPA_RS20020 PF00361 Proton-conducting membrane transporter VARPA_RS20020 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus VARPA_RS20025 PF00361 Proton-conducting membrane transporter VARPA_RS20025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VARPA_RS20030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VARPA_RS20035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 VARPA_RS20040 PF12838 4Fe-4S dicluster domain VARPA_RS20045 PF00146 NADH dehydrogenase VARPA_RS20050 PF00384 Molybdopterin oxidoreductase VARPA_RS20050 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VARPA_RS20050 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal VARPA_RS20055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VARPA_RS20055 PF10531 SLBB domain VARPA_RS20055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VARPA_RS20065 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit VARPA_RS20070 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit VARPA_RS20075 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit VARPA_RS20080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 VARPA_RS20090 PF03840 Preprotein translocase SecG subunit VARPA_RS20095 PF00121 Triosephosphate isomerase VARPA_RS20100 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS20100 PF00107 Zinc-binding dehydrogenase VARPA_RS20105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VARPA_RS20105 PF00575 S1 RNA binding domain VARPA_RS20105 PF03725 3' exoribonuclease family, domain 2 VARPA_RS20105 PF01138 3' exoribonuclease family, domain 1 VARPA_RS20105 PF00013 KH domain VARPA_RS20110 PF00312 Ribosomal protein S15 VARPA_RS20115 PF00892 EamA-like transporter family VARPA_RS20120 PF00155 Aminotransferase class I and II VARPA_RS20125 PF13458 Periplasmic binding protein VARPA_RS20135 PF00814 Glycoprotease family VARPA_RS20140 PF08376 Nitrate and nitrite sensing VARPA_RS20140 PF03861 ANTAR domain VARPA_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20155 PF00005 ABC transporter VARPA_RS20160 PF03861 ANTAR domain VARPA_RS20160 PF00072 Response regulator receiver domain VARPA_RS20165 PF07690 Major Facilitator Superfamily VARPA_RS20170 PF03793 PASTA domain VARPA_RS20170 PF00069 Protein kinase domain VARPA_RS20175 PF18267 Rubredoxin NAD+ reductase C-terminal domain VARPA_RS20175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VARPA_RS20175 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS20175 PF04324 BFD-like [2Fe-2S] binding domain VARPA_RS20175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VARPA_RS20180 PF00355 Rieske [2Fe-2S] domain VARPA_RS20185 PF00384 Molybdopterin oxidoreductase VARPA_RS20185 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS20185 PF01568 Molydopterin dinucleotide binding domain VARPA_RS20195 PF00591 Glycosyl transferase family, a/b domain VARPA_RS20195 PF02885 Glycosyl transferase family, helical bundle domain VARPA_RS20200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VARPA_RS20210 PF08402 TOBE domain VARPA_RS20210 PF00005 ABC transporter VARPA_RS20220 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20225 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20235 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family VARPA_RS20245 PF01165 Ribosomal protein S21 VARPA_RS20255 PF00293 NUDIX domain VARPA_RS20270 PF16363 GDP-mannose 4,6 dehydratase VARPA_RS20275 PF01758 Sodium Bile acid symporter family VARPA_RS20285 PF00106 short chain dehydrogenase VARPA_RS20290 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS20290 PF00107 Zinc-binding dehydrogenase VARPA_RS20295 PF17912 MalK OB fold domain VARPA_RS20295 PF00005 ABC transporter VARPA_RS20295 PF03459 TOBE domain VARPA_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20305 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20310 PF01547 Bacterial extracellular solute-binding protein VARPA_RS20315 PF07690 Major Facilitator Superfamily VARPA_RS20320 PF12833 Helix-turn-helix domain VARPA_RS20320 PF10114 Sensory domain found in PocR VARPA_RS20325 PF01523 Putative modulator of DNA gyrase VARPA_RS20330 PF04751 Protein of unknown function (DUF615) VARPA_RS20335 PF00994 Probable molybdopterin binding domain VARPA_RS20350 PF00873 AcrB/AcrD/AcrF family VARPA_RS20355 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS20355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS20360 PF02321 Outer membrane efflux protein VARPA_RS20370 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS20370 PF00072 Response regulator receiver domain VARPA_RS20375 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS20375 PF00672 HAMP domain VARPA_RS20375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS20380 PF00999 Sodium/hydrogen exchanger family VARPA_RS20395 PF00072 Response regulator receiver domain VARPA_RS20395 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS20430 PF00403 Heavy-metal-associated domain VARPA_RS20435 PF13411 MerR HTH family regulatory protein VARPA_RS20445 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS20445 PF00698 Acyl transferase domain VARPA_RS20445 PF14765 Polyketide synthase dehydratase VARPA_RS20445 PF00550 Phosphopantetheine attachment site VARPA_RS20445 PF08659 KR domain VARPA_RS20445 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS20445 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS20445 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS20445 PF09277 Erythronolide synthase, docking VARPA_RS20445 PF08990 Erythronolide synthase docking VARPA_RS20450 PF03466 LysR substrate binding domain VARPA_RS20450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS20460 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS20465 PF00588 SpoU rRNA Methylase family VARPA_RS20470 PF00459 Inositol monophosphatase family VARPA_RS20475 PF12805 FUSC-like inner membrane protein yccS VARPA_RS20495 PF17755 UvrA DNA-binding domain VARPA_RS20495 PF17760 UvrA interaction domain VARPA_RS20495 PF00005 ABC transporter VARPA_RS20500 PF06719 AraC-type transcriptional regulator N-terminus VARPA_RS20500 PF12833 Helix-turn-helix domain VARPA_RS20515 PF03473 MOSC domain VARPA_RS20515 PF03475 3-alpha domain VARPA_RS20535 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS20540 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS20545 PF00884 Sulfatase VARPA_RS20565 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS20565 PF00593 TonB dependent receptor VARPA_RS20570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS20575 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20580 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS20580 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS20585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS20585 PF00005 ABC transporter VARPA_RS20600 PF03551 Transcriptional regulator PadR-like family VARPA_RS20605 PF04954 Siderophore-interacting protein VARPA_RS20605 PF08021 Siderophore-interacting FAD-binding domain VARPA_RS20610 PF01544 CorA-like Mg2+ transporter protein VARPA_RS20620 PF01624 MutS domain I VARPA_RS20620 PF05188 MutS domain II VARPA_RS20620 PF05192 MutS domain III VARPA_RS20620 PF05190 MutS family domain IV VARPA_RS20620 PF00488 MutS domain V VARPA_RS20640 PF08281 Sigma-70, region 4 VARPA_RS20640 PF04542 Sigma-70 region 2 VARPA_RS20645 PF03795 YCII-related domain VARPA_RS20655 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS20655 PF00072 Response regulator receiver domain VARPA_RS20670 PF07730 Histidine kinase VARPA_RS20670 PF00672 HAMP domain VARPA_RS20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS20675 PF02673 Bacitracin resistance protein BacA VARPA_RS20685 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS20685 PF01799 [2Fe-2S] binding domain VARPA_RS20690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS20700 PF02321 Outer membrane efflux protein VARPA_RS20705 PF00873 AcrB/AcrD/AcrF family VARPA_RS20710 PF00873 AcrB/AcrD/AcrF family VARPA_RS20715 PF13533 Biotin-lipoyl like VARPA_RS20725 PF04116 Fatty acid hydroxylase superfamily VARPA_RS20735 PF06580 Histidine kinase VARPA_RS20735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS20735 PF07694 5TMR of 5TMR-LYT VARPA_RS20740 PF00072 Response regulator receiver domain VARPA_RS20740 PF04397 LytTr DNA-binding domain VARPA_RS20750 PF00749 tRNA synthetases class I (E and Q), catalytic domain VARPA_RS20750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VARPA_RS20755 PF00849 RNA pseudouridylate synthase VARPA_RS20785 PF00753 Metallo-beta-lactamase superfamily VARPA_RS20790 PF00909 Ammonium Transporter Family VARPA_RS20795 PF00072 Response regulator receiver domain VARPA_RS20795 PF04397 LytTr DNA-binding domain VARPA_RS20815 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS20815 PF00593 TonB dependent receptor VARPA_RS20830 PF13732 Domain of unknown function (DUF4162) VARPA_RS20830 PF00005 ABC transporter VARPA_RS20835 PF00444 Ribosomal protein L36 VARPA_RS20850 PF01926 50S ribosome-binding GTPase VARPA_RS20870 PF13411 MerR HTH family regulatory protein VARPA_RS20880 PF00106 short chain dehydrogenase VARPA_RS20885 PF00072 Response regulator receiver domain VARPA_RS20885 PF01339 CheB methylesterase VARPA_RS20890 PF04262 Glutamate-cysteine ligase VARPA_RS20900 PF02230 Phospholipase/Carboxylesterase VARPA_RS20915 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS20915 PF07683 Cobalamin synthesis protein cobW C-terminal domain VARPA_RS20935 PF03466 LysR substrate binding domain VARPA_RS20935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS20940 PF07690 Major Facilitator Superfamily VARPA_RS20950 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS20975 PF05661 Protein of unknown function (DUF808) VARPA_RS20990 PF09905 DNA-binding protein VF530 VARPA_RS20995 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS21005 PF00849 RNA pseudouridylate synthase VARPA_RS21010 PF00582 Universal stress protein family VARPA_RS21025 PF10017 Histidine-specific methyltransferase, SAM-dependent VARPA_RS21030 PF12867 DinB superfamily VARPA_RS21030 PF03781 Sulfatase-modifying factor enzyme 1 VARPA_RS21035 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS21045 PF00565 Staphylococcal nuclease homologue VARPA_RS21055 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21055 PF00501 AMP-binding enzyme VARPA_RS21060 PF02566 OsmC-like protein VARPA_RS21065 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS21090 PF07690 Major Facilitator Superfamily VARPA_RS21100 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS21105 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21110 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21115 PF00005 ABC transporter VARPA_RS21135 PF03009 Glycerophosphoryl diester phosphodiesterase family VARPA_RS21155 PF07731 Multicopper oxidase VARPA_RS21155 PF07732 Multicopper oxidase VARPA_RS21155 PF00394 Multicopper oxidase VARPA_RS21175 PF01266 FAD dependent oxidoreductase VARPA_RS21180 PF03576 Peptidase family S58 VARPA_RS21200 PF13411 MerR HTH family regulatory protein VARPA_RS21210 PF00005 ABC transporter VARPA_RS21210 PF12848 ABC transporter VARPA_RS21215 PF00271 Helicase conserved C-terminal domain VARPA_RS21215 PF00270 DEAD/DEAH box helicase VARPA_RS21225 PF03459 TOBE domain VARPA_RS21225 PF17912 MalK OB fold domain VARPA_RS21225 PF00005 ABC transporter VARPA_RS21230 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21235 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21245 PF07729 FCD domain VARPA_RS21245 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS21250 PF00920 Dehydratase family VARPA_RS21255 PF05035 2-keto-3-deoxy-galactonokinase VARPA_RS21260 PF01081 KDPG and KHG aldolase VARPA_RS21265 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS21295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS21295 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS21295 PF07689 KaiB domain VARPA_RS21300 PF12697 Alpha/beta hydrolase family VARPA_RS21305 PF13416 Bacterial extracellular solute-binding protein VARPA_RS21315 PF00005 ABC transporter VARPA_RS21315 PF08402 TOBE domain VARPA_RS21325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS21340 PF01081 KDPG and KHG aldolase VARPA_RS21345 PF00920 Dehydratase family VARPA_RS21370 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS21370 PF12804 MobA-like NTP transferase domain VARPA_RS21375 PF01243 Pyridoxamine 5'-phosphate oxidase VARPA_RS21375 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VARPA_RS21380 PF13505 Outer membrane