locus-tag class description INQ48_RS00005 PF00308 Bacterial dnaA protein INQ48_RS00005 PF11638 DnaA N-terminal domain INQ48_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix INQ48_RS00010 PF02767 DNA polymerase III beta subunit, central domain INQ48_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain INQ48_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain INQ48_RS00015 PF00204 DNA gyrase B INQ48_RS00015 PF01751 Toprim domain INQ48_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus INQ48_RS00015 PF18053 DNA gyrase B subunit insert domain INQ48_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS00030 PF00149 Calcineurin-like phosphoesterase INQ48_RS00040 PF09411 Lipid A 3-O-deacylase (PagL) INQ48_RS00045 PF03706 Lysylphosphatidylglycerol synthase TM region INQ48_RS00050 PF13091 PLD-like domain INQ48_RS00055 PF03372 Endonuclease/Exonuclease/phosphatase family INQ48_RS00075 PF02678 Pirin INQ48_RS00075 PF05726 Pirin C-terminal cupin domain INQ48_RS00085 PF03055 Retinal pigment epithelial membrane protein INQ48_RS00095 PF00583 Acetyltransferase (GNAT) family INQ48_RS00100 PF00912 Transglycosylase INQ48_RS00120 PF06123 Inner membrane protein CreD INQ48_RS00125 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ48_RS00130 PF17092 Penicillin-binding protein OB-like domain INQ48_RS00130 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS00130 PF00912 Transglycosylase INQ48_RS00140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS00140 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS00140 PF00672 HAMP domain INQ48_RS00145 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS00145 PF00072 Response regulator receiver domain INQ48_RS00155 PF09278 MerR, DNA binding INQ48_RS00155 PF00376 MerR family regulatory protein INQ48_RS00160 PF00403 Heavy-metal-associated domain INQ48_RS00165 PF00403 Heavy-metal-associated domain INQ48_RS00170 PF13508 Acetyltransferase (GNAT) domain INQ48_RS00170 PF00583 Acetyltransferase (GNAT) family INQ48_RS00175 PF04116 Fatty acid hydroxylase superfamily INQ48_RS00180 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS00180 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS00185 PF00550 Phosphopantetheine attachment site INQ48_RS00195 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS00195 PF00072 Response regulator receiver domain INQ48_RS00200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS00200 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS00215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS00220 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS00220 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS00240 PF01134 Glucose inhibited division protein A INQ48_RS00240 PF13932 GidA associated domain INQ48_RS00245 PF02527 rRNA small subunit methyltransferase G INQ48_RS00250 PF01810 LysE type translocator INQ48_RS00255 PF13614 AAA domain INQ48_RS00265 PF17762 HTH domain found in ParB protein INQ48_RS00265 PF02195 ParB-like nuclease domain INQ48_RS00275 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS00275 PF01565 FAD binding domain INQ48_RS00280 PF01923 Cobalamin adenosyltransferase INQ48_RS00295 PF13472 GDSL-like Lipase/Acylhydrolase family INQ48_RS00310 PF01638 HxlR-like helix-turn-helix INQ48_RS00330 PF03466 LysR substrate binding domain INQ48_RS00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00350 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS00360 PF03776 Septum formation topological specificity factor MinE INQ48_RS00365 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ48_RS00370 PF03775 Septum formation inhibitor MinC, C-terminal domain INQ48_RS00370 PF05209 Septum formation inhibitor MinC, N-terminal domain INQ48_RS00375 PF00860 Permease family INQ48_RS00380 PF03061 Thioesterase superfamily INQ48_RS00400 PF00368 Hydroxymethylglutaryl-coenzyme A reductase INQ48_RS00405 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS00405 PF00155 Aminotransferase class I and II INQ48_RS00410 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS00420 PF00501 AMP-binding enzyme INQ48_RS00420 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS00425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS00425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS00435 PF05853 beta-keto acid cleavage enzyme INQ48_RS00445 PF06476 Protein of unknown function (DUF1090) INQ48_RS00450 PF13545 Crp-like helix-turn-helix domain INQ48_RS00450 PF00027 Cyclic nucleotide-binding domain INQ48_RS00455 PF00743 Flavin-binding monooxygenase-like INQ48_RS00465 PF12833 Helix-turn-helix domain INQ48_RS00465 PF12852 Cupin INQ48_RS00470 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS00485 PF01590 GAF domain INQ48_RS00485 PF00158 Sigma-54 interaction domain INQ48_RS00485 PF02954 Bacterial regulatory protein, Fis family INQ48_RS00495 PF00005 ABC transporter INQ48_RS00500 PF00005 ABC transporter INQ48_RS00500 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS00510 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS00520 PF00561 alpha/beta hydrolase fold INQ48_RS00525 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS00525 PF00501 AMP-binding enzyme INQ48_RS00530 PF00171 Aldehyde dehydrogenase family INQ48_RS00540 PF01202 Shikimate kinase INQ48_RS00545 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS00555 PF00970 Oxidoreductase FAD-binding domain INQ48_RS00555 PF00175 Oxidoreductase NAD-binding domain INQ48_RS00555 PF00037 4Fe-4S binding domain INQ48_RS00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS00590 PF04199 Putative cyclase INQ48_RS00595 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS00600 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS00605 PF00005 ABC transporter INQ48_RS00620 PF00501 AMP-binding enzyme INQ48_RS00620 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS00630 PF00672 HAMP domain INQ48_RS00630 PF00211 Adenylate and Guanylate cyclase catalytic domain INQ48_RS00630 PF02743 Cache domain INQ48_RS00635 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA INQ48_RS00655 PF03466 LysR substrate binding domain INQ48_RS00655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS00660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS00660 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS00665 PF02515 CoA-transferase family III INQ48_RS00670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS00680 PF03466 LysR substrate binding domain INQ48_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00690 PF01546 Peptidase family M20/M25/M40 INQ48_RS00690 PF07687 Peptidase dimerisation domain INQ48_RS00695 PF03315 Serine dehydratase beta chain INQ48_RS00695 PF03313 Serine dehydratase alpha chain INQ48_RS00700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS00705 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS00710 PF03466 LysR substrate binding domain INQ48_RS00710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00720 PF03167 Uracil DNA glycosylase superfamily INQ48_RS00725 PF01042 Endoribonuclease L-PSP INQ48_RS00740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00740 PF03466 LysR substrate binding domain INQ48_RS00755 PF00092 von Willebrand factor type A domain INQ48_RS00760 PF08406 CbbQ/NirQ/NorQ C-terminal INQ48_RS00760 PF07728 AAA domain (dynein-related subfamily) INQ48_RS00765 PF00795 Carbon-nitrogen hydrolase INQ48_RS00770 PF00005 ABC transporter INQ48_RS00775 PF00005 ABC transporter INQ48_RS00780 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS00785 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS00790 PF13458 Periplasmic binding protein INQ48_RS00815 PF04960 Glutaminase INQ48_RS00825 PF00893 Small Multidrug Resistance protein INQ48_RS00835 PF01613 Flavin reductase like domain INQ48_RS00840 PF03466 LysR substrate binding domain INQ48_RS00840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00845 PF14863 Alkyl sulfatase dimerisation INQ48_RS00845 PF00753 Metallo-beta-lactamase superfamily INQ48_RS00845 PF14864 Alkyl sulfatase C-terminal INQ48_RS00855 PF12833 Helix-turn-helix domain INQ48_RS00855 PF12852 Cupin INQ48_RS00865 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS00870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS00870 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS00870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS00875 PF02515 CoA-transferase family III INQ48_RS00885 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain INQ48_RS00885 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain INQ48_RS00890 PF02515 CoA-transferase family III INQ48_RS00895 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS00905 PF07670 Nucleoside recognition INQ48_RS00910 PF13091 PLD-like domain INQ48_RS00915 PF00563 EAL domain INQ48_RS00915 PF13426 PAS domain INQ48_RS00915 PF08448 PAS fold INQ48_RS00915 PF05231 MASE1 INQ48_RS00915 PF08447 PAS fold INQ48_RS00915 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS00920 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS00925 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV INQ48_RS00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS00940 PF03466 LysR substrate binding domain INQ48_RS00950 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain INQ48_RS00950 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain INQ48_RS00960 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS00960 PF13291 ACT domain INQ48_RS00965 PF01434 Peptidase family M41 INQ48_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS00965 PF17862 AAA+ lid domain INQ48_RS00975 PF01156 Inosine-uridine preferring nucleoside hydrolase INQ48_RS00980 PF00270 DEAD/DEAH box helicase INQ48_RS00980 PF09382 RQC domain INQ48_RS00980 PF16124 RecQ zinc-binding INQ48_RS00980 PF00570 HRDC domain INQ48_RS00980 PF00271 Helicase conserved C-terminal domain INQ48_RS00990 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS00995 PF00005 ABC transporter INQ48_RS01000 PF07702 UTRA domain INQ48_RS01000 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS01005 PF00221 Aromatic amino acid lyase INQ48_RS01010 PF01175 Urocanase Rossmann-like domain INQ48_RS01010 PF17392 Urocanase C-terminal domain INQ48_RS01010 PF17391 Urocanase N-terminal domain INQ48_RS01015 PF05962 HutD INQ48_RS01020 PF01979 Amidohydrolase family INQ48_RS01035 PF01565 FAD binding domain INQ48_RS01035 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS01040 PF00155 Aminotransferase class I and II INQ48_RS01050 PF02574 Homocysteine S-methyltransferase INQ48_RS01050 PF02965 Vitamin B12 dependent methionine synthase, activation domain INQ48_RS01050 PF02607 B12 binding domain INQ48_RS01050 PF02310 B12 binding domain INQ48_RS01050 PF00809 Pterin binding enzyme INQ48_RS01055 PF03466 LysR substrate binding domain INQ48_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01065 PF02607 B12 binding domain INQ48_RS01065 PF00809 Pterin binding enzyme INQ48_RS01065 PF02574 Homocysteine S-methyltransferase INQ48_RS01065 PF02310 B12 binding domain INQ48_RS01065 PF02965 Vitamin B12 dependent methionine synthase, activation domain INQ48_RS01085 PF01979 Amidohydrolase family INQ48_RS01090 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS01090 PF17938 Tetracyclin repressor-like, C-terminal domain INQ48_RS01095 PF00970 Oxidoreductase FAD-binding domain INQ48_RS01095 PF00175 Oxidoreductase NAD-binding domain INQ48_RS01100 PF00037 4Fe-4S binding domain INQ48_RS01120 PF13458 Periplasmic binding protein INQ48_RS01130 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS01130 PF00005 ABC transporter INQ48_RS01135 PF00005 ABC transporter INQ48_RS01140 PF00857 Isochorismatase family INQ48_RS01150 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS01150 PF01799 [2Fe-2S] binding domain INQ48_RS01155 PF00034 Cytochrome c INQ48_RS01155 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS01155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS01170 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 INQ48_RS01175 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath INQ48_RS01190 PF04965 Gene 25-like lysozyme INQ48_RS01195 PF05947 Type VI secretion system, TssF INQ48_RS01205 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS01205 PF17871 AAA lid domain INQ48_RS01205 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS01205 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS01210 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS01210 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS01260 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE INQ48_RS01265 PF00691 OmpA family INQ48_RS01265 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ48_RS01270 PF06761 Intracellular multiplication and human macrophage-killing INQ48_RS01270 PF14331 ImcF-related N-terminal domain INQ48_RS01270 PF06744 Type VI secretion protein IcmF C-terminal INQ48_RS01280 PF00069 Protein kinase domain INQ48_RS01280 PF13360 PQQ-like domain INQ48_RS01285 PF13335 Magnesium chelatase, subunit ChlI C-terminal INQ48_RS01285 PF01078 Magnesium chelatase, subunit ChlI INQ48_RS01295 PF00543 Nitrogen regulatory protein P-II INQ48_RS01300 PF00909 Ammonium Transporter Family INQ48_RS01305 PF08450 SMP-30/Gluconolactonase/LRE-like region INQ48_RS01310 PF03466 LysR substrate binding domain INQ48_RS01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01315 PF01565 FAD binding domain INQ48_RS01315 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS01320 PF01565 FAD binding domain INQ48_RS01330 PF02754 Cysteine-rich domain INQ48_RS01330 PF13183 4Fe-4S dicluster domain INQ48_RS01345 PF00255 Glutathione peroxidase INQ48_RS01355 PF07690 Major Facilitator Superfamily INQ48_RS01360 PF00842 Alanine racemase, C-terminal domain INQ48_RS01360 PF01168 Alanine racemase, N-terminal domain INQ48_RS01370 PF03466 LysR substrate binding domain INQ48_RS01370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01375 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS01375 PF00501 AMP-binding enzyme INQ48_RS01380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS01380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS01380 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS01385 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01390 PF03466 LysR substrate binding domain INQ48_RS01405 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS01405 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS01410 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS01415 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01420 PF00920 Dehydratase family INQ48_RS01430 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS01435 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS01455 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01460 PF00171 Aldehyde dehydrogenase family INQ48_RS01465 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01470 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS01475 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS01480 PF01047 MarR family INQ48_RS01485 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01490 PF01494 FAD binding domain INQ48_RS01495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01495 PF03466 LysR substrate binding domain INQ48_RS01500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01500 PF03466 LysR substrate binding domain INQ48_RS01505 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS01510 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS01515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS01520 PF18073 Rubredoxin metal binding domain INQ48_RS01535 PF03466 LysR substrate binding domain INQ48_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01540 PF17763 Glutaminase/Asparaginase C-terminal domain INQ48_RS01540 PF00710 Asparaginase, N-terminal INQ48_RS01545 PF07690 Major Facilitator Superfamily INQ48_RS01550 PF01546 Peptidase family M20/M25/M40 INQ48_RS01550 PF07687 Peptidase dimerisation domain INQ48_RS01555 PF04381 Putative exonuclease, RdgC INQ48_RS01560 PF01063 Amino-transferase class IV INQ48_RS01575 PF00107 Zinc-binding dehydrogenase INQ48_RS01575 PF16884 N-terminal domain of oxidoreductase INQ48_RS01580 PF16925 Tetracyclin repressor-like, C-terminal domain INQ48_RS01580 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS01590 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS01590 PF00672 HAMP domain INQ48_RS01595 PF00072 Response regulator receiver domain INQ48_RS01595 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS01600 PF01266 FAD dependent oxidoreductase INQ48_RS01610 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS01610 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS01615 PF07690 Major Facilitator Superfamily INQ48_RS01620 PF01435 Peptidase family M48 INQ48_RS01625 PF01425 Amidase INQ48_RS01635 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS01640 PF00005 ABC transporter INQ48_RS01650 PF01425 Amidase INQ48_RS01660 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS01670 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS01675 PF00795 Carbon-nitrogen hydrolase INQ48_RS01680 PF00857 Isochorismatase family INQ48_RS01685 PF00005 ABC transporter INQ48_RS01690 PF00857 Isochorismatase family INQ48_RS01695 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS01695 PF07729 FCD domain INQ48_RS01700 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01705 PF01494 FAD binding domain INQ48_RS01710 PF03466 LysR substrate binding domain INQ48_RS01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS01715 PF03466 LysR substrate binding domain INQ48_RS01720 PF00857 Isochorismatase family INQ48_RS01730 PF00106 short chain dehydrogenase INQ48_RS01735 PF01979 Amidohydrolase family INQ48_RS01740 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) INQ48_RS01745 PF00005 ABC transporter INQ48_RS01770 PF03372 Endonuclease/Exonuclease/phosphatase family INQ48_RS01775 PF00156 Phosphoribosyl transferase domain INQ48_RS01785 PF02637 GatB domain INQ48_RS01785 PF02934 GatB/GatE catalytic domain INQ48_RS01790 PF01425 Amidase INQ48_RS01795 PF02686 Glu-tRNAGln amidotransferase C subunit INQ48_RS01820 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS01820 PF03717 Penicillin-binding Protein dimerisation domain INQ48_RS01825 PF13407 Periplasmic binding protein domain INQ48_RS01830 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS01835 PF00005 ABC transporter INQ48_RS01840 PF01325 Iron dependent repressor, N-terminal DNA binding domain INQ48_RS01840 PF00480 ROK family INQ48_RS01845 PF01011 PQQ enzyme repeat INQ48_RS01850 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01860 PF00694 Aconitase C-terminal domain INQ48_RS01865 PF00330 Aconitase family (aconitate hydratase) INQ48_RS01880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS01880 PF13360 PQQ-like domain INQ48_RS01895 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS01900 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS01900 PF00114 Pilin (bacterial filament) INQ48_RS01905 PF00171 Aldehyde dehydrogenase family INQ48_RS01910 PF01965 DJ-1/PfpI family INQ48_RS01915 PF00285 Citrate synthase, C-terminal domain INQ48_RS01920 PF00285 Citrate synthase, C-terminal domain INQ48_RS01930 PF00501 AMP-binding enzyme INQ48_RS01930 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS01935 PF00005 ABC transporter INQ48_RS01955 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS01955 PF00005 ABC transporter INQ48_RS01960 PF00501 AMP-binding enzyme INQ48_RS01965 PF13545 Crp-like helix-turn-helix domain INQ48_RS01965 PF00027 Cyclic nucleotide-binding domain INQ48_RS01975 PF00158 Sigma-54 interaction domain INQ48_RS01975 PF02954 Bacterial regulatory protein, Fis family INQ48_RS01975 PF00072 Response regulator receiver domain INQ48_RS01980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS01980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS01985 PF07519 Tannase and feruloyl esterase INQ48_RS01990 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS01990 PF00005 ABC transporter INQ48_RS01995 PF00005 ABC transporter INQ48_RS01995 PF09383 NIL domain INQ48_RS02005 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS02020 PF00106 short chain dehydrogenase INQ48_RS02035 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS02040 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS02050 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS02055 PF00005 ABC transporter INQ48_RS02060 PF01546 Peptidase family M20/M25/M40 INQ48_RS02060 PF07687 Peptidase dimerisation domain INQ48_RS02075 PF00491 Arginase family INQ48_RS02080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ48_RS02080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ48_RS02090 PF02321 Outer membrane efflux protein INQ48_RS02095 PF00873 AcrB/AcrD/AcrF family INQ48_RS02100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS02115 PF00753 Metallo-beta-lactamase superfamily INQ48_RS02125 PF00034 Cytochrome c INQ48_RS02130 PF00174 Oxidoreductase molybdopterin binding domain INQ48_RS02135 PF00034 Cytochrome c INQ48_RS02160 PF02872 5'-nucleotidase, C-terminal domain INQ48_RS02160 PF00149 Calcineurin-like phosphoesterase INQ48_RS02165 PF04143 Sulphur transport INQ48_RS02190 PF13492 GAF domain INQ48_RS02190 PF13493 Domain of unknown function (DUF4118) INQ48_RS02190 PF02702 Osmosensitive K+ channel His kinase sensor domain INQ48_RS02190 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS02195 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS02195 PF00072 Response regulator receiver domain INQ48_RS02200 PF03144 Elongation factor Tu domain 2 INQ48_RS02200 PF03764 Elongation factor G, domain IV INQ48_RS02200 PF14492 Elongation Factor G, domain II INQ48_RS02200 PF00009 Elongation factor Tu GTP binding domain INQ48_RS02200 PF00679 Elongation factor G C-terminus INQ48_RS02220 PF04101 Glycosyltransferase family 28 C-terminal domain INQ48_RS02220 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase INQ48_RS02225 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family INQ48_RS02230 PF01467 Cytidylyltransferase-like INQ48_RS02230 PF00293 NUDIX domain INQ48_RS02235 PF00849 RNA pseudouridylate synthase INQ48_RS02235 PF01479 S4 domain INQ48_RS02245 PF00072 Response regulator receiver domain INQ48_RS02245 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS02250 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS02250 PF08521 Two-component sensor kinase N-terminal INQ48_RS02265 PF00230 Major intrinsic protein INQ48_RS02270 PF08659 KR domain INQ48_RS02270 PF00698 Acyl transferase domain INQ48_RS02270 PF14765 Polyketide synthase dehydratase INQ48_RS02270 PF00550 Phosphopantetheine attachment site INQ48_RS02270 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS02275 PF03466 LysR substrate binding domain INQ48_RS02315 PF00183 Hsp90 protein INQ48_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS02325 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS02355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ48_RS02355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ48_RS02355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ48_RS02360 PF02515 CoA-transferase family III INQ48_RS02365 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS02370 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS02370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS02370 PF18158 Adaptive response protein AidB N-terminal domain INQ48_RS02375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS02375 PF03466 LysR substrate binding domain INQ48_RS02390 PF01636 Phosphotransferase enzyme family INQ48_RS02400 PF02566 OsmC-like protein INQ48_RS02405 PF01047 MarR family INQ48_RS02410 PF00144 Beta-lactamase INQ48_RS02420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS02420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS02425 PF02222 ATP-grasp domain INQ48_RS02430 PF07859 alpha/beta hydrolase fold INQ48_RS02440 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS02450 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS02450 PF00005 ABC transporter INQ48_RS02455 PF00005 ABC transporter INQ48_RS02460 PF00501 AMP-binding enzyme INQ48_RS02475 PF01914 MarC family integral membrane protein INQ48_RS02485 PF01323 DSBA-like thioredoxin domain INQ48_RS02490 PF01738 Dienelactone hydrolase family INQ48_RS02495 PF03466 LysR substrate binding domain INQ48_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS02510 PF01544 CorA-like Mg2+ transporter protein INQ48_RS02515 PF00490 Delta-aminolevulinic acid dehydratase INQ48_RS02520 PF03653 Uncharacterised protein family (UPF0093) INQ48_RS02535 PF02129 X-Pro dipeptidyl-peptidase (S15 family) INQ48_RS02540 PF07943 Penicillin-binding protein 5, C-terminal domain INQ48_RS02540 PF00768 D-alanyl-D-alanine carboxypeptidase INQ48_RS02545 PF00164 Ribosomal protein S12/S23 INQ48_RS02550 PF00177 Ribosomal protein S7p/S5e INQ48_RS02555 PF00679 Elongation factor G C-terminus INQ48_RS02555 PF14492 Elongation Factor G, domain II INQ48_RS02555 PF03764 Elongation factor G, domain IV INQ48_RS02555 PF00009 Elongation factor Tu GTP binding domain INQ48_RS02555 PF03144 Elongation factor Tu domain 2 INQ48_RS02560 PF03144 Elongation factor Tu domain 2 INQ48_RS02560 PF03143 Elongation factor Tu C-terminal domain INQ48_RS02560 PF00009 Elongation factor Tu GTP binding domain INQ48_RS02565 PF00338 Ribosomal protein S10p/S20e INQ48_RS02580 PF00297 Ribosomal protein L3 INQ48_RS02585 PF00573 Ribosomal protein L4/L1 family INQ48_RS02590 PF00276 Ribosomal protein L23 INQ48_RS02595 PF00181 Ribosomal Proteins L2, RNA binding domain INQ48_RS02595 PF03947 Ribosomal Proteins L2, C-terminal domain INQ48_RS02600 PF00203 Ribosomal protein S19 INQ48_RS02605 PF00237 Ribosomal protein L22p/L17e INQ48_RS02610 PF00189 Ribosomal protein S3, C-terminal domain INQ48_RS02610 PF07650 KH domain INQ48_RS02615 PF00252 Ribosomal protein L16p/L10e INQ48_RS02620 PF00831 Ribosomal L29 protein INQ48_RS02625 PF00366 Ribosomal protein S17 INQ48_RS02630 PF08534 Redoxin INQ48_RS02645 PF01322 Cytochrome C' INQ48_RS02650 PF00578 AhpC/TSA family INQ48_RS02660 PF07690 Major Facilitator Superfamily INQ48_RS02670 PF00381 PTS HPr component phosphorylation site INQ48_RS02675 PF05524 PEP-utilising enzyme, N-terminal INQ48_RS02675 PF02896 PEP-utilising enzyme, TIM barrel domain INQ48_RS02675 PF00391 PEP-utilising enzyme, mobile domain INQ48_RS02700 PF00072 Response regulator receiver domain INQ48_RS02700 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS02705 PF00672 HAMP domain INQ48_RS02705 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS02710 PF16884 N-terminal domain of oxidoreductase INQ48_RS02710 PF00107 Zinc-binding dehydrogenase INQ48_RS02715 PF00419 Fimbrial protein INQ48_RS02720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ48_RS02720 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ48_RS02725 PF13954 PapC N-terminal domain INQ48_RS02725 PF00577 Outer membrane usher protein INQ48_RS02725 PF13953 PapC C-terminal domain INQ48_RS02730 PF00419 Fimbrial protein INQ48_RS02740 PF03600 Citrate transporter INQ48_RS02745 PF07690 Major Facilitator Superfamily INQ48_RS02755 PF00158 Sigma-54 interaction domain INQ48_RS02755 PF00072 Response regulator receiver domain INQ48_RS02755 PF02954 Bacterial regulatory protein, Fis family INQ48_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS02760 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS02765 PF00501 AMP-binding enzyme INQ48_RS02765 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS02770 PF04055 Radical SAM superfamily INQ48_RS02770 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family INQ48_RS02775 PF03099 Biotin/lipoate A/B protein ligase family INQ48_RS02780 PF12706 Beta-lactamase superfamily domain INQ48_RS02785 PF04359 Protein of unknown function (DUF493) INQ48_RS02790 PF01063 Amino-transferase class IV INQ48_RS02800 PF00119 ATP synthase A chain INQ48_RS02805 PF00137 ATP synthase subunit C INQ48_RS02810 PF00430 ATP synthase B/B' CF(0) INQ48_RS02815 PF00213 ATP synthase delta (OSCP) subunit INQ48_RS02820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ48_RS02820 PF00306 ATP synthase alpha/beta chain, C terminal domain INQ48_RS02820 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ48_RS02825 PF00231 ATP synthase INQ48_RS02835 PF02874 ATP synthase alpha/beta family, beta-barrel domain INQ48_RS02835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ48_RS02840 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain INQ48_RS02840 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain INQ48_RS02845 PF00480 ROK family INQ48_RS02845 PF01047 MarR family INQ48_RS02850 PF00005 ABC transporter INQ48_RS02855 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS02860 PF13407 Periplasmic binding protein domain INQ48_RS02865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ48_RS02865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ48_RS02880 PF01068 ATP dependent DNA ligase domain INQ48_RS02880 PF04675 DNA ligase N terminus INQ48_RS02880 PF04679 ATP dependent DNA ligase C terminal region INQ48_RS02885 PF04679 ATP dependent DNA ligase C terminal region INQ48_RS02885 PF01068 ATP dependent DNA ligase domain INQ48_RS02885 PF04675 DNA ligase N terminus INQ48_RS02890 PF08494 DEAD/H associated INQ48_RS02890 PF00271 Helicase conserved C-terminal domain INQ48_RS02890 PF00270 DEAD/DEAH box helicase INQ48_RS02895 PF00085 Thioredoxin INQ48_RS02930 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS02940 PF00005 ABC transporter INQ48_RS02945 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS02955 PF03171 2OG-Fe(II) oxygenase superfamily INQ48_RS02955 PF14226 non-haem dioxygenase in morphine synthesis N-terminal INQ48_RS02960 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS02960 PF08362 YcdC-like protein, C-terminal region INQ48_RS02965 PF01613 Flavin reductase like domain INQ48_RS02970 PF00881 Nitroreductase family INQ48_RS02975 PF00561 alpha/beta hydrolase fold INQ48_RS02980 PF01042 Endoribonuclease L-PSP INQ48_RS02985 PF00857 Isochorismatase family INQ48_RS02990 PF00296 Luciferase-like monooxygenase INQ48_RS03015 PF02321 Outer membrane efflux protein INQ48_RS03020 PF00873 AcrB/AcrD/AcrF family INQ48_RS03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS03025 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS03030 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS03030 PF08361 MAATS-type transcriptional repressor, C-terminal region INQ48_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS03040 PF00672 HAMP domain INQ48_RS03040 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS03045 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS03045 PF00072 Response regulator receiver domain INQ48_RS03070 PF03466 LysR substrate binding domain INQ48_RS03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03075 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family INQ48_RS03085 PF17831 Pyruvate dehydrogenase E1 component middle domain INQ48_RS03085 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS03090 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INQ48_RS03090 PF02779 Transketolase, pyrimidine binding domain INQ48_RS03090 PF02780 Transketolase, C-terminal domain INQ48_RS03095 PF07730 Histidine kinase INQ48_RS03100 PF00005 ABC transporter INQ48_RS03105 PF02361 Cobalt transport protein INQ48_RS03135 PF00296 Luciferase-like monooxygenase INQ48_RS03150 PF00072 Response regulator receiver domain INQ48_RS03150 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS03155 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INQ48_RS03155 PF05222 Alanine dehydrogenase/PNT, N-terminal domain INQ48_RS03160 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch INQ48_RS03165 PF02233 NAD(P) transhydrogenase beta subunit INQ48_RS03170 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS03170 PF00501 AMP-binding enzyme INQ48_RS03175 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS03180 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS03180 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS03185 PF00005 ABC transporter INQ48_RS03185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS03190 PF00005 ABC transporter INQ48_RS03190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS03195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS03200 PF01048 Phosphorylase superfamily INQ48_RS03205 PF01544 CorA-like Mg2+ transporter protein INQ48_RS03210 PF13361 UvrD-like helicase C-terminal domain INQ48_RS03210 PF00580 UvrD/REP helicase N-terminal domain INQ48_RS03215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein INQ48_RS03220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 INQ48_RS03225 PF07475 HPr Serine kinase C-terminal domain INQ48_RS03225 PF02603 HPr Serine kinase N terminus INQ48_RS03230 PF01475 Ferric uptake regulator family INQ48_RS03235 PF04355 SmpA / OmlA family INQ48_RS03240 PF05173 Dihydrodipicolinate reductase, C-terminus INQ48_RS03240 PF01113 Dihydrodipicolinate reductase, N-terminus INQ48_RS03245 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS03250 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS03255 PF00343 Carbohydrate phosphorylase INQ48_RS03260 PF00534 Glycosyl transferases group 1 INQ48_RS03260 PF08323 Starch synthase catalytic domain INQ48_RS03265 PF00483 Nucleotidyl transferase INQ48_RS03270 PF18390 Glycogen debranching enzyme C-terminal domain INQ48_RS03270 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS03270 PF00128 Alpha amylase, catalytic domain INQ48_RS03275 PF02806 Alpha amylase, C-terminal all-beta domain INQ48_RS03275 PF00128 Alpha amylase, catalytic domain INQ48_RS03275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS03280 PF00128 Alpha amylase, catalytic domain INQ48_RS03285 PF13454 FAD-NAD(P)-binding INQ48_RS03290 PF00133 tRNA synthetases class I (I, L, M and V) INQ48_RS03290 PF13603 Leucyl-tRNA synthetase, Domain 2 INQ48_RS03290 PF08264 Anticodon-binding domain of tRNA INQ48_RS03290 PF09334 tRNA synthetases class I (M) INQ48_RS03305 PF00171 Aldehyde dehydrogenase family INQ48_RS03315 PF02705 K+ potassium transporter INQ48_RS03325 PF03594 Benzoate membrane transport protein INQ48_RS03330 PF02951 Prokaryotic glutathione synthetase, N-terminal domain INQ48_RS03330 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain INQ48_RS03335 PF00593 TonB dependent receptor INQ48_RS03335 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS03340 PF13230 Glutamine amidotransferases class-II INQ48_RS03350 PF07690 Major Facilitator Superfamily INQ48_RS03355 PF15887 Putative zinc-binding metallo-peptidase INQ48_RS03355 PF10005 zinc-ribbon domain INQ48_RS03365 PF00365 Phosphofructokinase INQ48_RS03370 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS03380 PF03466 LysR substrate binding domain INQ48_RS03380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03385 PF02469 Fasciclin domain INQ48_RS03405 PF01274 Malate synthase INQ48_RS03410 PF00155 Aminotransferase class I and II INQ48_RS03415 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS03420 PF09339 IclR helix-turn-helix domain INQ48_RS03420 PF01614 Bacterial transcriptional regulator INQ48_RS03425 PF00682 HMGL-like INQ48_RS03430 PF02515 CoA-transferase family III INQ48_RS03435 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS03440 PF03466 LysR substrate binding domain INQ48_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03460 PF00750 tRNA synthetases class I (R) INQ48_RS03460 PF03485 Arginyl tRNA synthetase N terminal domain INQ48_RS03460 PF05746 DALR anticodon binding domain INQ48_RS03470 PF01323 DSBA-like thioredoxin domain INQ48_RS03470 PF00085 Thioredoxin INQ48_RS03475 PF03968 OstA-like protein INQ48_RS03480 PF00005 ABC transporter INQ48_RS03485 PF04552 Sigma-54, DNA binding domain INQ48_RS03485 PF00309 Sigma-54 factor, Activator interacting domain (AID) INQ48_RS03485 PF04963 Sigma-54 factor, core binding domain INQ48_RS03490 PF13091 PLD-like domain INQ48_RS03495 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03500 PF03466 LysR substrate binding domain INQ48_RS03510 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS03515 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS03520 PF01070 FMN-dependent dehydrogenase INQ48_RS03525 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS03555 PF00072 Response regulator receiver domain INQ48_RS03555 PF09308 LuxQ, periplasmic INQ48_RS03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS03555 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS03560 PF02926 THUMP domain INQ48_RS03560 PF01170 Putative RNA methylase family UPF0020 INQ48_RS03575 PF01645 Conserved region in glutamate synthase INQ48_RS03580 PF02810 SEC-C motif INQ48_RS03580 PF03695 Uncharacterised protein family (UPF0149) INQ48_RS03600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03600 PF03466 LysR substrate binding domain INQ48_RS03610 PF02464 Competence-damaged protein INQ48_RS03615 PF04608 Phosphatidylglycerophosphatase A INQ48_RS03625 PF01494 FAD binding domain INQ48_RS03630 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03635 PF03466 LysR substrate binding domain INQ48_RS03640 PF02769 AIR synthase related protein, C-terminal domain INQ48_RS03640 PF00586 AIR synthase related protein, N-terminal domain INQ48_RS03655 PF04107 Glutamate-cysteine ligase family 2(GCS2) INQ48_RS03670 PF04379 ApaG domain INQ48_RS03685 PF00834 Ribulose-phosphate 3 epimerase family INQ48_RS03700 PF04679 ATP dependent DNA ligase C terminal region INQ48_RS03700 PF13298 DNA polymerase Ligase (LigD) INQ48_RS03700 PF01068 ATP dependent DNA ligase domain INQ48_RS03720 PF01070 FMN-dependent dehydrogenase INQ48_RS03725 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS03735 PF00005 ABC transporter INQ48_RS03735 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS03740 PF00005 ABC transporter INQ48_RS03745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ48_RS03745 PF13378 Enolase C-terminal domain-like INQ48_RS03750 PF03466 LysR substrate binding domain INQ48_RS03750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03765 PF00199 Catalase INQ48_RS03765 PF06628 Catalase-related immune-responsive INQ48_RS03765 PF18011 C-terminal domain found in long catalases INQ48_RS03770 PF03466 LysR substrate binding domain INQ48_RS03770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS03775 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS03780 PF04909 Amidohydrolase INQ48_RS03795 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS03800 PF13609 Gram-negative porin INQ48_RS03810 PF08479 POTRA domain, ShlB-type INQ48_RS03810 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB INQ48_RS03825 PF00535 Glycosyl transferase family 2 INQ48_RS03825 PF02709 N-terminal domain of galactosyltransferase INQ48_RS03835 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS03835 PF00672 HAMP domain INQ48_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS03845 PF00072 Response regulator receiver domain INQ48_RS03845 PF01627 Hpt domain INQ48_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS03845 PF00672 HAMP domain INQ48_RS03845 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS03860 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS03860 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) INQ48_RS03860 PF13296 Putative type VI secretion system Rhs element Vgr INQ48_RS03865 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE INQ48_RS03870 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ48_RS03870 PF00691 OmpA family INQ48_RS03875 PF06761 Intracellular multiplication and human macrophage-killing INQ48_RS03875 PF06744 Type VI secretion protein IcmF C-terminal INQ48_RS03875 PF14331 ImcF-related N-terminal domain INQ48_RS03885 PF00069 Protein kinase domain INQ48_RS03915 PF07024 ImpE protein INQ48_RS03920 PF04965 Gene 25-like lysozyme INQ48_RS03925 PF05947 Type VI secretion system, TssF INQ48_RS03935 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS03935 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS03935 PF17871 AAA lid domain INQ48_RS03935 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS03940 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS03940 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS03980 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath INQ48_RS03985 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 INQ48_RS03990 PF06812 ImpA, N-terminal, type VI secretion system INQ48_RS04010 PF00072 Response regulator receiver domain INQ48_RS04010 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS04020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS04020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS04020 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS04025 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain INQ48_RS04025 PF08608 Wyosine base formation INQ48_RS04040 PF01039 Carboxyl transferase domain INQ48_RS04045 PF02785 Biotin carboxylase C-terminal domain INQ48_RS04045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS04045 PF00364 Biotin-requiring enzyme INQ48_RS04045 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS04050 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS04055 PF03466 LysR substrate binding domain INQ48_RS04060 PF02423 Ornithine cyclodeaminase/mu-crystallin family INQ48_RS04065 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS04075 PF04715 Anthranilate synthase component I, N terminal region INQ48_RS04075 PF00425 chorismate binding enzyme INQ48_RS04085 PF00117 Glutamine amidotransferase class-I INQ48_RS04090 PF01212 Beta-eliminating lyase INQ48_RS04095 PF01810 LysE type translocator INQ48_RS04100 PF00591 Glycosyl transferase family, a/b domain INQ48_RS04100 PF02885 Glycosyl transferase family, helical bundle domain INQ48_RS04105 PF00218 Indole-3-glycerol phosphate synthase INQ48_RS04110 PF03167 Uracil DNA glycosylase superfamily INQ48_RS04130 PF03143 Elongation factor Tu C-terminal domain INQ48_RS04130 PF03144 Elongation factor Tu domain 2 INQ48_RS04130 PF00009 Elongation factor Tu GTP binding domain INQ48_RS04145 PF00467 KOW motif INQ48_RS04145 PF02357 Transcription termination factor nusG INQ48_RS04150 PF00298 Ribosomal protein L11, RNA binding domain INQ48_RS04150 PF03946 Ribosomal protein L11, N-terminal domain INQ48_RS04155 PF00687 Ribosomal protein L1p/L10e family INQ48_RS04160 PF00466 Ribosomal protein L10 INQ48_RS04165 PF00542 Ribosomal protein L7/L12 C-terminal domain INQ48_RS04165 PF16320 Ribosomal protein L7/L12 dimerisation domain INQ48_RS04170 PF04565 RNA polymerase Rpb2, domain 3 INQ48_RS04170 PF04561 RNA polymerase Rpb2, domain 2 INQ48_RS04170 PF10385 RNA polymerase beta subunit external 1 domain INQ48_RS04170 PF04560 RNA polymerase Rpb2, domain 7 INQ48_RS04170 PF04563 RNA polymerase beta subunit INQ48_RS04170 PF00562 RNA polymerase Rpb2, domain 6 INQ48_RS04175 PF04983 RNA polymerase Rpb1, domain 3 INQ48_RS04175 PF04997 RNA polymerase Rpb1, domain 1 INQ48_RS04175 PF00623 RNA polymerase Rpb1, domain 2 INQ48_RS04175 PF04998 RNA polymerase Rpb1, domain 5 INQ48_RS04175 PF05000 RNA polymerase Rpb1, domain 4 INQ48_RS04185 PF01029 NusB family INQ48_RS04185 PF01189 16S rRNA methyltransferase RsmB/F INQ48_RS04195 PF00672 HAMP domain INQ48_RS04195 PF00989 PAS fold INQ48_RS04195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS04195 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS04200 PF00072 Response regulator receiver domain INQ48_RS04200 PF02954 Bacterial regulatory protein, Fis family INQ48_RS04200 PF00158 Sigma-54 interaction domain INQ48_RS04225 PF00561 alpha/beta hydrolase fold INQ48_RS04230 PF01047 MarR family INQ48_RS04250 PF02446 4-alpha-glucanotransferase INQ48_RS04255 PF11941 Domain of unknown function (DUF3459) INQ48_RS04255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS04255 PF00128 Alpha amylase, catalytic domain INQ48_RS04260 PF00128 Alpha amylase, catalytic domain INQ48_RS04260 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS04270 PF00128 Alpha amylase, catalytic domain INQ48_RS04270 PF16657 Maltogenic Amylase, C-terminal domain INQ48_RS04275 PF11896 Domain of unknown function (DUF3416) INQ48_RS04275 PF00128 Alpha amylase, catalytic domain INQ48_RS04280 PF02806 Alpha amylase, C-terminal all-beta domain INQ48_RS04280 PF00128 Alpha amylase, catalytic domain INQ48_RS04280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS04285 PF00989 PAS fold INQ48_RS04285 PF00072 Response regulator receiver domain INQ48_RS04285 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS04285 PF01627 Hpt domain INQ48_RS04285 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS04290 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS04290 PF00072 Response regulator receiver domain INQ48_RS04295 PF01925 Sulfite exporter TauE/SafE INQ48_RS04300 PF12833 Helix-turn-helix domain INQ48_RS04300 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term INQ48_RS04325 PF12833 Helix-turn-helix domain INQ48_RS04330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS04330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS04335 PF02447 GntP family permease INQ48_RS04340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ48_RS04340 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS04350 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS04355 PF12833 Helix-turn-helix domain INQ48_RS04360 PF02540 NAD synthase INQ48_RS04365 PF02253 Phospholipase A1 INQ48_RS04375 PF00580 UvrD/REP helicase N-terminal domain INQ48_RS04375 PF13361 UvrD-like helicase C-terminal domain INQ48_RS04380 PF03547 Membrane transport protein INQ48_RS04395 PF18074 Primosomal protein N C-terminal domain INQ48_RS04395 PF17764 3′ DNA-binding domain (3′BD) INQ48_RS04395 PF18319 PriA DNA helicase Cys-rich region (CRR) domain INQ48_RS04395 PF00271 Helicase conserved C-terminal domain INQ48_RS04395 PF00270 DEAD/DEAH box helicase INQ48_RS04400 PF01208 Uroporphyrinogen decarboxylase (URO-D) INQ48_RS04405 PF07690 Major Facilitator Superfamily INQ48_RS04410 PF00578 AhpC/TSA family INQ48_RS04415 PF11412 Disulphide bond corrector protein DsbC INQ48_RS04415 PF02683 Cytochrome C biogenesis protein transmembrane region INQ48_RS04415 PF13098 Thioredoxin-like domain INQ48_RS04420 PF01411 tRNA synthetases class II (A) INQ48_RS04420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ48_RS04420 PF02272 DHHA1 domain INQ48_RS04425 PF07995 Glucose / Sorbosone dehydrogenase INQ48_RS04430 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS04450 PF13302 Acetyltransferase (GNAT) domain INQ48_RS04460 PF00107 Zinc-binding dehydrogenase INQ48_RS04460 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS04465 PF03466 LysR substrate binding domain INQ48_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS04470 PF00106 short chain dehydrogenase INQ48_RS04475 PF02633 Creatinine amidohydrolase INQ48_RS04480 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS04485 PF01810 LysE type translocator INQ48_RS04495 PF02567 Phenazine biosynthesis-like protein INQ48_RS04500 PF13417 Glutathione S-transferase, N-terminal domain INQ48_RS04500 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS04505 PF02567 Phenazine biosynthesis-like protein INQ48_RS04510 PF01810 LysE type translocator INQ48_RS04515 PF00155 Aminotransferase class I and II INQ48_RS04520 PF00892 EamA-like transporter family INQ48_RS04530 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS04545 PF01266 FAD dependent oxidoreductase INQ48_RS04550 PF16363 GDP-mannose 4,6 dehydratase INQ48_RS04555 PF04321 RmlD substrate binding domain INQ48_RS04560 PF00483 Nucleotidyl transferase INQ48_RS04565 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase INQ48_RS04575 PF05523 WxcM-like, C-terminal INQ48_RS04580 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ48_RS04585 PF00535 Glycosyl transferase family 2 INQ48_RS04595 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ48_RS04600 PF08889 WbqC-like protein family INQ48_RS04625 PF00535 Glycosyl transferase family 2 INQ48_RS04645 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS04650 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS04650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 INQ48_RS04655 PF00005 ABC transporter INQ48_RS04660 PF01061 ABC-2 type transporter INQ48_RS04665 PF00535 Glycosyl transferase family 2 INQ48_RS04670 PF00535 Glycosyl transferase family 2 INQ48_RS04675 PF01757 Acyltransferase family INQ48_RS04685 PF00953 Glycosyl transferase family 4 INQ48_RS04690 PF00696 Amino acid kinase family INQ48_RS04695 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS04700 PF00199 Catalase INQ48_RS04700 PF06628 Catalase-related immune-responsive INQ48_RS04705 PF02615 Malate/L-lactate dehydrogenase INQ48_RS04715 PF08666 SAF domain INQ48_RS04715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ48_RS04720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS04730 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS04735 PF07729 FCD domain INQ48_RS04735 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS04750 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS04755 PF07702 UTRA domain INQ48_RS04755 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS04760 PF13458 Periplasmic binding protein INQ48_RS04765 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS04770 PF11862 Domain of unknown function (DUF3382) INQ48_RS04770 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS04775 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS04775 PF00005 ABC transporter INQ48_RS04780 PF00005 ABC transporter INQ48_RS04785 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS04790 PF00330 Aconitase family (aconitate hydratase) INQ48_RS04795 PF00694 Aconitase C-terminal domain INQ48_RS04805 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS04810 PF02538 Hydantoinase B/oxoprolinase INQ48_RS04815 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS04815 PF01968 Hydantoinase/oxoprolinase INQ48_RS04825 PF01494 FAD binding domain INQ48_RS04835 PF03466 LysR substrate binding domain INQ48_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS04840 PF00106 short chain dehydrogenase INQ48_RS04850 PF12806 Acetyl-CoA dehydrogenase C-terminal like INQ48_RS04850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS04850 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS04850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS04860 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS04860 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS04860 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS04865 PF04480 Protein of unknown function (DUF559) INQ48_RS04870 PF02803 Thiolase, C-terminal domain INQ48_RS04870 PF00108 Thiolase, N-terminal domain INQ48_RS04885 PF01323 DSBA-like thioredoxin domain INQ48_RS04890 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS04895 PF13458 Periplasmic binding protein INQ48_RS04900 PF03061 Thioesterase superfamily INQ48_RS04905 PF00005 ABC transporter INQ48_RS04905 PF00664 ABC transporter transmembrane region INQ48_RS04910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS04910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS04915 PF01425 Amidase INQ48_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS04920 PF03466 LysR substrate binding domain INQ48_RS04925 PF10415 Fumarase C C-terminus INQ48_RS04925 PF00206 Lyase INQ48_RS04930 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS04935 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS04945 PF00005 ABC transporter INQ48_RS04955 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS04955 