locus-tag class description KJS28_RS00010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJS28_RS00010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJS28_RS00015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJS28_RS00015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJS28_RS00025 PF03553 Na+/H+ antiporter family KJS28_RS00030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJS28_RS00030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJS28_RS00060 PF03841 L-seryl-tRNA selenium transferase KJS28_RS00060 PF12390 Selenocysteine synthase N terminal KJS28_RS00065 PF09107 Elongation factor SelB, winged helix KJS28_RS00065 PF09106 Elongation factor SelB, winged helix KJS28_RS00065 PF09105 Elongation factor SelB, winged helix KJS28_RS00065 PF03144 Elongation factor Tu domain 2 KJS28_RS00065 PF00009 Elongation factor Tu GTP binding domain KJS28_RS00080 PF09338 Glycine/sarcosine/betaine reductase component B subunits KJS28_RS00090 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS00095 PF00085 Thioredoxin KJS28_RS00105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KJS28_RS00110 PF02504 Fatty acid synthesis protein KJS28_RS00115 PF13091 PLD-like domain KJS28_RS00120 PF00118 TCP-1/cpn60 chaperonin family KJS28_RS00125 PF00166 Chaperonin 10 Kd subunit KJS28_RS00130 PF00781 Diacylglycerol kinase catalytic domain KJS28_RS00135 PF02926 THUMP domain KJS28_RS00135 PF01170 Putative RNA methylase family UPF0020 KJS28_RS00140 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS00155 PF00005 ABC transporter KJS28_RS00180 PF01145 SPFH domain / Band 7 family KJS28_RS00185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KJS28_RS00185 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KJS28_RS00190 PF13186 Iron-sulfur cluster-binding domain KJS28_RS00190 PF04055 Radical SAM superfamily KJS28_RS00200 PF00575 S1 RNA binding domain KJS28_RS00215 PF01479 S4 domain KJS28_RS00220 PF00216 Bacterial DNA-binding protein KJS28_RS00225 PF03819 MazG nucleotide pyrophosphohydrolase domain KJS28_RS00230 PF01943 Polysaccharide biosynthesis protein KJS28_RS00230 PF14667 Polysaccharide biosynthesis C-terminal domain KJS28_RS00235 PF04055 Radical SAM superfamily KJS28_RS00240 PF00753 Metallo-beta-lactamase superfamily KJS28_RS00245 PF02580 D-Tyr-tRNA(Tyr) deacylase KJS28_RS00250 PF02824 TGS domain KJS28_RS00250 PF04607 Region found in RelA / SpoT proteins KJS28_RS00250 PF13291 ACT domain KJS28_RS00255 PF17768 RecJ OB domain KJS28_RS00255 PF02272 DHHA1 domain KJS28_RS00255 PF01368 DHH family KJS28_RS00255 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KJS28_RS00275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KJS28_RS00285 PF04542 Sigma-70 region 2 KJS28_RS00285 PF08281 Sigma-70, region 4 KJS28_RS00290 PF01207 Dihydrouridine synthase (Dus) KJS28_RS00305 PF00472 RF-1 domain KJS28_RS00305 PF03462 PCRF domain KJS28_RS00310 PF07702 UTRA domain KJS28_RS00310 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS00315 PF14437 MafB19-like deaminase KJS28_RS00330 PF01171 PP-loop family KJS28_RS00335 PF00572 Ribosomal protein L13 KJS28_RS00340 PF00380 Ribosomal protein S9/S16 KJS28_RS00350 PF10672 S-adenosylmethionine-dependent methyltransferase KJS28_RS00350 PF17785 PUA-like domain KJS28_RS00365 PF00710 Asparaginase, N-terminal KJS28_RS00365 PF17763 Glutaminase/Asparaginase C-terminal domain KJS28_RS00370 PF00149 Calcineurin-like phosphoesterase KJS28_RS00370 PF12320 Type 5 capsule protein repressor C-terminal domain KJS28_RS00375 PF04073 Aminoacyl-tRNA editing domain KJS28_RS00380 PF13277 YmdB-like protein KJS28_RS00395 PF12072 Domain of unknown function (DUF3552) KJS28_RS00395 PF00013 KH domain KJS28_RS00395 PF01966 HD domain KJS28_RS00410 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment KJS28_RS00410 PF01297 Zinc-uptake complex component A periplasmic KJS28_RS00415 PF00005 ABC transporter KJS28_RS00420 PF00950 ABC 3 transport family KJS28_RS00425 PF17384 RimP C-terminal SH3 domain KJS28_RS00425 PF02576 RimP N-terminal domain KJS28_RS00430 PF08529 NusA N-terminal domain KJS28_RS00430 PF13184 NusA-like KH domain KJS28_RS00430 PF00575 S1 RNA binding domain KJS28_RS00435 PF04296 Protein of unknown function (DUF448) KJS28_RS00445 PF04760 Translation initiation factor IF-2, N-terminal region KJS28_RS00445 PF00009 Elongation factor Tu GTP binding domain KJS28_RS00445 PF11987 Translation-initiation factor 2 KJS28_RS00450 PF02033 Ribosome-binding factor A KJS28_RS00455 PF02272 DHHA1 domain KJS28_RS00455 PF01368 DHH family KJS28_RS00460 PF01509 TruB family pseudouridylate synthase (N terminal domain) KJS28_RS00460 PF16198 tRNA pseudouridylate synthase B C-terminal domain KJS28_RS00460 PF09157 Pseudouridine synthase II TruB, C-terminal KJS28_RS00465 PF01687 Riboflavin kinase KJS28_RS00465 PF06574 FAD synthetase KJS28_RS00475 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS00480 PF00303 Thymidylate synthase KJS28_RS00485 PF00186 Dihydrofolate reductase KJS28_RS00495 PF01541 GIY-YIG catalytic domain KJS28_RS00495 PF08459 UvrC Helix-hairpin-helix N-terminal KJS28_RS00495 PF02151 UvrB/uvrC motif KJS28_RS00500 PF03734 L,D-transpeptidase catalytic domain KJS28_RS00505 PF01472 PUA domain KJS28_RS00505 PF00696 Amino acid kinase family KJS28_RS00510 PF00171 Aldehyde dehydrogenase family KJS28_RS00520 PF00924 Mechanosensitive ion channel KJS28_RS00520 PF05552 Conserved TM helix KJS28_RS00525 PF01842 ACT domain KJS28_RS00525 PF00742 Homoserine dehydrogenase KJS28_RS00525 PF03447 Homoserine dehydrogenase, NAD binding domain KJS28_RS00530 PF01842 ACT domain KJS28_RS00530 PF00742 Homoserine dehydrogenase KJS28_RS00530 PF03447 Homoserine dehydrogenase, NAD binding domain KJS28_RS00565 PF07859 alpha/beta hydrolase fold KJS28_RS00585 PF00005 ABC transporter KJS28_RS00595 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KJS28_RS00595 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KJS28_RS00600 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS00600 PF00072 Response regulator receiver domain KJS28_RS00605 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS00605 PF00672 HAMP domain KJS28_RS00605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS00610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KJS28_RS00615 PF02397 Bacterial sugar transferase KJS28_RS00620 PF04991 LicD family KJS28_RS00625 PF04991 LicD family KJS28_RS00630 PF17103 Stealth protein CR4, conserved region 4 KJS28_RS00630 PF11380 Stealth protein CR2, conserved region 2 KJS28_RS00630 PF17101 Stealth protein CR1, conserved region 1 KJS28_RS00645 PF00266 Aminotransferase class-V KJS28_RS00655 PF12804 MobA-like NTP transferase domain KJS28_RS00655 PF00132 Bacterial transferase hexapeptide (six repeats) KJS28_RS00660 PF02719 Polysaccharide biosynthesis protein KJS28_RS00665 PF00005 ABC transporter KJS28_RS00665 PF02687 FtsX-like permease family KJS28_RS00665 PF12704 MacB-like periplasmic core domain KJS28_RS00680 PF06100 MCRA family KJS28_RS00690 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase KJS28_RS00690 PF09363 XFP C-terminal domain KJS28_RS00690 PF09364 XFP N-terminal domain KJS28_RS00715 PF02654 Cobalamin-5-phosphate synthase KJS28_RS00725 PF02277 Phosphoribosyltransferase KJS28_RS00740 PF01434 Peptidase family M41 KJS28_RS00740 PF06480 FtsH Extracellular KJS28_RS00740 PF17862 AAA+ lid domain KJS28_RS00740 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS00745 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJS28_RS00745 PF00588 SpoU rRNA Methylase family KJS28_RS00755 PF14492 Elongation Factor G, domain II KJS28_RS00755 PF00679 Elongation factor G C-terminus KJS28_RS00755 PF03144 Elongation factor Tu domain 2 KJS28_RS00755 PF00009 Elongation factor Tu GTP binding domain KJS28_RS00755 PF03764 Elongation factor G, domain IV KJS28_RS00760 PF02915 Rubrerythrin KJS28_RS00775 PF01522 Polysaccharide deacetylase KJS28_RS00785 PF13411 MerR HTH family regulatory protein KJS28_RS00800 PF03631 Virulence factor BrkB KJS28_RS00805 PF02254 TrkA-N domain KJS28_RS00805 PF02080 TrkA-C domain KJS28_RS00810 PF01966 HD domain KJS28_RS00810 PF01743 Poly A polymerase head domain KJS28_RS00810 PF12627 Probable RNA and SrmB- binding site of polymerase A KJS28_RS00815 PF03030 Inorganic H+ pyrophosphatase KJS28_RS00820 PF01070 FMN-dependent dehydrogenase KJS28_RS00840 PF05816 Toxic anion resistance protein (TelA) KJS28_RS00865 PF01016 Ribosomal L27 protein KJS28_RS00875 PF00829 Ribosomal prokaryotic L21 protein KJS28_RS00890 PF05636 HIGH Nucleotidyl Transferase KJS28_RS00910 PF00293 NUDIX domain KJS28_RS00915 PF04463 Protein of unknown function (DUF523) KJS28_RS00920 PF00356 Bacterial regulatory proteins, lacI family KJS28_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS00940 PF02446 4-alpha-glucanotransferase KJS28_RS00950 PF00294 pfkB family carbohydrate kinase KJS28_RS00955 PF01081 KDPG and KHG aldolase KJS28_RS00960 PF03786 D-mannonate dehydratase (UxuA) KJS28_RS00965 PF08125 Mannitol dehydrogenase C-terminal domain KJS28_RS00965 PF01232 Mannitol dehydrogenase Rossmann domain KJS28_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS00975 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJS28_RS01000 PF00005 ABC transporter KJS28_RS01005 PF02614 Glucuronate isomerase KJS28_RS01010 PF07729 FCD domain KJS28_RS01010 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS01015 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KJS28_RS01015 PF08666 SAF domain KJS28_RS01020 PF01232 Mannitol dehydrogenase Rossmann domain KJS28_RS01020 PF08125 Mannitol dehydrogenase C-terminal domain KJS28_RS01030 PF00005 ABC transporter KJS28_RS01040 PF12704 MacB-like periplasmic core domain KJS28_RS01040 PF02687 FtsX-like permease family KJS28_RS01045 PF01048 Phosphorylase superfamily KJS28_RS01065 PF00871 Acetokinase family KJS28_RS01095 PF00579 tRNA synthetases class I (W and Y) KJS28_RS01130 PF09190 DALR domain KJS28_RS01130 PF01406 tRNA synthetases class I (C) catalytic domain KJS28_RS01135 PF01381 Helix-turn-helix KJS28_RS01145 PF01066 CDP-alcohol phosphatidyltransferase KJS28_RS01150 PF18693 TRAM domain KJS28_RS01150 PF00919 Uncharacterized protein family UPF0004 KJS28_RS01150 PF04055 Radical SAM superfamily KJS28_RS01155 PF02631 RecX family KJS28_RS01160 PF00154 recA bacterial DNA recombination protein KJS28_RS01165 PF17827 PrmC N-terminal domain KJS28_RS01165 PF05175 Methyltransferase small domain KJS28_RS01170 PF07136 Protein of unknown function (DUF1385) KJS28_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS01175 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS01175 PF00672 HAMP domain KJS28_RS01180 PF00072 Response regulator receiver domain KJS28_RS01180 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS01190 PF02824 TGS domain KJS28_RS01190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJS28_RS01190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJS28_RS01190 PF03129 Anticodon binding domain KJS28_RS01210 PF00072 Response regulator receiver domain KJS28_RS01210 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS01215 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS01215 PF00672 HAMP domain KJS28_RS01230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KJS28_RS01235 PF01668 SmpB protein KJS28_RS01240 PF00293 NUDIX domain KJS28_RS01245 PF00291 Pyridoxal-phosphate dependent enzyme KJS28_RS01250 PF07687 Peptidase dimerisation domain KJS28_RS01250 PF01546 Peptidase family M20/M25/M40 KJS28_RS01255 PF09383 NIL domain KJS28_RS01255 PF00005 ABC transporter KJS28_RS01260 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS01270 PF00881 Nitroreductase family KJS28_RS01275 PF00905 Penicillin binding protein transpeptidase domain KJS28_RS01280 PF01098 Cell cycle protein KJS28_RS01320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS01325 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS01330 PF12911 N-terminal TM domain of oligopeptide transport permease C KJS28_RS01330 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS01335 PF00005 ABC transporter KJS28_RS01335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS01340 PF00005 ABC transporter KJS28_RS01340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS01350 PF02127 Aminopeptidase I zinc metalloprotease (M18) KJS28_RS01365 PF13847 Methyltransferase domain KJS28_RS01370 PF01554 MatE KJS28_RS01375 PF00266 Aminotransferase class-V KJS28_RS01380 PF04055 Radical SAM superfamily