protein beta-barrel domain VARPA_RS21380 PF00691 OmpA family VARPA_RS21395 PF00593 TonB dependent receptor VARPA_RS21395 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS21405 PF01625 Peptide methionine sulfoxide reductase VARPA_RS21410 PF17922 Tetracyclin repressor-like, C-terminal domain VARPA_RS21410 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS21420 PF00581 Rhodanese-like domain VARPA_RS21435 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VARPA_RS21435 PF00534 Glycosyl transferases group 1 VARPA_RS21440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VARPA_RS21440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VARPA_RS21440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VARPA_RS21440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VARPA_RS21445 PF02805 Metal binding domain of Ada VARPA_RS21445 PF12833 Helix-turn-helix domain VARPA_RS21450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VARPA_RS21450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VARPA_RS21455 PF00892 EamA-like transporter family VARPA_RS21470 PF00501 AMP-binding enzyme VARPA_RS21470 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21475 PF03466 LysR substrate binding domain VARPA_RS21475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS21485 PF02913 FAD linked oxidases, C-terminal domain VARPA_RS21485 PF01565 FAD binding domain VARPA_RS21490 PF07690 Major Facilitator Superfamily VARPA_RS21500 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS21505 PF01804 Penicillin amidase VARPA_RS21515 PF02321 Outer membrane efflux protein VARPA_RS21520 PF00005 ABC transporter VARPA_RS21520 PF02687 FtsX-like permease family VARPA_RS21520 PF12704 MacB-like periplasmic core domain VARPA_RS21525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS21530 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) VARPA_RS21535 PF00005 ABC transporter VARPA_RS21535 PF00664 ABC transporter transmembrane region VARPA_RS21545 PF00551 Formyl transferase VARPA_RS21550 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS21550 PF00593 TonB dependent receptor VARPA_RS21555 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21555 PF00501 AMP-binding enzyme VARPA_RS21555 PF00550 Phosphopantetheine attachment site VARPA_RS21555 PF00668 Condensation domain VARPA_RS21555 PF00975 Thioesterase domain VARPA_RS21560 PF00550 Phosphopantetheine attachment site VARPA_RS21560 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21560 PF00975 Thioesterase domain VARPA_RS21560 PF00501 AMP-binding enzyme VARPA_RS21560 PF00668 Condensation domain VARPA_RS21565 PF00698 Acyl transferase domain VARPA_RS21565 PF00668 Condensation domain VARPA_RS21565 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS21565 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS21565 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS21565 PF00550 Phosphopantetheine attachment site VARPA_RS21570 PF00501 AMP-binding enzyme VARPA_RS21570 PF00550 Phosphopantetheine attachment site VARPA_RS21570 PF00668 Condensation domain VARPA_RS21570 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21575 PF00975 Thioesterase domain VARPA_RS21580 PF03621 MbtH-like protein VARPA_RS21595 PF01648 4'-phosphopantetheinyl transferase superfamily VARPA_RS21610 PF00149 Calcineurin-like phosphoesterase VARPA_RS21615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS21615 PF03466 LysR substrate binding domain VARPA_RS21620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS21620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS21625 PF00171 Aldehyde dehydrogenase family VARPA_RS21630 PF01425 Amidase VARPA_RS21635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS21640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS21640 PF00005 ABC transporter VARPA_RS21645 PF00005 ABC transporter VARPA_RS21645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS21650 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21650 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS21655 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21660 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS21665 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS21670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS21670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS21670 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS21675 PF00501 AMP-binding enzyme VARPA_RS21675 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS21680 PF03466 LysR substrate binding domain VARPA_RS21680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS21700 PF00749 tRNA synthetases class I (E and Q), catalytic domain VARPA_RS21705 PF01053 Cys/Met metabolism PLP-dependent enzyme VARPA_RS21710 PF00156 Phosphoribosyl transferase domain VARPA_RS21725 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS21725 PF08245 Mur ligase middle domain VARPA_RS21730 PF03960 ArsC family VARPA_RS21740 PF06865 Pyrimidine/purine nucleoside phosphorylase VARPA_RS21745 PF00764 Arginosuccinate synthase VARPA_RS21755 PF01565 FAD binding domain VARPA_RS21755 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VARPA_RS21760 PF04461 Protein of unknown function (DUF520) VARPA_RS21770 PF01042 Endoribonuclease L-PSP VARPA_RS21775 PF02660 Glycerol-3-phosphate acyltransferase VARPA_RS21780 PF04073 Aminoacyl-tRNA editing domain VARPA_RS21785 PF00248 Aldo/keto reductase family VARPA_RS21790 PF00561 alpha/beta hydrolase fold VARPA_RS21805 PF00296 Luciferase-like monooxygenase VARPA_RS21815 PF03180 NLPA lipoprotein VARPA_RS21820 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS21825 PF09383 NIL domain VARPA_RS21825 PF00005 ABC transporter VARPA_RS21830 PF03180 NLPA lipoprotein VARPA_RS21835 PF03462 PCRF domain VARPA_RS21835 PF00472 RF-1 domain VARPA_RS21840 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS21845 PF11940 Domain of unknown function (DUF3458) Ig-like fold VARPA_RS21845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VARPA_RS21845 PF01433 Peptidase family M1 domain VARPA_RS21850 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VARPA_RS21870 PF07690 Major Facilitator Superfamily VARPA_RS21875 PF01515 Phosphate acetyl/butaryl transferase VARPA_RS21915 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS21915 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS21965 PF04976 DMSO reductase anchor subunit (DmsC) VARPA_RS21970 PF13247 4Fe-4S dicluster domain VARPA_RS21970 PF12800 4Fe-4S binding domain VARPA_RS21975 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS21975 PF00384 Molybdopterin oxidoreductase VARPA_RS21975 PF01568 Molydopterin dinucleotide binding domain VARPA_RS21980 PF03466 LysR substrate binding domain VARPA_RS21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS21985 PF00871 Acetokinase family VARPA_RS21990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS21990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS21990 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS21995 PF01614 Bacterial transcriptional regulator VARPA_RS21995 PF09339 IclR helix-turn-helix domain VARPA_RS22000 PF08406 CbbQ/NirQ/NorQ C-terminal VARPA_RS22000 PF07728 AAA domain (dynein-related subfamily) VARPA_RS22000 PF12556 Cobaltochelatase CobS subunit N terminal VARPA_RS22005 PF11775 Cobalamin biosynthesis protein CobT VWA domain VARPA_RS22005 PF06213 Cobalamin biosynthesis protein CobT VARPA_RS22015 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS22020 PF00171 Aldehyde dehydrogenase family VARPA_RS22025 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS22025 PF00501 AMP-binding enzyme VARPA_RS22065 PF01555 DNA methylase VARPA_RS22070 PF09339 IclR helix-turn-helix domain VARPA_RS22070 PF01614 Bacterial transcriptional regulator VARPA_RS22075 PF05199 GMC oxidoreductase VARPA_RS22075 PF00732 GMC oxidoreductase VARPA_RS22080 PF00083 Sugar (and other) transporter VARPA_RS22105 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VARPA_RS22120 PF03466 LysR substrate binding domain VARPA_RS22120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22125 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS22130 PF00005 ABC transporter VARPA_RS22135 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VARPA_RS22145 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS22145 PF00155 Aminotransferase class I and II VARPA_RS22155 PF01266 FAD dependent oxidoreductase VARPA_RS22160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS22170 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS22170 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS22175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS22175 PF00005 ABC transporter VARPA_RS22180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS22180 PF00005 ABC transporter VARPA_RS22185 PF01979 Amidohydrolase family VARPA_RS22190 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS22190 PF07683 Cobalamin synthesis protein cobW C-terminal domain VARPA_RS22245 PF13091 PLD-like domain VARPA_RS22250 PF01541 GIY-YIG catalytic domain VARPA_RS22280 PF00709 Adenylosuccinate synthetase VARPA_RS22285 PF00309 Sigma-54 factor, Activator interacting domain (AID) VARPA_RS22285 PF04963 Sigma-54 factor, core binding domain VARPA_RS22285 PF04552 Sigma-54, DNA binding domain VARPA_RS22295 PF00571 CBS domain VARPA_RS22295 PF01595 Cyclin M transmembrane N-terminal domain VARPA_RS22295 PF03471 Transporter associated domain VARPA_RS22300 PF00149 Calcineurin-like phosphoesterase VARPA_RS22305 PF01546 Peptidase family M20/M25/M40 VARPA_RS22310 PF13302 Acetyltransferase (GNAT) domain VARPA_RS22315 PF00155 Aminotransferase class I and II VARPA_RS22315 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS22320 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS22320 PF00072 Response regulator receiver domain VARPA_RS22335 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS22340 PF00296 Luciferase-like monooxygenase VARPA_RS22350 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS22350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS22350 PF08028 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS22355 PF09084 NMT1/THI5 like VARPA_RS22360 PF05995 Cysteine dioxygenase type I VARPA_RS22370 PF00271 Helicase conserved C-terminal domain VARPA_RS22370 PF00270 DEAD/DEAH box helicase VARPA_RS22375 PF04228 Putative neutral zinc metallopeptidase VARPA_RS22380 PF00692 dUTPase VARPA_RS22385 PF01979 Amidohydrolase family VARPA_RS22390 PF02608 ABC transporter substrate-binding protein PnrA-like VARPA_RS22395 PF00106 short chain dehydrogenase VARPA_RS22400 PF01965 DJ-1/PfpI family VARPA_RS22405 PF07690 Major Facilitator Superfamily VARPA_RS22410 PF01804 Penicillin amidase VARPA_RS22415 PF02311 AraC-like ligand binding domain VARPA_RS22415 PF12833 Helix-turn-helix domain VARPA_RS22420 PF03466 LysR substrate binding domain VARPA_RS22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22425 PF07690 Major Facilitator Superfamily VARPA_RS22430 PF00962 Adenosine/AMP deaminase VARPA_RS22435 PF01965 DJ-1/PfpI family VARPA_RS22440 PF01965 DJ-1/PfpI family VARPA_RS22450 PF04909 Amidohydrolase VARPA_RS22455 PF02515 CoA-transferase family III VARPA_RS22460 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS22465 PF03328 HpcH/HpaI aldolase/citrate lyase family VARPA_RS22470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22470 PF03466 LysR substrate binding domain VARPA_RS22475 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS22475 PF00563 EAL domain VARPA_RS22475 PF03707 Bacterial signalling protein N terminal repeat VARPA_RS22480 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VARPA_RS22480 PF00437 Type II/IV secretion system protein VARPA_RS22485 PF00990 Diguanylate cyclase, GGDEF domain VARPA_RS22485 PF08495 FIST N domain VARPA_RS22485 PF00563 EAL domain VARPA_RS22485 PF10442 FIST C domain VARPA_RS22495 PF02608 ABC transporter substrate-binding protein PnrA-like VARPA_RS22505 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS22510 PF00005 ABC transporter VARPA_RS22515 PF00860 Permease family VARPA_RS22520 PF03466 LysR substrate binding domain VARPA_RS22520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS22525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VARPA_RS22530 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS22530 PF01799 [2Fe-2S] binding domain VARPA_RS22535 PF07690 Major Facilitator Superfamily VARPA_RS22545 PF03621 MbtH-like protein VARPA_RS22550 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase VARPA_RS22555 PF00975 Thioesterase domain VARPA_RS22555 PF00550 Phosphopantetheine attachment site VARPA_RS22555 PF00501 AMP-binding enzyme VARPA_RS22555 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS22555 PF00668 Condensation domain VARPA_RS22560 PF03466 LysR substrate binding domain VARPA_RS22560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22565 PF07995 Glucose / Sorbosone dehydrogenase VARPA_RS22595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS22605 PF01451 Low molecular weight phosphotyrosine protein phosphatase VARPA_RS22615 PF00689 Cation transporting ATPase, C-terminus VARPA_RS22615 PF00690 Cation transporter/ATPase, N-terminus VARPA_RS22620 PF02308 MgtC family VARPA_RS22625 PF00171 Aldehyde dehydrogenase family VARPA_RS22630 PF05161 MOFRL family VARPA_RS22630 PF13660 Domain of unknown function (DUF4147) VARPA_RS22650 PF00576 HIUase/Transthyretin family VARPA_RS22655 PF07729 FCD domain VARPA_RS22655 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS22665 PF01546 Peptidase family M20/M25/M40 VARPA_RS22665 PF07687 Peptidase dimerisation domain VARPA_RS22670 PF07687 Peptidase dimerisation domain VARPA_RS22670 PF01546 Peptidase family M20/M25/M40 VARPA_RS22700 PF04185 Phosphoesterase family VARPA_RS22755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VARPA_RS22760 PF01177 Asp/Glu/Hydantoin racemase VARPA_RS22770 PF00860 Permease family VARPA_RS22775 PF00248 Aldo/keto reductase family VARPA_RS22785 PF00375 Sodium:dicarboxylate symporter family VARPA_RS22795 PF01594 AI-2E family transporter VARPA_RS22810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS22810 PF03466 LysR substrate binding domain VARPA_RS22815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS22815 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS22815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS22820 PF01261 Xylose isomerase-like TIM barrel VARPA_RS22825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS22825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS22830 PF04820 Tryptophan halogenase VARPA_RS22835 PF00390 Malic enzyme, N-terminal domain VARPA_RS22835 PF03949 Malic enzyme, NAD binding domain VARPA_RS22835 PF01515 Phosphate acetyl/butaryl transferase VARPA_RS22850 PF01527 Transposase VARPA_RS22850 PF13276 HTH-like domain VARPA_RS22850 PF00665 Integrase core domain VARPA_RS22875 PF13296 Putative type VI secretion system Rhs element Vgr VARPA_RS22875 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS22875 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) VARPA_RS22885 PF00005 ABC transporter VARPA_RS22890 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS22905 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS22910 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS22910 PF00072 Response regulator receiver domain VARPA_RS22930 PF01638 HxlR-like helix-turn-helix VARPA_RS22940 PF01037 Lrp/AsnC ligand binding domain VARPA_RS22945 PF01266 FAD dependent oxidoreductase VARPA_RS22950 PF00355 Rieske [2Fe-2S] domain VARPA_RS22960 PF14437 MafB19-like deaminase VARPA_RS22965 PF01774 UreD urease accessory protein VARPA_RS22990 PF08753 NikR C terminal nickel binding domain VARPA_RS22990 PF01402 Ribbon-helix-helix protein, copG family VARPA_RS23000 PF03466 LysR substrate binding domain VARPA_RS23000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23015 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS23020 PF01053 Cys/Met metabolism PLP-dependent enzyme VARPA_RS23035 PF01546 Peptidase family M20/M25/M40 VARPA_RS23035 PF07687 Peptidase dimerisation domain VARPA_RS23040 PF13333 Integrase core domain VARPA_RS23040 PF00665 Integrase core domain VARPA_RS23040 PF13276 HTH-like domain VARPA_RS23045 PF01527 Transposase VARPA_RS23050 PF04328 Selenoprotein, putative VARPA_RS23055 PF02554 Carbon starvation protein CstA VARPA_RS23055 PF13722 5TM C-terminal transporter carbon starvation CstA VARPA_RS23060 PF00793 DAHP synthetase I family VARPA_RS23065 PF00877 NlpC/P60 family VARPA_RS23075 PF12833 Helix-turn-helix domain VARPA_RS23075 PF14525 AraC-binding-like domain VARPA_RS23095 PF12852 Cupin VARPA_RS23095 PF12833 Helix-turn-helix domain VARPA_RS23100 PF00106 short chain dehydrogenase VARPA_RS23110 PF03466 LysR substrate binding domain VARPA_RS23110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23120 PF08450 SMP-30/Gluconolactonase/LRE-like region VARPA_RS23135 PF00141 Peroxidase VARPA_RS23140 PF00072 Response regulator receiver domain VARPA_RS23140 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS23145 PF17200 Single Cache domain 2 VARPA_RS23145 PF07730 Histidine kinase VARPA_RS23155 PF07690 Major Facilitator Superfamily VARPA_RS23165 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS23165 PF00672 HAMP domain VARPA_RS23165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS23170 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS23170 PF00072 Response regulator receiver domain VARPA_RS23175 PF00873 AcrB/AcrD/AcrF family VARPA_RS23180 PF13533 Biotin-lipoyl like VARPA_RS23185 PF02321 Outer membrane efflux protein VARPA_RS23190 PF00248 Aldo/keto reductase family VARPA_RS23195 PF07690 Major Facilitator Superfamily VARPA_RS23200 PF00005 ABC transporter VARPA_RS23205 PF00005 ABC transporter VARPA_RS23205 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS23210 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS23215 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS23230 PF00202 Aminotransferase class-III VARPA_RS23235 PF03466 LysR substrate binding domain VARPA_RS23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23245 PF03976 Polyphosphate kinase 2 (PPK2) VARPA_RS23250 PF01384 Phosphate transporter family VARPA_RS23260 PF02811 PHP domain VARPA_RS23270 PF01300 Telomere recombination VARPA_RS23275 PF02163 Peptidase family M50 VARPA_RS23280 PF00579 tRNA synthetases class I (W and Y) VARPA_RS23285 PF00072 Response regulator receiver domain VARPA_RS23285 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS23290 PF18698 Histidine kinase sensor domain VARPA_RS23290 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS23290 PF00672 HAMP domain VARPA_RS23290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS23300 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV VARPA_RS23305 PF00072 Response regulator receiver domain VARPA_RS23305 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS23315 PF06082 Exopolysaccharide biosynthesis protein YbjH VARPA_RS23320 PF02719 Polysaccharide biosynthesis protein VARPA_RS23325 PF13807 G-rich domain on putative tyrosine kinase VARPA_RS23325 PF13614 AAA domain VARPA_RS23325 PF02706 Chain length determinant protein VARPA_RS23330 PF01451 Low molecular weight phosphotyrosine protein phosphatase VARPA_RS23345 PF02397 Bacterial sugar transferase VARPA_RS23355 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VARPA_RS23360 PF00132 Bacterial transferase hexapeptide (six repeats) VARPA_RS23365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VARPA_RS23365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VARPA_RS23370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VARPA_RS23370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VARPA_RS23370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VARPA_RS23375 PF02563 Polysaccharide biosynthesis/export protein VARPA_RS23375 PF10531 SLBB domain VARPA_RS23390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VARPA_RS23390 PF02403 Seryl-tRNA synthetase N-terminal domain VARPA_RS23395 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS23395 PF13291 ACT domain VARPA_RS23400 PF02401 LytB protein VARPA_RS23405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS23410 PF04002 RadC-like JAB domain VARPA_RS23415 PF01713 Smr domain VARPA_RS23420 PF14759 Reductase C-terminal VARPA_RS23420 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS23430 PF07055 Enoyl reductase FAD binding domain VARPA_RS23430 PF12241 Trans-2-enoyl-CoA reductase catalytic region VARPA_RS23430 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VARPA_RS23435 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS23440 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23445 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23450 PF00005 ABC transporter VARPA_RS23460 PF06719 AraC-type transcriptional regulator N-terminus VARPA_RS23460 PF12833 Helix-turn-helix domain VARPA_RS23465 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS23465 PF10518 TAT (twin-arginine translocation) pathway signal sequence VARPA_RS23465 PF01799 [2Fe-2S] binding domain VARPA_RS23470 PF00941 FAD binding domain in molybdopterin dehydrogenase VARPA_RS23470 PF03450 CO dehydrogenase flavoprotein C-terminal domain VARPA_RS23475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain VARPA_RS23475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase VARPA_RS23480 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS23485 PF07690 Major Facilitator Superfamily VARPA_RS23485 PF00083 Sugar (and other) transporter VARPA_RS23490 PF06481 COX Aromatic Rich Motif VARPA_RS23490 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VARPA_RS23495 PF00115 Cytochrome C and Quinol oxidase polypeptide I VARPA_RS23500 PF00510 Cytochrome c oxidase subunit III VARPA_RS23505 PF03626 Prokaryotic Cytochrome C oxidase subunit IV VARPA_RS23515 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS23515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS23520 PF00072 Response regulator receiver domain VARPA_RS23525 PF03006 Haemolysin-III related VARPA_RS23530 PF04102 SlyX VARPA_RS23535 PF07690 Major Facilitator Superfamily VARPA_RS23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23540 PF03466 LysR substrate binding domain VARPA_RS23565 PF02769 AIR synthase related protein, C-terminal domain VARPA_RS23565 PF00586 AIR synthase related protein, N-terminal domain VARPA_RS23575 PF00005 ABC transporter VARPA_RS23580 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23585 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23590 PF00581 Rhodanese-like domain VARPA_RS23595 PF02634 FdhD/NarQ family VARPA_RS23605 PF00384 Molybdopterin oxidoreductase VARPA_RS23615 PF00005 ABC transporter VARPA_RS23615 PF03459 TOBE domain VARPA_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23635 PF03459 TOBE domain VARPA_RS23640 PF07690 Major Facilitator Superfamily VARPA_RS23645 PF03466 LysR substrate binding domain VARPA_RS23645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS23650 PF10609 NUBPL iron-transfer P-loop NTPase VARPA_RS23665 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS23670 PF01546 Peptidase family M20/M25/M40 VARPA_RS23670 PF07687 Peptidase dimerisation domain VARPA_RS23675 PF01037 Lrp/AsnC ligand binding domain VARPA_RS23690 PF04337 Protein of unknown function, DUF480 VARPA_RS23695 PF09992 Phosphodiester glycosidase VARPA_RS23700 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS23700 PF18324 Hypothetical protein TT1725 VARPA_RS23705 PF09334 tRNA synthetases class I (M) VARPA_RS23705 PF01588 Putative tRNA binding domain VARPA_RS23715 PF00916 Sulfate permease family VARPA_RS23715 PF01740 STAS domain VARPA_RS23730 PF02616 Segregation and condensation protein ScpA VARPA_RS23735 PF00890 FAD binding domain VARPA_RS23735 PF02910 Fumarate reductase flavoprotein C-term VARPA_RS23740 PF02548 Ketopantoate hydroxymethyltransferase VARPA_RS23745 PF02569 Pantoate-beta-alanine ligase VARPA_RS23760 PF02445 Quinolinate synthetase A protein VARPA_RS23765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VARPA_RS23765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VARPA_RS23770 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VARPA_RS23770 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VARPA_RS23775 PF02556 Preprotein translocase subunit SecB VARPA_RS23780 PF00462 Glutaredoxin VARPA_RS23785 PF00581 Rhodanese-like domain VARPA_RS23790 PF00300 Histidine phosphatase superfamily (branch 1) VARPA_RS23795 PF03572 Peptidase family S41 VARPA_RS23795 PF13180 PDZ domain VARPA_RS23800 PF00899 ThiF family VARPA_RS23805 PF05170 AsmA family VARPA_RS23815 PF00072 Response regulator receiver domain VARPA_RS23815 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS23820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS23820 PF07730 Histidine kinase VARPA_RS23820 PF05231 MASE1 VARPA_RS23850 PF04972 BON domain VARPA_RS23855 PF05532 CsbD-like VARPA_RS23865 PF00893 Small Multidrug