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS04960 PF01638 HxlR-like helix-turn-helix INQ48_RS04965 PF01156 Inosine-uridine preferring nucleoside hydrolase INQ48_RS04975 PF01965 DJ-1/PfpI family INQ48_RS04980 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS04985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS04985 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS04990 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS05000 PF00580 UvrD/REP helicase N-terminal domain INQ48_RS05000 PF13361 UvrD-like helicase C-terminal domain INQ48_RS05010 PF03060 Nitronate monooxygenase INQ48_RS05015 PF01012 Electron transfer flavoprotein domain INQ48_RS05015 PF00766 Electron transfer flavoprotein FAD-binding domain INQ48_RS05020 PF01012 Electron transfer flavoprotein domain INQ48_RS05025 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05030 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS05030 PF00501 AMP-binding enzyme INQ48_RS05035 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05040 PF02515 CoA-transferase family III INQ48_RS05045 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS05050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS05050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS05050 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS05055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS05055 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS05055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS05060 PF02803 Thiolase, C-terminal domain INQ48_RS05060 PF00108 Thiolase, N-terminal domain INQ48_RS05065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS05065 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS05065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05070 PF03466 LysR substrate binding domain INQ48_RS05075 PF07702 UTRA domain INQ48_RS05075 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS05080 PF00330 Aconitase family (aconitate hydratase) INQ48_RS05085 PF00694 Aconitase C-terminal domain INQ48_RS05090 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05100 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05105 PF04909 Amidohydrolase INQ48_RS05110 PF03737 Aldolase/RraA INQ48_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS05125 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS05130 PF01979 Amidohydrolase family INQ48_RS05145 PF01435 Peptidase family M48 INQ48_RS05155 PF01613 Flavin reductase like domain INQ48_RS05170 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS05175 PF03595 Voltage-dependent anion channel INQ48_RS05190 PF12833 Helix-turn-helix domain INQ48_RS05190 PF02311 AraC-like ligand binding domain INQ48_RS05200 PF01047 MarR family INQ48_RS05210 PF07869 Protein of unknown function (DUF1656) INQ48_RS05215 PF13533 Biotin-lipoyl like INQ48_RS05220 PF02321 Outer membrane efflux protein INQ48_RS05225 PF07690 Major Facilitator Superfamily INQ48_RS05235 PF00849 RNA pseudouridylate synthase INQ48_RS05235 PF01479 S4 domain INQ48_RS05240 PF00753 Metallo-beta-lactamase superfamily INQ48_RS05240 PF16123 Hydroxyacylglutathione hydrolase C-terminus INQ48_RS05245 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05250 PF03466 LysR substrate binding domain INQ48_RS05250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05255 PF00962 Adenosine/AMP deaminase INQ48_RS05260 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS05265 PF06906 Protein of unknown function (DUF1272) INQ48_RS05285 PF00474 Sodium:solute symporter family INQ48_RS05290 PF01979 Amidohydrolase family INQ48_RS05295 PF07690 Major Facilitator Superfamily INQ48_RS05300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ48_RS05315 PF01361 Tautomerase enzyme INQ48_RS05325 PF03466 LysR substrate binding domain INQ48_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05340 PF01636 Phosphotransferase enzyme family INQ48_RS05345 PF01042 Endoribonuclease L-PSP INQ48_RS05360 PF00248 Aldo/keto reductase family INQ48_RS05365 PF07690 Major Facilitator Superfamily INQ48_RS05385 PF01323 DSBA-like thioredoxin domain INQ48_RS05390 PF03466 LysR substrate binding domain INQ48_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05395 PF17954 Quercetinase C-terminal cupin domain INQ48_RS05395 PF02678 Pirin INQ48_RS05400 PF00857 Isochorismatase family INQ48_RS05410 PF07969 Amidohydrolase family INQ48_RS05420 PF07690 Major Facilitator Superfamily INQ48_RS05425 PF00561 alpha/beta hydrolase fold INQ48_RS05430 PF01678 Diaminopimelate epimerase INQ48_RS05445 PF02899 Phage integrase, N-terminal SAM-like domain INQ48_RS05445 PF00589 Phage integrase family INQ48_RS05450 PF10672 S-adenosylmethionine-dependent methyltransferase INQ48_RS05450 PF17785 PUA-like domain INQ48_RS05455 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ48_RS05455 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS05465 PF01258 Prokaryotic dksA/traR C4-type zinc finger INQ48_RS05475 PF00227 Proteasome subunit INQ48_RS05480 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS05480 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS05485 PF02381 MraZ protein, putative antitoxin-like INQ48_RS05490 PF01795 MraW methylase family INQ48_RS05500 PF03717 Penicillin-binding Protein dimerisation domain INQ48_RS05500 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS05505 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS05505 PF08245 Mur ligase middle domain INQ48_RS05510 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS05510 PF01225 Mur ligase family, catalytic domain INQ48_RS05510 PF08245 Mur ligase middle domain INQ48_RS05515 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 INQ48_RS05515 PF00953 Glycosyl transferase family 4 INQ48_RS05520 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS05520 PF08245 Mur ligase middle domain INQ48_RS05525 PF01098 Cell cycle protein INQ48_RS05530 PF04101 Glycosyltransferase family 28 C-terminal domain INQ48_RS05530 PF03033 Glycosyltransferase family 28 N-terminal domain INQ48_RS05535 PF01225 Mur ligase family, catalytic domain INQ48_RS05535 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS05535 PF08245 Mur ligase middle domain INQ48_RS05540 PF07478 D-ala D-ala ligase C-terminus INQ48_RS05540 PF01820 D-ala D-ala ligase N-terminus INQ48_RS05545 PF08478 POTRA domain, FtsQ-type INQ48_RS05545 PF03799 Cell division protein FtsQ INQ48_RS05550 PF02491 SHS2 domain inserted in FTSA INQ48_RS05555 PF00091 Tubulin/FtsZ family, GTPase domain INQ48_RS05555 PF12327 FtsZ family, C-terminal domain INQ48_RS05560 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase INQ48_RS05570 PF01757 Acyltransferase family INQ48_RS05575 PF02075 Crossover junction endodeoxyribonuclease RuvC INQ48_RS05595 PF00912 Transglycosylase INQ48_RS05600 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS05600 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS05600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS05610 PF08206 Ribonuclease B OB domain INQ48_RS05610 PF00575 S1 RNA binding domain INQ48_RS05610 PF17876 Cold shock domain INQ48_RS05610 PF00773 RNB domain INQ48_RS05615 PF05728 Uncharacterised protein family (UPF0227) INQ48_RS05620 PF00072 Response regulator receiver domain INQ48_RS05620 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS05630 PF01098 Cell cycle protein INQ48_RS05635 PF01523 Putative modulator of DNA gyrase INQ48_RS05645 PF00793 DAHP synthetase I family INQ48_RS05660 PF01225 Mur ligase family, catalytic domain INQ48_RS05660 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS05660 PF08245 Mur ligase middle domain INQ48_RS05670 PF00578 AhpC/TSA family INQ48_RS05675 PF00364 Biotin-requiring enzyme INQ48_RS05680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS05680 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS05680 PF02785 Biotin carboxylase C-terminal domain INQ48_RS05695 PF00294 pfkB family carbohydrate kinase INQ48_RS05705 PF00268 Ribonucleotide reductase, small chain INQ48_RS05710 PF00317 Ribonucleotide reductase, all-alpha domain INQ48_RS05710 PF02867 Ribonucleotide reductase, barrel domain INQ48_RS05710 PF03477 ATP cone domain INQ48_RS05715 PF01510 N-acetylmuramoyl-L-alanine amidase INQ48_RS05720 PF00158 Sigma-54 interaction domain INQ48_RS05720 PF00072 Response regulator receiver domain INQ48_RS05720 PF02954 Bacterial regulatory protein, Fis family INQ48_RS05725 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS05725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS05735 PF01578 Cytochrome C assembly protein INQ48_RS05740 PF02881 SRP54-type protein, helical bundle domain INQ48_RS05740 PF02978 Signal peptide binding domain INQ48_RS05740 PF00448 SRP54-type protein, GTPase domain INQ48_RS05755 PF00535 Glycosyl transferase family 2 INQ48_RS05765 PF00072 Response regulator receiver domain INQ48_RS05765 PF00158 Sigma-54 interaction domain INQ48_RS05775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS05775 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS05780 PF00919 Uncharacterized protein family UPF0004 INQ48_RS05780 PF04055 Radical SAM superfamily INQ48_RS05780 PF01938 TRAM domain INQ48_RS05790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS05790 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS05795 PF00873 AcrB/AcrD/AcrF family INQ48_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05800 PF03466 LysR substrate binding domain INQ48_RS05805 PF03746 LamB/YcsF family INQ48_RS05810 PF00364 Biotin-requiring enzyme INQ48_RS05815 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS05815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS05815 PF02785 Biotin carboxylase C-terminal domain INQ48_RS05825 PF02626 Carboxyltransferase domain, subdomain A and B INQ48_RS05830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ48_RS05835 PF00005 ABC transporter INQ48_RS05840 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS05845 PF00300 Histidine phosphatase superfamily (branch 1) INQ48_RS05855 PF01171 PP-loop family INQ48_RS05875 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS05885 PF00005 ABC transporter INQ48_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS05895 PF17263 Family of unknown function (DUF5329) INQ48_RS05900 PF00459 Inositol monophosphatase family INQ48_RS05910 PF00480 ROK family INQ48_RS05920 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS05920 PF00155 Aminotransferase class I and II INQ48_RS05930 PF00982 Glycosyltransferase family 20 INQ48_RS05935 PF00723 Glycosyl hydrolases family 15 INQ48_RS05940 PF02358 Trehalose-phosphatase INQ48_RS05945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS05945 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS05950 PF01966 HD domain INQ48_RS05950 PF01743 Poly A polymerase head domain INQ48_RS05950 PF12627 Probable RNA and SrmB- binding site of polymerase A INQ48_RS05955 PF03922 OmpW family INQ48_RS05960 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS05960 PF13417 Glutathione S-transferase, N-terminal domain INQ48_RS05965 PF02308 MgtC family INQ48_RS05970 PF14718 Soluble lytic murein transglycosylase L domain INQ48_RS05970 PF01464 Transglycosylase SLT domain INQ48_RS05975 PF01812 5-formyltetrahydrofolate cyclo-ligase family INQ48_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS05980 PF03466 LysR substrate binding domain INQ48_RS05995 PF00027 Cyclic nucleotide-binding domain INQ48_RS05995 PF13545 Crp-like helix-turn-helix domain INQ48_RS06005 PF12804 MobA-like NTP transferase domain INQ48_RS06005 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS06010 PF01037 Lrp/AsnC ligand binding domain INQ48_RS06015 PF01380 SIS domain INQ48_RS06040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS06045 PF00892 EamA-like transporter family INQ48_RS06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06050 PF03466 LysR substrate binding domain INQ48_RS06055 PF01225 Mur ligase family, catalytic domain INQ48_RS06055 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS06055 PF08245 Mur ligase middle domain INQ48_RS06065 PF01263 Aldose 1-epimerase INQ48_RS06080 PF08450 SMP-30/Gluconolactonase/LRE-like region INQ48_RS06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06090 PF03466 LysR substrate binding domain INQ48_RS06095 PF00171 Aldehyde dehydrogenase family INQ48_RS06100 PF13407 Periplasmic binding protein domain INQ48_RS06105 PF13407 Periplasmic binding protein domain INQ48_RS06110 PF00005 ABC transporter INQ48_RS06115 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS06120 PF00005 ABC transporter INQ48_RS06125 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS06130 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS06135 PF00920 Dehydratase family INQ48_RS06140 PF00701 Dihydrodipicolinate synthetase family INQ48_RS06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06160 PF00005 ABC transporter INQ48_RS06165 PF00005 ABC transporter INQ48_RS06165 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS06170 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS06175 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS06180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS06180 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INQ48_RS06185 PF00171 Aldehyde dehydrogenase family INQ48_RS06190 PF01425 Amidase INQ48_RS06195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS06200 PF00005 ABC transporter INQ48_RS06200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS06205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS06205 PF00005 ABC transporter INQ48_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06210 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS06215 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06220 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS06240 PF08245 Mur ligase middle domain INQ48_RS06240 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS06240 PF08443 RimK-like ATP-grasp domain INQ48_RS06245 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS06245 PF08245 Mur ligase middle domain INQ48_RS06245 PF08443 RimK-like ATP-grasp domain INQ48_RS06250 PF00664 ABC transporter transmembrane region INQ48_RS06250 PF00005 ABC transporter INQ48_RS06265 PF06508 Queuosine biosynthesis protein QueC INQ48_RS06270 PF06472 ABC transporter transmembrane region 2 INQ48_RS06270 PF00005 ABC transporter INQ48_RS06275 PF01966 HD domain INQ48_RS06285 PF08402 TOBE domain INQ48_RS06285 PF00005 ABC transporter INQ48_RS06290 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06295 PF05430 S-adenosyl-L-methionine-dependent methyltransferase INQ48_RS06295 PF01266 FAD dependent oxidoreductase INQ48_RS06300 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS06305 PF07690 Major Facilitator Superfamily INQ48_RS06310 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS06310 PF07729 FCD domain INQ48_RS06315 PF09084 NMT1/THI5 like INQ48_RS06320 PF00005 ABC transporter INQ48_RS06325 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06330 PF00282 Pyridoxal-dependent decarboxylase conserved domain INQ48_RS06335 PF01979 Amidohydrolase family INQ48_RS06340 PF00860 Permease family INQ48_RS06345 PF03466 LysR substrate binding domain INQ48_RS06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06350 PF04185 Phosphoesterase family INQ48_RS06350 PF05506 Domain of unknown function (DUF756) INQ48_RS06360 PF05506 Domain of unknown function (DUF756) INQ48_RS06360 PF04185 Phosphoesterase family INQ48_RS06365 PF04185 Phosphoesterase family INQ48_RS06365 PF05506 Domain of unknown function (DUF756) INQ48_RS06390 PF00482 Type II secretion system (T2SS), protein F INQ48_RS06395 PF00437 Type II/IV secretion system protein INQ48_RS06400 PF03958 Bacterial type II/III secretion system short domain INQ48_RS06400 PF00263 Bacterial type II and III secretion system protein INQ48_RS06425 PF11612 Type II secretion system (T2SS), protein J INQ48_RS06425 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS06430 PF02501 Type II secretion system (T2SS), protein I INQ48_RS06430 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS06440 PF08334 Type II secretion system (T2SS), protein G INQ48_RS06440 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS06450 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS06450 PF00585 C-terminal regulatory domain of Threonine dehydratase INQ48_RS06460 PF13609 Gram-negative porin INQ48_RS06465 PF02566 OsmC-like protein INQ48_RS06470 PF03232 Ubiquinone biosynthesis protein COQ7 INQ48_RS06475 PF13609 Gram-negative porin INQ48_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06485 PF01546 Peptidase family M20/M25/M40 INQ48_RS06485 PF07687 Peptidase dimerisation domain INQ48_RS06495 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06495 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS06500 PF00005 ABC transporter INQ48_RS06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS06505 PF00005 ABC transporter INQ48_RS06505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS06510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INQ48_RS06515 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain INQ48_RS06515 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain INQ48_RS06525 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06530 PF08402 TOBE domain INQ48_RS06530 PF00005 ABC transporter INQ48_RS06540 PF08212 Lipocalin-like domain INQ48_RS06545 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ48_RS06550 PF00342 Phosphoglucose isomerase INQ48_RS06560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ48_RS06565 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS06570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06570 PF03466 LysR substrate binding domain INQ48_RS06580 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06585 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06590 PF03459 TOBE domain INQ48_RS06590 PF00005 ABC transporter INQ48_RS06590 PF17912 MalK OB fold domain INQ48_RS06595 PF08125 Mannitol dehydrogenase C-terminal domain INQ48_RS06595 PF01232 Mannitol dehydrogenase Rossmann domain INQ48_RS06605 PF00923 Transaldolase/Fructose-6-phosphate aldolase INQ48_RS06610 PF00294 pfkB family carbohydrate kinase INQ48_RS06615 PF12833 Helix-turn-helix domain INQ48_RS06620 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS06620 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS06630 PF13404 AsnC-type helix-turn-helix domain INQ48_RS06630 PF01037 Lrp/AsnC ligand binding domain INQ48_RS06635 PF00118 TCP-1/cpn60 chaperonin family INQ48_RS06640 PF00166 Chaperonin 10 Kd subunit INQ48_RS06645 PF01022 Bacterial regulatory protein, arsR family INQ48_RS06650 PF02040 Arsenical pump membrane protein INQ48_RS06655 PF03960 ArsC family INQ48_RS06660 PF03358 NADPH-dependent FMN reductase INQ48_RS06665 PF03466 LysR substrate binding domain INQ48_RS06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS06670 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS06685 PF01699 Sodium/calcium exchanger protein INQ48_RS06690 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS06700 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS06700 PF00072 Response regulator receiver domain INQ48_RS06705 PF00072 Response regulator receiver domain INQ48_RS06705 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS06710 PF00419 Fimbrial protein INQ48_RS06715 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ48_RS06715 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ48_RS06720 PF13953 PapC C-terminal domain INQ48_RS06720 PF13954 PapC N-terminal domain INQ48_RS06720 PF00577 Outer membrane usher protein INQ48_RS06725 PF00419 Fimbrial protein INQ48_RS06730 PF00419 Fimbrial protein INQ48_RS06735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ48_RS06735 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ48_RS06740 PF13953 PapC C-terminal domain INQ48_RS06740 PF00577 Outer membrane usher protein INQ48_RS06740 PF13954 PapC N-terminal domain INQ48_RS06750 PF13091 PLD-like domain INQ48_RS06755 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS06755 PF00593 TonB dependent receptor INQ48_RS06770 PF00593 TonB dependent receptor INQ48_RS06770 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS06780 PF00005 ABC transporter INQ48_RS06790 PF00072 Response regulator receiver domain INQ48_RS06790 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS06795 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS06795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS06800 PF00438 S-adenosylmethionine synthetase, N-terminal domain INQ48_RS06800 PF02773 S-adenosylmethionine synthetase, C-terminal domain INQ48_RS06800 PF02772 S-adenosylmethionine synthetase, central domain INQ48_RS06810 PF03279 Bacterial lipid A biosynthesis acyltransferase INQ48_RS06815 PF00561 alpha/beta hydrolase fold INQ48_RS06820 PF01926 50S ribosome-binding GTPase INQ48_RS06825 PF00034 Cytochrome c INQ48_RS06830 PF05140 ResB-like family INQ48_RS06835 PF01578 Cytochrome C assembly protein INQ48_RS06840 PF00174 Oxidoreductase molybdopterin binding domain INQ48_RS06845 PF01794 Ferric reductase like transmembrane component INQ48_RS06850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain INQ48_RS06850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain INQ48_RS06860 PF01491 Frataxin-like domain INQ48_RS06865 PF00912 Transglycosylase INQ48_RS06865 PF17092 Penicillin-binding protein OB-like domain INQ48_RS06865 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS06870 PF11104 Type IV pilus assembly protein PilM; INQ48_RS06875 PF05137 Fimbrial assembly protein (PilN) INQ48_RS06885 PF04351 Pilus assembly protein, PilP INQ48_RS06890 PF07660 Secretin and TonB N terminus short domain INQ48_RS06890 PF03958 Bacterial type II/III secretion system short domain INQ48_RS06890 PF00263 Bacterial type II and III secretion system protein INQ48_RS06890 PF11741 AMIN domain INQ48_RS06895 PF01202 Shikimate kinase INQ48_RS06900 PF01761 3-dehydroquinate synthase INQ48_RS06905 PF13286 Phosphohydrolase-associated domain INQ48_RS06905 PF01966 HD domain INQ48_RS06935 PF04898 Glutamate synthase central domain INQ48_RS06935 PF00310 Glutamine amidotransferases class-II INQ48_RS06935 PF01493 GXGXG motif INQ48_RS06935 PF01645 Conserved region in glutamate synthase INQ48_RS06940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster INQ48_RS06940 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS06945 PF00005 ABC transporter INQ48_RS06950 PF02405 Permease MlaE INQ48_RS06955 PF02470 MlaD protein INQ48_RS06960 PF04333 MlaA lipoprotein INQ48_RS06980 PF00005 ABC transporter INQ48_RS06985 PF01061 ABC-2 type transporter INQ48_RS06990 PF01722 BolA-like protein INQ48_RS06995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ48_RS07000 PF01634 ATP phosphoribosyltransferase INQ48_RS07005 PF00815 Histidinol dehydrogenase INQ48_RS07020 PF00155 Aminotransferase class I and II INQ48_RS07025 PF00475 Imidazoleglycerol-phosphate dehydratase INQ48_RS07030 PF00117 Glutamine amidotransferase class-I INQ48_RS07035 PF00977 Histidine biosynthesis protein INQ48_RS07050 PF00375 Sodium:dicarboxylate symporter family INQ48_RS07060 PF00977 Histidine biosynthesis protein INQ48_RS07065 PF01502 Phosphoribosyl-AMP cyclohydrolase INQ48_RS07070 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase INQ48_RS07080 PF01230 HIT domain INQ48_RS07085 PF02416 mttA/Hcf106 family INQ48_RS07090 PF02416 mttA/Hcf106 family INQ48_RS07095 PF00902 Sec-independent protein translocase protein (TatC) INQ48_RS07100 PF17820 PDZ domain INQ48_RS07100 PF13180 PDZ domain INQ48_RS07105 PF01784 NIF3 (NGG1p interacting factor 3) INQ48_RS07110 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ48_RS07115 PF01741 Large-conductance mechanosensitive channel, MscL INQ48_RS07120 PF02563 Polysaccharide biosynthesis/export protein INQ48_RS07120 PF10531 SLBB domain INQ48_RS07125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain INQ48_RS07125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain INQ48_RS07125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain INQ48_RS07130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ48_RS07130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ48_RS07135 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS07140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ48_RS07175 PF08485 Polysaccharide biosynthesis protein C-terminal INQ48_RS07175 PF02719 Polysaccharide biosynthesis protein INQ48_RS07180 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS07185 PF02350 UDP-N-acetylglucosamine 2-epimerase INQ48_RS07195 PF02397 Bacterial sugar transferase INQ48_RS07200 PF14602 Hexapeptide repeat of succinyl-transferase INQ48_RS07200 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS07200 PF17836 PglD N-terminal domain INQ48_RS07205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family INQ48_RS07210 PF01451 Low molecular weight phosphotyrosine protein phosphatase INQ48_RS07215 PF02706 Chain length determinant protein INQ48_RS07215 PF13807 G-rich domain on putative tyrosine kinase INQ48_RS07215 PF13614 AAA domain INQ48_RS07220 PF02719 Polysaccharide biosynthesis protein INQ48_RS07225 PF06082 Exopolysaccharide biosynthesis protein YbjH INQ48_RS07240 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS07240 PF00072 Response regulator receiver domain INQ48_RS07245 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal INQ48_RS07245 PF00355 Rieske [2Fe-2S] domain INQ48_RS07250 PF00032 Cytochrome b(C-terminal)/b6/petD INQ48_RS07250 PF00033 Cytochrome b/b6/petB INQ48_RS07255 PF02167 Cytochrome C1 family INQ48_RS07260 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS07260 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS07265 PF04386 Stringent starvation protein B INQ48_RS07280 PF01757 Acyltransferase family INQ48_RS07300 PF05762 VWA domain containing CoxE-like protein INQ48_RS07310 PF07728 AAA domain (dynein-related subfamily) INQ48_RS07315 PF13569 Domain of unknown function (DUF4132) INQ48_RS07320 PF13569 Domain of unknown function (DUF4132) INQ48_RS07325 PF00106 short chain dehydrogenase INQ48_RS07330 PF17768 RecJ OB domain INQ48_RS07330 PF01368 DHH family INQ48_RS07330 PF02272 DHHA1 domain INQ48_RS07340 PF12704 MacB-like periplasmic core domain INQ48_RS07340 PF02687 FtsX-like permease family INQ48_RS07345 PF00005 ABC transporter INQ48_RS07350 PF12680 SnoaL-like domain INQ48_RS07350 PF08281 Sigma-70, region 4 INQ48_RS07350 PF04542 Sigma-70 region 2 INQ48_RS07355 PF00574 Clp protease INQ48_RS07360 PF01042 Endoribonuclease L-PSP INQ48_RS07370 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS07375 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS07375 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS07380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS07380 PF00005 ABC transporter INQ48_RS07385 PF00005 ABC transporter INQ48_RS07385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS07395 PF01418 Helix-turn-helix domain, rpiR family INQ48_RS07395 PF01380 SIS domain INQ48_RS07400 PF07969 Amidohydrolase family INQ48_RS07405 PF03741 Integral membrane protein TerC family INQ48_RS07405 PF03471 Transporter associated domain INQ48_RS07410 PF01613 Flavin reductase like domain INQ48_RS07435 PF00171 Aldehyde dehydrogenase family INQ48_RS07435 PF01575 MaoC like domain INQ48_RS07440 PF00005 ABC transporter INQ48_RS07445 PF00005 ABC transporter INQ48_RS07445 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS07460 PF00175 Oxidoreductase NAD-binding domain INQ48_RS07460 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS07460 PF00970 Oxidoreductase FAD-binding domain INQ48_RS07465 PF01883 Iron-sulfur cluster assembly protein INQ48_RS07470 PF05138 Phenylacetic acid catabolic protein INQ48_RS07475 PF06243 Phenylacetic acid degradation B INQ48_RS07480 PF05138 Phenylacetic acid catabolic protein INQ48_RS07485 PF01804 Penicillin amidase INQ48_RS07490 PF14535 AMP-binding enzyme C-terminal domain INQ48_RS07490 PF00501 AMP-binding enzyme INQ48_RS07495 PF03061 Thioesterase superfamily INQ48_RS07500 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS07505 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS07510 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS07515 PF00106 short chain dehydrogenase INQ48_RS07525 PF07584 Aerotolerance regulator N-terminal INQ48_RS07525 PF13519 von Willebrand factor type A domain INQ48_RS07530 PF01882 Protein of unknown function DUF58 INQ48_RS07535 PF07726 ATPase family associated with various cellular activities (AAA) INQ48_RS07535 PF17863 AAA lid domain INQ48_RS07540 PF00595 PDZ domain INQ48_RS07545 PF01026 TatD related DNase INQ48_RS07565 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INQ48_RS07565 PF00437 Type II/IV secretion system protein INQ48_RS07575 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS07580 PF03466 LysR substrate binding domain INQ48_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS07585 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS07600 PF00106 short chain dehydrogenase INQ48_RS07615 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS07615 PF00107 Zinc-binding dehydrogenase INQ48_RS07625 PF13593 SBF-like CPA transporter family (DUF4137) INQ48_RS07630 PF02690 Na+/Pi-cotransporter INQ48_RS07635 PF00149 Calcineurin-like phosphoesterase INQ48_RS07640 PF17850 CysA C-terminal regulatory domain INQ48_RS07640 PF00005 ABC transporter INQ48_RS07640 PF12857 TOBE-like domain INQ48_RS07645 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS07650 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS07660 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS07665 PF01252 Signal peptidase (SPase) II INQ48_RS07670 PF06827 Zinc finger found in FPG and IleRS INQ48_RS07670 PF00133 tRNA synthetases class I (I, L, M and V) INQ48_RS07670 PF08264 Anticodon-binding domain of tRNA INQ48_RS07675 PF06574 FAD synthetase INQ48_RS07675 PF01687 Riboflavin kinase INQ48_RS07685 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS07695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS07695 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS07695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS07700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS07700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS07700 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS07705 PF00551 Formyl transferase INQ48_RS07725 PF01189 16S rRNA methyltransferase RsmB/F INQ48_RS07725 PF01029 NusB family INQ48_RS07735 PF00471 Ribosomal protein L33 INQ48_RS07740 PF00830 Ribosomal L28 family INQ48_RS07745 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS07750 PF13545 Crp-like helix-turn-helix domain INQ48_RS07750 PF00027 Cyclic nucleotide-binding domain INQ48_RS07755 PF09397 Ftsk gamma domain INQ48_RS07755 PF17854 FtsK alpha domain INQ48_RS07755 PF01580 FtsK/SpoIIIE family INQ48_RS07755 PF13491 4TM region of DNA translocase FtsK/SpoIIIE INQ48_RS07760 PF03548 Outer membrane lipoprotein carrier protein LolA INQ48_RS07765 PF16193 AAA C-terminal domain INQ48_RS07765 PF12002 MgsA AAA+ ATPase C terminal INQ48_RS07765 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS07770 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS07775 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS07775 PF11862 Domain of unknown function (DUF3382) INQ48_RS07780 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS07780 PF00005 ABC transporter INQ48_RS07785 PF00005 ABC transporter INQ48_RS07790 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS07795 PF00970 Oxidoreductase FAD-binding domain INQ48_RS07795 PF00175 Oxidoreductase NAD-binding domain INQ48_RS07795 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS07805 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS07805 PF07660 Secretin and TonB N terminus short domain INQ48_RS07805 PF00593 TonB dependent receptor INQ48_RS07825 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS07830 PF09297 NADH pyrophosphatase zinc ribbon domain INQ48_RS07830 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain INQ48_RS07830 PF00293 NUDIX domain INQ48_RS07835 PF01206 Sulfurtransferase TusA INQ48_RS07840 PF00483 Nucleotidyl transferase INQ48_RS07845 PF08264 Anticodon-binding domain of tRNA INQ48_RS07845 PF10458 Valyl tRNA synthetase tRNA binding arm INQ48_RS07845 PF00133 tRNA synthetases class I (I, L, M and V) INQ48_RS07850 PF03883 Peroxide stress protein YaaA INQ48_RS07860 PF00561 alpha/beta hydrolase fold INQ48_RS07865 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term INQ48_RS07865 PF14489 QueF-like protein INQ48_RS07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS07875 PF03466 LysR substrate binding domain INQ48_RS07880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ48_RS07880 PF13378 Enolase C-terminal domain-like INQ48_RS07885 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS07890 PF17645 Arylmalonate decarboxylase INQ48_RS07920 PF00817 impB/mucB/samB family INQ48_RS07920 PF11798 IMS family HHH motif INQ48_RS07920 PF11799 impB/mucB/samB family C-terminal domain INQ48_RS07950 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS07955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS07955 PF03466 LysR substrate binding domain INQ48_RS07960 PF07519 Tannase and feruloyl esterase INQ48_RS07970 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS07975 PF00083 Sugar (and other) transporter INQ48_RS07980 PF01070 FMN-dependent dehydrogenase INQ48_RS07985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS07985 PF03466 LysR substrate binding domain INQ48_RS07990 PF02652 L-lactate permease INQ48_RS08005 PF02560 Cyanate lyase C-terminal domain INQ48_RS08010 PF00106 short chain dehydrogenase INQ48_RS08015 PF00171 Aldehyde dehydrogenase family INQ48_RS08025 PF00072 Response regulator receiver domain INQ48_RS08025 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS08030 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS08030 PF00672 HAMP domain INQ48_RS08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS08045 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS08045 PF00072 Response regulator receiver domain INQ48_RS08050 PF07244 Surface antigen variable number repeat INQ48_RS08050 PF01103 Surface antigen INQ48_RS08060 PF13609 Gram-negative porin INQ48_RS08075 PF00563 EAL domain INQ48_RS08075 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS08075 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS08075 PF13188 PAS domain INQ48_RS08085 PF07690 Major Facilitator Superfamily INQ48_RS08090 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS08090 PF07729 FCD domain INQ48_RS08095 PF04536 TPM domain INQ48_RS08100 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS08100 PF00912 Transglycosylase INQ48_RS08110 PF01810 LysE type translocator INQ48_RS08125 PF01425 Amidase INQ48_RS08135 PF00083 Sugar (and other) transporter INQ48_RS08145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS08150 PF00144 Beta-lactamase INQ48_RS08165 PF00501 AMP-binding enzyme INQ48_RS08165 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS08170 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS08180 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS08225 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS08225 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS08240 PF04545 Sigma-70, region 4 INQ48_RS08240 PF04542 Sigma-70 region 2 INQ48_RS08260 PF02321 Outer membrane efflux protein INQ48_RS08265 PF00873 AcrB/AcrD/AcrF family INQ48_RS08270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS08270 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS08280 PF00206 Lyase INQ48_RS08280 PF14698 Argininosuccinate lyase C-terminal INQ48_RS08285 PF06580 Histidine kinase INQ48_RS08285 PF07694 5TMR of 5TMR-LYT INQ48_RS08290 PF04397 LytTr DNA-binding domain INQ48_RS08290 PF00072 Response regulator receiver domain INQ48_RS08295 PF01594 AI-2E family transporter INQ48_RS08310 PF03466 LysR substrate binding domain INQ48_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS08315 PF07690 Major Facilitator Superfamily INQ48_RS08325 PF00311 Phosphoenolpyruvate carboxylase INQ48_RS08330 PF03900 Porphobilinogen deaminase, C-terminal domain INQ48_RS08330 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain INQ48_RS08350 PF07690 Major Facilitator Superfamily INQ48_RS08355 PF03466 LysR substrate binding domain INQ48_RS08355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS08360 PF10150 Ribonuclease E/G family INQ48_RS08360 PF00575 S1 RNA binding domain INQ48_RS08360 PF12111 Polyribonucleotide phosphorylase C terminal INQ48_RS08365 PF00849 RNA pseudouridylate synthase INQ48_RS08365 PF01479 S4 domain INQ48_RS08370 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS08380 PF01343 Peptidase family S49 INQ48_RS08385 PF07690 Major Facilitator Superfamily INQ48_RS08390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ48_RS08395 PF02545 Maf-like protein INQ48_RS08400 PF02620 Large ribosomal RNA subunit accumulation protein YceD INQ48_RS08405 PF01783 Ribosomal L32p protein family INQ48_RS08410 PF02504 Fatty acid synthesis protein INQ48_RS08415 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal INQ48_RS08415 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III INQ48_RS08420 PF00698 Acyl transferase domain INQ48_RS08430 PF00550 Phosphopantetheine attachment site INQ48_RS08435 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS08435 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS08445 PF08281 Sigma-70, region 4 INQ48_RS08445 PF04542 Sigma-70 region 2 INQ48_RS08460 PF13180 PDZ domain INQ48_RS08465 PF06421 GTP-binding protein LepA C-terminus INQ48_RS08465 PF03144 Elongation factor Tu domain 2 INQ48_RS08465 PF00679 Elongation factor G C-terminus INQ48_RS08465 PF00009 Elongation factor Tu GTP binding domain INQ48_RS08470 PF10502 Signal peptidase, peptidase S26 INQ48_RS08480 PF14622 Ribonuclease-III-like INQ48_RS08480 PF00035 Double-stranded RNA binding motif INQ48_RS08485 PF07650 KH domain INQ48_RS08485 PF01926 50S ribosome-binding GTPase INQ48_RS08490 PF02565 Recombination protein O C terminal INQ48_RS08490 PF11967 Recombination protein O N terminal INQ48_RS08495 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ INQ48_RS08500 PF01648 4'-phosphopantetheinyl transferase superfamily INQ48_RS08505 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ48_RS08520 PF01863 Protein of unknown function DUF45 INQ48_RS08525 PF00012 Hsp70 protein INQ48_RS08530 PF01336 OB-fold nucleic acid binding domain INQ48_RS08530 PF00152 tRNA synthetases class II (D, K and N) INQ48_RS08540 PF02325 YGGT family INQ48_RS08545 PF01039 Carboxyl transferase domain INQ48_RS08545 PF17848 Acetyl-coA carboxylase zinc finger domain INQ48_RS08550 PF00290 Tryptophan synthase alpha chain INQ48_RS08555 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS08560 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase INQ48_RS08565 PF01416 tRNA pseudouridine synthase INQ48_RS08575 PF02774 Semialdehyde dehydrogenase, dimerisation domain INQ48_RS08575 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ48_RS08580 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS08585 PF00694 Aconitase C-terminal domain INQ48_RS08590 PF00330 Aconitase family (aconitate hydratase) INQ48_RS08595 PF03466 LysR substrate binding domain INQ48_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS08605 PF12951 Passenger-associated-transport-repeat INQ48_RS08610 PF00285 Citrate synthase, C-terminal domain INQ48_RS08615 PF03937 Flavinator of succinate dehydrogenase INQ48_RS08620 PF13085 2Fe-2S iron-sulfur cluster binding domain INQ48_RS08625 PF00890 FAD binding domain INQ48_RS08625 PF02910 Fumarate reductase flavoprotein C-term INQ48_RS08640 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS08640 PF07702 UTRA domain INQ48_RS08645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain INQ48_RS08645 PF00056 lactate/malate dehydrogenase, NAD binding domain INQ48_RS08665 PF00330 Aconitase family (aconitate hydratase) INQ48_RS08665 PF06434 Aconitate hydratase 2 N-terminus INQ48_RS08665 PF11791 Aconitate B N-terminal domain INQ48_RS08695 PF03895 YadA-like membrane anchor domain INQ48_RS08695 PF05658 Head domain of trimeric autotransporter adhesin INQ48_RS08695 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ48_RS08695 PF13018 Extended Signal Peptide of Type V secretion system INQ48_RS08715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS08715 PF09317 Domain of unknown function (DUF1974) INQ48_RS08715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS08730 PF00330 Aconitase family (aconitate hydratase) INQ48_RS08730 PF00694 Aconitase C-terminal domain INQ48_RS08740 PF03239 Iron permease FTR1 family INQ48_RS08745 PF09375 Imelysin INQ48_RS08745 PF13473 Cupredoxin-like domain INQ48_RS08750 PF04261 Dyp-type peroxidase family INQ48_RS08755 PF09375 Imelysin INQ48_RS08755 PF13473 Cupredoxin-like domain INQ48_RS08765 PF07670 Nucleoside recognition INQ48_RS08765 PF07664 Ferrous iron transport protein B C terminus INQ48_RS08765 PF02421 Ferrous iron transport protein B INQ48_RS08775 PF01494 FAD binding domain INQ48_RS08785 PF03301 Tryptophan 2,3-dioxygenase INQ48_RS08790 PF00266 Aminotransferase class-V INQ48_RS08795 PF04199 Putative cyclase INQ48_RS08800 PF01037 Lrp/AsnC ligand binding domain INQ48_RS08810 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ48_RS08810 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ48_RS08815 PF00202 Aminotransferase class-III INQ48_RS08825 PF01649 Ribosomal protein S20 INQ48_RS08830 PF03023 Lipid II flippase MurJ INQ48_RS08835 PF13369 Transglutaminase-like superfamily INQ48_RS08845 PF03795 YCII-related domain INQ48_RS08850 PF03795 YCII-related domain INQ48_RS08855 PF08281 Sigma-70, region 4 INQ48_RS08855 PF04542 Sigma-70 region 2 INQ48_RS08880 PF00586 AIR synthase related protein, N-terminal domain INQ48_RS08880 PF02769 AIR synthase related protein, C-terminal domain INQ48_RS08885 PF00308 Bacterial dnaA protein INQ48_RS08895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) INQ48_RS08900 PF01865 Protein of unknown function DUF47 INQ48_RS08905 PF01384 Phosphate transporter family INQ48_RS08910 PF13609 Gram-negative porin INQ48_RS08925 PF00886 Ribosomal protein S16 INQ48_RS08930 PF05239 PRC-barrel domain INQ48_RS08930 PF01782 RimM N-terminal domain INQ48_RS08935 PF01746 tRNA (Guanine-1)-methyltransferase INQ48_RS08940 PF01245 Ribosomal protein L19 INQ48_RS08945 PF00293 NUDIX domain INQ48_RS08950 PF17113 Regulatory signalling modulator protein AmpE INQ48_RS08950 PF03186 CobD/Cbib protein INQ48_RS08955 PF00155 Aminotransferase class I and II INQ48_RS08960 PF03193 RsgA GTPase INQ48_RS08965 PF01329 Pterin 4 alpha carbinolamine dehydratase INQ48_RS08970 PF01435 Peptidase family M48 INQ48_RS08975 PF00929 Exonuclease INQ48_RS08980 PF00270 DEAD/DEAH box helicase INQ48_RS08980 PF00271 Helicase conserved C-terminal domain INQ48_RS08990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS08990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS08990 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain INQ48_RS09000 PF00698 Acyl transferase domain INQ48_RS09000 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS09000 PF14765 Polyketide synthase dehydratase INQ48_RS09000 PF00107 Zinc-binding dehydrogenase INQ48_RS09000 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS09000 PF00550 Phosphopantetheine attachment site INQ48_RS09000 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS09000 PF08659 KR domain INQ48_RS09000 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS09020 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS09020 PF00175 Oxidoreductase NAD-binding domain INQ48_RS09025 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS09025 PF00355 Rieske [2Fe-2S] domain INQ48_RS09035 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS09035 PF00501 AMP-binding enzyme INQ48_RS09040 PF02803 Thiolase, C-terminal domain INQ48_RS09040 PF00108 Thiolase, N-terminal domain INQ48_RS09050 PF04199 Putative cyclase INQ48_RS09060 PF13458 Periplasmic binding protein INQ48_RS09065 PF13458 Periplasmic binding protein INQ48_RS09070 PF00355 Rieske [2Fe-2S] domain INQ48_RS09070 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS09085 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS09095 PF00005 ABC transporter INQ48_RS09100 PF00501 AMP-binding enzyme INQ48_RS09100 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS09105 PF00106 short chain dehydrogenase INQ48_RS09120 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS09120 PF00072 Response regulator receiver domain INQ48_RS09125 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS09130 PF05199 GMC oxidoreductase INQ48_RS09185 PF00106 short chain dehydrogenase INQ48_RS09195 PF07859 alpha/beta hydrolase fold INQ48_RS09200 PF00478 IMP dehydrogenase / GMP reductase domain INQ48_RS09205 PF13361 UvrD-like helicase C-terminal domain INQ48_RS09205 PF00580 UvrD/REP helicase N-terminal domain INQ48_RS09215 PF01636 Phosphotransferase enzyme family INQ48_RS09225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain INQ48_RS09225 PF00476 DNA polymerase family A INQ48_RS09225 PF01612 3'-5' exonuclease INQ48_RS09225 PF01367 5'-3' exonuclease, C-terminal SAM fold INQ48_RS09235 PF01546 Peptidase family M20/M25/M40 INQ48_RS09235 PF07687 Peptidase dimerisation domain INQ48_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS09240 PF03466 LysR substrate binding domain INQ48_RS09245 PF01266 FAD dependent oxidoreductase INQ48_RS09250 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS09260 PF01738 Dienelactone hydrolase family INQ48_RS09275 PF01425 Amidase INQ48_RS09280 PF00005 ABC transporter INQ48_RS09280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS09285 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09285 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS09290 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS09305 PF07969 Amidohydrolase family INQ48_RS09310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS09310 PF00005 ABC transporter INQ48_RS09315 PF00005 ABC transporter INQ48_RS09315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS09320 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09325 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS09335 PF07364 Metallopeptidase family M81 INQ48_RS09335 PF07171 MlrC C-terminus INQ48_RS09340 PF01266 FAD dependent oxidoreductase INQ48_RS09350 PF00034 Cytochrome c INQ48_RS09350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS09350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS09355 PF01799 [2Fe-2S] binding domain INQ48_RS09355 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS09360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS09360 PF00034 Cytochrome c INQ48_RS09360 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS09365 PF13676 TIR domain INQ48_RS09370 PF00082 Subtilase family INQ48_RS09375 PF01434 Peptidase family M41 INQ48_RS09375 PF06480 FtsH Extracellular INQ48_RS09375 PF17862 AAA+ lid domain INQ48_RS09375 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS09390 PF07687 Peptidase dimerisation domain INQ48_RS09390 PF01546 Peptidase family M20/M25/M40 INQ48_RS09395 PF11737 Protein of unknown function (DUF3300) INQ48_RS09410 PF00005 ABC transporter INQ48_RS09420 PF00581 Rhodanese-like domain INQ48_RS09435 PF02609 Exonuclease VII small subunit INQ48_RS09440 PF00348 Polyprenyl synthetase INQ48_RS09445 PF02779 Transketolase, pyrimidine binding domain INQ48_RS09445 PF02780 Transketolase, C-terminal domain INQ48_RS09445 PF13292 1-deoxy-D-xylulose-5-phosphate synthase INQ48_RS09450 PF00005 ABC transporter INQ48_RS09455 PF00005 ABC transporter INQ48_RS09455 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS09460 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS09460 PF11862 Domain of unknown function (DUF3382) INQ48_RS09465 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS09470 PF13458 Periplasmic binding protein INQ48_RS09475 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS09490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS09500 PF03781 Sulfatase-modifying factor enzyme 1 INQ48_RS09500 PF12867 DinB superfamily INQ48_RS09510 PF00083 Sugar (and other) transporter INQ48_RS09515 PF00266 Aminotransferase class-V INQ48_RS09525 PF00005 ABC transporter INQ48_RS09540 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase INQ48_RS09545 PF00171 Aldehyde dehydrogenase family INQ48_RS09560 PF01266 FAD dependent oxidoreductase INQ48_RS09570 PF00202 Aminotransferase class-III INQ48_RS09575 PF03466 LysR substrate binding domain INQ48_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS09580 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS09580 PF07840 FadR C-terminal domain INQ48_RS09590 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS09600 PF00005 ABC transporter INQ48_RS09605 PF00005 ABC transporter INQ48_RS09610 PF07687 Peptidase dimerisation domain INQ48_RS09610 PF01546 Peptidase family M20/M25/M40 INQ48_RS09615 PF07364 Metallopeptidase family M81 INQ48_RS09615 PF07171 MlrC C-terminus INQ48_RS09630 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS09630 PF01799 [2Fe-2S] binding domain INQ48_RS09635 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS09635 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS09640 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS09640 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS09645 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ48_RS09645 PF02190 ATP-dependent protease La (LON) substrate-binding domain INQ48_RS09645 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS09660 PF02625 XdhC and CoxI family INQ48_RS09660 PF13478 XdhC Rossmann domain INQ48_RS09665 PF00005 ABC transporter INQ48_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09700 PF03334 Na+/H+ antiporter subunit INQ48_RS09705 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) INQ48_RS09710 PF01899 Na+/H+ ion antiporter subunit INQ48_RS09715 PF00361 Proton-conducting membrane transporter INQ48_RS09720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INQ48_RS09725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INQ48_RS09725 PF13244 Domain of unknown function (DUF4040) INQ48_RS09725 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter INQ48_RS09725 PF00361 Proton-conducting membrane transporter INQ48_RS09730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) INQ48_RS09735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS09755 PF18073 Rubredoxin metal binding domain INQ48_RS09765 PF00216 Bacterial DNA-binding protein INQ48_RS09770 PF00575 S1 RNA binding domain INQ48_RS09775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ48_RS09780 PF02153 Prephenate dehydrogenase INQ48_RS09785 PF01817 Chorismate mutase type II INQ48_RS09785 PF01842 ACT domain INQ48_RS09785 PF00800 Prephenate dehydratase INQ48_RS09790 PF00266 Aminotransferase class-V INQ48_RS09800 PF03989 DNA gyrase C-terminal domain, beta-propeller INQ48_RS09800 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ48_RS09805 PF00691 OmpA family INQ48_RS09815 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS09830 PF10119 Predicted methyltransferase regulatory domain INQ48_RS09830 PF13847 Methyltransferase domain INQ48_RS09840 PF01479 S4 domain INQ48_RS09840 PF00849 RNA pseudouridylate synthase INQ48_RS09850 PF01522 Polysaccharide deacetylase INQ48_RS09865 PF02464 Competence-damaged protein INQ48_RS09865 PF00994 Probable molybdopterin binding domain INQ48_RS09865 PF18146 Damage-inducible protein CinA KH domain