KJS28_RS01380 PF01938 TRAM domain KJS28_RS01380 PF00919 Uncharacterized protein family UPF0004 KJS28_RS01390 PF01783 Ribosomal L32p protein family KJS28_RS01400 PF00849 RNA pseudouridylate synthase KJS28_RS01405 PF08402 TOBE domain KJS28_RS01405 PF00005 ABC transporter KJS28_RS01410 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS01415 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS01425 PF05167 Uncharacterised ACR (DUF711) KJS28_RS01435 PF02001 Protein of unknown function DUF134 KJS28_RS01455 PF13545 Crp-like helix-turn-helix domain KJS28_RS01455 PF00027 Cyclic nucleotide-binding domain KJS28_RS01465 PF00072 Response regulator receiver domain KJS28_RS01490 PF00574 Clp protease KJS28_RS01510 PF07670 Nucleoside recognition KJS28_RS01510 PF02421 Ferrous iron transport protein B KJS28_RS01510 PF17910 FeoB cytosolic helical domain KJS28_RS01510 PF07664 Ferrous iron transport protein B C terminus KJS28_RS01510 PF04023 FeoA domain KJS28_RS01545 PF04542 Sigma-70 region 2 KJS28_RS01545 PF04545 Sigma-70, region 4 KJS28_RS01565 PF00899 ThiF family KJS28_RS01580 PF06949 Protein of unknown function (DUF1292) KJS28_RS01585 PF00912 Transglycosylase KJS28_RS01585 PF00905 Penicillin binding protein transpeptidase domain KJS28_RS01590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KJS28_RS01590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJS28_RS01595 PF00266 Aminotransferase class-V KJS28_RS01600 PF00654 Voltage gated chloride channel KJS28_RS01605 PF04239 Protein of unknown function (DUF421) KJS28_RS01615 PF03652 Holliday junction resolvase KJS28_RS01620 PF00471 Ribosomal protein L33 KJS28_RS01630 PF02357 Transcription termination factor nusG KJS28_RS01630 PF00467 KOW motif KJS28_RS01635 PF03946 Ribosomal protein L11, N-terminal domain KJS28_RS01635 PF00298 Ribosomal protein L11, RNA binding domain KJS28_RS01640 PF00687 Ribosomal protein L1p/L10e family KJS28_RS01645 PF00466 Ribosomal protein L10 KJS28_RS01650 PF00542 Ribosomal protein L7/L12 C-terminal domain KJS28_RS01650 PF16320 Ribosomal protein L7/L12 dimerisation domain KJS28_RS01665 PF01476 LysM domain KJS28_RS01665 PF01551 Peptidase family M23 KJS28_RS01690 PF01245 Ribosomal protein L19 KJS28_RS01695 PF11799 impB/mucB/samB family C-terminal domain KJS28_RS01695 PF00817 impB/mucB/samB family KJS28_RS01700 PF12822 ECF transporter, substrate-specific component KJS28_RS01710 PF13443 Cro/C1-type HTH DNA-binding domain KJS28_RS01715 PF01554 MatE KJS28_RS01760 PF03780 Asp23 family, cell envelope-related function KJS28_RS01765 PF01029 NusB family KJS28_RS01770 PF02601 Exonuclease VII, large subunit KJS28_RS01770 PF13742 OB-fold nucleic acid binding domain KJS28_RS01775 PF02609 Exonuclease VII small subunit KJS28_RS01780 PF00348 Polyprenyl synthetase KJS28_RS01795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KJS28_RS01795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KJS28_RS01810 PF00005 ABC transporter KJS28_RS01815 PF06135 IreB regulatory phosphoprotein KJS28_RS01820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KJS28_RS01820 PF03484 tRNA synthetase B5 domain KJS28_RS01820 PF03483 B3/4 domain KJS28_RS01820 PF01588 Putative tRNA binding domain KJS28_RS01820 PF03147 Ferredoxin-fold anticodon binding domain KJS28_RS01825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KJS28_RS01825 PF01409 tRNA synthetases class II core domain (F) KJS28_RS01840 PF01256 Carbohydrate kinase KJS28_RS01840 PF03853 YjeF-related protein N-terminus KJS28_RS01865 PF01380 SIS domain KJS28_RS01870 PF04239 Protein of unknown function (DUF421) KJS28_RS01880 PF03477 ATP cone domain KJS28_RS01890 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KJS28_RS01905 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS01905 PF16736 Single Cache-like KJS28_RS01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS01905 PF00989 PAS fold KJS28_RS01910 PF00072 Response regulator receiver domain KJS28_RS01910 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS01915 PF17674 HHH domain KJS28_RS01915 PF00575 S1 RNA binding domain KJS28_RS01915 PF16921 Tex protein YqgF-like domain KJS28_RS01915 PF09371 Tex-like protein N-terminal domain KJS28_RS01920 PF07943 Penicillin-binding protein 5, C-terminal domain KJS28_RS01920 PF00768 D-alanyl-D-alanine carboxypeptidase KJS28_RS01925 PF00849 RNA pseudouridylate synthase KJS28_RS01925 PF01479 S4 domain KJS28_RS01940 PF06280 Fn3-like domain KJS28_RS01940 PF00746 LPXTG cell wall anchor motif KJS28_RS01940 PF02225 PA domain KJS28_RS01940 PF00082 Subtilase family KJS28_RS01950 PF01209 ubiE/COQ5 methyltransferase family KJS28_RS02035 PF17191 RecG wedge domain KJS28_RS02035 PF13749 Putative ATP-dependent DNA helicase recG C-terminal KJS28_RS02035 PF00270 DEAD/DEAH box helicase KJS28_RS02090 PF00239 Resolvase, N terminal domain KJS28_RS02090 PF02796 Helix-turn-helix domain of resolvase KJS28_RS02100 PF14268 YoaP-like KJS28_RS02100 PF00583 Acetyltransferase (GNAT) family KJS28_RS02115 PF00574 Clp protease KJS28_RS02130 PF08359 YsiA-like protein, C-terminal region KJS28_RS02130 PF00440 Bacterial regulatory proteins, tetR family KJS28_RS02135 PF00082 Subtilase family KJS28_RS02135 PF06280 Fn3-like domain KJS28_RS02135 PF02225 PA domain KJS28_RS02135 PF00746 LPXTG cell wall anchor motif KJS28_RS02140 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS02170 PF10548 P22AR C-terminal domain KJS28_RS02170 PF02498 BRO family, N-terminal domain KJS28_RS02225 PF01555 DNA methylase KJS28_RS02230 PF00877 NlpC/P60 family KJS28_RS02245 PF01751 Toprim domain KJS28_RS02245 PF01131 DNA topoisomerase KJS28_RS02280 PF09856 Predicted transcriptional regulator (DUF2083) KJS28_RS02280 PF01381 Helix-turn-helix KJS28_RS02280 PF06114 IrrE N-terminal-like domain KJS28_RS02285 PF06908 YspA SLOG family KJS28_RS02295 PF13307 Helicase C-terminal domain KJS28_RS02295 PF06733 DEAD_2 KJS28_RS02305 PF18766 SWI2/SNF2 ATPase KJS28_RS02305 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KJS28_RS02305 PF11867 Domain of unknown function (DUF3387) KJS28_RS02325 PF00589 Phage integrase family KJS28_RS02325 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS02340 PF02384 N-6 DNA Methylase KJS28_RS02350 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS02375 PF11799 impB/mucB/samB family C-terminal domain KJS28_RS02375 PF00817 impB/mucB/samB family KJS28_RS02375 PF11798 IMS family HHH motif KJS28_RS02385 PF01661 Macro domain KJS28_RS02425 PF01381 Helix-turn-helix KJS28_RS02475 PF01209 ubiE/COQ5 methyltransferase family KJS28_RS02480 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS02490 PF00209 Sodium:neurotransmitter symporter family KJS28_RS02505 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS02505 PF00589 Phage integrase family KJS28_RS02515 PF07722 Peptidase C26 KJS28_RS02525 PF05343 M42 glutamyl aminopeptidase KJS28_RS02535 PF03323 Bacillus/Clostridium GerA spore germination protein KJS28_RS02540 PF13344 Haloacid dehalogenase-like hydrolase KJS28_RS02545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KJS28_RS02560 PF01467 Cytidylyltransferase-like KJS28_RS02575 PF02381 MraZ protein, putative antitoxin-like KJS28_RS02580 PF01795 MraW methylase family KJS28_RS02590 PF03717 Penicillin-binding Protein dimerisation domain KJS28_RS02590 PF03793 PASTA domain KJS28_RS02590 PF00905 Penicillin binding protein transpeptidase domain KJS28_RS02595 PF02875 Mur ligase family, glutamate ligase domain KJS28_RS02595 PF08245 Mur ligase middle domain KJS28_RS02595 PF01225 Mur ligase family, catalytic domain KJS28_RS02600 PF00953 Glycosyl transferase family 4 KJS28_RS02600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KJS28_RS02605 PF01098 Cell cycle protein KJS28_RS02610 PF04101 Glycosyltransferase family 28 C-terminal domain KJS28_RS02610 PF03033 Glycosyltransferase family 28 N-terminal domain KJS28_RS02615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJS28_RS02620 PF08478 POTRA domain, FtsQ-type KJS28_RS02620 PF03799 Cell division protein FtsQ KJS28_RS02625 PF12327 FtsZ family, C-terminal domain KJS28_RS02625 PF00091 Tubulin/FtsZ family, GTPase domain KJS28_RS02635 PF00588 SpoU rRNA Methylase family KJS28_RS02640 PF17754 MftR C-terminal domain KJS28_RS02640 PF00440 Bacterial regulatory proteins, tetR family KJS28_RS02650 PF00871 Acetokinase family KJS28_RS02655 PF00037 4Fe-4S binding domain KJS28_RS02655 PF12798 4Fe-4S binding domain KJS28_RS02665 PF00155 Aminotransferase class I and II KJS28_RS02670 PF00106 short chain dehydrogenase KJS28_RS02675 PF14748 Pyrroline-5-carboxylate reductase dimerisation KJS28_RS02675 PF03807 NADP oxidoreductase coenzyme F420-dependent KJS28_RS02680 PF02915 Rubrerythrin KJS28_RS02685 PF01226 Formate/nitrite transporter KJS28_RS02700 PF03575 Peptidase family S51 KJS28_RS02705 PF00375 Sodium:dicarboxylate symporter family KJS28_RS02730 PF03772 Competence protein KJS28_RS02730 PF13567 Domain of unknown function (DUF4131) KJS28_RS02730 PF00753 Metallo-beta-lactamase superfamily KJS28_RS02740 PF13331 Domain of unknown function (DUF4093) KJS28_RS02740 PF01751 Toprim domain KJS28_RS02750 PF04607 Region found in RelA / SpoT proteins KJS28_RS02755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KJS28_RS02755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KJS28_RS02765 PF00266 Aminotransferase class-V KJS28_RS02770 PF01926 50S ribosome-binding GTPase KJS28_RS02775 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS02775 PF05362 Lon protease (S16) C-terminal proteolytic domain KJS28_RS02775 PF02190 ATP-dependent protease La (LON) substrate-binding domain KJS28_RS02780 PF07724 AAA domain (Cdc48 subfamily) KJS28_RS02780 PF10431 C-terminal, D2-small domain, of ClpB protein KJS28_RS02780 PF06689 ClpX C4-type zinc finger KJS28_RS02785 PF00574 Clp protease KJS28_RS02790 PF05698 Bacterial trigger factor protein (TF) C-terminus KJS28_RS02790 PF05697 Bacterial trigger factor protein (TF) KJS28_RS02790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJS28_RS02800 PF01244 Membrane dipeptidase (Peptidase family M19) KJS28_RS02805 PF02021 Uncharacterised protein family UPF0102 KJS28_RS02810 PF01351 Ribonuclease HII KJS28_RS02815 PF01926 50S ribosome-binding GTPase KJS28_RS02830 PF00183 Hsp90 protein KJS28_RS02845 PF01979 Amidohydrolase family KJS28_RS02850 PF00149 Calcineurin-like phosphoesterase KJS28_RS02850 PF02872 5'-nucleotidase, C-terminal domain KJS28_RS02855 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS02855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KJS28_RS02860 PF01979 Amidohydrolase family KJS28_RS02870 PF00814 Glycoprotease family KJS28_RS02875 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KJS28_RS02880 PF00398 Ribosomal RNA adenine dimethylase KJS28_RS02895 PF04055 Radical SAM superfamily KJS28_RS02895 PF13186 Iron-sulfur cluster-binding domain KJS28_RS02900 PF01276 Orn/Lys/Arg decarboxylase, major domain KJS28_RS02900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KJS28_RS02920 PF03477 ATP cone domain KJS28_RS02920 PF13597 Anaerobic ribonucleoside-triphosphate reductase KJS28_RS02930 PF01235 Sodium:alanine symporter family KJS28_RS02935 PF00842 Alanine racemase, C-terminal domain KJS28_RS02935 PF01168 Alanine racemase, N-terminal domain KJS28_RS02945 PF02829 3H domain KJS28_RS02945 PF08279 HTH domain KJS28_RS02955 PF00877 NlpC/P60 family KJS28_RS02960 PF01268 Formate--tetrahydrofolate ligase KJS28_RS02965 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KJS28_RS02965 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KJS28_RS02970 PF01790 Prolipoprotein diacylglyceryl transferase KJS28_RS02980 PF00675 Insulinase (Peptidase family M16) KJS28_RS02980 PF05193 Peptidase M16 inactive domain KJS28_RS02985 PF05193 Peptidase M16 inactive domain KJS28_RS02990 PF01136 Peptidase family U32 KJS28_RS02990 PF16325 Peptidase family U32 C-terminal domain KJS28_RS03000 PF02223 Thymidylate kinase KJS28_RS03005 PF13419 Haloacid dehalogenase-like hydrolase KJS28_RS03010 PF00753 Metallo-beta-lactamase superfamily KJS28_RS03015 PF00696 Amino acid kinase family KJS28_RS03020 PF01765 Ribosome recycling factor KJS28_RS03025 PF01255 Putative undecaprenyl diphosphate synthase KJS28_RS03035 PF13288 DXP reductoisomerase C-terminal domain KJS28_RS03035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KJS28_RS03035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KJS28_RS03040 PF17820 PDZ domain KJS28_RS03040 PF02163 Peptidase family M50 