Resistance protein VARPA_RS23875 PF01227 GTP cyclohydrolase I VARPA_RS23885 PF00293 NUDIX domain VARPA_RS23900 PF01336 OB-fold nucleic acid binding domain VARPA_RS23900 PF02938 GAD domain VARPA_RS23900 PF00152 tRNA synthetases class II (D, K and N) VARPA_RS23915 PF00474 Sodium:solute symporter family VARPA_RS23920 PF03109 ABC1 family VARPA_RS23935 PF01209 ubiE/COQ5 methyltransferase family VARPA_RS23960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VARPA_RS23960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS23965 PF13416 Bacterial extracellular solute-binding protein VARPA_RS23970 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23975 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS23980 PF17912 MalK OB fold domain VARPA_RS23980 PF00005 ABC transporter VARPA_RS23985 PF03009 Glycerophosphoryl diester phosphodiesterase family VARPA_RS23990 PF00924 Mechanosensitive ion channel VARPA_RS23990 PF12794 Mechanosensitive ion channel inner membrane domain 1 VARPA_RS23990 PF12795 Mechanosensitive ion channel porin domain VARPA_RS23995 PF01037 Lrp/AsnC ligand binding domain VARPA_RS24005 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS24010 PF00005 ABC transporter VARPA_RS24025 PF01488 Shikimate / quinate 5-dehydrogenase VARPA_RS24025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VARPA_RS24025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VARPA_RS24030 PF00472 RF-1 domain VARPA_RS24030 PF03462 PCRF domain VARPA_RS24035 PF17827 PrmC N-terminal domain VARPA_RS24035 PF05175 Methyltransferase small domain VARPA_RS24040 PF00462 Glutaredoxin VARPA_RS24050 PF00571 CBS domain VARPA_RS24050 PF03471 Transporter associated domain VARPA_RS24050 PF01595 Cyclin M transmembrane N-terminal domain VARPA_RS24055 PF01464 Transglycosylase SLT domain VARPA_RS24055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VARPA_RS24060 PF03129 Anticodon binding domain VARPA_RS24060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VARPA_RS24060 PF04073 Aminoacyl-tRNA editing domain VARPA_RS24065 PF00293 NUDIX domain VARPA_RS24075 PF00696 Amino acid kinase family VARPA_RS24075 PF01472 PUA domain VARPA_RS24080 PF01926 50S ribosome-binding GTPase VARPA_RS24080 PF01018 GTP1/OBG VARPA_RS24085 PF01016 Ribosomal L27 protein VARPA_RS24090 PF00829 Ribosomal prokaryotic L21 protein VARPA_RS24095 PF00348 Polyprenyl synthetase VARPA_RS24105 PF00437 Type II/IV secretion system protein VARPA_RS24105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VARPA_RS24110 PF00482 Type II secretion system (T2SS), protein F VARPA_RS24115 PF01478 Type IV leader peptidase family VARPA_RS24115 PF06750 Bacterial Peptidase A24 N-terminal domain VARPA_RS24120 PF01121 Dephospho-CoA kinase VARPA_RS24125 PF03062 MBOAT, membrane-bound O-acyltransferase family VARPA_RS24135 PF07072 Cell division protein VARPA_RS24140 PF03884 DNA gyrase inhibitor YacG VARPA_RS24145 PF01757 Acyltransferase family VARPA_RS24150 PF00293 NUDIX domain VARPA_RS24160 PF01960 ArgJ family VARPA_RS24165 PF07517 SecA DEAD-like domain VARPA_RS24165 PF02810 SEC-C motif VARPA_RS24165 PF01043 SecA preprotein cross-linking domain VARPA_RS24165 PF07516 SecA Wing and Scaffold domain VARPA_RS24175 PF02423 Ornithine cyclodeaminase/mu-crystallin family VARPA_RS24180 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS24185 PF08348 YheO-like PAS domain VARPA_RS24185 PF13309 HTH domain VARPA_RS24190 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS24195 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS24200 PF03466 LysR substrate binding domain VARPA_RS24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24210 PF00072 Response regulator receiver domain VARPA_RS24215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS24215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VARPA_RS24215 PF00072 Response regulator receiver domain VARPA_RS24215 PF01627 Hpt domain VARPA_RS24215 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS24215 PF00672 HAMP domain VARPA_RS24220 PF00547 Urease, gamma subunit VARPA_RS24230 PF00699 Urease beta subunit VARPA_RS24235 PF00449 Urease alpha-subunit, N-terminal domain VARPA_RS24235 PF01979 Amidohydrolase family VARPA_RS24250 PF05194 UreE urease accessory protein, C-terminal domain VARPA_RS24250 PF02814 UreE urease accessory protein, N-terminal domain VARPA_RS24255 PF01730 UreF VARPA_RS24260 PF02492 CobW/HypB/UreG, nucleotide-binding domain VARPA_RS24275 PF13609 Gram-negative porin VARPA_RS24285 PF01103 Surface antigen VARPA_RS24285 PF07244 Surface antigen variable number repeat VARPA_RS24290 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS24290 PF00072 Response regulator receiver domain VARPA_RS24305 PF00672 HAMP domain VARPA_RS24305 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS24305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS24310 PF00072 Response regulator receiver domain VARPA_RS24310 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS24315 PF12805 FUSC-like inner membrane protein yccS VARPA_RS24325 PF01027 Inhibitor of apoptosis-promoting Bax1 VARPA_RS24330 PF02082 Transcriptional regulator VARPA_RS24335 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS24335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS24340 PF00873 AcrB/AcrD/AcrF family VARPA_RS24355 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS24360 PF00694 Aconitase C-terminal domain VARPA_RS24365 PF00330 Aconitase family (aconitate hydratase) VARPA_RS24370 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS24375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24375 PF03466 LysR substrate binding domain VARPA_RS24390 PF03466 LysR substrate binding domain VARPA_RS24390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24395 PF00881 Nitroreductase family VARPA_RS24400 PF00793 DAHP synthetase I family VARPA_RS24410 PF00557 Metallopeptidase family M24 VARPA_RS24430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VARPA_RS24430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VARPA_RS24435 PF02447 GntP family permease VARPA_RS24440 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VARPA_RS24440 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS24445 PF01738 Dienelactone hydrolase family VARPA_RS24450 PF01613 Flavin reductase like domain VARPA_RS24465 PF14525 AraC-binding-like domain VARPA_RS24465 PF12833 Helix-turn-helix domain VARPA_RS24470 PF03741 Integral membrane protein TerC family VARPA_RS24500 PF05567 Neisseria PilC beta-propeller domain VARPA_RS24520 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS24520 PF00114 Pilin (bacterial filament) VARPA_RS24525 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS24525 PF00114 Pilin (bacterial filament) VARPA_RS24530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24530 PF03466 LysR substrate binding domain VARPA_RS24535 PF01047 MarR family VARPA_RS24540 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS24555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24555 PF03466 LysR substrate binding domain VARPA_RS24560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS24560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS24560 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS24595 PF00437 Type II/IV secretion system protein VARPA_RS24600 PF11741 AMIN domain VARPA_RS24600 PF00263 Bacterial type II and III secretion system protein VARPA_RS24600 PF03958 Bacterial type II/III secretion system short domain VARPA_RS24600 PF07660 Secretin and TonB N terminus short domain VARPA_RS24635 PF12833 Helix-turn-helix domain VARPA_RS24635 PF02311 AraC-like ligand binding domain VARPA_RS24645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24645 PF03466 LysR substrate binding domain VARPA_RS24655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24655 PF03466 LysR substrate binding domain VARPA_RS24660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24660 PF03466 LysR substrate binding domain VARPA_RS24670 PF01047 MarR family VARPA_RS24675 PF12951 Passenger-associated-transport-repeat VARPA_RS24685 PF00072 Response regulator receiver domain VARPA_RS24685 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS24690 PF00149 Calcineurin-like phosphoesterase VARPA_RS24695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS24695 PF03466 LysR substrate binding domain VARPA_RS24700 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS24705 PF01425 Amidase VARPA_RS24710 PF03449 Transcription elongation factor, N-terminal VARPA_RS24710 PF01272 Transcription elongation factor, GreA/GreB, C-term VARPA_RS24725 PF06969 HemN C-terminal domain VARPA_RS24725 PF04055 Radical SAM superfamily VARPA_RS24730 PF01725 Ham1 family VARPA_RS24735 PF03725 3' exoribonuclease family, domain 2 VARPA_RS24735 PF01138 3' exoribonuclease family, domain 1 VARPA_RS24745 PF03793 PASTA domain VARPA_RS24745 PF00069 Protein kinase domain VARPA_RS24750 PF03755 YicC-like family, N-terminal region VARPA_RS24750 PF08340 Domain of unknown function (DUF1732) VARPA_RS24755 PF00625 Guanylate kinase VARPA_RS24760 PF01192 RNA polymerase Rpb6 VARPA_RS24765 PF13291 ACT domain VARPA_RS24765 PF04607 Region found in RelA / SpoT proteins VARPA_RS24765 PF02824 TGS domain VARPA_RS24770 PF03449 Transcription elongation factor, N-terminal VARPA_RS24770 PF01272 Transcription elongation factor, GreA/GreB, C-term VARPA_RS24785 PF03741 Integral membrane protein TerC family VARPA_RS24805 PF01177 Asp/Glu/Hydantoin racemase VARPA_RS24810 PF01312 FlhB HrpN YscU SpaS Family VARPA_RS24815 PF01311 Bacterial export proteins, family 1 VARPA_RS24825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VARPA_RS24825 PF18269 T3SS EscN ATPase C-terminal domain VARPA_RS24825 PF02874 ATP synthase alpha/beta family, beta-barrel domain VARPA_RS24840 PF01514 Secretory protein of YscJ/FliF family VARPA_RS24855 PF03958 Bacterial type II/III secretion system short domain VARPA_RS24855 PF00263 Bacterial type II and III secretion system protein VARPA_RS24860 PF01313 Bacterial export proteins, family 3 VARPA_RS24865 PF00771 FHIPEP family VARPA_RS24875 PF00813 FliP family VARPA_RS24895 PF01628 HrcA protein C terminal domain VARPA_RS24895 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding VARPA_RS24900 PF01513 ATP-NAD kinase VARPA_RS24905 PF02463 RecF/RecN/SMC N terminal domain VARPA_RS24910 PF03668 P-loop ATPase protein family VARPA_RS24915 PF00730 HhH-GPD superfamily base excision DNA repair protein VARPA_RS24915 PF00633 Helix-hairpin-helix motif VARPA_RS24915 PF14815 NUDIX domain VARPA_RS24920 PF00350 Dynamin family VARPA_RS24925 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VARPA_RS24925 PF06827 Zinc finger found in FPG and IleRS VARPA_RS24925 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VARPA_RS24940 PF08544 GHMP kinases C terminal VARPA_RS24940 PF00288 GHMP kinases N terminal domain VARPA_RS24950 PF14572 Phosphoribosyl synthetase-associated domain VARPA_RS24950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VARPA_RS24955 PF01386 Ribosomal L25p family VARPA_RS24955 PF14693 Ribosomal protein TL5, C-terminal domain VARPA_RS24960 PF01195 Peptidyl-tRNA hydrolase VARPA_RS24970 PF00037 4Fe-4S binding domain VARPA_RS24975 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS24980 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS24980 PF12911 N-terminal TM domain of oligopeptide transport permease C VARPA_RS24985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS24985 PF00005 ABC transporter VARPA_RS24990 PF00005 ABC transporter VARPA_RS24990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS24995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS25000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS25005 PF01425 Amidase VARPA_RS25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25015 PF03466 LysR substrate binding domain VARPA_RS25030 PF00300 Histidine phosphatase superfamily (branch 1) VARPA_RS25040 PF12697 Alpha/beta hydrolase family VARPA_RS25045 PF01470 Pyroglutamyl peptidase VARPA_RS25050 PF03746 LamB/YcsF family VARPA_RS25055 PF02626 Carboxyltransferase domain, subdomain A and B VARPA_RS25060 PF02682 Carboxyltransferase domain, subdomain C and D VARPA_RS25065 PF01467 Cytidylyltransferase-like VARPA_RS25075 PF01810 LysE type translocator VARPA_RS25080 PF03466 LysR substrate binding domain VARPA_RS25080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25085 PF05193 Peptidase M16 inactive domain VARPA_RS25090 PF05193 Peptidase M16 inactive domain VARPA_RS25090 