locus-tag class description GJQ55_RS00005 PF00308 Bacterial dnaA protein GJQ55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix GJQ55_RS00005 PF11638 DnaA N-terminal domain GJQ55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GJQ55_RS00010 PF02767 DNA polymerase III beta subunit, central domain GJQ55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GJQ55_RS00015 PF02463 RecF/RecN/SMC N terminal domain GJQ55_RS00020 PF01751 Toprim domain GJQ55_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS00020 PF18053 DNA gyrase B subunit insert domain GJQ55_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus GJQ55_RS00020 PF00204 DNA gyrase B GJQ55_RS00040 PF05746 DALR anticodon binding domain GJQ55_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit GJQ55_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit GJQ55_RS00050 PF02028 BCCT, betaine/carnitine/choline family transporter GJQ55_RS00060 PF00072 Response regulator receiver domain GJQ55_RS00065 PF03279 Bacterial lipid A biosynthesis acyltransferase GJQ55_RS00070 PF02080 TrkA-C domain GJQ55_RS00070 PF03471 Transporter associated domain GJQ55_RS00070 PF00999 Sodium/hydrogen exchanger family GJQ55_RS00075 PF00582 Universal stress protein family GJQ55_RS00080 PF01740 STAS domain GJQ55_RS00080 PF00916 Sulfate permease family GJQ55_RS00085 PF02386 Cation transport protein GJQ55_RS00090 PF02080 TrkA-C domain GJQ55_RS00090 PF02254 TrkA-N domain GJQ55_RS00095 PF01029 NusB family GJQ55_RS00095 PF01189 16S rRNA methyltransferase RsmB/F GJQ55_RS00100 PF02911 Formyl transferase, C-terminal domain GJQ55_RS00100 PF00551 Formyl transferase GJQ55_RS00105 PF01327 Polypeptide deformylase GJQ55_RS00115 PF02481 DNA recombination-mediator protein A GJQ55_RS00115 PF17782 DprA winged helix domain GJQ55_RS00120 PF01300 Telomere recombination GJQ55_RS00125 PF01218 Coproporphyrinogen III oxidase GJQ55_RS00130 PF08501 Shikimate dehydrogenase substrate binding domain GJQ55_RS00130 PF01488 Shikimate / quinate 5-dehydrogenase GJQ55_RS00130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GJQ55_RS00155 PF01709 Transcriptional regulator GJQ55_RS00170 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GJQ55_RS00180 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS00185 PF01432 Peptidase family M3 GJQ55_RS00210 PF06039 Malate:quinone oxidoreductase (Mqo) GJQ55_RS00215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GJQ55_RS00215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GJQ55_RS00220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GJQ55_RS00225 PF02233 NAD(P) transhydrogenase beta subunit GJQ55_RS00230 PF04264 YceI-like domain GJQ55_RS00235 PF01292 Prokaryotic cytochrome b561 GJQ55_RS00240 PF03466 LysR substrate binding domain GJQ55_RS00240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS00245 PF02630 SCO1/SenC GJQ55_RS00250 PF00082 Subtilase family GJQ55_RS00250 PF04151 Bacterial pre-peptidase C-terminal domain GJQ55_RS00260 PF01078 Magnesium chelatase, subunit ChlI GJQ55_RS00260 PF13335 Magnesium chelatase, subunit ChlI C-terminal GJQ55_RS00270 PF00580 UvrD/REP helicase N-terminal domain GJQ55_RS00270 PF13361 UvrD-like helicase C-terminal domain GJQ55_RS00280 PF00563 EAL domain GJQ55_RS00280 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS00280 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS00290 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS00290 PF01627 Hpt domain GJQ55_RS00290 PF00072 Response regulator receiver domain GJQ55_RS00290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GJQ55_RS00290 PF00672 HAMP domain GJQ55_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS00295 PF00072 Response regulator receiver domain GJQ55_RS00320 PF01380 SIS domain GJQ55_RS00325 PF08220 DeoR-like helix-turn-helix domain GJQ55_RS00325 PF00455 DeoR C terminal sensor domain GJQ55_RS00330 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS00340 PF13462 Thioredoxin GJQ55_RS00345 PF00034 Cytochrome c GJQ55_RS00350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJQ55_RS00355 PF01926 50S ribosome-binding GTPase GJQ55_RS00360 PF00950 ABC 3 transport family GJQ55_RS00365 PF00005 ABC transporter GJQ55_RS00370 PF01475 Ferric uptake regulator family GJQ55_RS00375 PF01297 Zinc-uptake complex component A periplasmic GJQ55_RS00380 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS00380 PF14602 Hexapeptide repeat of succinyl-transferase GJQ55_RS00380 PF12804 MobA-like NTP transferase domain GJQ55_RS00385 PF04172 LrgB-like family GJQ55_RS00390 PF03788 LrgA family GJQ55_RS00400 PF01594 AI-2E family transporter GJQ55_RS00405 PF00072 Response regulator receiver domain GJQ55_RS00405 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS00410 PF00672 HAMP domain GJQ55_RS00410 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS00410 PF16750 Sensor domain of 2-component histidine kinase GJQ55_RS00415 PF03949 Malic enzyme, NAD binding domain GJQ55_RS00415 PF00390 Malic enzyme, N-terminal domain GJQ55_RS00425 PF00679 Elongation factor G C-terminus GJQ55_RS00425 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS00425 PF03144 Elongation factor Tu domain 2 GJQ55_RS00430 PF00120 Glutamine synthetase, catalytic domain GJQ55_RS00430 PF03951 Glutamine synthetase, beta-Grasp domain GJQ55_RS00445 PF01812 5-formyltetrahydrofolate cyclo-ligase family GJQ55_RS00455 PF05164 Cell division protein ZapA GJQ55_RS00470 PF05195 Aminopeptidase P, N-terminal domain GJQ55_RS00470 PF00557 Metallopeptidase family M24 GJQ55_RS00475 PF01494 FAD binding domain GJQ55_RS00480 PF01494 FAD binding domain GJQ55_RS00485 PF03061 Thioesterase superfamily GJQ55_RS00490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GJQ55_RS00505 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS00515 PF00005 ABC transporter GJQ55_RS00520 PF01895 PhoU domain GJQ55_RS00525 PF00267 Gram-negative porin GJQ55_RS00530 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS00530 PF11808 Phosphate regulon sensor protein PhoR GJQ55_RS00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS00530 PF00989 PAS fold GJQ55_RS00535 PF00072 Response regulator receiver domain GJQ55_RS00535 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS00555 PF12105 SpoU, rRNA methylase, C-terminal GJQ55_RS00555 PF00588 SpoU rRNA Methylase family GJQ55_RS00565 PF00072 Response regulator receiver domain GJQ55_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS00570 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS00570 PF00989 PAS fold GJQ55_RS00570 PF11808 Phosphate regulon sensor protein PhoR GJQ55_RS00575 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS00575 PF00072 Response regulator receiver domain GJQ55_RS00580 PF01040 UbiA prenyltransferase family GJQ55_RS00585 PF04345 Chorismate lyase GJQ55_RS00590 PF00301 Rubredoxin GJQ55_RS00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS00595 PF18113 Rubredoxin binding C-terminal domain GJQ55_RS00600 PF00216 Bacterial DNA-binding protein GJQ55_RS00615 PF00375 Sodium:dicarboxylate symporter family GJQ55_RS00625 PF07497 Rho termination factor, RNA-binding domain GJQ55_RS00625 PF07498 Rho termination factor, N-terminal domain GJQ55_RS00625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJQ55_RS00630 PF00085 Thioredoxin GJQ55_RS00635 PF02541 Ppx/GppA phosphatase family GJQ55_RS00640 PF07732 Multicopper oxidase GJQ55_RS00640 PF07731 Multicopper oxidase GJQ55_RS00640 PF00394 Multicopper oxidase GJQ55_RS00650 PF02503 Polyphosphate kinase middle domain GJQ55_RS00650 PF13090 Polyphosphate kinase C-terminal domain 2 GJQ55_RS00650 PF17941 Polyphosphate kinase C-terminal domain 1 GJQ55_RS00650 PF13089 Polyphosphate kinase N-terminal domain GJQ55_RS00655 PF00490 Delta-aminolevulinic acid dehydratase GJQ55_RS00660 PF03061 Thioesterase superfamily GJQ55_RS00670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GJQ55_RS00675 PF00291 Pyridoxal-phosphate dependent enzyme GJQ55_RS00675 PF00585 C-terminal regulatory domain of Threonine dehydratase GJQ55_RS00680 PF01553 Acyltransferase GJQ55_RS00685 PF01713 Smr domain GJQ55_RS00700 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS00700 PF00501 AMP-binding enzyme GJQ55_RS00710 PF00561 alpha/beta hydrolase fold GJQ55_RS00715 PF07021 Methionine biosynthesis protein MetW GJQ55_RS00715 PF00561 alpha/beta hydrolase fold GJQ55_RS00725 PF01725 Ham1 family GJQ55_RS00730 PF06969 HemN C-terminal domain GJQ55_RS00730 PF04055 Radical SAM superfamily GJQ55_RS00740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GJQ55_RS00750 PF00696 Amino acid kinase family GJQ55_RS00750 PF13840 ACT domain GJQ55_RS00755 PF06339 Ectoine synthase GJQ55_RS00760 PF00202 Aminotransferase class-III GJQ55_RS00765 PF00583 Acetyltransferase (GNAT) family GJQ55_RS00775 PF00108 Thiolase, N-terminal domain GJQ55_RS00775 PF02803 Thiolase, C-terminal domain GJQ55_RS00780 PF00902 Sec-independent protein translocase protein (TatC) GJQ55_RS00785 PF02416 mttA/Hcf106 family GJQ55_RS00790 PF02416 mttA/Hcf106 family GJQ55_RS00795 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GJQ55_RS00800 PF01502 Phosphoribosyl-AMP cyclohydrolase GJQ55_RS00805 PF03109 ABC1 family GJQ55_RS00815 PF01209 ubiE/COQ5 methyltransferase family GJQ55_RS00830 PF01738 Dienelactone hydrolase family GJQ55_RS00835 PF01740 STAS domain GJQ55_RS00835 PF00916 Sulfate permease family GJQ55_RS00840 PF02594 Uncharacterised ACR, YggU family COG1872 GJQ55_RS00845 PF02325 YGGT family GJQ55_RS00850 PF03807 NADP oxidoreductase coenzyme F420-dependent GJQ55_RS00850 PF14748 Pyrroline-5-carboxylate reductase dimerisation GJQ55_RS00855 PF01168 Alanine racemase, N-terminal domain GJQ55_RS00860 PF00437 Type II/IV secretion system protein GJQ55_RS00865 PF00437 Type II/IV secretion system protein GJQ55_RS00870 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS00870 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS00870 PF00563 EAL domain GJQ55_RS00875 PF04231 Endonuclease I GJQ55_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS00885 PF13533 Biotin-lipoyl like GJQ55_RS00890 PF00005 ABC transporter GJQ55_RS00900 PF12801 4Fe-4S binding domain GJQ55_RS00900 PF04205 FMN-binding domain GJQ55_RS00905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GJQ55_RS00905 PF18764 Nitrous oxide reductase propeller repeat GJQ55_RS00905 PF18793 Nitrous oxide reductase propeller repeat 2 GJQ55_RS00910 PF05048 Periplasmic copper-binding protein (NosD) GJQ55_RS00915 PF00005 ABC transporter GJQ55_RS00920 PF12679 ABC-2 family transporter protein GJQ55_RS00925 PF05573 NosL GJQ55_RS00930 PF02416 mttA/Hcf106 family GJQ55_RS00940 PF00171 Aldehyde dehydrogenase family GJQ55_RS00950 PF08240 Alcohol dehydrogenase GroES-like domain GJQ55_RS00950 PF00107 Zinc-binding dehydrogenase GJQ55_RS00970 PF02690 Na+/Pi-cotransporter GJQ55_RS00975 PF00294 pfkB family carbohydrate kinase GJQ55_RS00980 PF02237 Biotin protein ligase C terminal domain GJQ55_RS00980 PF03099 Biotin/lipoate A/B protein ligase family GJQ55_RS00980 PF08279 HTH domain GJQ55_RS00985 PF03309 Type III pantothenate kinase GJQ55_RS01010 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS01010 PF03143 Elongation factor Tu C-terminal domain GJQ55_RS01010 PF03144 Elongation factor Tu domain 2 GJQ55_RS01020 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GJQ55_RS01025 PF02357 Transcription termination factor nusG GJQ55_RS01025 PF00467 KOW motif GJQ55_RS01030 PF03946 Ribosomal protein L11, N-terminal domain GJQ55_RS01030 PF00298 Ribosomal protein L11, RNA binding domain GJQ55_RS01035 PF00687 Ribosomal protein L1p/L10e family GJQ55_RS01040 PF00466 Ribosomal protein L10 GJQ55_RS01045 PF00542 Ribosomal protein L7/L12 C-terminal domain GJQ55_RS01045 PF16320 Ribosomal protein L7/L12 dimerisation domain GJQ55_RS01050 PF00562 RNA polymerase Rpb2, domain 6 GJQ55_RS01050 PF04563 RNA polymerase beta subunit GJQ55_RS01050 PF04561 RNA polymerase Rpb2, domain 2 GJQ55_RS01050 PF04565 RNA polymerase Rpb2, domain 3 GJQ55_RS01050 PF10385 RNA polymerase beta subunit external 1 domain GJQ55_RS01050 PF04560 RNA polymerase Rpb2, domain 7 GJQ55_RS01055 PF04998 RNA polymerase Rpb1, domain 5 GJQ55_RS01055 PF04983 RNA polymerase Rpb1, domain 3 GJQ55_RS01055 PF05000 RNA polymerase Rpb1, domain 4 GJQ55_RS01055 PF00623 RNA polymerase Rpb1, domain 2 GJQ55_RS01055 PF04997 RNA polymerase Rpb1, domain 1 GJQ55_RS01060 PF00164 Ribosomal protein S12/S23 GJQ55_RS01065 PF00177 Ribosomal protein S7p/S5e GJQ55_RS01070 PF03144 Elongation factor Tu domain 2 GJQ55_RS01070 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS01070 PF00679 Elongation factor G C-terminus GJQ55_RS01070 PF14492 Elongation Factor G, domain II GJQ55_RS01070 PF03764 Elongation factor G, domain IV GJQ55_RS01075 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS01075 PF03143 Elongation factor Tu C-terminal domain GJQ55_RS01075 PF03144 Elongation factor Tu domain 2 GJQ55_RS01080 PF00679 Elongation factor G C-terminus GJQ55_RS01080 PF14492 Elongation Factor G, domain II GJQ55_RS01080 PF03764 Elongation factor G, domain IV GJQ55_RS01080 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS01080 PF03144 Elongation factor Tu domain 2 GJQ55_RS01085 PF03143 Elongation factor Tu C-terminal domain GJQ55_RS01085 PF03144 Elongation factor Tu domain 2 GJQ55_RS01085 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS01090 PF00338 Ribosomal protein S10p/S20e GJQ55_RS01095 PF00297 Ribosomal protein L3 GJQ55_RS01100 PF00573 Ribosomal protein L4/L1 family GJQ55_RS01105 PF00276 Ribosomal protein L23 GJQ55_RS01110 PF03947 Ribosomal Proteins L2, C-terminal domain GJQ55_RS01110 PF00181 Ribosomal Proteins L2, RNA binding domain GJQ55_RS01115 PF00203 Ribosomal protein S19 GJQ55_RS01120 PF00237 Ribosomal protein L22p/L17e GJQ55_RS01125 PF07650 KH domain GJQ55_RS01125 PF00189 Ribosomal protein S3, C-terminal domain GJQ55_RS01130 PF00252 Ribosomal protein L16p/L10e GJQ55_RS01135 PF00831 Ribosomal L29 protein GJQ55_RS01140 PF00366 Ribosomal protein S17 GJQ55_RS01145 PF00238 Ribosomal protein L14p/L23e GJQ55_RS01150 PF00467 KOW motif GJQ55_RS01150 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GJQ55_RS01155 PF00281 Ribosomal protein L5 GJQ55_RS01155 PF00673 ribosomal L5P family C-terminus GJQ55_RS01160 PF00253 Ribosomal protein S14p/S29e GJQ55_RS01165 PF00410 Ribosomal protein S8 GJQ55_RS01170 PF00347 Ribosomal protein L6 GJQ55_RS01175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GJQ55_RS01180 PF03719 Ribosomal protein S5, C-terminal domain GJQ55_RS01180 PF00333 Ribosomal protein S5, N-terminal domain GJQ55_RS01185 PF00327 Ribosomal protein L30p/L7e GJQ55_RS01190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GJQ55_RS01195 PF00344 SecY translocase GJQ55_RS01200 PF00444 Ribosomal protein L36 GJQ55_RS01205 PF00416 Ribosomal protein S13/S18 GJQ55_RS01210 PF00411 Ribosomal protein S11 GJQ55_RS01215 PF01479 S4 domain GJQ55_RS01215 PF00163 Ribosomal protein S4/S9 N-terminal domain GJQ55_RS01220 PF01000 RNA polymerase Rpb3/RpoA insert domain GJQ55_RS01220 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GJQ55_RS01220 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GJQ55_RS01225 PF01196 Ribosomal protein L17 GJQ55_RS01230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GJQ55_RS01250 PF00563 EAL domain GJQ55_RS01250 PF00196 Bacterial regulatory proteins, luxR family GJQ55_RS01255 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS01255 PF00072 Response regulator receiver domain GJQ55_RS01255 PF00158 Sigma-54 interaction domain GJQ55_RS01260 PF01654 Cytochrome bd terminal oxidase subunit I GJQ55_RS01265 PF02322 Cytochrome bd terminal oxidase subunit II GJQ55_RS01270 PF08173 Membrane bound YbgT-like protein GJQ55_RS01275 PF00581 Rhodanese-like domain GJQ55_RS01290 PF13244 Domain of unknown function (DUF4040) GJQ55_RS01290 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GJQ55_RS01290 PF00361 Proton-conducting membrane transporter GJQ55_RS01290 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GJQ55_RS01300 PF00361 Proton-conducting membrane transporter GJQ55_RS01305 PF01899 Na+/H+ ion antiporter subunit GJQ55_RS01310 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GJQ55_RS01315 PF03334 Na+/H+ antiporter subunit GJQ55_RS01320 PF18073 Rubredoxin metal binding domain GJQ55_RS01325 PF01053 Cys/Met metabolism PLP-dependent enzyme GJQ55_RS01340 PF04452 RNA methyltransferase GJQ55_RS01350 PF00691 OmpA family GJQ55_RS01350 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJQ55_RS01355 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS01360 PF02609 Exonuclease VII small subunit GJQ55_RS01365 PF00348 Polyprenyl synthetase GJQ55_RS01370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GJQ55_RS01370 PF02779 Transketolase, pyrimidine binding domain GJQ55_RS01370 PF02780 Transketolase, C-terminal domain GJQ55_RS01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS01375 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS01375 PF00989 PAS fold GJQ55_RS01380 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS01380 PF00072 Response regulator receiver domain GJQ55_RS01380 PF00158 Sigma-54 interaction domain GJQ55_RS01385 PF00925 GTP cyclohydrolase II GJQ55_RS01390 PF04298 Putative neutral zinc metallopeptidase GJQ55_RS01400 PF01022 Bacterial regulatory protein, arsR family GJQ55_RS01405 PF01758 Sodium Bile acid symporter family GJQ55_RS01410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GJQ55_RS01410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GJQ55_RS01420 PF00107 Zinc-binding dehydrogenase GJQ55_RS01420 PF08240 Alcohol dehydrogenase GroES-like domain GJQ55_RS01435 PF00478 IMP dehydrogenase / GMP reductase domain GJQ55_RS01435 PF00571 CBS domain GJQ55_RS01445 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS01445 PF00072 Response regulator receiver domain GJQ55_RS01450 PF16750 Sensor domain of 2-component histidine kinase GJQ55_RS01450 PF00672 HAMP domain GJQ55_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS01450 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS01460 PF03060 Nitronate monooxygenase GJQ55_RS01465 PF00561 alpha/beta hydrolase fold GJQ55_RS01470 PF03280 Proteobacterial lipase chaperone protein GJQ55_RS01475 PF00459 Inositol monophosphatase family GJQ55_RS01480 PF13472 GDSL-like Lipase/Acylhydrolase family GJQ55_RS01485 PF00005 ABC transporter GJQ55_RS01495 PF02492 CobW/HypB/UreG, nucleotide-binding domain GJQ55_RS01495 PF07683 Cobalamin synthesis protein cobW C-terminal domain GJQ55_RS01505 PF00781 Diacylglycerol kinase catalytic domain GJQ55_RS01520 PF03061 Thioesterase superfamily GJQ55_RS01530 PF02805 Metal binding domain of Ada GJQ55_RS01530 