KJS28_RS03045 PF04551 GcpE protein KJS28_RS03050 PF11490 DNA polymerase III polC-type N-terminus II KJS28_RS03050 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJS28_RS03050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJS28_RS03050 PF14579 Helix-hairpin-helix motif KJS28_RS03050 PF02811 PHP domain KJS28_RS03050 PF00929 Exonuclease KJS28_RS03055 PF01648 4'-phosphopantetheinyl transferase superfamily KJS28_RS03065 PF00318 Ribosomal protein S2 KJS28_RS03070 PF00889 Elongation factor TS KJS28_RS03075 PF00830 Ribosomal L28 family KJS28_RS03080 PF02603 HPr Serine kinase N terminus KJS28_RS03080 PF07475 HPr Serine kinase C-terminal domain KJS28_RS03085 PF00480 ROK family KJS28_RS03090 PF01565 FAD binding domain KJS28_RS03090 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KJS28_RS03095 PF03668 P-loop ATPase protein family KJS28_RS03100 PF01933 Uncharacterised protein family UPF0052 KJS28_RS03105 PF02650 WhiA C-terminal HTH domain KJS28_RS03105 PF14527 WhiA LAGLIDADG-like domain KJS28_RS03105 PF10298 WhiA N-terminal LAGLIDADG-like domain KJS28_RS03115 PF01336 OB-fold nucleic acid binding domain KJS28_RS03115 PF02811 PHP domain KJS28_RS03115 PF07733 Bacterial DNA polymerase III alpha NTPase domain KJS28_RS03115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KJS28_RS03115 PF14579 Helix-hairpin-helix motif KJS28_RS03155 PF01979 Amidohydrolase family KJS28_RS03165 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS03165 PF07702 UTRA domain KJS28_RS03170 PF00005 ABC transporter KJS28_RS03175 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS03185 PF02608 ABC transporter substrate-binding protein PnrA-like KJS28_RS03195 PF01081 KDPG and KHG aldolase KJS28_RS03200 PF00294 pfkB family carbohydrate kinase KJS28_RS03205 PF00155 Aminotransferase class I and II KJS28_RS03225 PF00589 Phage integrase family KJS28_RS03225 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS03235 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS03235 PF00589 Phage integrase family KJS28_RS03245 PF00485 Phosphoribulokinase / Uridine kinase family KJS28_RS03250 PF01121 Dephospho-CoA kinase KJS28_RS03255 PF00106 short chain dehydrogenase KJS28_RS03260 PF01740 STAS domain KJS28_RS03260 PF00916 Sulfate permease family KJS28_RS03275 PF00583 Acetyltransferase (GNAT) family KJS28_RS03305 PF04327 Cysteine protease Prp KJS28_RS03355 PF01381 Helix-turn-helix KJS28_RS03365 PF04439 Streptomycin adenylyltransferase KJS28_RS03395 PF01076 Plasmid recombination enzyme KJS28_RS03420 PF08439 Oligopeptidase F KJS28_RS03420 PF01432 Peptidase family M3 KJS28_RS03425 PF06470 SMC proteins Flexible Hinge Domain KJS28_RS03425 PF02463 RecF/RecN/SMC N terminal domain KJS28_RS03430 PF00448 SRP54-type protein, GTPase domain KJS28_RS03430 PF02881 SRP54-type protein, helical bundle domain KJS28_RS03435 PF01138 3' exoribonuclease family, domain 1 KJS28_RS03435 PF03725 3' exoribonuclease family, domain 2 KJS28_RS03440 PF01725 Ham1 family KJS28_RS03445 PF01985 CRS1 / YhbY (CRM) domain KJS28_RS03450 PF01966 HD domain KJS28_RS03460 PF00133 tRNA synthetases class I (I, L, M and V) KJS28_RS03460 PF13603 Leucyl-tRNA synthetase, Domain 2 KJS28_RS03460 PF09334 tRNA synthetases class I (M) KJS28_RS03460 PF08264 Anticodon-binding domain of tRNA KJS28_RS03470 PF01165 Ribosomal protein S21 KJS28_RS03485 PF01132 Elongation factor P (EF-P) OB domain KJS28_RS03485 PF08207 Elongation factor P (EF-P) KOW-like domain KJS28_RS03485 PF09285 Elongation factor P, C-terminal KJS28_RS03500 PF00128 Alpha amylase, catalytic domain KJS28_RS03500 PF02806 Alpha amylase, C-terminal all-beta domain KJS28_RS03500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KJS28_RS03505 PF00132 Bacterial transferase hexapeptide (six repeats) KJS28_RS03505 PF00483 Nucleotidyl transferase KJS28_RS03510 PF00483 Nucleotidyl transferase KJS28_RS03515 PF08323 Starch synthase catalytic domain KJS28_RS03515 PF00534 Glycosyl transferases group 1 KJS28_RS03520 PF00343 Carbohydrate phosphorylase KJS28_RS03525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KJS28_RS03525 PF05698 Bacterial trigger factor protein (TF) C-terminus KJS28_RS03525 PF05697 Bacterial trigger factor protein (TF) KJS28_RS03540 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KJS28_RS03540 PF00175 Oxidoreductase NAD-binding domain KJS28_RS03545 PF13247 4Fe-4S dicluster domain KJS28_RS03545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KJS28_RS03545 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS03560 PF00145 C-5 cytosine-specific DNA methylase KJS28_RS03615 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS03620 PF00072 Response regulator receiver domain KJS28_RS03620 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS03635 PF00361 Proton-conducting membrane transporter KJS28_RS03640 PF00361 Proton-conducting membrane transporter KJS28_RS03645 PF13244 Domain of unknown function (DUF4040) KJS28_RS03645 PF00361 Proton-conducting membrane transporter KJS28_RS03645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KJS28_RS03650 PF00361 Proton-conducting membrane transporter KJS28_RS03680 PF01899 Na+/H+ ion antiporter subunit KJS28_RS03695 PF03062 MBOAT, membrane-bound O-acyltransferase family KJS28_RS03710 PF04542 Sigma-70 region 2 KJS28_RS03710 PF04539 Sigma-70 region 3 KJS28_RS03710 PF04545 Sigma-70, region 4 KJS28_RS03715 PF01592 NifU-like N terminal domain KJS28_RS03720 PF00266 Aminotransferase class-V KJS28_RS03725 PF00636 Ribonuclease III domain KJS28_RS03730 PF05670 NFACT protein RNA binding domain KJS28_RS03740 PF02779 Transketolase, pyrimidine binding domain KJS28_RS03740 PF02780 Transketolase, C-terminal domain KJS28_RS03740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KJS28_RS03745 PF01479 S4 domain KJS28_RS03745 PF01728 FtsJ-like methyltransferase KJS28_RS03750 PF01513 ATP-NAD kinase KJS28_RS03755 PF01316 Arginine repressor, DNA binding domain KJS28_RS03755 PF02863 Arginine repressor, C-terminal domain KJS28_RS03760 PF13476 AAA domain KJS28_RS03765 PF00579 tRNA synthetases class I (W and Y) KJS28_RS03770 PF08544 GHMP kinases C terminal KJS28_RS03770 PF00288 GHMP kinases N terminal domain KJS28_RS03795 PF13344 Haloacid dehalogenase-like hydrolase KJS28_RS03800 PF12705 PD-(D/E)XK nuclease superfamily KJS28_RS03805 PF12705 PD-(D/E)XK nuclease superfamily KJS28_RS03805 PF00580 UvrD/REP helicase N-terminal domain KJS28_RS03805 PF13361 UvrD-like helicase C-terminal domain KJS28_RS03810 PF01197 Ribosomal protein L31 KJS28_RS03815 PF16360 GTP-binding GTPase Middle Region KJS28_RS03815 PF13167 GTP-binding GTPase N-terminal KJS28_RS03815 PF01926 50S ribosome-binding GTPase KJS28_RS03825 PF09186 Domain of unknown function (DUF1949) KJS28_RS03825 PF01205 Uncharacterized protein family UPF0029 KJS28_RS03845 PF07687 Peptidase dimerisation domain KJS28_RS03845 PF01546 Peptidase family M20/M25/M40 KJS28_RS03855 PF02660 Glycerol-3-phosphate acyltransferase KJS28_RS03860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KJS28_RS03860 PF01926 50S ribosome-binding GTPase KJS28_RS03865 PF02163 Peptidase family M50 KJS28_RS03865 PF17820 PDZ domain KJS28_RS03870 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KJS28_RS03875 PF00448 SRP54-type protein, GTPase domain KJS28_RS03875 PF02881 SRP54-type protein, helical bundle domain KJS28_RS03875 PF02978 Signal peptide binding domain KJS28_RS03880 PF00886 Ribosomal protein S16 KJS28_RS03890 PF01432 Peptidase family M3 KJS28_RS03890 PF08439 Oligopeptidase F KJS28_RS03900 PF05067 Manganese containing catalase KJS28_RS03905 PF00365 Phosphofructokinase KJS28_RS03910 PF01116 Fructose-bisphosphate aldolase class-II KJS28_RS03920 PF00365 Phosphofructokinase KJS28_RS03935 PF00005 ABC transporter KJS28_RS03945 PF01098 Cell cycle protein KJS28_RS03950 PF07478 D-ala D-ala ligase C-terminus KJS28_RS03950 PF01820 D-ala D-ala ligase N-terminus KJS28_RS03955 PF01225 Mur ligase family, catalytic domain KJS28_RS03955 PF02875 Mur ligase family, glutamate ligase domain KJS28_RS03955 PF08245 Mur ligase middle domain KJS28_RS03960 PF00005 ABC transporter KJS28_RS03960 PF16326 ABC transporter C-terminal domain KJS28_RS03960 PF12848 ABC transporter KJS28_RS03970 PF03462 PCRF domain KJS28_RS03970 PF00472 RF-1 domain KJS28_RS03980 PF03481 Putative GTP-binding controlling metal-binding KJS28_RS03980 PF01300 Telomere recombination KJS28_RS03985 PF02127 Aminopeptidase I zinc metalloprotease (M18) KJS28_RS04000 PF01554 MatE KJS28_RS04015 PF02075 Crossover junction endodeoxyribonuclease RuvC KJS28_RS04020 PF07499 RuvA, C-terminal domain KJS28_RS04020 PF01330 RuvA N terminal domain KJS28_RS04025 PF17864 RuvB AAA lid domain KJS28_RS04025 PF05491 RuvB C-terminal winged helix domain KJS28_RS04025 PF05496 Holliday junction DNA helicase RuvB P-loop domain KJS28_RS04030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJS28_RS04030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJS28_RS04030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJS28_RS04030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJS28_RS04035 PF04542 Sigma-70 region 2 KJS28_RS04035 PF08281 Sigma-70, region 4 KJS28_RS04050 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KJS28_RS04055 PF01784 NIF3 (NGG1p interacting factor 3) KJS28_RS04060 PF01709 Transcriptional regulator KJS28_RS04065 PF13344 Haloacid dehalogenase-like hydrolase KJS28_RS04065 PF00293 NUDIX domain KJS28_RS04070 PF02779 Transketolase, pyrimidine binding domain KJS28_RS04070 PF02780 Transketolase, C-terminal domain KJS28_RS04075 PF00456 Transketolase, thiamine diphosphate binding domain KJS28_RS04080 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS04080 PF00589 Phage integrase family KJS28_RS04085 PF01520 N-acetylmuramoyl-L-alanine amidase KJS28_RS04090 PF18073 Rubredoxin metal binding domain KJS28_RS04105 PF00580 UvrD/REP helicase N-terminal domain KJS28_RS04105 PF13361 UvrD-like helicase C-terminal domain KJS28_RS04120 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS04120 PF00589 Phage integrase family KJS28_RS04130 PF01757 Acyltransferase family KJS28_RS04130 PF00842 Alanine racemase, C-terminal domain KJS28_RS04130 PF01168 Alanine racemase, N-terminal domain KJS28_RS04135 PF02557 D-alanyl-D-alanine carboxypeptidase KJS28_RS04140 PF07478 D-ala D-ala ligase C-terminus KJS28_RS04140 PF01820 D-ala D-ala ligase N-terminus KJS28_RS04145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS04145 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS04150 PF00072 Response regulator receiver domain KJS28_RS04150 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS04255 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KJS28_RS04275 PF01594 AI-2E family transporter KJS28_RS04285 PF04101 Glycosyltransferase family 28 C-terminal domain KJS28_RS04285 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KJS28_RS04295 PF13091 PLD-like domain KJS28_RS04325 PF02796 Helix-turn-helix domain of resolvase KJS28_RS04325 PF00239 Resolvase, N terminal domain KJS28_RS04375 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KJS28_RS04380 PF00440 Bacterial regulatory proteins, tetR family KJS28_RS04385 PF09547 Stage IV sporulation protein A (spore_IV_A) KJS28_RS04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJS28_RS04400 PF03466 LysR substrate binding domain KJS28_RS04405 PF03309 Type III pantothenate kinase KJS28_RS04410 PF04542 Sigma-70 region 2 KJS28_RS04410 PF04539 Sigma-70 region 3 KJS28_RS04410 PF04545 Sigma-70, region 4 KJS28_RS04415 PF13581 Histidine kinase-like ATPase domain KJS28_RS04420 PF01740 STAS domain KJS28_RS04425 PF08264 Anticodon-binding domain of tRNA KJS28_RS04425 PF00133 tRNA synthetases class I (I, L, M and V) KJS28_RS04425 PF10458 Valyl tRNA synthetase tRNA binding arm KJS28_RS04435 PF01554 MatE KJS28_RS04440 PF02401 LytB protein KJS28_RS04440 PF00575 S1 RNA binding domain KJS28_RS04450 PF02224 Cytidylate kinase KJS28_RS04460 PF01418 Helix-turn-helix domain, rpiR family KJS28_RS04460 PF01380 SIS domain KJS28_RS04465 PF01479 S4 domain KJS28_RS04465 PF00849 RNA pseudouridylate synthase KJS28_RS04470 PF07943 Penicillin-binding protein 5, C-terminal domain KJS28_RS04470 PF00768 D-alanyl-D-alanine carboxypeptidase KJS28_RS04475 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KJS28_RS04485 PF04079 Segregation and condensation complex subunit ScpB KJS28_RS04490 PF02616 Segregation and condensation protein ScpA KJS28_RS04495 PF02163 Peptidase family M50 