INQ48_RS09870 PF03951 Glutamine synthetase, beta-Grasp domain INQ48_RS09870 PF00120 Glutamine synthetase, catalytic domain INQ48_RS09880 PF00989 PAS fold INQ48_RS09880 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS09880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS09885 PF00158 Sigma-54 interaction domain INQ48_RS09885 PF02954 Bacterial regulatory protein, Fis family INQ48_RS09885 PF00072 Response regulator receiver domain INQ48_RS09895 PF03372 Endonuclease/Exonuclease/phosphatase family INQ48_RS09900 PF08281 Sigma-70, region 4 INQ48_RS09900 PF04542 Sigma-70 region 2 INQ48_RS09905 PF16220 Domain of unknown function (DUF4880) INQ48_RS09905 PF04773 FecR protein INQ48_RS09910 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS09910 PF07660 Secretin and TonB N terminus short domain INQ48_RS09910 PF00593 TonB dependent receptor INQ48_RS09915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS09915 PF03466 LysR substrate binding domain INQ48_RS09920 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS09950 PF00005 ABC transporter INQ48_RS09950 PF08402 TOBE domain INQ48_RS09955 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS09980 PF01425 Amidase INQ48_RS09990 PF01425 Amidase INQ48_RS09995 PF03352 Methyladenine glycosylase INQ48_RS10000 PF02515 CoA-transferase family III INQ48_RS10005 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS10005 PF00501 AMP-binding enzyme INQ48_RS10010 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS10010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS10010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS10015 PF17874 MalT-like TPR region INQ48_RS10015 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS10020 PF00106 short chain dehydrogenase INQ48_RS10025 PF12802 MarR family INQ48_RS10035 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS10040 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS10040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS10040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS10045 PF00501 AMP-binding enzyme INQ48_RS10045 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS10050 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10055 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS10060 PF00108 Thiolase, N-terminal domain INQ48_RS10060 PF02803 Thiolase, C-terminal domain INQ48_RS10070 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS10070 PF00501 AMP-binding enzyme INQ48_RS10080 PF01636 Phosphotransferase enzyme family INQ48_RS10095 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ48_RS10100 PF00034 Cytochrome c INQ48_RS10100 PF02790 Cytochrome C oxidase subunit II, transmembrane domain INQ48_RS10100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ48_RS10120 PF03706 Lysylphosphatidylglycerol synthase TM region INQ48_RS10125 PF04239 Protein of unknown function (DUF421) INQ48_RS10135 PF01068 ATP dependent DNA ligase domain INQ48_RS10135 PF04679 ATP dependent DNA ligase C terminal region INQ48_RS10135 PF13298 DNA polymerase Ligase (LigD) INQ48_RS10140 PF13609 Gram-negative porin INQ48_RS10145 PF00107 Zinc-binding dehydrogenase INQ48_RS10145 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS10150 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10155 PF05853 beta-keto acid cleavage enzyme INQ48_RS10160 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS10185 PF00186 Dihydrofolate reductase INQ48_RS10190 PF00303 Thymidylate synthase INQ48_RS10195 PF04542 Sigma-70 region 2 INQ48_RS10195 PF08281 Sigma-70, region 4 INQ48_RS10200 PF04773 FecR protein INQ48_RS10200 PF16220 Domain of unknown function (DUF4880) INQ48_RS10205 PF00593 TonB dependent receptor INQ48_RS10205 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS10210 PF02979 Nitrile hydratase, alpha chain INQ48_RS10215 PF02211 Nitrile hydratase beta subunit INQ48_RS10225 PF01565 FAD binding domain INQ48_RS10225 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS10235 PF03631 Virulence factor BrkB INQ48_RS10245 PF00085 Thioredoxin INQ48_RS10255 PF08386 TAP-like protein INQ48_RS10255 PF00561 alpha/beta hydrolase fold INQ48_RS10260 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS10270 PF00005 ABC transporter INQ48_RS10280 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS10285 PF13407 Periplasmic binding protein domain INQ48_RS10290 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS10295 PF00501 AMP-binding enzyme INQ48_RS10295 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS10300 PF01757 Acyltransferase family INQ48_RS10305 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS10315 PF08279 HTH domain INQ48_RS10315 PF13280 WYL domain INQ48_RS10320 PF13091 PLD-like domain INQ48_RS10330 PF00962 Adenosine/AMP deaminase INQ48_RS10335 PF03466 LysR substrate binding domain INQ48_RS10335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS10420 PF04055 Radical SAM superfamily INQ48_RS10425 PF02321 Outer membrane efflux protein INQ48_RS10430 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS10430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS10435 PF00873 AcrB/AcrD/AcrF family INQ48_RS10450 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INQ48_RS10450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS10465 PF00476 DNA polymerase family A INQ48_RS10465 PF01612 3'-5' exonuclease INQ48_RS10475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS10485 PF00756 Putative esterase INQ48_RS10490 PF00561 alpha/beta hydrolase fold INQ48_RS10495 PF00107 Zinc-binding dehydrogenase INQ48_RS10495 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS10500 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS10510 PF00355 Rieske [2Fe-2S] domain INQ48_RS10510 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS10515 PF03466 LysR substrate binding domain INQ48_RS10520 PF01220 Dehydroquinase class II INQ48_RS10525 PF04293 SpoVR like protein INQ48_RS10530 PF04285 Protein of unknown function (DUF444) INQ48_RS10535 PF06798 PrkA serine protein kinase C-terminal domain INQ48_RS10535 PF08298 PrkA AAA domain INQ48_RS10540 PF00684 DnaJ central domain INQ48_RS10540 PF00226 DnaJ domain INQ48_RS10540 PF01556 DnaJ C terminal domain INQ48_RS10545 PF00012 Hsp70 protein INQ48_RS10550 PF01025 GrpE INQ48_RS10555 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS10565 PF02666 Phosphatidylserine decarboxylase INQ48_RS10570 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10575 PF10282 Lactonase, 7-bladed beta-propeller INQ48_RS10580 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10595 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ48_RS10595 PF08666 SAF domain INQ48_RS10600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS10605 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS10610 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS10615 PF08450 SMP-30/Gluconolactonase/LRE-like region INQ48_RS10620 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS10625 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS10630 PF00005 ABC transporter INQ48_RS10635 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS10640 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS10645 PF07729 FCD domain INQ48_RS10645 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS10650 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10655 PF00701 Dihydrodipicolinate synthetase family INQ48_RS10665 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10670 PF13378 Enolase C-terminal domain-like INQ48_RS10670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ48_RS10675 PF00171 Aldehyde dehydrogenase family INQ48_RS10690 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS10700 PF07690 Major Facilitator Superfamily INQ48_RS10705 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS10715 PF03466 LysR substrate binding domain INQ48_RS10740 PF00005 ABC transporter INQ48_RS10745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS10750 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS10755 PF13091 PLD-like domain INQ48_RS10755 PF13396 Phospholipase_D-nuclease N-terminal INQ48_RS10765 PF01717 Cobalamin-independent synthase, Catalytic domain INQ48_RS10770 PF00355 Rieske [2Fe-2S] domain INQ48_RS10775 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS10775 PF07729 FCD domain INQ48_RS10780 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS10780 PF00970 Oxidoreductase FAD-binding domain INQ48_RS10785 PF13458 Periplasmic binding protein INQ48_RS10800 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS10800 PF00005 ABC transporter INQ48_RS10805 PF00005 ABC transporter INQ48_RS10810 PF07519 Tannase and feruloyl esterase INQ48_RS10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS10825 PF03466 LysR substrate binding domain INQ48_RS10830 PF00682 HMGL-like INQ48_RS10835 PF02515 CoA-transferase family III INQ48_RS10840 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS10850 PF07690 Major Facilitator Superfamily INQ48_RS10855 PF03979 Sigma-70 factor, region 1.1 INQ48_RS10855 PF04546 Sigma-70, non-essential region INQ48_RS10855 PF04542 Sigma-70 region 2 INQ48_RS10855 PF04539 Sigma-70 region 3 INQ48_RS10855 PF04545 Sigma-70, region 4 INQ48_RS10855 PF00140 Sigma-70 factor, region 1.2 INQ48_RS10860 PF08278 DNA primase DnaG DnaB-binding INQ48_RS10860 PF10410 DnaB-helicase binding domain of primase INQ48_RS10860 PF13662 Toprim domain INQ48_RS10860 PF01807 CHC2 zinc finger INQ48_RS10860 PF08275 DNA primase catalytic core, N-terminal domain INQ48_RS10865 PF03631 Virulence factor BrkB INQ48_RS10870 PF00106 short chain dehydrogenase INQ48_RS10875 PF09361 Phasin protein INQ48_RS10880 PF03061 Thioesterase superfamily INQ48_RS10890 PF05532 CsbD-like INQ48_RS10895 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain INQ48_RS10895 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family INQ48_RS10905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS10905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS10910 PF02646 RmuC family INQ48_RS10920 PF07690 Major Facilitator Superfamily INQ48_RS10930 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS10935 PF03641 Possible lysine decarboxylase INQ48_RS10940 PF01132 Elongation factor P (EF-P) OB domain INQ48_RS10940 PF08207 Elongation factor P (EF-P) KOW-like domain INQ48_RS10940 PF09285 Elongation factor P, C-terminal INQ48_RS10960 PF02151 UvrB/uvrC motif INQ48_RS10960 PF08459 UvrC Helix-hairpin-helix N-terminal INQ48_RS10960 PF01541 GIY-YIG catalytic domain INQ48_RS10965 PF01066 CDP-alcohol phosphatidyltransferase INQ48_RS10970 PF00892 EamA-like transporter family INQ48_RS10975 PF03466 LysR substrate binding domain INQ48_RS10975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS10980 PF00561 alpha/beta hydrolase fold INQ48_RS10985 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS10990 PF00216 Bacterial DNA-binding protein INQ48_RS11020 PF01161 Phosphatidylethanolamine-binding protein INQ48_RS11035 PF08659 KR domain INQ48_RS11035 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS11035 PF14765 Polyketide synthase dehydratase INQ48_RS11035 PF00550 Phosphopantetheine attachment site INQ48_RS11035 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS11035 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS11035 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS11035 PF00107 Zinc-binding dehydrogenase INQ48_RS11035 PF00698 Acyl transferase domain INQ48_RS11040 PF01975 Survival protein SurE INQ48_RS11050 PF01476 LysM domain INQ48_RS11050 PF01551 Peptidase family M23 INQ48_RS11055 PF04545 Sigma-70, region 4 INQ48_RS11055 PF04539 Sigma-70 region 3 INQ48_RS11055 PF04542 Sigma-70 region 2 INQ48_RS11055 PF00140 Sigma-70 factor, region 1.2 INQ48_RS11060 PF05958 tRNA (Uracil-5-)-methyltransferase INQ48_RS11065 PF01027 Inhibitor of apoptosis-promoting Bax1 INQ48_RS11070 PF03928 Haem-degrading INQ48_RS11080 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS11085 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS11100 PF18331 PKHD-type hydroxylase C-terminal domain INQ48_RS11100 PF13640 2OG-Fe(II) oxygenase superfamily INQ48_RS11105 PF00593 TonB dependent receptor INQ48_RS11105 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS11110 PF00175 Oxidoreductase NAD-binding domain INQ48_RS11110 PF00258 Flavodoxin INQ48_RS11110 PF00667 FAD binding domain INQ48_RS11115 PF02424 ApbE family INQ48_RS11135 PF00210 Ferritin-like domain INQ48_RS11140 PF10417 C-terminal domain of 1-Cys peroxiredoxin INQ48_RS11140 PF00578 AhpC/TSA family INQ48_RS11145 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS11145 PF13192 Thioredoxin domain INQ48_RS11150 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS11150 PF00593 TonB dependent receptor INQ48_RS11165 PF01032 FecCD transport family INQ48_RS11170 PF00005 ABC transporter INQ48_RS11175 PF03618 Kinase/pyrophosphorylase INQ48_RS11180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain INQ48_RS11180 PF02896 PEP-utilising enzyme, TIM barrel domain INQ48_RS11180 PF00391 PEP-utilising enzyme, mobile domain INQ48_RS11190 PF01250 Ribosomal protein S6 INQ48_RS11200 PF01084 Ribosomal protein S18 INQ48_RS11205 PF03948 Ribosomal protein L9, C-terminal domain INQ48_RS11205 PF01281 Ribosomal protein L9, N-terminal domain INQ48_RS11210 PF03796 DnaB-like helicase C terminal domain INQ48_RS11210 PF00772 DnaB-like helicase N terminal domain INQ48_RS11225 PF01878 EVE domain INQ48_RS11235 PF13638 PIN domain INQ48_RS11235 PF02562 PhoH-like protein INQ48_RS11240 PF00578 AhpC/TSA family INQ48_RS11250 PF00155 Aminotransferase class I and II INQ48_RS11260 PF03447 Homoserine dehydrogenase, NAD binding domain INQ48_RS11260 PF01842 ACT domain INQ48_RS11260 PF00742 Homoserine dehydrogenase INQ48_RS11265 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS11265 PF14821 Threonine synthase N terminus INQ48_RS11270 PF03205 Molybdopterin guanine dinucleotide synthesis protein B INQ48_RS11275 PF03453 MoeA N-terminal region (domain I and II) INQ48_RS11275 PF00994 Probable molybdopterin binding domain INQ48_RS11275 PF03454 MoeA C-terminal region (domain IV) INQ48_RS11285 PF00701 Dihydrodipicolinate synthetase family INQ48_RS11290 PF02391 MoaE protein INQ48_RS11295 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS11300 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS11300 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS11300 PF02861 Clp amino terminal domain, pathogenicity island component INQ48_RS11300 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS11300 PF17871 AAA lid domain INQ48_RS11310 PF00501 AMP-binding enzyme INQ48_RS11315 PF00005 ABC transporter INQ48_RS11335 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS11335 PF00005 ABC transporter INQ48_RS11340 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS11340 PF16925 Tetracyclin repressor-like, C-terminal domain INQ48_RS11345 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS11350 PF00108 Thiolase, N-terminal domain INQ48_RS11350 PF02803 Thiolase, C-terminal domain INQ48_RS11355 PF00472 RF-1 domain INQ48_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS11370 PF03466 LysR substrate binding domain INQ48_RS11375 PF00916 Sulfate permease family INQ48_RS11375 PF01740 STAS domain INQ48_RS11390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS11390 PF03466 LysR substrate binding domain INQ48_RS11395 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS11395 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS11400 PF00550 Phosphopantetheine attachment site INQ48_RS11415 PF07690 Major Facilitator Superfamily INQ48_RS11425 PF00005 ABC transporter INQ48_RS11430 PF03960 ArsC family INQ48_RS11440 PF00885 6,7-dimethyl-8-ribityllumazine synthase INQ48_RS11445 PF06224 Winged helix DNA-binding domain INQ48_RS11460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ48_RS11460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ48_RS11470 PF00005 ABC transporter INQ48_RS11475 PF09084 NMT1/THI5 like INQ48_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS11485 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS11490 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS11490 PF17938 Tetracyclin repressor-like, C-terminal domain INQ48_RS11495 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS11495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS11495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS11505 PF12833 Helix-turn-helix domain INQ48_RS11525 PF00463 Isocitrate lyase family INQ48_RS11530 PF02824 TGS domain INQ48_RS11530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ48_RS11530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ48_RS11530 PF03129 Anticodon binding domain INQ48_RS11535 PF00707 Translation initiation factor IF-3, C-terminal domain INQ48_RS11535 PF05198 Translation initiation factor IF-3, N-terminal domain INQ48_RS11540 PF01632 Ribosomal protein L35 INQ48_RS11545 PF00453 Ribosomal protein L20 INQ48_RS11550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain INQ48_RS11550 PF01409 tRNA synthetases class II core domain (F) INQ48_RS11555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain INQ48_RS11555 PF01588 Putative tRNA binding domain INQ48_RS11555 PF03147 Ferredoxin-fold anticodon binding domain INQ48_RS11555 PF03484 tRNA synthetase B5 domain INQ48_RS11555 PF03483 B3/4 domain INQ48_RS11560 PF00216 Bacterial DNA-binding protein INQ48_RS11595 PF04235 Protein of unknown function (DUF418) INQ48_RS11600 PF13091 PLD-like domain INQ48_RS11605 PF01476 LysM domain INQ48_RS11605 PF01551 Peptidase family M23 INQ48_RS11610 PF05981 CreA protein INQ48_RS11620 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS11630 PF13417 Glutathione S-transferase, N-terminal domain INQ48_RS11635 PF02578 Multi-copper polyphenol oxidoreductase laccase INQ48_RS11645 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus INQ48_RS11650 PF00108 Thiolase, N-terminal domain INQ48_RS11650 PF02803 Thiolase, C-terminal domain INQ48_RS11660 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS11665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS11665 PF03466 LysR substrate binding domain INQ48_RS11670 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS11680 PF02515 CoA-transferase family III INQ48_RS11685 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS11690 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS11695 PF02464 Competence-damaged protein INQ48_RS11695 PF00994 Probable molybdopterin binding domain INQ48_RS11695 PF18146 Damage-inducible protein CinA KH domain INQ48_RS11700 PF00106 short chain dehydrogenase INQ48_RS11705 PF00999 Sodium/hydrogen exchanger family INQ48_RS11705 PF02254 TrkA-N domain INQ48_RS11720 PF00593 TonB dependent receptor INQ48_RS11720 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS11735 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ48_RS11735 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS11740 PF02514 CobN/Magnesium Chelatase INQ48_RS11745 PF07728 AAA domain (dynein-related subfamily) INQ48_RS11745 PF17863 AAA lid domain INQ48_RS11745 PF13519 von Willebrand factor type A domain INQ48_RS11755 PF01406 tRNA synthetases class I (C) catalytic domain INQ48_RS11765 PF01497 Periplasmic binding protein INQ48_RS11780 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) INQ48_RS11810 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS11825 PF02082 Transcriptional regulator INQ48_RS11830 PF02830 V4R domain INQ48_RS11830 PF00158 Sigma-54 interaction domain INQ48_RS11830 PF06505 Activator of aromatic catabolism INQ48_RS11830 PF02954 Bacterial regulatory protein, Fis family INQ48_RS11835 PF06099 Phenol hydroxylase subunit INQ48_RS11840 PF02332 Methane/Phenol/Toluene Hydroxylase INQ48_RS11850 PF02332 Methane/Phenol/Toluene Hydroxylase INQ48_RS11850 PF04945 YHS domain INQ48_RS11855 PF04663 Phenol hydroxylase conserved region INQ48_RS11860 PF00175 Oxidoreductase NAD-binding domain INQ48_RS11860 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS11860 PF00970 Oxidoreductase FAD-binding domain INQ48_RS11865 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS11870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS11875 PF00561 alpha/beta hydrolase fold INQ48_RS11885 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation INQ48_RS11885 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ48_RS11890 PF00682 HMGL-like INQ48_RS11890 PF07836 DmpG-like communication domain INQ48_RS11905 PF12146 Serine aminopeptidase, S33 INQ48_RS11920 PF00106 short chain dehydrogenase INQ48_RS11925 PF01965 DJ-1/PfpI family INQ48_RS11925 PF12833 Helix-turn-helix domain INQ48_RS11935 PF02525 Flavodoxin-like fold INQ48_RS11940 PF00893 Small Multidrug Resistance protein INQ48_RS11945 PF01638 HxlR-like helix-turn-helix INQ48_RS11950 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS11955 PF00561 alpha/beta hydrolase fold INQ48_RS11960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS11960 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS11960 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS11970 PF13932 GidA associated domain INQ48_RS11970 PF01134 Glucose inhibited division protein A INQ48_RS11975 PF01425 Amidase INQ48_RS11995 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS12020 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS12020 PF00355 Rieske [2Fe-2S] domain INQ48_RS12025 PF00881 Nitroreductase family INQ48_RS12040 PF03466 LysR substrate binding domain INQ48_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS12045 PF03466 LysR substrate binding domain INQ48_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS12060 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS12070 PF02525 Flavodoxin-like fold INQ48_RS12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS12075 PF03466 LysR substrate binding domain INQ48_RS12110 PF10946 Protein of unknown function DUF2625 INQ48_RS12130 PF07690 Major Facilitator Superfamily INQ48_RS12155 PF00009 Elongation factor Tu GTP binding domain INQ48_RS12155 PF03143 Elongation factor Tu C-terminal domain INQ48_RS12155 PF03144 Elongation factor Tu domain 2 INQ48_RS12175 PF13302 Acetyltransferase (GNAT) domain INQ48_RS12175 PF03352 Methyladenine glycosylase INQ48_RS12175 PF00958 GMP synthase C terminal domain INQ48_RS12175 PF00117 Glutamine amidotransferase class-I INQ48_RS12175 PF13673 Acetyltransferase (GNAT) domain INQ48_RS12185 PF01638 HxlR-like helix-turn-helix INQ48_RS12210 PF00929 Exonuclease INQ48_RS12230 PF00135 Carboxylesterase family INQ48_RS12235 PF01037 Lrp/AsnC ligand binding domain INQ48_RS12240 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS12240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS12240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS12250 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS12265 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS12270 PF01425 Amidase INQ48_RS12275 PF00083 Sugar (and other) transporter INQ48_RS12275 PF07690 Major Facilitator Superfamily INQ48_RS12290 PF00376 MerR family regulatory protein INQ48_RS12290 PF09278 MerR, DNA binding INQ48_RS12300 PF01207 Dihydrouridine synthase (Dus) INQ48_RS12305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS12310 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS12315 PF09339 IclR helix-turn-helix domain INQ48_RS12320 PF07729 FCD domain INQ48_RS12320 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS12325 PF02310 B12 binding domain INQ48_RS12325 PF01642 Methylmalonyl-CoA mutase INQ48_RS12345 PF01039 Carboxyl transferase domain INQ48_RS12350 PF18140 Propionyl-coenzyme A carboxylase BT domain INQ48_RS12350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS12350 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS12350 PF02785 Biotin carboxylase C-terminal domain INQ48_RS12350 PF00364 Biotin-requiring enzyme INQ48_RS12355 PF06968 Biotin and Thiamin Synthesis associated domain INQ48_RS12355 PF04055 Radical SAM superfamily INQ48_RS12365 PF01037 Lrp/AsnC ligand binding domain INQ48_RS12370 PF00892 EamA-like transporter family INQ48_RS12380 PF04060 Putative Fe-S cluster INQ48_RS12390 PF00155 Aminotransferase class I and II INQ48_RS12395 PF17757 UvrB interaction domain INQ48_RS12395 PF12344 Ultra-violet resistance protein B INQ48_RS12395 PF02151 UvrB/uvrC motif INQ48_RS12395 PF04851 Type III restriction enzyme, res subunit INQ48_RS12395 PF00271 Helicase conserved C-terminal domain INQ48_RS12400 PF02082 Transcriptional regulator INQ48_RS12405 PF00266 Aminotransferase class-V INQ48_RS12410 PF01592 NifU-like N terminal domain INQ48_RS12415 PF01521 Iron-sulphur cluster biosynthesis INQ48_RS12420 PF07743 HSCB C-terminal oligomerisation domain INQ48_RS12425 PF00012 Hsp70 protein INQ48_RS12430 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS12435 PF00929 Exonuclease INQ48_RS12450 PF01266 FAD dependent oxidoreductase INQ48_RS12465 PF01180 Dihydroorotate dehydrogenase INQ48_RS12470 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) INQ48_RS12480 PF01432 Peptidase family M3 INQ48_RS12485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain INQ48_RS12485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain INQ48_RS12490 PF00072 Response regulator receiver domain INQ48_RS12490 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS12495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS12495 PF00989 PAS fold INQ48_RS12495 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS12500 PF17831 Pyruvate dehydrogenase E1 component middle domain INQ48_RS12500 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS12510 PF00227 Proteasome subunit INQ48_RS12515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ48_RS12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS12520 PF00877 NlpC/P60 family INQ48_RS12525 PF07995 Glucose / Sorbosone dehydrogenase INQ48_RS12535 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal INQ48_RS12535 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal INQ48_RS12550 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS12550 PF00501 AMP-binding enzyme INQ48_RS12550 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ48_RS12555 PF16870 2-oxoglutarate dehydrogenase C-terminal INQ48_RS12555 PF02779 Transketolase, pyrimidine binding domain INQ48_RS12555 PF00676 Dehydrogenase E1 component INQ48_RS12555 PF16078 2-oxoglutarate dehydrogenase N-terminus INQ48_RS12560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) INQ48_RS12560 PF00364 Biotin-requiring enzyme INQ48_RS12560 PF02817 e3 binding domain INQ48_RS12565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ48_RS12565 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS12570 PF03969 AFG1-like ATPase INQ48_RS12590 PF13307 Helicase C-terminal domain INQ48_RS12590 PF04851 Type III restriction enzyme, res subunit INQ48_RS12595 PF13525 Outer membrane lipoprotein INQ48_RS12600 PF00849 RNA pseudouridylate synthase INQ48_RS12600 PF01479 S4 domain INQ48_RS12605 PF04079 Segregation and condensation complex subunit ScpB INQ48_RS12610 PF00849 RNA pseudouridylate synthase INQ48_RS12610 PF01479 S4 domain INQ48_RS12615 PF00334 Nucleoside diphosphate kinase INQ48_RS12620 PF04055 Radical SAM superfamily INQ48_RS12635 PF04551 GcpE protein INQ48_RS12640 PF03129 Anticodon binding domain INQ48_RS12640 PF13393 Histidyl-tRNA synthetase INQ48_RS12650 PF13360 PQQ-like domain INQ48_RS12655 PF01926 50S ribosome-binding GTPase INQ48_RS12655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal INQ48_RS12660 PF17209 Hfq protein INQ48_RS12665 PF01926 50S ribosome-binding GTPase INQ48_RS12665 PF13167 GTP-binding GTPase N-terminal INQ48_RS12665 PF16360 GTP-binding GTPase Middle Region INQ48_RS12670 PF12221 Bacterial membrane protein N terminal INQ48_RS12670 PF01145 SPFH domain / Band 7 family INQ48_RS12675 PF01145 SPFH domain / Band 7 family INQ48_RS12685 PF13393 Histidyl-tRNA synthetase INQ48_RS12690 PF00709 Adenylosuccinate synthetase INQ48_RS12720 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS12730 PF13472 GDSL-like Lipase/Acylhydrolase family INQ48_RS12735 PF00005 ABC transporter INQ48_RS12740 PF16320 Ribosomal protein L7/L12 dimerisation domain INQ48_RS12740 PF00542 Ribosomal protein L7/L12 C-terminal domain INQ48_RS12750 PF00588 SpoU rRNA Methylase family INQ48_RS12750 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ48_RS12775 PF00248 Aldo/keto reductase family INQ48_RS12780 PF02417 Chromate transporter INQ48_RS12810 PF06314 Acetoacetate decarboxylase (ADC) INQ48_RS12820 PF00583 Acetyltransferase (GNAT) family INQ48_RS12820 PF01047 MarR family INQ48_RS12825 PF11842 Domain of unknown function (DUF3362) INQ48_RS12825 PF04055 Radical SAM superfamily INQ48_RS12825 PF08497 Radical SAM N-terminal INQ48_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS12860 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS12865 PF02515 CoA-transferase family III INQ48_RS12875 PF01037 Lrp/AsnC ligand binding domain INQ48_RS12895 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS12905 PF01168 Alanine racemase, N-terminal domain INQ48_RS12905 PF14031 Putative serine dehydratase domain INQ48_RS12910 PF03466 LysR substrate binding domain INQ48_RS12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS12925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS12930 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS12935 PF00581 Rhodanese-like domain INQ48_RS12965 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS12970 PF00005 ABC transporter INQ48_RS12985 PF02803 Thiolase, C-terminal domain INQ48_RS12985 PF00108 Thiolase, N-terminal domain INQ48_RS12990 PF00501 AMP-binding enzyme INQ48_RS12990 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS12995 PF02632 BioY family INQ48_RS13010 PF00128 Alpha amylase, catalytic domain INQ48_RS13010 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) INQ48_RS13035 PF00593 TonB dependent receptor INQ48_RS13035 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS13055 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS13055 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS13065 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS13065 PF13192 Thioredoxin domain INQ48_RS13075 PF02503 Polyphosphate kinase middle domain INQ48_RS13075 PF17941 Polyphosphate kinase C-terminal domain 1 INQ48_RS13075 PF13090 Polyphosphate kinase C-terminal domain 2 INQ48_RS13075 PF13089 Polyphosphate kinase N-terminal domain INQ48_RS13085 PF02541 Ppx/GppA phosphatase family INQ48_RS13090 PF12849 PBP superfamily domain INQ48_RS13095 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS13100 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS13105 PF00005 ABC transporter INQ48_RS13110 PF01895 PhoU domain INQ48_RS13115 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS13115 PF00072 Response regulator receiver domain INQ48_RS13120 PF11808 Phosphate regulon sensor protein PhoR INQ48_RS13120 PF00989 PAS fold INQ48_RS13120 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS13125 PF01554 MatE INQ48_RS13135 PF01197 Ribosomal protein L31 INQ48_RS13140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ48_RS13140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ48_RS13145 PF07498 Rho termination factor, N-terminal domain INQ48_RS13145 PF07497 Rho termination factor, RNA-binding domain INQ48_RS13145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ48_RS13150 PF00085 Thioredoxin INQ48_RS13160 PF12705 PD-(D/E)XK nuclease superfamily INQ48_RS13160 PF13361 UvrD-like helicase C-terminal domain INQ48_RS13160 PF00580 UvrD/REP helicase N-terminal domain INQ48_RS13175 PF12170 DNA polymerase III tau subunit V interacting with alpha INQ48_RS13175 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding INQ48_RS13175 PF12169 DNA polymerase III subunits gamma and tau domain III INQ48_RS13180 PF02575 YbaB/EbfC DNA-binding family INQ48_RS13185 PF13662 Toprim domain INQ48_RS13185 PF02132 RecR protein INQ48_RS13200 PF00005 ABC transporter INQ48_RS13205 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS13210 PF02254 TrkA-N domain INQ48_RS13210 PF00999 Sodium/hydrogen exchanger family INQ48_RS13215 PF01476 LysM domain INQ48_RS13215 PF01464 Transglycosylase SLT domain INQ48_RS13220 PF00753 Metallo-beta-lactamase superfamily INQ48_RS13220 PF16123 Hydroxyacylglutathione hydrolase C-terminus INQ48_RS13230 PF00075 RNase H INQ48_RS13245 PF01425 Amidase INQ48_RS13250 PF01425 Amidase INQ48_RS13260 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS13270 PF00005 ABC transporter INQ48_RS13275 PF00005 ABC transporter INQ48_RS13285 PF03466 LysR substrate binding domain INQ48_RS13285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS13290 PF02515 CoA-transferase family III INQ48_RS13300 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS13305 PF03454 MoeA C-terminal region (domain IV) INQ48_RS13305 PF00994 Probable molybdopterin binding domain INQ48_RS13305 PF03453 MoeA N-terminal region (domain I and II) INQ48_RS13310 PF04055 Radical SAM superfamily INQ48_RS13310 PF06463 Molybdenum Cofactor Synthesis C INQ48_RS13320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ48_RS13320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ48_RS13325 PF02535 ZIP Zinc transporter INQ48_RS13330 PF00171 Aldehyde dehydrogenase family INQ48_RS13340 PF13091 PLD-like domain INQ48_RS13400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS13410 PF03030 Inorganic H+ pyrophosphatase INQ48_RS13415 PF00719 Inorganic pyrophosphatase INQ48_RS13435 PF02540 NAD synthase INQ48_RS13435 PF00795 Carbon-nitrogen hydrolase INQ48_RS13440 PF00543 Nitrogen regulatory protein P-II INQ48_RS13445 PF03641 Possible lysine decarboxylase INQ48_RS13450 PF01219 Prokaryotic diacylglycerol kinase INQ48_RS13475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS13475 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS13475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS13480 PF10369 Small subunit of acetolactate synthase INQ48_RS13485 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain INQ48_RS13485 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain INQ48_RS13490 PF01066 CDP-alcohol phosphatidyltransferase INQ48_RS13495 PF08502 LeuA allosteric (dimerisation) domain INQ48_RS13495 PF00682 HMGL-like INQ48_RS13500 PF00682 HMGL-like INQ48_RS13500 PF08502 LeuA allosteric (dimerisation) domain INQ48_RS13505 PF00768 D-alanyl-D-alanine carboxypeptidase INQ48_RS13515 PF04376 Arginine-tRNA-protein transferase, N terminus INQ48_RS13515 PF04377 Arginine-tRNA-protein transferase, C terminus INQ48_RS13520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase INQ48_RS13525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS13525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS13530 PF12833 Helix-turn-helix domain INQ48_RS13540 PF01494 FAD binding domain INQ48_RS13545 PF09339 IclR helix-turn-helix domain INQ48_RS13545 PF01614 Bacterial transcriptional regulator INQ48_RS13550 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS13550 PF00072 Response regulator receiver domain INQ48_RS13555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS13555 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS13560 PF13180 PDZ domain INQ48_RS13560 PF17820 PDZ domain INQ48_RS13575 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS13575 PF00072 Response regulator receiver domain INQ48_RS13580 PF13280 WYL domain INQ48_RS13635 PF01556 DnaJ C terminal domain INQ48_RS13635 PF00684 DnaJ central domain INQ48_RS13635 PF00226 DnaJ domain INQ48_RS13780 PF00114 Pilin (bacterial filament) INQ48_RS13780 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS13785 PF01381 Helix-turn-helix INQ48_RS13855 PF05866 Endodeoxyribonuclease RusA INQ48_RS13875 PF00717 Peptidase S24-like INQ48_RS13875 PF01726 LexA DNA binding domain INQ48_RS14055 PF00565 Staphylococcal nuclease homologue INQ48_RS14100 PF00593 TonB dependent receptor INQ48_RS14100 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS14105 PF02581 Thiamine monophosphate synthase INQ48_RS14110 PF05690 Thiazole biosynthesis protein ThiG INQ48_RS14120 PF01266 FAD dependent oxidoreductase INQ48_RS14125 PF08543 Phosphomethylpyrimidine kinase INQ48_RS14135 PF02743 Cache domain INQ48_RS14135 PF00672 HAMP domain INQ48_RS14135 PF00211 Adenylate and Guanylate cyclase catalytic domain INQ48_RS14140 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS14140 PF00175 Oxidoreductase NAD-binding domain INQ48_RS14145 PF00355 Rieske [2Fe-2S] domain INQ48_RS14150 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS14155 PF03466 LysR substrate binding domain INQ48_RS14155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS14165 PF00202 Aminotransferase class-III INQ48_RS14170 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS14175 PF11953 Domain of unknown function (DUF3470) INQ48_RS14175 PF00037 4Fe-4S binding domain INQ48_RS14180 PF00009 Elongation factor Tu GTP binding domain INQ48_RS14185 PF01507 Phosphoadenosine phosphosulfate reductase family INQ48_RS14190 PF01507 Phosphoadenosine phosphosulfate reductase family INQ48_RS14210 PF03576 Peptidase family S58 INQ48_RS14215 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14215 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS14230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS14230 PF00005 ABC transporter INQ48_RS14235 PF01112 Asparaginase INQ48_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS14245 PF03466 LysR substrate binding domain INQ48_RS14250 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS14255 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS14265 PF04972 BON domain INQ48_RS14265 PF00691 OmpA family INQ48_RS14270 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS14275 PF01546 Peptidase family M20/M25/M40 INQ48_RS14275 PF07687 Peptidase dimerisation domain INQ48_RS14280 PF01037 Lrp/AsnC ligand binding domain INQ48_RS14290 PF00248 Aldo/keto reductase family INQ48_RS14295 PF03466 LysR substrate binding domain INQ48_RS14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS14305 PF01266 FAD dependent oxidoreductase INQ48_RS14310 PF00274 Fructose-bisphosphate aldolase class-I INQ48_RS14315 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain INQ48_RS14315 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain INQ48_RS14325 PF01625 Peptide methionine sulfoxide reductase INQ48_RS14335 PF00174 Oxidoreductase molybdopterin binding domain INQ48_RS14340 PF01292 Prokaryotic cytochrome b561 INQ48_RS14345 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS14345 PF00072 Response regulator receiver domain INQ48_RS14350 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS14350 PF00672 HAMP domain INQ48_RS14350 PF18698 Histidine kinase sensor domain INQ48_RS14350 PF00989 PAS fold INQ48_RS14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS14355 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS14380 PF04362 Bacterial Fe(2+) trafficking INQ48_RS14390 PF03358 NADPH-dependent FMN reductase INQ48_RS14395 PF09084 NMT1/THI5 like INQ48_RS14400 PF09084 NMT1/THI5 like INQ48_RS14405 PF00296 Luciferase-like monooxygenase INQ48_RS14410 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14415 PF09084 NMT1/THI5 like INQ48_RS14420 PF00005 ABC transporter INQ48_RS14425 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS14430 PF00881 Nitroreductase family INQ48_RS14435 PF03459 TOBE domain INQ48_RS14450 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS14465 PF00266 Aminotransferase class-V INQ48_RS14480 PF04820 Tryptophan halogenase INQ48_RS14485 PF07804 HipA-like C-terminal domain INQ48_RS14490 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS14490 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS14505 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS14510 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14515 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14520 PF03358 NADPH-dependent FMN reductase INQ48_RS14545 PF02525 Flavodoxin-like fold INQ48_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS14550 PF03466 LysR substrate binding domain INQ48_RS14555 PF10417 C-terminal domain of 1-Cys peroxiredoxin INQ48_RS14555 PF00578 AhpC/TSA family INQ48_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14575 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS14580 PF12857 TOBE-like domain INQ48_RS14580 PF17850 CysA C-terminal regulatory domain INQ48_RS14580 PF00005 ABC transporter INQ48_RS14585 PF02600 Disulfide bond formation protein DsbB INQ48_RS14590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS14595 PF00005 ABC transporter INQ48_RS14595 PF02687 FtsX-like permease family INQ48_RS14595 PF12704 MacB-like periplasmic core domain INQ48_RS14600 PF02321 Outer membrane efflux protein INQ48_RS14620 PF01709 Transcriptional regulator INQ48_RS14625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain INQ48_RS14625 PF02844 Phosphoribosylglycinamide synthetase, N domain INQ48_RS14625 PF02843 Phosphoribosylglycinamide synthetase, C domain INQ48_RS14630 PF01218 Coproporphyrinogen III oxidase INQ48_RS14635 PF01467 Cytidylyltransferase-like INQ48_RS14645 PF02590 Predicted SPOUT methyltransferase INQ48_RS14650 PF02545 Maf-like protein INQ48_RS14655 PF10150 Ribonuclease E/G family INQ48_RS14655 PF00575 S1 RNA binding domain INQ48_RS14660 PF07690 Major Facilitator Superfamily INQ48_RS14665 PF05853 beta-keto acid cleavage enzyme INQ48_RS14675 PF07729 FCD domain INQ48_RS14675 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS14680 PF00005 ABC transporter INQ48_RS14680 PF00664 ABC transporter transmembrane region INQ48_RS14685 PF04052 TolB amino-terminal domain INQ48_RS14685 PF07676 WD40-like Beta Propeller Repeat INQ48_RS14690 PF00691 OmpA family INQ48_RS14700 PF00899 ThiF family INQ48_RS14740 PF12833 Helix-turn-helix domain INQ48_RS14740 PF14525 AraC-binding-like domain INQ48_RS14750 PF01738 Dienelactone hydrolase family INQ48_RS14755 PF00175 Oxidoreductase NAD-binding domain INQ48_RS14755 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS14760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS14760 PF00355 Rieske [2Fe-2S] domain INQ48_RS14765 PF00866 Ring hydroxylating beta subunit INQ48_RS14795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ48_RS14795 PF00460 Flagella basal body rod protein INQ48_RS14800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase INQ48_RS14800 PF10135 Rod binding protein INQ48_RS14805 PF02119 Flagellar P-ring protein INQ48_RS14810 PF02107 Flagellar L-ring protein INQ48_RS14815 PF00460 Flagella basal body rod protein INQ48_RS14815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ48_RS14820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ48_RS14820 PF00460 Flagella basal body rod protein INQ48_RS14825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ48_RS14825 PF00460 Flagella basal body rod protein INQ48_RS14825 PF07559 Flagellar basal body protein FlaE INQ48_RS14830 PF13861 FlgD Tudor-like domain INQ48_RS14830 PF03963 Flagellar hook capping protein - N-terminal region INQ48_RS14830 PF13860 FlgD Ig-like domain INQ48_RS14835 PF00460 Flagella basal body rod protein INQ48_RS14835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal INQ48_RS14840 PF00460 Flagella basal body rod protein INQ48_RS14845 PF13144 Chaperone for flagella basal body P-ring formation INQ48_RS14860 PF06977 SdiA-regulated INQ48_RS14865 PF03466 LysR substrate binding domain INQ48_RS14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS14870 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ48_RS14880 PF04539 Sigma-70 region 3 INQ48_RS14880 PF04542 Sigma-70 region 2 INQ48_RS14880 PF04545 Sigma-70, region 4 INQ48_RS14885 PF00448 SRP54-type protein, GTPase domain INQ48_RS14885 PF00448 SRP54-type protein, GTPase domain INQ48_RS14890 PF00771 FHIPEP family INQ48_RS14895 PF01312 FlhB HrpN YscU SpaS Family INQ48_RS14900 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ48_RS14900 PF00691 OmpA family INQ48_RS14905 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS14910 PF05280 Flagellar transcriptional activator (FlhC) INQ48_RS14915 PF05247 Flagellar transcriptional activator (FlhD) INQ48_RS14920 PF00700 Bacterial flagellin C-terminal helical region INQ48_RS14920 PF00669 Bacterial flagellin N-terminal helical region INQ48_RS14925 PF02465 Flagellar hook-associated protein 2 N-terminus INQ48_RS14925 PF07195 Flagellar hook-associated protein 2 C-terminus INQ48_RS14925 PF07196 Flagellin hook IN motif INQ48_RS14930 PF02561 Flagellar protein FliS INQ48_RS14950 PF14841 FliG middle domain INQ48_RS14950 PF14842 FliG N-terminal domain INQ48_RS14950 PF01706 FliG C-terminal domain INQ48_RS14960 PF18269 T3SS EscN ATPase C-terminal domain INQ48_RS14960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain INQ48_RS14980 PF02154 Flagellar motor switch protein FliM INQ48_RS14980 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ48_RS14985 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term INQ48_RS14990 PF04347 Flagellar biosynthesis protein, FliO INQ48_RS14995 PF00813 FliP family INQ48_RS15000 PF01313 Bacterial export proteins, family 3 INQ48_RS15005 PF01311 Bacterial export proteins, family 1 INQ48_RS15040 PF05175 Methyltransferase small domain INQ48_RS15045 PF07687 Peptidase dimerisation domain INQ48_RS15045 PF01546 Peptidase family M20/M25/M40 INQ48_RS15050 PF00437 Type II/IV secretion system protein INQ48_RS15055 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS15055 PF14602 Hexapeptide repeat of succinyl-transferase INQ48_RS15055 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal INQ48_RS15060 PF00155 Aminotransferase class I and II INQ48_RS15065 PF01810 LysE type translocator INQ48_RS15070 PF00583 Acetyltransferase (GNAT) family INQ48_RS15070 PF00696 Amino acid kinase family INQ48_RS15075 PF01434 Peptidase family M41 INQ48_RS15075 PF17862 AAA+ lid domain INQ48_RS15075 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS15080 PF11898 Domain of unknown function (DUF3418) INQ48_RS15080 PF00270 DEAD/DEAH box helicase INQ48_RS15080 PF04408 Helicase associated domain (HA2) INQ48_RS15080 PF00271 Helicase conserved C-terminal domain INQ48_RS15080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold INQ48_RS15100 PF00155 Aminotransferase class I and II INQ48_RS15105 PF03466 LysR substrate binding domain INQ48_RS15105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS15125 PF02789 Cytosol aminopeptidase family, N-terminal domain INQ48_RS15125 PF00883 Cytosol aminopeptidase family, catalytic domain INQ48_RS15140 PF13458 Periplasmic binding protein INQ48_RS15160 PF01145 SPFH domain / Band 7 family INQ48_RS15170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain INQ48_RS15170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain INQ48_RS15170 PF01276 Orn/Lys/Arg decarboxylase, major domain INQ48_RS15175 PF01068 ATP dependent DNA ligase domain INQ48_RS15175 PF14743 DNA ligase OB-like domain INQ48_RS15185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS15190 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS15195 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS15195 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS15200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS15200 PF00005 ABC transporter INQ48_RS15205 PF06779 Uncharacterised MFS-type transporter YbfB INQ48_RS15210 PF02576 RimP N-terminal domain INQ48_RS15215 PF08529 NusA N-terminal domain INQ48_RS15215 PF13184 NusA-like KH domain INQ48_RS15215 PF00575 S1 RNA binding domain INQ48_RS15225 PF02033 Ribosome-binding factor A INQ48_RS15230 PF16198 tRNA pseudouridylate synthase B C-terminal domain INQ48_RS15230 PF01509 TruB family pseudouridylate synthase (N terminal domain) INQ48_RS15235 PF00679 Elongation factor G C-terminus INQ48_RS15235 PF00009 Elongation factor Tu GTP binding domain INQ48_RS15235 PF03144 Elongation factor Tu domain 2 INQ48_RS15255 PF08281 Sigma-70, region 4 INQ48_RS15255 PF04542 Sigma-70 region 2 INQ48_RS15265 PF01668 SmpB protein INQ48_RS15270 PF14525 AraC-binding-like domain INQ48_RS15270 PF12833 Helix-turn-helix domain INQ48_RS15285 PF01613 Flavin reductase like domain INQ48_RS15290 PF01738 Dienelactone hydrolase family INQ48_RS15295 PF03364 Polyketide cyclase / dehydrase and lipid transport INQ48_RS15300 PF03658 RnfH family Ubiquitin INQ48_RS15310 PF00478 IMP dehydrogenase / GMP reductase domain INQ48_RS15310 PF00571 CBS domain INQ48_RS15325 PF02540 NAD synthase INQ48_RS15325 PF00958 GMP synthase C terminal domain INQ48_RS15325 PF00117 Glutamine amidotransferase class-I INQ48_RS15335 PF00107 Zinc-binding dehydrogenase INQ48_RS15335 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS15345 PF12706 Beta-lactamase superfamily domain INQ48_RS15350 PF08361 MAATS-type transcriptional repressor, C-terminal region INQ48_RS15350 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS15355 PF02423 Ornithine cyclodeaminase/mu-crystallin family INQ48_RS15360 PF01568 Molydopterin dinucleotide binding domain INQ48_RS15360 PF00384 Molybdopterin oxidoreductase INQ48_RS15365 PF02667 Short chain fatty acid transporter INQ48_RS15370 PF03466 LysR substrate binding domain INQ48_RS15370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS15375 PF02678 Pirin INQ48_RS15375 PF05726 Pirin C-terminal cupin domain INQ48_RS15380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS15380 PF03466 LysR substrate binding domain INQ48_RS15405 PF00881 Nitroreductase family INQ48_RS15420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS15420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS15430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS15430 PF03466 LysR substrate binding domain INQ48_RS15435 PF00175 Oxidoreductase NAD-binding domain INQ48_RS15435 PF00970 Oxidoreductase FAD-binding domain INQ48_RS15435 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS15440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS15440 PF00355 Rieske [2Fe-2S] domain INQ48_RS15445 PF13577 SnoaL-like domain INQ48_RS15455 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS15460 PF00355 Rieske [2Fe-2S] domain INQ48_RS15480 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS15480 PF00989 PAS fold INQ48_RS15480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS15485 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS15485 PF00072 Response regulator receiver domain INQ48_RS15505 PF14437 MafB19-like deaminase INQ48_RS15510 PF02016 LD-carboxypeptidase N-terminal domain INQ48_RS15510 PF17676 LD-carboxypeptidase C-terminal domain INQ48_RS15520 PF00211 Adenylate and Guanylate cyclase catalytic domain INQ48_RS15520 PF16701 Adenylate cyclase regulatory domain INQ48_RS15560 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS15560 PF07660 Secretin and TonB N terminus short domain INQ48_RS15560 PF00593 TonB dependent receptor INQ48_RS15590 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS15595 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS15615 PF09312 SurA N-terminal domain INQ48_RS15640 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS15640 PF00072 Response regulator receiver domain INQ48_RS15645 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS15645 PF07689 KaiB domain INQ48_RS15650 PF01339 CheB methylesterase INQ48_RS15655 PF01739 CheR methyltransferase, SAM binding domain INQ48_RS15655 PF03705 CheR methyltransferase, all-alpha domain INQ48_RS15660 PF00672 HAMP domain INQ48_RS15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS15660 PF01627 Hpt domain INQ48_RS15660 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS15660 PF00072 Response regulator receiver domain INQ48_RS15660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) INQ48_RS15670 