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GJQ55_RS01530 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GJQ55_RS01530 PF12833 Helix-turn-helix domain GJQ55_RS01535 PF16655 PhoD-like phosphatase, N-terminal domain GJQ55_RS01535 PF09423 PhoD-like phosphatase GJQ55_RS01540 PF00561 alpha/beta hydrolase fold GJQ55_RS01545 PF01145 SPFH domain / Band 7 family GJQ55_RS01555 PF09335 SNARE associated Golgi protein GJQ55_RS01560 PF01053 Cys/Met metabolism PLP-dependent enzyme GJQ55_RS01565 PF00849 RNA pseudouridylate synthase GJQ55_RS01565 PF01479 S4 domain GJQ55_RS01615 PF00743 Flavin-binding monooxygenase-like GJQ55_RS01620 PF00561 alpha/beta hydrolase fold GJQ55_RS01635 PF04073 Aminoacyl-tRNA editing domain GJQ55_RS01650 PF00586 AIR synthase related protein, N-terminal domain GJQ55_RS01650 PF02769 AIR synthase related protein, C-terminal domain GJQ55_RS01655 PF01029 NusB family GJQ55_RS01660 PF00885 6,7-dimethyl-8-ribityllumazine synthase GJQ55_RS01665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GJQ55_RS01665 PF00925 GTP cyclohydrolase II GJQ55_RS01670 PF00677 Lumazine binding domain GJQ55_RS01675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GJQ55_RS01675 PF01872 RibD C-terminal domain GJQ55_RS01680 PF03477 ATP cone domain GJQ55_RS01690 PF00464 Serine hydroxymethyltransferase GJQ55_RS01695 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS01695 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS01695 PF00563 EAL domain GJQ55_RS01700 PF12848 ABC transporter GJQ55_RS01700 PF00005 ABC transporter GJQ55_RS01705 PF07238 PilZ domain GJQ55_RS01710 PF01557 Fumarylacetoacetate (FAA) hydrolase family GJQ55_RS01715 PF00436 Single-strand binding protein family GJQ55_RS01720 PF07690 Major Facilitator Superfamily GJQ55_RS01730 PF17755 UvrA DNA-binding domain GJQ55_RS01730 PF17760 UvrA interaction domain GJQ55_RS01775 PF02666 Phosphatidylserine decarboxylase GJQ55_RS01780 PF00581 Rhodanese-like domain GJQ55_RS01790 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS01795 PF00691 OmpA family GJQ55_RS01795 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJQ55_RS01800 PF03193 RsgA GTPase GJQ55_RS01805 PF00929 Exonuclease GJQ55_RS01810 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS01810 PF17151 Periplasmic sensor domain GJQ55_RS01815 PF08331 Domain of unknown function (DUF1730) GJQ55_RS01820 PF03853 YjeF-related protein N-terminus GJQ55_RS01820 PF01256 Carbohydrate kinase GJQ55_RS01825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GJQ55_RS01830 PF01520 N-acetylmuramoyl-L-alanine amidase GJQ55_RS01830 PF11741 AMIN domain GJQ55_RS01835 PF01119 DNA mismatch repair protein, C-terminal domain GJQ55_RS01835 PF08676 MutL C terminal dimerisation domain GJQ55_RS01845 PF17209 Hfq protein GJQ55_RS01850 PF16360 GTP-binding GTPase Middle Region GJQ55_RS01850 PF13167 GTP-binding GTPase N-terminal GJQ55_RS01850 PF01926 50S ribosome-binding GTPase GJQ55_RS01855 PF01145 SPFH domain / Band 7 family GJQ55_RS01855 PF12221 Bacterial membrane protein N terminal GJQ55_RS01860 PF01145 SPFH domain / Band 7 family GJQ55_RS01870 PF13393 Histidyl-tRNA synthetase GJQ55_RS01875 PF00709 Adenylosuccinate synthetase GJQ55_RS01885 PF03079 ARD/ARD' family GJQ55_RS01890 PF00596 Class II Aldolase and Adducin N-terminal domain GJQ55_RS01895 PF01008 Initiation factor 2 subunit family GJQ55_RS01900 PF00342 Phosphoglucose isomerase GJQ55_RS01905 PF02261 Aspartate decarboxylase GJQ55_RS01910 PF02569 Pantoate-beta-alanine ligase GJQ55_RS01915 PF02548 Ketopantoate hydroxymethyltransferase GJQ55_RS01920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GJQ55_RS01925 PF12627 Probable RNA and SrmB- binding site of polymerase A GJQ55_RS01925 PF01743 Poly A polymerase head domain GJQ55_RS01925 PF12626 Polymerase A arginine-rich C-terminus GJQ55_RS01935 PF00005 ABC transporter GJQ55_RS01940 PF01032 FecCD transport family GJQ55_RS01955 PF03749 Sugar fermentation stimulation protein RE domain GJQ55_RS01955 PF17746 SfsA N-terminal OB domain GJQ55_RS01960 PF00155 Aminotransferase class I and II GJQ55_RS01965 PF01258 Prokaryotic dksA/traR C4-type zinc finger GJQ55_RS01970 PF00749 tRNA synthetases class I (E and Q), catalytic domain GJQ55_RS01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS01980 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS01980 PF00989 PAS fold GJQ55_RS01980 PF08447 PAS fold GJQ55_RS01985 PF00158 Sigma-54 interaction domain GJQ55_RS01985 PF00072 Response regulator receiver domain GJQ55_RS01985 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS02005 PF03104 DNA polymerase family B, exonuclease domain GJQ55_RS02005 PF00136 DNA polymerase family B GJQ55_RS02015 PF03942 DTW domain GJQ55_RS02025 PF07549 SecD/SecF GG Motif GJQ55_RS02025 PF02355 Protein export membrane protein GJQ55_RS02030 PF01699 Sodium/calcium exchanger protein GJQ55_RS02050 PF13180 PDZ domain GJQ55_RS02050 PF03572 Peptidase family S41 GJQ55_RS02055 PF01551 Peptidase family M23 GJQ55_RS02055 PF01551 Peptidase family M23 GJQ55_RS02060 PF01676 Metalloenzyme superfamily GJQ55_RS02060 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GJQ55_RS02065 PF00581 Rhodanese-like domain GJQ55_RS02070 PF02556 Preprotein translocase subunit SecB GJQ55_RS02075 PF07995 Glucose / Sorbosone dehydrogenase GJQ55_RS02080 PF00588 SpoU rRNA Methylase family GJQ55_RS02090 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS02090 PF00072 Response regulator receiver domain GJQ55_RS02090 PF00158 Sigma-54 interaction domain GJQ55_RS02095 PF00989 PAS fold GJQ55_RS02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS02095 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS02105 PF04247 Invasion gene expression up-regulator, SirB GJQ55_RS02110 PF00672 HAMP domain GJQ55_RS02110 PF02743 Cache domain GJQ55_RS02110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS02120 PF01169 Uncharacterized protein family UPF0016 GJQ55_RS02145 PF03776 Septum formation topological specificity factor MinE GJQ55_RS02150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GJQ55_RS02155 PF05209 Septum formation inhibitor MinC, N-terminal domain GJQ55_RS02155 PF03775 Septum formation inhibitor MinC, C-terminal domain GJQ55_RS02165 PF11799 impB/mucB/samB family C-terminal domain GJQ55_RS02165 PF11798 IMS family HHH motif GJQ55_RS02165 PF00817 impB/mucB/samB family GJQ55_RS02170 PF01569 PAP2 superfamily GJQ55_RS02175 PF13439 Glycosyltransferase Family 4 GJQ55_RS02175 PF00534 Glycosyl transferases group 1 GJQ55_RS02180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJQ55_RS02180 PF12833 Helix-turn-helix domain GJQ55_RS02220 PF01266 FAD dependent oxidoreductase GJQ55_RS02250 PF00534 Glycosyl transferases group 1 GJQ55_RS02250 PF13439 Glycosyltransferase Family 4 GJQ55_RS02265 PF13406 Transglycosylase SLT domain GJQ55_RS02270 PF01098 Cell cycle protein GJQ55_RS02275 PF03717 Penicillin-binding Protein dimerisation domain GJQ55_RS02275 PF00905 Penicillin binding protein transpeptidase domain GJQ55_RS02280 PF02590 Predicted SPOUT methyltransferase GJQ55_RS02290 PF01467 Cytidylyltransferase-like GJQ55_RS02295 PF00171 Aldehyde dehydrogenase family GJQ55_RS02305 PF00563 EAL domain GJQ55_RS02305 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS02305 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS02305 PF13188 PAS domain GJQ55_RS02325 PF02810 SEC-C motif GJQ55_RS02340 PF07943 Penicillin-binding protein 5, C-terminal domain GJQ55_RS02340 PF00768 D-alanyl-D-alanine carboxypeptidase GJQ55_RS02345 PF04359 Protein of unknown function (DUF493) GJQ55_RS02350 PF03099 Biotin/lipoate A/B protein ligase family GJQ55_RS02355 PF04055 Radical SAM superfamily GJQ55_RS02355 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GJQ55_RS02365 PF00085 Thioredoxin GJQ55_RS02375 PF01272 Transcription elongation factor, GreA/GreB, C-term GJQ55_RS02375 PF03449 Transcription elongation factor, N-terminal GJQ55_RS02380 PF11412 Disulphide bond corrector protein DsbC GJQ55_RS02380 PF02683 Cytochrome C biogenesis protein transmembrane region GJQ55_RS02385 PF00348 Polyprenyl synthetase GJQ55_RS02390 PF00829 Ribosomal prokaryotic L21 protein GJQ55_RS02395 PF01016 Ribosomal L27 protein GJQ55_RS02400 PF01926 50S ribosome-binding GTPase GJQ55_RS02400 PF01018 GTP1/OBG GJQ55_RS02405 PF01472 PUA domain GJQ55_RS02405 PF00696 Amino acid kinase family GJQ55_RS02410 PF00793 DAHP synthetase I family GJQ55_RS02415 PF01649 Ribosomal protein S20 GJQ55_RS02420 PF03023 Lipid II flippase MurJ GJQ55_RS02425 PF06574 FAD synthetase GJQ55_RS02425 PF01687 Riboflavin kinase GJQ55_RS02430 PF08264 Anticodon-binding domain of tRNA GJQ55_RS02430 PF00133 tRNA synthetases class I (I, L, M and V) GJQ55_RS02430 PF06827 Zinc finger found in FPG and IleRS GJQ55_RS02435 PF01252 Signal peptidase (SPase) II GJQ55_RS02440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS02445 PF02401 LytB protein GJQ55_RS02475 PF05567 Neisseria PilC beta-propeller domain GJQ55_RS02485 PF07963 Prokaryotic N-terminal methylation motif GJQ55_RS02485 PF14245 Type IV pilin PilA GJQ55_RS02490 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS02490 PF00072 Response regulator receiver domain GJQ55_RS02490 PF00158 Sigma-54 interaction domain GJQ55_RS02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS02495 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS02500 PF00795 Carbon-nitrogen hydrolase GJQ55_RS02500 PF02540 NAD synthase GJQ55_RS02505 PF13525 Outer membrane lipoprotein GJQ55_RS02510 PF01479 S4 domain GJQ55_RS02510 PF00849 RNA pseudouridylate synthase GJQ55_RS02515 PF02578 Multi-copper polyphenol oxidoreductase laccase GJQ55_RS02525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GJQ55_RS02525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJQ55_RS02525 PF00205 Thiamine pyrophosphate enzyme, central domain GJQ55_RS02530 PF10369 Small subunit of acetolactate synthase GJQ55_RS02535 PF00472 RF-1 domain GJQ55_RS02540 PF03006 Haemolysin-III related GJQ55_RS02545 PF01541 GIY-YIG catalytic domain GJQ55_RS02565 PF00263 Bacterial type II and III secretion system protein GJQ55_RS02565 PF03958 Bacterial type II/III secretion system short domain GJQ55_RS02570 PF02545 Maf-like protein GJQ55_RS02575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GJQ55_RS02575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GJQ55_RS02605 PF05681 Fumarate hydratase (Fumerase) GJQ55_RS02605 PF05683 Fumarase C-terminus GJQ55_RS02610 PF11892 Domain of unknown function (DUF3412) GJQ55_RS02610 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GJQ55_RS02610 PF03641 Possible lysine decarboxylase GJQ55_RS02615 PF00571 CBS domain GJQ55_RS02615 PF01769 Divalent cation transporter GJQ55_RS02615 PF03448 MgtE intracellular N domain GJQ55_RS02620 PF00909 Ammonium Transporter Family GJQ55_RS02630 PF01842 ACT domain GJQ55_RS02630 PF00551 Formyl transferase GJQ55_RS02635 PF02803 Thiolase, C-terminal domain GJQ55_RS02635 PF00108 Thiolase, N-terminal domain GJQ55_RS02645 PF07044 Protein of unknown function (DUF1329) GJQ55_RS02655 PF01636 Phosphotransferase enzyme family GJQ55_RS02660 PF00156 Phosphoribosyl transferase domain GJQ55_RS02665 PF04055 Radical SAM superfamily GJQ55_RS02665 PF06968 Biotin and Thiamin Synthesis associated domain GJQ55_RS02680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS02680 PF12806 Acetyl-CoA dehydrogenase C-terminal like GJQ55_RS02680 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS02680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS02685 PF12806 Acetyl-CoA dehydrogenase C-terminal like GJQ55_RS02685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS02685 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS02685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS02705 PF04715 Anthranilate synthase component I, N terminal region GJQ55_RS02705 PF00425 chorismate binding enzyme GJQ55_RS02710 PF00117 Glutamine amidotransferase class-I GJQ55_RS02715 PF00591 Glycosyl transferase family, a/b domain GJQ55_RS02715 PF02885 Glycosyl transferase family, helical bundle domain GJQ55_RS02720 PF00218 Indole-3-glycerol phosphate synthase GJQ55_RS02730 PF00834 Ribulose-phosphate 3 epimerase family GJQ55_RS02735 PF13419 Haloacid dehalogenase-like hydrolase GJQ55_RS02740 PF11849 Domain of unknown function (DUF3369) GJQ55_RS02745 PF00027 Cyclic nucleotide-binding domain GJQ55_RS02745 PF13545 Crp-like helix-turn-helix domain GJQ55_RS02750 PF02566 OsmC-like protein GJQ55_RS02755 PF02675 S-adenosylmethionine decarboxylase GJQ55_RS02770 PF05175 Methyltransferase small domain GJQ55_RS02770 PF08468 Methyltransferase small domain N-terminal GJQ55_RS02775 PF13411 MerR HTH family regulatory protein GJQ55_RS02780 PF01740 STAS domain GJQ55_RS02780 PF13426 PAS domain GJQ55_RS02785 PF00719 Inorganic pyrophosphatase GJQ55_RS02790 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS02790 PF00593 TonB dependent receptor GJQ55_RS02800 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GJQ55_RS02805 PF01225 Mur ligase family, catalytic domain GJQ55_RS02805 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS02805 PF08245 Mur ligase middle domain GJQ55_RS02810 PF02441 Flavoprotein GJQ55_RS02825 PF00672 HAMP domain GJQ55_RS02825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS02825 PF12729 Four helix bundle sensory module for signal transduction GJQ55_RS02845 PF06144 DNA polymerase III, delta subunit GJQ55_RS02845 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GJQ55_RS02850 PF04390 Lipopolysaccharide-assembly GJQ55_RS02855 PF13603 Leucyl-tRNA synthetase, Domain 2 GJQ55_RS02855 PF08264 Anticodon-binding domain of tRNA GJQ55_RS02855 PF00133 tRNA synthetases class I (I, L, M and V) GJQ55_RS02865 PF01968 Hydantoinase/oxoprolinase GJQ55_RS02865 PF05378 Hydantoinase/oxoprolinase N-terminal region GJQ55_RS02870 PF08447 PAS fold GJQ55_RS02870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS02875 PF00462 Glutaredoxin GJQ55_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS02890 PF03466 LysR substrate binding domain GJQ55_RS02925 PF00106 short chain dehydrogenase GJQ55_RS02940 PF00875 DNA photolyase GJQ55_RS02940 PF03441 FAD binding domain of DNA photolyase GJQ55_RS02945 PF13411 MerR HTH family regulatory protein GJQ55_RS02960 PF01593 Flavin containing amine oxidoreductase GJQ55_RS02965 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS02965 PF12806 Acetyl-CoA dehydrogenase C-terminal like GJQ55_RS02965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS02965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS02970 PF01370 NAD dependent epimerase/dehydratase family GJQ55_RS02970 PF08338 Domain of unknown function (DUF1731) GJQ55_RS02985 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS02990 PF03459 TOBE domain GJQ55_RS02990 PF00005 ABC transporter GJQ55_RS02995 PF01645 Conserved region in glutamate synthase GJQ55_RS03000 PF17831 Pyruvate dehydrogenase E1 component middle domain GJQ55_RS03000 PF00456 Transketolase, thiamine diphosphate binding domain GJQ55_RS03005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GJQ55_RS03005 PF00364 Biotin-requiring enzyme GJQ55_RS03005 PF02817 e3 binding domain GJQ55_RS03010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS03015 PF01923 Cobalamin adenosyltransferase GJQ55_RS03025 PF02558 Ketopantoate reductase PanE/ApbA GJQ55_RS03025 PF08546 Ketopantoate reductase PanE/ApbA C terminal GJQ55_RS03035 PF04461 Protein of unknown function (DUF520) GJQ55_RS03040 PF07690 Major Facilitator Superfamily GJQ55_RS03045 PF00480 ROK family GJQ55_RS03055 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GJQ55_RS03060 PF02277 Phosphoribosyltransferase GJQ55_RS03070 PF02654 Cobalamin-5-phosphate synthase GJQ55_RS03080 PF03186 CobD/Cbib protein GJQ55_RS03085 PF00155 Aminotransferase class I and II GJQ55_RS03090 PF01497 Periplasmic binding protein GJQ55_RS03095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJQ55_RS03110 PF00210 Ferritin-like domain GJQ55_RS03115 PF02535 ZIP Zinc transporter GJQ55_RS03130 PF01132 Elongation factor P (EF-P) OB domain GJQ55_RS03130 PF08207 Elongation factor P (EF-P) KOW-like domain GJQ55_RS03130 PF09285 Elongation factor P, C-terminal GJQ55_RS03135 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS03135 PF00563 EAL domain GJQ55_RS03135 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS03140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS03140 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS03145 PF02146 Sir2 family GJQ55_RS03150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GJQ55_RS03150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJQ55_RS03155 PF01070 FMN-dependent dehydrogenase GJQ55_RS03160 PF00890 FAD binding domain GJQ55_RS03165 PF13091 PLD-like domain GJQ55_RS03175 PF01668 SmpB protein GJQ55_RS03180 PF00209 Sodium:neurotransmitter symporter family GJQ55_RS03185 PF03364 Polyketide cyclase / dehydrase and lipid transport GJQ55_RS03190 PF03658 RnfH family Ubiquitin GJQ55_RS03195 PF04355 SmpA / OmlA family GJQ55_RS03200 PF01475 Ferric uptake regulator family GJQ55_RS03205 PF02463 RecF/RecN/SMC N terminal domain GJQ55_RS03210 PF01025 GrpE GJQ55_RS03215 PF00012 Hsp70 protein GJQ55_RS03220 PF00226 DnaJ domain GJQ55_RS03220 PF01556 DnaJ C terminal domain GJQ55_RS03220 PF00684 DnaJ central domain GJQ55_RS03225 PF05173 Dihydrodipicolinate reductase, C-terminus GJQ55_RS03225 PF01113 Dihydrodipicolinate reductase, N-terminus GJQ55_RS03230 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS03235 PF00117 Glutamine amidotransferase class-I GJQ55_RS03235 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GJQ55_RS03240 PF02142 MGS-like domain GJQ55_RS03240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJQ55_RS03240 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GJQ55_RS03245 PF01272 Transcription elongation factor, GreA/GreB, C-term GJQ55_RS03245 PF03449 Transcription elongation factor, N-terminal GJQ55_RS03250 PF03061 Thioesterase superfamily GJQ55_RS03255 PF07977 FabA-like domain GJQ55_RS03260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJQ55_RS03260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GJQ55_RS03265 PF01985 CRS1 / YhbY (CRM) domain GJQ55_RS03270 PF01728 FtsJ-like methyltransferase GJQ55_RS03275 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS03275 PF17862 AAA+ lid domain GJQ55_RS03275 PF06480 FtsH Extracellular GJQ55_RS03275 PF01434 Peptidase family M41 GJQ55_RS03280 PF00809 Pterin binding enzyme GJQ55_RS03285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJQ55_RS03285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJQ55_RS03285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJQ55_RS03285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJQ55_RS03290 