KJS28_RS04505 PF04545 Sigma-70, region 4 KJS28_RS04505 PF04542 Sigma-70 region 2 KJS28_RS04515 PF06107 Bacterial protein of unknown function (DUF951) KJS28_RS04525 PF05496 Holliday junction DNA helicase RuvB P-loop domain KJS28_RS04525 PF12002 MgsA AAA+ ATPase C terminal KJS28_RS04525 PF16193 AAA C-terminal domain KJS28_RS04530 PF00730 HhH-GPD superfamily base excision DNA repair protein KJS28_RS04530 PF00633 Helix-hairpin-helix motif KJS28_RS04555 PF00589 Phage integrase family KJS28_RS04555 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS04575 PF01702 Queuine tRNA-ribosyltransferase KJS28_RS04580 PF02547 Queuosine biosynthesis protein KJS28_RS04600 PF04070 Domain of unknown function (DUF378) KJS28_RS04605 PF01746 tRNA (Guanine-1)-methyltransferase KJS28_RS04610 PF01782 RimM N-terminal domain KJS28_RS04610 PF05239 PRC-barrel domain KJS28_RS04615 PF06725 3D domain KJS28_RS04620 PF01207 Dihydrouridine synthase (Dus) KJS28_RS04625 PF01541 GIY-YIG catalytic domain KJS28_RS04635 PF06838 Methionine gamma-lyase KJS28_RS04640 PF13091 PLD-like domain KJS28_RS04645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KJS28_RS04645 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KJS28_RS04645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KJS28_RS04650 PF02773 S-adenosylmethionine synthetase, C-terminal domain KJS28_RS04650 PF02772 S-adenosylmethionine synthetase, central domain KJS28_RS04650 PF00438 S-adenosylmethionine synthetase, N-terminal domain KJS28_RS04660 PF07693 KAP family P-loop domain KJS28_RS04665 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS04665 PF00589 Phage integrase family KJS28_RS04670 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS04670 PF00589 Phage integrase family KJS28_RS04675 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS04735 PF02086 D12 class N6 adenine-specific DNA methyltransferase KJS28_RS04765 PF05525 Branched-chain amino acid transport protein KJS28_RS04770 PF03749 Sugar fermentation stimulation protein RE domain KJS28_RS04770 PF17746 SfsA N-terminal OB domain KJS28_RS04785 PF03960 ArsC family KJS28_RS04820 PF01979 Amidohydrolase family KJS28_RS04820 PF13382 Adenine deaminase C-terminal domain KJS28_RS04825 PF00156 Phosphoribosyl transferase domain KJS28_RS04830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KJS28_RS04830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KJS28_RS04835 PF01569 PAP2 superfamily KJS28_RS04845 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJS28_RS04855 PF18318 Glutamine synthetase C-terminal domain KJS28_RS04855 PF12437 Glutamine synthetase type III N terminal KJS28_RS04855 PF00120 Glutamine synthetase, catalytic domain KJS28_RS04875 PF00248 Aldo/keto reductase family KJS28_RS04880 PF02627 Carboxymuconolactone decarboxylase family KJS28_RS04885 PF13411 MerR HTH family regulatory protein KJS28_RS04890 PF05525 Branched-chain amino acid transport protein KJS28_RS04895 PF12850 Calcineurin-like phosphoesterase superfamily domain KJS28_RS04900 PF00037 4Fe-4S binding domain KJS28_RS04900 PF02256 Iron hydrogenase small subunit KJS28_RS04900 PF02906 Iron only hydrogenase large subunit, C-terminal domain KJS28_RS04900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KJS28_RS04905 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS04905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region KJS28_RS04905 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KJS28_RS04910 PF02386 Cation transport protein KJS28_RS04930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJS28_RS04935 PF00753 Metallo-beta-lactamase superfamily KJS28_RS04940 PF02590 Predicted SPOUT methyltransferase KJS28_RS04950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KJS28_RS04950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KJS28_RS04950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KJS28_RS04950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KJS28_RS04965 PF00005 ABC transporter KJS28_RS04965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS04970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS04970 PF00005 ABC transporter KJS28_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS04985 PF07969 Amidohydrolase family KJS28_RS04990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS05010 PF08245 Mur ligase middle domain KJS28_RS05010 PF01225 Mur ligase family, catalytic domain KJS28_RS05010 PF02875 Mur ligase family, glutamate ligase domain KJS28_RS05015 PF02645 Uncharacterised protein, DegV family COG1307 KJS28_RS05065 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KJS28_RS05070 PF02583 Metal-sensitive transcriptional repressor KJS28_RS05075 PF00403 Heavy-metal-associated domain KJS28_RS05080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS05085 PF00270 DEAD/DEAH box helicase KJS28_RS05085 PF00271 Helicase conserved C-terminal domain KJS28_RS05105 PF14821 Threonine synthase N terminus KJS28_RS05105 PF00291 Pyridoxal-phosphate dependent enzyme KJS28_RS05110 PF00696 Amino acid kinase family KJS28_RS05110 PF13840 ACT domain KJS28_RS05115 PF01118 Semialdehyde dehydrogenase, NAD binding domain KJS28_RS05115 PF02774 Semialdehyde dehydrogenase, dimerisation domain KJS28_RS05125 PF00005 ABC transporter KJS28_RS05130 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJS28_RS05135 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS05140 PF00005 ABC transporter KJS28_RS05155 PF03193 RsgA GTPase KJS28_RS05155 PF16745 RsgA N-terminal domain KJS28_RS05160 PF03793 PASTA domain KJS28_RS05160 PF00069 Protein kinase domain KJS28_RS05170 PF04055 Radical SAM superfamily KJS28_RS05175 PF01189 16S rRNA methyltransferase RsmB/F KJS28_RS05175 PF01029 NusB family KJS28_RS05180 PF02911 Formyl transferase, C-terminal domain KJS28_RS05180 PF00551 Formyl transferase KJS28_RS05185 PF01327 Polypeptide deformylase KJS28_RS05190 PF17764 3′ DNA-binding domain (3′BD) KJS28_RS05190 PF18074 Primosomal protein N C-terminal domain KJS28_RS05190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KJS28_RS05190 PF04851 Type III restriction enzyme, res subunit KJS28_RS05190 PF00271 Helicase conserved C-terminal domain KJS28_RS05195 PF01192 RNA polymerase Rpb6 KJS28_RS05200 PF00625 Guanylate kinase KJS28_RS05205 PF04025 Domain of unknown function (DUF370) KJS28_RS05210 PF08340 Domain of unknown function (DUF1732) KJS28_RS05210 PF03755 YicC-like family, N-terminal region KJS28_RS05215 PF00226 DnaJ domain KJS28_RS05215 PF01556 DnaJ C terminal domain KJS28_RS05215 PF00684 DnaJ central domain KJS28_RS05235 PF02457 DisA bacterial checkpoint controller nucleotide-binding KJS28_RS05240 PF13360 PQQ-like domain KJS28_RS05240 PF13570 PQQ-like domain KJS28_RS05240 PF01011 PQQ enzyme repeat KJS28_RS05240 PF00069 Protein kinase domain KJS28_RS05260 PF00069 Protein kinase domain KJS28_RS05260 PF03793 PASTA domain KJS28_RS05320 PF00437 Type II/IV secretion system protein KJS28_RS05335 PF00589 Phage integrase family KJS28_RS05335 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS05370 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KJS28_RS05380 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) KJS28_RS05380 PF12733 Cadherin-like beta sandwich domain KJS28_RS05430 PF13614 AAA domain KJS28_RS05455 PF02195 ParB-like nuclease domain KJS28_RS05455 PF17762 HTH domain found in ParB protein KJS28_RS05465 PF00436 Single-strand binding protein family KJS28_RS05545 PF13362 Toprim domain KJS28_RS05545 PF08401 Domain of unknown function (DUF1738) KJS28_RS05545 PF18818 Metallopeptidase superfamily domain KJS28_RS05555 PF02796 Helix-turn-helix domain of resolvase KJS28_RS05555 PF00239 Resolvase, N terminal domain KJS28_RS05565 PF09515 Thiamine transporter protein (Thia_YuaJ) KJS28_RS05600 PF00293 NUDIX domain KJS28_RS05605 PF02645 Uncharacterised protein, DegV family COG1307 KJS28_RS05615 PF02659 Putative manganese efflux pump KJS28_RS05620 PF03590 Aspartate-ammonia ligase KJS28_RS05625 PF00155 Aminotransferase class I and II KJS28_RS05640 PF05437 Branched-chain amino acid transport protein (AzlD) KJS28_RS05645 PF03591 AzlC protein KJS28_RS05655 PF01545 Cation efflux family KJS28_RS05655 PF16916 Dimerisation domain of Zinc Transporter KJS28_RS05665 PF02146 Sir2 family KJS28_RS05705 PF13419 Haloacid dehalogenase-like hydrolase KJS28_RS05715 PF10431 C-terminal, D2-small domain, of ClpB protein KJS28_RS05715 PF02861 Clp amino terminal domain, pathogenicity island component KJS28_RS05715 PF17871 AAA lid domain KJS28_RS05715 PF07724 AAA domain (Cdc48 subfamily) KJS28_RS05715 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS05730 PF01416 tRNA pseudouridine synthase KJS28_RS05735 PF02361 Cobalt transport protein KJS28_RS05740 PF00005 ABC transporter KJS28_RS05745 PF00005 ABC transporter KJS28_RS05755 PF10672 S-adenosylmethionine-dependent methyltransferase KJS28_RS05755 PF02926 THUMP domain KJS28_RS05755 PF01170 Putative RNA methylase family UPF0020 KJS28_RS05765 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS05765 PF00072 Response regulator receiver domain KJS28_RS05775 PF02677 Epoxyqueuosine reductase QueH KJS28_RS05780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KJS28_RS05780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KJS28_RS05785 PF11896 Domain of unknown function (DUF3416) KJS28_RS05790 PF00533 BRCA1 C Terminus (BRCT) domain KJS28_RS05790 PF01653 NAD-dependent DNA ligase adenylation domain KJS28_RS05790 PF12826 Helix-hairpin-helix motif KJS28_RS05790 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KJS28_RS05790 PF03120 NAD-dependent DNA ligase OB-fold domain KJS28_RS05795 PF09560 Sporulation protein YunB (Spo_YunB) KJS28_RS05800 PF08245 Mur ligase middle domain KJS28_RS05815 PF01293 Phosphoenolpyruvate carboxykinase KJS28_RS05820 PF02769 AIR synthase related protein, C-terminal domain KJS28_RS05820 PF00586 AIR synthase related protein, N-terminal domain KJS28_RS05825 PF02625 XdhC and CoxI family KJS28_RS05825 PF13478 XdhC Rossmann domain KJS28_RS05835 PF00266 Aminotransferase class-V KJS28_RS05845 PF02542 YgbB family KJS28_RS05850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KJS28_RS05855 PF02559 CarD-like/TRCF domain KJS28_RS05860 PF00291 Pyridoxal-phosphate dependent enzyme KJS28_RS05885 PF07687 Peptidase dimerisation domain KJS28_RS05885 PF01546 Peptidase family M20/M25/M40 KJS28_RS05890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJS28_RS05890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJS28_RS05895 PF00696 Amino acid kinase family KJS28_RS05905 PF00005 ABC transporter KJS28_RS05915 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS05920 PF01979 Amidohydrolase family KJS28_RS05930 PF01661 Macro domain KJS28_RS05940 PF00849 RNA pseudouridylate synthase KJS28_RS05960 PF00117 Glutamine amidotransferase class-I KJS28_RS05960 PF06418 CTP synthase N-terminus KJS28_RS05965 PF18152 DAHP synthase ferredoxin-like domain KJS28_RS05965 PF00793 DAHP synthetase I family KJS28_RS05970 PF02645 Uncharacterised protein, DegV family COG1307 KJS28_RS05975 PF02645 Uncharacterised protein, DegV family COG1307 KJS28_RS05980 PF02082 Transcriptional regulator KJS28_RS05990 PF00111 2Fe-2S iron-sulfur cluster binding domain KJS28_RS05990 PF01799 [2Fe-2S] binding domain KJS28_RS05995 PF03450 CO dehydrogenase flavoprotein C-terminal domain KJS28_RS05995 PF00941 FAD binding domain in molybdopterin dehydrogenase KJS28_RS06000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KJS28_RS06000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KJS28_RS06020 PF02272 DHHA1 domain KJS28_RS06020 PF01411 tRNA synthetases class II (A) KJS28_RS06020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJS28_RS06025 PF01230 HIT domain KJS28_RS06040 PF01272 Transcription elongation factor, GreA/GreB, C-term KJS28_RS06040 PF03449 Transcription elongation factor, N-terminal KJS28_RS06045 PF00155 Aminotransferase class I and II KJS28_RS06045 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS06055 PF04260 Protein of unknown function (DUF436) KJS28_RS06060 PF03600 Citrate transporter KJS28_RS06070 PF01012 Electron transfer flavoprotein domain KJS28_RS06070 PF00766 Electron transfer flavoprotein FAD-binding domain KJS28_RS06075 PF01012 Electron transfer flavoprotein domain KJS28_RS06080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJS28_RS06080 PF02770 Acyl-CoA dehydrogenase, middle domain