PF13307 Helicase C-terminal domain INQ48_RS15670 PF04851 Type III restriction enzyme, res subunit INQ48_RS15670 PF00929 Exonuclease INQ48_RS15680 PF01554 MatE INQ48_RS15685 PF12833 Helix-turn-helix domain INQ48_RS15685 PF06445 GyrI-like small molecule binding domain INQ48_RS15715 PF02585 GlcNAc-PI de-N-acetylase INQ48_RS15715 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase INQ48_RS15740 PF00248 Aldo/keto reductase family INQ48_RS15745 PF06719 AraC-type transcriptional regulator N-terminus INQ48_RS15745 PF12833 Helix-turn-helix domain INQ48_RS15755 PF01545 Cation efflux family INQ48_RS15755 PF16916 Dimerisation domain of Zinc Transporter INQ48_RS15775 PF01799 [2Fe-2S] binding domain INQ48_RS15775 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS15780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS15790 PF00355 Rieske [2Fe-2S] domain INQ48_RS15805 PF00248 Aldo/keto reductase family INQ48_RS15810 PF07311 Dodecin INQ48_RS15820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS15820 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP INQ48_RS15820 PF00034 Cytochrome c INQ48_RS15825 PF00005 ABC transporter INQ48_RS15840 PF01569 PAP2 superfamily INQ48_RS15860 PF01026 TatD related DNase INQ48_RS15870 PF09115 DNA polymerase III, delta subunit, C terminal INQ48_RS15875 PF02223 Thymidylate kinase INQ48_RS15880 PF02618 YceG-like family INQ48_RS15885 PF01571 Aminomethyltransferase folate-binding domain INQ48_RS15895 PF13673 Acetyltransferase (GNAT) domain INQ48_RS15900 PF07859 alpha/beta hydrolase fold INQ48_RS15905 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS15910 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS15915 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS15915 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS15950 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS15960 PF01850 PIN domain INQ48_RS15970 PF16921 Tex protein YqgF-like domain INQ48_RS15970 PF09371 Tex-like protein N-terminal domain INQ48_RS15970 PF17674 HHH domain INQ48_RS15970 PF00575 S1 RNA binding domain INQ48_RS15990 PF01554 MatE INQ48_RS16000 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS16000 PF00672 HAMP domain INQ48_RS16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS16005 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS16005 PF00072 Response regulator receiver domain INQ48_RS16010 PF00326 Prolyl oligopeptidase family INQ48_RS16015 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS16015 PF00593 TonB dependent receptor INQ48_RS16020 PF04773 FecR protein INQ48_RS16020 PF16220 Domain of unknown function (DUF4880) INQ48_RS16025 PF04542 Sigma-70 region 2 INQ48_RS16025 PF08281 Sigma-70, region 4 INQ48_RS16030 PF04909 Amidohydrolase INQ48_RS16035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS16035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS16035 PF01842 ACT domain INQ48_RS16040 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS16045 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS16045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS16050 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS16055 PF04607 Region found in RelA / SpoT proteins INQ48_RS16060 PF07690 Major Facilitator Superfamily INQ48_RS16070 PF02470 MlaD protein INQ48_RS16075 PF04403 Paraquat-inducible protein A INQ48_RS16080 PF04403 Paraquat-inducible protein A INQ48_RS16085 PF07690 Major Facilitator Superfamily INQ48_RS16090 PF07690 Major Facilitator Superfamily INQ48_RS16095 PF00296 Luciferase-like monooxygenase INQ48_RS16110 PF07690 Major Facilitator Superfamily INQ48_RS16125 PF07690 Major Facilitator Superfamily INQ48_RS16130 PF03466 LysR substrate binding domain INQ48_RS16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS16145 PF00175 Oxidoreductase NAD-binding domain INQ48_RS16145 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS16145 PF00970 Oxidoreductase FAD-binding domain INQ48_RS16150 PF00155 Aminotransferase class I and II INQ48_RS16150 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS16155 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ48_RS16155 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ48_RS16165 PF13183 4Fe-4S dicluster domain INQ48_RS16165 PF01565 FAD binding domain INQ48_RS16165 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS16170 PF07729 FCD domain INQ48_RS16170 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS16175 PF00266 Aminotransferase class-V INQ48_RS16180 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS16190 PF03466 LysR substrate binding domain INQ48_RS16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS16195 PF07690 Major Facilitator Superfamily INQ48_RS16200 PF00248 Aldo/keto reductase family INQ48_RS16230 PF07690 Major Facilitator Superfamily INQ48_RS16235 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS16235 PF00563 EAL domain INQ48_RS16235 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS16240 PF02525 Flavodoxin-like fold INQ48_RS16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS16245 PF03466 LysR substrate binding domain INQ48_RS16255 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS16265 PF00106 short chain dehydrogenase INQ48_RS16280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS16280 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS16280 PF18158 Adaptive response protein AidB N-terminal domain INQ48_RS16285 PF00107 Zinc-binding dehydrogenase INQ48_RS16285 PF16884 N-terminal domain of oxidoreductase INQ48_RS16310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS16310 PF12806 Acetyl-CoA dehydrogenase C-terminal like INQ48_RS16310 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS16310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS16315 PF02803 Thiolase, C-terminal domain INQ48_RS16315 PF00108 Thiolase, N-terminal domain INQ48_RS16320 PF01546 Peptidase family M20/M25/M40 INQ48_RS16320 PF07687 Peptidase dimerisation domain INQ48_RS16325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS16325 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS16325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS16330 PF00005 ABC transporter INQ48_RS16335 PF00005 ABC transporter INQ48_RS16335 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS16345 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS16360 PF00501 AMP-binding enzyme INQ48_RS16360 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS16365 PF00135 Carboxylesterase family INQ48_RS16375 PF02696 Uncharacterized ACR, YdiU/UPF0061 family INQ48_RS16380 PF01641 SelR domain INQ48_RS16385 PF04279 Intracellular septation protein A INQ48_RS16400 PF12833 Helix-turn-helix domain INQ48_RS16400 PF14525 AraC-binding-like domain INQ48_RS16405 PF14760 Rnk N-terminus INQ48_RS16405 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ48_RS16410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain INQ48_RS16410 PF02769 AIR synthase related protein, C-terminal domain INQ48_RS16410 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal INQ48_RS16415 PF00557 Metallopeptidase family M24 INQ48_RS16420 PF08335 GlnD PII-uridylyltransferase INQ48_RS16420 PF01909 Nucleotidyltransferase domain INQ48_RS16420 PF01966 HD domain INQ48_RS16425 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS16425 PF13185 GAF domain INQ48_RS16430 PF08447 PAS fold INQ48_RS16430 PF00563 EAL domain INQ48_RS16430 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS16430 PF05231 MASE1 INQ48_RS16430 PF13426 PAS domain INQ48_RS16430 PF08448 PAS fold INQ48_RS16445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ48_RS16450 PF03552 Cellulose synthase INQ48_RS16450 PF00535 Glycosyl transferase family 2 INQ48_RS16450 PF07238 PilZ domain INQ48_RS16455 PF03170 Bacterial cellulose synthase subunit INQ48_RS16460 PF01270 Glycosyl hydrolases family 8 INQ48_RS16465 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) INQ48_RS16470 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS16470 PF00563 EAL domain INQ48_RS16470 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS16480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ48_RS16480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ48_RS16480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ48_RS16480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ48_RS16485 PF03479 Plants and Prokaryotes Conserved (PCC) domain INQ48_RS16485 PF12804 MobA-like NTP transferase domain INQ48_RS16485 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS16490 PF00248 Aldo/keto reductase family INQ48_RS16500 PF01381 Helix-turn-helix INQ48_RS16510 PF00474 Sodium:solute symporter family INQ48_RS16515 PF00742 Homoserine dehydrogenase INQ48_RS16515 PF03447 Homoserine dehydrogenase, NAD binding domain INQ48_RS16515 PF01842 ACT domain INQ48_RS16520 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS16525 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS16530 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS16540 PF01327 Polypeptide deformylase INQ48_RS16550 PF01653 NAD-dependent DNA ligase adenylation domain INQ48_RS16550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain INQ48_RS16550 PF00533 BRCA1 C Terminus (BRCT) domain INQ48_RS16550 PF03120 NAD-dependent DNA ligase OB-fold domain INQ48_RS16550 PF12826 Helix-hairpin-helix motif INQ48_RS16560 PF02463 RecF/RecN/SMC N terminal domain INQ48_RS16560 PF06470 SMC proteins Flexible Hinge Domain INQ48_RS16575 PF07804 HipA-like C-terminal domain INQ48_RS16575 PF13657 HipA N-terminal domain INQ48_RS16605 PF01522 Polysaccharide deacetylase INQ48_RS16605 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain INQ48_RS16625 PF07977 FabA-like domain INQ48_RS16640 PF05872 Bacterial protein of unknown function (DUF853) INQ48_RS16645 PF00027 Cyclic nucleotide-binding domain INQ48_RS16645 PF13545 Crp-like helix-turn-helix domain INQ48_RS16660 PF08281 Sigma-70, region 4 INQ48_RS16660 PF04542 Sigma-70 region 2 INQ48_RS16680 PF01774 UreD urease accessory protein INQ48_RS16690 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS16695 PF01048 Phosphorylase superfamily INQ48_RS16705 PF00005 ABC transporter INQ48_RS16710 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS16715 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS16735 PF07969 Amidohydrolase family INQ48_RS16740 PF00135 Carboxylesterase family INQ48_RS16745 PF02146 Sir2 family INQ48_RS16750 PF00664 ABC transporter transmembrane region INQ48_RS16750 PF00005 ABC transporter INQ48_RS16760 PF00929 Exonuclease INQ48_RS16760 PF08411 Exonuclease C-terminal INQ48_RS16765 PF13396 Phospholipase_D-nuclease N-terminal INQ48_RS16765 PF13091 PLD-like domain INQ48_RS16770 PF02861 Clp amino terminal domain, pathogenicity island component INQ48_RS16770 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS16770 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS16770 PF17871 AAA lid domain INQ48_RS16770 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS16775 PF02617 ATP-dependent Clp protease adaptor protein ClpS INQ48_RS16805 PF06744 Type VI secretion protein IcmF C-terminal INQ48_RS16805 PF14331 ImcF-related N-terminal domain INQ48_RS16805 PF06761 Intracellular multiplication and human macrophage-killing INQ48_RS16810 PF05736 OprF membrane domain INQ48_RS16810 PF00691 OmpA family INQ48_RS16820 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE INQ48_RS16835 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath INQ48_RS16840 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 INQ48_RS16845 PF17871 AAA lid domain INQ48_RS16845 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS16845 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS16845 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS16850 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS16870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain INQ48_RS16870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain INQ48_RS16875 PF02601 Exonuclease VII, large subunit INQ48_RS16875 PF13742 OB-fold nucleic acid binding domain INQ48_RS16880 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS16885 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS16890 PF02606 Tetraacyldisaccharide-1-P 4'-kinase INQ48_RS16895 PF03966 Trm112p-like protein INQ48_RS16900 PF02348 Cytidylyltransferase INQ48_RS16910 PF03527 RHS protein INQ48_RS16910 PF05593 RHS Repeat INQ48_RS16920 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS16920 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS16925 PF05191 Adenylate kinase, active site lid INQ48_RS16930 PF00710 Asparaginase, N-terminal INQ48_RS16930 PF17763 Glutaminase/Asparaginase C-terminal domain INQ48_RS16935 PF01726 LexA DNA binding domain INQ48_RS16935 PF00717 Peptidase S24-like INQ48_RS16945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS16945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS16950 PF07690 Major Facilitator Superfamily INQ48_RS16955 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain INQ48_RS16955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS16955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS16960 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS16965 PF00027 Cyclic nucleotide-binding domain INQ48_RS16965 PF13545 Crp-like helix-turn-helix domain INQ48_RS16975 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS16975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS16975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS16985 PF00583 Acetyltransferase (GNAT) family INQ48_RS16990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ48_RS16990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ48_RS16990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ48_RS16990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ48_RS16995 PF00809 Pterin binding enzyme INQ48_RS17000 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS17000 PF17862 AAA+ lid domain INQ48_RS17000 PF06480 FtsH Extracellular INQ48_RS17000 PF01434 Peptidase family M41 INQ48_RS17005 PF01728 FtsJ-like methyltransferase INQ48_RS17010 PF01985 CRS1 / YhbY (CRM) domain INQ48_RS17025 PF03449 Transcription elongation factor, N-terminal INQ48_RS17025 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ48_RS17035 PF02142 MGS-like domain INQ48_RS17035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS17035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain INQ48_RS17040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INQ48_RS17040 PF00117 Glutamine amidotransferase class-I INQ48_RS17045 PF08032 RNA 2'-O ribose methyltransferase substrate binding INQ48_RS17045 PF00588 SpoU rRNA Methylase family INQ48_RS17050 PF01351 Ribonuclease HII INQ48_RS17055 PF02684 Lipid-A-disaccharide synthetase INQ48_RS17060 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS17060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 INQ48_RS17065 PF07977 FabA-like domain INQ48_RS17070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD INQ48_RS17070 PF14602 Hexapeptide repeat of succinyl-transferase INQ48_RS17070 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS17080 PF01103 Surface antigen INQ48_RS17080 PF07244 Surface antigen variable number repeat INQ48_RS17085 PF17820 PDZ domain INQ48_RS17085 PF02163 Peptidase family M50 INQ48_RS17090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase INQ48_RS17090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain INQ48_RS17090 PF13288 DXP reductoisomerase C-terminal domain INQ48_RS17100 PF01255 Putative undecaprenyl diphosphate synthase INQ48_RS17105 PF01765 Ribosome recycling factor INQ48_RS17110 PF00696 Amino acid kinase family INQ48_RS17115 PF00889 Elongation factor TS INQ48_RS17120 PF00318 Ribosomal protein S2 INQ48_RS17125 PF01266 FAD dependent oxidoreductase INQ48_RS17135 PF01256 Carbohydrate kinase INQ48_RS17135 PF03853 YjeF-related protein N-terminus INQ48_RS17145 PF08461 Ribonuclease R winged-helix domain INQ48_RS17145 PF00575 S1 RNA binding domain INQ48_RS17145 PF00773 RNB domain INQ48_RS17145 PF17876 Cold shock domain INQ48_RS17145 PF08206 Ribonuclease B OB domain INQ48_RS17160 PF04055 Radical SAM superfamily INQ48_RS17160 PF00919 Uncharacterized protein family UPF0004 INQ48_RS17160 PF18693 TRAM domain INQ48_RS17165 PF05233 PHB accumulation regulatory domain INQ48_RS17165 PF07879 PHB/PHA accumulation regulator DNA-binding domain INQ48_RS17180 PF04607 Region found in RelA / SpoT proteins INQ48_RS17180 PF02824 TGS domain INQ48_RS17180 PF13291 ACT domain INQ48_RS17190 PF00106 short chain dehydrogenase INQ48_RS17205 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS17205 PF00072 Response regulator receiver domain INQ48_RS17210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS17210 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS17210 PF00672 HAMP domain INQ48_RS17215 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase INQ48_RS17215 PF02542 YgbB family INQ48_RS17220 PF02542 YgbB family INQ48_RS17220 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase INQ48_RS17225 PF02559 CarD-like/TRCF domain INQ48_RS17225 PF03461 TRCF domain INQ48_RS17225 PF17757 UvrB interaction domain INQ48_RS17225 PF00271 Helicase conserved C-terminal domain INQ48_RS17225 PF00270 DEAD/DEAH box helicase INQ48_RS17235 PF01850 PIN domain INQ48_RS17255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS17255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS17255 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS17260 PF02515 CoA-transferase family III INQ48_RS17265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS17265 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS17265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS17270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS17270 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS17270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS17275 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS17280 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS17300 PF00155 Aminotransferase class I and II INQ48_RS17305 PF10576 Iron-sulfur binding domain of endonuclease III INQ48_RS17305 PF00633 Helix-hairpin-helix motif INQ48_RS17305 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ48_RS17315 PF02654 Cobalamin-5-phosphate synthase INQ48_RS17320 PF02277 Phosphoribosyltransferase INQ48_RS17325 PF07685 CobB/CobQ-like glutamine amidotransferase domain INQ48_RS17325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ48_RS17345 PF02321 Outer membrane efflux protein INQ48_RS17350 PF00873 AcrB/AcrD/AcrF family INQ48_RS17355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS17355 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS17360 PF07859 alpha/beta hydrolase fold INQ48_RS17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS17365 PF03466 LysR substrate binding domain INQ48_RS17380 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS17395 PF04172 LrgB-like family INQ48_RS17410 PF03186 CobD/Cbib protein INQ48_RS17415 PF02514 CobN/Magnesium Chelatase INQ48_RS17430 PF00881 Nitroreductase family INQ48_RS17435 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP INQ48_RS17435 PF12557 Cob(I)alamin adenosyltransferase N terminal INQ48_RS17440 PF00005 ABC transporter INQ48_RS17445 PF01032 FecCD transport family INQ48_RS17455 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase INQ48_RS17460 PF07685 CobB/CobQ-like glutamine amidotransferase domain INQ48_RS17460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain INQ48_RS17465 PF00593 TonB dependent receptor INQ48_RS17465 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS17470 PF00654 Voltage gated chloride channel INQ48_RS17485 PF01925 Sulfite exporter TauE/SafE INQ48_RS17490 PF01494 FAD binding domain INQ48_RS17500 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS17505 PF03466 LysR substrate binding domain INQ48_RS17510 PF00561 alpha/beta hydrolase fold INQ48_RS17515 PF12833 Helix-turn-helix domain INQ48_RS17520 PF00795 Carbon-nitrogen hydrolase INQ48_RS17530 PF00144 Beta-lactamase INQ48_RS17530 PF11954 Domain of unknown function (DUF3471) INQ48_RS17535 PF00501 AMP-binding enzyme INQ48_RS17535 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS17540 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS17545 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS17555 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS17555 PF07729 FCD domain INQ48_RS17560 PF01790 Prolipoprotein diacylglyceryl transferase INQ48_RS17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS17575 PF03466 LysR substrate binding domain INQ48_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS17580 PF03466 LysR substrate binding domain INQ48_RS17585 PF00920 Dehydratase family INQ48_RS17605 PF00034 Cytochrome c INQ48_RS17615 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS17615 PF00501 AMP-binding enzyme INQ48_RS17615 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ48_RS17620 PF03350 Uncharacterized protein family, UPF0114 INQ48_RS17625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS17625 PF03466 LysR substrate binding domain INQ48_RS17630 PF13460 NAD(P)H-binding INQ48_RS17635 PF00206 Lyase INQ48_RS17635 PF10415 Fumarase C C-terminus INQ48_RS17640 PF00005 ABC transporter INQ48_RS17640 PF00571 CBS domain INQ48_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS17650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ48_RS17660 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS17700 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS17700 PF05362 Lon protease (S16) C-terminal proteolytic domain INQ48_RS17700 PF02190 ATP-dependent protease La (LON) substrate-binding domain INQ48_RS17705 PF06689 ClpX C4-type zinc finger INQ48_RS17705 PF07724 AAA domain (Cdc48 subfamily) INQ48_RS17705 PF10431 C-terminal, D2-small domain, of ClpB protein INQ48_RS17710 PF00574 Clp protease INQ48_RS17715 PF05697 Bacterial trigger factor protein (TF) INQ48_RS17715 PF05698 Bacterial trigger factor protein (TF) C-terminus INQ48_RS17715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS17725 PF00873 AcrB/AcrD/AcrF family INQ48_RS17730 PF13533 Biotin-lipoyl like INQ48_RS17735 PF02705 K+ potassium transporter INQ48_RS17750 PF01593 Flavin containing amine oxidoreductase INQ48_RS17760 PF01810 LysE type translocator INQ48_RS17770 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS17775 PF00762 Ferrochelatase INQ48_RS17780 PF02683 Cytochrome C biogenesis protein transmembrane region INQ48_RS17780 PF00578 AhpC/TSA family INQ48_RS17780 PF17991 Thioredoxin like C-terminal domain INQ48_RS17790 PF12697 Alpha/beta hydrolase family INQ48_RS17805 PF00005 ABC transporter INQ48_RS17810 PF00005 ABC transporter INQ48_RS17815 PF10503 Esterase PHB depolymerase INQ48_RS17845 PF02954 Bacterial regulatory protein, Fis family INQ48_RS17845 PF00072 Response regulator receiver domain INQ48_RS17845 PF00158 Sigma-54 interaction domain INQ48_RS17855 PF02321 Outer membrane efflux protein INQ48_RS17865 PF00873 AcrB/AcrD/AcrF family INQ48_RS17870 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS17870 PF00593 TonB dependent receptor INQ48_RS17875 PF16220 Domain of unknown function (DUF4880) INQ48_RS17875 PF04773 FecR protein INQ48_RS17880 PF08281 Sigma-70, region 4 INQ48_RS17880 PF04542 Sigma-70 region 2 INQ48_RS17885 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS17900 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS17900 PF00072 Response regulator receiver domain INQ48_RS17905 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS17905 PF08521 Two-component sensor kinase N-terminal INQ48_RS17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS17910 PF01479 S4 domain INQ48_RS17915 PF03976 Polyphosphate kinase 2 (PPK2) INQ48_RS17930 PF00005 ABC transporter INQ48_RS17930 PF00664 ABC transporter transmembrane region INQ48_RS17935 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS17955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS17955 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS17955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS18140 PF01555 DNA methylase INQ48_RS18200 PF06630 Enterobacterial exodeoxyribonuclease VIII INQ48_RS18200 PF12684 PDDEXK-like domain of unknown function (DUF3799) INQ48_RS18285 PF00589 Phage integrase family INQ48_RS18285 PF13356 Arm DNA-binding domain INQ48_RS18295 PF13840 ACT domain INQ48_RS18295 PF01842 ACT domain INQ48_RS18295 PF00696 Amino acid kinase family INQ48_RS18300 PF09179 TilS substrate binding domain INQ48_RS18300 PF01171 PP-loop family INQ48_RS18305 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit INQ48_RS18310 PF06029 AlkA N-terminal domain INQ48_RS18310 PF12833 Helix-turn-helix domain INQ48_RS18310 PF02805 Metal binding domain of Ada INQ48_RS18310 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ48_RS18315 PF09190 DALR domain INQ48_RS18315 PF01406 tRNA synthetases class I (C) catalytic domain INQ48_RS18325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INQ48_RS18330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD INQ48_RS18335 PF00149 Calcineurin-like phosphoesterase INQ48_RS18340 PF06167 Glucose-regulated metallo-peptidase M90 INQ48_RS18345 PF01494 FAD binding domain INQ48_RS18360 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain INQ48_RS18360 PF01464 Transglycosylase SLT domain INQ48_RS18365 PF00464 Serine hydroxymethyltransferase INQ48_RS18370 PF03477 ATP cone domain INQ48_RS18380 PF14245 Type IV pilin PilA INQ48_RS18380 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS18385 PF05567 Neisseria PilC beta-propeller domain INQ48_RS18405 PF01872 RibD C-terminal domain INQ48_RS18405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ48_RS18410 PF00677 Lumazine binding domain INQ48_RS18415 PF00925 GTP cyclohydrolase II INQ48_RS18415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase INQ48_RS18420 PF00885 6,7-dimethyl-8-ribityllumazine synthase INQ48_RS18425 PF01029 NusB family INQ48_RS18430 PF00155 Aminotransferase class I and II INQ48_RS18435 PF03061 Thioesterase superfamily INQ48_RS18440 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS18445 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS18455 PF03717 Penicillin-binding Protein dimerisation domain INQ48_RS18455 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS18465 PF13086 AAA domain INQ48_RS18465 PF13087 AAA domain INQ48_RS18465 PF13195 Protein of unknown function (DUF4011) INQ48_RS18465 PF13195 Protein of unknown function (DUF4011) INQ48_RS18465 PF13087 AAA domain INQ48_RS18465 PF13086 AAA domain INQ48_RS18475 PF01336 OB-fold nucleic acid binding domain INQ48_RS18475 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ48_RS18475 PF14579 Helix-hairpin-helix motif INQ48_RS18475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ48_RS18475 PF02811 PHP domain INQ48_RS18480 PF17773 UPF0176 acylphosphatase like domain INQ48_RS18480 PF00581 Rhodanese-like domain INQ48_RS18485 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS18485 PF00072 Response regulator receiver domain INQ48_RS18490 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS18490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS18500 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS18515 PF02678 Pirin INQ48_RS18515 PF05726 Pirin C-terminal cupin domain INQ48_RS18520 PF03358 NADPH-dependent FMN reductase INQ48_RS18530 PF02678 Pirin INQ48_RS18530 PF17954 Quercetinase C-terminal cupin domain INQ48_RS18535 PF03466 LysR substrate binding domain INQ48_RS18535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18540 PF01266 FAD dependent oxidoreductase INQ48_RS18540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase INQ48_RS18545 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ48_RS18550 PF02390 Putative methyltransferase INQ48_RS18575 PF01965 DJ-1/PfpI family INQ48_RS18575 PF12833 Helix-turn-helix domain INQ48_RS18580 PF07690 Major Facilitator Superfamily INQ48_RS18580 PF00083 Sugar (and other) transporter INQ48_RS18585 PF03466 LysR substrate binding domain INQ48_RS18585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18595 PF07690 Major Facilitator Superfamily INQ48_RS18600 PF13545 Crp-like helix-turn-helix domain INQ48_RS18600 PF00027 Cyclic nucleotide-binding domain INQ48_RS18610 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS18615 PF01758 Sodium Bile acid symporter family INQ48_RS18620 PF03466 LysR substrate binding domain INQ48_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18625 PF03358 NADPH-dependent FMN reductase INQ48_RS18625 PF00890 FAD binding domain INQ48_RS18625 PF04205 FMN-binding domain INQ48_RS18635 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS18640 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18645 PF04909 Amidohydrolase INQ48_RS18650 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18655 PF01842 ACT domain INQ48_RS18655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS18655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS18660 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18665 PF14310 Fibronectin type III-like domain INQ48_RS18665 PF00933 Glycosyl hydrolase family 3 N terminal domain INQ48_RS18665 PF01915 Glycosyl hydrolase family 3 C-terminal domain INQ48_RS18675 PF13018 Extended Signal Peptide of Type V secretion system INQ48_RS18675 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ48_RS18675 PF05658 Head domain of trimeric autotransporter adhesin INQ48_RS18675 PF03895 YadA-like membrane anchor domain INQ48_RS18680 PF05506 Domain of unknown function (DUF756) INQ48_RS18680 PF04185 Phosphoesterase family INQ48_RS18690 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS18695 PF00005 ABC transporter INQ48_RS18705 PF18407 GCN5-related N-acetyltransferase like domain INQ48_RS18705 PF13344 Haloacid dehalogenase-like hydrolase INQ48_RS18710 PF01418 Helix-turn-helix domain, rpiR family INQ48_RS18710 PF01380 SIS domain INQ48_RS18715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ48_RS18715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ48_RS18720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18720 PF03466 LysR substrate binding domain INQ48_RS18725 PF00155 Aminotransferase class I and II INQ48_RS18730 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18735 PF03737 Aldolase/RraA INQ48_RS18750 PF03069 Acetamidase/Formamidase family INQ48_RS18755 PF00005 ABC transporter INQ48_RS18760 PF00005 ABC transporter INQ48_RS18780 PF01627 Hpt domain INQ48_RS18780 PF00072 Response regulator receiver domain INQ48_RS18780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS18780 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS18785 PF00072 Response regulator receiver domain INQ48_RS18790 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INQ48_RS18790 PF00437 Type II/IV secretion system protein INQ48_RS18800 PF00155 Aminotransferase class I and II INQ48_RS18805 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS18810 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS18815 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS18820 PF00005 ABC transporter INQ48_RS18825 PF03737 Aldolase/RraA INQ48_RS18830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS18830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS18830 PF01842 ACT domain INQ48_RS18835 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18840 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS18840 PF08448 PAS fold INQ48_RS18845 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18855 PF03466 LysR substrate binding domain INQ48_RS18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18880 PF11838 ERAP1-like C-terminal domain INQ48_RS18880 PF01433 Peptidase family M1 domain INQ48_RS18885 PF00364 Biotin-requiring enzyme INQ48_RS18885 PF00561 alpha/beta hydrolase fold INQ48_RS18890 PF00072 Response regulator receiver domain INQ48_RS18890 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS18895 PF08521 Two-component sensor kinase N-terminal INQ48_RS18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS18895 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS18905 PF03466 LysR substrate binding domain INQ48_RS18910 PF01042 Endoribonuclease L-PSP INQ48_RS18915 PF01810 LysE type translocator INQ48_RS18920 PF00072 Response regulator receiver domain INQ48_RS18920 PF13426 PAS domain INQ48_RS18920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS18925 PF00072 Response regulator receiver domain INQ48_RS18930 PF00360 Phytochrome region INQ48_RS18930 PF01590 GAF domain INQ48_RS18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS18930 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS18930 PF08446 PAS fold INQ48_RS18940 PF02954 Bacterial regulatory protein, Fis family INQ48_RS18940 PF00072 Response regulator receiver domain INQ48_RS18950 PF07690 Major Facilitator Superfamily INQ48_RS18955 PF13609 Gram-negative porin INQ48_RS18960 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS18960 PF00175 Oxidoreductase NAD-binding domain INQ48_RS18965 PF00355 Rieske [2Fe-2S] domain INQ48_RS18975 PF01494 FAD binding domain INQ48_RS18980 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS18990 PF00171 Aldehyde dehydrogenase family INQ48_RS18995 PF01958 Domain of unknown function DUF108 INQ48_RS18995 PF03447 Homoserine dehydrogenase, NAD binding domain INQ48_RS19000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS19000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS19000 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS19005 PF00106 short chain dehydrogenase INQ48_RS19010 PF09339 IclR helix-turn-helix domain INQ48_RS19010 PF01614 Bacterial transcriptional regulator INQ48_RS19030 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS19035 PF01266 FAD dependent oxidoreductase INQ48_RS19040 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS19040 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS19045 PF01411 tRNA synthetases class II (A) INQ48_RS19045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain INQ48_RS19045 PF02272 DHHA1 domain INQ48_RS19055 PF07690 Major Facilitator Superfamily INQ48_RS19085 PF07905 Purine catabolism regulatory protein-like family INQ48_RS19085 PF13556 PucR C-terminal helix-turn-helix domain INQ48_RS19100 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term INQ48_RS19100 PF12833 Helix-turn-helix domain INQ48_RS19135 PF14579 Helix-hairpin-helix motif INQ48_RS19135 PF02811 PHP domain INQ48_RS19135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ48_RS19135 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ48_RS19155 PF01323 DSBA-like thioredoxin domain INQ48_RS19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19160 PF03466 LysR substrate binding domain INQ48_RS19165 PF03466 LysR substrate binding domain INQ48_RS19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19170 PF01546 Peptidase family M20/M25/M40 INQ48_RS19170 PF07687 Peptidase dimerisation domain INQ48_RS19190 PF01292 Prokaryotic cytochrome b561 INQ48_RS19200 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase INQ48_RS19205 PF03466 LysR substrate binding domain INQ48_RS19205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19210 PF00005 ABC transporter INQ48_RS19210 PF00664 ABC transporter transmembrane region INQ48_RS19220 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS19225 PF05947 Type VI secretion system, TssF INQ48_RS19240 PF01926 50S ribosome-binding GTPase INQ48_RS19240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal INQ48_RS19245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS19245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS19250 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS19250 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS19255 PF01799 [2Fe-2S] binding domain INQ48_RS19255 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19265 PF03466 LysR substrate binding domain INQ48_RS19280 PF03006 Haemolysin-III related INQ48_RS19290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) INQ48_RS19315 PF04185 Phosphoesterase family INQ48_RS19315 PF05506 Domain of unknown function (DUF756) INQ48_RS19320 PF08220 DeoR-like helix-turn-helix domain INQ48_RS19320 PF00455 DeoR C terminal sensor domain INQ48_RS19325 PF00117 Glutamine amidotransferase class-I INQ48_RS19325 PF00958 GMP synthase C terminal domain INQ48_RS19325 PF02540 NAD synthase INQ48_RS19330 PF01066 CDP-alcohol phosphatidyltransferase INQ48_RS19340 PF01804 Penicillin amidase INQ48_RS19345 PF00106 short chain dehydrogenase INQ48_RS19345 PF00300 Histidine phosphatase superfamily (branch 1) INQ48_RS19350 PF01556 DnaJ C terminal domain INQ48_RS19350 PF00226 DnaJ domain INQ48_RS19360 PF00376 MerR family regulatory protein INQ48_RS19360 PF09278 MerR, DNA binding INQ48_RS19365 PF18339 RapA N-terminal Tudor like domain 1 INQ48_RS19365 PF18337 RapA N-terminal Tudor like domain INQ48_RS19365 PF00271 Helicase conserved C-terminal domain INQ48_RS19365 PF12137 RNA polymerase recycling family C-terminal INQ48_RS19365 PF00176 SNF2 family N-terminal domain INQ48_RS19380 PF07687 Peptidase dimerisation domain INQ48_RS19380 PF01546 Peptidase family M20/M25/M40 INQ48_RS19395 PF13180 PDZ domain INQ48_RS19400 PF13406 Transglycosylase SLT domain INQ48_RS19410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS19410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS19415 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS19420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS19420 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS19420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS19430 PF00171 Aldehyde dehydrogenase family INQ48_RS19435 PF03466 LysR substrate binding domain INQ48_RS19435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19440 PF03466 LysR substrate binding domain INQ48_RS19445 PF00701 Dihydrodipicolinate synthetase family INQ48_RS19460 PF13378 Enolase C-terminal domain-like INQ48_RS19465 PF00155 Aminotransferase class I and II INQ48_RS19470 PF02515 CoA-transferase family III INQ48_RS19475 PF01144 Coenzyme A transferase INQ48_RS19480 PF01144 Coenzyme A transferase INQ48_RS19485 PF00072 Response regulator receiver domain INQ48_RS19485 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS19505 PF00171 Aldehyde dehydrogenase family INQ48_RS19510 PF00158 Sigma-54 interaction domain INQ48_RS19510 PF02954 Bacterial regulatory protein, Fis family INQ48_RS19510 PF01590 GAF domain INQ48_RS19525 PF04349 Periplasmic glucan biosynthesis protein, MdoG INQ48_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19530 PF03466 LysR substrate binding domain INQ48_RS19540 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS19540 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase INQ48_RS19545 PF13520 Amino acid permease INQ48_RS19550 PF06751 Ethanolamine ammonia lyase large subunit (EutB) INQ48_RS19555 PF05985 Ethanolamine ammonia-lyase light chain (EutC) INQ48_RS19575 PF08019 Phosphoethanolamine transferase EptA/EptB INQ48_RS19575 PF00884 Sulfatase INQ48_RS19585 PF00072 Response regulator receiver domain INQ48_RS19585 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS19590 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS19590 PF08521 Two-component sensor kinase N-terminal INQ48_RS19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS19625 PF01968 Hydantoinase/oxoprolinase INQ48_RS19625 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS19630 PF07690 Major Facilitator Superfamily INQ48_RS19635 PF07286 Protein of unknown function (DUF1445) INQ48_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19640 PF03466 LysR substrate binding domain INQ48_RS19645 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS19650 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS19660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS19660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS19675 PF07690 Major Facilitator Superfamily INQ48_RS19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS19690 PF03466 LysR substrate binding domain INQ48_RS19705 PF01494 FAD binding domain INQ48_RS19710 PF01979 Amidohydrolase family INQ48_RS19715 PF07859 alpha/beta hydrolase fold INQ48_RS19720 PF08669 Glycine cleavage T-protein C-terminal barrel domain INQ48_RS19720 PF01571 Aminomethyltransferase folate-binding domain INQ48_RS19725 PF01597 Glycine cleavage H-protein INQ48_RS19730 PF02347 Glycine cleavage system P-protein INQ48_RS19740 PF00561 alpha/beta hydrolase fold INQ48_RS19755 PF03060 Nitronate monooxygenase INQ48_RS19785 PF00083 Sugar (and other) transporter INQ48_RS19785 PF07690 Major Facilitator Superfamily INQ48_RS19790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS19790 PF01261 Xylose isomerase-like TIM barrel INQ48_RS19800 PF07690 Major Facilitator Superfamily INQ48_RS19810 PF10397 Adenylosuccinate lyase C-terminus INQ48_RS19810 PF00206 Lyase INQ48_RS19815 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS19815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS19815 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS19820 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS19820 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS19820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS19825 PF09339 IclR helix-turn-helix domain INQ48_RS19825 PF01614 Bacterial transcriptional regulator INQ48_RS19830 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS19835 PF00206 Lyase INQ48_RS19835 PF10415 Fumarase C C-terminus INQ48_RS19840 PF00375 Sodium:dicarboxylate symporter family INQ48_RS19845 PF00206 Lyase INQ48_RS19845 PF10397 Adenylosuccinate lyase C-terminus INQ48_RS19850 PF07702 UTRA domain INQ48_RS19850 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS19865 PF12951 Passenger-associated-transport-repeat INQ48_RS19885 PF00072 Response regulator receiver domain INQ48_RS19885 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS19890 PF00672 HAMP domain INQ48_RS19890 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS19890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS19890 PF01627 Hpt domain INQ48_RS19890 PF00072 Response regulator receiver domain INQ48_RS19895 PF12951 Passenger-associated-transport-repeat INQ48_RS19895 PF12951 Passenger-associated-transport-repeat INQ48_RS19905 PF00072 Response regulator receiver domain INQ48_RS19905 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS19910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS19910 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS19910 PF00672 HAMP domain INQ48_RS19915 PF12951 Passenger-associated-transport-repeat INQ48_RS19915 PF12951 Passenger-associated-transport-repeat INQ48_RS19915 PF12951 Passenger-associated-transport-repeat INQ48_RS19920 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS19925 PF00072 Response regulator receiver domain INQ48_RS19925 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS19930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS19930 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS19950 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS19955 PF03972 MmgE/PrpD family INQ48_RS19965 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS19965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS19965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS19975 PF02515 CoA-transferase family III INQ48_RS19980 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS19985 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS19990 PF12833 Helix-turn-helix domain INQ48_RS19990 PF02311 AraC-like ligand binding domain INQ48_RS19995 PF01979 Amidohydrolase family INQ48_RS20000 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ48_RS20000 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20010 PF08402 TOBE domain INQ48_RS20010 PF00005 ABC transporter INQ48_RS20020 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20025 PF03942 DTW domain INQ48_RS20035 PF00005 ABC transporter INQ48_RS20040 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS20045 PF13407 Periplasmic binding protein domain INQ48_RS20050 PF06826 Predicted Permease Membrane Region INQ48_RS20050 PF02080 TrkA-C domain INQ48_RS20055 PF02080 TrkA-C domain INQ48_RS20055 PF06826 Predicted Permease Membrane Region INQ48_RS20060 PF00155 Aminotransferase class I and II INQ48_RS20075 PF01264 Chorismate synthase INQ48_RS20085 PF07690 Major Facilitator Superfamily INQ48_RS20095 PF01022 Bacterial regulatory protein, arsR family INQ48_RS20115 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS20130 PF13452 N-terminal half of MaoC dehydratase INQ48_RS20140 PF00501 AMP-binding enzyme INQ48_RS20140 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS20155 PF08173 Membrane bound YbgT-like protein INQ48_RS20160 PF02322 Cytochrome bd terminal oxidase subunit II INQ48_RS20165 PF01654 Cytochrome bd terminal oxidase subunit I INQ48_RS20170 PF00005 ABC transporter INQ48_RS20170 PF00664 ABC transporter transmembrane region INQ48_RS20175 PF00664 ABC transporter transmembrane region INQ48_RS20175 PF00005 ABC transporter INQ48_RS20190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS20190 PF12806 Acetyl-CoA dehydrogenase C-terminal like INQ48_RS20190 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS20190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS20195 PF01012 Electron transfer flavoprotein domain INQ48_RS20195 PF00766 Electron transfer flavoprotein FAD-binding domain INQ48_RS20200 PF01012 Electron transfer flavoprotein domain INQ48_RS20205 PF12795 Mechanosensitive ion channel porin domain INQ48_RS20205 PF00924 Mechanosensitive ion channel INQ48_RS20205 PF12794 Mechanosensitive ion channel inner membrane domain 1 INQ48_RS20210 PF00850 Histone deacetylase domain INQ48_RS20215 PF07726 ATPase family associated with various cellular activities (AAA) INQ48_RS20215 PF17863 AAA lid domain INQ48_RS20230 PF13559 Domain of unknown function (DUF4129) INQ48_RS20230 PF01841 Transglutaminase-like superfamily INQ48_RS20230 PF11992 Domain of unknown function (DUF3488) INQ48_RS20250 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS20250 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS20265 PF00005 ABC transporter INQ48_RS20280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III INQ48_RS20280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal INQ48_RS20300 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20305 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20310 PF00005 ABC transporter INQ48_RS20310 PF17912 MalK OB fold domain INQ48_RS20315 PF00005 ABC transporter INQ48_RS20315 PF17912 MalK OB fold domain INQ48_RS20320 PF16901 C-terminal domain of alpha-glycerophosphate oxidase INQ48_RS20320 PF01266 FAD dependent oxidoreductase INQ48_RS20325 PF00455 DeoR C terminal sensor domain INQ48_RS20325 PF08220 DeoR-like helix-turn-helix domain INQ48_RS20330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS20330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS20345 PF08019 Phosphoethanolamine transferase EptA/EptB INQ48_RS20345 PF00884 Sulfatase INQ48_RS20355 PF14403 Circularly permuted ATP-grasp type 2 INQ48_RS20360 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS20370 PF00589 Phage integrase family INQ48_RS20380 PF00182 Chitinase class I INQ48_RS20480 PF00574 Clp protease INQ48_RS20580 PF01555 DNA methylase INQ48_RS20655 PF01966 HD domain INQ48_RS20705 PF03772 Competence protein INQ48_RS20705 PF00753 Metallo-beta-lactamase superfamily INQ48_RS20715 PF04168 A predicted alpha-helical domain with a conserved ER motif. INQ48_RS20715 PF14403 Circularly permuted ATP-grasp type 2 INQ48_RS20720 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS20725 PF01841 Transglutaminase-like superfamily INQ48_RS20725 PF08379 Bacterial transglutaminase-like N-terminal region INQ48_RS20735 PF00034 Cytochrome c INQ48_RS20755 PF00732 GMC oxidoreductase INQ48_RS20755 PF05199 GMC oxidoreductase INQ48_RS20760 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS20765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS20765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS20770 PF00294 pfkB family carbohydrate kinase INQ48_RS20780 PF00005 ABC transporter INQ48_RS20785 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS20790 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20795 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS20810 PF00857 Isochorismatase family INQ48_RS20815 PF12706 Beta-lactamase superfamily domain INQ48_RS20825 PF00521 DNA gyrase/topoisomerase IV, subunit A INQ48_RS20835 PF01464 Transglycosylase SLT domain INQ48_RS20840 PF00986 DNA gyrase B subunit, carboxyl terminus INQ48_RS20840 PF00204 DNA gyrase B INQ48_RS20840 PF01751 Toprim domain INQ48_RS20840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS20860 PF00701 Dihydrodipicolinate synthetase family INQ48_RS20865 PF06804 NlpB/DapX lipoprotein INQ48_RS20870 PF00753 Metallo-beta-lactamase superfamily INQ48_RS20885 PF08007 Cupin superfamily protein INQ48_RS20890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS20900 PF00692 dUTPase INQ48_RS20910 PF04127 DNA / pantothenate metabolism flavoprotein INQ48_RS20910 PF02441 Flavoprotein INQ48_RS20915 PF06418 CTP synthase N-terminus INQ48_RS20915 PF00117 Glutamine amidotransferase class-I INQ48_RS20925 PF03952 Enolase, N-terminal domain INQ48_RS20925 PF00113 Enolase, C-terminal TIM barrel domain INQ48_RS20930 PF04977 Septum formation initiator INQ48_RS20935 PF04973 Nicotinamide mononucleotide transporter INQ48_RS20950 PF12833 Helix-turn-helix domain INQ48_RS20965 PF01430 Hsp33 protein INQ48_RS20970 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS20975 PF04305 Protein of unknown function (DUF455) INQ48_RS20985 PF02803 Thiolase, C-terminal domain INQ48_RS20985 PF00108 Thiolase, N-terminal domain INQ48_RS20995 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21000 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21005 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21010 PF00005 ABC transporter INQ48_RS21020 PF03466 LysR substrate binding domain INQ48_RS21020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS21025 PF00589 Phage integrase family INQ48_RS21025 PF02899 Phage integrase, N-terminal SAM-like domain INQ48_RS21030 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21040 PF01717 Cobalamin-independent synthase, Catalytic domain INQ48_RS21040 PF08267 Cobalamin-independent synthase, N-terminal domain INQ48_RS21050 PF03358 NADPH-dependent FMN reductase INQ48_RS21055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS21055 PF03466 LysR substrate binding domain INQ48_RS21060 PF08331 Domain of unknown function (DUF1730) INQ48_RS21065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE INQ48_RS21070 PF01520 N-acetylmuramoyl-L-alanine amidase INQ48_RS21070 PF11741 AMIN domain INQ48_RS21080 PF09335 SNARE associated Golgi protein INQ48_RS21085 PF01738 Dienelactone hydrolase family INQ48_RS21090 PF03466 LysR substrate binding domain INQ48_RS21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS21095 PF07690 Major Facilitator Superfamily INQ48_RS21100 PF00920 Dehydratase family INQ48_RS21105 PF08676 MutL C terminal dimerisation domain INQ48_RS21105 PF01119 DNA mismatch repair protein, C-terminal domain INQ48_RS21115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS21120 PF01799 [2Fe-2S] binding domain INQ48_RS21120 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS21125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS21130 PF12833 Helix-turn-helix domain INQ48_RS21130 PF06719 AraC-type transcriptional regulator N-terminus INQ48_RS21140 PF00005 ABC transporter