PF00121 Triosephosphate isomerase GJQ55_RS03295 PF03840 Preprotein translocase SecG subunit GJQ55_RS03305 PF02576 RimP N-terminal domain GJQ55_RS03305 PF17384 RimP C-terminal SH3 domain GJQ55_RS03310 PF08529 NusA N-terminal domain GJQ55_RS03310 PF13184 NusA-like KH domain GJQ55_RS03310 PF00575 S1 RNA binding domain GJQ55_RS03315 PF08364 Bacterial translation initiation factor IF-2 associated region GJQ55_RS03315 PF11987 Translation-initiation factor 2 GJQ55_RS03315 PF04760 Translation initiation factor IF-2, N-terminal region GJQ55_RS03315 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS03320 PF02033 Ribosome-binding factor A GJQ55_RS03325 PF09157 Pseudouridine synthase II TruB, C-terminal GJQ55_RS03325 PF16198 tRNA pseudouridylate synthase B C-terminal domain GJQ55_RS03325 PF01509 TruB family pseudouridylate synthase (N terminal domain) GJQ55_RS03330 PF00312 Ribosomal protein S15 GJQ55_RS03335 PF00013 KH domain GJQ55_RS03335 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GJQ55_RS03335 PF01138 3' exoribonuclease family, domain 1 GJQ55_RS03335 PF03725 3' exoribonuclease family, domain 2 GJQ55_RS03335 PF00575 S1 RNA binding domain GJQ55_RS03355 PF02567 Phenazine biosynthesis-like protein GJQ55_RS03360 PF10996 Beta-Casp domain GJQ55_RS03360 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS03360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJQ55_RS03365 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GJQ55_RS03365 PF02885 Glycosyl transferase family, helical bundle domain GJQ55_RS03365 PF00591 Glycosyl transferase family, a/b domain GJQ55_RS03380 PF00743 Flavin-binding monooxygenase-like GJQ55_RS03385 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GJQ55_RS03395 PF02515 CoA-transferase family III GJQ55_RS03400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS03400 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS03400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS03405 PF00108 Thiolase, N-terminal domain GJQ55_RS03405 PF02803 Thiolase, C-terminal domain GJQ55_RS03410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GJQ55_RS03410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GJQ55_RS03410 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS03415 PF11849 Domain of unknown function (DUF3369) GJQ55_RS03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS03425 PF17200 Single Cache domain 2 GJQ55_RS03425 PF00672 HAMP domain GJQ55_RS03430 PF01926 50S ribosome-binding GTPase GJQ55_RS03430 PF06071 Protein of unknown function (DUF933) GJQ55_RS03435 PF01195 Peptidyl-tRNA hydrolase GJQ55_RS03440 PF14693 Ribosomal protein TL5, C-terminal domain GJQ55_RS03440 PF01386 Ribosomal L25p family GJQ55_RS03445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GJQ55_RS03445 PF14572 Phosphoribosyl synthetase-associated domain GJQ55_RS03455 PF00288 GHMP kinases N terminal domain GJQ55_RS03455 PF08544 GHMP kinases C terminal GJQ55_RS03460 PF03550 Outer membrane lipoprotein LolB GJQ55_RS03470 PF01488 Shikimate / quinate 5-dehydrogenase GJQ55_RS03470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GJQ55_RS03470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GJQ55_RS03475 PF03462 PCRF domain GJQ55_RS03475 PF00472 RF-1 domain GJQ55_RS03480 PF13847 Methyltransferase domain GJQ55_RS03480 PF17827 PrmC N-terminal domain GJQ55_RS03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS03490 PF13580 SIS domain GJQ55_RS03495 PF02021 Uncharacterised protein family UPF0102 GJQ55_RS03500 PF04348 LppC putative lipoprotein GJQ55_RS03505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GJQ55_RS03535 PF05724 Thiopurine S-methyltransferase (TPMT) GJQ55_RS03540 PF01980 tRNA-methyltransferase O GJQ55_RS03540 PF18389 TrmO C-terminal domain GJQ55_RS03545 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GJQ55_RS03605 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS03610 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS03615 PF02472 Biopolymer transport protein ExbD/TolR GJQ55_RS03620 PF03544 Gram-negative bacterial TonB protein C-terminal GJQ55_RS03635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS03640 PF01553 Acyltransferase GJQ55_RS03645 PF04102 SlyX GJQ55_RS03650 PF00313 'Cold-shock' DNA-binding domain GJQ55_RS03655 PF00459 Inositol monophosphatase family GJQ55_RS03660 PF00588 SpoU rRNA Methylase family GJQ55_RS03665 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS03670 PF02082 Transcriptional regulator GJQ55_RS03675 PF00266 Aminotransferase class-V GJQ55_RS03680 PF00334 Nucleoside diphosphate kinase GJQ55_RS03685 PF04055 Radical SAM superfamily GJQ55_RS03695 PF04551 GcpE protein GJQ55_RS03700 PF03129 Anticodon binding domain GJQ55_RS03700 PF13393 Histidyl-tRNA synthetase GJQ55_RS03705 PF09976 Tetratricopeptide repeat-like domain GJQ55_RS03710 PF13360 PQQ-like domain GJQ55_RS03715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GJQ55_RS03715 PF01926 50S ribosome-binding GTPase GJQ55_RS03720 PF12729 Four helix bundle sensory module for signal transduction GJQ55_RS03720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS03720 PF00672 HAMP domain GJQ55_RS03730 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS03735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS03735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS03735 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS03735 PF12806 Acetyl-CoA dehydrogenase C-terminal like GJQ55_RS03740 PF02311 AraC-like ligand binding domain GJQ55_RS03740 PF12833 Helix-turn-helix domain GJQ55_RS03745 PF04304 Protein of unknown function (DUF454) GJQ55_RS03750 PF12697 Alpha/beta hydrolase family GJQ55_RS03760 PF00005 ABC transporter GJQ55_RS03765 PF00593 TonB dependent receptor GJQ55_RS03765 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS03785 PF01814 Hemerythrin HHE cation binding domain GJQ55_RS03790 PF00939 Sodium:sulfate symporter transmembrane region GJQ55_RS03795 PF09334 tRNA synthetases class I (M) GJQ55_RS03795 PF01588 Putative tRNA binding domain GJQ55_RS03800 PF00571 CBS domain GJQ55_RS03800 PF03471 Transporter associated domain GJQ55_RS03800 PF01595 Cyclin M transmembrane N-terminal domain GJQ55_RS03810 PF00448 SRP54-type protein, GTPase domain GJQ55_RS03810 PF02881 SRP54-type protein, helical bundle domain GJQ55_RS03810 PF02978 Signal peptide binding domain GJQ55_RS03815 PF03350 Uncharacterized protein family, UPF0114 GJQ55_RS03820 PF01062 Bestrophin, RFP-TM, chloride channel GJQ55_RS03830 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS03830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GJQ55_RS03840 PF00291 Pyridoxal-phosphate dependent enzyme GJQ55_RS03840 PF14821 Threonine synthase N terminus GJQ55_RS03850 PF00210 Ferritin-like domain GJQ55_RS03855 PF00210 Ferritin-like domain GJQ55_RS03875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GJQ55_RS03875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GJQ55_RS03880 PF01261 Xylose isomerase-like TIM barrel GJQ55_RS03885 PF06945 Protein of unknown function (DUF1289) GJQ55_RS03890 PF00313 'Cold-shock' DNA-binding domain GJQ55_RS03895 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS03900 PF10576 Iron-sulfur binding domain of endonuclease III GJQ55_RS03900 PF00633 Helix-hairpin-helix motif GJQ55_RS03900 PF00730 HhH-GPD superfamily base excision DNA repair protein GJQ55_RS03905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GJQ55_RS03910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GJQ55_RS03915 PF04321 RmlD substrate binding domain GJQ55_RS03920 PF16363 GDP-mannose 4,6 dehydratase GJQ55_RS03925 PF14602 Hexapeptide repeat of succinyl-transferase GJQ55_RS03925 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GJQ55_RS03930 PF03960 ArsC family GJQ55_RS03945 PF02421 Ferrous iron transport protein B GJQ55_RS03945 PF07670 Nucleoside recognition GJQ55_RS03945 PF17910 FeoB cytosolic helical domain GJQ55_RS03945 PF07664 Ferrous iron transport protein B C terminus GJQ55_RS03950 PF17910 FeoB cytosolic helical domain GJQ55_RS03950 PF04023 FeoA domain GJQ55_RS03950 PF02421 Ferrous iron transport protein B GJQ55_RS03950 PF07670 Nucleoside recognition GJQ55_RS03950 PF07664 Ferrous iron transport protein B C terminus GJQ55_RS03960 PF17876 Cold shock domain GJQ55_RS03960 PF08206 Ribonuclease B OB domain GJQ55_RS03960 PF00773 RNB domain GJQ55_RS03960 PF00575 S1 RNA binding domain GJQ55_RS03965 PF16655 PhoD-like phosphatase, N-terminal domain GJQ55_RS03965 PF09423 PhoD-like phosphatase GJQ55_RS03975 PF12706 Beta-lactamase superfamily domain GJQ55_RS03980 PF01625 Peptide methionine sulfoxide reductase GJQ55_RS03985 PF13614 AAA domain GJQ55_RS03990 PF01026 TatD related DNase GJQ55_RS04000 PF07044 Protein of unknown function (DUF1329) GJQ55_RS04005 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GJQ55_RS04005 PF01464 Transglycosylase SLT domain GJQ55_RS04025 PF00216 Bacterial DNA-binding protein GJQ55_RS04040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GJQ55_RS04050 PF01050 Mannose-6-phosphate isomerase GJQ55_RS04050 PF00483 Nucleotidyl transferase GJQ55_RS04055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJQ55_RS04055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJQ55_RS04055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJQ55_RS04055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJQ55_RS04065 PF00534 Glycosyl transferases group 1 GJQ55_RS04065 PF13439 Glycosyltransferase Family 4 GJQ55_RS04085 PF16363 GDP-mannose 4,6 dehydratase GJQ55_RS04090 PF16363 GDP-mannose 4,6 dehydratase GJQ55_RS04095 PF00862 Sucrose synthase GJQ55_RS04095 PF00534 Glycosyl transferases group 1 GJQ55_RS04125 PF00483 Nucleotidyl transferase GJQ55_RS04130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GJQ55_RS04130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GJQ55_RS04130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GJQ55_RS04155 PF01501 Glycosyl transferase family 8 GJQ55_RS04155 PF00535 Glycosyl transferase family 2 GJQ55_RS04180 PF00535 Glycosyl transferase family 2 GJQ55_RS04185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GJQ55_RS04185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GJQ55_RS04185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GJQ55_RS04190 PF05598 Transposase domain (DUF772) GJQ55_RS04190 PF01609 Transposase DDE domain GJQ55_RS04195 PF01370 NAD dependent epimerase/dehydratase family GJQ55_RS04200 PF01370 NAD dependent epimerase/dehydratase family GJQ55_RS04205 PF02397 Bacterial sugar transferase GJQ55_RS04225 PF00005 ABC transporter GJQ55_RS04255 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS04260 PF03466 LysR substrate binding domain GJQ55_RS04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS04270 PF02678 Pirin GJQ55_RS04270 PF17954 Quercetinase C-terminal cupin domain GJQ55_RS04280 PF01842 ACT domain GJQ55_RS04280 PF00742 Homoserine dehydrogenase GJQ55_RS04280 PF03447 Homoserine dehydrogenase, NAD binding domain GJQ55_RS04285 PF03466 LysR substrate binding domain GJQ55_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS04290 PF01263 Aldose 1-epimerase GJQ55_RS04300 PF00692 dUTPase GJQ55_RS04315 PF01734 Patatin-like phospholipase GJQ55_RS04320 PF05175 Methyltransferase small domain GJQ55_RS04325 PF01264 Chorismate synthase GJQ55_RS04330 PF12832 MFS_1 like family GJQ55_RS04345 PF00561 alpha/beta hydrolase fold GJQ55_RS04345 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJQ55_RS04375 PF14659 Phage integrase, N-terminal SAM-like domain GJQ55_RS04375 PF00589 Phage integrase family GJQ55_RS04385 PF13411 MerR HTH family regulatory protein GJQ55_RS04395 PF01252 Signal peptidase (SPase) II GJQ55_RS04405 PF00394 Multicopper oxidase GJQ55_RS04405 PF07731 Multicopper oxidase GJQ55_RS04405 PF07732 Multicopper oxidase GJQ55_RS04415 PF05275 Copper resistance protein B precursor (CopB) GJQ55_RS04435 PF04945 YHS domain GJQ55_RS04440 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS04440 PF00072 Response regulator receiver domain GJQ55_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS04445 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS04445 PF00672 HAMP domain GJQ55_RS04450 PF00072 Response regulator receiver domain GJQ55_RS04450 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS04475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJQ55_RS04480 PF00873 AcrB/AcrD/AcrF family GJQ55_RS04505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJQ55_RS04505 PF00529 HlyD membrane-fusion protein of T1SS GJQ55_RS04505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJQ55_RS04505 PF00529 HlyD membrane-fusion protein of T1SS GJQ55_RS04510 PF00873 AcrB/AcrD/AcrF family GJQ55_RS04515 PF00403 Heavy-metal-associated domain GJQ55_RS04540 PF00970 Oxidoreductase FAD-binding domain GJQ55_RS04540 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS04540 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS04600 PF00141 Peroxidase GJQ55_RS04610 PF01804 Penicillin amidase GJQ55_RS04615 PF00106 short chain dehydrogenase GJQ55_RS04625 PF01068 ATP dependent DNA ligase domain GJQ55_RS04625 PF14743 DNA ligase OB-like domain GJQ55_RS04630 PF01368 DHH family GJQ55_RS04630 PF02272 DHHA1 domain GJQ55_RS04630 PF17768 RecJ OB domain GJQ55_RS04640 PF00873 AcrB/AcrD/AcrF family GJQ55_RS04645 PF00529 HlyD membrane-fusion protein of T1SS GJQ55_RS04645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJQ55_RS04665 PF01883 Iron-sulfur cluster assembly protein GJQ55_RS04670 PF01521 Iron-sulphur cluster biosynthesis GJQ55_RS04675 PF00266 Aminotransferase class-V GJQ55_RS04680 PF01458 Uncharacterized protein family (UPF0051) GJQ55_RS04685 PF00005 ABC transporter GJQ55_RS04690 PF01458 Uncharacterized protein family (UPF0051) GJQ55_RS04705 PF00899 ThiF family GJQ55_RS04710 PF04245 37-kD nucleoid-associated bacterial protein GJQ55_RS04715 PF00156 Phosphoribosyl transferase domain GJQ55_RS04720 PF00860 Permease family GJQ55_RS04730 PF00255 Glutathione peroxidase GJQ55_RS04735 PF02333 Phytase GJQ55_RS04770 PF03358 NADPH-dependent FMN reductase GJQ55_RS04775 PF03960 ArsC family GJQ55_RS04780 PF03631 Virulence factor BrkB GJQ55_RS04795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJQ55_RS04795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJQ55_RS04795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJQ55_RS04795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJQ55_RS04800 PF02719 Polysaccharide biosynthesis protein GJQ55_RS04805 PF06062 Uncharacterised protein family (UPF0231) GJQ55_RS04810 PF00929 Exonuclease GJQ55_RS04815 PF01979 Amidohydrolase family GJQ55_RS04820 PF00691 OmpA family GJQ55_RS04825 PF00764 Arginosuccinate synthase GJQ55_RS04830 PF01863 Protein of unknown function DUF45 GJQ55_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS04835 PF03466 LysR substrate binding domain GJQ55_RS04840 PF00970 Oxidoreductase FAD-binding domain GJQ55_RS04840 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS04855 PF00672 HAMP domain GJQ55_RS04855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS04875 PF00106 short chain dehydrogenase GJQ55_RS04880 PF00675 Insulinase (Peptidase family M16) GJQ55_RS04880 PF05193 Peptidase M16 inactive domain GJQ55_RS04880 PF16187 Middle or third domain of peptidase_M16 GJQ55_RS04890 PF00072 Response regulator receiver domain GJQ55_RS04890 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS04915 PF01545 Cation efflux family GJQ55_RS04915 PF16916 Dimerisation domain of Zinc Transporter GJQ55_RS04925 PF00360 Phytochrome region GJQ55_RS04925 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS04925 PF01590 GAF domain GJQ55_RS04925 PF00563 EAL domain GJQ55_RS04930 PF01553 Acyltransferase GJQ55_RS04935 PF01515 Phosphate acetyl/butaryl transferase GJQ55_RS04935 PF07085 DRTGG domain GJQ55_RS04940 PF00871 Acetokinase family GJQ55_RS04950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GJQ55_RS04975 PF06969 HemN C-terminal domain GJQ55_RS04975 PF04055 Radical SAM superfamily GJQ55_RS04980 PF03989 DNA gyrase C-terminal domain, beta-propeller GJQ55_RS04980 PF00521 DNA gyrase/topoisomerase IV, subunit A GJQ55_RS04990 PF00266 Aminotransferase class-V GJQ55_RS04995 PF01842 ACT domain GJQ55_RS04995 PF01817 Chorismate mutase type II GJQ55_RS04995 PF00800 Prephenate dehydratase GJQ55_RS05000 PF00155 Aminotransferase class I and II GJQ55_RS05005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GJQ55_RS05010 PF02224 Cytidylate kinase GJQ55_RS05015 PF00575 S1 RNA binding domain GJQ55_RS05025 PF00551 Formyl transferase GJQ55_RS05030 PF02769 AIR synthase related protein, C-terminal domain GJQ55_RS05030 PF00586 AIR synthase related protein, N-terminal domain GJQ55_RS05040 PF00308 Bacterial dnaA protein GJQ55_RS05045 PF00155 Aminotransferase class I and II GJQ55_RS05050 PF02151 UvrB/uvrC motif GJQ55_RS05050 PF12344 Ultra-violet resistance protein B GJQ55_RS05050 PF17757 UvrB interaction domain GJQ55_RS05050 PF00271 Helicase conserved C-terminal domain GJQ55_RS05050 PF04851 Type III restriction enzyme, res subunit GJQ55_RS05065 PF02036 SCP-2 sterol transfer family GJQ55_RS05070 PF01136 Peptidase family U32 GJQ55_RS05075 PF01136 Peptidase family U32 GJQ55_RS05080 PF08859 DGC domain GJQ55_RS05085 PF00034 Cytochrome c GJQ55_RS05095 PF00510 Cytochrome c oxidase subunit III GJQ55_RS05110 PF00115 Cytochrome C and Quinol oxidase polypeptide I GJQ55_RS05115 PF00034 Cytochrome c GJQ55_RS05120 PF07728 AAA domain (dynein-related subfamily) GJQ55_RS05120 PF08406 CbbQ/NirQ/NorQ C-terminal GJQ55_RS05125 PF00593 TonB dependent receptor GJQ55_RS05125 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS05150 PF07730 Histidine kinase GJQ55_RS05150 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GJQ55_RS05150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS05150 PF00672 HAMP domain GJQ55_RS05155 PF00384 Molybdopterin oxidoreductase GJQ55_RS05155 PF01568 Molydopterin dinucleotide binding domain GJQ55_RS05155 PF14710 Respiratory nitrate reductase alpha N-terminal GJQ55_RS05160 PF13247 4Fe-4S dicluster domain GJQ55_RS05160 PF14711 Respiratory nitrate reductase beta C-terminal GJQ55_RS05165 PF02613 Nitrate reductase delta subunit GJQ55_RS05170 PF02665 Nitrate reductase gamma subunit GJQ55_RS05175 PF00639 PPIC-type PPIASE domain GJQ55_RS05175 PF09312 SurA N-terminal domain GJQ55_RS05185 PF07690 Major Facilitator Superfamily GJQ55_RS05195 PF07690 Major Facilitator Superfamily GJQ55_RS05220 PF02391 MoaE protein GJQ55_RS05225 PF02597 ThiS family GJQ55_RS05230 PF01967 MoaC family GJQ55_RS05235 PF00994 Probable molybdopterin binding domain GJQ55_RS05240 PF12804 MobA-like NTP transferase domain