PF00675 Insulinase (Peptidase family M16) VARPA_RS25095 PF00448 SRP54-type protein, GTPase domain VARPA_RS25095 PF02881 SRP54-type protein, helical bundle domain VARPA_RS25100 PF00072 Response regulator receiver domain VARPA_RS25100 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS25100 PF09456 RcsC Alpha-Beta-Loop (ABL) VARPA_RS25100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS25115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VARPA_RS25125 PF13545 Crp-like helix-turn-helix domain VARPA_RS25125 PF00027 Cyclic nucleotide-binding domain VARPA_RS25145 PF13533 Biotin-lipoyl like VARPA_RS25150 PF00005 ABC transporter VARPA_RS25150 PF00664 ABC transporter transmembrane region VARPA_RS25155 PF02321 Outer membrane efflux protein VARPA_RS25165 PF04542 Sigma-70 region 2 VARPA_RS25165 PF04545 Sigma-70, region 4 VARPA_RS25165 PF00140 Sigma-70 factor, region 1.2 VARPA_RS25170 PF08713 DNA alkylation repair enzyme VARPA_RS25175 PF02630 SCO1/SenC VARPA_RS25180 PF01040 UbiA prenyltransferase family VARPA_RS25205 PF00510 Cytochrome c oxidase subunit III VARPA_RS25215 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VARPA_RS25220 PF00115 Cytochrome C and Quinol oxidase polypeptide I VARPA_RS25225 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VARPA_RS25225 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VARPA_RS25235 PF08241 Methyltransferase domain VARPA_RS25245 PF00588 SpoU rRNA Methylase family VARPA_RS25255 PF01575 MaoC like domain VARPA_RS25260 PF10609 NUBPL iron-transfer P-loop NTPase VARPA_RS25260 PF01883 Iron-sulfur cluster assembly protein VARPA_RS25265 PF02525 Flavodoxin-like fold VARPA_RS25270 PF00999 Sodium/hydrogen exchanger family VARPA_RS25270 PF02254 TrkA-N domain VARPA_RS25280 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS25285 PF00501 AMP-binding enzyme VARPA_RS25285 PF00550 Phosphopantetheine attachment site VARPA_RS25285 PF07993 Male sterility protein VARPA_RS25290 PF00106 short chain dehydrogenase VARPA_RS25295 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS25300 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS25300 PF12806 Acetyl-CoA dehydrogenase C-terminal like VARPA_RS25300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS25300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS25315 PF06983 3-demethylubiquinone-9 3-methyltransferase VARPA_RS25325 PF07690 Major Facilitator Superfamily VARPA_RS25330 PF07237 Protein of unknown function (DUF1428) VARPA_RS25340 PF04444 Catechol dioxygenase N terminus VARPA_RS25340 PF00775 Dioxygenase VARPA_RS25345 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS25400 PF00115 Cytochrome C and Quinol oxidase polypeptide I VARPA_RS25410 PF03466 LysR substrate binding domain VARPA_RS25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25425 PF00672 HAMP domain VARPA_RS25425 PF02743 Cache domain VARPA_RS25425 PF00211 Adenylate and Guanylate cyclase catalytic domain VARPA_RS25435 PF00465 Iron-containing alcohol dehydrogenase VARPA_RS25440 PF01494 FAD binding domain VARPA_RS25450 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS25460 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain VARPA_RS25460 PF01137 RNA 3'-terminal phosphate cyclase VARPA_RS25465 PF10127 RNA repair pathway DNA polymerase beta family VARPA_RS25480 PF01139 tRNA-splicing ligase RtcB VARPA_RS25490 PF06956 Regulator of RNA terminal phosphate cyclase VARPA_RS25490 PF00158 Sigma-54 interaction domain VARPA_RS25505 PF12146 Serine aminopeptidase, S33 VARPA_RS25530 PF03104 DNA polymerase family B, exonuclease domain VARPA_RS25530 PF00136 DNA polymerase family B VARPA_RS25535 PF04055 Radical SAM superfamily VARPA_RS25550 PF03797 Autotransporter beta-domain VARPA_RS25550 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS25550 PF16168 Adhesin of bacterial autotransporter system, probable stalk VARPA_RS25565 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS25565 PF00072 Response regulator receiver domain VARPA_RS25570 PF00072 Response regulator receiver domain VARPA_RS25570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS25570 PF01627 Hpt domain VARPA_RS25570 PF00672 HAMP domain VARPA_RS25570 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS25570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VARPA_RS25595 PF13276 HTH-like domain VARPA_RS25595 PF00665 Integrase core domain VARPA_RS25595 PF01527 Transposase VARPA_RS25600 PF01527 Transposase VARPA_RS25615 PF01527 Transposase VARPA_RS25620 PF00665 Integrase core domain VARPA_RS25620 PF13276 HTH-like domain VARPA_RS25620 PF13333 Integrase core domain VARPA_RS25650 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS25655 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS25660 PF02803 Thiolase, C-terminal domain VARPA_RS25660 PF00108 Thiolase, N-terminal domain VARPA_RS25665 PF01144 Coenzyme A transferase VARPA_RS25670 PF01144 Coenzyme A transferase VARPA_RS25675 PF01614 Bacterial transcriptional regulator VARPA_RS25675 PF09339 IclR helix-turn-helix domain VARPA_RS25680 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS25705 PF13629 Pilus formation protein N terminal region VARPA_RS25705 PF04972 BON domain VARPA_RS25705 PF00263 Bacterial type II and III secretion system protein VARPA_RS25715 PF00437 Type II/IV secretion system protein VARPA_RS25750 PF00072 Response regulator receiver domain VARPA_RS25750 PF00158 Sigma-54 interaction domain VARPA_RS25750 PF02954 Bacterial regulatory protein, Fis family VARPA_RS25760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS25760 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS25765 PF00005 ABC transporter VARPA_RS25765 PF03412 Peptidase C39 family VARPA_RS25765 PF00664 ABC transporter transmembrane region VARPA_RS25775 PF02875 Mur ligase family, glutamate ligase domain VARPA_RS25775 PF01225 Mur ligase family, catalytic domain VARPA_RS25775 PF08245 Mur ligase middle domain VARPA_RS25780 PF00691 OmpA family VARPA_RS25795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25795 PF03466 LysR substrate binding domain VARPA_RS25800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal VARPA_RS25800 PF00775 Dioxygenase VARPA_RS25810 PF00034 Cytochrome c VARPA_RS25815 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS25815 PF17862 AAA+ lid domain VARPA_RS25815 PF01434 Peptidase family M41 VARPA_RS25840 PF04357 TamB, inner membrane protein subunit of TAM complex VARPA_RS25855 PF02634 FdhD/NarQ family VARPA_RS25860 PF01568 Molydopterin dinucleotide binding domain VARPA_RS25860 PF00384 Molybdopterin oxidoreductase VARPA_RS25860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VARPA_RS25860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VARPA_RS25860 PF00037 4Fe-4S binding domain VARPA_RS25865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VARPA_RS25865 PF00037 4Fe-4S binding domain VARPA_RS25865 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region VARPA_RS25875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25875 PF03466 LysR substrate binding domain VARPA_RS25885 PF07690 Major Facilitator Superfamily VARPA_RS25890 PF03466 LysR substrate binding domain VARPA_RS25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS25895 PF02887 Pyruvate kinase, alpha/beta domain VARPA_RS25895 PF00224 Pyruvate kinase, barrel domain VARPA_RS25900 PF02558 Ketopantoate reductase PanE/ApbA VARPA_RS25900 PF08546 Ketopantoate reductase PanE/ApbA C terminal VARPA_RS25905 PF01557 Fumarylacetoacetate (FAA) hydrolase family VARPA_RS25910 PF02629 CoA binding domain VARPA_RS25910 PF00549 CoA-ligase VARPA_RS25915 PF00549 CoA-ligase VARPA_RS25915 PF08442 ATP-grasp domain VARPA_RS25920 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS25925 PF02515 CoA-transferase family III VARPA_RS25930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS25930 PF00989 PAS fold VARPA_RS25930 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS25935 PF02515 CoA-transferase family III VARPA_RS25940 PF00205 Thiamine pyrophosphate enzyme, central domain VARPA_RS25940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VARPA_RS25940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VARPA_RS25955 PF01970 Tripartite tricarboxylate transporter TctA family VARPA_RS25980 PF01381 Helix-turn-helix VARPA_RS26000 PF01638 HxlR-like helix-turn-helix VARPA_RS26015 PF01553 Acyltransferase VARPA_RS26020 PF01979 Amidohydrolase family VARPA_RS26025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VARPA_RS26025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VARPA_RS26030 PF00156 Phosphoribosyl transferase domain VARPA_RS26035 PF03652 Holliday junction resolvase VARPA_RS26040 PF02622 Uncharacterized ACR, COG1678 VARPA_RS26045 PF00875 DNA photolyase VARPA_RS26045 PF03441 FAD binding domain of DNA photolyase VARPA_RS26050 PF01627 Hpt domain VARPA_RS26050 PF00072 Response regulator receiver domain VARPA_RS26050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS26050 PF01584 CheW-like domain VARPA_RS26050 PF02895 Signal transducing histidine kinase, homodimeric domain VARPA_RS26055 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VARPA_RS26055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VARPA_RS26065 PF00072 Response regulator receiver domain VARPA_RS26070 PF00072 Response regulator receiver domain VARPA_RS26080 PF00202 Aminotransferase class-III VARPA_RS26090 PF02142 MGS-like domain VARPA_RS26090 PF01808 AICARFT/IMPCHase bienzyme VARPA_RS26095 PF02954 Bacterial regulatory protein, Fis family VARPA_RS26100 PF01207 Dihydrouridine synthase (Dus) VARPA_RS26105 PF09335 SNARE associated Golgi protein VARPA_RS26115 PF13180 PDZ domain VARPA_RS26130 PF01926 50S ribosome-binding GTPase VARPA_RS26130 PF06071 Protein of unknown function (DUF933) VARPA_RS26135 PF13407 Periplasmic binding protein domain VARPA_RS26140 PF00005 ABC transporter VARPA_RS26145 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS26150 PF00356 Bacterial regulatory proteins, lacI family VARPA_RS26155 PF00294 pfkB family carbohydrate kinase VARPA_RS26160 PF05025 RbsD / FucU transport protein family VARPA_RS26170 PF01494 FAD binding domain VARPA_RS26175 PF10411 Disulfide bond isomerase protein N-terminus VARPA_RS26175 PF13098 Thioredoxin-like domain VARPA_RS26190 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS26235 PF02630 SCO1/SenC VARPA_RS26245 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS26245 PF00501 AMP-binding enzyme VARPA_RS26255 PF00149 Calcineurin-like phosphoesterase VARPA_RS26270 PF02803 Thiolase, C-terminal domain VARPA_RS26270 PF00108 Thiolase, N-terminal domain VARPA_RS26275 PF00106 short chain dehydrogenase VARPA_RS26280 PF17874 MalT-like TPR region VARPA_RS26280 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS26295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS26295 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS26295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS26300 PF02515 CoA-transferase family III VARPA_RS26325 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS26325 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS26335 PF04116 Fatty acid hydroxylase superfamily VARPA_RS26355 PF05496 Holliday junction DNA helicase RuvB P-loop domain VARPA_RS26355 PF17864 RuvB AAA lid domain VARPA_RS26355 PF05491 RuvB C-terminal winged helix domain VARPA_RS26360 PF01066 CDP-alcohol phosphatidyltransferase VARPA_RS26365 PF12146 Serine aminopeptidase, S33 VARPA_RS26365 PF12147 Putative methyltransferase VARPA_RS26370 PF00782 Dual specificity phosphatase, catalytic domain VARPA_RS26400 PF07499 RuvA, C-terminal domain VARPA_RS26400 PF01330 RuvA N terminal domain VARPA_RS26405 PF02562 PhoH-like protein VARPA_RS26410 PF02130 Uncharacterized protein family UPF0054 VARPA_RS26415 PF02580 D-Tyr-tRNA(Tyr) deacylase VARPA_RS26420 PF16916 Dimerisation domain of Zinc Transporter VARPA_RS26420 PF01545 Cation efflux family VARPA_RS26435 PF00579 tRNA synthetases class I (W and Y) VARPA_RS26435 PF01479 S4 domain VARPA_RS26445 PF03702 Anhydro-N-acetylmuramic acid kinase VARPA_RS26450 PF07690 Major Facilitator Superfamily VARPA_RS26455 PF01521 Iron-sulphur cluster biosynthesis VARPA_RS26460 PF00380 Ribosomal protein S9/S16 VARPA_RS26465 PF00572 Ribosomal protein L13 VARPA_RS26475 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VARPA_RS26480 PF03330 Lytic transglycolase VARPA_RS26485 PF02219 Methylenetetrahydrofolate reductase VARPA_RS26490 PF01479 S4 domain VARPA_RS26490 PF01728 FtsJ-like methyltransferase