INQ48_RS21150 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS21155 PF00873 AcrB/AcrD/AcrF family INQ48_RS21160 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS21160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS21165 PF02321 Outer membrane efflux protein INQ48_RS21175 PF05721 Phytanoyl-CoA dioxygenase (PhyH) INQ48_RS21205 PF03747 ADP-ribosylglycohydrolase INQ48_RS21210 PF01037 Lrp/AsnC ligand binding domain INQ48_RS21215 PF00266 Aminotransferase class-V INQ48_RS21225 PF00144 Beta-lactamase INQ48_RS21240 PF01804 Penicillin amidase INQ48_RS21255 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS21270 PF00005 ABC transporter INQ48_RS21275 PF00005 ABC transporter INQ48_RS21275 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS21280 PF00857 Isochorismatase family INQ48_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS21285 PF03466 LysR substrate binding domain INQ48_RS21290 PF07690 Major Facilitator Superfamily INQ48_RS21295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS21295 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS21300 PF02321 Outer membrane efflux protein INQ48_RS21305 PF01047 MarR family INQ48_RS21310 PF00005 ABC transporter INQ48_RS21310 PF00664 ABC transporter transmembrane region INQ48_RS21320 PF00293 NUDIX domain INQ48_RS21330 PF00361 Proton-conducting membrane transporter INQ48_RS21335 PF00361 Proton-conducting membrane transporter INQ48_RS21335 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus INQ48_RS21340 PF00361 Proton-conducting membrane transporter INQ48_RS21340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus INQ48_RS21345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L INQ48_RS21350 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 INQ48_RS21355 PF12838 4Fe-4S dicluster domain INQ48_RS21360 PF00146 NADH dehydrogenase INQ48_RS21365 PF00384 Molybdopterin oxidoreductase INQ48_RS21365 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal INQ48_RS21365 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region INQ48_RS21370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ48_RS21370 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region INQ48_RS21370 PF10531 SLBB domain INQ48_RS21380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit INQ48_RS21385 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit INQ48_RS21390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit INQ48_RS21395 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 INQ48_RS21405 PF03840 Preprotein translocase SecG subunit INQ48_RS21410 PF00121 Triosephosphate isomerase INQ48_RS21415 PF14765 Polyketide synthase dehydratase INQ48_RS21415 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS21415 PF00550 Phosphopantetheine attachment site INQ48_RS21415 PF00107 Zinc-binding dehydrogenase INQ48_RS21415 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS21415 PF00698 Acyl transferase domain INQ48_RS21415 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS21415 PF08659 KR domain INQ48_RS21415 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS21420 PF01138 3' exoribonuclease family, domain 1 INQ48_RS21420 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain INQ48_RS21420 PF03725 3' exoribonuclease family, domain 2 INQ48_RS21420 PF00575 S1 RNA binding domain INQ48_RS21420 PF00013 KH domain INQ48_RS21425 PF00312 Ribosomal protein S15 INQ48_RS21440 PF00155 Aminotransferase class I and II INQ48_RS21445 PF13458 Periplasmic binding protein INQ48_RS21455 PF00814 Glycoprotease family INQ48_RS21460 PF08376 Nitrate and nitrite sensing INQ48_RS21460 PF03861 ANTAR domain INQ48_RS21470 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21475 PF00005 ABC transporter INQ48_RS21480 PF00072 Response regulator receiver domain INQ48_RS21480 PF03861 ANTAR domain INQ48_RS21485 PF07690 Major Facilitator Superfamily INQ48_RS21490 PF03793 PASTA domain INQ48_RS21490 PF00069 Protein kinase domain INQ48_RS21500 PF01568 Molydopterin dinucleotide binding domain INQ48_RS21500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS21500 PF04324 BFD-like [2Fe-2S] binding domain INQ48_RS21500 PF00384 Molybdopterin oxidoreductase INQ48_RS21505 PF00591 Glycosyl transferase family, a/b domain INQ48_RS21505 PF02885 Glycosyl transferase family, helical bundle domain INQ48_RS21510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ48_RS21515 PF00005 ABC transporter INQ48_RS21515 PF08402 TOBE domain INQ48_RS21525 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21530 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21540 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family INQ48_RS21550 PF01165 Ribosomal protein S21 INQ48_RS21560 PF00293 NUDIX domain INQ48_RS21580 PF01758 Sodium Bile acid symporter family INQ48_RS21590 PF00106 short chain dehydrogenase INQ48_RS21595 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS21595 PF00107 Zinc-binding dehydrogenase INQ48_RS21600 PF17912 MalK OB fold domain INQ48_RS21600 PF00005 ABC transporter INQ48_RS21605 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21610 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS21615 PF01547 Bacterial extracellular solute-binding protein INQ48_RS21620 PF17853 GGDEF-like domain INQ48_RS21620 PF12833 Helix-turn-helix domain INQ48_RS21625 PF01523 Putative modulator of DNA gyrase INQ48_RS21630 PF04751 Protein of unknown function (DUF615) INQ48_RS21635 PF00994 Probable molybdopterin binding domain INQ48_RS21645 PF01545 Cation efflux family INQ48_RS21650 PF00873 AcrB/AcrD/AcrF family INQ48_RS21655 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS21655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS21660 PF02321 Outer membrane efflux protein INQ48_RS21670 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS21670 PF00072 Response regulator receiver domain INQ48_RS21675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS21675 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS21675 PF00672 HAMP domain INQ48_RS21680 PF00561 alpha/beta hydrolase fold INQ48_RS21690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS21690 PF08521 Two-component sensor kinase N-terminal INQ48_RS21690 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS21695 PF00072 Response regulator receiver domain INQ48_RS21695 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS21705 PF00999 Sodium/hydrogen exchanger family INQ48_RS21720 PF00403 Heavy-metal-associated domain INQ48_RS21725 PF13411 MerR HTH family regulatory protein INQ48_RS21735 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS21740 PF00588 SpoU rRNA Methylase family INQ48_RS21745 PF00459 Inositol monophosphatase family INQ48_RS21750 PF12805 FUSC-like inner membrane protein yccS INQ48_RS21760 PF04304 Protein of unknown function (DUF454) INQ48_RS21765 PF04235 Protein of unknown function (DUF418) INQ48_RS21785 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21790 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21795 PF00884 Sulfatase INQ48_RS21795 PF16385 Domain of unknown function INQ48_RS21820 PF13458 Periplasmic binding protein INQ48_RS21825 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS21835 PF00005 ABC transporter INQ48_RS21835 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS21840 PF00005 ABC transporter INQ48_RS21845 PF05853 beta-keto acid cleavage enzyme INQ48_RS21850 PF00106 short chain dehydrogenase INQ48_RS21855 PF07519 Tannase and feruloyl esterase INQ48_RS21870 PF00958 GMP synthase C terminal domain INQ48_RS21870 PF00117 Glutamine amidotransferase class-I INQ48_RS21870 PF03352 Methyladenine glycosylase INQ48_RS21870 PF13302 Acetyltransferase (GNAT) domain INQ48_RS21870 PF13673 Acetyltransferase (GNAT) domain INQ48_RS21880 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS21885 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS21885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS21885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS21890 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS21890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS21890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS21895 PF02515 CoA-transferase family III INQ48_RS21900 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21905 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS21915 PF02515 CoA-transferase family III INQ48_RS21920 PF03466 LysR substrate binding domain INQ48_RS21920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS21935 PF00593 TonB dependent receptor INQ48_RS21935 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS21950 PF00005 ABC transporter INQ48_RS21955 PF00444 Ribosomal protein L36 INQ48_RS21965 PF03551 Transcriptional regulator PadR-like family INQ48_RS21970 PF08021 Siderophore-interacting FAD-binding domain INQ48_RS21970 PF04954 Siderophore-interacting protein INQ48_RS21975 PF07690 Major Facilitator Superfamily INQ48_RS21985 PF01544 CorA-like Mg2+ transporter protein INQ48_RS21990 PF00488 MutS domain V INQ48_RS21990 PF05192 MutS domain III INQ48_RS21990 PF05190 MutS family domain IV INQ48_RS21990 PF01624 MutS domain I INQ48_RS21990 PF05188 MutS domain II INQ48_RS22005 PF01965 DJ-1/PfpI family INQ48_RS22010 PF01965 DJ-1/PfpI family INQ48_RS22015 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22025 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS22025 PF00072 Response regulator receiver domain INQ48_RS22030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS22030 PF07730 Histidine kinase INQ48_RS22030 PF00672 HAMP domain INQ48_RS22035 PF02673 Bacitracin resistance protein BacA INQ48_RS22050 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS22055 PF00202 Aminotransferase class-III INQ48_RS22060 PF01380 SIS domain INQ48_RS22060 PF01418 Helix-turn-helix domain, rpiR family INQ48_RS22070 PF02321 Outer membrane efflux protein INQ48_RS22075 PF00873 AcrB/AcrD/AcrF family INQ48_RS22080 PF00873 AcrB/AcrD/AcrF family INQ48_RS22095 PF04116 Fatty acid hydroxylase superfamily INQ48_RS22105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS22105 PF06580 Histidine kinase INQ48_RS22105 PF07694 5TMR of 5TMR-LYT INQ48_RS22110 PF00072 Response regulator receiver domain INQ48_RS22110 PF04397 LytTr DNA-binding domain INQ48_RS22120 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ48_RS22120 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain INQ48_RS22140 PF02661 Fic/DOC family INQ48_RS22140 PF12728 Helix-turn-helix domain INQ48_RS22155 PF00909 Ammonium Transporter Family INQ48_RS22160 PF04397 LytTr DNA-binding domain INQ48_RS22160 PF00072 Response regulator receiver domain INQ48_RS22185 PF01926 50S ribosome-binding GTPase INQ48_RS22190 PF01380 SIS domain INQ48_RS22190 PF00571 CBS domain INQ48_RS22215 PF00106 short chain dehydrogenase INQ48_RS22220 PF00072 Response regulator receiver domain INQ48_RS22225 PF04262 Glutamate-cysteine ligase INQ48_RS22235 PF02230 Phospholipase/Carboxylesterase INQ48_RS22245 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22250 PF01494 FAD binding domain INQ48_RS22255 PF00155 Aminotransferase class I and II INQ48_RS22260 PF03301 Tryptophan 2,3-dioxygenase INQ48_RS22265 PF12833 Helix-turn-helix domain INQ48_RS22265 PF12852 Cupin INQ48_RS22275 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS22275 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ48_RS22285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS22285 PF03466 LysR substrate binding domain INQ48_RS22290 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22295 PF02515 CoA-transferase family III INQ48_RS22300 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS22305 PF03466 LysR substrate binding domain INQ48_RS22305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS22310 PF07690 Major Facilitator Superfamily INQ48_RS22320 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS22340 PF05661 Protein of unknown function (DUF808) INQ48_RS22360 PF09905 DNA-binding protein VF530 INQ48_RS22365 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS22375 PF00849 RNA pseudouridylate synthase INQ48_RS22380 PF00582 Universal stress protein family INQ48_RS22415 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22425 PF10017 Histidine-specific methyltransferase, SAM-dependent INQ48_RS22430 PF03781 Sulfatase-modifying factor enzyme 1 INQ48_RS22430 PF12867 DinB superfamily INQ48_RS22435 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS22450 PF00565 Staphylococcal nuclease homologue INQ48_RS22460 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS22465 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS22465 PF00501 AMP-binding enzyme INQ48_RS22470 PF02566 OsmC-like protein INQ48_RS22475 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22485 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS22490 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS22495 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS22500 PF00005 ABC transporter INQ48_RS22510 PF00583 Acetyltransferase (GNAT) family INQ48_RS22520 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ48_RS22540 PF07732 Multicopper oxidase INQ48_RS22540 PF07731 Multicopper oxidase INQ48_RS22540 PF00394 Multicopper oxidase INQ48_RS22570 PF03576 Peptidase family S58 INQ48_RS22580 PF00425 chorismate binding enzyme INQ48_RS22580 PF04715 Anthranilate synthase component I, N terminal region INQ48_RS22585 PF13411 MerR HTH family regulatory protein INQ48_RS22595 PF00005 ABC transporter INQ48_RS22595 PF12848 ABC transporter INQ48_RS22600 PF00271 Helicase conserved C-terminal domain INQ48_RS22600 PF00270 DEAD/DEAH box helicase INQ48_RS22610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ48_RS22610 PF13378 Enolase C-terminal domain-like INQ48_RS22615 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS22620 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS22625 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS22630 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS22630 PF07729 FCD domain INQ48_RS22635 PF00920 Dehydratase family INQ48_RS22645 PF01081 KDPG and KHG aldolase INQ48_RS22650 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS22685 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ48_RS22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS22690 PF03466 LysR substrate binding domain INQ48_RS22695 PF13416 Bacterial extracellular solute-binding protein INQ48_RS22705 PF00005 ABC transporter INQ48_RS22705 PF08402 TOBE domain INQ48_RS22715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS22735 PF01081 KDPG and KHG aldolase INQ48_RS22740 PF00920 Dehydratase family INQ48_RS22755 PF00080 Copper/zinc superoxide dismutase (SODC) INQ48_RS22765 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region INQ48_RS22765 PF01243 Pyridoxamine 5'-phosphate oxidase INQ48_RS22780 PF03547 Membrane transport protein INQ48_RS22785 PF00593 TonB dependent receptor INQ48_RS22785 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS22795 PF01625 Peptide methionine sulfoxide reductase INQ48_RS22800 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS22800 PF17922 Tetracyclin repressor-like, C-terminal domain INQ48_RS22825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III INQ48_RS22825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II INQ48_RS22825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I INQ48_RS22825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain INQ48_RS22830 PF02805 Metal binding domain of Ada INQ48_RS22830 PF12833 Helix-turn-helix domain INQ48_RS22835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ48_RS22835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ48_RS22840 PF00892 EamA-like transporter family INQ48_RS22850 PF00034 Cytochrome c INQ48_RS22855 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS22855 PF00034 Cytochrome c INQ48_RS22860 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS22860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS22860 PF00672 HAMP domain INQ48_RS22865 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS22865 PF00072 Response regulator receiver domain INQ48_RS22875 PF00578 AhpC/TSA family INQ48_RS22875 PF02683 Cytochrome C biogenesis protein transmembrane region INQ48_RS22875 PF17991 Thioredoxin like C-terminal domain INQ48_RS22885 PF00501 AMP-binding enzyme INQ48_RS22885 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS22890 PF03435 Saccharopine dehydrogenase NADP binding domain INQ48_RS22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS22905 PF03466 LysR substrate binding domain INQ48_RS22910 PF07519 Tannase and feruloyl esterase INQ48_RS22915 PF01565 FAD binding domain INQ48_RS22915 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS22920 PF07690 Major Facilitator Superfamily INQ48_RS22930 PF07687 Peptidase dimerisation domain INQ48_RS22930 PF01546 Peptidase family M20/M25/M40 INQ48_RS22940 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS22945 PF00067 Cytochrome P450 INQ48_RS22950 PF01804 Penicillin amidase INQ48_RS22955 PF02321 Outer membrane efflux protein INQ48_RS22960 PF00005 ABC transporter INQ48_RS22960 PF12704 MacB-like periplasmic core domain INQ48_RS22960 PF02687 FtsX-like permease family INQ48_RS22965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS22970 PF00005 ABC transporter INQ48_RS22970 PF00664 ABC transporter transmembrane region INQ48_RS22985 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) INQ48_RS23000 PF00593 TonB dependent receptor INQ48_RS23000 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS23005 PF01497 Periplasmic binding protein INQ48_RS23010 PF01032 FecCD transport family INQ48_RS23015 PF04954 Siderophore-interacting protein INQ48_RS23015 PF08021 Siderophore-interacting FAD-binding domain INQ48_RS23020 PF00005 ABC transporter INQ48_RS23025 PF00501 AMP-binding enzyme INQ48_RS23025 PF00668 Condensation domain INQ48_RS23025 PF00550 Phosphopantetheine attachment site INQ48_RS23025 PF00975 Thioesterase domain INQ48_RS23025 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23045 PF00501 AMP-binding enzyme INQ48_RS23045 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23045 PF00668 Condensation domain INQ48_RS23045 PF00550 Phosphopantetheine attachment site INQ48_RS23045 PF07993 Male sterility protein INQ48_RS23050 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23050 PF00668 Condensation domain INQ48_RS23050 PF07993 Male sterility protein INQ48_RS23050 PF00550 Phosphopantetheine attachment site INQ48_RS23050 PF00501 AMP-binding enzyme INQ48_RS23055 PF00668 Condensation domain INQ48_RS23055 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS23055 PF00550 Phosphopantetheine attachment site INQ48_RS23055 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS23055 PF00698 Acyl transferase domain INQ48_RS23055 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS23060 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23060 PF00550 Phosphopantetheine attachment site INQ48_RS23060 PF00501 AMP-binding enzyme INQ48_RS23060 PF00975 Thioesterase domain INQ48_RS23060 PF00668 Condensation domain INQ48_RS23065 PF00501 AMP-binding enzyme INQ48_RS23065 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23065 PF00975 Thioesterase domain INQ48_RS23065 PF00668 Condensation domain INQ48_RS23065 PF00550 Phosphopantetheine attachment site INQ48_RS23070 PF00668 Condensation domain INQ48_RS23070 PF00501 AMP-binding enzyme INQ48_RS23070 PF00550 Phosphopantetheine attachment site INQ48_RS23070 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23080 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23080 PF00668 Condensation domain INQ48_RS23080 PF07993 Male sterility protein INQ48_RS23080 PF00501 AMP-binding enzyme INQ48_RS23080 PF00550 Phosphopantetheine attachment site INQ48_RS23085 PF00668 Condensation domain INQ48_RS23085 PF00550 Phosphopantetheine attachment site INQ48_RS23085 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23085 PF00501 AMP-binding enzyme INQ48_RS23085 PF00975 Thioesterase domain INQ48_RS23090 PF03621 MbtH-like protein INQ48_RS23100 PF04542 Sigma-70 region 2 INQ48_RS23100 PF08281 Sigma-70, region 4 INQ48_RS23115 PF00106 short chain dehydrogenase INQ48_RS23120 PF12833 Helix-turn-helix domain INQ48_RS23120 PF12852 Cupin INQ48_RS23140 PF00749 tRNA synthetases class I (E and Q), catalytic domain INQ48_RS23145 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS23150 PF00156 Phosphoribosyl transferase domain INQ48_RS23165 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS23165 PF08245 Mur ligase middle domain INQ48_RS23170 PF03960 ArsC family INQ48_RS23180 PF06865 Pyrimidine/purine nucleoside phosphorylase INQ48_RS23185 PF00764 Arginosuccinate synthase INQ48_RS23195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain INQ48_RS23195 PF01565 FAD binding domain INQ48_RS23200 PF04461 Protein of unknown function (DUF520) INQ48_RS23210 PF01042 Endoribonuclease L-PSP INQ48_RS23215 PF02660 Glycerol-3-phosphate acyltransferase INQ48_RS23220 PF04073 Aminoacyl-tRNA editing domain INQ48_RS23225 PF00248 Aldo/keto reductase family INQ48_RS23230 PF00561 alpha/beta hydrolase fold INQ48_RS23235 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS23240 PF03180 NLPA lipoprotein INQ48_RS23245 PF00296 Luciferase-like monooxygenase INQ48_RS23255 PF03180 NLPA lipoprotein INQ48_RS23260 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23265 PF09383 NIL domain INQ48_RS23265 PF00005 ABC transporter INQ48_RS23270 PF03180 NLPA lipoprotein INQ48_RS23280 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS23285 PF11940 Domain of unknown function (DUF3458) Ig-like fold INQ48_RS23285 PF01433 Peptidase family M1 domain INQ48_RS23285 PF17432 Domain of unknown function (DUF3458_C) ARM repeats INQ48_RS23290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain INQ48_RS23305 PF01844 HNH endonuclease INQ48_RS23330 PF02146 Sir2 family INQ48_RS23340 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23345 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23355 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS23360 PF01515 Phosphate acetyl/butaryl transferase INQ48_RS23370 PF00135 Carboxylesterase family INQ48_RS23385 PF04976 DMSO reductase anchor subunit (DmsC) INQ48_RS23390 PF13247 4Fe-4S dicluster domain INQ48_RS23390 PF12800 4Fe-4S binding domain INQ48_RS23395 PF01568 Molydopterin dinucleotide binding domain INQ48_RS23395 PF00384 Molybdopterin oxidoreductase INQ48_RS23395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS23400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23400 PF03466 LysR substrate binding domain INQ48_RS23405 PF00871 Acetokinase family INQ48_RS23410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS23410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS23410 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS23415 PF09339 IclR helix-turn-helix domain INQ48_RS23415 PF01614 Bacterial transcriptional regulator INQ48_RS23420 PF07728 AAA domain (dynein-related subfamily) INQ48_RS23420 PF12556 Cobaltochelatase CobS subunit N terminal INQ48_RS23420 PF08406 CbbQ/NirQ/NorQ C-terminal INQ48_RS23425 PF06213 Cobalamin biosynthesis protein CobT INQ48_RS23425 PF11775 Cobalamin biosynthesis protein CobT VWA domain INQ48_RS23435 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS23440 PF00171 Aldehyde dehydrogenase family INQ48_RS23445 PF00501 AMP-binding enzyme INQ48_RS23445 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS23470 PF03358 NADPH-dependent FMN reductase INQ48_RS23485 PF01614 Bacterial transcriptional regulator INQ48_RS23485 PF09339 IclR helix-turn-helix domain INQ48_RS23490 PF05199 GMC oxidoreductase INQ48_RS23490 PF00732 GMC oxidoreductase INQ48_RS23495 PF00083 Sugar (and other) transporter INQ48_RS23495 PF07690 Major Facilitator Superfamily INQ48_RS23500 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS23505 PF00202 Aminotransferase class-III INQ48_RS23540 PF03466 LysR substrate binding domain INQ48_RS23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23545 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23550 PF00005 ABC transporter INQ48_RS23555 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ48_RS23560 PF13936 Helix-turn-helix domain INQ48_RS23560 PF00665 Integrase core domain INQ48_RS23570 PF05995 Cysteine dioxygenase type I INQ48_RS23575 PF09084 NMT1/THI5 like INQ48_RS23580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS23580 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS23580 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS23585 PF00296 Luciferase-like monooxygenase INQ48_RS23590 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS23595 PF09084 NMT1/THI5 like INQ48_RS23600 PF09084 NMT1/THI5 like INQ48_RS23615 PF03466 LysR substrate binding domain INQ48_RS23615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23620 PF01546 Peptidase family M20/M25/M40 INQ48_RS23625 PF00149 Calcineurin-like phosphoesterase INQ48_RS23630 PF01595 Cyclin M transmembrane N-terminal domain INQ48_RS23630 PF00571 CBS domain INQ48_RS23630 PF03471 Transporter associated domain INQ48_RS23645 PF00709 Adenylosuccinate synthetase INQ48_RS23650 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS23655 PF03741 Integral membrane protein TerC family INQ48_RS23660 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS23685 PF07683 Cobalamin synthesis protein cobW C-terminal domain INQ48_RS23685 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS23690 PF01979 Amidohydrolase family INQ48_RS23695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS23695 PF00005 ABC transporter INQ48_RS23700 PF00005 ABC transporter INQ48_RS23700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS23705 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23705 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS23710 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS23730 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS23730 PF00155 Aminotransferase class I and II INQ48_RS23735 PF00271 Helicase conserved C-terminal domain INQ48_RS23735 PF00270 DEAD/DEAH box helicase INQ48_RS23740 PF04228 Putative neutral zinc metallopeptidase INQ48_RS23745 PF00692 dUTPase INQ48_RS23750 PF01979 Amidohydrolase family INQ48_RS23755 PF02082 Transcriptional regulator INQ48_RS23760 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS23770 PF07690 Major Facilitator Superfamily INQ48_RS23775 PF01804 Penicillin amidase INQ48_RS23780 PF12833 Helix-turn-helix domain INQ48_RS23780 PF02311 AraC-like ligand binding domain INQ48_RS23785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23785 PF03466 LysR substrate binding domain INQ48_RS23795 PF00962 Adenosine/AMP deaminase INQ48_RS23805 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS23810 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS23815 PF00005 ABC transporter INQ48_RS23820 PF01266 FAD dependent oxidoreductase INQ48_RS23870 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS23880 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS23885 PF00005 ABC transporter INQ48_RS23890 PF00860 Permease family INQ48_RS23895 PF03466 LysR substrate binding domain INQ48_RS23895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS23900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS23905 PF01799 [2Fe-2S] binding domain INQ48_RS23905 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS23910 PF17042 Nucleotide-binding C-terminal domain INQ48_RS23910 PF07005 Sugar-binding N-terminal domain INQ48_RS23915 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain INQ48_RS23915 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain INQ48_RS23925 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS23930 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS23935 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS23940 PF03466 LysR substrate binding domain INQ48_RS23940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS23945 PF07995 Glucose / Sorbosone dehydrogenase INQ48_RS23950 PF00034 Cytochrome c INQ48_RS23965 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS23980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS23990 PF01451 Low molecular weight phosphotyrosine protein phosphatase INQ48_RS24005 PF00690 Cation transporter/ATPase, N-terminus INQ48_RS24005 PF00689 Cation transporting ATPase, C-terminus INQ48_RS24010 PF02308 MgtC family INQ48_RS24015 PF00171 Aldehyde dehydrogenase family INQ48_RS24020 PF13660 Domain of unknown function (DUF4147) INQ48_RS24020 PF05161 MOFRL family INQ48_RS24040 PF00576 HIUase/Transthyretin family INQ48_RS24045 PF07729 FCD domain INQ48_RS24045 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS24055 PF01546 Peptidase family M20/M25/M40 INQ48_RS24055 PF07687 Peptidase dimerisation domain INQ48_RS24060 PF07687 Peptidase dimerisation domain INQ48_RS24060 PF01546 Peptidase family M20/M25/M40 INQ48_RS24080 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS24085 PF03466 LysR substrate binding domain INQ48_RS24085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24095 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin INQ48_RS24100 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS24115 PF16363 GDP-mannose 4,6 dehydratase INQ48_RS24120 PF00860 Permease family INQ48_RS24125 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS24130 PF00005 ABC transporter INQ48_RS24135 PF09084 NMT1/THI5 like INQ48_RS24140 PF02538 Hydantoinase B/oxoprolinase INQ48_RS24145 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS24145 PF01968 Hydantoinase/oxoprolinase INQ48_RS24150 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS24155 PF00248 Aldo/keto reductase family INQ48_RS24160 PF02954 Bacterial regulatory protein, Fis family INQ48_RS24160 PF00072 Response regulator receiver domain INQ48_RS24160 PF00158 Sigma-54 interaction domain INQ48_RS24165 PF02743 Cache domain INQ48_RS24165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24165 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24170 PF00375 Sodium:dicarboxylate symporter family INQ48_RS24180 PF03060 Nitronate monooxygenase INQ48_RS24185 PF02515 CoA-transferase family III INQ48_RS24190 PF13607 Succinyl-CoA ligase like flavodoxin domain INQ48_RS24190 PF13380 CoA binding domain INQ48_RS24195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS24195 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS24195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS24205 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS24215 PF00108 Thiolase, N-terminal domain INQ48_RS24215 PF02803 Thiolase, C-terminal domain INQ48_RS24220 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS24230 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS24230 PF08448 PAS fold INQ48_RS24240 PF02735 Ku70/Ku80 beta-barrel domain INQ48_RS24255 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS24255 PF00072 Response regulator receiver domain INQ48_RS24260 PF00072 Response regulator receiver domain INQ48_RS24260 PF09456 RcsC Alpha-Beta-Loop (ABL) INQ48_RS24260 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS24275 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS24280 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS24290 PF03466 LysR substrate binding domain INQ48_RS24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24295 PF00375 Sodium:dicarboxylate symporter family INQ48_RS24305 PF01594 AI-2E family transporter INQ48_RS24320 PF03466 LysR substrate binding domain INQ48_RS24320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS24325 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS24325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS24330 PF01261 Xylose isomerase-like TIM barrel INQ48_RS24335 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS24335 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS24340 PF04820 Tryptophan halogenase INQ48_RS24345 PF01515 Phosphate acetyl/butaryl transferase INQ48_RS24345 PF00390 Malic enzyme, N-terminal domain INQ48_RS24345 PF03949 Malic enzyme, NAD binding domain INQ48_RS24370 PF00005 ABC transporter INQ48_RS24375 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS24385 PF13649 Methyltransferase domain INQ48_RS24390 PF13411 MerR HTH family regulatory protein INQ48_RS24405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24405 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24410 PF00072 Response regulator receiver domain INQ48_RS24410 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS24425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24425 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24430 PF00072 Response regulator receiver domain INQ48_RS24430 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS24445 PF01638 HxlR-like helix-turn-helix INQ48_RS24465 PF01037 Lrp/AsnC ligand binding domain INQ48_RS24470 PF01266 FAD dependent oxidoreductase INQ48_RS24475 PF00355 Rieske [2Fe-2S] domain INQ48_RS24485 PF14437 MafB19-like deaminase INQ48_RS24490 PF01774 UreD urease accessory protein INQ48_RS24495 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS24495 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS24495 PF00563 EAL domain INQ48_RS24500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24500 PF03466 LysR substrate binding domain INQ48_RS24515 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS24520 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS24540 PF01476 LysM domain INQ48_RS24540 PF01551 Peptidase family M23 INQ48_RS24565 PF03033 Glycosyltransferase family 28 N-terminal domain INQ48_RS24570 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS24570 PF17754 MftR C-terminal domain INQ48_RS24575 PF13018 Extended Signal Peptide of Type V secretion system INQ48_RS24575 PF05658 Head domain of trimeric autotransporter adhesin INQ48_RS24575 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ48_RS24575 PF03895 YadA-like membrane anchor domain INQ48_RS24585 PF00583 Acetyltransferase (GNAT) family INQ48_RS24590 PF02146 Sir2 family INQ48_RS24595 PF04328 Selenoprotein, putative INQ48_RS24600 PF13722 5TM C-terminal transporter carbon starvation CstA INQ48_RS24600 PF02554 Carbon starvation protein CstA INQ48_RS24605 PF00877 NlpC/P60 family INQ48_RS24610 PF00216 Bacterial DNA-binding protein INQ48_RS24615 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS24615 PF00072 Response regulator receiver domain INQ48_RS24620 PF17200 Single Cache domain 2 INQ48_RS24620 PF07730 Histidine kinase INQ48_RS24625 PF01636 Phosphotransferase enzyme family INQ48_RS24635 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24635 PF00672 HAMP domain INQ48_RS24640 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS24640 PF00072 Response regulator receiver domain INQ48_RS24645 PF00873 AcrB/AcrD/AcrF family INQ48_RS24650 PF13533 Biotin-lipoyl like INQ48_RS24655 PF08139 Prokaryotic membrane lipoprotein lipid attachment site INQ48_RS24655 PF02321 Outer membrane efflux protein INQ48_RS24660 PF00248 Aldo/keto reductase family INQ48_RS24675 PF07690 Major Facilitator Superfamily INQ48_RS24680 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS24685 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS24690 PF02515 CoA-transferase family III INQ48_RS24695 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS24705 PF00005 ABC transporter INQ48_RS24710 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS24710 PF00005 ABC transporter INQ48_RS24720 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS24745 PF07690 Major Facilitator Superfamily INQ48_RS24755 PF03976 Polyphosphate kinase 2 (PPK2) INQ48_RS24760 PF01384 Phosphate transporter family INQ48_RS24770 PF02811 PHP domain INQ48_RS24780 PF01300 Telomere recombination INQ48_RS24785 PF02163 Peptidase family M50 INQ48_RS24790 PF00579 tRNA synthetases class I (W and Y) INQ48_RS24795 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS24795 PF00072 Response regulator receiver domain INQ48_RS24800 PF00672 HAMP domain INQ48_RS24800 PF00072 Response regulator receiver domain INQ48_RS24800 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS24800 PF01627 Hpt domain INQ48_RS24800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS24810 PF00155 Aminotransferase class I and II INQ48_RS24810 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS24820 PF00795 Carbon-nitrogen hydrolase INQ48_RS24835 PF00586 AIR synthase related protein, N-terminal domain INQ48_RS24835 PF02769 AIR synthase related protein, C-terminal domain INQ48_RS24850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24850 PF03466 LysR substrate binding domain INQ48_RS24855 PF07690 Major Facilitator Superfamily INQ48_RS24890 PF00202 Aminotransferase class-III INQ48_RS24895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24895 PF03466 LysR substrate binding domain INQ48_RS24905 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS24910 PF07687 Peptidase dimerisation domain INQ48_RS24910 PF01546 Peptidase family M20/M25/M40 INQ48_RS24920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS24920 PF03466 LysR substrate binding domain INQ48_RS24940 PF00717 Peptidase S24-like INQ48_RS24945 PF00817 impB/mucB/samB family INQ48_RS24945 PF11799 impB/mucB/samB family C-terminal domain INQ48_RS24945 PF11798 IMS family HHH motif INQ48_RS24945 PF13438 Domain of unknown function (DUF4113) INQ48_RS25090 PF02413 Caudovirales tail fibre assembly protein, lambda gpK INQ48_RS25225 PF13356 Arm DNA-binding domain INQ48_RS25225 PF14659 Phage integrase, N-terminal SAM-like domain INQ48_RS25225 PF00589 Phage integrase family INQ48_RS25235 PF02403 Seryl-tRNA synthetase N-terminal domain INQ48_RS25235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ48_RS25240 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS25245 PF02401 LytB protein INQ48_RS25250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS25255 PF04002 RadC-like JAB domain INQ48_RS25260 PF01713 Smr domain INQ48_RS25265 PF00149 Calcineurin-like phosphoesterase INQ48_RS25265 PF02872 5'-nucleotidase, C-terminal domain INQ48_RS25270 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS25270 PF14759 Reductase C-terminal INQ48_RS25280 PF07055 Enoyl reductase FAD binding domain INQ48_RS25280 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase INQ48_RS25280 PF12241 Trans-2-enoyl-CoA reductase catalytic region INQ48_RS25285 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS25290 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25295 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25300 PF00005 ABC transporter INQ48_RS25315 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS25320 PF07690 Major Facilitator Superfamily INQ48_RS25320 PF00083 Sugar (and other) transporter INQ48_RS25325 PF06481 COX Aromatic Rich Motif INQ48_RS25325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ48_RS25330 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ48_RS25335 PF00510 Cytochrome c oxidase subunit III INQ48_RS25340 PF03626 Prokaryotic Cytochrome C oxidase subunit IV INQ48_RS25350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS25350 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS25355 PF00072 Response regulator receiver domain INQ48_RS25360 PF03006 Haemolysin-III related INQ48_RS25365 PF04102 SlyX INQ48_RS25380 PF03466 LysR substrate binding domain INQ48_RS25380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS25385 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS25385 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS25405 PF07690 Major Facilitator Superfamily INQ48_RS25410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS25410 PF03466 LysR substrate binding domain INQ48_RS25425 PF00586 AIR synthase related protein, N-terminal domain INQ48_RS25425 PF02769 AIR synthase related protein, C-terminal domain INQ48_RS25435 PF00005 ABC transporter INQ48_RS25440 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25445 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25450 PF00581 Rhodanese-like domain INQ48_RS25455 PF02634 FdhD/NarQ family INQ48_RS25465 PF00384 Molybdopterin oxidoreductase INQ48_RS25470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS25470 PF03466 LysR substrate binding domain INQ48_RS25480 PF03459 TOBE domain INQ48_RS25480 PF00005 ABC transporter INQ48_RS25490 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25500 PF00881 Nitroreductase family INQ48_RS25505 PF01980 tRNA-methyltransferase O INQ48_RS25510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS25510 PF03459 TOBE domain INQ48_RS25520 PF07690 Major Facilitator Superfamily INQ48_RS25525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS25525 PF03466 LysR substrate binding domain INQ48_RS25530 PF10609 NUBPL iron-transfer P-loop NTPase INQ48_RS25540 PF04337 Protein of unknown function, DUF480 INQ48_RS25550 PF18324 Hypothetical protein TT1725 INQ48_RS25550 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS25555 PF01588 Putative tRNA binding domain INQ48_RS25555 PF09334 tRNA synthetases class I (M) INQ48_RS25570 PF01425 Amidase INQ48_RS25575 PF13018 Extended Signal Peptide of Type V secretion system INQ48_RS25575 PF03797 Autotransporter beta-domain INQ48_RS25575 PF16168 Adhesin of bacterial autotransporter system, probable stalk INQ48_RS25585 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS25585 PF00072 Response regulator receiver domain INQ48_RS25600 PF02616 Segregation and condensation protein ScpA INQ48_RS25605 PF02910 Fumarate reductase flavoprotein C-term INQ48_RS25605 PF00890 FAD binding domain INQ48_RS25610 PF02548 Ketopantoate hydroxymethyltransferase INQ48_RS25615 PF02569 Pantoate-beta-alanine ligase INQ48_RS25635 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) INQ48_RS25640 PF02445 Quinolinate synthetase A protein INQ48_RS25645 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain INQ48_RS25645 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain INQ48_RS25650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus INQ48_RS25650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus INQ48_RS25655 PF02556 Preprotein translocase subunit SecB INQ48_RS25660 PF00462 Glutaredoxin INQ48_RS25665 PF00581 Rhodanese-like domain INQ48_RS25670 PF00300 Histidine phosphatase superfamily (branch 1) INQ48_RS25675 PF13180 PDZ domain INQ48_RS25675 PF03572 Peptidase family S41 INQ48_RS25680 PF00899 ThiF family INQ48_RS25685 PF05170 AsmA family INQ48_RS25695 PF00072 Response regulator receiver domain INQ48_RS25695 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS25700 PF05231 MASE1 INQ48_RS25700 PF07730 Histidine kinase INQ48_RS25700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS25730 PF04972 BON domain INQ48_RS25755 PF01227 GTP cyclohydrolase I INQ48_RS25760 PF03372 Endonuclease/Exonuclease/phosphatase family INQ48_RS25765 PF00293 NUDIX domain INQ48_RS25780 PF01336 OB-fold nucleic acid binding domain INQ48_RS25780 PF00152 tRNA synthetases class II (D, K and N) INQ48_RS25780 PF02938 GAD domain INQ48_RS25795 PF00474 Sodium:solute symporter family INQ48_RS25800 PF03109 ABC1 family INQ48_RS25815 PF01209 ubiE/COQ5 methyltransferase family INQ48_RS25835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS25835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS25840 PF13416 Bacterial extracellular solute-binding protein INQ48_RS25845 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25850 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS25855 PF00005 ABC transporter INQ48_RS25855 PF17912 MalK OB fold domain INQ48_RS25860 PF03009 Glycerophosphoryl diester phosphodiesterase family INQ48_RS25865 PF12795 Mechanosensitive ion channel porin domain INQ48_RS25865 PF00924 Mechanosensitive ion channel INQ48_RS25865 PF12794 Mechanosensitive ion channel inner membrane domain 1 INQ48_RS25870 PF01037 Lrp/AsnC ligand binding domain INQ48_RS25880 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS25885 PF00005 ABC transporter INQ48_RS25900 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain INQ48_RS25900 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS25900 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain INQ48_RS25905 PF03462 PCRF domain INQ48_RS25905 PF00472 RF-1 domain INQ48_RS25910 PF17827 PrmC N-terminal domain INQ48_RS25910 PF05175 Methyltransferase small domain INQ48_RS25915 PF00462 Glutaredoxin INQ48_RS25925 PF01595 Cyclin M transmembrane N-terminal domain INQ48_RS25925 PF00571 CBS domain INQ48_RS25925 PF03471 Transporter associated domain INQ48_RS25930 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain INQ48_RS25930 PF01464 Transglycosylase SLT domain INQ48_RS25935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) INQ48_RS25935 PF03129 Anticodon binding domain INQ48_RS25935 PF04073 Aminoacyl-tRNA editing domain INQ48_RS25940 PF00293 NUDIX domain INQ48_RS25950 PF00696 Amino acid kinase family INQ48_RS25950 PF01472 PUA domain INQ48_RS25955 PF01018 GTP1/OBG INQ48_RS25955 PF01926 50S ribosome-binding GTPase INQ48_RS25960 PF01016 Ribosomal L27 protein INQ48_RS25965 PF00829 Ribosomal prokaryotic L21 protein INQ48_RS25970 PF00348 Polyprenyl synthetase INQ48_RS25980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INQ48_RS25980 PF00437 Type II/IV secretion system protein INQ48_RS25985 PF00482 Type II secretion system (T2SS), protein F INQ48_RS25990 PF01478 Type IV leader peptidase family INQ48_RS25990 PF06750 Bacterial Peptidase A24 N-terminal domain INQ48_RS25995 PF01121 Dephospho-CoA kinase INQ48_RS26000 PF03062 MBOAT, membrane-bound O-acyltransferase family INQ48_RS26010 PF07072 Cell division protein INQ48_RS26015 PF03884 DNA gyrase inhibitor YacG INQ48_RS26020 PF00293 NUDIX domain INQ48_RS26030 PF01960 ArgJ family INQ48_RS26035 PF07516 SecA Wing and Scaffold domain INQ48_RS26035 PF07517 SecA DEAD-like domain INQ48_RS26035 PF02810 SEC-C motif INQ48_RS26035 PF01043 SecA preprotein cross-linking domain INQ48_RS26045 PF02423 Ornithine cyclodeaminase/mu-crystallin family INQ48_RS26050 PF01168 Alanine racemase, N-terminal domain INQ48_RS26050 PF14031 Putative serine dehydratase domain INQ48_RS26055 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS26060 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS26065 PF08348 YheO-like PAS domain INQ48_RS26065 PF13309 HTH domain INQ48_RS26070 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26075 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS26080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26080 PF03466 LysR substrate binding domain INQ48_RS26085 PF00561 alpha/beta hydrolase fold INQ48_RS26100 PF00072 Response regulator receiver domain INQ48_RS26105 PF00072 Response regulator receiver domain INQ48_RS26105 PF01627 Hpt domain INQ48_RS26105 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS26105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS26110 PF00547 Urease, gamma subunit INQ48_RS26120 PF00699 Urease beta subunit INQ48_RS26125 PF00449 Urease alpha-subunit, N-terminal domain INQ48_RS26125 PF01979 Amidohydrolase family INQ48_RS26130 PF02814 UreE urease accessory protein, N-terminal domain INQ48_RS26130 PF05194 UreE urease accessory protein, C-terminal domain INQ48_RS26135 PF01730 UreF INQ48_RS26140 PF02492 CobW/HypB/UreG, nucleotide-binding domain INQ48_RS26155 PF13532 2OG-Fe(II) oxygenase superfamily INQ48_RS26160 PF03060 Nitronate monooxygenase INQ48_RS26165 PF00106 short chain dehydrogenase INQ48_RS26175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS26175 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS26175 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS26190 PF07729 FCD domain INQ48_RS26190 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS26200 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS26205 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS26210 PF00005 ABC transporter INQ48_RS26210 PF08402 TOBE domain INQ48_RS26215 PF00202 Aminotransferase class-III INQ48_RS26220 PF17042 Nucleotide-binding C-terminal domain INQ48_RS26220 PF07005 Sugar-binding N-terminal domain INQ48_RS26225 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS26230 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS26235 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS26235 PF00989 PAS fold INQ48_RS26240 PF00072 Response regulator receiver domain INQ48_RS26240 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS26245 PF00083 Sugar (and other) transporter INQ48_RS26255 PF01596 O-methyltransferase INQ48_RS26260 PF07690 Major Facilitator Superfamily INQ48_RS26265 PF00216 Bacterial DNA-binding protein INQ48_RS26270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26270 PF03466 LysR substrate binding domain INQ48_RS26275 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26285 PF00171 Aldehyde dehydrogenase family INQ48_RS26290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26290 PF03466 LysR substrate binding domain INQ48_RS26295 PF04909 Amidohydrolase INQ48_RS26300 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26305 PF01565 FAD binding domain INQ48_RS26305 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS26305 PF13183 4Fe-4S dicluster domain INQ48_RS26310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26310 PF03466 LysR substrate binding domain INQ48_RS26315 PF04371 Porphyromonas-type peptidyl-arginine deiminase INQ48_RS26320 PF04371 Porphyromonas-type peptidyl-arginine deiminase INQ48_RS26325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS26325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS26330 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS26330 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS26335 PF01799 [2Fe-2S] binding domain INQ48_RS26335 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS26335 PF10518 TAT (twin-arginine translocation) pathway signal sequence INQ48_RS26345 PF06969 HemN C-terminal domain INQ48_RS26345 PF04055 Radical SAM superfamily INQ48_RS26350 PF01725 Ham1 family INQ48_RS26355 PF01138 3' exoribonuclease family, domain 1 INQ48_RS26355 PF03725 3' exoribonuclease family, domain 2 INQ48_RS26365 PF00069 Protein kinase domain INQ48_RS26365 PF03793 PASTA domain INQ48_RS26370 PF08340 Domain of unknown function (DUF1732) INQ48_RS26370 PF03755 YicC-like family, N-terminal region INQ48_RS26375 PF00625 Guanylate kinase INQ48_RS26380 PF01192 RNA polymerase Rpb6 INQ48_RS26385 PF02824 TGS domain INQ48_RS26385 PF04607 Region found in RelA / SpoT proteins INQ48_RS26385 PF13291 ACT domain INQ48_RS26390 PF01272 Transcription elongation factor, GreA/GreB, C-term INQ48_RS26390 PF03449 Transcription elongation factor, N-terminal INQ48_RS26405 PF01628 HrcA protein C terminal domain INQ48_RS26405 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding INQ48_RS26410 PF01513 ATP-NAD kinase INQ48_RS26415 PF02463 RecF/RecN/SMC N terminal domain INQ48_RS26420 PF03668 P-loop ATPase protein family INQ48_RS26425 PF00730 HhH-GPD superfamily base excision DNA repair protein INQ48_RS26425 PF14815 NUDIX domain INQ48_RS26425 PF00633 Helix-hairpin-helix motif INQ48_RS26430 PF00350 Dynamin family INQ48_RS26435 PF06827 Zinc finger found in FPG and IleRS INQ48_RS26435 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain INQ48_RS26435 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain INQ48_RS26450 PF00288 GHMP kinases N terminal domain INQ48_RS26450 PF08544 GHMP kinases C terminal INQ48_RS26460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase INQ48_RS26460 PF14572 Phosphoribosyl synthetase-associated domain INQ48_RS26465 PF14693 Ribosomal protein TL5, C-terminal domain INQ48_RS26465 PF01386 Ribosomal L25p family INQ48_RS26485 PF01195 Peptidyl-tRNA hydrolase INQ48_RS26495 PF00037 4Fe-4S binding domain