GJQ55_RS05245 PF06463 Molybdenum Cofactor Synthesis C GJQ55_RS05245 PF04055 Radical SAM superfamily GJQ55_RS05250 PF00196 Bacterial regulatory proteins, luxR family GJQ55_RS05250 PF00072 Response regulator receiver domain GJQ55_RS05255 PF00994 Probable molybdopterin binding domain GJQ55_RS05255 PF03454 MoeA C-terminal region (domain IV) GJQ55_RS05255 PF03453 MoeA N-terminal region (domain I and II) GJQ55_RS05260 PF00899 ThiF family GJQ55_RS05265 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS05265 PF00158 Sigma-54 interaction domain GJQ55_RS05270 PF01814 Hemerythrin HHE cation binding domain GJQ55_RS05270 PF04405 Domain of Unknown function (DUF542) GJQ55_RS05275 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GJQ55_RS05280 PF00994 Probable molybdopterin binding domain GJQ55_RS05285 PF01965 DJ-1/PfpI family GJQ55_RS05290 PF04116 Fatty acid hydroxylase superfamily GJQ55_RS05295 PF12833 Helix-turn-helix domain GJQ55_RS05295 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJQ55_RS05300 PF03129 Anticodon binding domain GJQ55_RS05300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GJQ55_RS05300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJQ55_RS05300 PF02824 TGS domain GJQ55_RS05305 PF00707 Translation initiation factor IF-3, C-terminal domain GJQ55_RS05305 PF05198 Translation initiation factor IF-3, N-terminal domain GJQ55_RS05310 PF01632 Ribosomal protein L35 GJQ55_RS05315 PF00453 Ribosomal protein L20 GJQ55_RS05320 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GJQ55_RS05320 PF01409 tRNA synthetases class II core domain (F) GJQ55_RS05325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GJQ55_RS05325 PF01588 Putative tRNA binding domain GJQ55_RS05325 PF03147 Ferredoxin-fold anticodon binding domain GJQ55_RS05325 PF03484 tRNA synthetase B5 domain GJQ55_RS05325 PF03483 B3/4 domain GJQ55_RS05330 PF00216 Bacterial DNA-binding protein GJQ55_RS05355 PF02687 FtsX-like permease family GJQ55_RS05355 PF12704 MacB-like periplasmic core domain GJQ55_RS05355 PF00005 ABC transporter GJQ55_RS05360 PF00005 ABC transporter GJQ55_RS05360 PF02687 FtsX-like permease family GJQ55_RS05360 PF12704 MacB-like periplasmic core domain GJQ55_RS05365 PF00005 ABC transporter GJQ55_RS05365 PF02687 FtsX-like permease family GJQ55_RS05365 PF12704 MacB-like periplasmic core domain GJQ55_RS05375 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) GJQ55_RS05380 PF02222 ATP-grasp domain GJQ55_RS05380 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GJQ55_RS05385 PF00731 AIR carboxylase GJQ55_RS05395 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS05395 PF00501 AMP-binding enzyme GJQ55_RS05400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS05400 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS05400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS05405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS05405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS05405 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS05415 PF03883 Peroxide stress protein YaaA GJQ55_RS05430 PF00561 alpha/beta hydrolase fold GJQ55_RS05430 PF08386 TAP-like protein GJQ55_RS05435 PF08411 Exonuclease C-terminal GJQ55_RS05435 PF00929 Exonuclease GJQ55_RS05445 PF13194 Domain of unknown function (DUF4010) GJQ55_RS05470 PF00924 Mechanosensitive ion channel GJQ55_RS05475 PF01925 Sulfite exporter TauE/SafE GJQ55_RS05480 PF03880 DbpA RNA binding domain GJQ55_RS05480 PF00271 Helicase conserved C-terminal domain GJQ55_RS05480 PF00270 DEAD/DEAH box helicase GJQ55_RS05485 PF05958 tRNA (Uracil-5-)-methyltransferase GJQ55_RS05500 PF11871 Domain of unknown function (DUF3391) GJQ55_RS05500 PF01966 HD domain GJQ55_RS05510 PF04225 Opacity-associated protein A LysM-like domain GJQ55_RS05510 PF01551 Peptidase family M23 GJQ55_RS05515 PF13742 OB-fold nucleic acid binding domain GJQ55_RS05515 PF13742 OB-fold nucleic acid binding domain GJQ55_RS05515 PF02601 Exonuclease VII, large subunit GJQ55_RS05515 PF02601 Exonuclease VII, large subunit GJQ55_RS05535 PF00571 CBS domain GJQ55_RS05535 PF00478 IMP dehydrogenase / GMP reductase domain GJQ55_RS05540 PF00117 Glutamine amidotransferase class-I GJQ55_RS05540 PF00958 GMP synthase C terminal domain GJQ55_RS05540 PF02540 NAD synthase GJQ55_RS05545 PF01381 Helix-turn-helix GJQ55_RS05550 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB GJQ55_RS05555 PF00892 EamA-like transporter family GJQ55_RS05570 PF00313 'Cold-shock' DNA-binding domain GJQ55_RS05580 PF03435 Saccharopine dehydrogenase NADP binding domain GJQ55_RS05590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS05590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GJQ55_RS05595 PF07152 YaeQ protein GJQ55_RS05600 PF00581 Rhodanese-like domain GJQ55_RS05600 PF17773 UPF0176 acylphosphatase like domain GJQ55_RS05615 PF02508 Rnf-Nqr subunit, membrane protein GJQ55_RS05620 PF04205 FMN-binding domain GJQ55_RS05625 PF03116 NQR2, RnfD, RnfE family GJQ55_RS05630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GJQ55_RS05630 PF12838 4Fe-4S dicluster domain GJQ55_RS05630 PF13375 RnfC Barrel sandwich hybrid domain GJQ55_RS05630 PF10531 SLBB domain GJQ55_RS05635 PF04060 Putative Fe-S cluster GJQ55_RS05640 PF02508 Rnf-Nqr subunit, membrane protein GJQ55_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS05655 PF12911 N-terminal TM domain of oligopeptide transport permease C GJQ55_RS05655 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS05660 PF00005 ABC transporter GJQ55_RS05660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GJQ55_RS05670 PF10609 NUBPL iron-transfer P-loop NTPase GJQ55_RS05675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GJQ55_RS05675 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS05725 PF00144 Beta-lactamase GJQ55_RS05730 PF02384 N-6 DNA Methylase GJQ55_RS05735 PF01420 Type I restriction modification DNA specificity domain GJQ55_RS05745 PF02661 Fic/DOC family GJQ55_RS05745 PF13784 Fic/DOC family N-terminal GJQ55_RS05750 PF18766 SWI2/SNF2 ATPase GJQ55_RS05750 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GJQ55_RS05750 PF11867 Domain of unknown function (DUF3387) GJQ55_RS05755 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GJQ55_RS05755 PF01464 Transglycosylase SLT domain GJQ55_RS05760 PF03129 Anticodon binding domain GJQ55_RS05760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJQ55_RS05760 PF04073 Aminoacyl-tRNA editing domain GJQ55_RS05770 PF03352 Methyladenine glycosylase GJQ55_RS05795 PF14824 Sirohaem biosynthesis protein central GJQ55_RS05795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GJQ55_RS05795 PF10414 Sirohaem synthase dimerisation region GJQ55_RS05800 PF04324 BFD-like [2Fe-2S] binding domain GJQ55_RS05800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GJQ55_RS05800 PF01568 Molydopterin dinucleotide binding domain GJQ55_RS05800 PF00384 Molybdopterin oxidoreductase GJQ55_RS05805 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS05805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GJQ55_RS05805 PF18267 Rubredoxin NAD+ reductase C-terminal domain GJQ55_RS05805 PF04324 BFD-like [2Fe-2S] binding domain GJQ55_RS05805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GJQ55_RS05810 PF13806 Rieske-like [2Fe-2S] domain GJQ55_RS05815 PF04324 BFD-like [2Fe-2S] binding domain GJQ55_RS05815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GJQ55_RS05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS05815 PF18267 Rubredoxin NAD+ reductase C-terminal domain GJQ55_RS05830 PF03861 ANTAR domain GJQ55_RS05830 PF08376 Nitrate and nitrite sensing GJQ55_RS05835 PF00005 ABC transporter GJQ55_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component GJQ55_RS05850 PF04055 Radical SAM superfamily GJQ55_RS05850 PF11842 Domain of unknown function (DUF3362) GJQ55_RS05850 PF08497 Radical SAM N-terminal GJQ55_RS05885 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GJQ55_RS05885 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GJQ55_RS05890 PF17946 RecC C-terminal domain GJQ55_RS05895 PF13361 UvrD-like helicase C-terminal domain GJQ55_RS05895 PF00580 UvrD/REP helicase N-terminal domain GJQ55_RS05895 PF12705 PD-(D/E)XK nuclease superfamily GJQ55_RS05900 PF13538 UvrD-like helicase C-terminal domain GJQ55_RS05920 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding GJQ55_RS05920 PF18381 YcaO cyclodehydratase C-terminal domain GJQ55_RS05925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJQ55_RS05925 PF02785 Biotin carboxylase C-terminal domain GJQ55_RS05925 PF00289 Biotin carboxylase, N-terminal domain GJQ55_RS05930 PF00109 Beta-ketoacyl synthase, N-terminal domain GJQ55_RS05930 PF02801 Beta-ketoacyl synthase, C-terminal domain GJQ55_RS05940 PF01266 FAD dependent oxidoreductase GJQ55_RS05940 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GJQ55_RS05945 PF00563 EAL domain GJQ55_RS05945 PF08668 HDOD domain GJQ55_RS05950 PF01584 CheW-like domain GJQ55_RS05950 PF00072 Response regulator receiver domain GJQ55_RS05955 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS05955 PF03473 MOSC domain GJQ55_RS05955 PF03476 MOSC N-terminal beta barrel domain GJQ55_RS05960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GJQ55_RS05960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GJQ55_RS05965 PF00285 Citrate synthase, C-terminal domain GJQ55_RS05970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GJQ55_RS05975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GJQ55_RS05980 PF02910 Fumarate reductase flavoprotein C-term GJQ55_RS05980 PF00890 FAD binding domain GJQ55_RS05985 PF13085 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS05990 PF16870 2-oxoglutarate dehydrogenase C-terminal GJQ55_RS05990 PF00676 Dehydrogenase E1 component GJQ55_RS05990 PF02779 Transketolase, pyrimidine binding domain GJQ55_RS05990 PF16078 2-oxoglutarate dehydrogenase N-terminus GJQ55_RS05995 PF02817 e3 binding domain GJQ55_RS05995 PF00364 Biotin-requiring enzyme GJQ55_RS05995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GJQ55_RS06000 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS06000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_RS06005 PF08442 ATP-grasp domain GJQ55_RS06005 PF00549 CoA-ligase GJQ55_RS06010 PF02629 CoA binding domain GJQ55_RS06010 PF00549 CoA-ligase GJQ55_RS06015 PF16177 Acetyl-coenzyme A synthetase N-terminus GJQ55_RS06015 PF00501 AMP-binding enzyme GJQ55_RS06015 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS06025 PF00005 ABC transporter GJQ55_RS06030 PF01061 ABC-2 type transporter GJQ55_RS06035 PF14489 QueF-like protein GJQ55_RS06035 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GJQ55_RS06040 PF00211 Adenylate and Guanylate cyclase catalytic domain GJQ55_RS06040 PF00072 Response regulator receiver domain GJQ55_RS06055 PF00749 tRNA synthetases class I (E and Q), catalytic domain GJQ55_RS06080 PF02348 Cytidylyltransferase GJQ55_RS06085 PF13673 Acetyltransferase (GNAT) domain GJQ55_RS06090 PF08007 Cupin superfamily protein GJQ55_RS06095 PF08328 Adenylosuccinate lyase C-terminal GJQ55_RS06095 PF00206 Lyase GJQ55_RS06110 PF01274 Malate synthase GJQ55_RS06125 PF13401 AAA domain GJQ55_RS06125 PF01471 Putative peptidoglycan binding domain GJQ55_RS06135 PF06733 DEAD_2 GJQ55_RS06135 PF13307 Helicase C-terminal domain GJQ55_RS06150 PF02687 FtsX-like permease family GJQ55_RS06150 PF12704 MacB-like periplasmic core domain GJQ55_RS06155 PF00005 ABC transporter GJQ55_RS06165 PF03772 Competence protein GJQ55_RS06165 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS06170 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS06175 PF02472 Biopolymer transport protein ExbD/TolR GJQ55_RS06180 PF00664 ABC transporter transmembrane region GJQ55_RS06180 PF00005 ABC transporter GJQ55_RS06185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GJQ55_RS06190 PF03966 Trm112p-like protein GJQ55_RS06195 PF01451 Low molecular weight phosphotyrosine protein phosphatase GJQ55_RS06200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GJQ55_RS06200 PF01565 FAD binding domain GJQ55_RS06205 PF00149 Calcineurin-like phosphoesterase GJQ55_RS06210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GJQ55_RS06215 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GJQ55_RS06215 PF00749 tRNA synthetases class I (E and Q), catalytic domain GJQ55_RS06220 PF09190 DALR domain GJQ55_RS06220 PF01406 tRNA synthetases class I (C) catalytic domain GJQ55_RS06225 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GJQ55_RS06225 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GJQ55_RS06250 PF05697 Bacterial trigger factor protein (TF) GJQ55_RS06250 PF05698 Bacterial trigger factor protein (TF) C-terminus GJQ55_RS06250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS06255 PF00574 Clp protease GJQ55_RS06260 PF07724 AAA domain (Cdc48 subfamily) GJQ55_RS06260 PF10431 C-terminal, D2-small domain, of ClpB protein GJQ55_RS06260 PF06689 ClpX C4-type zinc finger GJQ55_RS06265 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS06265 PF05362 Lon protease (S16) C-terminal proteolytic domain GJQ55_RS06265 PF02190 ATP-dependent protease La (LON) substrate-binding domain GJQ55_RS06270 PF00216 Bacterial DNA-binding protein GJQ55_RS06285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GJQ55_RS06290 PF01476 LysM domain GJQ55_RS06290 PF01464 Transglycosylase SLT domain GJQ55_RS06300 PF00075 RNase H GJQ55_RS06305 PF00929 Exonuclease GJQ55_RS06325 PF01022 Bacterial regulatory protein, arsR family GJQ55_RS06330 PF02424 ApbE family GJQ55_RS06340 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS06340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_RS06355 PF00923 Transaldolase/Fructose-6-phosphate aldolase GJQ55_RS06360 PF01207 Dihydrouridine synthase (Dus) GJQ55_RS06365 PF04356 Protein of unknown function (DUF489) GJQ55_RS06375 PF00293 NUDIX domain GJQ55_RS06380 PF00849 RNA pseudouridylate synthase GJQ55_RS06385 PF03971 Monomeric isocitrate dehydrogenase GJQ55_RS06390 PF00313 'Cold-shock' DNA-binding domain GJQ55_RS06395 PF02617 ATP-dependent Clp protease adaptor protein ClpS GJQ55_RS06400 PF07724 AAA domain (Cdc48 subfamily) GJQ55_RS06400 PF10431 C-terminal, D2-small domain, of ClpB protein GJQ55_RS06400 PF17871 AAA lid domain GJQ55_RS06400 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS06400 PF02861 Clp amino terminal domain, pathogenicity island component GJQ55_RS06405 PF01176 Translation initiation factor 1A / IF-1 GJQ55_RS06410 PF04377 Arginine-tRNA-protein transferase, C terminus GJQ55_RS06410 PF04376 Arginine-tRNA-protein transferase, N terminus GJQ55_RS06415 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GJQ55_RS06430 PF03548 Outer membrane lipoprotein carrier protein LolA GJQ55_RS06435 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS06435 PF16193 AAA C-terminal domain GJQ55_RS06435 PF12002 MgsA AAA+ ATPase C terminal GJQ55_RS06440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GJQ55_RS06445 PF02403 Seryl-tRNA synthetase N-terminal domain GJQ55_RS06445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJQ55_RS06450 PF10414 Sirohaem synthase dimerisation region GJQ55_RS06450 PF14824 Sirohaem biosynthesis protein central GJQ55_RS06450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GJQ55_RS06455 PF02743 Cache domain GJQ55_RS06455 PF00672 HAMP domain GJQ55_RS06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS06460 PF02885 Glycosyl transferase family, helical bundle domain GJQ55_RS06460 PF00591 Glycosyl transferase family, a/b domain GJQ55_RS06465 PF04358 DsrC like protein GJQ55_RS06475 PF02635 DsrE/DsrF-like family GJQ55_RS06480 PF02635 DsrE/DsrF-like family GJQ55_RS06490 PF00850 Histone deacetylase domain GJQ55_RS06495 PF00583 Acetyltransferase (GNAT) family GJQ55_RS06495 PF13380 CoA binding domain GJQ55_RS06495 PF13607 Succinyl-CoA ligase like flavodoxin domain GJQ55_RS06500 PF00196 Bacterial regulatory proteins, luxR family GJQ55_RS06500 PF00072 Response regulator receiver domain GJQ55_RS06505 PF01541 GIY-YIG catalytic domain GJQ55_RS06505 PF02151 UvrB/uvrC motif GJQ55_RS06505 PF08459 UvrC Helix-hairpin-helix N-terminal GJQ55_RS06510 PF01066 CDP-alcohol phosphatidyltransferase GJQ55_RS06540 PF01507 Phosphoadenosine phosphosulfate reductase family GJQ55_RS06550 PF04715 Anthranilate synthase component I, N terminal region GJQ55_RS06550 PF00425 chorismate binding enzyme GJQ55_RS06585 PF03618 Kinase/pyrophosphorylase GJQ55_RS06590 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GJQ55_RS06590 PF00391 PEP-utilising enzyme, mobile domain GJQ55_RS06590 PF02896 PEP-utilising enzyme, TIM barrel domain GJQ55_RS06600 PF03737 Aldolase/RraA GJQ55_RS06605 PF07729 FCD domain GJQ55_RS06605 PF00392 Bacterial regulatory proteins, gntR family GJQ55_RS06615 PF00285 Citrate synthase, C-terminal domain GJQ55_RS06620 PF00330 Aconitase family (aconitate hydratase) GJQ55_RS06620 PF00694 Aconitase C-terminal domain GJQ55_RS06630 PF04303 PrpF protein GJQ55_RS06640 PF12111 Polyribonucleotide phosphorylase C terminal GJQ55_RS06640 PF10150 Ribonuclease E/G family GJQ55_RS06640 PF00575 S1 RNA binding domain GJQ55_RS06650 PF00849 RNA pseudouridylate synthase GJQ55_RS06650 PF01479 S4 domain GJQ55_RS06655 PF13419 Haloacid dehalogenase-like hydrolase GJQ55_RS06660 PF01343 Peptidase family S49 GJQ55_RS06665 PF02620 Large ribosomal RNA subunit accumulation protein YceD GJQ55_RS06670 PF01783 Ribosomal L32p protein family GJQ55_RS06675 PF02504 Fatty acid synthesis protein GJQ55_RS06680 PF00698 Acyl transferase domain GJQ55_RS06690 PF00550 Phosphopantetheine attachment site GJQ55_RS06695 PF00109 Beta-ketoacyl synthase, N-terminal domain GJQ55_RS06695 PF02801 Beta-ketoacyl synthase, C-terminal domain GJQ55_RS06700 PF01063 Amino-transferase class IV GJQ55_RS06705 PF02618 YceG-like family GJQ55_RS06710 PF02223 Thymidylate kinase GJQ55_RS06715 PF09115 DNA polymerase III, delta subunit, C terminal GJQ55_RS06725 PF00266 Aminotransferase class-V GJQ55_RS06730 PF08367 Peptidase M16C associated GJQ55_RS06730 PF00675 Insulinase (Peptidase family M16) GJQ55_RS06730 PF05193 Peptidase M16 inactive domain GJQ55_RS06740 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS06745 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS06750 PF02472 Biopolymer transport protein ExbD/TolR GJQ55_RS06755 PF03544 Gram-negative bacterial TonB protein C-terminal GJQ55_RS06765 PF03372 Endonuclease/Exonuclease/phosphatase family GJQ55_RS06770 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS06770 PF00593 TonB dependent receptor GJQ55_RS06775 PF02568 Thiamine biosynthesis protein (ThiI) GJQ55_RS06775 PF02926 THUMP domain GJQ55_RS06780 PF02899 Phage integrase, N-terminal