VARPA_RS26495 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain VARPA_RS26495 PF05221 S-adenosyl-L-homocysteine hydrolase VARPA_RS26510 PF00561 alpha/beta hydrolase fold VARPA_RS26520 PF00561 alpha/beta hydrolase fold VARPA_RS26530 PF00009 Elongation factor Tu GTP binding domain VARPA_RS26530 PF03144 Elongation factor Tu domain 2 VARPA_RS26530 PF16658 Class II release factor RF3, C-terminal domain VARPA_RS26545 PF00005 ABC transporter VARPA_RS26565 PF02661 Fic/DOC family VARPA_RS26565 PF13784 Fic/DOC family N-terminal VARPA_RS26570 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS26575 PF00850 Histone deacetylase domain VARPA_RS26580 PF02423 Ornithine cyclodeaminase/mu-crystallin family VARPA_RS26585 PF17760 UvrA interaction domain VARPA_RS26585 PF00005 ABC transporter VARPA_RS26585 PF17755 UvrA DNA-binding domain VARPA_RS26600 PF08946 Osmosensory transporter coiled coil VARPA_RS26600 PF00083 Sugar (and other) transporter VARPA_RS26620 PF01810 LysE type translocator VARPA_RS26625 PF00682 HMGL-like VARPA_RS26630 PF03466 LysR substrate binding domain VARPA_RS26630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS26635 PF02515 CoA-transferase family III VARPA_RS26640 PF04444 Catechol dioxygenase N terminus VARPA_RS26640 PF00775 Dioxygenase VARPA_RS26650 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS26655 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS26660 PF00708 Acylphosphatase VARPA_RS26665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS26665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS26665 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS26670 PF02515 CoA-transferase family III VARPA_RS26675 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS26685 PF09339 IclR helix-turn-helix domain VARPA_RS26685 PF01614 Bacterial transcriptional regulator VARPA_RS26690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VARPA_RS26705 PF02785 Biotin carboxylase C-terminal domain VARPA_RS26705 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS26705 PF00364 Biotin-requiring enzyme VARPA_RS26705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS26715 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS26720 PF01039 Carboxyl transferase domain VARPA_RS26725 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS26725 PF00501 AMP-binding enzyme VARPA_RS26730 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS26730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS26730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS26750 PF13419 Haloacid dehalogenase-like hydrolase VARPA_RS26755 PF13667 ThiC-associated domain VARPA_RS26755 PF01964 Radical SAM ThiC family VARPA_RS26765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS26765 PF00072 Response regulator receiver domain VARPA_RS26765 PF09308 LuxQ, periplasmic VARPA_RS26765 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS26770 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS26775 PF01425 Amidase VARPA_RS26780 PF00149 Calcineurin-like phosphoesterase VARPA_RS26785 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS26785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS26785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS26790 PF01546 Peptidase family M20/M25/M40 VARPA_RS26790 PF07687 Peptidase dimerisation domain VARPA_RS26795 PF00108 Thiolase, N-terminal domain VARPA_RS26795 PF02803 Thiolase, C-terminal domain VARPA_RS26800 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) VARPA_RS26805 PF00484 Carbonic anhydrase VARPA_RS26810 PF13411 MerR HTH family regulatory protein VARPA_RS26825 PF00849 RNA pseudouridylate synthase VARPA_RS26835 PF00920 Dehydratase family VARPA_RS26840 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS26845 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS26845 PF07729 FCD domain VARPA_RS26850 PF17912 MalK OB fold domain VARPA_RS26850 PF03459 TOBE domain VARPA_RS26850 PF00005 ABC transporter VARPA_RS26860 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS26865 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS26895 PF05746 DALR anticodon binding domain VARPA_RS26895 PF02092 Glycyl-tRNA synthetase beta subunit VARPA_RS26900 PF02091 Glycyl-tRNA synthetase alpha subunit VARPA_RS26905 PF00781 Diacylglycerol kinase catalytic domain VARPA_RS26920 PF00710 Asparaginase, N-terminal VARPA_RS26920 PF17763 Glutaminase/Asparaginase C-terminal domain VARPA_RS26930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS26930 PF03466 LysR substrate binding domain VARPA_RS26935 PF07690 Major Facilitator Superfamily VARPA_RS26940 PF07519 Tannase and feruloyl esterase VARPA_RS26945 PF00106 short chain dehydrogenase VARPA_RS26950 PF05853 beta-keto acid cleavage enzyme VARPA_RS26955 PF00005 ABC transporter VARPA_RS26960 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS26960 PF00005 ABC transporter VARPA_RS26970 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS26975 PF13458 Periplasmic binding protein VARPA_RS26995 PF01979 Amidohydrolase family VARPA_RS27000 PF02633 Creatinine amidohydrolase VARPA_RS27010 PF00005 ABC transporter VARPA_RS27015 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS27025 PF00795 Carbon-nitrogen hydrolase VARPA_RS27030 PF00571 CBS domain VARPA_RS27030 PF03471 Transporter associated domain VARPA_RS27040 PF01037 Lrp/AsnC ligand binding domain VARPA_RS27045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VARPA_RS27050 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS27055 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VARPA_RS27060 PF00501 AMP-binding enzyme VARPA_RS27060 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS27095 PF00005 ABC transporter VARPA_RS27095 PF12848 ABC transporter VARPA_RS27095 PF16326 ABC transporter C-terminal domain VARPA_RS27100 PF13091 PLD-like domain VARPA_RS27130 PF01914 MarC family integral membrane protein VARPA_RS27140 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS27150 PF01494 FAD binding domain VARPA_RS27160 PF01435 Peptidase family M48 VARPA_RS27200 PF00202 Aminotransferase class-III VARPA_RS27205 PF00551 Formyl transferase VARPA_RS27230 PF02785 Biotin carboxylase C-terminal domain VARPA_RS27230 PF00289 Biotin carboxylase, N-terminal domain VARPA_RS27230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VARPA_RS27235 PF00501 AMP-binding enzyme VARPA_RS27235 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS27240 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS27245 PF13458 Periplasmic binding protein VARPA_RS27250 PF02371 Transposase IS116/IS110/IS902 family VARPA_RS27250 PF01548 Transposase VARPA_RS27255 PF00258 Flavodoxin VARPA_RS27255 PF00175 Oxidoreductase NAD-binding domain VARPA_RS27255 PF00067 Cytochrome P450 VARPA_RS27255 PF00667 FAD binding domain VARPA_RS27265 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS27280 PF06974 Protein of unknown function (DUF1298) VARPA_RS27280 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain VARPA_RS27285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VARPA_RS27285 PF00326 Prolyl oligopeptidase family VARPA_RS27290 PF00491 Arginase family VARPA_RS27300 PF00485 Phosphoribulokinase / Uridine kinase family VARPA_RS27305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase VARPA_RS27305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain VARPA_RS27315 PF01037 Lrp/AsnC ligand binding domain VARPA_RS27320 PF01168 Alanine racemase, N-terminal domain VARPA_RS27325 PF00437 Type II/IV secretion system protein VARPA_RS27330 PF00437 Type II/IV secretion system protein VARPA_RS27335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS27335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS27345 PF13580 SIS domain VARPA_RS27350 PF02021 Uncharacterised protein family UPF0102 VARPA_RS27355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VARPA_RS27375 PF00440 Bacterial regulatory proteins, tetR family VARPA_RS27375 PF08361 MAATS-type transcriptional repressor, C-terminal region VARPA_RS27380 PF00529 HlyD membrane-fusion protein of T1SS VARPA_RS27380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VARPA_RS27385 PF00873 AcrB/AcrD/AcrF family VARPA_RS27390 PF02321 Outer membrane efflux protein VARPA_RS27440 PF00085 Thioredoxin VARPA_RS27445 PF00270 DEAD/DEAH box helicase VARPA_RS27445 PF08494 DEAD/H associated VARPA_RS27445 PF00271 Helicase conserved C-terminal domain VARPA_RS27450 PF04675 DNA ligase N terminus VARPA_RS27450 PF01068 ATP dependent DNA ligase domain VARPA_RS27450 PF04679 ATP dependent DNA ligase C terminal region VARPA_RS27455 PF01068 ATP dependent DNA ligase domain VARPA_RS27455 PF04675 DNA ligase N terminus VARPA_RS27455 PF04679 ATP dependent DNA ligase C terminal region VARPA_RS27470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VARPA_RS27470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VARPA_RS27475 PF13407 Periplasmic binding protein domain VARPA_RS27480 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS27485 PF00005 ABC transporter VARPA_RS27490 PF01047 MarR family VARPA_RS27490 PF00480 ROK family VARPA_RS27495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VARPA_RS27495 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VARPA_RS27500 PF02874 ATP synthase alpha/beta family, beta-barrel domain VARPA_RS27500 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VARPA_RS27510 PF00231 ATP synthase VARPA_RS27515 PF02874 ATP synthase alpha/beta family, beta-barrel domain VARPA_RS27515 PF00306 ATP synthase alpha/beta chain, C terminal domain VARPA_RS27515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VARPA_RS27520 PF00213 ATP synthase delta (OSCP) subunit VARPA_RS27525 PF00430 ATP synthase B/B' CF(0) VARPA_RS27530 PF00137 ATP synthase subunit C VARPA_RS27535 PF00119 ATP synthase A chain VARPA_RS27545 PF01063 Amino-transferase class IV VARPA_RS27550 PF04359 Protein of unknown function (DUF493) VARPA_RS27555 PF03099 Biotin/lipoate A/B protein ligase family VARPA_RS27560 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VARPA_RS27560 PF04055 Radical SAM superfamily VARPA_RS27580 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS27580 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS27600 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS27600 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS27605 PF10431 C-terminal, D2-small domain, of ClpB protein VARPA_RS27605 PF17871 AAA lid domain VARPA_RS27605 PF07724 AAA domain (Cdc48 subfamily) VARPA_RS27605 PF00004 ATPase family associated with various cellular activities (AAA) VARPA_RS27615 PF05947 Type VI secretion system, TssF VARPA_RS27630 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VARPA_RS27635 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 VARPA_RS27650 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VARPA_RS27665 PF04972 BON domain VARPA_RS27665 PF00691 OmpA family VARPA_RS27675 PF06744 Type VI secretion protein IcmF C-terminal VARPA_RS27675 PF06761 Intracellular multiplication and human macrophage-killing VARPA_RS27675 PF14331 ImcF-related N-terminal domain VARPA_RS27700 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS27700 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS27735 PF00501 AMP-binding enzyme VARPA_RS27735 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS27740 PF00672 HAMP domain VARPA_RS27740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS27740 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS27745 PF00072 Response regulator receiver domain VARPA_RS27745 PF02954 Bacterial regulatory protein, Fis family VARPA_RS27745 PF00158 Sigma-54 interaction domain VARPA_RS27755 PF07690 Major Facilitator Superfamily VARPA_RS27760 PF03600 Citrate transporter VARPA_RS27785 PF00419 Fimbrial protein VARPA_RS27790 PF00577 Outer membrane usher protein VARPA_RS27790 PF13954 PapC N-terminal domain VARPA_RS27790 PF13953 PapC C-terminal domain VARPA_RS27795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VARPA_RS27795 PF02753 Pili assembly chaperone PapD, C-terminal domain VARPA_RS27800 PF00419 Fimbrial protein VARPA_RS27805 PF16884 N-terminal domain of oxidoreductase VARPA_RS27805 PF00107 Zinc-binding dehydrogenase VARPA_RS27810 PF00672 HAMP domain VARPA_RS27810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS27810 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS27810 PF16750 Sensor domain of 2-component histidine kinase VARPA_RS27815 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS27815 PF00072 Response regulator