KJS28_RS06080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJS28_RS06085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJS28_RS06085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJS28_RS06090 PF00378 Enoyl-CoA hydratase/isomerase KJS28_RS06095 PF02390 Putative methyltransferase KJS28_RS06100 PF00258 Flavodoxin KJS28_RS06100 PF00753 Metallo-beta-lactamase superfamily KJS28_RS06100 PF00301 Rubredoxin KJS28_RS06105 PF00453 Ribosomal protein L20 KJS28_RS06110 PF01632 Ribosomal protein L35 KJS28_RS06115 PF05198 Translation initiation factor IF-3, N-terminal domain KJS28_RS06115 PF00707 Translation initiation factor IF-3, C-terminal domain KJS28_RS06125 PF02557 D-alanyl-D-alanine carboxypeptidase KJS28_RS06135 PF03816 Cell envelope-related transcriptional attenuator domain KJS28_RS06140 PF03816 Cell envelope-related transcriptional attenuator domain KJS28_RS06145 PF00892 EamA-like transporter family KJS28_RS06160 PF00860 Permease family KJS28_RS06165 PF13382 Adenine deaminase C-terminal domain KJS28_RS06165 PF01979 Amidohydrolase family KJS28_RS06170 PF01979 Amidohydrolase family KJS28_RS06190 PF01144 Coenzyme A transferase KJS28_RS06195 PF01144 Coenzyme A transferase KJS28_RS06200 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase KJS28_RS06200 PF02310 B12 binding domain KJS28_RS06205 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit KJS28_RS06210 PF04055 Radical SAM superfamily KJS28_RS06210 PF12544 Lysine-2,3-aminomutase KJS28_RS06220 PF05853 beta-keto acid cleavage enzyme KJS28_RS06225 PF03061 Thioesterase superfamily KJS28_RS06230 PF00488 MutS domain V KJS28_RS06230 PF01713 Smr domain KJS28_RS06240 PF01367 5'-3' exonuclease, C-terminal SAM fold KJS28_RS06240 PF00476 DNA polymerase family A KJS28_RS06240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KJS28_RS06250 PF00814 Glycoprotease family KJS28_RS06275 PF05979 Bacterial protein of unknown function (DUF896) KJS28_RS06280 PF01479 S4 domain KJS28_RS06280 PF17774 Putative RNA-binding domain in YlmH KJS28_RS06285 PF00664 ABC transporter transmembrane region KJS28_RS06285 PF00005 ABC transporter KJS28_RS06295 PF02690 Na+/Pi-cotransporter KJS28_RS06310 PF01496 V-type ATPase 116kDa subunit family KJS28_RS06315 PF00137 ATP synthase subunit C KJS28_RS06330 PF01990 ATP synthase (F/14-kDa) subunit KJS28_RS06335 PF16886 ATPsynthase alpha/beta subunit N-term extension KJS28_RS06335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJS28_RS06335 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJS28_RS06340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KJS28_RS06340 PF02874 ATP synthase alpha/beta family, beta-barrel domain KJS28_RS06345 PF01813 ATP synthase subunit D KJS28_RS06370 PF00269 Small, acid-soluble spore proteins, alpha/beta type KJS28_RS06400 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS06405 PF12799 Leucine Rich repeats (2 copies) KJS28_RS06405 PF08191 LRR adjacent KJS28_RS06405 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) KJS28_RS06405 PF00746 LPXTG cell wall anchor motif KJS28_RS06405 PF12354 Bacterial adhesion/invasion protein N terminal KJS28_RS06410 PF06280 Fn3-like domain KJS28_RS06410 PF00746 LPXTG cell wall anchor motif KJS28_RS06410 PF02225 PA domain KJS28_RS06410 PF00082 Subtilase family KJS28_RS06415 PF08359 YsiA-like protein, C-terminal region KJS28_RS06415 PF00440 Bacterial regulatory proteins, tetR family KJS28_RS06430 PF00574 Clp protease KJS28_RS06445 PF14268 YoaP-like KJS28_RS06445 PF00583 Acetyltransferase (GNAT) family KJS28_RS06455 PF00239 Resolvase, N terminal domain KJS28_RS06455 PF02796 Helix-turn-helix domain of resolvase KJS28_RS06525 PF01695 IstB-like ATP binding protein KJS28_RS06555 PF04545 Sigma-70, region 4 KJS28_RS06555 PF04539 Sigma-70 region 3 KJS28_RS06555 PF04542 Sigma-70 region 2 KJS28_RS06560 PF08241 Methyltransferase domain KJS28_RS06565 PF14492 Elongation Factor G, domain II KJS28_RS06565 PF00009 Elongation factor Tu GTP binding domain KJS28_RS06565 PF03764 Elongation factor G, domain IV KJS28_RS06565 PF00679 Elongation factor G C-terminus KJS28_RS06580 PF00072 Response regulator receiver domain KJS28_RS06580 PF00196 Bacterial regulatory proteins, luxR family KJS28_RS06585 PF01842 ACT domain KJS28_RS06585 PF03315 Serine dehydratase beta chain KJS28_RS06590 PF03313 Serine dehydratase alpha chain KJS28_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS06600 PF09383 NIL domain KJS28_RS06600 PF00005 ABC transporter KJS28_RS06605 PF03180 NLPA lipoprotein KJS28_RS06615 PF04545 Sigma-70, region 4 KJS28_RS06615 PF04539 Sigma-70 region 3 KJS28_RS06615 PF04542 Sigma-70 region 2 KJS28_RS06615 PF00140 Sigma-70 factor, region 1.2 KJS28_RS06615 PF03979 Sigma-70 factor, region 1.1 KJS28_RS06620 PF01807 CHC2 zinc finger KJS28_RS06620 PF08275 DNA primase catalytic core, N-terminal domain KJS28_RS06620 PF10410 DnaB-helicase binding domain of primase KJS28_RS06625 PF08239 Bacterial SH3 domain KJS28_RS06625 PF01183 Glycosyl hydrolases family 25 KJS28_RS06635 PF01225 Mur ligase family, catalytic domain KJS28_RS06635 PF02875 Mur ligase family, glutamate ligase domain KJS28_RS06635 PF08245 Mur ligase middle domain KJS28_RS06650 PF01842 ACT domain KJS28_RS06655 PF08769 Sporulation initiation factor Spo0A C terminal KJS28_RS06655 PF00072 Response regulator receiver domain KJS28_RS06660 PF13382 Adenine deaminase C-terminal domain KJS28_RS06660 PF01979 Amidohydrolase family KJS28_RS06665 PF17820 PDZ domain KJS28_RS06665 PF05580 SpoIVB peptidase S55 KJS28_RS06675 PF00877 NlpC/P60 family KJS28_RS06680 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJS28_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS06690 PF00005 ABC transporter KJS28_RS06700 PF00834 Ribulose-phosphate 3 epimerase family KJS28_RS06705 PF02132 RecR protein KJS28_RS06705 PF13662 Toprim domain KJS28_RS06710 PF02424 ApbE family KJS28_RS06725 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS06725 PF17866 AAA lid domain KJS28_RS06730 PF00679 Elongation factor G C-terminus KJS28_RS06730 PF14492 Elongation Factor G, domain II KJS28_RS06730 PF00009 Elongation factor Tu GTP binding domain KJS28_RS06730 PF03144 Elongation factor Tu domain 2 KJS28_RS06740 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KJS28_RS06740 PF00749 tRNA synthetases class I (E and Q), catalytic domain KJS28_RS06755 PF13276 HTH-like domain KJS28_RS06755 PF00665 Integrase core domain KJS28_RS06755 PF13333 Integrase core domain KJS28_RS06790 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system KJS28_RS06835 PF00403 Heavy-metal-associated domain KJS28_RS06840 PF01554 MatE KJS28_RS06845 PF00571 CBS domain KJS28_RS06845 PF01368 DHH family KJS28_RS06845 PF02833 DHHA2 domain KJS28_RS06845 PF07085 DRTGG domain KJS28_RS06850 PF03641 Possible lysine decarboxylase KJS28_RS06855 PF01084 Ribosomal protein S18 KJS28_RS06860 PF00436 Single-strand binding protein family KJS28_RS06865 PF01250 Ribosomal protein S6 KJS28_RS06870 PF00588 SpoU rRNA Methylase family KJS28_RS06870 PF08032 RNA 2'-O ribose methyltransferase substrate binding KJS28_RS06875 PF02481 DNA recombination-mediator protein A KJS28_RS06880 PF01131 DNA topoisomerase KJS28_RS06880 PF01751 Toprim domain KJS28_RS06880 PF01396 Topoisomerase DNA binding C4 zinc finger KJS28_RS06885 PF01134 Glucose inhibited division protein A KJS28_RS06890 PF02504 Fatty acid synthesis protein KJS28_RS06895 PF00550 Phosphopantetheine attachment site KJS28_RS06900 PF00035 Double-stranded RNA binding motif KJS28_RS06900 PF14622 Ribonuclease-III-like KJS28_RS06905 PF13419 Haloacid dehalogenase-like hydrolase KJS28_RS06915 PF00589 Phage integrase family KJS28_RS06915 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS06925 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KJS28_RS06940 PF00216 Bacterial DNA-binding protein KJS28_RS06965 PF02082 Transcriptional regulator KJS28_RS06970 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS06970 PF00589 Phage integrase family KJS28_RS07040 PF00145 C-5 cytosine-specific DNA methylase KJS28_RS07110 PF02195 ParB-like nuclease domain KJS28_RS07110 PF17762 HTH domain found in ParB protein KJS28_RS07115 PF13614 AAA domain KJS28_RS07150 PF07726 ATPase family associated with various cellular activities (AAA) KJS28_RS07150 PF17863 AAA lid domain KJS28_RS07165 PF01554 MatE KJS28_RS07175 PF06130 Phosphate propanoyltransferase KJS28_RS07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJS28_RS07185 PF03466 LysR substrate binding domain KJS28_RS07190 PF00156 Phosphoribosyl transferase domain KJS28_RS07195 PF00117 Glutamine amidotransferase class-I KJS28_RS07195 PF02540 NAD synthase KJS28_RS07195 PF00958 GMP synthase C terminal domain KJS28_RS07200 PF00589 Phage integrase family KJS28_RS07200 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS07215 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KJS28_RS07215 PF14490 Helix-hairpin-helix containing domain KJS28_RS07215 PF13538 UvrD-like helicase C-terminal domain KJS28_RS07240 PF03120 NAD-dependent DNA ligase OB-fold domain KJS28_RS07240 PF00533 BRCA1 C Terminus (BRCT) domain KJS28_RS07240 PF01653 NAD-dependent DNA ligase adenylation domain KJS28_RS07240 PF12826 Helix-hairpin-helix motif KJS28_RS07290 PF00072 Response regulator receiver domain KJS28_RS07290 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS07295 PF04298 Putative neutral zinc metallopeptidase KJS28_RS07320 PF13091 PLD-like domain KJS28_RS07325 PF01594 AI-2E family transporter KJS28_RS07345 PF00664 ABC transporter transmembrane region KJS28_RS07345 PF00005 ABC transporter KJS28_RS07350 PF00664 ABC transporter transmembrane region KJS28_RS07350 PF00005 ABC transporter KJS28_RS07365 PF17862 AAA+ lid domain KJS28_RS07365 PF06480 FtsH Extracellular KJS28_RS07365 PF01434 Peptidase family M41 KJS28_RS07365 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS07370 PF01869 BadF/BadG/BcrA/BcrD ATPase family KJS28_RS07380 PF01553 Acyltransferase KJS28_RS07390 PF01066 CDP-alcohol phosphatidyltransferase KJS28_RS07400 PF02660 Glycerol-3-phosphate acyltransferase KJS28_RS07425 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS07425 PF00072 Response regulator receiver domain KJS28_RS07430 PF00672 HAMP domain KJS28_RS07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS07430 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS07435 PF00106 short chain dehydrogenase KJS28_RS07440 PF00753 Metallo-beta-lactamase superfamily KJS28_RS07530 PF00436 Single-strand binding protein family KJS28_RS07600 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer KJS28_RS07650 PF01371 Trp repressor protein KJS28_RS07655 PF13649 Methyltransferase domain KJS28_RS07660 PF01430 Hsp33 protein KJS28_RS07720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS07725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS07725 PF00005 ABC transporter KJS28_RS07730 PF00005 ABC transporter KJS28_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS07735 PF12911 N-terminal TM domain of oligopeptide transport permease C KJS28_RS07740 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS07745 PF00005 ABC transporter KJS28_RS07745 PF00664 ABC transporter transmembrane region KJS28_RS07750 PF00005 ABC transporter KJS28_RS07750 PF00664 ABC transporter transmembrane region KJS28_RS07755 PF06445 GyrI-like small molecule binding domain KJS28_RS07755 PF12833 Helix-turn-helix domain KJS28_RS07775 PF08361 MAATS-type transcriptional repressor, C-terminal region KJS28_RS07775 PF00440 Bacterial regulatory proteins, tetR family KJS28_RS07780 PF01209 ubiE/COQ5 methyltransferase family KJS28_RS07790 PF04072 Leucine carboxyl methyltransferase KJS28_RS07805 PF16123 Hydroxyacylglutathione hydrolase C-terminus KJS28_RS07805 PF00753 Metallo-beta-lactamase superfamily KJS28_RS07840 PF12833 Helix-turn-helix domain KJS28_RS07850 PF00664 ABC transporter transmembrane region KJS28_RS07850 PF00005 ABC transporter KJS28_RS07855 PF00664 ABC transporter transmembrane region KJS28_RS07855 PF00005 ABC transporter KJS28_RS07885 PF00210 Ferritin-like domain KJS28_RS07895 PF00581 Rhodanese-like domain KJS28_RS07895 PF12368 Rhodanase C-terminal KJS28_RS07895 PF17773 UPF0176 acylphosphatase like domain KJS28_RS07905 PF00085 Thioredoxin KJS28_RS07915 PF00258 Flavodoxin KJS28_RS07915 PF00753 Metallo-beta-lactamase superfamily KJS28_RS07925 PF00268 Ribonucleotide reductase, small chain KJS28_RS07930 PF03477 ATP cone domain KJS28_RS07930 PF02867 Ribonucleotide reductase, barrel domain KJS28_RS07930 PF00317 Ribonucleotide