SAM-like domain GJQ55_RS06780 PF00589 Phage integrase family GJQ55_RS06785 PF12146 Serine aminopeptidase, S33 GJQ55_RS06790 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS06800 PF02583 Metal-sensitive transcriptional repressor GJQ55_RS06805 PF01545 Cation efflux family GJQ55_RS06815 PF00176 SNF2 family N-terminal domain GJQ55_RS06815 PF00271 Helicase conserved C-terminal domain GJQ55_RS06815 PF18339 RapA N-terminal Tudor like domain 1 GJQ55_RS06815 PF18337 RapA N-terminal Tudor like domain GJQ55_RS06815 PF12137 RNA polymerase recycling family C-terminal GJQ55_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJQ55_RS06835 PF03934 Type II secretion system (T2SS), protein K GJQ55_RS06840 PF07963 Prokaryotic N-terminal methylation motif GJQ55_RS06840 PF11612 Type II secretion system (T2SS), protein J GJQ55_RS06845 PF07963 Prokaryotic N-terminal methylation motif GJQ55_RS06845 PF02501 Type II secretion system (T2SS), protein I GJQ55_RS06850 PF12019 Type II transport protein GspH GJQ55_RS06850 PF07963 Prokaryotic N-terminal methylation motif GJQ55_RS06855 PF07963 Prokaryotic N-terminal methylation motif GJQ55_RS06855 PF08334 Type II secretion system (T2SS), protein G GJQ55_RS06860 PF00482 Type II secretion system (T2SS), protein F GJQ55_RS06865 PF00437 Type II/IV secretion system protein GJQ55_RS06870 PF01012 Electron transfer flavoprotein domain GJQ55_RS06870 PF00766 Electron transfer flavoprotein FAD-binding domain GJQ55_RS06875 PF01012 Electron transfer flavoprotein domain GJQ55_RS06885 PF01521 Iron-sulphur cluster biosynthesis GJQ55_RS06885 PF01106 NifU-like domain GJQ55_RS06890 PF02310 B12 binding domain GJQ55_RS06890 PF02965 Vitamin B12 dependent methionine synthase, activation domain GJQ55_RS06890 PF02607 B12 binding domain GJQ55_RS06890 PF00809 Pterin binding enzyme GJQ55_RS06890 PF02574 Homocysteine S-methyltransferase GJQ55_RS06895 PF01554 MatE GJQ55_RS06900 PF03009 Glycerophosphoryl diester phosphodiesterase family GJQ55_RS06905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GJQ55_RS06905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GJQ55_RS06915 PF01343 Peptidase family S49 GJQ55_RS06915 PF08496 Peptidase family S49 N-terminal GJQ55_RS06925 PF04333 MlaA lipoprotein GJQ55_RS06930 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GJQ55_RS06930 PF11898 Domain of unknown function (DUF3418) GJQ55_RS06930 PF04408 Helicase associated domain (HA2) GJQ55_RS06930 PF00270 DEAD/DEAH box helicase GJQ55_RS06930 PF00271 Helicase conserved C-terminal domain GJQ55_RS06935 PF00501 AMP-binding enzyme GJQ55_RS06935 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS06940 PF12146 Serine aminopeptidase, S33 GJQ55_RS06945 PF01575 MaoC like domain GJQ55_RS07005 PF01434 Peptidase family M41 GJQ55_RS07005 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS07005 PF17862 AAA+ lid domain GJQ55_RS07025 PF03692 Putative zinc- or iron-chelating domain GJQ55_RS07030 PF05166 YcgL domain GJQ55_RS07035 PF01612 3'-5' exonuclease GJQ55_RS07035 PF00570 HRDC domain GJQ55_RS07040 PF02132 RecR protein GJQ55_RS07040 PF13662 Toprim domain GJQ55_RS07045 PF02575 YbaB/EbfC DNA-binding family GJQ55_RS07050 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GJQ55_RS07050 PF12170 DNA polymerase III tau subunit V interacting with alpha GJQ55_RS07050 PF12169 DNA polymerase III subunits gamma and tau domain III GJQ55_RS07065 PF13654 AAA domain GJQ55_RS07065 PF05362 Lon protease (S16) C-terminal proteolytic domain GJQ55_RS07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS07070 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS07070 PF01627 Hpt domain GJQ55_RS07070 PF00072 Response regulator receiver domain GJQ55_RS07095 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GJQ55_RS07105 PF01367 5'-3' exonuclease, C-terminal SAM fold GJQ55_RS07105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GJQ55_RS07110 PF00664 ABC transporter transmembrane region GJQ55_RS07110 PF00005 ABC transporter GJQ55_RS07125 PF00271 Helicase conserved C-terminal domain GJQ55_RS07125 PF00270 DEAD/DEAH box helicase GJQ55_RS07130 PF01554 MatE GJQ55_RS07135 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS07135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GJQ55_RS07140 PF00248 Aldo/keto reductase family GJQ55_RS07145 PF00085 Thioredoxin GJQ55_RS07155 PF11992 Domain of unknown function (DUF3488) GJQ55_RS07155 PF13559 Domain of unknown function (DUF4129) GJQ55_RS07155 PF01841 Transglutaminase-like superfamily GJQ55_RS07165 PF07726 ATPase family associated with various cellular activities (AAA) GJQ55_RS07165 PF17863 AAA lid domain GJQ55_RS07170 PF01053 Cys/Met metabolism PLP-dependent enzyme GJQ55_RS07175 PF00156 Phosphoribosyl transferase domain GJQ55_RS07180 PF02674 Colicin V production protein GJQ55_RS07190 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS07190 PF08245 Mur ligase middle domain GJQ55_RS07195 PF00290 Tryptophan synthase alpha chain GJQ55_RS07200 PF00291 Pyridoxal-phosphate dependent enzyme GJQ55_RS07205 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GJQ55_RS07210 PF01416 tRNA pseudouridine synthase GJQ55_RS07220 PF01118 Semialdehyde dehydrogenase, NAD binding domain GJQ55_RS07220 PF02774 Semialdehyde dehydrogenase, dimerisation domain GJQ55_RS07225 PF00180 Isocitrate/isopropylmalate dehydrogenase GJQ55_RS07230 PF00694 Aconitase C-terminal domain GJQ55_RS07235 PF00330 Aconitase family (aconitate hydratase) GJQ55_RS07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS07245 PF00582 Universal stress protein family GJQ55_RS07250 PF01515 Phosphate acetyl/butaryl transferase GJQ55_RS07265 PF05175 Methyltransferase small domain GJQ55_RS07280 PF01136 Peptidase family U32 GJQ55_RS07280 PF16325 Peptidase family U32 C-terminal domain GJQ55_RS07285 PF00849 RNA pseudouridylate synthase GJQ55_RS07300 PF00300 Histidine phosphatase superfamily (branch 1) GJQ55_RS07310 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GJQ55_RS07310 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GJQ55_RS07320 PF00072 Response regulator receiver domain GJQ55_RS07320 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS07330 PF03466 LysR substrate binding domain GJQ55_RS07335 PF00793 DAHP synthetase I family GJQ55_RS07340 PF03471 Transporter associated domain GJQ55_RS07340 PF00999 Sodium/hydrogen exchanger family GJQ55_RS07340 PF02080 TrkA-C domain GJQ55_RS07345 PF00072 Response regulator receiver domain GJQ55_RS07345 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS07375 PF00072 Response regulator receiver domain GJQ55_RS07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS07380 PF01047 MarR family GJQ55_RS07385 PF00255 Glutathione peroxidase GJQ55_RS07390 PF01641 SelR domain GJQ55_RS07395 PF00155 Aminotransferase class I and II GJQ55_RS07415 PF17845 FbpC C-terminal regulatory nucleotide binding domain GJQ55_RS07415 PF00005 ABC transporter GJQ55_RS07420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJQ55_RS07420 PF11890 Domain of unknown function (DUF3410) GJQ55_RS07420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJQ55_RS07425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GJQ55_RS07425 PF00384 Molybdopterin oxidoreductase GJQ55_RS07425 PF01568 Molydopterin dinucleotide binding domain GJQ55_RS07430 PF06434 Aconitate hydratase 2 N-terminus GJQ55_RS07430 PF00330 Aconitase family (aconitate hydratase) GJQ55_RS07430 PF11791 Aconitate B N-terminal domain GJQ55_RS07445 PF11638 DnaA N-terminal domain GJQ55_RS07445 PF00308 Bacterial dnaA protein GJQ55_RS07445 PF08299 Bacterial dnaA protein helix-turn-helix GJQ55_RS07450 PF00694 Aconitase C-terminal domain GJQ55_RS07450 PF00330 Aconitase family (aconitate hydratase) GJQ55_RS07455 PF11791 Aconitate B N-terminal domain GJQ55_RS07455 PF00330 Aconitase family (aconitate hydratase) GJQ55_RS07455 PF06434 Aconitate hydratase 2 N-terminus GJQ55_RS07460 PF01553 Acyltransferase GJQ55_RS07465 PF02938 GAD domain GJQ55_RS07465 PF00152 tRNA synthetases class II (D, K and N) GJQ55_RS07465 PF01336 OB-fold nucleic acid binding domain GJQ55_RS07475 PF16123 Hydroxyacylglutathione hydrolase C-terminus GJQ55_RS07475 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS07500 PF08443 RimK-like ATP-grasp domain GJQ55_RS07500 PF18030 RimK PreATP-grasp domain GJQ55_RS07510 PF00919 Uncharacterized protein family UPF0004 GJQ55_RS07510 PF04055 Radical SAM superfamily GJQ55_RS07510 PF18693 TRAM domain GJQ55_RS07515 PF00849 RNA pseudouridylate synthase GJQ55_RS07515 PF01479 S4 domain GJQ55_RS07520 PF00291 Pyridoxal-phosphate dependent enzyme GJQ55_RS07525 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS07525 PF05362 Lon protease (S16) C-terminal proteolytic domain GJQ55_RS07525 PF02190 ATP-dependent protease La (LON) substrate-binding domain GJQ55_RS07530 PF00857 Isochorismatase family GJQ55_RS07535 PF04261 Dyp-type peroxidase family GJQ55_RS07540 PF05971 RNA methyltransferase GJQ55_RS07545 PF12833 Helix-turn-helix domain GJQ55_RS07545 PF01965 DJ-1/PfpI family GJQ55_RS07550 PF06167 Glucose-regulated metallo-peptidase M90 GJQ55_RS07555 PF02801 Beta-ketoacyl synthase, C-terminal domain GJQ55_RS07555 PF00109 Beta-ketoacyl synthase, N-terminal domain GJQ55_RS07570 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system GJQ55_RS07585 PF18766 SWI2/SNF2 ATPase GJQ55_RS07585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GJQ55_RS07585 PF11867 Domain of unknown function (DUF3387) GJQ55_RS07610 PF12161 HsdM N-terminal domain GJQ55_RS07610 PF02384 N-6 DNA Methylase GJQ55_RS07615 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS07615 PF00258 Flavodoxin GJQ55_RS07615 PF00667 FAD binding domain GJQ55_RS07635 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS07635 PF00593 TonB dependent receptor GJQ55_RS07645 PF00115 Cytochrome C and Quinol oxidase polypeptide I GJQ55_RS07660 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GJQ55_RS07660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJQ55_RS07665 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GJQ55_RS07665 PF13746 4Fe-4S dicluster domain GJQ55_RS07665 PF12801 4Fe-4S binding domain GJQ55_RS07675 PF00403 Heavy-metal-associated domain GJQ55_RS07690 PF00027 Cyclic nucleotide-binding domain GJQ55_RS07690 PF00325 Bacterial regulatory proteins, crp family GJQ55_RS07695 PF01171 PP-loop family GJQ55_RS07705 PF01272 Transcription elongation factor, GreA/GreB, C-term GJQ55_RS07705 PF03449 Transcription elongation factor, N-terminal GJQ55_RS07710 PF00226 DnaJ domain GJQ55_RS07710 PF01556 DnaJ C terminal domain GJQ55_RS07710 PF00684 DnaJ central domain GJQ55_RS07730 PF00691 OmpA family GJQ55_RS07740 PF01722 BolA-like protein GJQ55_RS07755 PF01926 50S ribosome-binding GTPase GJQ55_RS07765 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS07770 PF01022 Bacterial regulatory protein, arsR family GJQ55_RS07775 PF00916 Sulfate permease family GJQ55_RS07775 PF01740 STAS domain GJQ55_RS07800 PF03976 Polyphosphate kinase 2 (PPK2) GJQ55_RS07805 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS07805 PF07694 5TMR of 5TMR-LYT GJQ55_RS07810 PF01177 Asp/Glu/Hydantoin racemase GJQ55_RS07815 PF01227 GTP cyclohydrolase I GJQ55_RS07820 PF13091 PLD-like domain GJQ55_RS07820 PF13396 Phospholipase_D-nuclease N-terminal GJQ55_RS07825 PF03922 OmpW family GJQ55_RS07835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS07835 PF12806 Acetyl-CoA dehydrogenase C-terminal like GJQ55_RS07835 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS07835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS07840 PF08803 Putative mono-oxygenase ydhR GJQ55_RS07845 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS07845 PF00501 AMP-binding enzyme GJQ55_RS07850 PF00487 Fatty acid desaturase GJQ55_RS07860 PF01717 Cobalamin-independent synthase, Catalytic domain GJQ55_RS07860 PF08267 Cobalamin-independent synthase, N-terminal domain GJQ55_RS07880 PF13411 MerR HTH family regulatory protein GJQ55_RS07885 PF00360 Phytochrome region GJQ55_RS07885 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS07885 PF01590 GAF domain GJQ55_RS07885 PF00563 EAL domain GJQ55_RS07890 PF02222 ATP-grasp domain GJQ55_RS07900 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS07905 PF00293 NUDIX domain GJQ55_RS07910 PF01784 NIF3 (NGG1p interacting factor 3) GJQ55_RS07915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS07915 PF02743 Cache domain GJQ55_RS07915 PF00672 HAMP domain GJQ55_RS07920 PF03692 Putative zinc- or iron-chelating domain GJQ55_RS07935 PF00849 RNA pseudouridylate synthase GJQ55_RS07945 PF00873 AcrB/AcrD/AcrF family GJQ55_RS07950 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS07950 PF02743 Cache domain GJQ55_RS07955 PF00873 AcrB/AcrD/AcrF family GJQ55_RS07965 PF02321 Outer membrane efflux protein GJQ55_RS07970 PF00156 Phosphoribosyl transferase domain GJQ55_RS07975 PF01546 Peptidase family M20/M25/M40 GJQ55_RS07975 PF07687 Peptidase dimerisation domain GJQ55_RS07980 PF13847 Methyltransferase domain GJQ55_RS07995 PF08264 Anticodon-binding domain of tRNA GJQ55_RS07995 PF00133 tRNA synthetases class I (I, L, M and V) GJQ55_RS07995 PF10458 Valyl tRNA synthetase tRNA binding arm GJQ55_RS08020 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase GJQ55_RS08085 PF04101 Glycosyltransferase family 28 C-terminal domain GJQ55_RS08120 PF13495 Phage integrase, N-terminal SAM-like domain GJQ55_RS08120 PF00589 Phage integrase family GJQ55_RS08125 PF00133 tRNA synthetases class I (I, L, M and V) GJQ55_RS08125 PF08264 Anticodon-binding domain of tRNA GJQ55_RS08125 PF10458 Valyl tRNA synthetase tRNA binding arm GJQ55_RS08130 PF00588 SpoU rRNA Methylase family GJQ55_RS08140 PF00141 Peroxidase GJQ55_RS08145 PF00893 Small Multidrug Resistance protein GJQ55_RS08150 PF00255 Glutathione peroxidase GJQ55_RS08165 PF01027 Inhibitor of apoptosis-promoting Bax1 GJQ55_RS08175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GJQ55_RS08180 PF07549 SecD/SecF GG Motif GJQ55_RS08180 PF02355 Protein export membrane protein GJQ55_RS08185 PF07549 SecD/SecF GG Motif GJQ55_RS08185 PF13721 SecD export protein N-terminal TM region GJQ55_RS08185 PF02355 Protein export membrane protein GJQ55_RS08190 PF02699 Preprotein translocase subunit GJQ55_RS08195 PF01702 Queuine tRNA-ribosyltransferase GJQ55_RS08200 PF02547 Queuosine biosynthesis protein GJQ55_RS08225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS08230 PF00563 EAL domain GJQ55_RS08230 PF01590 GAF domain GJQ55_RS08230 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS08230 PF00360 Phytochrome region GJQ55_RS08235 PF00578 AhpC/TSA family GJQ55_RS08240 PF00106 short chain dehydrogenase GJQ55_RS08245 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS08250 PF03969 AFG1-like ATPase GJQ55_RS08255 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GJQ55_RS08260 PF01507 Phosphoadenosine phosphosulfate reductase family GJQ55_RS08265 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS08275 PF03881 Fructosamine kinase GJQ55_RS08280 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GJQ55_RS08280 PF01243 Pyridoxamine 5'-phosphate oxidase GJQ55_RS08290 PF03739 Lipopolysaccharide export system permease LptF/LptG GJQ55_RS08295 PF03739 Lipopolysaccharide export system permease LptF/LptG GJQ55_RS08300 PF00883 Cytosol aminopeptidase family, catalytic domain GJQ55_RS08300 PF02789 Cytosol aminopeptidase family, N-terminal domain GJQ55_RS08305 PF00881 Nitroreductase family GJQ55_RS08310 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS08310 PF00072 Response regulator receiver domain GJQ55_RS08320 PF00106 short chain dehydrogenase GJQ55_RS08330 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS08330 PF00970 Oxidoreductase FAD-binding domain GJQ55_RS08330 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS08335 PF02508 Rnf-Nqr subunit, membrane protein GJQ55_RS08340 PF02508 Rnf-Nqr subunit, membrane protein GJQ55_RS08345 PF04205 FMN-binding domain GJQ55_RS08350 PF03116 NQR2, RnfD, RnfE family GJQ55_RS08355 PF11973 NQRA C-terminal domain GJQ55_RS08355 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GJQ55_RS08360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GJQ55_RS08360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GJQ55_RS08365 PF02559 CarD-like/TRCF domain GJQ55_RS08365 PF00270 DEAD/DEAH box helicase GJQ55_RS08365 PF00271 Helicase conserved C-terminal domain GJQ55_RS08365 PF03461 TRCF domain GJQ55_RS08365 PF17757 UvrB interaction domain GJQ55_RS08375 PF01048 Phosphorylase superfamily GJQ55_RS08380 PF00933 Glycosyl hydrolase family 3 N terminal domain GJQ55_RS08390 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS08395 PF01726 LexA DNA binding domain GJQ55_RS08395 PF00717 Peptidase S24-like GJQ55_RS08400 PF03846 Cell division inhibitor SulA GJQ55_RS08420 PF00183 Hsp90 protein GJQ55_RS08425 PF02581 Thiamine monophosphate synthase GJQ55_RS08430 PF05690 Thiazole biosynthesis protein ThiG GJQ55_RS08440 PF01266 FAD dependent oxidoreductase GJQ55_RS08445 PF13667 ThiC-associated domain GJQ55_RS08445 PF01964 Radical SAM ThiC family GJQ55_RS08465 PF00072 Response regulator receiver domain GJQ55_RS08480 PF02311 AraC-like ligand binding domain GJQ55_RS08480 PF12833 Helix-turn-helix domain GJQ55_RS08485 PF01081 KDPG and KHG aldolase GJQ55_RS08490 PF00920 Dehydratase family GJQ55_RS08495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GJQ55_RS08500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GJQ55_RS08500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GJQ55_RS08510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS08510 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GJQ55_RS08530 PF01259 SAICAR synthetase GJQ55_RS08535 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS08535 PF10996 Beta-Casp domain GJQ55_RS08535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJQ55_RS08545 PF00701 Dihydrodipicolinate synthetase family GJQ55_RS08550 PF01594 AI-2E family transporter GJQ55_RS08555 PF01206 Sulfurtransferase TusA GJQ55_RS08560 PF01435 Peptidase family M48 GJQ55_RS08560 PF07720 Tetratricopeptide repeat GJQ55_RS08565 PF02445 Quinolinate synthetase A protein GJQ55_RS08580 PF16331 TolA binding protein trimerisation GJQ55_RS08580 PF13525 Outer membrane lipoprotein GJQ55_RS08585 PF00691 OmpA family GJQ55_RS08590 PF04052 TolB amino-terminal domain GJQ55_RS08590 PF07676 WD40-like Beta Propeller Repeat GJQ55_RS08600 PF02472 Biopolymer transport protein ExbD/TolR GJQ55_RS08605 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS08610 PF03061 Thioesterase superfamily GJQ55_RS08615 PF17864 RuvB AAA lid domain GJQ55_RS08615 PF05491 RuvB C-terminal winged helix domain GJQ55_RS08615 PF05496 