INQ48_RS26500 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS26505 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS26505 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS26510 PF00005 ABC transporter INQ48_RS26510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS26515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS26515 PF00005 ABC transporter INQ48_RS26520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS26525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS26530 PF03466 LysR substrate binding domain INQ48_RS26530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26545 PF07969 Amidohydrolase family INQ48_RS26550 PF00300 Histidine phosphatase superfamily (branch 1) INQ48_RS26560 PF12697 Alpha/beta hydrolase family INQ48_RS26565 PF01470 Pyroglutamyl peptidase INQ48_RS26580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26580 PF03466 LysR substrate binding domain INQ48_RS26585 PF03746 LamB/YcsF family INQ48_RS26590 PF02626 Carboxyltransferase domain, subdomain A and B INQ48_RS26595 PF02682 Carboxyltransferase domain, subdomain C and D INQ48_RS26600 PF01467 Cytidylyltransferase-like INQ48_RS26610 PF01810 LysE type translocator INQ48_RS26615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26615 PF03466 LysR substrate binding domain INQ48_RS26620 PF05193 Peptidase M16 inactive domain INQ48_RS26625 PF00675 Insulinase (Peptidase family M16) INQ48_RS26625 PF05193 Peptidase M16 inactive domain INQ48_RS26630 PF00448 SRP54-type protein, GTPase domain INQ48_RS26630 PF02881 SRP54-type protein, helical bundle domain INQ48_RS26635 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS26635 PF00072 Response regulator receiver domain INQ48_RS26635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS26635 PF09456 RcsC Alpha-Beta-Loop (ABL) INQ48_RS26640 PF00072 Response regulator receiver domain INQ48_RS26640 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS26650 PF04545 Sigma-70, region 4 INQ48_RS26650 PF04542 Sigma-70 region 2 INQ48_RS26650 PF00140 Sigma-70 factor, region 1.2 INQ48_RS26655 PF08713 DNA alkylation repair enzyme INQ48_RS26660 PF02630 SCO1/SenC INQ48_RS26665 PF01040 UbiA prenyltransferase family INQ48_RS26690 PF00510 Cytochrome c oxidase subunit III INQ48_RS26700 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 INQ48_RS26705 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ48_RS26710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain INQ48_RS26710 PF02790 Cytochrome C oxidase subunit II, transmembrane domain INQ48_RS26720 PF08241 Methyltransferase domain INQ48_RS26725 PF00156 Phosphoribosyl transferase domain INQ48_RS26730 PF00588 SpoU rRNA Methylase family INQ48_RS26740 PF01575 MaoC like domain INQ48_RS26750 PF02525 Flavodoxin-like fold INQ48_RS26755 PF02254 TrkA-N domain INQ48_RS26755 PF00999 Sodium/hydrogen exchanger family INQ48_RS26765 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26780 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS26785 PF07993 Male sterility protein INQ48_RS26785 PF00501 AMP-binding enzyme INQ48_RS26785 PF00550 Phosphopantetheine attachment site INQ48_RS26790 PF00106 short chain dehydrogenase INQ48_RS26795 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS26800 PF12806 Acetyl-CoA dehydrogenase C-terminal like INQ48_RS26800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS26800 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS26800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS26815 PF06983 3-demethylubiquinone-9 3-methyltransferase INQ48_RS26825 PF07690 Major Facilitator Superfamily INQ48_RS26830 PF07237 Protein of unknown function (DUF1428) INQ48_RS26845 PF00775 Dioxygenase INQ48_RS26845 PF04444 Catechol dioxygenase N terminus INQ48_RS26850 PF03466 LysR substrate binding domain INQ48_RS26850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS26875 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS26885 PF07690 Major Facilitator Superfamily INQ48_RS26890 PF01494 FAD binding domain INQ48_RS26910 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain INQ48_RS26910 PF01137 RNA 3'-terminal phosphate cyclase INQ48_RS26915 PF10127 RNA repair pathway DNA polymerase beta family INQ48_RS26930 PF01139 tRNA-splicing ligase RtcB INQ48_RS26945 PF06956 Regulator of RNA terminal phosphate cyclase INQ48_RS26945 PF00158 Sigma-54 interaction domain INQ48_RS26960 PF12146 Serine aminopeptidase, S33 INQ48_RS27020 PF00535 Glycosyl transferase family 2 INQ48_RS27025 PF01522 Polysaccharide deacetylase INQ48_RS27025 PF14883 Hypothetical glycosyl hydrolase family 13 INQ48_RS27035 PF02803 Thiolase, C-terminal domain INQ48_RS27035 PF00108 Thiolase, N-terminal domain INQ48_RS27040 PF01144 Coenzyme A transferase INQ48_RS27045 PF01144 Coenzyme A transferase INQ48_RS27050 PF09339 IclR helix-turn-helix domain INQ48_RS27050 PF01614 Bacterial transcriptional regulator INQ48_RS27065 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS27080 PF00005 ABC transporter INQ48_RS27085 PF00005 ABC transporter INQ48_RS27095 PF00171 Aldehyde dehydrogenase family INQ48_RS27110 PF03466 LysR substrate binding domain INQ48_RS27110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS27115 PF00324 Amino acid permease INQ48_RS27145 PF00263 Bacterial type II and III secretion system protein INQ48_RS27145 PF13629 Pilus formation protein N terminal region INQ48_RS27145 PF04972 BON domain INQ48_RS27155 PF00437 Type II/IV secretion system protein INQ48_RS27195 PF01590 GAF domain INQ48_RS27195 PF00158 Sigma-54 interaction domain INQ48_RS27195 PF02954 Bacterial regulatory protein, Fis family INQ48_RS27205 PF00529 HlyD membrane-fusion protein of T1SS INQ48_RS27205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS27210 PF03412 Peptidase C39 family INQ48_RS27210 PF00664 ABC transporter transmembrane region INQ48_RS27210 PF00005 ABC transporter INQ48_RS27220 PF08245 Mur ligase middle domain INQ48_RS27220 PF02875 Mur ligase family, glutamate ligase domain INQ48_RS27220 PF01225 Mur ligase family, catalytic domain INQ48_RS27225 PF00691 OmpA family INQ48_RS27245 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal INQ48_RS27245 PF00775 Dioxygenase INQ48_RS27255 PF07690 Major Facilitator Superfamily INQ48_RS27260 PF00034 Cytochrome c INQ48_RS27265 PF00004 ATPase family associated with various cellular activities (AAA) INQ48_RS27265 PF17862 AAA+ lid domain INQ48_RS27265 PF01434 Peptidase family M41 INQ48_RS27290 PF04357 TamB, inner membrane protein subunit of TAM complex INQ48_RS27305 PF02634 FdhD/NarQ family INQ48_RS27310 PF12838 4Fe-4S dicluster domain INQ48_RS27310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS27310 PF00384 Molybdopterin oxidoreductase INQ48_RS27310 PF01568 Molydopterin dinucleotide binding domain INQ48_RS27310 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region INQ48_RS27315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region INQ48_RS27315 PF00037 4Fe-4S binding domain INQ48_RS27315 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ48_RS27330 PF07690 Major Facilitator Superfamily INQ48_RS27340 PF03466 LysR substrate binding domain INQ48_RS27340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS27345 PF02887 Pyruvate kinase, alpha/beta domain INQ48_RS27345 PF00224 Pyruvate kinase, barrel domain INQ48_RS27350 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS27350 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS27355 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS27360 PF00549 CoA-ligase INQ48_RS27360 PF02629 CoA binding domain INQ48_RS27365 PF00549 CoA-ligase INQ48_RS27365 PF08442 ATP-grasp domain INQ48_RS27370 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS27375 PF02515 CoA-transferase family III INQ48_RS27380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS27380 PF00989 PAS fold INQ48_RS27380 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS27385 PF02515 CoA-transferase family III INQ48_RS27390 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS27390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS27390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS27405 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS27430 PF00561 alpha/beta hydrolase fold INQ48_RS27440 PF01613 Flavin reductase like domain INQ48_RS27445 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS27455 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS27455 PF16295 Tetracyclin repressor-like, C-terminal domain INQ48_RS27460 PF03060 Nitronate monooxygenase INQ48_RS27465 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS27470 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS27470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS27470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS27475 PF09339 IclR helix-turn-helix domain INQ48_RS27475 PF01614 Bacterial transcriptional regulator INQ48_RS27480 PF02515 CoA-transferase family III INQ48_RS27485 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS27485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS27485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS27495 PF02515 CoA-transferase family III INQ48_RS27505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS27510 PF00892 EamA-like transporter family INQ48_RS27520 PF00005 ABC transporter INQ48_RS27525 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS27525 PF00005 ABC transporter INQ48_RS27535 PF13458 Periplasmic binding protein INQ48_RS27545 PF00890 FAD binding domain INQ48_RS27560 PF01553 Acyltransferase INQ48_RS27565 PF01979 Amidohydrolase family INQ48_RS27570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ48_RS27570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ48_RS27575 PF00156 Phosphoribosyl transferase domain INQ48_RS27580 PF03652 Holliday junction resolvase INQ48_RS27585 PF02622 Uncharacterized ACR, COG1678 INQ48_RS27590 PF03441 FAD binding domain of DNA photolyase INQ48_RS27590 PF00875 DNA photolyase INQ48_RS27595 PF00072 Response regulator receiver domain INQ48_RS27595 PF01627 Hpt domain INQ48_RS27595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS27595 PF01584 CheW-like domain INQ48_RS27600 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term INQ48_RS27600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain INQ48_RS27610 PF00072 Response regulator receiver domain INQ48_RS27615 PF00072 Response regulator receiver domain INQ48_RS27620 PF00301 Rubredoxin INQ48_RS27630 PF00202 Aminotransferase class-III INQ48_RS27635 PF01425 Amidase INQ48_RS27645 PF03466 LysR substrate binding domain INQ48_RS27645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS27655 PF01808 AICARFT/IMPCHase bienzyme INQ48_RS27655 PF02142 MGS-like domain INQ48_RS27660 PF02954 Bacterial regulatory protein, Fis family INQ48_RS27665 PF01207 Dihydrouridine synthase (Dus) INQ48_RS27670 PF09335 SNARE associated Golgi protein INQ48_RS27690 PF01926 50S ribosome-binding GTPase INQ48_RS27690 PF06071 Protein of unknown function (DUF933) INQ48_RS27695 PF13407 Periplasmic binding protein domain INQ48_RS27700 PF00005 ABC transporter INQ48_RS27705 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS27710 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS27715 PF00294 pfkB family carbohydrate kinase INQ48_RS27720 PF05025 RbsD / FucU transport protein family INQ48_RS27730 PF01494 FAD binding domain INQ48_RS27735 PF10411 Disulfide bond isomerase protein N-terminus INQ48_RS27735 PF13098 Thioredoxin-like domain INQ48_RS27750 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS27785 PF00106 short chain dehydrogenase INQ48_RS27790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS27800 PF04116 Fatty acid hydroxylase superfamily INQ48_RS27810 PF05491 RuvB C-terminal winged helix domain INQ48_RS27810 PF05496 Holliday junction DNA helicase RuvB P-loop domain INQ48_RS27810 PF17864 RuvB AAA lid domain INQ48_RS27815 PF01066 CDP-alcohol phosphatidyltransferase INQ48_RS27820 PF12147 Putative methyltransferase INQ48_RS27820 PF12146 Serine aminopeptidase, S33 INQ48_RS27860 PF13607 Succinyl-CoA ligase like flavodoxin domain INQ48_RS27860 PF13380 CoA binding domain INQ48_RS27860 PF00583 Acetyltransferase (GNAT) family INQ48_RS27865 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS27885 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS27890 PF12833 Helix-turn-helix domain INQ48_RS27890 PF14525 AraC-binding-like domain INQ48_RS27895 PF01179 Copper amine oxidase, enzyme domain INQ48_RS27895 PF07833 Copper amine oxidase N-terminal domain INQ48_RS27895 PF02727 Copper amine oxidase, N2 domain INQ48_RS27895 PF02728 Copper amine oxidase, N3 domain INQ48_RS27915 PF01330 RuvA N terminal domain INQ48_RS27915 PF07499 RuvA, C-terminal domain INQ48_RS27920 PF02562 PhoH-like protein INQ48_RS27925 PF02130 Uncharacterized protein family UPF0054 INQ48_RS27935 PF02580 D-Tyr-tRNA(Tyr) deacylase INQ48_RS27940 PF01545 Cation efflux family INQ48_RS27940 PF16916 Dimerisation domain of Zinc Transporter INQ48_RS27955 PF01479 S4 domain INQ48_RS27955 PF00579 tRNA synthetases class I (W and Y) INQ48_RS27960 PF04225 Opacity-associated protein A LysM-like domain INQ48_RS27960 PF01551 Peptidase family M23 INQ48_RS27965 PF03702 Anhydro-N-acetylmuramic acid kinase INQ48_RS27970 PF07690 Major Facilitator Superfamily INQ48_RS27975 PF01521 Iron-sulphur cluster biosynthesis INQ48_RS27980 PF00380 Ribosomal protein S9/S16 INQ48_RS27985 PF00572 Ribosomal protein L13 INQ48_RS27990 PF00595 PDZ domain INQ48_RS28000 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ INQ48_RS28005 PF03330 Lytic transglycolase INQ48_RS28010 PF02219 Methylenetetrahydrofolate reductase INQ48_RS28015 PF01728 FtsJ-like methyltransferase INQ48_RS28015 PF01479 S4 domain INQ48_RS28020 PF05221 S-adenosyl-L-homocysteine hydrolase INQ48_RS28020 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain INQ48_RS28040 PF00561 alpha/beta hydrolase fold INQ48_RS28050 PF00009 Elongation factor Tu GTP binding domain INQ48_RS28050 PF16658 Class II release factor RF3, C-terminal domain INQ48_RS28050 PF03144 Elongation factor Tu domain 2 INQ48_RS28065 PF00005 ABC transporter INQ48_RS28085 PF13784 Fic/DOC family N-terminal INQ48_RS28085 PF02661 Fic/DOC family INQ48_RS28090 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS28095 PF00850 Histone deacetylase domain INQ48_RS28100 PF02423 Ornithine cyclodeaminase/mu-crystallin family INQ48_RS28105 PF17760 UvrA interaction domain INQ48_RS28105 PF00005 ABC transporter INQ48_RS28105 PF17755 UvrA DNA-binding domain INQ48_RS28125 PF00083 Sugar (and other) transporter INQ48_RS28125 PF08946 Osmosensory transporter coiled coil INQ48_RS28145 PF18267 Rubredoxin NAD+ reductase C-terminal domain INQ48_RS28145 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS28145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain INQ48_RS28145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain INQ48_RS28145 PF04324 BFD-like [2Fe-2S] binding domain INQ48_RS28150 PF13806 Rieske-like [2Fe-2S] domain INQ48_RS28155 PF01226 Formate/nitrite transporter INQ48_RS28160 PF03793 PASTA domain INQ48_RS28160 PF00069 Protein kinase domain INQ48_RS28165 PF00682 HMGL-like INQ48_RS28170 PF03466 LysR substrate binding domain INQ48_RS28170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS28175 PF02515 CoA-transferase family III INQ48_RS28180 PF00775 Dioxygenase INQ48_RS28180 PF04444 Catechol dioxygenase N terminus INQ48_RS28190 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS28195 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS28200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS28220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS28220 PF00364 Biotin-requiring enzyme INQ48_RS28220 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS28220 PF02785 Biotin carboxylase C-terminal domain INQ48_RS28230 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS28235 PF01039 Carboxyl transferase domain INQ48_RS28240 PF00501 AMP-binding enzyme INQ48_RS28240 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS28245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS28245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS28245 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS28260 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS28265 PF00355 Rieske [2Fe-2S] domain INQ48_RS28280 PF13419 Haloacid dehalogenase-like hydrolase INQ48_RS28285 PF13667 ThiC-associated domain INQ48_RS28285 PF01964 Radical SAM ThiC family INQ48_RS28295 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS28300 PF01425 Amidase INQ48_RS28305 PF00149 Calcineurin-like phosphoesterase INQ48_RS28310 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS28310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS28310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS28315 PF01546 Peptidase family M20/M25/M40 INQ48_RS28315 PF07687 Peptidase dimerisation domain INQ48_RS28320 PF02803 Thiolase, C-terminal domain INQ48_RS28320 PF00108 Thiolase, N-terminal domain INQ48_RS28325 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) INQ48_RS28330 PF00484 Carbonic anhydrase INQ48_RS28335 PF13411 MerR HTH family regulatory protein INQ48_RS28350 PF00849 RNA pseudouridylate synthase INQ48_RS28390 PF02092 Glycyl-tRNA synthetase beta subunit INQ48_RS28390 PF05746 DALR anticodon binding domain INQ48_RS28395 PF02091 Glycyl-tRNA synthetase alpha subunit INQ48_RS28400 PF00781 Diacylglycerol kinase catalytic domain INQ48_RS28405 PF00149 Calcineurin-like phosphoesterase INQ48_RS28410 PF01569 PAP2 superfamily INQ48_RS28415 PF00710 Asparaginase, N-terminal INQ48_RS28415 PF17763 Glutaminase/Asparaginase C-terminal domain INQ48_RS28430 PF01979 Amidohydrolase family INQ48_RS28435 PF02633 Creatinine amidohydrolase INQ48_RS28445 PF00005 ABC transporter INQ48_RS28450 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS28460 PF00795 Carbon-nitrogen hydrolase INQ48_RS28465 PF00571 CBS domain INQ48_RS28465 PF03471 Transporter associated domain INQ48_RS28475 PF01037 Lrp/AsnC ligand binding domain INQ48_RS28480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS28485 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS28490 PF00351 Biopterin-dependent aromatic amino acid hydroxylase INQ48_RS28495 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS28495 PF00501 AMP-binding enzyme INQ48_RS28530 PF00005 ABC transporter INQ48_RS28530 PF16326 ABC transporter C-terminal domain INQ48_RS28530 PF12848 ABC transporter INQ48_RS28535 PF13091 PLD-like domain INQ48_RS28570 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS28580 PF01494 FAD binding domain INQ48_RS28625 PF03783 Curli production assembly/transport component CsgG INQ48_RS28635 PF00202 Aminotransferase class-III INQ48_RS28640 PF00551 Formyl transferase INQ48_RS28655 PF02785 Biotin carboxylase C-terminal domain INQ48_RS28655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS28655 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS28660 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS28660 PF00501 AMP-binding enzyme INQ48_RS28665 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS28670 PF13458 Periplasmic binding protein INQ48_RS28675 PF00289 Biotin carboxylase, N-terminal domain INQ48_RS28675 PF00364 Biotin-requiring enzyme INQ48_RS28675 PF02785 Biotin carboxylase C-terminal domain INQ48_RS28675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain INQ48_RS28680 PF02682 Carboxyltransferase domain, subdomain C and D INQ48_RS28685 PF03746 LamB/YcsF family INQ48_RS28690 PF07840 FadR C-terminal domain INQ48_RS28690 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS28700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS28715 PF00667 FAD binding domain INQ48_RS28715 PF00258 Flavodoxin INQ48_RS28715 PF00175 Oxidoreductase NAD-binding domain INQ48_RS28715 PF00067 Cytochrome P450 INQ48_RS28720 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS28720 PF00072 Response regulator receiver domain INQ48_RS28745 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain INQ48_RS28745 PF06974 Protein of unknown function (DUF1298) INQ48_RS28750 PF00326 Prolyl oligopeptidase family INQ48_RS28750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain INQ48_RS28755 PF00491 Arginase family INQ48_RS28770 PF00485 Phosphoribulokinase / Uridine kinase family INQ48_RS28780 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ48_RS28780 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ48_RS28790 PF18327 Proline utilization A proline dehydrogenase N-terminal domain INQ48_RS28790 PF00171 Aldehyde dehydrogenase family INQ48_RS28790 PF01619 Proline dehydrogenase INQ48_RS28790 PF14850 DNA-binding domain of Proline dehydrogenase INQ48_RS28795 PF01037 Lrp/AsnC ligand binding domain INQ48_RS28800 PF01168 Alanine racemase, N-terminal domain INQ48_RS28805 PF00437 Type II/IV secretion system protein INQ48_RS28810 PF00437 Type II/IV secretion system protein INQ48_RS28820 PF00376 MerR family regulatory protein INQ48_RS28820 PF09278 MerR, DNA binding INQ48_RS28825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS28825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS28835 PF13580 SIS domain INQ48_RS28840 PF02021 Uncharacterised protein family UPF0102 INQ48_RS28845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases INQ48_RS28855 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS28860 PF01220 Dehydroquinase class II INQ48_RS28865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS28870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS28880 PF13360 PQQ-like domain INQ48_RS28880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS28890 PF00436 Single-strand binding protein family INQ48_RS28895 PF00654 Voltage gated chloride channel INQ48_RS28900 PF17760 UvrA interaction domain INQ48_RS28900 PF17755 UvrA DNA-binding domain INQ48_RS28920 PF00137 ATP synthase subunit C INQ48_RS28930 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS28935 PF11862 Domain of unknown function (DUF3382) INQ48_RS28935 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS28940 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS28940 PF00005 ABC transporter INQ48_RS28945 PF00005 ABC transporter INQ48_RS28955 PF07690 Major Facilitator Superfamily INQ48_RS28960 PF12852 Cupin INQ48_RS28960 PF12833 Helix-turn-helix domain INQ48_RS28965 PF00916 Sulfate permease family INQ48_RS28965 PF01740 STAS domain INQ48_RS28980 PF00890 FAD binding domain INQ48_RS28995 PF00005 ABC transporter INQ48_RS29000 PF00005 ABC transporter INQ48_RS29000 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS29005 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS29005 PF11862 Domain of unknown function (DUF3382) INQ48_RS29010 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS29030 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS29030 PF16295 Tetracyclin repressor-like, C-terminal domain INQ48_RS29035 PF01613 Flavin reductase like domain INQ48_RS29045 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS29050 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29055 PF04199 Putative cyclase INQ48_RS29060 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS29065 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS29070 PF13609 Gram-negative porin INQ48_RS29080 PF01494 FAD binding domain INQ48_RS29085 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29090 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29095 PF01494 FAD binding domain INQ48_RS29100 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS29105 PF07883 Cupin domain INQ48_RS29110 PF03466 LysR substrate binding domain INQ48_RS29110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29140 PF04244 Deoxyribodipyrimidine photo-lyase-related protein INQ48_RS29145 PF12973 ChrR Cupin-like domain INQ48_RS29150 PF04545 Sigma-70, region 4 INQ48_RS29150 PF04542 Sigma-70 region 2 INQ48_RS29160 PF01791 DeoC/LacD family aldolase INQ48_RS29165 PF00248 Aldo/keto reductase family INQ48_RS29170 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS29175 PF00005 ABC transporter INQ48_RS29185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS29185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS29190 PF16901 C-terminal domain of alpha-glycerophosphate oxidase INQ48_RS29190 PF01266 FAD dependent oxidoreductase INQ48_RS29195 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS29195 PF07702 UTRA domain INQ48_RS29205 PF02515 CoA-transferase family III INQ48_RS29210 PF12833 Helix-turn-helix domain INQ48_RS29215 PF13407 Periplasmic binding protein domain INQ48_RS29220 PF00005 ABC transporter INQ48_RS29225 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS29230 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS29230 PF00107 Zinc-binding dehydrogenase INQ48_RS29235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS29235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS29255 PF00384 Molybdopterin oxidoreductase INQ48_RS29255 PF01568 Molydopterin dinucleotide binding domain INQ48_RS29255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS29270 PF07687 Peptidase dimerisation domain INQ48_RS29270 PF01546 Peptidase family M20/M25/M40 INQ48_RS29280 PF01546 Peptidase family M20/M25/M40 INQ48_RS29280 PF07687 Peptidase dimerisation domain INQ48_RS29285 PF04286 Protein of unknown function (DUF445) INQ48_RS29300 PF03309 Type III pantothenate kinase INQ48_RS29305 PF01476 LysM domain INQ48_RS29305 PF04972 BON domain INQ48_RS29315 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS29325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS29325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS29330 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29335 PF00682 HMGL-like INQ48_RS29340 PF02515 CoA-transferase family III INQ48_RS29345 PF07690 Major Facilitator Superfamily INQ48_RS29350 PF03466 LysR substrate binding domain INQ48_RS29350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29355 PF02896 PEP-utilising enzyme, TIM barrel domain INQ48_RS29355 PF00391 PEP-utilising enzyme, mobile domain INQ48_RS29355 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain INQ48_RS29360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain INQ48_RS29360 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS29365 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS29365 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS29375 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS29380 PF00005 ABC transporter INQ48_RS29380 PF08402 TOBE domain INQ48_RS29400 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus INQ48_RS29400 PF01048 Phosphorylase superfamily INQ48_RS29405 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29415 PF00067 Cytochrome P450 INQ48_RS29425 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS29430 PF03466 LysR substrate binding domain INQ48_RS29430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29445 PF00005 ABC transporter INQ48_RS29450 PF01061 ABC-2 type transporter INQ48_RS29465 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS29465 PF00563 EAL domain INQ48_RS29465 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS29470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS29470 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS29470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS29480 PF00270 DEAD/DEAH box helicase INQ48_RS29480 PF00271 Helicase conserved C-terminal domain INQ48_RS29485 PF01253 Translation initiation factor SUI1 INQ48_RS29490 PF12843 Putative quorum-sensing-regulated virulence factor INQ48_RS29495 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) INQ48_RS29500 PF07331 Tripartite tricarboxylate transporter TctB family INQ48_RS29505 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS29510 PF01925 Sulfite exporter TauE/SafE INQ48_RS29515 PF00909 Ammonium Transporter Family INQ48_RS29525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS29525 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS29525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS29530 PF00155 Aminotransferase class I and II INQ48_RS29540 PF00171 Aldehyde dehydrogenase family INQ48_RS29555 PF00005 ABC transporter INQ48_RS29555 PF08402 TOBE domain INQ48_RS29560 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS29565 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS29575 PF04324 BFD-like [2Fe-2S] binding domain INQ48_RS29575 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS29590 PF07690 Major Facilitator Superfamily INQ48_RS29595 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS29595 PF02909 Tetracyclin repressor-like, C-terminal domain INQ48_RS29600 PF05199 GMC oxidoreductase INQ48_RS29600 PF00732 GMC oxidoreductase INQ48_RS29605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29605 PF03466 LysR substrate binding domain INQ48_RS29610 PF02405 Permease MlaE INQ48_RS29615 PF00005 ABC transporter INQ48_RS29615 PF09383 NIL domain INQ48_RS29655 PF01494 FAD binding domain INQ48_RS29665 PF04209 homogentisate 1,2-dioxygenase INQ48_RS29670 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29675 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS29680 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS29685 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29695 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS29695 PF07729 FCD domain INQ48_RS29710 PF00676 Dehydrogenase E1 component INQ48_RS29715 PF02780 Transketolase, C-terminal domain INQ48_RS29715 PF02779 Transketolase, pyrimidine binding domain INQ48_RS29725 PF00578 AhpC/TSA family INQ48_RS29730 PF03466 LysR substrate binding domain INQ48_RS29730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29740 PF03466 LysR substrate binding domain INQ48_RS29740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29745 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29760 PF01494 FAD binding domain INQ48_RS29770 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS29775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS29775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS29775 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS29780 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS29780 PF00501 AMP-binding enzyme INQ48_RS29795 PF01196 Ribosomal protein L17 INQ48_RS29800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain INQ48_RS29800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain INQ48_RS29800 PF01000 RNA polymerase Rpb3/RpoA insert domain INQ48_RS29805 PF00163 Ribosomal protein S4/S9 N-terminal domain INQ48_RS29805 PF01479 S4 domain INQ48_RS29810 PF00411 Ribosomal protein S11 INQ48_RS29815 PF00416 Ribosomal protein S13/S18 INQ48_RS29820 PF00444 Ribosomal protein L36 INQ48_RS29825 PF00344 SecY translocase INQ48_RS29830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A INQ48_RS29835 PF00327 Ribosomal protein L30p/L7e INQ48_RS29840 PF00333 Ribosomal protein S5, N-terminal domain INQ48_RS29840 PF03719 Ribosomal protein S5, C-terminal domain INQ48_RS29845 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast INQ48_RS29850 PF00347 Ribosomal protein L6 INQ48_RS29855 PF00410 Ribosomal protein S8 INQ48_RS29860 PF00253 Ribosomal protein S14p/S29e INQ48_RS29865 PF00281 Ribosomal protein L5 INQ48_RS29865 PF00673 ribosomal L5P family C-terminus INQ48_RS29870 PF00467 KOW motif INQ48_RS29870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 INQ48_RS29875 PF00238 Ribosomal protein L14p/L23e INQ48_RS29885 PF14748 Pyrroline-5-carboxylate reductase dimerisation INQ48_RS29885 PF03807 NADP oxidoreductase coenzyme F420-dependent INQ48_RS29890 PF01575 MaoC like domain INQ48_RS29895 PF01040 UbiA prenyltransferase family INQ48_RS29900 PF00210 Ferritin-like domain INQ48_RS29905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29905 PF03466 LysR substrate binding domain INQ48_RS29915 PF03466 LysR substrate binding domain INQ48_RS29915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS29920 PF01212 Beta-eliminating lyase INQ48_RS29925 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS29930 PF17991 Thioredoxin like C-terminal domain INQ48_RS29930 PF00578 AhpC/TSA family INQ48_RS29930 PF02683 Cytochrome C biogenesis protein transmembrane region INQ48_RS29935 PF00072 Response regulator receiver domain INQ48_RS29935 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS29940 PF02566 OsmC-like protein INQ48_RS29945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS29945 PF00672 HAMP domain INQ48_RS29945 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS29950 PF17991 Thioredoxin like C-terminal domain INQ48_RS29950 PF00578 AhpC/TSA family INQ48_RS29950 PF02683 Cytochrome C biogenesis protein transmembrane region INQ48_RS29955 PF01810 LysE type translocator INQ48_RS29960 PF17191 RecG wedge domain INQ48_RS29960 PF00271 Helicase conserved C-terminal domain INQ48_RS29960 PF00270 DEAD/DEAH box helicase INQ48_RS29975 PF02547 Queuosine biosynthesis protein INQ48_RS29980 PF13476 AAA domain INQ48_RS29990 PF01702 Queuine tRNA-ribosyltransferase INQ48_RS30040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family INQ48_RS30055 PF00814 Glycoprotease family INQ48_RS30065 PF00455 DeoR C terminal sensor domain INQ48_RS30065 PF08220 DeoR-like helix-turn-helix domain INQ48_RS30070 PF00293 NUDIX domain INQ48_RS30075 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family INQ48_RS30085 PF01300 Telomere recombination INQ48_RS30085 PF03481 Putative GTP-binding controlling metal-binding INQ48_RS30090 PF02222 ATP-grasp domain INQ48_RS30090 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain INQ48_RS30095 PF00731 AIR carboxylase INQ48_RS30100 PF00085 Thioredoxin INQ48_RS30105 PF01381 Helix-turn-helix INQ48_RS30110 PF07804 HipA-like C-terminal domain INQ48_RS30110 PF13657 HipA N-terminal domain INQ48_RS30125 PF01259 SAICAR synthetase INQ48_RS30130 PF01116 Fructose-bisphosphate aldolase class-II INQ48_RS30140 PF00224 Pyruvate kinase, barrel domain INQ48_RS30140 PF02887 Pyruvate kinase, alpha/beta domain INQ48_RS30145 PF00162 Phosphoglycerate kinase INQ48_RS30150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS30150 PF03466 LysR substrate binding domain INQ48_RS30165 PF01494 FAD binding domain INQ48_RS30180 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS30185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS30185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS30200 PF02911 Formyl transferase, C-terminal domain INQ48_RS30200 PF00551 Formyl transferase INQ48_RS30210 PF01327 Polypeptide deformylase INQ48_RS30220 PF02481 DNA recombination-mediator protein A INQ48_RS30220 PF17782 DprA winged helix domain INQ48_RS30225 PF04361 Protein of unknown function (DUF494) INQ48_RS30235 PF02355 Protein export membrane protein INQ48_RS30235 PF07549 SecD/SecF GG Motif INQ48_RS30240 PF07549 SecD/SecF GG Motif INQ48_RS30240 PF13721 SecD export protein N-terminal TM region INQ48_RS30240 PF02355 Protein export membrane protein INQ48_RS30245 PF02699 Preprotein translocase subunit INQ48_RS30260 PF01037 Lrp/AsnC ligand binding domain INQ48_RS30265 PF13296 Putative type VI secretion system Rhs element Vgr INQ48_RS30265 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS30265 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) INQ48_RS30280 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS30285 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS30290 PF05977 Transmembrane secretion effector INQ48_RS30295 PF07690 Major Facilitator Superfamily INQ48_RS30300 PF02633 Creatinine amidohydrolase INQ48_RS30305 PF00005 ABC transporter INQ48_RS30310 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS30330 PF00175 Oxidoreductase NAD-binding domain INQ48_RS30330 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS30340 PF01042 Endoribonuclease L-PSP INQ48_RS30350 PF01261 Xylose isomerase-like TIM barrel INQ48_RS30355 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS30360 PF07005 Sugar-binding N-terminal domain INQ48_RS30360 PF17042 Nucleotide-binding C-terminal domain INQ48_RS30365 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS30375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS30375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS30380 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS30380 PF07729 FCD domain INQ48_RS30400 PF12833 Helix-turn-helix domain INQ48_RS30400 PF01965 DJ-1/PfpI family INQ48_RS30405 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS30405 PF17831 Pyruvate dehydrogenase E1 component middle domain INQ48_RS30410 PF01037 Lrp/AsnC ligand binding domain INQ48_RS30445 PF00072 Response regulator receiver domain INQ48_RS30445 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS30450 PF00989 PAS fold INQ48_RS30450 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS30450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS30455 PF00795 Carbon-nitrogen hydrolase INQ48_RS30465 PF08335 GlnD PII-uridylyltransferase INQ48_RS30465 PF03710 Glutamate-ammonia ligase adenylyltransferase INQ48_RS30475 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS30480 PF12680 SnoaL-like domain INQ48_RS30480 PF08281 Sigma-70, region 4 INQ48_RS30480 PF04542 Sigma-70 region 2 INQ48_RS30490 PF00255 Glutathione peroxidase INQ48_RS30495 PF01593 Flavin containing amine oxidoreductase INQ48_RS30510 PF13417 Glutathione S-transferase, N-terminal domain INQ48_RS30510 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS30515 PF00206 Lyase INQ48_RS30515 PF08328 Adenylosuccinate lyase C-terminal INQ48_RS30525 PF07660 Secretin and TonB N terminus short domain INQ48_RS30525 PF00593 TonB dependent receptor INQ48_RS30525 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS30530 PF07152 YaeQ protein INQ48_RS30545 PF03741 Integral membrane protein TerC family INQ48_RS30555 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV INQ48_RS30560 PF13181 Tetratricopeptide repeat INQ48_RS30560 PF01435 Peptidase family M48 INQ48_RS30565 PF01967 MoaC family INQ48_RS30575 PF00114 Pilin (bacterial filament) INQ48_RS30575 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS30600 PF05567 Neisseria PilC beta-propeller domain INQ48_RS30620 PF00114 Pilin (bacterial filament) INQ48_RS30620 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS30630 PF00211 Adenylate and Guanylate cyclase catalytic domain INQ48_RS30635 PF00498 FHA domain INQ48_RS30645 PF03741 Integral membrane protein TerC family INQ48_RS30650 PF00549 CoA-ligase INQ48_RS30650 PF02629 CoA binding domain INQ48_RS30655 PF00549 CoA-ligase INQ48_RS30655 PF08442 ATP-grasp domain INQ48_RS30660 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ48_RS30675 PF02631 RecX family INQ48_RS30680 PF00154 recA bacterial DNA recombination protein INQ48_RS30690 PF00072 Response regulator receiver domain INQ48_RS30690 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS30695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS30695 PF08521 Two-component sensor kinase N-terminal INQ48_RS30695 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS30705 PF03099 Biotin/lipoate A/B protein ligase family INQ48_RS30705 PF08279 HTH domain INQ48_RS30705 PF02237 Biotin protein ligase C terminal domain INQ48_RS30715 PF01131 DNA topoisomerase INQ48_RS30715 PF01751 Toprim domain INQ48_RS30720 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS30725 PF00106 short chain dehydrogenase INQ48_RS30735 PF07722 Peptidase C26 INQ48_RS30755 PF07690 Major Facilitator Superfamily INQ48_RS30760 PF01176 Translation initiation factor 1A / IF-1 INQ48_RS30765 PF03880 DbpA RNA binding domain INQ48_RS30765 PF00270 DEAD/DEAH box helicase INQ48_RS30765 PF00271 Helicase conserved C-terminal domain INQ48_RS30770 PF01554 MatE INQ48_RS30785 PF07739 TipAS antibiotic-recognition domain INQ48_RS30785 PF13411 MerR HTH family regulatory protein INQ48_RS30795 PF03466 LysR substrate binding domain INQ48_RS30795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS30800 PF00892 EamA-like transporter family INQ48_RS30810 PF01361 Tautomerase enzyme INQ48_RS30815 PF07729 FCD domain INQ48_RS30815 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS30820 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS30820 PF17806 Sarcosine oxidase A3 domain INQ48_RS30830 PF01266 FAD dependent oxidoreductase INQ48_RS30835 PF05544 Proline racemase INQ48_RS30840 PF13458 Periplasmic binding protein INQ48_RS30845 PF00701 Dihydrodipicolinate synthetase family INQ48_RS30855 PF07804 HipA-like C-terminal domain INQ48_RS30855 PF13657 HipA N-terminal domain INQ48_RS30870 PF07687 Peptidase dimerisation domain INQ48_RS30870 PF01546 Peptidase family M20/M25/M40 INQ48_RS30875 PF05726 Pirin C-terminal cupin domain INQ48_RS30875 PF02678 Pirin INQ48_RS30885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS30885 PF03466 LysR substrate binding domain INQ48_RS30890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase INQ48_RS30910 PF05726 Pirin C-terminal cupin domain INQ48_RS30910 PF02678 Pirin INQ48_RS30920 PF01566 Natural resistance-associated macrophage protein INQ48_RS30940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain INQ48_RS30940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain INQ48_RS30945 PF02780 Transketolase, C-terminal domain INQ48_RS30945 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS30945 PF02779 Transketolase, pyrimidine binding domain INQ48_RS30950 PF02675 S-adenosylmethionine decarboxylase INQ48_RS30955 PF00483 Nucleotidyl transferase INQ48_RS30960 PF00557 Metallopeptidase family M24 INQ48_RS30960 PF05195 Aminopeptidase P, N-terminal domain INQ48_RS30985 PF00905 Penicillin binding protein transpeptidase domain INQ48_RS30985 PF00912 Transglycosylase INQ48_RS30985 PF06832 Penicillin-Binding Protein C-terminus Family INQ48_RS30990 PF01835 MG2 domain INQ48_RS30990 PF07703 Alpha-2-macroglobulin bait region domain INQ48_RS30990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain INQ48_RS30990 PF17962 Bacterial macroglobulin domain 6 INQ48_RS30990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain INQ48_RS30990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain INQ48_RS30990 PF00207 Alpha-2-macroglobulin family INQ48_RS31040 PF01515 Phosphate acetyl/butaryl transferase INQ48_RS31040 PF03949 Malic enzyme, NAD binding domain INQ48_RS31040 PF00390 Malic enzyme, N-terminal domain INQ48_RS31045 PF00545 ribonuclease INQ48_RS31060 PF00398 Ribosomal RNA adenine dimethylase INQ48_RS31065 PF09312 SurA N-terminal domain INQ48_RS31065 PF00639 PPIC-type PPIASE domain INQ48_RS31070 PF04453 LPS transport system D INQ48_RS31075 PF01636 Phosphotransferase enzyme family INQ48_RS31080 PF04452 RNA methyltransferase INQ48_RS31095 PF07690 Major Facilitator Superfamily INQ48_RS31105 PF12146 Serine aminopeptidase, S33 INQ48_RS31125 PF00520 Ion transport protein INQ48_RS31125 PF00027 Cyclic nucleotide-binding domain INQ48_RS31130 PF01205 Uncharacterized protein family UPF0029 INQ48_RS31130 PF09186 Domain of unknown function (DUF1949) INQ48_RS31135 PF07021 Methionine biosynthesis protein MetW INQ48_RS31135 PF00561 alpha/beta hydrolase fold INQ48_RS31140 PF00561 alpha/beta hydrolase fold INQ48_RS31145 PF01169 Uncharacterized protein family UPF0016 INQ48_RS31150 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) INQ48_RS31155 PF00106 short chain dehydrogenase INQ48_RS31170 PF01380 SIS domain INQ48_RS31170 PF00571 CBS domain INQ48_RS31175 PF02254 TrkA-N domain INQ48_RS31175 PF02080 TrkA-C domain INQ48_RS31175 PF00999 Sodium/hydrogen exchanger family INQ48_RS31185 PF01740 STAS domain INQ48_RS31185 PF04960 Glutaminase INQ48_RS31185 PF00027 Cyclic nucleotide-binding domain INQ48_RS31190 PF10396 GTP-binding protein TrmE N-terminus INQ48_RS31190 PF01926 50S ribosome-binding GTPase INQ48_RS31190 PF12631 MnmE helical domain INQ48_RS31195 PF02096 60Kd inner membrane protein INQ48_RS31195 PF14849 YidC periplasmic domain INQ48_RS31200 PF01809 Putative membrane protein insertion efficiency factor INQ48_RS31205 PF00825 Ribonuclease P INQ48_RS31210 PF00468 Ribosomal protein L34 INQ48_RS31230 PF12849 PBP superfamily domain INQ48_RS31235 PF00482 Type II secretion system (T2SS), protein F INQ48_RS31240 PF00437 Type II/IV secretion system protein INQ48_RS31245 PF00263 Bacterial type II and III secretion system protein INQ48_RS31245 PF03958 Bacterial type II/III secretion system short domain INQ48_RS31265 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS31265 PF08334 Type II secretion system (T2SS), protein G INQ48_RS31295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS31295 PF03466 LysR substrate binding domain INQ48_RS31300 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31305 PF00857 Isochorismatase family INQ48_RS31315 PF02426 Muconolactone delta-isomerase INQ48_RS31340 PF07687 Peptidase dimerisation domain INQ48_RS31340 PF01546 Peptidase family M20/M25/M40 INQ48_RS31345 PF00155 Aminotransferase class I and II INQ48_RS31350 PF07687 Peptidase dimerisation domain INQ48_RS31350 PF01546 Peptidase family M20/M25/M40 INQ48_RS31365 PF07519 Tannase and feruloyl esterase INQ48_RS31370 PF07702 UTRA domain INQ48_RS31370 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS31380 PF00330 Aconitase family (aconitate hydratase) INQ48_RS31385 PF00694 Aconitase C-terminal domain INQ48_RS31395 PF04303 PrpF protein INQ48_RS31400 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31405 PF04303 PrpF protein INQ48_RS31415 PF00106 short chain dehydrogenase INQ48_RS31425 PF00246 Zinc carboxypeptidase INQ48_RS31430 PF01425 Amidase INQ48_RS31440 PF00246 Zinc carboxypeptidase INQ48_RS31445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS31445 PF03466 LysR substrate binding domain INQ48_RS31470 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS31470 PF00501 AMP-binding enzyme INQ48_RS31475 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS31475 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS31480 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS31490 PF03466 LysR substrate binding domain INQ48_RS31490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS31495 PF14552 Tautomerase enzyme INQ48_RS31500 PF09278 MerR, DNA binding INQ48_RS31500 PF00376 MerR family regulatory protein INQ48_RS31505 PF07859 alpha/beta hydrolase fold INQ48_RS31525 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS31535 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS31535 PF00672 HAMP domain INQ48_RS31540 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS31540 PF00072 Response regulator receiver domain INQ48_RS31565 PF00005 ABC transporter INQ48_RS31570 PF00005 ABC transporter INQ48_RS31570 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS31580 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS31585 PF13458 Periplasmic binding protein INQ48_RS31590 PF09084 NMT1/THI5 like INQ48_RS31605 PF08681 Protein of unknown function (DUF1778) INQ48_RS31615 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS31620 PF00296 Luciferase-like monooxygenase INQ48_RS31625 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS31625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS31630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31635 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31640 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS31645 PF00005 ABC transporter INQ48_RS31650 PF00881 Nitroreductase family INQ48_RS31655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS31655 PF00005 ABC transporter INQ48_RS31660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31665 PF03180 NLPA lipoprotein INQ48_RS31670 PF09084 NMT1/THI5 like INQ48_RS31675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS31675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS31680 PF00248 Aldo/keto reductase family INQ48_RS31685 PF00296 Luciferase-like monooxygenase INQ48_RS31700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31705 PF01425 Amidase INQ48_RS31710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31725 PF05368 NmrA-like family INQ48_RS31735 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS31740 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31745 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31750 PF00005 ABC transporter INQ48_RS31760 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS31765 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS31765 PF01968 Hydantoinase/oxoprolinase INQ48_RS31780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS31795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS31795 PF00005 ABC transporter INQ48_RS31800 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS31800 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31805 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31815 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31820 PF13454 FAD-NAD(P)-binding INQ48_RS31825 PF03466 LysR substrate binding domain INQ48_RS31825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS31840 PF00296 Luciferase-like monooxygenase INQ48_RS31845 PF00296 Luciferase-like monooxygenase INQ48_RS31855 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS31855 PF00155 Aminotransferase class I and II INQ48_RS31865 PF04303 PrpF protein INQ48_RS31870 PF00330 Aconitase family (aconitate hydratase) INQ48_RS31870 PF00694 Aconitase C-terminal domain INQ48_RS31875 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31880 PF00285 Citrate synthase, C-terminal domain INQ48_RS31890 PF01381 Helix-turn-helix INQ48_RS31890 PF06114 IrrE N-terminal-like domain INQ48_RS31890 PF09856 Predicted transcriptional regulator (DUF2083) INQ48_RS31900 PF17932 Tetracyclin repressor-like, C-terminal domain INQ48_RS31900 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS31905 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS31910 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS31920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family INQ48_RS31920 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS31930 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS31940 PF02515 CoA-transferase family III INQ48_RS31945 PF17912 MalK OB fold domain INQ48_RS31945 PF00005 ABC transporter INQ48_RS31950 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31955 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS31985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain INQ48_RS31985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold INQ48_RS31990 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS31995 PF00175 Oxidoreductase NAD-binding domain INQ48_RS31995 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS32000 PF00355 Rieske [2Fe-2S] domain INQ48_RS32000 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS32005 PF02608 ABC transporter substrate-binding protein PnrA-like INQ48_RS32010 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS32010 PF07729 FCD domain INQ48_RS32020 PF00202 Aminotransferase class-III INQ48_RS32025 PF00005 ABC transporter INQ48_RS32025 PF08402 TOBE domain INQ48_RS32030 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS32030 PF07729 FCD domain INQ48_RS32035 PF00850 Histone deacetylase domain INQ48_RS32045 PF00850 Histone deacetylase domain INQ48_RS32055 PF01063 Amino-transferase class IV INQ48_RS32060 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32065 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32075 PF02780 Transketolase, C-terminal domain INQ48_RS32075 PF02779 Transketolase, pyrimidine binding domain INQ48_RS32075 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS32080 PF02779 Transketolase, pyrimidine binding domain INQ48_RS32080 PF02780 Transketolase, C-terminal domain INQ48_RS32120 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32125 