reductase, all-alpha domain KJS28_RS07935 PF00258 Flavodoxin KJS28_RS07935 PF00753 Metallo-beta-lactamase superfamily KJS28_RS07940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KJS28_RS07940 PF02770 Acyl-CoA dehydrogenase, middle domain KJS28_RS07940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KJS28_RS07950 PF04607 Region found in RelA / SpoT proteins KJS28_RS07955 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS07955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJS28_RS07960 PF00085 Thioredoxin KJS28_RS07980 PF00301 Rubredoxin KJS28_RS07990 PF06397 Desulfoferrodoxin, N-terminal domain KJS28_RS07990 PF01880 Desulfoferrodoxin KJS28_RS07995 PF02915 Rubrerythrin KJS28_RS08005 PF02001 Protein of unknown function DUF134 KJS28_RS08015 PF07883 Cupin domain KJS28_RS08015 PF01381 Helix-turn-helix KJS28_RS08030 PF17841 BID domain of Bartonella effector protein (Bep) KJS28_RS08030 PF03389 MobA/MobL family KJS28_RS08030 PF01443 Viral (Superfamily 1) RNA helicase KJS28_RS08130 PF01451 Low molecular weight phosphotyrosine protein phosphatase KJS28_RS08150 PF00072 Response regulator receiver domain KJS28_RS08150 PF01627 Hpt domain KJS28_RS08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 KJS28_RS08150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS08150 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS08155 PF01938 TRAM domain KJS28_RS08155 PF05958 tRNA (Uracil-5-)-methyltransferase KJS28_RS08165 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KJS28_RS08165 PF00753 Metallo-beta-lactamase superfamily KJS28_RS08165 PF10996 Beta-Casp domain KJS28_RS08200 PF02554 Carbon starvation protein CstA KJS28_RS08220 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KJS28_RS08220 PF10371 Domain of unknown function KJS28_RS08220 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KJS28_RS08220 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KJS28_RS08220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJS28_RS08225 PF00920 Dehydratase family KJS28_RS08230 PF09339 IclR helix-turn-helix domain KJS28_RS08230 PF01614 Bacterial transcriptional regulator KJS28_RS08245 PF02447 GntP family permease KJS28_RS08250 PF00009 Elongation factor Tu GTP binding domain KJS28_RS08250 PF03144 Elongation factor Tu domain 2 KJS28_RS08250 PF03143 Elongation factor Tu C-terminal domain KJS28_RS08255 PF03144 Elongation factor Tu domain 2 KJS28_RS08255 PF00009 Elongation factor Tu GTP binding domain KJS28_RS08255 PF00679 Elongation factor G C-terminus KJS28_RS08255 PF03764 Elongation factor G, domain IV KJS28_RS08255 PF14492 Elongation Factor G, domain II KJS28_RS08260 PF00177 Ribosomal protein S7p/S5e KJS28_RS08265 PF00164 Ribosomal protein S12/S23 KJS28_RS08275 PF01979 Amidohydrolase family KJS28_RS08285 PF04227 Indigoidine synthase A like protein KJS28_RS08290 PF00294 pfkB family carbohydrate kinase KJS28_RS08295 PF01336 OB-fold nucleic acid binding domain KJS28_RS08295 PF00152 tRNA synthetases class II (D, K and N) KJS28_RS08305 PF00501 AMP-binding enzyme KJS28_RS08305 PF13193 AMP-binding enzyme C-terminal domain KJS28_RS08310 PF08348 YheO-like PAS domain KJS28_RS08310 PF13309 HTH domain KJS28_RS08315 PF00085 Thioredoxin KJS28_RS08330 PF00005 ABC transporter KJS28_RS08340 PF00285 Citrate synthase, C-terminal domain KJS28_RS08345 PF00694 Aconitase C-terminal domain KJS28_RS08345 PF00330 Aconitase family (aconitate hydratase) KJS28_RS08350 PF00180 Isocitrate/isopropylmalate dehydrogenase KJS28_RS08355 PF02690 Na+/Pi-cotransporter KJS28_RS08360 PF00860 Permease family KJS28_RS08370 PF02785 Biotin carboxylase C-terminal domain KJS28_RS08370 PF00289 Biotin carboxylase, N-terminal domain KJS28_RS08370 PF00364 Biotin-requiring enzyme KJS28_RS08370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KJS28_RS08370 PF00682 HMGL-like KJS28_RS08370 PF02436 Conserved carboxylase domain KJS28_RS08375 PF00005 ABC transporter KJS28_RS08380 PF00005 ABC transporter KJS28_RS08380 PF12399 Branched-chain amino acid ATP-binding cassette transporter KJS28_RS08385 PF11862 Domain of unknown function (DUF3382) KJS28_RS08385 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS08390 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS08395 PF13458 Periplasmic binding protein KJS28_RS08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS08415 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS08465 PF01479 S4 domain KJS28_RS08465 PF00849 RNA pseudouridylate synthase KJS28_RS08470 PF02073 Thermophilic metalloprotease (M29) KJS28_RS08475 PF09269 Domain of unknown function (DUF1967) KJS28_RS08475 PF01018 GTP1/OBG KJS28_RS08475 PF01926 50S ribosome-binding GTPase KJS28_RS08490 PF01580 FtsK/SpoIIIE family KJS28_RS08490 PF09397 Ftsk gamma domain KJS28_RS08490 PF17854 FtsK alpha domain KJS28_RS08495 PF02673 Bacitracin resistance protein BacA KJS28_RS08500 PF18277 AbrB C-terminal domain KJS28_RS08500 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KJS28_RS08505 PF07670 Nucleoside recognition KJS28_RS08510 PF07670 Nucleoside recognition KJS28_RS08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS08520 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS08520 PF00989 PAS fold KJS28_RS08520 PF16736 Single Cache-like KJS28_RS08525 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS08525 PF00072 Response regulator receiver domain KJS28_RS08530 PF01895 PhoU domain KJS28_RS08535 PF00005 ABC transporter KJS28_RS08540 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS08550 PF12849 PBP superfamily domain KJS28_RS08560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJS28_RS08560 PF03466 LysR substrate binding domain KJS28_RS08575 PF01471 Putative peptidoglycan binding domain KJS28_RS08575 PF01520 N-acetylmuramoyl-L-alanine amidase KJS28_RS08585 PF01479 S4 domain KJS28_RS08585 PF00849 RNA pseudouridylate synthase KJS28_RS08590 PF05651 Putative sugar diacid recognition KJS28_RS08590 PF17853 GGDEF-like domain KJS28_RS08590 PF13556 PucR C-terminal helix-turn-helix domain KJS28_RS08610 PF03448 MgtE intracellular N domain KJS28_RS08610 PF00571 CBS domain KJS28_RS08610 PF01769 Divalent cation transporter KJS28_RS08615 PF00005 ABC transporter KJS28_RS08620 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS08625 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS08670 PF02562 PhoH-like protein KJS28_RS08675 PF02130 Uncharacterized protein family UPF0054 KJS28_RS08685 PF07650 KH domain KJS28_RS08685 PF01926 50S ribosome-binding GTPase KJS28_RS08690 PF02565 Recombination protein O C terminal KJS28_RS08690 PF11967 Recombination protein O N terminal KJS28_RS08695 PF00488 MutS domain V KJS28_RS08695 PF01713 Smr domain KJS28_RS08700 PF00381 PTS HPr component phosphorylation site KJS28_RS08710 PF06971 Putative DNA-binding protein N-terminus KJS28_RS08710 PF02629 CoA binding domain KJS28_RS08720 PF00580 UvrD/REP helicase N-terminal domain KJS28_RS08720 PF13361 UvrD-like helicase C-terminal domain KJS28_RS08725 PF01555 DNA methylase KJS28_RS08740 PF12167 Arm DNA-binding domain KJS28_RS08740 PF00589 Phage integrase family KJS28_RS08780 PF01717 Cobalamin-independent synthase, Catalytic domain KJS28_RS08790 PF01554 MatE KJS28_RS08805 PF00881 Nitroreductase family KJS28_RS08810 PF00571 CBS domain KJS28_RS08810 PF03448 MgtE intracellular N domain KJS28_RS08810 PF01769 Divalent cation transporter KJS28_RS08825 PF04542 Sigma-70 region 2 KJS28_RS08825 PF08281 Sigma-70, region 4 KJS28_RS08830 PF12791 Anti-sigma factor N-terminus KJS28_RS08830 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain KJS28_RS08840 PF01979 Amidohydrolase family KJS28_RS08845 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KJS28_RS08845 PF00970 Oxidoreductase FAD-binding domain KJS28_RS08850 PF01180 Dihydroorotate dehydrogenase KJS28_RS08855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KJS28_RS08860 PF13419 Haloacid dehalogenase-like hydrolase KJS28_RS08865 PF00156 Phosphoribosyl transferase domain KJS28_RS08870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KJS28_RS08870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJS28_RS08875 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain KJS28_RS08875 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain KJS28_RS08880 PF01869 BadF/BadG/BcrA/BcrD ATPase family KJS28_RS08885 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component KJS28_RS08890 PF00155 Aminotransferase class I and II KJS28_RS08895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS08905 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS08905 PF12911 N-terminal TM domain of oligopeptide transport permease C KJS28_RS08910 PF00005 ABC transporter KJS28_RS08910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS08915 PF00005 ABC transporter KJS28_RS08915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS08925 PF03553 Na+/H+ antiporter family KJS28_RS08930 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS08930 PF00072 Response regulator receiver domain KJS28_RS08945 PF08486 Stage II sporulation protein KJS28_RS08950 PF01434 Peptidase family M41 KJS28_RS08950 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS08950 PF17862 AAA+ lid domain KJS28_RS08950 PF06480 FtsH Extracellular KJS28_RS08970 PF00005 ABC transporter KJS28_RS08970 PF17912 MalK OB fold domain KJS28_RS08970 PF03459 TOBE domain KJS28_RS08975 PF12897 Alanine-glyoxylate amino-transferase KJS28_RS08980 PF00795 Carbon-nitrogen hydrolase KJS28_RS08995 PF12850 Calcineurin-like phosphoesterase superfamily domain KJS28_RS09000 PF01261 Xylose isomerase-like TIM barrel KJS28_RS09010 PF04055 Radical SAM superfamily KJS28_RS09010 PF11842 Domain of unknown function (DUF3362) KJS28_RS09010 PF08497 Radical SAM N-terminal KJS28_RS09015 PF00300 Histidine phosphatase superfamily (branch 1) KJS28_RS09040 PF00011 Hsp20/alpha crystallin family KJS28_RS09045 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS09045 PF00072 Response regulator receiver domain KJS28_RS09050 PF00672 HAMP domain KJS28_RS09050 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS09050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS09055 PF13180 PDZ domain KJS28_RS09075 PF01488 Shikimate / quinate 5-dehydrogenase KJS28_RS09075 PF08501 Shikimate dehydrogenase substrate binding domain KJS28_RS09075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KJS28_RS09080 PF01220 Dehydroquinase class II KJS28_RS09085 PF01202 Shikimate kinase KJS28_RS09095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KJS28_RS09100 PF01761 3-dehydroquinate synthase KJS28_RS09110 PF00485 Phosphoribulokinase / Uridine kinase family KJS28_RS09125 PF02417 Chromate transporter KJS28_RS09130 PF02237 Biotin protein ligase C terminal domain KJS28_RS09130 PF03099 Biotin/lipoate A/B protein ligase family KJS28_RS09130 PF08279 HTH domain KJS28_RS09135 PF02632 BioY family KJS28_RS09140 PF00860 Permease family KJS28_RS09145 PF01554 MatE KJS28_RS09155 PF03167 Uracil DNA glycosylase superfamily KJS28_RS09170 PF00005 ABC transporter KJS28_RS09170 PF00664 ABC transporter transmembrane region KJS28_RS09175 PF00005 ABC transporter KJS28_RS09175 PF00664 ABC transporter transmembrane region KJS28_RS09180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KJS28_RS09180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KJS28_RS09190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KJS28_RS09190 PF00437 Type II/IV secretion system protein KJS28_RS09195 PF00482 Type II secretion system (T2SS), protein F KJS28_RS09200 PF07963 Prokaryotic N-terminal methylation motif KJS28_RS09200 PF00114 Pilin (bacterial filament) KJS28_RS09205 PF06750 Bacterial Peptidase A24 N-terminal domain KJS28_RS09205 PF01478 Type IV leader peptidase family KJS28_RS09245 PF13333 Integrase core domain KJS28_RS09245 PF00665 Integrase core domain KJS28_RS09245 PF13276 HTH-like domain KJS28_RS09270 PF02810 SEC-C motif KJS28_RS09270 PF07517 SecA DEAD-like domain KJS28_RS09270 PF01043 SecA preprotein cross-linking domain KJS28_RS09270 PF07516 SecA Wing and Scaffold domain KJS28_RS09275 PF02578 Multi-copper polyphenol oxidoreductase laccase KJS28_RS09285 PF01726 LexA DNA binding domain KJS28_RS09285 PF00717 Peptidase S24-like KJS28_RS09295 PF11738 Protein of unknown function (DUF3298) KJS28_RS09295 PF01522 Polysaccharide deacetylase KJS28_RS09295 PF13739 Deacetylase PdaC KJS28_RS09305 PF01196 Ribosomal protein L17 KJS28_RS09310 PF01000 RNA polymerase Rpb3/RpoA insert domain KJS28_RS09310 