Holliday junction DNA helicase RuvB P-loop domain GJQ55_RS08620 PF07499 RuvA, C-terminal domain GJQ55_RS08620 PF01330 RuvA N terminal domain GJQ55_RS08625 PF02075 Crossover junction endodeoxyribonuclease RuvC GJQ55_RS08635 PF10431 C-terminal, D2-small domain, of ClpB protein GJQ55_RS08635 PF02861 Clp amino terminal domain, pathogenicity island component GJQ55_RS08635 PF07724 AAA domain (Cdc48 subfamily) GJQ55_RS08635 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS08635 PF17871 AAA lid domain GJQ55_RS08645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS08645 PF03466 LysR substrate binding domain GJQ55_RS08655 PF11818 C-terminal domain of tail specific protease (DUF3340) GJQ55_RS08655 PF00595 PDZ domain GJQ55_RS08655 PF03572 Peptidase family S41 GJQ55_RS08655 PF17804 Tail specific protease N-terminal domain GJQ55_RS08660 PF01206 Sulfurtransferase TusA GJQ55_RS08665 PF00108 Thiolase, N-terminal domain GJQ55_RS08665 PF02803 Thiolase, C-terminal domain GJQ55_RS08675 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS08675 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS08675 PF00563 EAL domain GJQ55_RS08695 PF04408 Helicase associated domain (HA2) GJQ55_RS08695 PF00271 Helicase conserved C-terminal domain GJQ55_RS08695 PF08482 ATP-dependent helicase C-terminal GJQ55_RS08695 PF00270 DEAD/DEAH box helicase GJQ55_RS08710 PF00677 Lumazine binding domain GJQ55_RS08715 PF01734 Patatin-like phospholipase GJQ55_RS08735 PF00873 AcrB/AcrD/AcrF family GJQ55_RS08740 PF01170 Putative RNA methylase family UPF0020 GJQ55_RS08740 PF02926 THUMP domain GJQ55_RS08740 PF10672 S-adenosylmethionine-dependent methyltransferase GJQ55_RS08745 PF04957 Ribosome modulation factor GJQ55_RS08750 PF01180 Dihydroorotate dehydrogenase GJQ55_RS08760 PF05088 Bacterial NAD-glutamate dehydrogenase GJQ55_RS08765 PF07726 ATPase family associated with various cellular activities (AAA) GJQ55_RS08765 PF17863 AAA lid domain GJQ55_RS08770 PF01882 Protein of unknown function DUF58 GJQ55_RS08780 PF00092 von Willebrand factor type A domain GJQ55_RS08780 PF07584 Aerotolerance regulator N-terminal GJQ55_RS08785 PF13519 von Willebrand factor type A domain GJQ55_RS08795 PF00034 Cytochrome c GJQ55_RS08795 PF03150 Di-haem cytochrome c peroxidase GJQ55_RS08800 PF12826 Helix-hairpin-helix motif GJQ55_RS08800 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GJQ55_RS08800 PF00533 BRCA1 C Terminus (BRCT) domain GJQ55_RS08800 PF01653 NAD-dependent DNA ligase adenylation domain GJQ55_RS08800 PF03120 NAD-dependent DNA ligase OB-fold domain GJQ55_RS08805 PF04354 ZipA, C-terminal FtsZ-binding domain GJQ55_RS08805 PF04354 ZipA, C-terminal FtsZ-binding domain GJQ55_RS08810 PF02463 RecF/RecN/SMC N terminal domain GJQ55_RS08820 PF00487 Fatty acid desaturase GJQ55_RS08825 PF03458 UPF0126 domain GJQ55_RS08830 PF08447 PAS fold GJQ55_RS08830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS08835 PF00756 Putative esterase GJQ55_RS08840 PF00107 Zinc-binding dehydrogenase GJQ55_RS08840 PF08240 Alcohol dehydrogenase GroES-like domain GJQ55_RS08845 PF00108 Thiolase, N-terminal domain GJQ55_RS08845 PF02803 Thiolase, C-terminal domain GJQ55_RS08850 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS08850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GJQ55_RS08850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GJQ55_RS08865 PF16326 ABC transporter C-terminal domain GJQ55_RS08865 PF12848 ABC transporter GJQ55_RS08865 PF00005 ABC transporter GJQ55_RS08870 PF00529 HlyD membrane-fusion protein of T1SS GJQ55_RS08870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJQ55_RS08875 PF00873 AcrB/AcrD/AcrF family GJQ55_RS08910 PF12833 Helix-turn-helix domain GJQ55_RS08910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJQ55_RS08930 PF07044 Protein of unknown function (DUF1329) GJQ55_RS08935 PF11940 Domain of unknown function (DUF3458) Ig-like fold GJQ55_RS08935 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GJQ55_RS08935 PF01433 Peptidase family M1 domain GJQ55_RS08950 PF01694 Rhomboid family GJQ55_RS08950 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GJQ55_RS08955 PF00149 Calcineurin-like phosphoesterase GJQ55_RS08960 PF01513 ATP-NAD kinase GJQ55_RS08975 PF01396 Topoisomerase DNA binding C4 zinc finger GJQ55_RS08975 PF01751 Toprim domain GJQ55_RS08975 PF01131 DNA topoisomerase GJQ55_RS08975 PF08272 Topoisomerase I zinc-ribbon-like GJQ55_RS09000 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJQ55_RS09000 PF12833 Helix-turn-helix domain GJQ55_RS09015 PF12833 Helix-turn-helix domain GJQ55_RS09020 PF00561 alpha/beta hydrolase fold GJQ55_RS09030 PF10502 Signal peptidase, peptidase S26 GJQ55_RS09040 PF01966 HD domain GJQ55_RS09045 PF01914 MarC family integral membrane protein GJQ55_RS09060 PF00474 Sodium:solute symporter family GJQ55_RS09080 PF00672 HAMP domain GJQ55_RS09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS09080 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS09080 PF01627 Hpt domain GJQ55_RS09080 PF00072 Response regulator receiver domain GJQ55_RS09085 PF00072 Response regulator receiver domain GJQ55_RS09085 PF00196 Bacterial regulatory proteins, luxR family GJQ55_RS09090 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS09090 PF16177 Acetyl-coenzyme A synthetase N-terminus GJQ55_RS09090 PF00501 AMP-binding enzyme GJQ55_RS09110 PF03918 Cytochrome C biogenesis protein GJQ55_RS09115 PF08534 Redoxin GJQ55_RS09120 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GJQ55_RS09120 PF01578 Cytochrome C assembly protein GJQ55_RS09125 PF03100 CcmE GJQ55_RS09130 PF04995 Heme exporter protein D (CcmD) GJQ55_RS09135 PF01578 Cytochrome C assembly protein GJQ55_RS09140 PF03379 CcmB protein GJQ55_RS09145 PF00005 ABC transporter GJQ55_RS09155 PF01312 FlhB HrpN YscU SpaS Family GJQ55_RS09165 PF02308 MgtC family GJQ55_RS09170 PF01979 Amidohydrolase family GJQ55_RS09180 PF13419 Haloacid dehalogenase-like hydrolase GJQ55_RS09185 PF00106 short chain dehydrogenase GJQ55_RS09190 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS09195 PF00849 RNA pseudouridylate synthase GJQ55_RS09195 PF01479 S4 domain GJQ55_RS09200 PF04079 Segregation and condensation complex subunit ScpB GJQ55_RS09205 PF02616 Segregation and condensation protein ScpA GJQ55_RS09210 PF00579 tRNA synthetases class I (W and Y) GJQ55_RS09215 PF01300 Telomere recombination GJQ55_RS09220 PF02811 PHP domain GJQ55_RS09225 PF03795 YCII-related domain GJQ55_RS09235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GJQ55_RS09245 PF01266 FAD dependent oxidoreductase GJQ55_RS09245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GJQ55_RS09255 PF06794 Uncharacterised protein family (UPF0270) GJQ55_RS09265 PF00487 Fatty acid desaturase GJQ55_RS09270 PF00970 Oxidoreductase FAD-binding domain GJQ55_RS09270 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS09270 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS09275 PF00463 Isocitrate lyase family GJQ55_RS09290 PF01351 Ribonuclease HII GJQ55_RS09295 PF02684 Lipid-A-disaccharide synthetase GJQ55_RS09300 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GJQ55_RS09300 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS09305 PF07977 FabA-like domain GJQ55_RS09310 PF00132 Bacterial transferase hexapeptide (six repeats) GJQ55_RS09310 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GJQ55_RS09315 PF03938 Outer membrane protein (OmpH-like) GJQ55_RS09320 PF01103 Surface antigen GJQ55_RS09320 PF07244 Surface antigen variable number repeat GJQ55_RS09325 PF17820 PDZ domain GJQ55_RS09325 PF13180 PDZ domain GJQ55_RS09325 PF02163 Peptidase family M50 GJQ55_RS09330 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GJQ55_RS09330 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GJQ55_RS09330 PF13288 DXP reductoisomerase C-terminal domain GJQ55_RS09340 PF01255 Putative undecaprenyl diphosphate synthase GJQ55_RS09345 PF01765 Ribosome recycling factor GJQ55_RS09350 PF00696 Amino acid kinase family GJQ55_RS09355 PF00889 Elongation factor TS GJQ55_RS09360 PF00318 Ribosomal protein S2 GJQ55_RS09365 PF00557 Metallopeptidase family M24 GJQ55_RS09370 PF08335 GlnD PII-uridylyltransferase GJQ55_RS09370 PF01966 HD domain GJQ55_RS09370 PF01909 Nucleotidyltransferase domain GJQ55_RS09370 PF01842 ACT domain GJQ55_RS09375 PF02678 Pirin GJQ55_RS09375 PF05726 Pirin C-terminal cupin domain GJQ55_RS09380 PF00271 Helicase conserved C-terminal domain GJQ55_RS09380 PF00270 DEAD/DEAH box helicase GJQ55_RS09400 PF06508 Queuosine biosynthesis protein QueC GJQ55_RS09410 PF14765 Polyketide synthase dehydratase GJQ55_RS09410 PF00550 Phosphopantetheine attachment site GJQ55_RS09410 PF08659 KR domain GJQ55_RS09410 PF02801 Beta-ketoacyl synthase, C-terminal domain GJQ55_RS09410 PF00698 Acyl transferase domain GJQ55_RS09410 PF08240 Alcohol dehydrogenase GroES-like domain GJQ55_RS09410 PF16197 Ketoacyl-synthetase C-terminal extension GJQ55_RS09410 PF00109 Beta-ketoacyl synthase, N-terminal domain GJQ55_RS09415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS09415 PF03466 LysR substrate binding domain GJQ55_RS09420 PF04219 Protein of unknown function, DUF GJQ55_RS09425 PF18030 RimK PreATP-grasp domain GJQ55_RS09425 PF08443 RimK-like ATP-grasp domain GJQ55_RS09430 PF00202 Aminotransferase class-III GJQ55_RS09435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GJQ55_RS09435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GJQ55_RS09440 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS09445 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GJQ55_RS09445 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GJQ55_RS09450 PF03466 LysR substrate binding domain GJQ55_RS09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS09455 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS09455 PF00672 HAMP domain GJQ55_RS09460 PF00072 Response regulator receiver domain GJQ55_RS09460 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS09465 PF03477 ATP cone domain GJQ55_RS09465 PF02867 Ribonucleotide reductase, barrel domain GJQ55_RS09465 PF00317 Ribonucleotide reductase, all-alpha domain GJQ55_RS09470 PF00268 Ribonucleotide reductase, small chain GJQ55_RS09475 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS09485 PF00578 AhpC/TSA family GJQ55_RS09495 PF12833 Helix-turn-helix domain GJQ55_RS09495 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJQ55_RS09515 PF01584 CheW-like domain GJQ55_RS09525 PF13614 AAA domain GJQ55_RS09530 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJQ55_RS09530 PF00691 OmpA family GJQ55_RS09535 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS09540 PF00072 Response regulator receiver domain GJQ55_RS09540 PF01339 CheB methylesterase GJQ55_RS09545 PF01584 CheW-like domain GJQ55_RS09545 PF01627 Hpt domain GJQ55_RS09545 PF02895 Signal transducing histidine kinase, homodimeric domain GJQ55_RS09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS09545 PF00072 Response regulator receiver domain GJQ55_RS09550 PF04344 Chemotaxis phosphatase, CheZ GJQ55_RS09555 PF00072 Response regulator receiver domain GJQ55_RS09560 PF04539 Sigma-70 region 3 GJQ55_RS09560 PF04545 Sigma-70, region 4 GJQ55_RS09560 PF04542 Sigma-70 region 2 GJQ55_RS09565 PF10609 NUBPL iron-transfer P-loop NTPase GJQ55_RS09570 PF00448 SRP54-type protein, GTPase domain GJQ55_RS09575 PF00771 FHIPEP family GJQ55_RS09580 PF01312 FlhB HrpN YscU SpaS Family GJQ55_RS09585 PF01311 Bacterial export proteins, family 1 GJQ55_RS09590 PF01313 Bacterial export proteins, family 3 GJQ55_RS09595 PF00813 FliP family GJQ55_RS09605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GJQ55_RS09610 PF02154 Flagellar motor switch protein FliM GJQ55_RS09610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GJQ55_RS09635 PF18269 T3SS EscN ATPase C-terminal domain GJQ55_RS09635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJQ55_RS09645 PF14842 FliG N-terminal domain GJQ55_RS09645 PF14841 FliG middle domain GJQ55_RS09645 PF01706 FliG C-terminal domain GJQ55_RS09650 PF08345 Flagellar M-ring protein C-terminal GJQ55_RS09650 PF01514 Secretory protein of YscJ/FliF family GJQ55_RS09655 PF02049 Flagellar hook-basal body complex protein FliE GJQ55_RS09660 PF00072 Response regulator receiver domain GJQ55_RS09660 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS09660 PF00158 Sigma-54 interaction domain GJQ55_RS09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS09665 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS09665 PF13188 PAS domain GJQ55_RS09670 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS09670 PF06490 Flagellar regulatory protein FleQ GJQ55_RS09670 PF00158 Sigma-54 interaction domain GJQ55_RS09675 PF02561 Flagellar protein FliS GJQ55_RS09685 PF03167 Uracil DNA glycosylase superfamily GJQ55_RS09690 PF00152 tRNA synthetases class II (D, K and N) GJQ55_RS09690 PF01336 OB-fold nucleic acid binding domain GJQ55_RS09710 PF07195 Flagellar hook-associated protein 2 C-terminus GJQ55_RS09710 PF07196 Flagellin hook IN motif GJQ55_RS09710 PF02465 Flagellar hook-associated protein 2 N-terminus GJQ55_RS09715 PF03646 FlaG protein GJQ55_RS09720 PF00700 Bacterial flagellin C-terminal helical region GJQ55_RS09720 PF00700 Bacterial flagellin C-terminal helical region GJQ55_RS09720 PF00669 Bacterial flagellin N-terminal helical region GJQ55_RS09720 PF00669 Bacterial flagellin N-terminal helical region GJQ55_RS09735 PF00669 Bacterial flagellin N-terminal helical region GJQ55_RS09745 PF10135 Rod binding protein GJQ55_RS09745 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GJQ55_RS09755 PF02119 Flagellar P-ring protein GJQ55_RS09760 PF02107 Flagellar L-ring protein GJQ55_RS09765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJQ55_RS09765 PF00460 Flagella basal body rod protein GJQ55_RS09770 PF00460 Flagella basal body rod protein GJQ55_RS09770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJQ55_RS09775 PF07559 Flagellar basal body protein FlaE GJQ55_RS09775 PF00460 Flagella basal body rod protein GJQ55_RS09775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJQ55_RS09780 PF13861 FlgD Tudor-like domain GJQ55_RS09780 PF03963 Flagellar hook capping protein - N-terminal region GJQ55_RS09780 PF13860 FlgD Ig-like domain GJQ55_RS09785 PF00460 Flagella basal body rod protein GJQ55_RS09785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJQ55_RS09790 PF00460 Flagella basal body rod protein GJQ55_RS09795 PF01739 CheR methyltransferase, SAM binding domain GJQ55_RS09795 PF03705 CheR methyltransferase, all-alpha domain GJQ55_RS09800 PF00072 Response regulator receiver domain GJQ55_RS09800 PF01584 CheW-like domain GJQ55_RS09820 PF07238 PilZ domain GJQ55_RS09820 PF07317 Flagellar regulator YcgR GJQ55_RS09845 PF01906 Putative heavy-metal-binding GJQ55_RS09850 PF01906 Putative heavy-metal-binding GJQ55_RS09855 PF13181 Tetratricopeptide repeat GJQ55_RS09855 PF01435 Peptidase family M48 GJQ55_RS09860 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS09885 PF02562 PhoH-like protein GJQ55_RS09885 PF13638 PIN domain GJQ55_RS09895 PF03641 Possible lysine decarboxylase GJQ55_RS09900 PF00849 RNA pseudouridylate synthase GJQ55_RS09905 PF10411 Disulfide bond isomerase protein N-terminus GJQ55_RS09905 PF13098 Thioredoxin-like domain GJQ55_RS09910 PF01245 Ribosomal protein L19 GJQ55_RS09915 PF01746 tRNA (Guanine-1)-methyltransferase GJQ55_RS09920 PF05239 PRC-barrel domain GJQ55_RS09920 PF01782 RimM N-terminal domain GJQ55_RS09925 PF00886 Ribosomal protein S16 GJQ55_RS09930 PF02690 Na+/Pi-cotransporter GJQ55_RS09935 PF00437 Type II/IV secretion system protein GJQ55_RS09970 PF02769 AIR synthase related protein, C-terminal domain GJQ55_RS09970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GJQ55_RS09970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GJQ55_RS09975 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJQ55_RS09975 PF01464 Transglycosylase SLT domain GJQ55_RS09980 PF14437 MafB19-like deaminase GJQ55_RS09990 PF01253 Translation initiation factor SUI1 GJQ55_RS09995 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS09995 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJQ55_RS10000 PF01037 Lrp/AsnC ligand binding domain GJQ55_RS10005 PF08502 LeuA allosteric (dimerisation) domain GJQ55_RS10005 PF00682 HMGL-like GJQ55_RS10010 PF13361 UvrD-like helicase C-terminal domain GJQ55_RS10010 PF00580 UvrD/REP helicase N-terminal domain GJQ55_RS10020 PF02798 Glutathione S-transferase, N-terminal domain GJQ55_RS10025 PF00271 Helicase conserved C-terminal domain GJQ55_RS10025 PF00270 DEAD/DEAH box helicase GJQ55_RS10025 PF03880 DbpA RNA binding domain GJQ55_RS10025 PF12343 Cold shock protein DEAD box A GJQ55_RS10030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS10030 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJQ55_RS10030 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS10035 PF06865 Pyrimidine/purine nucleoside phosphorylase GJQ55_RS10045 PF12843 Putative quorum-sensing-regulated virulence factor GJQ55_RS10050 PF02540 NAD synthase GJQ55_RS10050 PF00117 Glutamine amidotransferase class-I GJQ55_RS10050 PF00958 GMP synthase C terminal domain GJQ55_RS10065 PF00860 Permease family GJQ55_RS10085 PF04445 Putative SAM-dependent methyltransferase GJQ55_RS10090 PF02673 Bacitracin resistance protein BacA GJQ55_RS10095 PF00814 Glycoprotease family GJQ55_RS10105 PF05191 Adenylate kinase, active site lid GJQ55_RS10110 PF00311 Phosphoenolpyruvate carboxylase GJQ55_RS10115 PF03819 MazG nucleotide pyrophosphohydrolase domain GJQ55_RS10120 PF13291 ACT domain GJQ55_RS10120 PF04607 Region found in RelA / SpoT proteins GJQ55_RS10120 PF02824 TGS domain GJQ55_RS10125 PF01938 TRAM domain GJQ55_RS10125 PF05958 tRNA (Uracil-5-)-methyltransferase GJQ55_RS10130 PF00291 Pyridoxal-phosphate dependent enzyme GJQ55_RS10135 PF01627 Hpt domain GJQ55_RS10135 PF00072 Response regulator receiver domain GJQ55_RS10135 PF00672 HAMP domain GJQ55_RS10135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GJQ55_RS10135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS10135 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS10140 PF01648 4'-phosphopantetheinyl transferase superfamily GJQ55_RS10145 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GJQ55_RS10150 PF11967 Recombination protein O N terminal GJQ55_RS10150 PF02565 Recombination protein O C terminal GJQ55_RS10155 PF01926 50S ribosome-binding GTPase GJQ55_RS10155 PF07650 KH domain GJQ55_RS10160 PF14622 Ribonuclease-III-like GJQ55_RS10160 PF00035 Double-stranded RNA binding motif GJQ55_RS10170 PF06421 GTP-binding protein LepA C-terminus GJQ55_RS10170 PF03144 Elongation factor Tu domain 2 GJQ55_RS10170 