PF03358 NADPH-dependent FMN reductase INQ48_RS32130 PF00199 Catalase INQ48_RS32130 PF06628 Catalase-related immune-responsive INQ48_RS32165 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS32170 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS32175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32175 PF03466 LysR substrate binding domain INQ48_RS32185 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32190 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS32195 PF01042 Endoribonuclease L-PSP INQ48_RS32200 PF02630 SCO1/SenC INQ48_RS32210 PF00593 TonB dependent receptor INQ48_RS32210 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS32225 PF00384 Molybdopterin oxidoreductase INQ48_RS32225 PF01568 Molydopterin dinucleotide binding domain INQ48_RS32230 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS32230 PF00175 Oxidoreductase NAD-binding domain INQ48_RS32240 PF00156 Phosphoribosyl transferase domain INQ48_RS32250 PF01979 Amidohydrolase family INQ48_RS32255 PF07687 Peptidase dimerisation domain INQ48_RS32255 PF01546 Peptidase family M20/M25/M40 INQ48_RS32260 PF01180 Dihydroorotate dehydrogenase INQ48_RS32265 PF00970 Oxidoreductase FAD-binding domain INQ48_RS32265 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B INQ48_RS32270 PF07690 Major Facilitator Superfamily INQ48_RS32285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32285 PF03466 LysR substrate binding domain INQ48_RS32295 PF03466 LysR substrate binding domain INQ48_RS32295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32300 PF14765 Polyketide synthase dehydratase INQ48_RS32300 PF00550 Phosphopantetheine attachment site INQ48_RS32300 PF08659 KR domain INQ48_RS32300 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS32300 PF00698 Acyl transferase domain INQ48_RS32320 PF13533 Biotin-lipoyl like INQ48_RS32325 PF07690 Major Facilitator Superfamily INQ48_RS32330 PF01638 HxlR-like helix-turn-helix INQ48_RS32335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32335 PF03466 LysR substrate binding domain INQ48_RS32340 PF00850 Histone deacetylase domain INQ48_RS32345 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS32350 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS32355 PF00005 ABC transporter INQ48_RS32360 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS32360 PF00005 ABC transporter INQ48_RS32370 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32375 PF01425 Amidase INQ48_RS32380 PF14525 AraC-binding-like domain INQ48_RS32380 PF12833 Helix-turn-helix domain INQ48_RS32390 PF00171 Aldehyde dehydrogenase family INQ48_RS32395 PF00202 Aminotransferase class-III INQ48_RS32410 PF00202 Aminotransferase class-III INQ48_RS32435 PF01425 Amidase INQ48_RS32440 PF00005 ABC transporter INQ48_RS32445 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32450 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32455 PF09084 NMT1/THI5 like INQ48_RS32460 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS32465 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS32470 PF01494 FAD binding domain INQ48_RS32485 PF03466 LysR substrate binding domain INQ48_RS32485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32490 PF02661 Fic/DOC family INQ48_RS32495 PF00563 EAL domain INQ48_RS32495 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS32495 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS32505 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS32505 PF00563 EAL domain INQ48_RS32505 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS32515 PF01565 FAD binding domain INQ48_RS32515 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS32520 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32525 PF00484 Carbonic anhydrase INQ48_RS32540 PF00171 Aldehyde dehydrogenase family INQ48_RS32545 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS32550 PF01012 Electron transfer flavoprotein domain INQ48_RS32555 PF00766 Electron transfer flavoprotein FAD-binding domain INQ48_RS32555 PF01012 Electron transfer flavoprotein domain INQ48_RS32560 PF03466 LysR substrate binding domain INQ48_RS32560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32570 PF02515 CoA-transferase family III INQ48_RS32575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS32575 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS32575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS32585 PF02954 Bacterial regulatory protein, Fis family INQ48_RS32585 PF13426 PAS domain INQ48_RS32585 PF00158 Sigma-54 interaction domain INQ48_RS32590 PF13458 Periplasmic binding protein INQ48_RS32600 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS32605 PF14535 AMP-binding enzyme C-terminal domain INQ48_RS32605 PF00501 AMP-binding enzyme INQ48_RS32625 PF03466 LysR substrate binding domain INQ48_RS32625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS32630 PF07584 Aerotolerance regulator N-terminal INQ48_RS32630 PF00092 von Willebrand factor type A domain INQ48_RS32640 PF13416 Bacterial extracellular solute-binding protein INQ48_RS32645 PF00005 ABC transporter INQ48_RS32645 PF08402 TOBE domain INQ48_RS32650 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32665 PF02742 Iron dependent repressor, metal binding and dimerisation domain INQ48_RS32665 PF01325 Iron dependent repressor, N-terminal DNA binding domain INQ48_RS32670 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS32685 PF00691 OmpA family INQ48_RS32685 PF13677 Membrane MotB of proton-channel complex MotA/MotB INQ48_RS32700 PF01022 Bacterial regulatory protein, arsR family INQ48_RS32705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS32710 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS32710 PF17932 Tetracyclin repressor-like, C-terminal domain INQ48_RS32715 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32720 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS32720 PF00501 AMP-binding enzyme INQ48_RS32725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS32725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS32725 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS32730 PF00108 Thiolase, N-terminal domain INQ48_RS32730 PF02803 Thiolase, C-terminal domain INQ48_RS32735 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS32735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS32735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS32745 PF01494 FAD binding domain INQ48_RS32750 PF02515 CoA-transferase family III INQ48_RS32760 PF00881 Nitroreductase family INQ48_RS32765 PF02515 CoA-transferase family III INQ48_RS32770 PF01494 FAD binding domain INQ48_RS32775 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32780 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS32780 PF00501 AMP-binding enzyme INQ48_RS32785 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS32790 PF07690 Major Facilitator Superfamily INQ48_RS32800 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS32810 PF00005 ABC transporter INQ48_RS32830 PF00072 Response regulator receiver domain INQ48_RS32830 PF13188 PAS domain INQ48_RS32830 PF08448 PAS fold INQ48_RS32830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS32830 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS32835 PF06745 KaiC INQ48_RS32840 PF01925 Sulfite exporter TauE/SafE INQ48_RS32850 PF00535 Glycosyl transferase family 2 INQ48_RS32870 PF00561 alpha/beta hydrolase fold INQ48_RS32875 PF00005 ABC transporter INQ48_RS32880 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS32880 PF00005 ABC transporter INQ48_RS32885 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS32890 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS32895 PF13458 Periplasmic binding protein INQ48_RS32900 PF00107 Zinc-binding dehydrogenase INQ48_RS32900 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS32910 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS32910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS32910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS32930 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS32930 PF00501 AMP-binding enzyme INQ48_RS32935 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS32940 PF12833 Helix-turn-helix domain INQ48_RS32940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term INQ48_RS32945 PF02515 CoA-transferase family III INQ48_RS32955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS32955 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS32955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS32965 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS32965 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS32970 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS32970 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS32975 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS32975 PF01799 [2Fe-2S] binding domain INQ48_RS33000 PF01037 Lrp/AsnC ligand binding domain INQ48_RS33005 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS33020 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS33025 PF11862 Domain of unknown function (DUF3382) INQ48_RS33025 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS33030 PF00005 ABC transporter INQ48_RS33030 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS33035 PF00005 ABC transporter INQ48_RS33040 PF00067 Cytochrome P450 INQ48_RS33050 PF00732 GMC oxidoreductase INQ48_RS33050 PF05199 GMC oxidoreductase INQ48_RS33060 PF00072 Response regulator receiver domain INQ48_RS33060 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS33065 PF12833 Helix-turn-helix domain INQ48_RS33070 PF00561 alpha/beta hydrolase fold INQ48_RS33070 PF00364 Biotin-requiring enzyme INQ48_RS33080 PF01047 MarR family INQ48_RS33085 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS33090 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS33090 PF00072 Response regulator receiver domain INQ48_RS33095 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS33110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33110 PF03466 LysR substrate binding domain INQ48_RS33135 PF01047 MarR family INQ48_RS33150 PF07690 Major Facilitator Superfamily INQ48_RS33155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33155 PF03466 LysR substrate binding domain INQ48_RS33160 PF12833 Helix-turn-helix domain INQ48_RS33160 PF12852 Cupin INQ48_RS33165 PF03466 LysR substrate binding domain INQ48_RS33165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33180 PF03466 LysR substrate binding domain INQ48_RS33180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33185 PF02321 Outer membrane efflux protein INQ48_RS33190 PF13533 Biotin-lipoyl like INQ48_RS33195 PF07869 Protein of unknown function (DUF1656) INQ48_RS33200 PF04632 Fusaric acid resistance protein family INQ48_RS33205 PF12833 Helix-turn-helix domain INQ48_RS33205 PF02311 AraC-like ligand binding domain INQ48_RS33210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33210 PF03466 LysR substrate binding domain INQ48_RS33215 PF00561 alpha/beta hydrolase fold INQ48_RS33220 PF00106 short chain dehydrogenase INQ48_RS33230 PF07690 Major Facilitator Superfamily INQ48_RS33235 PF00248 Aldo/keto reductase family INQ48_RS33270 PF17645 Arylmalonate decarboxylase INQ48_RS33280 PF01494 FAD binding domain INQ48_RS33290 PF00501 AMP-binding enzyme INQ48_RS33290 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS33305 PF08361 MAATS-type transcriptional repressor, C-terminal region INQ48_RS33305 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS33310 PF01638 HxlR-like helix-turn-helix INQ48_RS33315 PF13458 Periplasmic binding protein INQ48_RS33320 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS33325 PF00005 ABC transporter INQ48_RS33325 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS33330 PF00005 ABC transporter INQ48_RS33335 PF00795 Carbon-nitrogen hydrolase INQ48_RS33340 PF01425 Amidase INQ48_RS33350 PF02525 Flavodoxin-like fold INQ48_RS33355 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS33365 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS33375 PF00072 Response regulator receiver domain INQ48_RS33375 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS33380 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33385 PF00501 AMP-binding enzyme INQ48_RS33385 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS33390 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS33395 PF07519 Tannase and feruloyl esterase INQ48_RS33405 PF01804 Penicillin amidase INQ48_RS33410 PF02311 AraC-like ligand binding domain INQ48_RS33410 PF12833 Helix-turn-helix domain INQ48_RS33420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33420 PF03466 LysR substrate binding domain INQ48_RS33430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33430 PF03466 LysR substrate binding domain INQ48_RS33440 PF00106 short chain dehydrogenase INQ48_RS33445 PF00149 Calcineurin-like phosphoesterase INQ48_RS33450 PF01425 Amidase INQ48_RS33455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS33455 PF00005 ABC transporter INQ48_RS33460 PF00005 ABC transporter INQ48_RS33460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS33465 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS33470 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS33480 PF01804 Penicillin amidase INQ48_RS33485 PF01425 Amidase INQ48_RS33490 PF02779 Transketolase, pyrimidine binding domain INQ48_RS33490 PF02780 Transketolase, C-terminal domain INQ48_RS33495 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS33500 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS33500 PF07729 FCD domain INQ48_RS33505 PF00202 Aminotransferase class-III INQ48_RS33510 PF13609 Gram-negative porin INQ48_RS33515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33515 PF03466 LysR substrate binding domain INQ48_RS33535 PF01842 ACT domain INQ48_RS33535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS33535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS33540 PF01968 Hydantoinase/oxoprolinase INQ48_RS33540 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS33550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS33550 PF01627 Hpt domain INQ48_RS33550 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS33550 PF00072 Response regulator receiver domain INQ48_RS33550 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS33550 PF00989 PAS fold INQ48_RS33560 PF09339 IclR helix-turn-helix domain INQ48_RS33560 PF01614 Bacterial transcriptional regulator INQ48_RS33565 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS33570 PF00355 Rieske [2Fe-2S] domain INQ48_RS33575 PF13577 SnoaL-like domain INQ48_RS33580 PF04166 Pyridoxal phosphate biosynthetic protein PdxA INQ48_RS33585 PF00175 Oxidoreductase NAD-binding domain INQ48_RS33585 PF00970 Oxidoreductase FAD-binding domain INQ48_RS33585 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS33590 PF00989 PAS fold INQ48_RS33590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS33590 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS33590 PF18415 Histidine kinase receptor ArcB trans-membrane domain INQ48_RS33590 PF00072 Response regulator receiver domain INQ48_RS33590 PF01627 Hpt domain INQ48_RS33595 PF09308 LuxQ, periplasmic INQ48_RS33595 PF00072 Response regulator receiver domain INQ48_RS33595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS33595 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS33605 PF13581 Histidine kinase-like ATPase domain INQ48_RS33610 PF01740 STAS domain INQ48_RS33615 PF01740 STAS domain INQ48_RS33615 PF08678 Rsbr N terminal INQ48_RS33625 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS33630 PF00694 Aconitase C-terminal domain INQ48_RS33635 PF00330 Aconitase family (aconitate hydratase) INQ48_RS33640 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33645 PF03466 LysR substrate binding domain INQ48_RS33645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33650 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS33655 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33660 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS33665 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS33670 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS33675 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33680 PF00355 Rieske [2Fe-2S] domain INQ48_RS33685 PF01261 Xylose isomerase-like TIM barrel INQ48_RS33690 PF03466 LysR substrate binding domain INQ48_RS33690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33700 PF13378 Enolase C-terminal domain-like INQ48_RS33705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33705 PF03466 LysR substrate binding domain INQ48_RS33720 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33725 PF01872 RibD C-terminal domain INQ48_RS33735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain INQ48_RS33735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase INQ48_RS33750 PF03466 LysR substrate binding domain INQ48_RS33750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33755 PF07690 Major Facilitator Superfamily INQ48_RS33770 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33790 PF01062 Bestrophin, RFP-TM, chloride channel INQ48_RS33795 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS33810 PF01522 Polysaccharide deacetylase INQ48_RS33815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS33815 PF03466 LysR substrate binding domain INQ48_RS33825 PF07690 Major Facilitator Superfamily INQ48_RS33830 PF01042 Endoribonuclease L-PSP INQ48_RS33835 PF01070 FMN-dependent dehydrogenase INQ48_RS33840 PF00005 ABC transporter INQ48_RS33855 PF01565 FAD binding domain INQ48_RS33855 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS33865 PF04209 homogentisate 1,2-dioxygenase INQ48_RS33875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily INQ48_RS33900 PF01037 Lrp/AsnC ligand binding domain INQ48_RS33905 PF02913 FAD linked oxidases, C-terminal domain INQ48_RS33905 PF01565 FAD binding domain INQ48_RS33910 PF00005 ABC transporter INQ48_RS33915 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS33915 PF00005 ABC transporter INQ48_RS33930 PF00175 Oxidoreductase NAD-binding domain INQ48_RS33930 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS33930 PF00970 Oxidoreductase FAD-binding domain INQ48_RS33940 PF02515 CoA-transferase family III INQ48_RS33945 PF00501 AMP-binding enzyme INQ48_RS33945 PF14535 AMP-binding enzyme C-terminal domain INQ48_RS33965 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS33980 PF03797 Autotransporter beta-domain INQ48_RS33990 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family INQ48_RS34000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS34000 PF03466 LysR substrate binding domain INQ48_RS34010 PF13458 Periplasmic binding protein INQ48_RS34040 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS34045 PF07331 Tripartite tricarboxylate transporter TctB family INQ48_RS34050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34055 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS34055 PF00072 Response regulator receiver domain INQ48_RS34060 PF07995 Glucose / Sorbosone dehydrogenase INQ48_RS34065 PF03466 LysR substrate binding domain INQ48_RS34065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS34070 PF00296 Luciferase-like monooxygenase INQ48_RS34075 PF01613 Flavin reductase like domain INQ48_RS34080 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34085 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS34090 PF02515 CoA-transferase family III INQ48_RS34115 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS34120 PF03737 Aldolase/RraA INQ48_RS34145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS34145 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS34145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS34150 PF07690 Major Facilitator Superfamily INQ48_RS34155 PF12833 Helix-turn-helix domain INQ48_RS34155 PF06445 GyrI-like small molecule binding domain INQ48_RS34165 PF08446 PAS fold INQ48_RS34165 PF00360 Phytochrome region INQ48_RS34165 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS34165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34165 PF01590 GAF domain INQ48_RS34170 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS34170 PF00593 TonB dependent receptor INQ48_RS34180 PF01032 FecCD transport family INQ48_RS34185 PF00005 ABC transporter INQ48_RS34195 PF00459 Inositol monophosphatase family INQ48_RS34215 PF00080 Copper/zinc superoxide dismutase (SODC) INQ48_RS34225 PF07689 KaiB domain INQ48_RS34225 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS34225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34230 PF12697 Alpha/beta hydrolase family INQ48_RS34255 PF13545 Crp-like helix-turn-helix domain INQ48_RS34255 PF00027 Cyclic nucleotide-binding domain INQ48_RS34260 PF06628 Catalase-related immune-responsive INQ48_RS34260 PF18011 C-terminal domain found in long catalases INQ48_RS34260 PF00199 Catalase INQ48_RS34275 PF00005 ABC transporter INQ48_RS34285 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34290 PF04909 Amidohydrolase INQ48_RS34295 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34300 PF03737 Aldolase/RraA INQ48_RS34305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS34305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS34310 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34315 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34320 PF04909 Amidohydrolase INQ48_RS34330 PF07702 UTRA domain INQ48_RS34330 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS34335 PF01575 MaoC like domain INQ48_RS34340 PF02515 CoA-transferase family III INQ48_RS34345 PF02515 CoA-transferase family III INQ48_RS34350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS34350 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS34350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS34360 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34365 PF04909 Amidohydrolase INQ48_RS34370 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS34375 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34380 PF00171 Aldehyde dehydrogenase family INQ48_RS34385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS34385 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS34385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS34390 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34400 PF01070 FMN-dependent dehydrogenase INQ48_RS34410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain INQ48_RS34410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain INQ48_RS34415 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS34420 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS34420 PF03737 Aldolase/RraA INQ48_RS34425 PF07729 FCD domain INQ48_RS34425 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS34430 PF00106 short chain dehydrogenase INQ48_RS34435 PF06719 AraC-type transcriptional regulator N-terminus INQ48_RS34435 PF12833 Helix-turn-helix domain INQ48_RS34440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS34440 PF03466 LysR substrate binding domain INQ48_RS34445 PF02515 CoA-transferase family III INQ48_RS34450 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS34455 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34470 PF00271 Helicase conserved C-terminal domain INQ48_RS34470 PF00570 HRDC domain INQ48_RS34470 PF00270 DEAD/DEAH box helicase INQ48_RS34470 PF16124 RecQ zinc-binding INQ48_RS34470 PF09382 RQC domain INQ48_RS34480 PF00557 Metallopeptidase family M24 INQ48_RS34490 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS34495 PF06441 Epoxide hydrolase N terminus INQ48_RS34500 PF01037 Lrp/AsnC ligand binding domain INQ48_RS34505 PF00282 Pyridoxal-dependent decarboxylase conserved domain INQ48_RS34510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34510 PF00672 HAMP domain INQ48_RS34510 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS34515 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS34515 PF00072 Response regulator receiver domain INQ48_RS34520 PF00072 Response regulator receiver domain INQ48_RS34520 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS34525 PF08447 PAS fold INQ48_RS34525 PF13426 PAS domain INQ48_RS34525 PF00989 PAS fold INQ48_RS34525 PF13493 Domain of unknown function (DUF4118) INQ48_RS34525 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS34525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34545 PF04909 Amidohydrolase INQ48_RS34555 PF02558 Ketopantoate reductase PanE/ApbA INQ48_RS34555 PF08546 Ketopantoate reductase PanE/ApbA C terminal INQ48_RS34620 PF00765 Autoinducer synthase INQ48_RS34625 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS34625 PF03472 Autoinducer binding domain INQ48_RS34630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS34630 PF00072 Response regulator receiver domain INQ48_RS34630 PF07495 Y_Y_Y domain INQ48_RS34630 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS34630 PF12833 Helix-turn-helix domain INQ48_RS34630 PF07494 Two component regulator propeller INQ48_RS34635 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS34640 PF02472 Biopolymer transport protein ExbD/TolR INQ48_RS34645 PF01618 MotA/TolQ/ExbB proton channel family INQ48_RS34660 PF01042 Endoribonuclease L-PSP INQ48_RS34665 PF00155 Aminotransferase class I and II INQ48_RS34680 PF00144 Beta-lactamase INQ48_RS34690 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain INQ48_RS34690 PF13378 Enolase C-terminal domain-like INQ48_RS34695 PF00593 TonB dependent receptor INQ48_RS34695 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS34715 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) INQ48_RS34745 PF12796 Ankyrin repeats (3 copies) INQ48_RS34745 PF00023 Ankyrin repeat INQ48_RS34770 PF00011 Hsp20/alpha crystallin family INQ48_RS34790 PF13817 IS66 C-terminal element INQ48_RS34790 PF13005 zinc-finger binding domain of transposase IS66 INQ48_RS34790 PF03050 Transposase IS66 family INQ48_RS34790 PF13007 Transposase C of IS166 homeodomain INQ48_RS34795 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS34800 PF12680 SnoaL-like domain INQ48_RS34800 PF08281 Sigma-70, region 4 INQ48_RS34800 PF04542 Sigma-70 region 2 INQ48_RS34805 PF00999 Sodium/hydrogen exchanger family INQ48_RS34825 PF04303 PrpF protein INQ48_RS34835 PF02803 Thiolase, C-terminal domain INQ48_RS34835 PF00108 Thiolase, N-terminal domain INQ48_RS34840 PF00106 short chain dehydrogenase INQ48_RS34845 PF02515 CoA-transferase family III INQ48_RS34850 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS34855 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS34860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS34860 PF03466 LysR substrate binding domain INQ48_RS34865 PF00005 ABC transporter INQ48_RS34870 PF00005 ABC transporter INQ48_RS34870 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS34880 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS34885 PF13458 Periplasmic binding protein INQ48_RS34890 PF00857 Isochorismatase family INQ48_RS34910 PF00355 Rieske [2Fe-2S] domain INQ48_RS34910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS34915 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS34915 PF14759 Reductase C-terminal INQ48_RS34920 PF00355 Rieske [2Fe-2S] domain INQ48_RS34925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS34925 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS34930 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS34930 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS34935 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS34935 PF01799 [2Fe-2S] binding domain INQ48_RS34940 PF00561 alpha/beta hydrolase fold INQ48_RS34950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS34950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS34950 PF12806 Acetyl-CoA dehydrogenase C-terminal like INQ48_RS34950 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS34960 PF01266 FAD dependent oxidoreductase INQ48_RS34965 PF07969 Amidohydrolase family INQ48_RS34970 PF01965 DJ-1/PfpI family INQ48_RS34975 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS34980 PF00005 ABC transporter INQ48_RS34985 PF00005 ABC transporter INQ48_RS34985 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS34995 PF01965 DJ-1/PfpI family INQ48_RS35005 PF00330 Aconitase family (aconitate hydratase) INQ48_RS35010 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS35015 PF03466 LysR substrate binding domain INQ48_RS35015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS35035 PF03466 LysR substrate binding domain INQ48_RS35035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS35070 PF09587 Bacterial capsule synthesis protein PGA_cap INQ48_RS35075 PF00694 Aconitase C-terminal domain INQ48_RS35080 PF00330 Aconitase family (aconitate hydratase) INQ48_RS35085 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS35085 PF00501 AMP-binding enzyme INQ48_RS35100 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS35110 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS35120 PF07702 UTRA domain INQ48_RS35120 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS35130 PF00743 Flavin-binding monooxygenase-like INQ48_RS35135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS35135 PF00005 ABC transporter INQ48_RS35140 PF00005 ABC transporter INQ48_RS35140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS35145 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS35150 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS35175 PF00202 Aminotransferase class-III INQ48_RS35200 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS35210 PF00005 ABC transporter INQ48_RS35220 PF00857 Isochorismatase family INQ48_RS35225 PF01425 Amidase INQ48_RS35230 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS35230 PF17938 Tetracyclin repressor-like, C-terminal domain INQ48_RS35240 PF01355 High potential iron-sulfur protein INQ48_RS35255 PF06314 Acetoacetate decarboxylase (ADC) INQ48_RS35280 PF00005 ABC transporter INQ48_RS35285 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35290 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35300 PF00561 alpha/beta hydrolase fold INQ48_RS35310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS35310 PF00034 Cytochrome c INQ48_RS35310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS35320 PF00561 alpha/beta hydrolase fold INQ48_RS35335 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS35350 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS35355 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS35360 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS35390 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS35410 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35415 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35420 PF00106 short chain dehydrogenase INQ48_RS35430 PF04542 Sigma-70 region 2 INQ48_RS35430 PF12680 SnoaL-like domain INQ48_RS35430 PF08281 Sigma-70, region 4 INQ48_RS35435 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS35445 PF09335 SNARE associated Golgi protein INQ48_RS35450 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35455 PF17874 MalT-like TPR region INQ48_RS35455 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35470 PF13091 PLD-like domain INQ48_RS35475 PF09411 Lipid A 3-O-deacylase (PagL) INQ48_RS35495 PF03050 Transposase IS66 family INQ48_RS35495 PF13817 IS66 C-terminal element INQ48_RS35495 PF13007 Transposase C of IS166 homeodomain INQ48_RS35495 PF13005 zinc-finger binding domain of transposase IS66 INQ48_RS35505 PF00775 Dioxygenase INQ48_RS35505 PF04444 Catechol dioxygenase N terminus INQ48_RS35510 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS35515 PF06574 FAD synthetase INQ48_RS35515 PF01687 Riboflavin kinase INQ48_RS35520 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal INQ48_RS35520 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal INQ48_RS35525 PF01613 Flavin reductase like domain INQ48_RS35530 PF07690 Major Facilitator Superfamily INQ48_RS35540 PF03466 LysR substrate binding domain INQ48_RS35540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS35545 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS35560 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS35560 PF14759 Reductase C-terminal INQ48_RS35565 PF00355 Rieske [2Fe-2S] domain INQ48_RS35570 PF00355 Rieske [2Fe-2S] domain INQ48_RS35585 PF00005 ABC transporter INQ48_RS35585 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS35590 PF00005 ABC transporter INQ48_RS35595 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS35725 PF04851 Type III restriction enzyme, res subunit INQ48_RS35725 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) INQ48_RS35725 PF00271 Helicase conserved C-terminal domain INQ48_RS35725 PF08463 EcoEI R protein C-terminal INQ48_RS35740 PF03472 Autoinducer binding domain INQ48_RS35740 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS35795 PF12464 Maltose acetyltransferase INQ48_RS35795 PF14602 Hexapeptide repeat of succinyl-transferase INQ48_RS35800 PF05658 Head domain of trimeric autotransporter adhesin INQ48_RS35800 PF03895 YadA-like membrane anchor domain INQ48_RS35800 PF05662 Coiled stalk of trimeric autotransporter adhesin INQ48_RS35805 PF07506 RepB plasmid partitioning protein INQ48_RS35805 PF02195 ParB-like nuclease domain INQ48_RS35810 PF13614 AAA domain INQ48_RS35830 PF02082 Transcriptional regulator INQ48_RS35855 PF02245 Methylpurine-DNA glycosylase (MPG) INQ48_RS35870 PF00072 Response regulator receiver domain INQ48_RS35870 PF13188 PAS domain INQ48_RS35870 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS35870 PF08448 PAS fold INQ48_RS35870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS35885 PF00474 Sodium:solute symporter family INQ48_RS35890 PF00795 Carbon-nitrogen hydrolase INQ48_RS35905 PF02534 Type IV secretory system Conjugative DNA transfer INQ48_RS35910 PF00437 Type II/IV secretion system protein INQ48_RS35915 PF03743 Bacterial conjugation TrbI-like protein INQ48_RS35930 PF04610 TrbL/VirB6 plasmid conjugal transfer protein INQ48_RS35935 PF07996 Type IV secretion system proteins INQ48_RS35940 PF03135 CagE, TrbE, VirB family, component of type IV transporter system INQ48_RS35960 PF13614 AAA domain INQ48_RS35965 PF02195 ParB-like nuclease domain INQ48_RS35965 PF17762 HTH domain found in ParB protein INQ48_RS35990 PF00561 alpha/beta hydrolase fold INQ48_RS36015 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS36040 PF00072 Response regulator receiver domain INQ48_RS36040 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS36045 PF00582 Universal stress protein family INQ48_RS36050 PF00403 Heavy-metal-associated domain INQ48_RS36060 PF00115 Cytochrome C and Quinol oxidase polypeptide I INQ48_RS36075 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP INQ48_RS36075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS36080 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase INQ48_RS36080 PF12801 4Fe-4S binding domain INQ48_RS36080 PF13746 4Fe-4S dicluster domain INQ48_RS36095 PF06969 HemN C-terminal domain INQ48_RS36095 PF04055 Radical SAM superfamily INQ48_RS36115 PF06100 MCRA family INQ48_RS36125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain INQ48_RS36125 PF00753 Metallo-beta-lactamase superfamily INQ48_RS36125 PF10996 Beta-Casp domain INQ48_RS36130 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS36145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain INQ48_RS36145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain INQ48_RS36150 PF00027 Cyclic nucleotide-binding domain INQ48_RS36150 PF13545 Crp-like helix-turn-helix domain INQ48_RS36155 PF00072 Response regulator receiver domain INQ48_RS36155 PF13426 PAS domain INQ48_RS36155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS36160 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS36160 PF00072 Response regulator receiver domain INQ48_RS36165 PF09364 XFP N-terminal domain INQ48_RS36165 PF09363 XFP C-terminal domain INQ48_RS36165 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase INQ48_RS36180 PF00072 Response regulator receiver domain INQ48_RS36180 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS36200 PF00582 Universal stress protein family INQ48_RS36210 PF00582 Universal stress protein family INQ48_RS36245 PF00107 Zinc-binding dehydrogenase INQ48_RS36245 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS36280 PF06055 Exopolysaccharide synthesis, ExoD INQ48_RS36285 PF00690 Cation transporter/ATPase, N-terminus INQ48_RS36285 PF00689 Cation transporting ATPase, C-terminus INQ48_RS36295 PF00582 Universal stress protein family INQ48_RS36305 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus INQ48_RS36320 PF13180 PDZ domain INQ48_RS36330 PF00582 Universal stress protein family INQ48_RS36335 PF17820 PDZ domain INQ48_RS36335 PF13180 PDZ domain INQ48_RS36360 PF00501 AMP-binding enzyme INQ48_RS36380 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS36380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS36380 PF08521 Two-component sensor kinase N-terminal INQ48_RS36385 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS36385 PF00072 Response regulator receiver domain INQ48_RS36410 PF09957 Bacterial antitoxin of type II TA system, VapB INQ48_RS36415 PF01850 PIN domain INQ48_RS36425 PF03466 LysR substrate binding domain INQ48_RS36425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS36430 PF00248 Aldo/keto reductase family INQ48_RS36435 PF00171 Aldehyde dehydrogenase family INQ48_RS36440 PF00005 ABC transporter INQ48_RS36445 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS36445 PF00005 ABC transporter INQ48_RS36450 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS36455 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS36455 PF11862 Domain of unknown function (DUF3382) INQ48_RS36475 PF02803 Thiolase, C-terminal domain INQ48_RS36475 PF00108 Thiolase, N-terminal domain INQ48_RS36480 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS36480 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS36485 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS36485 PF01799 [2Fe-2S] binding domain INQ48_RS36490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS36490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS36500 PF02515 CoA-transferase family III INQ48_RS36505 PF05199 GMC oxidoreductase INQ48_RS36505 PF00732 GMC oxidoreductase INQ48_RS36510 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS36515 PF00364 Biotin-requiring enzyme INQ48_RS36515 PF00561 alpha/beta hydrolase fold INQ48_RS36520 PF00107 Zinc-binding dehydrogenase INQ48_RS36520 PF16884 N-terminal domain of oxidoreductase INQ48_RS36525 PF00107 Zinc-binding dehydrogenase INQ48_RS36525 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS36535 PF00005 ABC transporter INQ48_RS36555 PF05853 beta-keto acid cleavage enzyme INQ48_RS36565 PF16859 Tetracyclin repressor-like, C-terminal domain INQ48_RS36565 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS36590 PF00108 Thiolase, N-terminal domain INQ48_RS36590 PF02803 Thiolase, C-terminal domain INQ48_RS36595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain INQ48_RS36595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain INQ48_RS36600 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch INQ48_RS36605 PF02233 NAD(P) transhydrogenase beta subunit INQ48_RS36610 PF00199 Catalase INQ48_RS36615 PF01292 Prokaryotic cytochrome b561 INQ48_RS36625 PF07690 Major Facilitator Superfamily INQ48_RS36635 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS36640 PF00135 Carboxylesterase family INQ48_RS36645 PF00135 Carboxylesterase family INQ48_RS36675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS36675 PF13426 PAS domain INQ48_RS36675 PF00072 Response regulator receiver domain INQ48_RS36685 PF00857 Isochorismatase family INQ48_RS36695 PF18073 Rubredoxin metal binding domain INQ48_RS36700 PF00072 Response regulator receiver domain INQ48_RS36700 PF08769 Sporulation initiation factor Spo0A C terminal INQ48_RS36710 PF12973 ChrR Cupin-like domain INQ48_RS36715 PF04542 Sigma-70 region 2 INQ48_RS36715 PF04545 Sigma-70, region 4 INQ48_RS36720 PF00072 Response regulator receiver domain INQ48_RS36720 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS36725 PF08212 Lipocalin-like domain INQ48_RS36750 PF01515 Phosphate acetyl/butaryl transferase INQ48_RS36755 PF02690 Na+/Pi-cotransporter INQ48_RS36760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS36760 PF03466 LysR substrate binding domain INQ48_RS36765 PF01966 HD domain INQ48_RS36770 PF02652 L-lactate permease INQ48_RS36775 PF13382 Adenine deaminase C-terminal domain INQ48_RS36775 PF01979 Amidohydrolase family INQ48_RS36815 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS36815 PF00989 PAS fold INQ48_RS36815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS36845 PF00155 Aminotransferase class I and II INQ48_RS36850 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS36855 PF00005 ABC transporter INQ48_RS36860 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS36865 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS36870 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS36905 PF00072 Response regulator receiver domain INQ48_RS36905 PF02954 Bacterial regulatory protein, Fis family INQ48_RS36905 PF00158 Sigma-54 interaction domain INQ48_RS36910 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS36910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS36915 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS36930 PF00171 Aldehyde dehydrogenase family INQ48_RS36940 PF08666 SAF domain INQ48_RS36940 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus INQ48_RS36950 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS36955 PF00005 ABC transporter INQ48_RS36960 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS36965 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37000 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS37000 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS37005 PF03466 LysR substrate binding domain INQ48_RS37005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37010 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37020 PF05853 beta-keto acid cleavage enzyme INQ48_RS37045 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS37045 PF00501 AMP-binding enzyme INQ48_RS37050 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS37055 PF01118 Semialdehyde dehydrogenase, NAD binding domain INQ48_RS37055 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation INQ48_RS37060 PF00682 HMGL-like INQ48_RS37060 PF07836 DmpG-like communication domain INQ48_RS37065 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS37065 PF00593 TonB dependent receptor INQ48_RS37075 PF08281 Sigma-70, region 4 INQ48_RS37075 PF04542 Sigma-70 region 2 INQ48_RS37090 PF01425 Amidase INQ48_RS37095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37095 PF03466 LysR substrate binding domain INQ48_RS37115 PF00106 short chain dehydrogenase INQ48_RS37125 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37130 PF00108 Thiolase, N-terminal domain INQ48_RS37130 PF02803 Thiolase, C-terminal domain INQ48_RS37135 PF00501 AMP-binding enzyme INQ48_RS37135 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS37140 PF00106 short chain dehydrogenase INQ48_RS37150 PF03737 Aldolase/RraA INQ48_RS37155 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS37165 PF00484 Carbonic anhydrase INQ48_RS37175 PF01042 Endoribonuclease L-PSP INQ48_RS37180 PF03841 L-seryl-tRNA selenium transferase INQ48_RS37180 PF12390 Selenocysteine synthase N terminal INQ48_RS37185 PF00005 ABC transporter INQ48_RS37190 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system INQ48_RS37200 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS37200 PF07702 UTRA domain INQ48_RS37220 PF04002 RadC-like JAB domain INQ48_RS37230 PF01850 PIN domain INQ48_RS37300 PF03466 LysR substrate binding domain INQ48_RS37300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37305 PF04909 Amidohydrolase INQ48_RS37310 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37315 PF02515 CoA-transferase family III INQ48_RS37320 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS37325 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS37330 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37335 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS37345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS37350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS37355 PF03466 LysR substrate binding domain INQ48_RS37355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37360 PF00202 Aminotransferase class-III INQ48_RS37365 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS37370 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS37370 PF00501 AMP-binding enzyme INQ48_RS37370 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ48_RS37375 PF00005 ABC transporter INQ48_RS37375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS37380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS37380 PF00005 ABC transporter INQ48_RS37385 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37385 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS37390 PF01546 Peptidase family M20/M25/M40 INQ48_RS37390 PF07687 Peptidase dimerisation domain INQ48_RS37395 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS37405 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS37405 PF16859 Tetracyclin repressor-like, C-terminal domain INQ48_RS37410 PF07519 Tannase and feruloyl esterase INQ48_RS37415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37415 PF03466 LysR substrate binding domain INQ48_RS37420 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37425 PF01979 Amidohydrolase family INQ48_RS37430 PF05025 RbsD / FucU transport protein family INQ48_RS37440 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37445 PF00732 GMC oxidoreductase INQ48_RS37445 PF05199 GMC oxidoreductase INQ48_RS37450 PF01979 Amidohydrolase family INQ48_RS37455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain INQ48_RS37455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain INQ48_RS37460 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37465 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37470 PF01547 Bacterial extracellular solute-binding protein INQ48_RS37475 PF03459 TOBE domain INQ48_RS37475 PF00005 ABC transporter INQ48_RS37475 PF17912 MalK OB fold domain INQ48_RS37480 PF01380 SIS domain INQ48_RS37485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS37485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain INQ48_RS37490 PF01418 Helix-turn-helix domain, rpiR family INQ48_RS37490 PF01380 SIS domain INQ48_RS37500 PF03473 MOSC domain INQ48_RS37500 PF03475 3-alpha domain INQ48_RS37505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain INQ48_RS37505 PF00117 Glutamine amidotransferase class-I INQ48_RS37510 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS37520 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37525 PF01381 Helix-turn-helix INQ48_RS37525 PF08671 Anti-repressor SinI INQ48_RS37530 PF13439 Glycosyltransferase Family 4 INQ48_RS37530 PF00534 Glycosyl transferases group 1 INQ48_RS37535 PF12852 Cupin INQ48_RS37535 PF12833 Helix-turn-helix domain INQ48_RS37600 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS37615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS37615 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS37615 PF07689 KaiB domain INQ48_RS37620 PF12697 Alpha/beta hydrolase family INQ48_RS37625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37625 PF03466 LysR substrate binding domain INQ48_RS37630 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37640 PF00180 Isocitrate/isopropylmalate dehydrogenase INQ48_RS37645 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS37645 PF00107 Zinc-binding dehydrogenase INQ48_RS37655 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system INQ48_RS37660 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS37660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS37660 PF00672 HAMP domain INQ48_RS37665 PF00072 Response regulator receiver domain INQ48_RS37665 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS37680 PF03621 MbtH-like protein INQ48_RS37685 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase INQ48_RS37690 PF00975 Thioesterase domain INQ48_RS37690 PF00550 Phosphopantetheine attachment site INQ48_RS37690 PF00501 AMP-binding enzyme INQ48_RS37690 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS37690 PF00668 Condensation domain INQ48_RS37720 PF13609 Gram-negative porin INQ48_RS37725 PF04199 Putative cyclase INQ48_RS37730 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS37735 PF07690 Major Facilitator Superfamily INQ48_RS37740 PF13458 Periplasmic binding protein INQ48_RS37745 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS37750 PF00005 ABC transporter INQ48_RS37755 PF00005 ABC transporter INQ48_RS37760 PF00561 alpha/beta hydrolase fold INQ48_RS37770 PF01425 Amidase INQ48_RS37785 PF01425 Amidase INQ48_RS37805 PF00561 alpha/beta hydrolase fold INQ48_RS37810 PF00561 alpha/beta hydrolase fold INQ48_RS37815 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain INQ48_RS37815 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain INQ48_RS37815 PF02805 Metal binding domain of Ada INQ48_RS37815 PF12833 Helix-turn-helix domain INQ48_RS37820 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS37820 PF00072 Response regulator receiver domain INQ48_RS37830 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS37830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS37830 PF08448 PAS fold INQ48_RS37830 PF13188 PAS domain INQ48_RS37830 PF00072 Response regulator receiver domain INQ48_RS37835 PF00072 Response regulator receiver domain INQ48_RS37835 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS37840 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37850 PF00190 Cupin INQ48_RS37855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37855 PF03466 LysR substrate binding domain INQ48_RS37860 PF03466 LysR substrate binding domain INQ48_RS37860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37870 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37880 PF01425 Amidase INQ48_RS37885 PF01522 Polysaccharide deacetylase INQ48_RS37900 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37905 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS37910 PF00005 ABC transporter INQ48_RS37910 PF08402 TOBE domain INQ48_RS37915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37915 PF03466 LysR substrate binding domain INQ48_RS37925 PF03466 LysR substrate binding domain INQ48_RS37925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37930 PF03358 NADPH-dependent FMN reductase INQ48_RS37935 PF13409 Glutathione S-transferase, N-terminal domain INQ48_RS37960 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS37965 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS37975 PF01804 Penicillin amidase INQ48_RS37985 PF03466 LysR substrate binding domain INQ48_RS37985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS37990 PF07171 MlrC C-terminus INQ48_RS37990 PF07364 Metallopeptidase family M81 INQ48_RS38000 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38015 PF17761 DUF1016 N-terminal domain INQ48_RS38015 PF06250 YhcG PDDEXK nuclease domain INQ48_RS38020 PF02515 CoA-transferase family III INQ48_RS38025 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38035 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS38040 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38045 