receiver domain VARPA_RS27835 PF05524 PEP-utilising enzyme, N-terminal VARPA_RS27835 PF00391 PEP-utilising enzyme, mobile domain VARPA_RS27835 PF02896 PEP-utilising enzyme, TIM barrel domain VARPA_RS27840 PF00381 PTS HPr component phosphorylation site VARPA_RS27855 PF00578 AhpC/TSA family VARPA_RS27860 PF01322 Cytochrome C' VARPA_RS27875 PF08534 Redoxin VARPA_RS27880 PF00366 Ribosomal protein S17 VARPA_RS27885 PF00831 Ribosomal L29 protein VARPA_RS27890 PF00252 Ribosomal protein L16p/L10e VARPA_RS27895 PF00189 Ribosomal protein S3, C-terminal domain VARPA_RS27895 PF07650 KH domain VARPA_RS27900 PF00237 Ribosomal protein L22p/L17e VARPA_RS27905 PF00203 Ribosomal protein S19 VARPA_RS27910 PF03947 Ribosomal Proteins L2, C-terminal domain VARPA_RS27910 PF00181 Ribosomal Proteins L2, RNA binding domain VARPA_RS27915 PF00276 Ribosomal protein L23 VARPA_RS27920 PF00573 Ribosomal protein L4/L1 family VARPA_RS27925 PF00297 Ribosomal protein L3 VARPA_RS27940 PF00338 Ribosomal protein S10p/S20e VARPA_RS27945 PF03143 Elongation factor Tu C-terminal domain VARPA_RS27945 PF03144 Elongation factor Tu domain 2 VARPA_RS27945 PF00009 Elongation factor Tu GTP binding domain VARPA_RS27950 PF00009 Elongation factor Tu GTP binding domain VARPA_RS27950 PF14492 Elongation Factor G, domain II VARPA_RS27950 PF03764 Elongation factor G, domain IV VARPA_RS27950 PF03144 Elongation factor Tu domain 2 VARPA_RS27950 PF00679 Elongation factor G C-terminus VARPA_RS27955 PF00177 Ribosomal protein S7p/S5e VARPA_RS27960 PF00164 Ribosomal protein S12/S23 VARPA_RS27965 PF00768 D-alanyl-D-alanine carboxypeptidase VARPA_RS27965 PF07943 Penicillin-binding protein 5, C-terminal domain VARPA_RS27970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VARPA_RS27985 PF03653 Uncharacterised protein family (UPF0093) VARPA_RS27990 PF00490 Delta-aminolevulinic acid dehydratase VARPA_RS27995 PF01544 CorA-like Mg2+ transporter protein VARPA_RS28010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28010 PF03466 LysR substrate binding domain VARPA_RS28015 PF01738 Dienelactone hydrolase family VARPA_RS28020 PF01323 DSBA-like thioredoxin domain VARPA_RS28030 PF01914 MarC family integral membrane protein VARPA_RS28045 PF00501 AMP-binding enzyme VARPA_RS28050 PF00005 ABC transporter VARPA_RS28055 PF00005 ABC transporter VARPA_RS28055 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS28065 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS28075 PF07859 alpha/beta hydrolase fold VARPA_RS28080 PF02222 ATP-grasp domain VARPA_RS28085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VARPA_RS28085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VARPA_RS28100 PF03309 Type III pantothenate kinase VARPA_RS28105 PF01476 LysM domain VARPA_RS28105 PF04972 BON domain VARPA_RS28120 PF03480 Bacterial extracellular solute-binding protein, family 7 VARPA_RS28130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS28130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VARPA_RS28135 PF00391 PEP-utilising enzyme, mobile domain VARPA_RS28135 PF02896 PEP-utilising enzyme, TIM barrel domain VARPA_RS28135 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VARPA_RS28140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VARPA_RS28140 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS28145 PF08546 Ketopantoate reductase PanE/ApbA C terminal VARPA_RS28145 PF02558 Ketopantoate reductase PanE/ApbA VARPA_RS28150 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus VARPA_RS28150 PF01048 Phosphorylase superfamily VARPA_RS28155 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28165 PF00067 Cytochrome P450 VARPA_RS28175 PF02798 Glutathione S-transferase, N-terminal domain VARPA_RS28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28180 PF03466 LysR substrate binding domain VARPA_RS28195 PF00005 ABC transporter VARPA_RS28200 PF01061 ABC-2 type transporter VARPA_RS28205 PF01047 MarR family VARPA_RS28210 PF02566 OsmC-like protein VARPA_RS28220 PF01636 Phosphotransferase enzyme family VARPA_RS28225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28225 PF03466 LysR substrate binding domain VARPA_RS28230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS28230 PF18158 Adaptive response protein AidB N-terminal domain VARPA_RS28230 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS28235 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28240 PF02515 CoA-transferase family III VARPA_RS28245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VARPA_RS28245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VARPA_RS28245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VARPA_RS28270 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28275 PF05762 VWA domain containing CoxE-like protein VARPA_RS28285 PF07728 AAA domain (dynein-related subfamily) VARPA_RS28305 PF00183 Hsp90 protein VARPA_RS28305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS28320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28320 PF03466 LysR substrate binding domain VARPA_RS28325 PF08240 Alcohol dehydrogenase GroES-like domain VARPA_RS28325 PF00107 Zinc-binding dehydrogenase VARPA_RS28325 PF16197 Ketoacyl-synthetase C-terminal extension VARPA_RS28325 PF00109 Beta-ketoacyl synthase, N-terminal domain VARPA_RS28325 PF00550 Phosphopantetheine attachment site VARPA_RS28325 PF14765 Polyketide synthase dehydratase VARPA_RS28325 PF08659 KR domain VARPA_RS28325 PF00698 Acyl transferase domain VARPA_RS28325 PF02801 Beta-ketoacyl synthase, C-terminal domain VARPA_RS28330 PF00230 Major intrinsic protein VARPA_RS28340 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS28340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS28340 PF08521 Two-component sensor kinase N-terminal VARPA_RS28345 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS28345 PF00072 Response regulator receiver domain VARPA_RS28355 PF00849 RNA pseudouridylate synthase VARPA_RS28355 PF01479 S4 domain VARPA_RS28360 PF00293 NUDIX domain VARPA_RS28360 PF01467 Cytidylyltransferase-like VARPA_RS28365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VARPA_RS28370 PF04101 Glycosyltransferase family 28 C-terminal domain VARPA_RS28370 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase VARPA_RS28390 PF00679 Elongation factor G C-terminus VARPA_RS28390 PF03144 Elongation factor Tu domain 2 VARPA_RS28390 PF00009 Elongation factor Tu GTP binding domain VARPA_RS28390 PF14492 Elongation Factor G, domain II VARPA_RS28390 PF03764 Elongation factor G, domain IV VARPA_RS28405 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS28405 PF00072 Response regulator receiver domain VARPA_RS28410 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS28410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS28410 PF13492 GAF domain VARPA_RS28410 PF13493 Domain of unknown function (DUF4118) VARPA_RS28410 PF02702 Osmosensitive K+ channel His kinase sensor domain VARPA_RS28420 PF02669 K+-transporting ATPase, c chain VARPA_RS28430 PF03814 Potassium-transporting ATPase A subunit VARPA_RS28440 PF13533 Biotin-lipoyl like VARPA_RS28445 PF00873 AcrB/AcrD/AcrF family VARPA_RS28450 PF02321 Outer membrane efflux protein VARPA_RS28460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VARPA_RS28460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VARPA_RS28470 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28475 PF16123 Hydroxyacylglutathione hydrolase C-terminus VARPA_RS28475 PF00753 Metallo-beta-lactamase superfamily VARPA_RS28485 PF00106 short chain dehydrogenase VARPA_RS28495 PF13545 Crp-like helix-turn-helix domain VARPA_RS28495 PF00027 Cyclic nucleotide-binding domain VARPA_RS28500 PF00501 AMP-binding enzyme VARPA_RS28505 PF00005 ABC transporter VARPA_RS28505 PF12399 Branched-chain amino acid ATP-binding cassette transporter VARPA_RS28525 PF00005 ABC transporter VARPA_RS28530 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS28530 PF00501 AMP-binding enzyme VARPA_RS28535 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS28535 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS28565 PF00285 Citrate synthase, C-terminal domain VARPA_RS28570 PF00285 Citrate synthase, C-terminal domain VARPA_RS28575 PF01965 DJ-1/PfpI family VARPA_RS28580 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28590 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS28590 PF00072 Response regulator receiver domain VARPA_RS28595 PF13360 PQQ-like domain VARPA_RS28595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VARPA_RS28605 PF06715 Gp5 C-terminal repeat (3 copies) VARPA_RS28605 PF04717 Type VI secretion system, phage-baseplate injector VARPA_RS28610 PF05593 RHS Repeat VARPA_RS28610 PF03527 RHS protein VARPA_RS28620 PF01011 PQQ enzyme repeat VARPA_RS28625 PF01325 Iron dependent repressor, N-terminal DNA binding domain VARPA_RS28625 PF00480 ROK family VARPA_RS28630 PF00005 ABC transporter VARPA_RS28635 PF02653 Branched-chain amino acid transport system / permease component VARPA_RS28640 PF13407 Periplasmic binding protein domain VARPA_RS28650 PF00676 Dehydrogenase E1 component VARPA_RS28655 PF02780 Transketolase, C-terminal domain VARPA_RS28655 PF02779 Transketolase, pyrimidine binding domain VARPA_RS28665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28665 PF03466 LysR substrate binding domain VARPA_RS28670 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS28685 PF01494 FAD binding domain VARPA_RS28695 PF00378 Enoyl-CoA hydratase/isomerase VARPA_RS28700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VARPA_RS28700 PF02770 Acyl-CoA dehydrogenase, middle domain VARPA_RS28700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VARPA_RS28705 PF00501 AMP-binding enzyme VARPA_RS28705 PF13193 AMP-binding enzyme C-terminal domain VARPA_RS28715 PF12833 Helix-turn-helix domain VARPA_RS28715 PF01965 DJ-1/PfpI family VARPA_RS28730 PF01196 Ribosomal protein L17 VARPA_RS28735 PF01000 RNA polymerase Rpb3/RpoA insert domain VARPA_RS28735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VARPA_RS28735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VARPA_RS28740 PF01479 S4 domain VARPA_RS28740 PF00163 Ribosomal protein S4/S9 N-terminal domain VARPA_RS28745 PF00411 Ribosomal protein S11 VARPA_RS28750 PF00416 Ribosomal protein S13/S18 VARPA_RS28755 PF00344 SecY translocase VARPA_RS28760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VARPA_RS28765 PF00327 Ribosomal protein L30p/L7e VARPA_RS28770 PF03719 Ribosomal protein S5, C-terminal domain VARPA_RS28770 PF00333 Ribosomal protein S5, N-terminal domain VARPA_RS28775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VARPA_RS28780 PF00347 Ribosomal protein L6 VARPA_RS28785 PF00410 Ribosomal protein S8 VARPA_RS28790 PF00253 Ribosomal protein S14p/S29e VARPA_RS28795 PF00673 ribosomal L5P family C-terminus VARPA_RS28795 PF00281 Ribosomal protein L5 VARPA_RS28800 PF00467 KOW motif VARPA_RS28800 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VARPA_RS28805 PF00238 Ribosomal protein L14p/L23e VARPA_RS28815 PF14748 Pyrroline-5-carboxylate reductase dimerisation VARPA_RS28815 PF03807 NADP oxidoreductase coenzyme F420-dependent VARPA_RS28820 PF01575 MaoC like domain VARPA_RS28825 PF01040 UbiA prenyltransferase family VARPA_RS28830 PF00210 Ferritin-like domain VARPA_RS28835 PF03466 LysR substrate binding domain VARPA_RS28835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS28845 PF00654 Voltage gated chloride channel VARPA_RS28850 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS28850 PF03895 YadA-like membrane anchor domain VARPA_RS28850 PF05658 Head domain of trimeric autotransporter adhesin VARPA_RS28850 PF05662 Coiled stalk of trimeric autotransporter adhesin VARPA_RS28865 PF01810 LysE type translocator VARPA_RS28870 PF00270 DEAD/DEAH box helicase VARPA_RS28870 PF00271 Helicase conserved C-terminal domain VARPA_RS28870 PF17191 RecG wedge domain VARPA_RS28875 PF08338 Domain of unknown function (DUF1731) VARPA_RS28875 PF01370 NAD dependent epimerase/dehydratase family VARPA_RS28885 PF02547 Queuosine biosynthesis protein VARPA_RS28890 PF01702 Queuine tRNA-ribosyltransferase VARPA_RS28945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VARPA_RS28960 PF00814 Glycoprotease family VARPA_RS28965 PF08220 DeoR-like helix-turn-helix domain VARPA_RS28965 PF00455 DeoR C terminal sensor domain VARPA_RS28970 PF00293 NUDIX domain VARPA_RS28975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VARPA_RS28985 PF01300 Telomere recombination VARPA_RS28985 