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS10170 PF00679 Elongation factor G C-terminus GJQ55_RS10175 PF13180 PDZ domain GJQ55_RS10185 PF17188 MucB/RseB C-terminal domain GJQ55_RS10185 PF03888 MucB/RseB N-terminal domain GJQ55_RS10190 PF03873 Anti sigma-E protein RseA, C-terminal domain GJQ55_RS10190 PF03872 Anti sigma-E protein RseA, N-terminal domain GJQ55_RS10195 PF08281 Sigma-70, region 4 GJQ55_RS10195 PF04542 Sigma-70 region 2 GJQ55_RS10200 PF02910 Fumarate reductase flavoprotein C-term GJQ55_RS10200 PF00890 FAD binding domain GJQ55_RS10210 PF03937 Flavinator of succinate dehydrogenase GJQ55_RS10215 PF01571 Aminomethyltransferase folate-binding domain GJQ55_RS10225 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS10235 PF00561 alpha/beta hydrolase fold GJQ55_RS10245 PF12848 ABC transporter GJQ55_RS10245 PF00005 ABC transporter GJQ55_RS10250 PF00027 Cyclic nucleotide-binding domain GJQ55_RS10250 PF13545 Crp-like helix-turn-helix domain GJQ55_RS10255 PF03600 Citrate transporter GJQ55_RS10265 PF01171 PP-loop family GJQ55_RS10265 PF09179 TilS substrate binding domain GJQ55_RS10265 PF11734 TilS substrate C-terminal domain GJQ55_RS10270 PF01336 OB-fold nucleic acid binding domain GJQ55_RS10270 PF02811 PHP domain GJQ55_RS10270 PF14579 Helix-hairpin-helix motif GJQ55_RS10270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GJQ55_RS10270 PF07733 Bacterial DNA polymerase III alpha NTPase domain GJQ55_RS10275 PF18030 RimK PreATP-grasp domain GJQ55_RS10275 PF08443 RimK-like ATP-grasp domain GJQ55_RS10285 PF01026 TatD related DNase GJQ55_RS10290 PF00885 6,7-dimethyl-8-ribityllumazine synthase GJQ55_RS10295 PF00270 DEAD/DEAH box helicase GJQ55_RS10295 PF00271 Helicase conserved C-terminal domain GJQ55_RS10305 PF01464 Transglycosylase SLT domain GJQ55_RS10305 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJQ55_RS10350 PF00118 TCP-1/cpn60 chaperonin family GJQ55_RS10355 PF00166 Chaperonin 10 Kd subunit GJQ55_RS10370 PF01029 NusB family GJQ55_RS10370 PF01189 16S rRNA methyltransferase RsmB/F GJQ55_RS10375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GJQ55_RS10375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GJQ55_RS10380 PF00005 ABC transporter GJQ55_RS10380 PF00664 ABC transporter transmembrane region GJQ55_RS10385 PF14760 Rnk N-terminus GJQ55_RS10385 PF01272 Transcription elongation factor, GreA/GreB, C-term GJQ55_RS10395 PF01694 Rhomboid family GJQ55_RS10400 PF00378 Enoyl-CoA hydratase/isomerase GJQ55_RS10405 PF00762 Ferrochelatase GJQ55_RS10410 PF07690 Major Facilitator Superfamily GJQ55_RS10415 PF16295 Tetracyclin repressor-like, C-terminal domain GJQ55_RS10415 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS10435 PF00919 Uncharacterized protein family UPF0004 GJQ55_RS10435 PF01938 TRAM domain GJQ55_RS10435 PF04055 Radical SAM superfamily GJQ55_RS10440 PF02562 PhoH-like protein GJQ55_RS10445 PF02130 Uncharacterized protein family UPF0054 GJQ55_RS10450 PF00571 CBS domain GJQ55_RS10450 PF03471 Transporter associated domain GJQ55_RS10455 PF00795 Carbon-nitrogen hydrolase GJQ55_RS10465 PF00293 NUDIX domain GJQ55_RS10470 PF01960 ArgJ family GJQ55_RS10475 PF02810 SEC-C motif GJQ55_RS10475 PF07517 SecA DEAD-like domain GJQ55_RS10475 PF01043 SecA preprotein cross-linking domain GJQ55_RS10475 PF07516 SecA Wing and Scaffold domain GJQ55_RS10480 PF01551 Peptidase family M23 GJQ55_RS10480 PF01476 LysM domain GJQ55_RS10480 PF08525 Opacity-associated protein A N-terminal motif GJQ55_RS10485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GJQ55_RS10490 PF12327 FtsZ family, C-terminal domain GJQ55_RS10490 PF00091 Tubulin/FtsZ family, GTPase domain GJQ55_RS10495 PF02491 SHS2 domain inserted in FTSA GJQ55_RS10500 PF03799 Cell division protein FtsQ GJQ55_RS10500 PF08478 POTRA domain, FtsQ-type GJQ55_RS10505 PF07478 D-ala D-ala ligase C-terminus GJQ55_RS10505 PF01820 D-ala D-ala ligase N-terminus GJQ55_RS10510 PF01225 Mur ligase family, catalytic domain GJQ55_RS10510 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS10510 PF08245 Mur ligase middle domain GJQ55_RS10515 PF04101 Glycosyltransferase family 28 C-terminal domain GJQ55_RS10515 PF03033 Glycosyltransferase family 28 N-terminal domain GJQ55_RS10520 PF01098 Cell cycle protein GJQ55_RS10525 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS10525 PF08245 Mur ligase middle domain GJQ55_RS10530 PF00953 Glycosyl transferase family 4 GJQ55_RS10530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GJQ55_RS10535 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS10535 PF01225 Mur ligase family, catalytic domain GJQ55_RS10535 PF08245 Mur ligase middle domain GJQ55_RS10540 PF08245 Mur ligase middle domain GJQ55_RS10540 PF02875 Mur ligase family, glutamate ligase domain GJQ55_RS10540 PF01225 Mur ligase family, catalytic domain GJQ55_RS10545 PF03717 Penicillin-binding Protein dimerisation domain GJQ55_RS10545 PF00905 Penicillin binding protein transpeptidase domain GJQ55_RS10550 PF04999 Cell division protein FtsL GJQ55_RS10555 PF01795 MraW methylase family GJQ55_RS10560 PF02381 MraZ protein, putative antitoxin-like GJQ55_RS10580 PF10417 C-terminal domain of 1-Cys peroxiredoxin GJQ55_RS10580 PF00578 AhpC/TSA family GJQ55_RS10590 PF00873 AcrB/AcrD/AcrF family GJQ55_RS10595 PF13533 Biotin-lipoyl like GJQ55_RS10600 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS10605 PF01597 Glycine cleavage H-protein GJQ55_RS10620 PF00689 Cation transporting ATPase, C-terminus GJQ55_RS10620 PF00690 Cation transporter/ATPase, N-terminus GJQ55_RS10625 PF06039 Malate:quinone oxidoreductase (Mqo) GJQ55_RS10630 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GJQ55_RS10635 PF00682 HMGL-like GJQ55_RS10635 PF02436 Conserved carboxylase domain GJQ55_RS10635 PF00364 Biotin-requiring enzyme GJQ55_RS10640 PF04277 Oxaloacetate decarboxylase, gamma chain GJQ55_RS10645 PF01207 Dihydrouridine synthase (Dus) GJQ55_RS10655 PF02798 Glutathione S-transferase, N-terminal domain GJQ55_RS10660 PF00793 DAHP synthetase I family GJQ55_RS10665 PF08003 Protein of unknown function (DUF1698) GJQ55_RS10670 PF13649 Methyltransferase domain GJQ55_RS10675 PF02646 RmuC family GJQ55_RS10685 PF03186 CobD/Cbib protein GJQ55_RS10685 PF17113 Regulatory signalling modulator protein AmpE GJQ55_RS10690 PF01510 N-acetylmuramoyl-L-alanine amidase GJQ55_RS10695 PF01235 Sodium:alanine symporter family GJQ55_RS10700 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GJQ55_RS10700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GJQ55_RS10715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GJQ55_RS10715 PF00437 Type II/IV secretion system protein GJQ55_RS10720 PF00482 Type II secretion system (T2SS), protein F GJQ55_RS10725 PF06750 Bacterial Peptidase A24 N-terminal domain GJQ55_RS10725 PF01478 Type IV leader peptidase family GJQ55_RS10730 PF01121 Dephospho-CoA kinase GJQ55_RS10735 PF03884 DNA gyrase inhibitor YacG GJQ55_RS10745 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS10745 PF00563 EAL domain GJQ55_RS10745 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS10755 PF00563 EAL domain GJQ55_RS10755 PF00072 Response regulator receiver domain GJQ55_RS10755 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS10760 PF01220 Dehydroquinase class II GJQ55_RS10775 PF01207 Dihydrouridine synthase (Dus) GJQ55_RS10780 PF02954 Bacterial regulatory protein, Fis family GJQ55_RS10785 PF01808 AICARFT/IMPCHase bienzyme GJQ55_RS10785 PF02142 MGS-like domain GJQ55_RS10790 PF02844 Phosphoribosylglycinamide synthetase, N domain GJQ55_RS10790 PF02843 Phosphoribosylglycinamide synthetase, C domain GJQ55_RS10790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GJQ55_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS10795 PF00512 His Kinase A (phospho-acceptor) domain GJQ55_RS10795 PF09308 LuxQ, periplasmic GJQ55_RS10795 PF00072 Response regulator receiver domain GJQ55_RS10800 PF06480 FtsH Extracellular GJQ55_RS10800 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS10800 PF01434 Peptidase family M41 GJQ55_RS10800 PF17862 AAA+ lid domain GJQ55_RS10805 PF03232 Ubiquinone biosynthesis protein COQ7 GJQ55_RS10815 PF00226 DnaJ domain GJQ55_RS10815 PF05099 Tellurite resistance protein TerB GJQ55_RS10820 PF00483 Nucleotidyl transferase GJQ55_RS10825 PF01636 Phosphotransferase enzyme family GJQ55_RS10830 PF04453 LPS transport system D GJQ55_RS10830 PF03968 OstA-like protein GJQ55_RS10835 PF09312 SurA N-terminal domain GJQ55_RS10835 PF00639 PPIC-type PPIASE domain GJQ55_RS10840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GJQ55_RS10845 PF00398 Ribosomal RNA adenine dimethylase GJQ55_RS10850 PF04379 ApaG domain GJQ55_RS10855 PF00149 Calcineurin-like phosphoesterase GJQ55_RS10860 PF00581 Rhodanese-like domain GJQ55_RS10885 PF01966 HD domain GJQ55_RS10885 PF12627 Probable RNA and SrmB- binding site of polymerase A GJQ55_RS10885 PF01743 Poly A polymerase head domain GJQ55_RS10890 PF00809 Pterin binding enzyme GJQ55_RS10890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GJQ55_RS10895 PF02152 Dihydroneopterin aldolase GJQ55_RS10900 PF00814 Glycoprotease family GJQ55_RS10905 PF01165 Ribosomal protein S21 GJQ55_RS10910 PF09424 Yqey-like protein GJQ55_RS10915 PF10410 DnaB-helicase binding domain of primase GJQ55_RS10915 PF08278 DNA primase DnaG DnaB-binding GJQ55_RS10915 PF13662 Toprim domain GJQ55_RS10915 PF08275 DNA primase catalytic core, N-terminal domain GJQ55_RS10915 PF01807 CHC2 zinc finger GJQ55_RS10930 PF00111 2Fe-2S iron-sulfur cluster binding domain GJQ55_RS10930 PF01799 [2Fe-2S] binding domain GJQ55_RS10935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GJQ55_RS10940 PF13478 XdhC Rossmann domain GJQ55_RS10940 PF02625 XdhC and CoxI family GJQ55_RS10955 PF00501 AMP-binding enzyme GJQ55_RS10955 PF13193 AMP-binding enzyme C-terminal domain GJQ55_RS10965 PF00892 EamA-like transporter family GJQ55_RS10970 PF01810 LysE type translocator GJQ55_RS10975 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS10975 PF00072 Response regulator receiver domain GJQ55_RS11025 PF02599 Global regulator protein family GJQ55_RS11030 PF01842 ACT domain GJQ55_RS11030 PF13840 ACT domain GJQ55_RS11030 PF00696 Amino acid kinase family GJQ55_RS11035 PF02272 DHHA1 domain GJQ55_RS11035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GJQ55_RS11035 PF01411 tRNA synthetases class II (A) GJQ55_RS11055 PF00561 alpha/beta hydrolase fold GJQ55_RS11060 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS11065 PF02631 RecX family GJQ55_RS11070 PF00154 recA bacterial DNA recombination protein GJQ55_RS11075 PF02464 Competence-damaged protein GJQ55_RS11080 PF01624 MutS domain I GJQ55_RS11080 PF05188 MutS domain II GJQ55_RS11080 PF05192 MutS domain III GJQ55_RS11080 PF05190 MutS family domain IV GJQ55_RS11080 PF00488 MutS domain V GJQ55_RS11085 PF11953 Domain of unknown function (DUF3470) GJQ55_RS11085 PF00037 4Fe-4S binding domain GJQ55_RS11090 PF00140 Sigma-70 factor, region 1.2 GJQ55_RS11090 PF04542 Sigma-70 region 2 GJQ55_RS11090 PF04539 Sigma-70 region 3 GJQ55_RS11090 PF04545 Sigma-70, region 4 GJQ55_RS11095 PF01551 Peptidase family M23 GJQ55_RS11095 PF01476 LysM domain GJQ55_RS11110 PF01975 Survival protein SurE GJQ55_RS11115 PF01142 tRNA pseudouridine synthase D (TruD) GJQ55_RS11120 PF02542 YgbB family GJQ55_RS11125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GJQ55_RS11130 PF04977 Septum formation initiator GJQ55_RS11135 PF00113 Enolase, C-terminal TIM barrel domain GJQ55_RS11135 PF03952 Enolase, N-terminal domain GJQ55_RS11140 PF06418 CTP synthase N-terminus GJQ55_RS11140 PF00117 Glutamine amidotransferase class-I GJQ55_RS11150 PF01618 MotA/TolQ/ExbB proton channel family GJQ55_RS11155 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJQ55_RS11155 PF00691 OmpA family GJQ55_RS11165 PF00672 HAMP domain GJQ55_RS11165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS11175 PF01784 NIF3 (NGG1p interacting factor 3) GJQ55_RS11180 PF13180 PDZ domain GJQ55_RS11185 PF00155 Aminotransferase class I and II GJQ55_RS11190 PF00815 Histidinol dehydrogenase GJQ55_RS11195 PF01634 ATP phosphoribosyltransferase GJQ55_RS11200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GJQ55_RS11205 PF01722 BolA-like protein GJQ55_RS11215 PF02470 MlaD protein GJQ55_RS11220 PF02405 Permease MlaE GJQ55_RS11225 PF00005 ABC transporter GJQ55_RS11230 PF01699 Sodium/calcium exchanger protein GJQ55_RS11235 PF01380 SIS domain GJQ55_RS11235 PF00571 CBS domain GJQ55_RS11245 PF03968 OstA-like protein GJQ55_RS11250 PF00005 ABC transporter GJQ55_RS11250 PF12399 Branched-chain amino acid ATP-binding cassette transporter GJQ55_RS11255 PF00309 Sigma-54 factor, Activator interacting domain (AID) GJQ55_RS11255 PF04963 Sigma-54 factor, core binding domain GJQ55_RS11255 PF04552 Sigma-54, DNA binding domain GJQ55_RS11260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GJQ55_RS11265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GJQ55_RS11270 PF03668 P-loop ATPase protein family GJQ55_RS11275 PF00381 PTS HPr component phosphorylation site GJQ55_RS11280 PF03448 MgtE intracellular N domain GJQ55_RS11280 PF00571 CBS domain GJQ55_RS11280 PF01769 Divalent cation transporter GJQ55_RS11285 PF04751 Protein of unknown function (DUF615) GJQ55_RS11290 PF00795 Carbon-nitrogen hydrolase GJQ55_RS11300 PF10150 Ribonuclease E/G family GJQ55_RS11300 PF00575 S1 RNA binding domain GJQ55_RS11305 PF02545 Maf-like protein GJQ55_RS11315 PF04085 rod shape-determining protein MreC GJQ55_RS11325 PF02686 Glu-tRNAGln amidotransferase C subunit GJQ55_RS11330 PF01425 Amidase GJQ55_RS11335 PF02934 GatB/GatE catalytic domain GJQ55_RS11335 PF02637 GatB domain GJQ55_RS11345 PF04386 Stringent starvation protein B GJQ55_RS11350 PF02798 Glutathione S-transferase, N-terminal domain GJQ55_RS11350 PF00043 Glutathione S-transferase, C-terminal domain GJQ55_RS11355 PF02167 Cytochrome C1 family GJQ55_RS11360 PF00032 Cytochrome b(C-terminal)/b6/petD GJQ55_RS11360 PF00033 Cytochrome b/b6/petB GJQ55_RS11365 PF00355 Rieske [2Fe-2S] domain GJQ55_RS11365 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GJQ55_RS11370 PF00380 Ribosomal protein S9/S16 GJQ55_RS11375 PF00572 Ribosomal protein L13 GJQ55_RS11385 PF16658 Class II release factor RF3, C-terminal domain GJQ55_RS11385 PF00009 Elongation factor Tu GTP binding domain GJQ55_RS11395 PF00072 Response regulator receiver domain GJQ55_RS11405 PF00583 Acetyltransferase (GNAT) family GJQ55_RS11415 PF00682 HMGL-like GJQ55_RS11415 PF08502 LeuA allosteric (dimerisation) domain GJQ55_RS11420 PF02424 ApbE family GJQ55_RS11430 PF03485 Arginyl tRNA synthetase N terminal domain GJQ55_RS11430 PF05746 DALR anticodon binding domain GJQ55_RS11430 PF00750 tRNA synthetases class I (R) GJQ55_RS11435 PF02525 Flavodoxin-like fold GJQ55_RS11440 PF12706 Beta-lactamase superfamily domain GJQ55_RS11440 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJQ55_RS11440 PF17770 Ribonuclease J C-terminal domain GJQ55_RS11450 PF03591 AzlC protein GJQ55_RS11455 PF05437 Branched-chain amino acid transport protein (AzlD) GJQ55_RS11465 PF00920 Dehydratase family GJQ55_RS11470 PF00005 ABC transporter GJQ55_RS11475 PF01230 HIT domain GJQ55_RS11495 PF01066 CDP-alcohol phosphatidyltransferase GJQ55_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS11500 PF03466 LysR substrate binding domain GJQ55_RS11505 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GJQ55_RS11505 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GJQ55_RS11510 PF12792 CSS motif domain associated with EAL GJQ55_RS11510 PF00563 EAL domain GJQ55_RS11515 PF00155 Aminotransferase class I and II GJQ55_RS11520 PF02657 Fe-S metabolism associated domain GJQ55_RS11525 PF00672 HAMP domain GJQ55_RS11525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS11530 PF02687 FtsX-like permease family GJQ55_RS11530 PF12704 MacB-like periplasmic core domain GJQ55_RS11530 PF00005 ABC transporter GJQ55_RS11535 PF00005 ABC transporter GJQ55_RS11535 PF02687 FtsX-like permease family GJQ55_RS11535 PF12704 MacB-like periplasmic core domain GJQ55_RS11545 PF02321 Outer membrane efflux protein GJQ55_RS11550 PF01116 Fructose-bisphosphate aldolase class-II GJQ55_RS11555 PF00162 Phosphoglycerate kinase GJQ55_RS11560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GJQ55_RS11560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GJQ55_RS11565 PF00296 Luciferase-like monooxygenase GJQ55_RS11575 PF17763 Glutaminase/Asparaginase C-terminal domain GJQ55_RS11575 PF00710 Asparaginase, N-terminal GJQ55_RS11580 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GJQ55_RS11585 PF00483 Nucleotidyl transferase GJQ55_RS11585 PF01050 Mannose-6-phosphate isomerase GJQ55_RS11590 PF00149 Calcineurin-like phosphoesterase GJQ55_RS11595 PF00849 RNA pseudouridylate synthase GJQ55_RS11595 PF01479 S4 domain GJQ55_RS11620 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system GJQ55_RS11625 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system GJQ55_RS11635 PF00588 SpoU rRNA Methylase family GJQ55_RS11635 PF08032 RNA 2'-O ribose methyltransferase substrate binding GJQ55_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS11645 PF03466 LysR substrate binding domain GJQ55_RS11655 PF08267 Cobalamin-independent synthase, N-terminal domain GJQ55_RS11655 PF01717 Cobalamin-independent synthase, Catalytic domain GJQ55_RS11660 PF01925 Sulfite exporter TauE/SafE GJQ55_RS11665 PF00106 short chain dehydrogenase GJQ55_RS11675 PF00456 Transketolase, thiamine diphosphate binding domain GJQ55_RS11675 PF02779 Transketolase, pyrimidine binding domain GJQ55_RS11675 PF02780 Transketolase, C-terminal domain GJQ55_RS11680 PF12392 Collagenase GJQ55_RS11680 PF01136 Peptidase family U32 GJQ55_RS11685 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GJQ55_RS11695 PF03480 Bacterial extracellular solute-binding protein, family 7 GJQ55_RS11700 PF04237 YjbR GJQ55_RS11705 PF00842 Alanine racemase, C-terminal domain GJQ55_RS11705 PF01168 Alanine racemase, N-terminal domain GJQ55_RS11735 PF00772 DnaB-like helicase N terminal domain GJQ55_RS11735 PF03796 DnaB-like helicase C terminal domain GJQ55_RS11740 PF03948 Ribosomal protein L9, C-terminal domain GJQ55_RS11740 PF01281 Ribosomal protein L9, N-terminal domain GJQ55_RS11750 PF01084 Ribosomal protein S18 GJQ55_RS11755 PF01250 Ribosomal protein S6 GJQ55_RS11770 PF00883 Cytosol aminopeptidase family, catalytic domain GJQ55_RS11770 PF02789 Cytosol aminopeptidase family, N-terminal domain GJQ55_RS11775 PF00484 Carbonic anhydrase GJQ55_RS11780 PF02436 Conserved carboxylase domain GJQ55_RS11780 PF00364 Biotin-requiring enzyme GJQ55_RS11780 PF00682 HMGL-like GJQ55_RS11785 PF02785 Biotin carboxylase C-terminal domain