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KJS28_RS09310 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KJS28_RS09315 PF00163 Ribosomal protein S4/S9 N-terminal domain KJS28_RS09315 PF01479 S4 domain KJS28_RS09320 PF00411 Ribosomal protein S11 KJS28_RS09325 PF00416 Ribosomal protein S13/S18 KJS28_RS09330 PF00444 Ribosomal protein L36 KJS28_RS09335 PF01176 Translation initiation factor 1A / IF-1 KJS28_RS09345 PF00557 Metallopeptidase family M24 KJS28_RS09350 PF05191 Adenylate kinase, active site lid KJS28_RS09355 PF00344 SecY translocase KJS28_RS09360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KJS28_RS09365 PF00327 Ribosomal protein L30p/L7e KJS28_RS09370 PF03719 Ribosomal protein S5, C-terminal domain KJS28_RS09370 PF00333 Ribosomal protein S5, N-terminal domain KJS28_RS09375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KJS28_RS09380 PF00347 Ribosomal protein L6 KJS28_RS09385 PF00410 Ribosomal protein S8 KJS28_RS09390 PF00253 Ribosomal protein S14p/S29e KJS28_RS09395 PF00673 ribosomal L5P family C-terminus KJS28_RS09395 PF00281 Ribosomal protein L5 KJS28_RS09400 PF00467 KOW motif KJS28_RS09400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KJS28_RS09405 PF00238 Ribosomal protein L14p/L23e KJS28_RS09410 PF00366 Ribosomal protein S17 KJS28_RS09415 PF00831 Ribosomal L29 protein KJS28_RS09420 PF00252 Ribosomal protein L16p/L10e KJS28_RS09425 PF07650 KH domain KJS28_RS09425 PF00189 Ribosomal protein S3, C-terminal domain KJS28_RS09430 PF00237 Ribosomal protein L22p/L17e KJS28_RS09435 PF00203 Ribosomal protein S19 KJS28_RS09440 PF00181 Ribosomal Proteins L2, RNA binding domain KJS28_RS09440 PF03947 Ribosomal Proteins L2, C-terminal domain KJS28_RS09445 PF00276 Ribosomal protein L23 KJS28_RS09450 PF00573 Ribosomal protein L4/L1 family KJS28_RS09455 PF00297 Ribosomal protein L3 KJS28_RS09460 PF00338 Ribosomal protein S10p/S20e KJS28_RS09465 PF09180 Prolyl-tRNA synthetase, C-terminal KJS28_RS09465 PF03129 Anticodon binding domain KJS28_RS09465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJS28_RS09470 PF00664 ABC transporter transmembrane region KJS28_RS09470 PF00005 ABC transporter KJS28_RS09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KJS28_RS09475 PF03466 LysR substrate binding domain KJS28_RS09485 PF00037 4Fe-4S binding domain KJS28_RS09495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KJS28_RS09505 PF17191 RecG wedge domain KJS28_RS09505 PF00270 DEAD/DEAH box helicase KJS28_RS09505 PF00271 Helicase conserved C-terminal domain KJS28_RS09510 PF01544 CorA-like Mg2+ transporter protein KJS28_RS09525 PF00009 Elongation factor Tu GTP binding domain KJS28_RS09525 PF00679 Elongation factor G C-terminus KJS28_RS09525 PF03144 Elongation factor Tu domain 2 KJS28_RS09525 PF06421 GTP-binding protein LepA C-terminus KJS28_RS09535 PF05848 CtsR N-terminal HTH domain KJS28_RS09535 PF17727 CtsR C-terminal dimerization domain KJS28_RS09545 PF17871 AAA lid domain KJS28_RS09545 PF07724 AAA domain (Cdc48 subfamily) KJS28_RS09545 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS09545 PF10431 C-terminal, D2-small domain, of ClpB protein KJS28_RS09545 PF02861 Clp amino terminal domain, pathogenicity island component KJS28_RS09550 PF02887 Pyruvate kinase, alpha/beta domain KJS28_RS09550 PF00391 PEP-utilising enzyme, mobile domain KJS28_RS09550 PF00224 Pyruvate kinase, barrel domain KJS28_RS09560 PF02653 Branched-chain amino acid transport system / permease component KJS28_RS09565 PF00005 ABC transporter KJS28_RS09570 PF01479 S4 domain KJS28_RS09570 PF00849 RNA pseudouridylate synthase KJS28_RS09575 PF01252 Signal peptidase (SPase) II KJS28_RS09585 PF00919 Uncharacterized protein family UPF0004 KJS28_RS09585 PF01938 TRAM domain KJS28_RS09585 PF04055 Radical SAM superfamily KJS28_RS09590 PF00488 MutS domain V KJS28_RS09590 PF05192 MutS domain III KJS28_RS09590 PF05188 MutS domain II KJS28_RS09590 PF01624 MutS domain I KJS28_RS09590 PF05190 MutS family domain IV KJS28_RS09595 PF08676 MutL C terminal dimerisation domain KJS28_RS09595 PF01119 DNA mismatch repair protein, C-terminal domain KJS28_RS09605 PF17209 Hfq protein KJS28_RS09615 PF01168 Alanine racemase, N-terminal domain KJS28_RS09620 PF04472 Cell division protein SepF KJS28_RS09640 PF01048 Phosphorylase superfamily KJS28_RS09650 PF03553 Na+/H+ antiporter family KJS28_RS09655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KJS28_RS09655 PF13378 Enolase C-terminal domain-like KJS28_RS09660 PF04552 Sigma-54, DNA binding domain KJS28_RS09660 PF04963 Sigma-54 factor, core binding domain KJS28_RS09660 PF00309 Sigma-54 factor, Activator interacting domain (AID) KJS28_RS09665 PF00113 Enolase, C-terminal TIM barrel domain KJS28_RS09665 PF03952 Enolase, N-terminal domain KJS28_RS09675 PF00158 Sigma-54 interaction domain KJS28_RS09675 PF13426 PAS domain KJS28_RS09675 PF02954 Bacterial regulatory protein, Fis family KJS28_RS09680 PF01337 Barstar (barnase inhibitor) KJS28_RS09700 PF00768 D-alanyl-D-alanine carboxypeptidase KJS28_RS09700 PF07943 Penicillin-binding protein 5, C-terminal domain KJS28_RS09705 PF00342 Phosphoglucose isomerase KJS28_RS09715 PF03061 Thioesterase superfamily KJS28_RS09720 PF00082 Subtilase family KJS28_RS09720 PF02225 PA domain KJS28_RS09720 PF00746 LPXTG cell wall anchor motif KJS28_RS09720 PF06280 Fn3-like domain KJS28_RS09740 PF08245 Mur ligase middle domain KJS28_RS09740 PF08353 Domain of unknown function (DUF1727) KJS28_RS09750 PF13932 GidA associated domain KJS28_RS09750 PF01134 Glucose inhibited division protein A KJS28_RS09785 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS09785 PF04324 BFD-like [2Fe-2S] binding domain KJS28_RS09790 PF01266 FAD dependent oxidoreductase KJS28_RS09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS09795 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS09795 PF02702 Osmosensitive K+ channel His kinase sensor domain KJS28_RS09795 PF13493 Domain of unknown function (DUF4118) KJS28_RS09800 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS09800 PF00072 Response regulator receiver domain KJS28_RS09810 PF03553 Na+/H+ antiporter family KJS28_RS09815 PF03553 Na+/H+ antiporter family KJS28_RS09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS09825 PF13492 GAF domain KJS28_RS09825 PF07694 5TMR of 5TMR-LYT KJS28_RS09825 PF06580 Histidine kinase KJS28_RS09830 PF01042 Endoribonuclease L-PSP KJS28_RS09865 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KJS28_RS09895 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS09895 PF00589 Phage integrase family KJS28_RS09905 PF00398 Ribosomal RNA adenine dimethylase KJS28_RS09940 PF06949 Protein of unknown function (DUF1292) KJS28_RS09945 PF01435 Peptidase family M48 KJS28_RS09950 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS09985 PF01131 DNA topoisomerase KJS28_RS09985 PF01751 Toprim domain KJS28_RS10000 PF08275 DNA primase catalytic core, N-terminal domain KJS28_RS10000 PF01807 CHC2 zinc finger KJS28_RS10050 PF01751 Toprim domain KJS28_RS10050 PF01131 DNA topoisomerase KJS28_RS10055 PF13173 AAA domain KJS28_RS10055 PF13635 Domain of unknown function (DUF4143) KJS28_RS10070 PF00877 NlpC/P60 family KJS28_RS10125 PF03389 MobA/MobL family KJS28_RS10125 PF17841 BID domain of Bartonella effector protein (Bep) KJS28_RS10125 PF01443 Viral (Superfamily 1) RNA helicase KJS28_RS10180 PF17762 HTH domain found in ParB protein KJS28_RS10180 PF02195 ParB-like nuclease domain KJS28_RS10185 PF13614 AAA domain KJS28_RS10250 PF00145 C-5 cytosine-specific DNA methylase KJS28_RS10255 PF00877 NlpC/P60 family KJS28_RS10270 PF01751 Toprim domain KJS28_RS10270 PF01131 DNA topoisomerase KJS28_RS10300 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS10310 PF12833 Helix-turn-helix domain KJS28_RS10325 PF00005 ABC transporter KJS28_RS10330 PF00664 ABC transporter transmembrane region KJS28_RS10330 PF00005 ABC transporter KJS28_RS10330 PF08021 Siderophore-interacting FAD-binding domain KJS28_RS10330 PF04954 Siderophore-interacting protein KJS28_RS10335 PF00005 ABC transporter KJS28_RS10335 PF00664 ABC transporter transmembrane region KJS28_RS10340 PF01325 Iron dependent repressor, N-terminal DNA binding domain KJS28_RS10340 PF02742 Iron dependent repressor, metal binding and dimerisation domain KJS28_RS10340 PF18357 Diphteria toxin repressor SH3 domain KJS28_RS10375 PF17862 AAA+ lid domain KJS28_RS10375 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS10375 PF01434 Peptidase family M41 KJS28_RS10375 PF06480 FtsH Extracellular KJS28_RS10380 PF10502 Signal peptidase, peptidase S26 KJS28_RS10385 PF01171 PP-loop family KJS28_RS10385 PF00156 Phosphoribosyl transferase domain KJS28_RS10385 PF11734 TilS substrate C-terminal domain KJS28_RS10390 PF01171 PP-loop family KJS28_RS10390 PF11734 TilS substrate C-terminal domain KJS28_RS10395 PF00772 DnaB-like helicase N terminal domain KJS28_RS10395 PF03796 DnaB-like helicase C terminal domain KJS28_RS10400 PF03948 Ribosomal protein L9, C-terminal domain KJS28_RS10400 PF01281 Ribosomal protein L9, N-terminal domain KJS28_RS10405 PF01368 DHH family KJS28_RS10405 PF02272 DHHA1 domain KJS28_RS10410 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KJS28_RS10410 PF00753 Metallo-beta-lactamase superfamily KJS28_RS10410 PF17770 Ribonuclease J C-terminal domain KJS28_RS10435 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KJS28_RS10440 PF01638 HxlR-like helix-turn-helix KJS28_RS10445 PF01810 LysE type translocator KJS28_RS10450 PF02667 Short chain fatty acid transporter KJS28_RS10495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KJS28_RS10505 PF13180 PDZ domain KJS28_RS10515 PF00690 Cation transporter/ATPase, N-terminus KJS28_RS10515 PF00689 Cation transporting ATPase, C-terminus KJS28_RS10535 PF00155 Aminotransferase class I and II KJS28_RS10545 PF00156 Phosphoribosyl transferase domain KJS28_RS10550 PF13538 UvrD-like helicase C-terminal domain KJS28_RS10550 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KJS28_RS10550 PF14490 Helix-hairpin-helix containing domain KJS28_RS10560 PF17760 UvrA interaction domain KJS28_RS10560 PF17755 UvrA DNA-binding domain KJS28_RS10570 PF04073 Aminoacyl-tRNA editing domain KJS28_RS10585 PF00271 Helicase conserved C-terminal domain KJS28_RS10585 PF04851 Type III restriction enzyme, res subunit KJS28_RS10585 PF02151 UvrB/uvrC motif KJS28_RS10585 PF12344 Ultra-violet resistance protein B KJS28_RS10585 PF17757 UvrB interaction domain KJS28_RS10590 PF04002 RadC-like JAB domain KJS28_RS10600 PF01048 Phosphorylase superfamily KJS28_RS10605 PF01791 DeoC/LacD family aldolase KJS28_RS10610 PF01926 50S ribosome-binding GTPase KJS28_RS10610 PF06071 Protein of unknown function (DUF933) KJS28_RS10615 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS10615 PF00589 Phage integrase family KJS28_RS10625 PF01695 IstB-like ATP binding protein KJS28_RS10645 PF01555 DNA methylase KJS28_RS10645 PF18273 Type III R-M EcoP15I C-terminal domain KJS28_RS10660 PF13676 TIR domain KJS28_RS10665 PF13173 AAA domain KJS28_RS10665 PF13635 Domain of unknown function (DUF4143) KJS28_RS10675 PF00589 Phage integrase family KJS28_RS10675 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS10685 PF01594 AI-2E family transporter KJS28_RS10690 PF02080 TrkA-C domain KJS28_RS10690 PF02254 TrkA-N domain KJS28_RS10695 PF02386 Cation transport protein KJS28_RS10700 PF03471 Transporter associated domain KJS28_RS10700 PF00571 CBS domain KJS28_RS10700 PF01595 Cyclin M transmembrane N-terminal domain KJS28_RS10705 PF13493 Domain of unknown function (DUF4118) KJS28_RS10705 PF02702 Osmosensitive K+ channel His kinase sensor domain KJS28_RS10705 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS10710 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS10710 PF00072 Response regulator receiver domain KJS28_RS10730 PF00005 ABC transporter KJS28_RS10735 PF01032 FecCD transport family KJS28_RS10780 PF04997 RNA polymerase Rpb1, domain 1 KJS28_RS10780 PF00623 RNA polymerase Rpb1, domain 2 KJS28_RS10780 PF04983 RNA polymerase Rpb1, domain 3 KJS28_RS10780 PF05000 RNA polymerase Rpb1, domain 4 KJS28_RS10780 PF04998 RNA polymerase Rpb1, domain 5 KJS28_RS10785 PF04565 RNA polymerase Rpb2, domain 3 KJS28_RS10785 PF10385 RNA polymerase beta subunit external 1 domain KJS28_RS10785 PF04561 RNA polymerase Rpb2, domain 2 KJS28_RS10785 PF04563 RNA polymerase beta subunit KJS28_RS10785 PF00562 RNA polymerase Rpb2, domain 6 KJS28_RS10785 