PF03481 Putative GTP-binding controlling metal-binding VARPA_RS28990 PF02222 ATP-grasp domain VARPA_RS28990 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VARPA_RS28995 PF00731 AIR carboxylase VARPA_RS29000 PF00085 Thioredoxin VARPA_RS29005 PF01381 Helix-turn-helix VARPA_RS29010 PF13657 HipA N-terminal domain VARPA_RS29010 PF07804 HipA-like C-terminal domain VARPA_RS29020 PF01259 SAICAR synthetase VARPA_RS29025 PF01116 Fructose-bisphosphate aldolase class-II VARPA_RS29035 PF01037 Lrp/AsnC ligand binding domain VARPA_RS29040 PF00291 Pyridoxal-phosphate dependent enzyme VARPA_RS29045 PF00224 Pyruvate kinase, barrel domain VARPA_RS29045 PF02887 Pyruvate kinase, alpha/beta domain VARPA_RS29050 PF00162 Phosphoglycerate kinase VARPA_RS29055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS29055 PF03466 LysR substrate binding domain VARPA_RS29070 PF01494 FAD binding domain VARPA_RS29085 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS29100 PF02911 Formyl transferase, C-terminal domain VARPA_RS29100 PF00551 Formyl transferase VARPA_RS29110 PF01327 Polypeptide deformylase VARPA_RS29120 PF02481 DNA recombination-mediator protein A VARPA_RS29120 PF17782 DprA winged helix domain VARPA_RS29125 PF04361 Protein of unknown function (DUF494) VARPA_RS29135 PF07549 SecD/SecF GG Motif VARPA_RS29135 PF02355 Protein export membrane protein VARPA_RS29140 PF13721 SecD export protein N-terminal TM region VARPA_RS29140 PF07549 SecD/SecF GG Motif VARPA_RS29140 PF02355 Protein export membrane protein VARPA_RS29145 PF02699 Preprotein translocase subunit VARPA_RS29155 PF01037 Lrp/AsnC ligand binding domain VARPA_RS29175 PF00497 Bacterial extracellular solute-binding proteins, family 3 VARPA_RS29180 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS29185 PF05977 Transmembrane secretion effector VARPA_RS29190 PF02633 Creatinine amidohydrolase VARPA_RS29195 PF00005 ABC transporter VARPA_RS29200 PF00528 Binding-protein-dependent transport system inner membrane component VARPA_RS29205 PF01565 FAD binding domain VARPA_RS29205 PF04030 D-arabinono-1,4-lactone oxidase VARPA_RS29220 PF00111 2Fe-2S iron-sulfur cluster binding domain VARPA_RS29220 PF00175 Oxidoreductase NAD-binding domain VARPA_RS29230 PF01042 Endoribonuclease L-PSP VARPA_RS29240 PF01261 Xylose isomerase-like TIM barrel VARPA_RS29245 PF00596 Class II Aldolase and Adducin N-terminal domain VARPA_RS29250 PF17042 Nucleotide-binding C-terminal domain VARPA_RS29250 PF07005 Sugar-binding N-terminal domain VARPA_RS29255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VARPA_RS29255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VARPA_RS29260 PF00456 Transketolase, thiamine diphosphate binding domain VARPA_RS29260 PF17831 Pyruvate dehydrogenase E1 component middle domain VARPA_RS29265 PF01037 Lrp/AsnC ligand binding domain VARPA_RS29295 PF00196 Bacterial regulatory proteins, luxR family VARPA_RS29295 PF00072 Response regulator receiver domain VARPA_RS29300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS29300 PF00989 PAS fold VARPA_RS29300 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS29305 PF00795 Carbon-nitrogen hydrolase VARPA_RS29315 PF08335 GlnD PII-uridylyltransferase VARPA_RS29315 PF03710 Glutamate-ammonia ligase adenylyltransferase VARPA_RS29320 PF05036 Sporulation related domain VARPA_RS29320 PF03330 Lytic transglycolase VARPA_RS29325 PF02627 Carboxymuconolactone decarboxylase family VARPA_RS29330 PF08281 Sigma-70, region 4 VARPA_RS29330 PF12680 SnoaL-like domain VARPA_RS29330 PF04542 Sigma-70 region 2 VARPA_RS29340 PF00255 Glutathione peroxidase VARPA_RS29345 PF01593 Flavin containing amine oxidoreductase VARPA_RS29365 PF00106 short chain dehydrogenase VARPA_RS29370 PF13417 Glutathione S-transferase, N-terminal domain VARPA_RS29370 PF00043 Glutathione S-transferase, C-terminal domain VARPA_RS29375 PF00206 Lyase VARPA_RS29375 PF08328 Adenylosuccinate lyase C-terminal VARPA_RS29385 PF07660 Secretin and TonB N terminus short domain VARPA_RS29385 PF07715 TonB-dependent Receptor Plug Domain VARPA_RS29385 PF00593 TonB dependent receptor VARPA_RS29390 PF07152 YaeQ protein VARPA_RS29405 PF03741 Integral membrane protein TerC family VARPA_RS29415 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV VARPA_RS29420 PF01435 Peptidase family M48 VARPA_RS29420 PF07720 Tetratricopeptide repeat VARPA_RS29425 PF01967 MoaC family VARPA_RS29435 PF05567 Neisseria PilC beta-propeller domain VARPA_RS29465 PF13333 Integrase core domain VARPA_RS29465 PF00665 Integrase core domain VARPA_RS29465 PF13276 HTH-like domain VARPA_RS29475 PF00114 Pilin (bacterial filament) VARPA_RS29475 PF07963 Prokaryotic N-terminal methylation motif VARPA_RS29480 PF12706 Beta-lactamase superfamily domain VARPA_RS29485 PF00211 Adenylate and Guanylate cyclase catalytic domain VARPA_RS29490 PF00498 FHA domain VARPA_RS29500 PF03741 Integral membrane protein TerC family VARPA_RS29505 PF02629 CoA binding domain VARPA_RS29505 PF00549 CoA-ligase VARPA_RS29510 PF08442 ATP-grasp domain VARPA_RS29510 PF00549 CoA-ligase VARPA_RS29515 PF01118 Semialdehyde dehydrogenase, NAD binding domain VARPA_RS29525 PF05360 yiaA/B two helix domain VARPA_RS29535 PF02631 RecX family VARPA_RS29540 PF00154 recA bacterial DNA recombination protein VARPA_RS29550 PF00486 Transcriptional regulatory protein, C terminal VARPA_RS29550 PF00072 Response regulator receiver domain VARPA_RS29560 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS29560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS29560 PF08521 Two-component sensor kinase N-terminal VARPA_RS29575 PF02237 Biotin protein ligase C terminal domain VARPA_RS29575 PF03099 Biotin/lipoate A/B protein ligase family VARPA_RS29575 PF08279 HTH domain VARPA_RS29585 PF01131 DNA topoisomerase VARPA_RS29585 PF01751 Toprim domain VARPA_RS29595 PF07722 Peptidase C26 VARPA_RS29610 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS29610 PF00155 Aminotransferase class I and II VARPA_RS29615 PF07690 Major Facilitator Superfamily VARPA_RS29625 PF01176 Translation initiation factor 1A / IF-1 VARPA_RS29630 PF00271 Helicase conserved C-terminal domain VARPA_RS29630 PF00270 DEAD/DEAH box helicase VARPA_RS29630 PF03880 DbpA RNA binding domain VARPA_RS29635 PF01554 MatE VARPA_RS29645 PF00892 EamA-like transporter family VARPA_RS29655 PF07729 FCD domain VARPA_RS29655 PF00392 Bacterial regulatory proteins, gntR family VARPA_RS29660 PF07992 Pyridine nucleotide-disulphide oxidoreductase VARPA_RS29660 PF17806 Sarcosine oxidase A3 domain VARPA_RS29670 PF01266 FAD dependent oxidoreductase VARPA_RS29675 PF05544 Proline racemase VARPA_RS29680 PF13458 Periplasmic binding protein VARPA_RS29685 PF00701 Dihydrodipicolinate synthetase family VARPA_RS29690 PF13657 HipA N-terminal domain VARPA_RS29690 PF07804 HipA-like C-terminal domain VARPA_RS29705 PF01546 Peptidase family M20/M25/M40 VARPA_RS29705 PF07687 Peptidase dimerisation domain VARPA_RS29710 PF02678 Pirin VARPA_RS29710 PF05726 Pirin C-terminal cupin domain VARPA_RS29720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS29720 PF03466 LysR substrate binding domain VARPA_RS29725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VARPA_RS29740 PF05726 Pirin C-terminal cupin domain VARPA_RS29740 PF02678 Pirin VARPA_RS29750 PF03401 Tripartite tricarboxylate transporter family receptor VARPA_RS29755 PF00180 Isocitrate/isopropylmalate dehydrogenase VARPA_RS29760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VARPA_RS29760 PF03466 LysR substrate binding domain VARPA_RS29765 PF16485 Protealysin propeptide VARPA_RS29765 PF02868 Thermolysin metallopeptidase, alpha-helical domain VARPA_RS29765 PF01447 Thermolysin metallopeptidase, catalytic domain VARPA_RS29775 PF01566 Natural resistance-associated macrophage protein VARPA_RS29780 PF03992 Antibiotic biosynthesis monooxygenase VARPA_RS29795 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VARPA_RS29795 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VARPA_RS29800 PF02779 Transketolase, pyrimidine binding domain VARPA_RS29800 PF00456 Transketolase, thiamine diphosphate binding domain VARPA_RS29800 PF02780 Transketolase, C-terminal domain VARPA_RS29805 PF02675 S-adenosylmethionine decarboxylase VARPA_RS29810 PF00483 Nucleotidyl transferase VARPA_RS29815 PF05195 Aminopeptidase P, N-terminal domain VARPA_RS29815 PF00557 Metallopeptidase family M24 VARPA_RS29835 PF06832 Penicillin-Binding Protein C-terminus Family VARPA_RS29835 PF00912 Transglycosylase VARPA_RS29835 PF00905 Penicillin binding protein transpeptidase domain VARPA_RS29840 PF01835 MG2 domain VARPA_RS29840 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain VARPA_RS29840 PF17962 Bacterial macroglobulin domain 6 VARPA_RS29840 PF11974 Bacterial alpha-2-macroglobulin MG3 domain VARPA_RS29840 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain VARPA_RS29840 PF07703 Alpha-2-macroglobulin bait region domain VARPA_RS29840 PF00207 Alpha-2-macroglobulin family VARPA_RS29885 PF00390 Malic enzyme, N-terminal domain VARPA_RS29885 PF01515 Phosphate acetyl/butaryl transferase VARPA_RS29885 PF03949 Malic enzyme, NAD binding domain VARPA_RS29890 PF00545 ribonuclease VARPA_RS29900 PF00398 Ribosomal RNA adenine dimethylase VARPA_RS29905 PF00639 PPIC-type PPIASE domain VARPA_RS29905 PF09312 SurA N-terminal domain VARPA_RS29910 PF04453 LPS transport system D VARPA_RS29915 PF01636 Phosphotransferase enzyme family VARPA_RS29920 PF04452 RNA methyltransferase VARPA_RS29935 PF07690 Major Facilitator Superfamily VARPA_RS29940 PF12146 Serine aminopeptidase, S33 VARPA_RS29960 PF00027 Cyclic nucleotide-binding domain VARPA_RS29960 PF00520 Ion transport protein VARPA_RS29965 PF01205 Uncharacterized protein family UPF0029 VARPA_RS29965 PF09186 Domain of unknown function (DUF1949) VARPA_RS29970 PF07021 Methionine biosynthesis protein MetW VARPA_RS29970 PF00561 alpha/beta hydrolase fold VARPA_RS29975 PF00561 alpha/beta hydrolase fold VARPA_RS29980 PF01169 Uncharacterized protein family UPF0016 VARPA_RS29985 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VARPA_RS29990 PF00106 short chain dehydrogenase VARPA_RS30005 PF00571 CBS domain VARPA_RS30005 PF01380 SIS domain VARPA_RS30010 PF02254 TrkA-N domain VARPA_RS30010 PF02080 TrkA-C domain VARPA_RS30010 PF00999 Sodium/hydrogen exchanger family VARPA_RS30020 PF01740 STAS domain VARPA_RS30020 PF04960 Glutaminase VARPA_RS30020 PF00027 Cyclic nucleotide-binding domain VARPA_RS30025 PF10396 GTP-binding protein TrmE N-terminus VARPA_RS30025 PF01926 50S ribosome-binding GTPase VARPA_RS30025 PF12631 MnmE helical domain VARPA_RS30030 PF14849 YidC periplasmic domain VARPA_RS30030 PF02096 60Kd inner membrane protein VARPA_RS30035 PF01809 Putative membrane protein insertion efficiency factor VARPA_RS30040 PF00825 Ribonuclease P VARPA_RS30045 PF00468 Ribosomal protein L34 VARPA_RS30090 PF00535 Glycosyl transferase family 2 VARPA_RS30095 PF12852 Cupin VARPA_RS30095 PF12833 Helix-turn-helix domain VARPA_RS30110 PF01627 Hpt domain VARPA_RS30110 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS30110 PF00072 Response regulator receiver domain VARPA_RS30110 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VARPA_RS30110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS30110 PF00672 HAMP domain VARPA_RS30115 PF07519 Tannase and feruloyl esterase VARPA_RS30140 PF01555 DNA methylase VARPA_RS30170 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain VARPA_RS30170 PF13332 Hemagglutinin repeat VARPA_RS30170 PF05594 Haemagluttinin repeat VARPA_RS30170 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS30170 PF05860 haemagglutination activity domain VARPA_RS30220 PF08448 PAS fold VARPA_RS30220 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS30220 PF00072 Response regulator receiver domain VARPA_RS30220 PF13426 PAS domain VARPA_RS30220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS30245 PF00005 ABC transporter VARPA_RS30245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VARPA_RS30275 PF04829 Pre-toxin domain with VENN motif VARPA_RS30275 PF05860 haemagglutination activity domain VARPA_RS30275 PF13332 Hemagglutinin repeat VARPA_RS30275 PF13018 Extended Signal Peptide of Type V secretion system VARPA_RS30285 PF00512 His Kinase A (phospho-acceptor) domain VARPA_RS30285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VARPA_RS30370 PF03797 Autotransporter beta-domain VARPA_RS30370 PF00082 Subtilase family VARPA_RS30370 PF12951 Passenger-associated-transport-repeat