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38050 PF03466 LysR substrate binding domain INQ48_RS38055 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38060 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38065 PF02515 CoA-transferase family III INQ48_RS38070 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS38075 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38090 PF00106 short chain dehydrogenase INQ48_RS38095 PF01575 MaoC like domain INQ48_RS38110 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38115 PF02515 CoA-transferase family III INQ48_RS38120 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38125 PF00593 TonB dependent receptor INQ48_RS38125 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS38140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38140 PF03466 LysR substrate binding domain INQ48_RS38150 PF01494 FAD binding domain INQ48_RS38165 PF00005 ABC transporter INQ48_RS38170 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38190 PF00501 AMP-binding enzyme INQ48_RS38190 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS38200 PF04199 Putative cyclase INQ48_RS38210 PF02129 X-Pro dipeptidyl-peptidase (S15 family) INQ48_RS38210 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain INQ48_RS38230 PF13188 PAS domain INQ48_RS38230 PF00072 Response regulator receiver domain INQ48_RS38230 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS38230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS38230 PF08448 PAS fold INQ48_RS38235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38235 PF03466 LysR substrate binding domain INQ48_RS38240 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38250 PF08669 Glycine cleavage T-protein C-terminal barrel domain INQ48_RS38250 PF01571 Aminomethyltransferase folate-binding domain INQ48_RS38250 PF17806 Sarcosine oxidase A3 domain INQ48_RS38250 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS38260 PF01488 Shikimate / quinate 5-dehydrogenase INQ48_RS38260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain INQ48_RS38260 PF08501 Shikimate dehydrogenase substrate binding domain INQ48_RS38265 PF00561 alpha/beta hydrolase fold INQ48_RS38300 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS38300 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS38310 PF01965 DJ-1/PfpI family INQ48_RS38315 PF00106 short chain dehydrogenase INQ48_RS38320 PF13649 Methyltransferase domain INQ48_RS38325 PF00701 Dihydrodipicolinate synthetase family INQ48_RS38335 PF00083 Sugar (and other) transporter INQ48_RS38335 PF08946 Osmosensory transporter coiled coil INQ48_RS38350 PF01425 Amidase INQ48_RS38360 PF13091 PLD-like domain INQ48_RS38360 PF13396 Phospholipase_D-nuclease N-terminal INQ48_RS38365 PF17755 UvrA DNA-binding domain INQ48_RS38370 PF04055 Radical SAM superfamily INQ48_RS38375 PF03466 LysR substrate binding domain INQ48_RS38375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38385 PF08402 TOBE domain INQ48_RS38385 PF00005 ABC transporter INQ48_RS38390 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38395 PF00155 Aminotransferase class I and II INQ48_RS38425 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS38425 PF00155 Aminotransferase class I and II INQ48_RS38430 PF00202 Aminotransferase class-III INQ48_RS38435 PF00171 Aldehyde dehydrogenase family INQ48_RS38450 PF00557 Metallopeptidase family M24 INQ48_RS38455 PF01212 Beta-eliminating lyase INQ48_RS38460 PF01037 Lrp/AsnC ligand binding domain INQ48_RS38465 PF03466 LysR substrate binding domain INQ48_RS38465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38470 PF00248 Aldo/keto reductase family INQ48_RS38475 PF03466 LysR substrate binding domain INQ48_RS38475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38480 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38485 PF13378 Enolase C-terminal domain-like INQ48_RS38490 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS38500 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38515 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38520 PF07690 Major Facilitator Superfamily INQ48_RS38525 PF00920 Dehydratase family INQ48_RS38550 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS38555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS38555 PF13360 PQQ-like domain INQ48_RS38560 PF00171 Aldehyde dehydrogenase family INQ48_RS38590 PF01613 Flavin reductase like domain INQ48_RS38600 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38605 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38610 PF08402 TOBE domain INQ48_RS38610 PF00005 ABC transporter INQ48_RS38615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region INQ48_RS38620 PF07729 FCD domain INQ48_RS38620 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS38625 PF00175 Oxidoreductase NAD-binding domain INQ48_RS38625 PF00970 Oxidoreductase FAD-binding domain INQ48_RS38625 PF00042 Globin INQ48_RS38630 PF00158 Sigma-54 interaction domain INQ48_RS38630 PF02954 Bacterial regulatory protein, Fis family INQ48_RS38635 PF00155 Aminotransferase class I and II INQ48_RS38635 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS38655 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS38655 PF00072 Response regulator receiver domain INQ48_RS38670 PF04115 Ureidoglycolate lyase INQ48_RS38675 PF16363 GDP-mannose 4,6 dehydratase INQ48_RS38680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS38680 PF00005 ABC transporter INQ48_RS38685 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38685 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS38690 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS38700 PF01979 Amidohydrolase family INQ48_RS38700 PF00449 Urease alpha-subunit, N-terminal domain INQ48_RS38710 PF00360 Phytochrome region INQ48_RS38710 PF01590 GAF domain INQ48_RS38710 PF08446 PAS fold INQ48_RS38710 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS38710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS38725 PF00037 4Fe-4S binding domain INQ48_RS38725 PF11953 Domain of unknown function (DUF3470) INQ48_RS38740 PF00069 Protein kinase domain INQ48_RS38740 PF03793 PASTA domain INQ48_RS38745 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS38750 PF12833 Helix-turn-helix domain INQ48_RS38755 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38760 PF00753 Metallo-beta-lactamase superfamily INQ48_RS38770 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS38780 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38785 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38790 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS38800 PF00815 Histidinol dehydrogenase INQ48_RS38805 PF00072 Response regulator receiver domain INQ48_RS38805 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS38805 PF01627 Hpt domain INQ48_RS38805 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS38805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS38810 PF02515 CoA-transferase family III INQ48_RS38815 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS38825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS38825 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS38825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS38830 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS38840 PF03466 LysR substrate binding domain INQ48_RS38840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38845 PF07690 Major Facilitator Superfamily INQ48_RS38860 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS38865 PF00136 DNA polymerase family B INQ48_RS38865 PF03104 DNA polymerase family B, exonuclease domain INQ48_RS38870 PF00155 Aminotransferase class I and II INQ48_RS38870 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS38875 PF00892 EamA-like transporter family INQ48_RS38880 PF13458 Periplasmic binding protein INQ48_RS38885 PF08386 TAP-like protein INQ48_RS38885 PF00561 alpha/beta hydrolase fold INQ48_RS38900 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS38900 PF00072 Response regulator receiver domain INQ48_RS38905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS38905 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS38915 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS38920 PF08402 TOBE domain INQ48_RS38920 PF00005 ABC transporter INQ48_RS38925 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS38925 PF07729 FCD domain INQ48_RS38930 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component INQ48_RS38935 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component INQ48_RS38940 PF03480 Bacterial extracellular solute-binding protein, family 7 INQ48_RS38945 PF03737 Aldolase/RraA INQ48_RS38950 PF00294 pfkB family carbohydrate kinase INQ48_RS38955 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS38965 PF09084 NMT1/THI5 like INQ48_RS38970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38970 PF03466 LysR substrate binding domain INQ48_RS38975 PF00970 Oxidoreductase FAD-binding domain INQ48_RS38975 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS38975 PF00175 Oxidoreductase NAD-binding domain INQ48_RS38985 PF03466 LysR substrate binding domain INQ48_RS38985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS38995 PF03466 LysR substrate binding domain INQ48_RS39000 PF03466 LysR substrate binding domain INQ48_RS39000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS39010 PF02321 Outer membrane efflux protein INQ48_RS39015 PF00873 AcrB/AcrD/AcrF family INQ48_RS39020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS39025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39025 PF03466 LysR substrate binding domain INQ48_RS39030 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS39035 PF00043 Glutathione S-transferase, C-terminal domain INQ48_RS39035 PF02798 Glutathione S-transferase, N-terminal domain INQ48_RS39050 PF03459 TOBE domain INQ48_RS39050 PF17912 MalK OB fold domain INQ48_RS39050 PF00005 ABC transporter INQ48_RS39055 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39060 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39070 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS39075 PF00005 ABC transporter INQ48_RS39080 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39085 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39100 PF03466 LysR substrate binding domain INQ48_RS39110 PF00005 ABC transporter INQ48_RS39115 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39120 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS39125 PF12833 Helix-turn-helix domain INQ48_RS39125 PF01965 DJ-1/PfpI family INQ48_RS39130 PF01965 DJ-1/PfpI family INQ48_RS39130 PF12833 Helix-turn-helix domain INQ48_RS39145 PF01494 FAD binding domain INQ48_RS39155 PF03971 Monomeric isocitrate dehydrogenase INQ48_RS39160 PF00072 Response regulator receiver domain INQ48_RS39160 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS39165 PF07690 Major Facilitator Superfamily INQ48_RS39170 PF17200 Single Cache domain 2 INQ48_RS39170 PF07730 Histidine kinase INQ48_RS39175 PF00890 FAD binding domain INQ48_RS39180 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS39180 PF00107 Zinc-binding dehydrogenase INQ48_RS39185 PF02515 CoA-transferase family III INQ48_RS39190 PF00067 Cytochrome P450 INQ48_RS39200 PF00072 Response regulator receiver domain INQ48_RS39200 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS39205 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS39205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS39210 PF07679 Immunoglobulin I-set domain INQ48_RS39210 PF02927 Cellulase N-terminal ig-like domain INQ48_RS39210 PF02018 Carbohydrate binding domain INQ48_RS39210 PF00759 Glycosyl hydrolase family 9 INQ48_RS39225 PF07331 Tripartite tricarboxylate transporter TctB family INQ48_RS39230 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS39240 PF13458 Periplasmic binding protein INQ48_RS39245 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS39255 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS39255 PF00005 ABC transporter INQ48_RS39260 PF00005 ABC transporter INQ48_RS39265 PF00456 Transketolase, thiamine diphosphate binding domain INQ48_RS39270 PF02779 Transketolase, pyrimidine binding domain INQ48_RS39270 PF02780 Transketolase, C-terminal domain INQ48_RS39275 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS39285 PF00501 AMP-binding enzyme INQ48_RS39285 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS39290 PF00107 Zinc-binding dehydrogenase INQ48_RS39290 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS39295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS39295 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS39295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS39300 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS39300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS39300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS39305 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS39315 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39335 PF06441 Epoxide hydrolase N terminus INQ48_RS39340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family INQ48_RS39355 PF00005 ABC transporter INQ48_RS39355 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS39360 PF00005 ABC transporter INQ48_RS39365 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS39370 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS39370 PF11862 Domain of unknown function (DUF3382) INQ48_RS39375 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS39400 PF00067 Cytochrome P450 INQ48_RS39455 PF07690 Major Facilitator Superfamily INQ48_RS39480 PF08671 Anti-repressor SinI INQ48_RS39480 PF01381 Helix-turn-helix INQ48_RS39485 PF00005 ABC transporter INQ48_RS39495 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39500 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS39505 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS39515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39515 PF03466 LysR substrate binding domain INQ48_RS39525 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39535 PF03527 RHS protein INQ48_RS39535 PF05593 RHS Repeat INQ48_RS39545 PF06715 Gp5 C-terminal repeat (3 copies) INQ48_RS39545 PF04717 Type VI secretion system, phage-baseplate injector INQ48_RS39550 PF01965 DJ-1/PfpI family INQ48_RS39555 PF12823 Domain of unknown function (DUF3817) INQ48_RS39565 PF00857 Isochorismatase family INQ48_RS39570 PF12833 Helix-turn-helix domain INQ48_RS39570 PF14525 AraC-binding-like domain INQ48_RS39605 PF00067 Cytochrome P450 INQ48_RS39615 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS39620 PF11862 Domain of unknown function (DUF3382) INQ48_RS39620 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS39625 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS39625 PF00005 ABC transporter INQ48_RS39630 PF00005 ABC transporter INQ48_RS39635 PF00171 Aldehyde dehydrogenase family INQ48_RS39640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39640 PF03466 LysR substrate binding domain INQ48_RS39645 PF05973 Phage derived protein Gp49-like (DUF891) INQ48_RS39655 PF01909 Nucleotidyltransferase domain INQ48_RS39655 PF13427 Domain of unknown function (DUF4111) INQ48_RS39685 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS39695 PF07690 Major Facilitator Superfamily INQ48_RS39700 PF01925 Sulfite exporter TauE/SafE INQ48_RS39705 PF01979 Amidohydrolase family INQ48_RS39725 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39730 PF01494 FAD binding domain INQ48_RS39750 PF03358 NADPH-dependent FMN reductase INQ48_RS39760 PF13460 NAD(P)H-binding INQ48_RS39770 PF07690 Major Facilitator Superfamily INQ48_RS39780 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS39785 PF00107 Zinc-binding dehydrogenase INQ48_RS39785 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS39815 PF00583 Acetyltransferase (GNAT) family INQ48_RS39850 PF03466 LysR substrate binding domain INQ48_RS39850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39870 PF07690 Major Facilitator Superfamily INQ48_RS39880 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS39880 PF00501 AMP-binding enzyme INQ48_RS39890 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39895 PF03466 LysR substrate binding domain INQ48_RS39935 PF01850 PIN domain INQ48_RS39950 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39960 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS39965 PF03328 HpcH/HpaI aldolase/citrate lyase family INQ48_RS39970 PF02515 CoA-transferase family III INQ48_RS39980 PF00857 Isochorismatase family INQ48_RS39985 PF05199 GMC oxidoreductase INQ48_RS39985 PF00732 GMC oxidoreductase INQ48_RS39990 PF07859 alpha/beta hydrolase fold INQ48_RS39995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS39995 PF03466 LysR substrate binding domain INQ48_RS40010 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40025 PF07992 Pyridine nucleotide-disulphide oxidoreductase INQ48_RS40025 PF14759 Reductase C-terminal INQ48_RS40055 PF13417 Glutathione S-transferase, N-terminal domain INQ48_RS40060 PF00107 Zinc-binding dehydrogenase INQ48_RS40060 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS40075 PF00005 ABC transporter INQ48_RS40075 PF08402 TOBE domain INQ48_RS40080 PF02515 CoA-transferase family III INQ48_RS40085 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS40095 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS40095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS40095 PF00989 PAS fold INQ48_RS40095 PF00072 Response regulator receiver domain INQ48_RS40095 PF01627 Hpt domain INQ48_RS40095 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS40100 PF02694 Uncharacterised BCR, YnfA/UPF0060 family INQ48_RS40105 PF00793 DAHP synthetase I family INQ48_RS40115 PF00793 DAHP synthetase I family INQ48_RS40120 PF02525 Flavodoxin-like fold INQ48_RS40135 PF18364 Molybdopterin oxidoreductase N-terminal domain INQ48_RS40135 PF00384 Molybdopterin oxidoreductase INQ48_RS40135 PF01568 Molydopterin dinucleotide binding domain INQ48_RS40145 PF00005 ABC transporter INQ48_RS40150 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40165 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40170 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS40170 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS40175 PF00005 ABC transporter INQ48_RS40180 PF09084 NMT1/THI5 like INQ48_RS40185 PF03180 NLPA lipoprotein INQ48_RS40190 PF09383 NIL domain INQ48_RS40190 PF00005 ABC transporter INQ48_RS40195 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS40200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS40210 PF00005 ABC transporter INQ48_RS40215 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40220 PF07969 Amidohydrolase family INQ48_RS40225 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS40230 PF00005 ABC transporter INQ48_RS40245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40245 PF03466 LysR substrate binding domain INQ48_RS40255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS40255 PF08028 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS40255 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS40260 PF03358 NADPH-dependent FMN reductase INQ48_RS40270 PF00296 Luciferase-like monooxygenase INQ48_RS40275 PF00296 Luciferase-like monooxygenase INQ48_RS40280 PF00296 Luciferase-like monooxygenase INQ48_RS40295 PF01042 Endoribonuclease L-PSP INQ48_RS40300 PF04542 Sigma-70 region 2 INQ48_RS40300 PF08281 Sigma-70, region 4 INQ48_RS40305 PF16220 Domain of unknown function (DUF4880) INQ48_RS40305 PF04773 FecR protein INQ48_RS40310 PF00593 TonB dependent receptor INQ48_RS40310 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS40345 PF00171 Aldehyde dehydrogenase family INQ48_RS40350 PF03466 LysR substrate binding domain INQ48_RS40350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40355 PF12320 Type 5 capsule protein repressor C-terminal domain INQ48_RS40355 PF00149 Calcineurin-like phosphoesterase INQ48_RS40370 PF00893 Small Multidrug Resistance protein INQ48_RS40375 PF02627 Carboxymuconolactone decarboxylase family INQ48_RS40380 PF00155 Aminotransferase class I and II INQ48_RS40380 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS40385 PF02525 Flavodoxin-like fold INQ48_RS40390 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS40395 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40400 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40410 PF00866 Ring hydroxylating beta subunit INQ48_RS40420 PF00355 Rieske [2Fe-2S] domain INQ48_RS40420 PF00848 Ring hydroxylating alpha subunit (catalytic domain) INQ48_RS40425 PF00175 Oxidoreductase NAD-binding domain INQ48_RS40425 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS40425 PF00970 Oxidoreductase FAD-binding domain INQ48_RS40430 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40450 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS40450 PF00107 Zinc-binding dehydrogenase INQ48_RS40460 PF01145 SPFH domain / Band 7 family INQ48_RS40460 PF15975 Flotillin INQ48_RS40465 PF09370 Phosphoenolpyruvate hydrolase-like INQ48_RS40475 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS40475 PF00005 ABC transporter INQ48_RS40490 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS40495 PF01979 Amidohydrolase family INQ48_RS40505 PF12697 Alpha/beta hydrolase family INQ48_RS40510 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS40515 PF07859 alpha/beta hydrolase fold INQ48_RS40520 PF07859 alpha/beta hydrolase fold INQ48_RS40530 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS40530 PF00107 Zinc-binding dehydrogenase INQ48_RS40535 PF00171 Aldehyde dehydrogenase family INQ48_RS40550 PF03466 LysR substrate binding domain INQ48_RS40550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40555 PF13460 NAD(P)H-binding INQ48_RS40565 PF00857 Isochorismatase family INQ48_RS40570 PF03466 LysR substrate binding domain INQ48_RS40570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40590 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40600 PF00698 Acyl transferase domain INQ48_RS40600 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS40600 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS40600 PF00107 Zinc-binding dehydrogenase INQ48_RS40600 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS40600 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS40600 PF00550 Phosphopantetheine attachment site INQ48_RS40600 PF14765 Polyketide synthase dehydratase INQ48_RS40600 PF08659 KR domain INQ48_RS40605 PF02515 CoA-transferase family III INQ48_RS40610 PF01575 MaoC like domain INQ48_RS40615 PF02803 Thiolase, C-terminal domain INQ48_RS40615 PF00108 Thiolase, N-terminal domain INQ48_RS40625 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS40630 PF00106 short chain dehydrogenase INQ48_RS40640 PF13458 Periplasmic binding protein INQ48_RS40645 PF00005 ABC transporter INQ48_RS40645 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS40650 PF00005 ABC transporter INQ48_RS40655 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS40660 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS40660 PF11862 Domain of unknown function (DUF3382) INQ48_RS40665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS40665 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS40665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS40675 PF00501 AMP-binding enzyme INQ48_RS40675 PF14535 AMP-binding enzyme C-terminal domain INQ48_RS40680 PF02515 CoA-transferase family III INQ48_RS40690 PF02515 CoA-transferase family III INQ48_RS40695 PF03466 LysR substrate binding domain INQ48_RS40695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40700 PF00171 Aldehyde dehydrogenase family INQ48_RS40710 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40715 PF00561 alpha/beta hydrolase fold INQ48_RS40720 PF09339 IclR helix-turn-helix domain INQ48_RS40720 PF01614 Bacterial transcriptional regulator INQ48_RS40725 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40730 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS40735 PF13380 CoA binding domain INQ48_RS40735 PF13607 Succinyl-CoA ligase like flavodoxin domain INQ48_RS40750 PF00639 PPIC-type PPIASE domain INQ48_RS40750 PF09312 SurA N-terminal domain INQ48_RS40780 PF12833 Helix-turn-helix domain INQ48_RS40805 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40820 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40825 PF00682 HMGL-like INQ48_RS40830 PF02515 CoA-transferase family III INQ48_RS40835 PF06506 Propionate catabolism activator INQ48_RS40835 PF00158 Sigma-54 interaction domain INQ48_RS40835 PF02954 Bacterial regulatory protein, Fis family INQ48_RS40840 PF01381 Helix-turn-helix INQ48_RS40850 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS40850 PF00593 TonB dependent receptor INQ48_RS40875 PF13632 Glycosyl transferase family group 2 INQ48_RS40875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain INQ48_RS40885 PF02350 UDP-N-acetylglucosamine 2-epimerase INQ48_RS40890 PF00561 alpha/beta hydrolase fold INQ48_RS40900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40900 PF03466 LysR substrate binding domain INQ48_RS40905 PF00106 short chain dehydrogenase INQ48_RS40910 PF00881 Nitroreductase family INQ48_RS40930 PF07660 Secretin and TonB N terminus short domain INQ48_RS40930 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS40930 PF00593 TonB dependent receptor INQ48_RS40935 PF07715 TonB-dependent Receptor Plug Domain INQ48_RS40935 PF00593 TonB dependent receptor INQ48_RS40940 PF04773 FecR protein INQ48_RS40940 PF16220 Domain of unknown function (DUF4880) INQ48_RS40950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion INQ48_RS40955 PF12704 MacB-like periplasmic core domain INQ48_RS40955 PF02687 FtsX-like permease family INQ48_RS40955 PF00005 ABC transporter INQ48_RS40965 PF03466 LysR substrate binding domain INQ48_RS40965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS40970 PF00330 Aconitase family (aconitate hydratase) INQ48_RS40975 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS40980 PF03737 Aldolase/RraA INQ48_RS40985 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS40985 PF00563 EAL domain INQ48_RS40985 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS40990 PF00296 Luciferase-like monooxygenase INQ48_RS40995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS41010 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS41015 PF02515 CoA-transferase family III INQ48_RS41020 PF01425 Amidase INQ48_RS41030 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41030 PF07729 FCD domain INQ48_RS41035 PF03466 LysR substrate binding domain INQ48_RS41035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41045 PF07690 Major Facilitator Superfamily INQ48_RS41050 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS41050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS41050 PF08448 PAS fold INQ48_RS41050 PF13188 PAS domain INQ48_RS41050 PF00072 Response regulator receiver domain INQ48_RS41055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41055 PF03466 LysR substrate binding domain INQ48_RS41060 PF07690 Major Facilitator Superfamily INQ48_RS41065 PF00563 EAL domain INQ48_RS41065 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS41065 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS41080 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41085 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41090 PF00005 ABC transporter INQ48_RS41110 PF00857 Isochorismatase family INQ48_RS41120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41120 PF03466 LysR substrate binding domain INQ48_RS41135 PF01475 Ferric uptake regulator family INQ48_RS41155 PF12951 Passenger-associated-transport-repeat INQ48_RS41160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41160 PF03466 LysR substrate binding domain INQ48_RS41165 PF00171 Aldehyde dehydrogenase family INQ48_RS41170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase INQ48_RS41170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase INQ48_RS41180 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS41180 PF00005 ABC transporter INQ48_RS41185 PF00005 ABC transporter INQ48_RS41185 PF09383 NIL domain INQ48_RS41190 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS41210 PF14579 Helix-hairpin-helix motif INQ48_RS41210 PF01336 OB-fold nucleic acid binding domain INQ48_RS41210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ48_RS41210 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ48_RS41210 PF02811 PHP domain INQ48_RS41215 PF03466 LysR substrate binding domain INQ48_RS41215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41220 PF07690 Major Facilitator Superfamily INQ48_RS41220 PF00083 Sugar (and other) transporter INQ48_RS41225 PF01522 Polysaccharide deacetylase INQ48_RS41235 PF02515 CoA-transferase family III INQ48_RS41240 PF00890 FAD binding domain INQ48_RS41255 PF02515 CoA-transferase family III INQ48_RS41260 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41265 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41265 PF07729 FCD domain INQ48_RS41270 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS41270 PF00970 Oxidoreductase FAD-binding domain INQ48_RS41275 PF00355 Rieske [2Fe-2S] domain INQ48_RS41285 PF05977 Transmembrane secretion effector INQ48_RS41290 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41295 PF07729 FCD domain INQ48_RS41295 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS41300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS41300 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS41305 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41305 PF07729 FCD domain INQ48_RS41310 PF01144 Coenzyme A transferase INQ48_RS41315 PF01144 Coenzyme A transferase INQ48_RS41320 PF02515 CoA-transferase family III INQ48_RS41325 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41345 PF00501 AMP-binding enzyme INQ48_RS41345 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS41360 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS41365 PF01575 MaoC like domain INQ48_RS41380 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS41380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS41380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS41385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS41385 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS41385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS41400 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS41400 PF00501 AMP-binding enzyme INQ48_RS41405 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS41410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS41410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS41410 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS41415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS41415 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS41415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS41420 PF00356 Bacterial regulatory proteins, lacI family INQ48_RS41425 PF00501 AMP-binding enzyme INQ48_RS41425 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS41430 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41445 PF00171 Aldehyde dehydrogenase family INQ48_RS41450 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41455 PF05199 GMC oxidoreductase INQ48_RS41455 PF00732 GMC oxidoreductase INQ48_RS41460 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41485 PF07729 FCD domain INQ48_RS41485 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41490 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41495 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS41500 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41505 PF07883 Cupin domain INQ48_RS41515 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41520 PF00106 short chain dehydrogenase INQ48_RS41525 PF13458 Periplasmic binding protein INQ48_RS41530 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS41535 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS41535 PF00005 ABC transporter INQ48_RS41540 PF00005 ABC transporter INQ48_RS41555 PF04303 PrpF protein INQ48_RS41570 PF01134 Glucose inhibited division protein A INQ48_RS41570 PF13932 GidA associated domain INQ48_RS41575 PF01494 FAD binding domain INQ48_RS41580 PF14537 Cytochrome c3 INQ48_RS41580 PF00890 FAD binding domain INQ48_RS41600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41600 PF03466 LysR substrate binding domain INQ48_RS41605 PF00270 DEAD/DEAH box helicase INQ48_RS41605 PF08494 DEAD/H associated INQ48_RS41605 PF00271 Helicase conserved C-terminal domain INQ48_RS41610 PF02308 MgtC family INQ48_RS41615 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS41615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS41615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS41635 PF01965 DJ-1/PfpI family INQ48_RS41635 PF12833 Helix-turn-helix domain INQ48_RS41680 PF00384 Molybdopterin oxidoreductase INQ48_RS41705 PF00171 Aldehyde dehydrogenase family INQ48_RS41710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS41710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS41720 PF03466 LysR substrate binding domain INQ48_RS41720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41725 PF02626 Carboxyltransferase domain, subdomain A and B INQ48_RS41735 PF03746 LamB/YcsF family INQ48_RS41755 PF02525 Flavodoxin-like fold INQ48_RS41765 PF07702 UTRA domain INQ48_RS41765 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41770 PF00005 ABC transporter INQ48_RS41775 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41780 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS41785 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS41795 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS41795 PF07729 FCD domain INQ48_RS41800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41800 PF03466 LysR substrate binding domain INQ48_RS41805 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS41810 PF00005 ABC transporter INQ48_RS41815 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41820 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41825 PF00795 Carbon-nitrogen hydrolase INQ48_RS41830 PF01979 Amidohydrolase family INQ48_RS41835 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS41840 PF01177 Asp/Glu/Hydantoin racemase INQ48_RS41845 PF02634 FdhD/NarQ family INQ48_RS41850 PF12838 4Fe-4S dicluster domain INQ48_RS41850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS41850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region INQ48_RS41850 PF00384 Molybdopterin oxidoreductase INQ48_RS41850 PF01568 Molydopterin dinucleotide binding domain INQ48_RS41855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit INQ48_RS41855 PF10531 SLBB domain INQ48_RS41855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region INQ48_RS41885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain INQ48_RS41885 PF00384 Molybdopterin oxidoreductase INQ48_RS41885 PF01568 Molydopterin dinucleotide binding domain INQ48_RS41890 PF13247 4Fe-4S dicluster domain INQ48_RS41910 PF00994 Probable molybdopterin binding domain INQ48_RS41910 PF03453 MoeA N-terminal region (domain I and II) INQ48_RS41910 PF03454 MoeA C-terminal region (domain IV) INQ48_RS41915 PF00994 Probable molybdopterin binding domain INQ48_RS41915 PF03454 MoeA C-terminal region (domain IV) INQ48_RS41915 PF03453 MoeA N-terminal region (domain I and II) INQ48_RS41920 PF12849 PBP superfamily domain INQ48_RS41925 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS41930 PF00005 ABC transporter INQ48_RS41930 PF00664 ABC transporter transmembrane region INQ48_RS41935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS41935 PF03466 LysR substrate binding domain INQ48_RS41945 PF02321 Outer membrane efflux protein INQ48_RS41950 PF00873 AcrB/AcrD/AcrF family INQ48_RS41960 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS41960 PF00072 Response regulator receiver domain INQ48_RS41965 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS41965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS41965 PF00672 HAMP domain INQ48_RS41980 PF02669 K+-transporting ATPase, c chain INQ48_RS41990 PF03814 Potassium-transporting ATPase A subunit INQ48_RS42000 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS42000 PF00155 Aminotransferase class I and II INQ48_RS42005 PF00155 Aminotransferase class I and II INQ48_RS42010 PF02567 Phenazine biosynthesis-like protein INQ48_RS42015 PF00419 Fimbrial protein INQ48_RS42020 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain INQ48_RS42020 PF02753 Pili assembly chaperone PapD, C-terminal domain INQ48_RS42025 PF13953 PapC C-terminal domain INQ48_RS42025 PF13954 PapC N-terminal domain INQ48_RS42025 PF00577 Outer membrane usher protein INQ48_RS42035 PF00072 Response regulator receiver domain INQ48_RS42035 PF00486 Transcriptional regulatory protein, C terminal INQ48_RS42045 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42045 PF00501 AMP-binding enzyme INQ48_RS42050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain INQ48_RS42050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain INQ48_RS42055 PF01627 Hpt domain INQ48_RS42055 PF00072 Response regulator receiver domain INQ48_RS42055 PF00512 His Kinase A (phospho-acceptor) domain INQ48_RS42055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase INQ48_RS42055 PF17149 Periplasmic sensor domain found in signal transduction proteins INQ48_RS42055 PF00672 HAMP domain INQ48_RS42060 PF01979 Amidohydrolase family INQ48_RS42065 PF08386 TAP-like protein INQ48_RS42065 PF00561 alpha/beta hydrolase fold INQ48_RS42070 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS42080 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS42085 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS42090 PF07519 Tannase and feruloyl esterase INQ48_RS42095 PF01026 TatD related DNase INQ48_RS42115 PF01381 Helix-turn-helix INQ48_RS42115 PF08671 Anti-repressor SinI INQ48_RS42120 PF00596 Class II Aldolase and Adducin N-terminal domain INQ48_RS42125 PF03466 LysR substrate binding domain INQ48_RS42125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS42130 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS42130 PF00107 Zinc-binding dehydrogenase INQ48_RS42135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain INQ48_RS42135 PF00205 Thiamine pyrophosphate enzyme, central domain INQ48_RS42135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain INQ48_RS42140 PF01144 Coenzyme A transferase INQ48_RS42145 PF01144 Coenzyme A transferase INQ48_RS42150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain INQ48_RS42150 PF02770 Acyl-CoA dehydrogenase, middle domain INQ48_RS42150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain INQ48_RS42155 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS42160 PF01053 Cys/Met metabolism PLP-dependent enzyme INQ48_RS42165 PF00005 ABC transporter INQ48_RS42170 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42175 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42180 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS42195 PF00106 short chain dehydrogenase INQ48_RS42215 PF12833 Helix-turn-helix domain INQ48_RS42220 PF12804 MobA-like NTP transferase domain INQ48_RS42230 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS42235 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS42245 PF01494 FAD binding domain INQ48_RS42255 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS42270 PF01381 Helix-turn-helix INQ48_RS42270 PF00717 Peptidase S24-like INQ48_RS42280 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42280 PF00550 Phosphopantetheine attachment site INQ48_RS42280 PF02801 Beta-ketoacyl synthase, C-terminal domain INQ48_RS42280 PF00109 Beta-ketoacyl synthase, N-terminal domain INQ48_RS42280 PF00202 Aminotransferase class-III INQ48_RS42280 PF00501 AMP-binding enzyme INQ48_RS42280 PF00668 Condensation domain INQ48_RS42280 PF16197 Ketoacyl-synthetase C-terminal extension INQ48_RS42285 PF00501 AMP-binding enzyme INQ48_RS42285 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42285 PF00668 Condensation domain INQ48_RS42285 PF00550 Phosphopantetheine attachment site INQ48_RS42285 PF00975 Thioesterase domain INQ48_RS42305 PF10531 SLBB domain INQ48_RS42305 PF02563 Polysaccharide biosynthesis/export protein INQ48_RS42310 PF13614 AAA domain INQ48_RS42310 PF13807 G-rich domain on putative tyrosine kinase INQ48_RS42310 PF02706 Chain length determinant protein INQ48_RS42315 PF02397 Bacterial sugar transferase INQ48_RS42320 PF01370 NAD dependent epimerase/dehydratase family INQ48_RS42350 PF13579 Glycosyl transferase 4-like domain INQ48_RS42350 PF00534 Glycosyl transferases group 1 INQ48_RS42355 PF16363 GDP-mannose 4,6 dehydratase INQ48_RS42360 PF00072 Response regulator receiver domain INQ48_RS42360 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS42365 PF01050 Mannose-6-phosphate isomerase INQ48_RS42365 PF00483 Nucleotidyl transferase INQ48_RS42370 PF16363 GDP-mannose 4,6 dehydratase INQ48_RS42375 PF00196 Bacterial regulatory proteins, luxR family INQ48_RS42375 PF00072 Response regulator receiver domain INQ48_RS42380 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain INQ48_RS42380 PF06165 Glycosyltransferase family 36 INQ48_RS42380 PF10091 Putative glucoamylase INQ48_RS42400 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ48_RS42400 PF00501 AMP-binding enzyme INQ48_RS42400 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42410 PF09423 PhoD-like phosphatase INQ48_RS42410 PF16655 PhoD-like phosphatase, N-terminal domain INQ48_RS42415 PF13609 Gram-negative porin INQ48_RS42425 PF00149 Calcineurin-like phosphoesterase INQ48_RS42430 PF00005 ABC transporter INQ48_RS42430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS42435 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42435 PF12911 N-terminal TM domain of oligopeptide transport permease C INQ48_RS42440 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS42450 PF00171 Aldehyde dehydrogenase family INQ48_RS42455 PF00465 Iron-containing alcohol dehydrogenase INQ48_RS42460 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase INQ48_RS42465 PF01425 Amidase INQ48_RS42470 PF00005 ABC transporter INQ48_RS42470 PF09383 NIL domain INQ48_RS42475 PF00005 ABC transporter INQ48_RS42485 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS42510 PF11612 Type II secretion system (T2SS), protein J INQ48_RS42510 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS42520 PF07963 Prokaryotic N-terminal methylation motif INQ48_RS42520 PF12019 Type II transport protein GspH INQ48_RS42565 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42565 PF00501 AMP-binding enzyme INQ48_RS42570 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS42570 PF00501 AMP-binding enzyme INQ48_RS42585 PF00106 short chain dehydrogenase INQ48_RS42600 PF00202 Aminotransferase class-III INQ48_RS42615 PF05378 Hydantoinase/oxoprolinase N-terminal region INQ48_RS42615 PF01968 Hydantoinase/oxoprolinase INQ48_RS42640 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS42650 PF01970 Tripartite tricarboxylate transporter TctA family INQ48_RS42655 PF00698 Acyl transferase domain INQ48_RS42655 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS42655 PF08659 KR domain INQ48_RS42655 PF00550 Phosphopantetheine attachment site INQ48_RS42655 PF14765 Polyketide synthase dehydratase INQ48_RS42665 PF05368 NmrA-like family INQ48_RS42680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS42680 PF03466 LysR substrate binding domain INQ48_RS42685 PF00753 Metallo-beta-lactamase superfamily INQ48_RS42690 PF02515 CoA-transferase family III INQ48_RS42700 PF00202 Aminotransferase class-III INQ48_RS42705 PF00155 Aminotransferase class I and II INQ48_RS42715 PF13416 Bacterial extracellular solute-binding protein INQ48_RS42720 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42720 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS42725 PF08402 TOBE domain INQ48_RS42725 PF00005 ABC transporter INQ48_RS42740 PF00266 Aminotransferase class-V INQ48_RS42750 PF07063 Domain of unknown function (DUF1338) INQ48_RS42755 PF01565 FAD binding domain INQ48_RS42760 PF00155 Aminotransferase class I and II INQ48_RS42765 PF13416 Bacterial extracellular solute-binding protein INQ48_RS42770 PF01012 Electron transfer flavoprotein domain INQ48_RS42775 PF01012 Electron transfer flavoprotein domain INQ48_RS42775 PF00766 Electron transfer flavoprotein FAD-binding domain INQ48_RS42800 PF01042 Endoribonuclease L-PSP INQ48_RS42810 PF00144 Beta-lactamase INQ48_RS42830 PF01266 FAD dependent oxidoreductase INQ48_RS42835 PF00144 Beta-lactamase INQ48_RS42840 PF07676 WD40-like Beta Propeller Repeat INQ48_RS42840 PF00326 Prolyl oligopeptidase family INQ48_RS42850 PF00174 Oxidoreductase molybdopterin binding domain INQ48_RS42855 PF01292 Prokaryotic cytochrome b561 INQ48_RS42865 PF17932 Tetracyclin repressor-like, C-terminal domain INQ48_RS42865 PF00440 Bacterial regulatory proteins, tetR family INQ48_RS42875 PF00005 ABC transporter INQ48_RS42880 PF00005 ABC transporter INQ48_RS42880 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS42885 PF11862 Domain of unknown function (DUF3382) INQ48_RS42885 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS42890 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS42895 PF00585 C-terminal regulatory domain of Threonine dehydratase INQ48_RS42895 PF00291 Pyridoxal-phosphate dependent enzyme INQ48_RS42900 PF00795 Carbon-nitrogen hydrolase INQ48_RS42905 PF01614 Bacterial transcriptional regulator INQ48_RS42905 PF09339 IclR helix-turn-helix domain INQ48_RS42925 PF13007 Transposase C of IS166 homeodomain INQ48_RS42925 PF13005 zinc-finger binding domain of transposase IS66 INQ48_RS42925 PF13817 IS66 C-terminal element INQ48_RS42925 PF03050 Transposase IS66 family INQ48_RS42945 PF07969 Amidohydrolase family INQ48_RS42950 PF01418 Helix-turn-helix domain, rpiR family INQ48_RS42950 PF01380 SIS domain INQ48_RS42955 PF12793 Sugar transport-related sRNA regulator N-term INQ48_RS42955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle INQ48_RS42970 PF13458 Periplasmic binding protein INQ48_RS42975 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS42980 PF00005 ABC transporter INQ48_RS42980 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS42985 PF00005 ABC transporter INQ48_RS42990 PF00171 Aldehyde dehydrogenase family INQ48_RS43000 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43005 PF08240 Alcohol dehydrogenase GroES-like domain INQ48_RS43005 PF00107 Zinc-binding dehydrogenase INQ48_RS43010 PF13193 AMP-binding enzyme C-terminal domain INQ48_RS43010 PF00501 AMP-binding enzyme INQ48_RS43010 PF16177 Acetyl-coenzyme A synthetase N-terminus INQ48_RS43025 PF13007 Transposase C of IS166 homeodomain INQ48_RS43025 PF13005 zinc-finger binding domain of transposase IS66 INQ48_RS43025 PF13817 IS66 C-terminal element INQ48_RS43025 PF03050 Transposase IS66 family INQ48_RS43040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS43040 PF03466 LysR substrate binding domain INQ48_RS43045 PF08450 SMP-30/Gluconolactonase/LRE-like region INQ48_RS43120 PF02811 PHP domain INQ48_RS43120 PF14579 Helix-hairpin-helix motif INQ48_RS43120 PF07733 Bacterial DNA polymerase III alpha NTPase domain INQ48_RS43120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain INQ48_RS43170 PF13195 Protein of unknown function (DUF4011) INQ48_RS43170 PF13086 AAA domain INQ48_RS43170 PF13087 AAA domain INQ48_RS43170 PF13195 Protein of unknown function (DUF4011) INQ48_RS43170 PF13086 AAA domain INQ48_RS43170 PF13087 AAA domain INQ48_RS43180 PF02646 RmuC family INQ48_RS43200 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43205 PF00378 Enoyl-CoA hydratase/isomerase INQ48_RS43205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain INQ48_RS43205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain INQ48_RS43215 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS43220 PF00034 Cytochrome c INQ48_RS43220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III INQ48_RS43225 PF01799 [2Fe-2S] binding domain INQ48_RS43225 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS43230 PF05853 beta-keto acid cleavage enzyme INQ48_RS43240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS43240 PF03466 LysR substrate binding domain INQ48_RS43245 PF00392 Bacterial regulatory proteins, gntR family INQ48_RS43245 PF07729 FCD domain INQ48_RS43260 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain INQ48_RS43280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain INQ48_RS43285 PF00005 ABC transporter INQ48_RS43290 PF00497 Bacterial extracellular solute-binding proteins, family 3 INQ48_RS43295 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS43300 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS43310 PF00920 Dehydratase family INQ48_RS43360 PF13005 zinc-finger binding domain of transposase IS66 INQ48_RS43360 PF03050 Transposase IS66 family INQ48_RS43360 PF13817 IS66 C-terminal element INQ48_RS43360 PF13007 Transposase C of IS166 homeodomain INQ48_RS43380 PF03466 LysR substrate binding domain INQ48_RS43380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS43385 PF00155 Aminotransferase class I and II INQ48_RS43395 PF03737 Aldolase/RraA INQ48_RS43415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS43415 PF03466 LysR substrate binding domain INQ48_RS43435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase INQ48_RS43435 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain INQ48_RS43440 PF00111 2Fe-2S iron-sulfur cluster binding domain INQ48_RS43440 PF01799 [2Fe-2S] binding domain INQ48_RS43445 PF00941 FAD binding domain in molybdopterin dehydrogenase INQ48_RS43445 PF03450 CO dehydrogenase flavoprotein C-terminal domain INQ48_RS43450 PF12146 Serine aminopeptidase, S33 INQ48_RS43455 PF00005 ABC transporter INQ48_RS43460 PF00005 ABC transporter INQ48_RS43460 PF12399 Branched-chain amino acid ATP-binding cassette transporter INQ48_RS43470 PF02653 Branched-chain amino acid transport system / permease component INQ48_RS43495 PF02371 Transposase IS116/IS110/IS902 family INQ48_RS43495 PF01548 Transposase INQ48_RS43505 PF02371 Transposase IS116/IS110/IS902 family INQ48_RS43505 PF01548 Transposase INQ48_RS43520 PF13614 AAA domain INQ48_RS43555 PF03783 Curli production assembly/transport component CsgG INQ48_RS43575 PF00990 Diguanylate cyclase, GGDEF domain INQ48_RS43575 PF00563 EAL domain INQ48_RS43575 PF03707 Bacterial signalling protein N terminal repeat INQ48_RS43700 PF00226 DnaJ domain INQ48_RS43700 PF00684 DnaJ central domain INQ48_RS43700 PF01556 DnaJ C terminal domain INQ48_RS43725 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43735 PF02668 Taurine catabolism dioxygenase TauD, TfdA family INQ48_RS43750 PF01557 Fumarylacetoacetate (FAA) hydrolase family INQ48_RS43755 PF03401 Tripartite tricarboxylate transporter family receptor INQ48_RS43765 PF03466 LysR substrate binding domain INQ48_RS43765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family INQ48_RS43790 PF00132 Bacterial transferase hexapeptide (six repeats) INQ48_RS43790 PF12804 MobA-like NTP transferase domain INQ48_RS43800 PF00202 Aminotransferase class-III INQ48_RS43825 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS43830 PF00528 Binding-protein-dependent transport system inner membrane component INQ48_RS43835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region INQ48_RS43835 PF00005 ABC transporter INQ48_RS43840 PF00005 ABC transporter INQ48_RS43840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region