GJQ55_RS11785 PF00289 Biotin carboxylase, N-terminal domain GJQ55_RS11785 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJQ55_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS11790 PF03466 LysR substrate binding domain GJQ55_RS11795 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS11795 PF13192 Thioredoxin domain GJQ55_RS11800 PF10417 C-terminal domain of 1-Cys peroxiredoxin GJQ55_RS11800 PF00578 AhpC/TSA family GJQ55_RS11805 PF08032 RNA 2'-O ribose methyltransferase substrate binding GJQ55_RS11805 PF00588 SpoU rRNA Methylase family GJQ55_RS11810 PF00773 RNB domain GJQ55_RS11810 PF00575 S1 RNA binding domain GJQ55_RS11810 PF17876 Cold shock domain GJQ55_RS11810 PF08461 Ribonuclease R winged-helix domain GJQ55_RS11810 PF08206 Ribonuclease B OB domain GJQ55_RS11820 PF00672 HAMP domain GJQ55_RS11820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS11820 PF17200 Single Cache domain 2 GJQ55_RS11825 PF07724 AAA domain (Cdc48 subfamily) GJQ55_RS11825 PF10431 C-terminal, D2-small domain, of ClpB protein GJQ55_RS11825 PF00004 ATPase family associated with various cellular activities (AAA) GJQ55_RS11830 PF00227 Proteasome subunit GJQ55_RS11835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJQ55_RS11855 PF00753 Metallo-beta-lactamase superfamily GJQ55_RS11865 PF01197 Ribosomal protein L31 GJQ55_RS11870 PF00270 DEAD/DEAH box helicase GJQ55_RS11870 PF17764 3′ DNA-binding domain (3′BD) GJQ55_RS11870 PF18074 Primosomal protein N C-terminal domain GJQ55_RS11870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GJQ55_RS11870 PF00271 Helicase conserved C-terminal domain GJQ55_RS11875 PF04608 Phosphatidylglycerophosphatase A GJQ55_RS11880 PF08362 YcdC-like protein, C-terminal region GJQ55_RS11880 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS11890 PF01208 Uroporphyrinogen decarboxylase (URO-D) GJQ55_RS11900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GJQ55_RS11900 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJQ55_RS11905 PF00310 Glutamine amidotransferases class-II GJQ55_RS11905 PF04898 Glutamate synthase central domain GJQ55_RS11905 PF01645 Conserved region in glutamate synthase GJQ55_RS11905 PF01493 GXGXG motif GJQ55_RS11915 PF01761 3-dehydroquinate synthase GJQ55_RS11920 PF01202 Shikimate kinase GJQ55_RS11925 PF11741 AMIN domain GJQ55_RS11925 PF07660 Secretin and TonB N terminus short domain GJQ55_RS11925 PF03958 Bacterial type II/III secretion system short domain GJQ55_RS11925 PF00263 Bacterial type II and III secretion system protein GJQ55_RS11930 PF04351 Pilus assembly protein, PilP GJQ55_RS11935 PF04350 Pilus assembly protein, PilO GJQ55_RS11940 PF05137 Fimbrial assembly protein (PilN) GJQ55_RS11945 PF11104 Type IV pilus assembly protein PilM; GJQ55_RS11950 PF17092 Penicillin-binding protein OB-like domain GJQ55_RS11950 PF00912 Transglycosylase GJQ55_RS11950 PF00905 Penicillin binding protein transpeptidase domain GJQ55_RS11955 PF01565 FAD binding domain GJQ55_RS11955 PF02913 FAD linked oxidases, C-terminal domain GJQ55_RS11960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJQ55_RS11960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJQ55_RS11965 PF00977 Histidine biosynthesis protein GJQ55_RS11970 PF00977 Histidine biosynthesis protein GJQ55_RS11975 PF00117 Glutamine amidotransferase class-I GJQ55_RS11980 PF00475 Imidazoleglycerol-phosphate dehydratase GJQ55_RS11995 PF00563 EAL domain GJQ55_RS11995 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS11995 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS12000 PF10576 Iron-sulfur binding domain of endonuclease III GJQ55_RS12000 PF00633 Helix-hairpin-helix motif GJQ55_RS12000 PF00730 HhH-GPD superfamily base excision DNA repair protein GJQ55_RS12000 PF14815 NUDIX domain GJQ55_RS12005 PF04362 Bacterial Fe(2+) trafficking GJQ55_RS12040 PF00579 tRNA synthetases class I (W and Y) GJQ55_RS12045 PF04225 Opacity-associated protein A LysM-like domain GJQ55_RS12045 PF01551 Peptidase family M23 GJQ55_RS12050 PF03702 Anhydro-N-acetylmuramic acid kinase GJQ55_RS12055 PF01521 Iron-sulphur cluster biosynthesis GJQ55_RS12070 PF01118 Semialdehyde dehydrogenase, NAD binding domain GJQ55_RS12070 PF02774 Semialdehyde dehydrogenase, dimerisation domain GJQ55_RS12075 PF00654 Voltage gated chloride channel GJQ55_RS12080 PF03653 Uncharacterised protein family (UPF0093) GJQ55_RS12085 PF00202 Aminotransferase class-III GJQ55_RS12095 PF00672 HAMP domain GJQ55_RS12095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS12105 PF00905 Penicillin binding protein transpeptidase domain GJQ55_RS12105 PF00912 Transglycosylase GJQ55_RS12105 PF14814 Bifunctional transglycosylase second domain GJQ55_RS12110 PF03553 Na+/H+ antiporter family GJQ55_RS12115 PF03710 Glutamate-ammonia ligase adenylyltransferase GJQ55_RS12115 PF08335 GlnD PII-uridylyltransferase GJQ55_RS12120 PF01063 Amino-transferase class IV GJQ55_RS12125 PF13230 Glutamine amidotransferases class-II GJQ55_RS12145 PF00245 Alkaline phosphatase GJQ55_RS12150 PF01131 DNA topoisomerase GJQ55_RS12150 PF01751 Toprim domain GJQ55_RS12155 PF01841 Transglutaminase-like superfamily GJQ55_RS12155 PF08379 Bacterial transglutaminase-like N-terminal region GJQ55_RS12165 PF17863 AAA lid domain GJQ55_RS12165 PF07726 ATPase family associated with various cellular activities (AAA) GJQ55_RS12170 PF01022 Bacterial regulatory protein, arsR family GJQ55_RS12175 PF02773 S-adenosylmethionine synthetase, C-terminal domain GJQ55_RS12175 PF02772 S-adenosylmethionine synthetase, central domain GJQ55_RS12175 PF00438 S-adenosylmethionine synthetase, N-terminal domain GJQ55_RS12185 PF05221 S-adenosyl-L-homocysteine hydrolase GJQ55_RS12185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GJQ55_RS12190 PF02219 Methylenetetrahydrofolate reductase GJQ55_RS12200 PF01050 Mannose-6-phosphate isomerase GJQ55_RS12200 PF00483 Nucleotidyl transferase GJQ55_RS12205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJQ55_RS12205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJQ55_RS12205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJQ55_RS12205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJQ55_RS12215 PF00535 Glycosyl transferase family 2 GJQ55_RS12220 PF00534 Glycosyl transferases group 1 GJQ55_RS12225 PF04932 O-Antigen ligase GJQ55_RS12235 PF01339 CheB methylesterase GJQ55_RS12235 PF00072 Response regulator receiver domain GJQ55_RS12240 PF01627 Hpt domain GJQ55_RS12240 PF00072 Response regulator receiver domain GJQ55_RS12240 PF01584 CheW-like domain GJQ55_RS12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS12240 PF02895 Signal transducing histidine kinase, homodimeric domain GJQ55_RS12245 PF01739 CheR methyltransferase, SAM binding domain GJQ55_RS12245 PF03705 CheR methyltransferase, all-alpha domain GJQ55_RS12250 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GJQ55_RS12250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GJQ55_RS12255 PF01584 CheW-like domain GJQ55_RS12260 PF00072 Response regulator receiver domain GJQ55_RS12265 PF00072 Response regulator receiver domain GJQ55_RS12270 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GJQ55_RS12270 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GJQ55_RS12280 PF02622 Uncharacterized ACR, COG1678 GJQ55_RS12285 PF03652 Holliday junction resolvase GJQ55_RS12290 PF00156 Phosphoribosyl transferase domain GJQ55_RS12295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GJQ55_RS12295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GJQ55_RS12300 PF01979 Amidohydrolase family GJQ55_RS12305 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GJQ55_RS12310 PF01467 Cytidylyltransferase-like GJQ55_RS12310 PF00294 pfkB family carbohydrate kinase GJQ55_RS12315 PF03279 Bacterial lipid A biosynthesis acyltransferase GJQ55_RS12325 PF00437 Type II/IV secretion system protein GJQ55_RS12325 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GJQ55_RS12335 PF07687 Peptidase dimerisation domain GJQ55_RS12335 PF01546 Peptidase family M20/M25/M40 GJQ55_RS12340 PF00696 Amino acid kinase family GJQ55_RS12340 PF00583 Acetyltransferase (GNAT) family GJQ55_RS12360 PF00186 Dihydrofolate reductase GJQ55_RS12365 PF00303 Thymidylate synthase GJQ55_RS12370 PF01790 Prolipoprotein diacylglyceryl transferase GJQ55_RS12375 PF01925 Sulfite exporter TauE/SafE GJQ55_RS12385 PF03734 L,D-transpeptidase catalytic domain GJQ55_RS12390 PF05951 Bacterial protein of unknown function (DUF882) GJQ55_RS12395 PF01590 GAF domain GJQ55_RS12395 PF05524 PEP-utilising enzyme, N-terminal GJQ55_RS12395 PF00391 PEP-utilising enzyme, mobile domain GJQ55_RS12395 PF02896 PEP-utilising enzyme, TIM barrel domain GJQ55_RS12400 PF00293 NUDIX domain GJQ55_RS12415 PF10672 S-adenosylmethionine-dependent methyltransferase GJQ55_RS12415 PF17785 PUA-like domain GJQ55_RS12425 PF03480 Bacterial extracellular solute-binding protein, family 7 GJQ55_RS12430 PF00580 UvrD/REP helicase N-terminal domain GJQ55_RS12430 PF13361 UvrD-like helicase C-terminal domain GJQ55_RS12435 PF01418 Helix-turn-helix domain, rpiR family GJQ55_RS12435 PF01380 SIS domain GJQ55_RS12445 PF00909 Ammonium Transporter Family GJQ55_RS12450 PF00543 Nitrogen regulatory protein P-II GJQ55_RS12460 PF04380 Membrane fusogenic activity GJQ55_RS12470 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS12470 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS12470 PF00563 EAL domain GJQ55_RS12480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS12480 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS12480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJQ55_RS12505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GJQ55_RS12505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GJQ55_RS12510 PF02321 Outer membrane efflux protein GJQ55_RS12515 PF00293 NUDIX domain GJQ55_RS12525 PF00149 Calcineurin-like phosphoesterase GJQ55_RS12530 PF05728 Uncharacterised protein family (UPF0227) GJQ55_RS12535 PF01751 Toprim domain GJQ55_RS12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS12535 PF00986 DNA gyrase B subunit, carboxyl terminus GJQ55_RS12535 PF00204 DNA gyrase B GJQ55_RS12540 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS12540 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS12540 PF00563 EAL domain GJQ55_RS12545 PF02678 Pirin GJQ55_RS12545 PF05726 Pirin C-terminal cupin domain GJQ55_RS12550 PF00521 DNA gyrase/topoisomerase IV, subunit A GJQ55_RS12550 PF03989 DNA gyrase C-terminal domain, beta-propeller GJQ55_RS12555 PF17284 Spermidine synthase tetramerisation domain GJQ55_RS12560 PF01295 Adenylate cyclase, class-I GJQ55_RS12560 PF12633 Adenylate cyclase NT domain GJQ55_RS12570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GJQ55_RS12570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GJQ55_RS12575 PF01678 Diaminopimelate epimerase GJQ55_RS12585 PF13419 Haloacid dehalogenase-like hydrolase GJQ55_RS12595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJQ55_RS12600 PF01464 Transglycosylase SLT domain GJQ55_RS12600 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GJQ55_RS12605 PF00271 Helicase conserved C-terminal domain GJQ55_RS12605 PF00270 DEAD/DEAH box helicase GJQ55_RS12610 PF13617 YnbE-like lipoprotein GJQ55_RS12620 PF04011 LemA family GJQ55_RS12625 PF01435 Peptidase family M48 GJQ55_RS12630 PF04545 Sigma-70, region 4 GJQ55_RS12630 PF04542 Sigma-70 region 2 GJQ55_RS12630 PF00140 Sigma-70 factor, region 1.2 GJQ55_RS12635 PF18075 FtsX extracellular domain GJQ55_RS12640 PF00005 ABC transporter GJQ55_RS12645 PF00448 SRP54-type protein, GTPase domain GJQ55_RS12645 PF02881 SRP54-type protein, helical bundle domain GJQ55_RS12665 PF02909 Tetracyclin repressor-like, C-terminal domain GJQ55_RS12665 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS12670 PF00171 Aldehyde dehydrogenase family GJQ55_RS12680 PF00732 GMC oxidoreductase GJQ55_RS12680 PF05199 GMC oxidoreductase GJQ55_RS12685 PF01467 Cytidylyltransferase-like GJQ55_RS12690 PF00037 4Fe-4S binding domain GJQ55_RS12700 PF02698 DUF218 domain GJQ55_RS12710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GJQ55_RS12710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GJQ55_RS12710 PF06827 Zinc finger found in FPG and IleRS GJQ55_RS12715 PF00471 Ribosomal protein L33 GJQ55_RS12720 PF00830 Ribosomal L28 family GJQ55_RS12725 PF04002 RadC-like JAB domain GJQ55_RS12730 PF02441 Flavoprotein GJQ55_RS12730 PF04127 DNA / pantothenate metabolism flavoprotein GJQ55_RS12735 PF00692 dUTPase GJQ55_RS12740 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJQ55_RS12740 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJQ55_RS12740 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJQ55_RS12740 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJQ55_RS12745 PF00696 Amino acid kinase family GJQ55_RS12750 PF00440 Bacterial regulatory proteins, tetR family GJQ55_RS12760 PF00156 Phosphoribosyl transferase domain GJQ55_RS12770 PF03725 3' exoribonuclease family, domain 2 GJQ55_RS12770 PF01138 3' exoribonuclease family, domain 1 GJQ55_RS12775 PF08340 Domain of unknown function (DUF1732) GJQ55_RS12775 PF03755 YicC-like family, N-terminal region GJQ55_RS12780 PF00625 Guanylate kinase GJQ55_RS12785 PF01192 RNA polymerase Rpb6 GJQ55_RS12790 PF02824 TGS domain GJQ55_RS12790 PF04607 Region found in RelA / SpoT proteins GJQ55_RS12790 PF13291 ACT domain GJQ55_RS12795 PF01042 Endoribonuclease L-PSP GJQ55_RS12805 PF03466 LysR substrate binding domain GJQ55_RS12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS12810 PF00270 DEAD/DEAH box helicase GJQ55_RS12810 PF00271 Helicase conserved C-terminal domain GJQ55_RS12810 PF17191 RecG wedge domain GJQ55_RS12825 PF01435 Peptidase family M48 GJQ55_RS12830 PF00593 TonB dependent receptor GJQ55_RS12830 PF07715 TonB-dependent Receptor Plug Domain GJQ55_RS12850 PF01636 Phosphotransferase enzyme family GJQ55_RS12860 PF01612 3'-5' exonuclease GJQ55_RS12860 PF00476 DNA polymerase family A GJQ55_RS12860 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GJQ55_RS12860 PF01367 5'-3' exonuclease, C-terminal SAM fold GJQ55_RS12870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJQ55_RS12870 PF18158 Adaptive response protein AidB N-terminal domain GJQ55_RS12870 PF02770 Acyl-CoA dehydrogenase, middle domain GJQ55_RS12875 PF03600 Citrate transporter GJQ55_RS12875 PF02080 TrkA-C domain GJQ55_RS12885 PF03600 Citrate transporter GJQ55_RS12885 PF02080 TrkA-C domain GJQ55_RS12895 PF00293 NUDIX domain GJQ55_RS12900 PF13419 Haloacid dehalogenase-like hydrolase GJQ55_RS12905 PF01479 S4 domain GJQ55_RS12910 PF01430 Hsp33 protein GJQ55_RS12915 PF01293 Phosphoenolpyruvate carboxykinase GJQ55_RS12985 PF00575 S1 RNA binding domain GJQ55_RS12985 PF09371 Tex-like protein N-terminal domain GJQ55_RS12985 PF16921 Tex protein YqgF-like domain GJQ55_RS12985 PF17674 HHH domain GJQ55_RS12995 PF04262 Glutamate-cysteine ligase GJQ55_RS13005 PF02600 Disulfide bond formation protein DsbB GJQ55_RS13010 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GJQ55_RS13040 PF00005 ABC transporter GJQ55_RS13040 PF12848 ABC transporter GJQ55_RS13050 PF03471 Transporter associated domain GJQ55_RS13050 PF00571 CBS domain GJQ55_RS13050 PF01595 Cyclin M transmembrane N-terminal domain GJQ55_RS13055 PF00005 ABC transporter GJQ55_RS13055 PF00664 ABC transporter transmembrane region GJQ55_RS13060 PF00005 ABC transporter GJQ55_RS13060 PF00664 ABC transporter transmembrane region GJQ55_RS13080 PF02390 Putative methyltransferase GJQ55_RS13085 PF04241 Protein of unknown function (DUF423) GJQ55_RS13090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GJQ55_RS13095 PF00175 Oxidoreductase NAD-binding domain GJQ55_RS13100 PF00924 Mechanosensitive ion channel GJQ55_RS13100 PF05552 Conserved TM helix GJQ55_RS13105 PF13458 Periplasmic binding protein GJQ55_RS13115 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GJQ55_RS13120 PF02602 Uroporphyrinogen-III synthase HemD GJQ55_RS13125 PF03900 Porphobilinogen deaminase, C-terminal domain GJQ55_RS13125 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GJQ55_RS13130 PF04397 LytTr DNA-binding domain GJQ55_RS13130 PF00072 Response regulator receiver domain GJQ55_RS13135 PF07694 5TMR of 5TMR-LYT GJQ55_RS13135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS13135 PF06580 Histidine kinase GJQ55_RS13140 PF00206 Lyase GJQ55_RS13140 PF14698 Argininosuccinate lyase C-terminal GJQ55_RS13150 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS13150 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS13150 PF00563 EAL domain GJQ55_RS13160 PF03466 LysR substrate binding domain GJQ55_RS13160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJQ55_RS13165 PF00563 EAL domain GJQ55_RS13165 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS13165 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS13175 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GJQ55_RS13175 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GJQ55_RS13180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJQ55_RS13180 PF02874 ATP synthase alpha/beta family, beta-barrel domain GJQ55_RS13185 PF00231 ATP synthase GJQ55_RS13190 PF02874 ATP synthase alpha/beta family, beta-barrel domain GJQ55_RS13190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJQ55_RS13190 PF00306 ATP synthase alpha/beta chain, C terminal domain GJQ55_RS13195 PF00213 ATP synthase delta (OSCP) subunit GJQ55_RS13200 PF00430 ATP synthase B/B' CF(0) GJQ55_RS13205 PF00137 ATP synthase subunit C GJQ55_RS13210 PF00119 ATP synthase A chain GJQ55_RS13220 PF02195 ParB-like nuclease domain GJQ55_RS13220 PF17762 HTH domain found in ParB protein GJQ55_RS13225 PF13614 AAA domain GJQ55_RS13230 PF02527 rRNA small subunit methyltransferase G GJQ55_RS13235 PF06779 Uncharacterised MFS-type transporter YbfB GJQ55_RS13250 PF00486 Transcriptional regulatory protein, C terminal GJQ55_RS13250 PF00072 Response regulator receiver domain GJQ55_RS13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJQ55_RS13275 PF13932 GidA associated domain GJQ55_RS13275 PF01134 Glucose inhibited division protein A GJQ55_RS13300 PF01292 Prokaryotic cytochrome b561 GJQ55_RS13305 PF03707 Bacterial signalling protein N terminal repeat GJQ55_RS13305 PF00990 Diguanylate cyclase, GGDEF domain GJQ55_RS13305 PF00563 EAL domain GJQ55_RS13315 PF01926 50S ribosome-binding GTPase GJQ55_RS13315 PF12631 MnmE helical domain GJQ55_RS13315 PF10396 GTP-binding protein TrmE N-terminus GJQ55_RS13320 PF02096 60Kd inner membrane protein GJQ55_RS13320 PF14849 YidC periplasmic domain GJQ55_RS13325 PF01809 Putative membrane protein insertion efficiency factor GJQ55_RS13330 PF00825 Ribonuclease P GJQ55_RS13335 PF00468 Ribosomal protein L34