PF04560 RNA polymerase Rpb2, domain 7 KJS28_RS10790 PF08264 Anticodon-binding domain of tRNA KJS28_RS10790 PF09334 tRNA synthetases class I (M) KJS28_RS10790 PF01588 Putative tRNA binding domain KJS28_RS10795 PF03372 Endonuclease/Exonuclease/phosphatase family KJS28_RS10800 PF00871 Acetokinase family KJS28_RS10820 PF00873 AcrB/AcrD/AcrF family KJS28_RS10835 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KJS28_RS10835 PF01676 Metalloenzyme superfamily KJS28_RS10840 PF00121 Triosephosphate isomerase KJS28_RS10845 PF00162 Phosphoglycerate kinase KJS28_RS10850 PF00588 SpoU rRNA Methylase family KJS28_RS10855 PF00132 Bacterial transferase hexapeptide (six repeats) KJS28_RS10855 PF00483 Nucleotidyl transferase KJS28_RS10860 PF14572 Phosphoribosyl synthetase-associated domain KJS28_RS10860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KJS28_RS10865 PF04371 Porphyromonas-type peptidyl-arginine deiminase KJS28_RS10870 PF13520 Amino acid permease KJS28_RS10885 PF02734 DAK2 domain KJS28_RS10885 PF13684 Dihydroxyacetone kinase family KJS28_RS10905 PF03313 Serine dehydratase alpha chain KJS28_RS10920 PF00258 Flavodoxin KJS28_RS10925 PF01926 50S ribosome-binding GTPase KJS28_RS10925 PF12631 MnmE helical domain KJS28_RS10925 PF10396 GTP-binding protein TrmE N-terminus KJS28_RS10930 PF02645 Uncharacterised protein, DegV family COG1307 KJS28_RS10940 PF04294 VanW like protein KJS28_RS10945 PF17762 HTH domain found in ParB protein KJS28_RS10945 PF02195 ParB-like nuclease domain KJS28_RS10965 PF05164 Cell division protein ZapA KJS28_RS10970 PF01136 Peptidase family U32 KJS28_RS10980 PF00692 dUTPase KJS28_RS10985 PF02545 Maf-like protein KJS28_RS10990 PF04085 rod shape-determining protein MreC KJS28_RS11000 PF03717 Penicillin-binding Protein dimerisation domain KJS28_RS11000 PF00905 Penicillin binding protein transpeptidase domain KJS28_RS11005 PF02903 Alpha amylase, N-terminal ig-like domain KJS28_RS11005 PF00128 Alpha amylase, catalytic domain KJS28_RS11010 PF13614 AAA domain KJS28_RS11015 PF02195 ParB-like nuclease domain KJS28_RS11015 PF17762 HTH domain found in ParB protein KJS28_RS11020 PF02403 Seryl-tRNA synthetase N-terminal domain KJS28_RS11020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJS28_RS11025 PF01741 Large-conductance mechanosensitive channel, MscL KJS28_RS11030 PF02527 rRNA small subunit methyltransferase G KJS28_RS11035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KJS28_RS11040 PF02142 MGS-like domain KJS28_RS11045 PF03129 Anticodon binding domain KJS28_RS11045 PF13393 Histidyl-tRNA synthetase KJS28_RS11050 PF00152 tRNA synthetases class II (D, K and N) KJS28_RS11050 PF01336 OB-fold nucleic acid binding domain KJS28_RS11050 PF02938 GAD domain KJS28_RS11055 PF03129 Anticodon binding domain KJS28_RS11055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KJS28_RS11065 PF01554 MatE KJS28_RS11070 PF02540 NAD synthase KJS28_RS11070 PF00795 Carbon-nitrogen hydrolase KJS28_RS11075 PF01649 Ribosomal protein S20 KJS28_RS11080 PF03418 Germination protease KJS28_RS11085 PF02272 DHHA1 domain KJS28_RS11085 PF01411 tRNA synthetases class II (A) KJS28_RS11085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KJS28_RS11090 PF00075 RNase H KJS28_RS11095 PF18389 TrmO C-terminal domain KJS28_RS11095 PF01980 tRNA-methyltransferase O KJS28_RS11105 PF00521 DNA gyrase/topoisomerase IV, subunit A KJS28_RS11105 PF03989 DNA gyrase C-terminal domain, beta-propeller KJS28_RS11110 PF00204 DNA gyrase B KJS28_RS11110 PF00986 DNA gyrase B subunit, carboxyl terminus KJS28_RS11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS11110 PF01751 Toprim domain KJS28_RS11120 PF02463 RecF/RecN/SMC N terminal domain KJS28_RS11130 PF00712 DNA polymerase III beta subunit, N-terminal domain KJS28_RS11130 PF02767 DNA polymerase III beta subunit, central domain KJS28_RS11130 PF02768 DNA polymerase III beta subunit, C-terminal domain KJS28_RS11135 PF11638 DnaA N-terminal domain KJS28_RS11135 PF00308 Bacterial dnaA protein KJS28_RS11135 PF08299 Bacterial dnaA protein helix-turn-helix KJS28_RS11140 PF00468 Ribosomal protein L34 KJS28_RS11145 PF00825 Ribonuclease P KJS28_RS11150 PF01809 Putative membrane protein insertion efficiency factor KJS28_RS11155 PF02096 60Kd inner membrane protein KJS28_RS11155 PF14849 YidC periplasmic domain KJS28_RS11165 PF00013 KH domain KJS28_RS11165 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KJS28_RS11165 PF01138 3' exoribonuclease family, domain 1 KJS28_RS11165 PF03725 3' exoribonuclease family, domain 2 KJS28_RS11165 PF00575 S1 RNA binding domain KJS28_RS11170 PF00312 Ribosomal protein S15 KJS28_RS11180 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS11185 PF00005 ABC transporter KJS28_RS11200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KJS28_RS11200 PF10371 Domain of unknown function KJS28_RS11200 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KJS28_RS11200 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KJS28_RS11200 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KJS28_RS11205 PF01078 Magnesium chelatase, subunit ChlI KJS28_RS11205 PF13335 Magnesium chelatase, subunit ChlI C-terminal KJS28_RS11210 PF02926 THUMP domain KJS28_RS11210 PF02568 Thiamine biosynthesis protein (ThiI) KJS28_RS11215 PF02464 Competence-damaged protein KJS28_RS11215 PF00994 Probable molybdopterin binding domain KJS28_RS11215 PF18146 Damage-inducible protein CinA KH domain KJS28_RS11225 PF08264 Anticodon-binding domain of tRNA KJS28_RS11225 PF00133 tRNA synthetases class I (I, L, M and V) KJS28_RS11225 PF06827 Zinc finger found in FPG and IleRS KJS28_RS11245 PF00152 tRNA synthetases class II (D, K and N) KJS28_RS11245 PF01336 OB-fold nucleic acid binding domain KJS28_RS11250 PF01272 Transcription elongation factor, GreA/GreB, C-term KJS28_RS11250 PF03449 Transcription elongation factor, N-terminal KJS28_RS11260 PF01551 Peptidase family M23 KJS28_RS11260 PF04225 Opacity-associated protein A LysM-like domain KJS28_RS11265 PF18075 FtsX extracellular domain KJS28_RS11265 PF02687 FtsX-like permease family KJS28_RS11270 PF00005 ABC transporter KJS28_RS11275 PF00158 Sigma-54 interaction domain KJS28_RS11290 PF05853 beta-keto acid cleavage enzyme KJS28_RS11295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KJS28_RS11295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KJS28_RS11305 PF01144 Coenzyme A transferase KJS28_RS11310 PF01144 Coenzyme A transferase KJS28_RS11315 PF02803 Thiolase, C-terminal domain KJS28_RS11315 PF00108 Thiolase, N-terminal domain KJS28_RS11320 PF00005 ABC transporter KJS28_RS11320 PF00664 ABC transporter transmembrane region KJS28_RS11325 PF00664 ABC transporter transmembrane region KJS28_RS11325 PF00005 ABC transporter KJS28_RS11330 PF07683 Cobalamin synthesis protein cobW C-terminal domain KJS28_RS11330 PF02492 CobW/HypB/UreG, nucleotide-binding domain KJS28_RS11375 PF02421 Ferrous iron transport protein B KJS28_RS11375 PF17910 FeoB cytosolic helical domain KJS28_RS11375 PF07670 Nucleoside recognition KJS28_RS11375 PF07664 Ferrous iron transport protein B C terminus KJS28_RS11380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KJS28_RS11380 PF15714 Stage V sporulation protein T C-terminal, transcription factor KJS28_RS11410 PF01638 HxlR-like helix-turn-helix KJS28_RS11420 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS11420 PF00589 Phage integrase family KJS28_RS11435 PF00209 Sodium:neurotransmitter symporter family KJS28_RS11460 PF03061 Thioesterase superfamily KJS28_RS11465 PF00005 ABC transporter KJS28_RS11465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS11470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KJS28_RS11470 PF00005 ABC transporter KJS28_RS11475 PF12911 N-terminal TM domain of oligopeptide transport permease C KJS28_RS11475 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS11480 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS11485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KJS28_RS11490 PF01594 AI-2E family transporter KJS28_RS11495 PF00781 Diacylglycerol kinase catalytic domain KJS28_RS11500 PF01195 Peptidyl-tRNA hydrolase KJS28_RS11505 PF03461 TRCF domain KJS28_RS11505 PF00270 DEAD/DEAH box helicase KJS28_RS11505 PF02559 CarD-like/TRCF domain KJS28_RS11505 PF17757 UvrB interaction domain KJS28_RS11505 PF00271 Helicase conserved C-terminal domain KJS28_RS11515 PF02803 Thiolase, C-terminal domain KJS28_RS11515 PF00108 Thiolase, N-terminal domain KJS28_RS11525 PF01177 Asp/Glu/Hydantoin racemase KJS28_RS11535 PF03485 Arginyl tRNA synthetase N terminal domain KJS28_RS11535 PF05746 DALR anticodon binding domain KJS28_RS11535 PF00750 tRNA synthetases class I (R) KJS28_RS11545 PF01546 Peptidase family M20/M25/M40 KJS28_RS11545 PF07687 Peptidase dimerisation domain KJS28_RS11560 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding KJS28_RS11560 PF01628 HrcA protein C terminal domain KJS28_RS11565 PF01025 GrpE KJS28_RS11575 PF00012 Hsp70 protein KJS28_RS11580 PF00226 DnaJ domain KJS28_RS11580 PF01556 DnaJ C terminal domain KJS28_RS11580 PF00684 DnaJ central domain KJS28_RS11590 PF02502 Ribose/Galactose Isomerase KJS28_RS11605 PF12169 DNA polymerase III subunits gamma and tau domain III KJS28_RS11610 PF02575 YbaB/EbfC DNA-binding family KJS28_RS11615 PF12116 Stage III sporulation protein D KJS28_RS11625 PF00575 S1 RNA binding domain KJS28_RS11625 PF09371 Tex-like protein N-terminal domain KJS28_RS11625 PF16921 Tex protein YqgF-like domain KJS28_RS11625 PF17674 HHH domain KJS28_RS11630 PF08903 Domain of unknown function (DUF1846) KJS28_RS11645 PF00072 Response regulator receiver domain KJS28_RS11645 PF00486 Transcriptional regulatory protein, C terminal KJS28_RS11650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS11650 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS11655 PF07969 Amidohydrolase family KJS28_RS11660 PF00459 Inositol monophosphatase family KJS28_RS11665 PF01476 LysM domain KJS28_RS11665 PF00005 ABC transporter KJS28_RS11670 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KJS28_RS11680 PF04055 Radical SAM superfamily KJS28_RS11680 PF06969 HemN C-terminal domain KJS28_RS11695 PF00265 Thymidine kinase KJS28_RS11700 PF14815 NUDIX domain KJS28_RS11700 PF00730 HhH-GPD superfamily base excision DNA repair protein KJS28_RS11720 PF01751 Toprim domain KJS28_RS11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS11720 PF00204 DNA gyrase B KJS28_RS11720 PF00986 DNA gyrase B subunit, carboxyl terminus KJS28_RS11725 PF00521 DNA gyrase/topoisomerase IV, subunit A KJS28_RS11725 PF03989 DNA gyrase C-terminal domain, beta-propeller KJS28_RS11730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KJS28_RS11730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KJS28_RS11745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KJS28_RS11745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KJS28_RS11750 PF00480 ROK family KJS28_RS11755 PF00294 pfkB family carbohydrate kinase KJS28_RS11765 PF00392 Bacterial regulatory proteins, gntR family KJS28_RS11765 PF07729 FCD domain KJS28_RS11770 PF00005 ABC transporter KJS28_RS11775 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS11785 PF13187 4Fe-4S dicluster domain KJS28_RS11785 PF04060 Putative Fe-S cluster KJS28_RS11785 PF00037 4Fe-4S binding domain KJS28_RS11790 PF02508 Rnf-Nqr subunit, membrane protein KJS28_RS11795 PF02508 Rnf-Nqr subunit, membrane protein KJS28_RS11800 PF04205 FMN-binding domain KJS28_RS11805 PF03116 NQR2, RnfD, RnfE family KJS28_RS11810 PF13375 RnfC Barrel sandwich hybrid domain KJS28_RS11810 PF13237 4Fe-4S dicluster domain KJS28_RS11810 PF10531 SLBB domain KJS28_RS11810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KJS28_RS11830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KJS28_RS11830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KJS28_RS11845 PF00294 pfkB family carbohydrate kinase KJS28_RS11850 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS11850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJS28_RS11855 PF10437 Bacterial lipoate protein ligase C-terminus KJS28_RS11855 PF03099 Biotin/lipoate A/B protein ligase family KJS28_RS11860 PF02347 Glycine cleavage system P-protein KJS28_RS11865 PF02347 Glycine cleavage system P-protein KJS28_RS11870 PF01597 Glycine cleavage H-protein KJS28_RS11875 PF08669 Glycine cleavage T-protein C-terminal barrel domain KJS28_RS11875 PF01571 Aminomethyltransferase folate-binding domain KJS28_RS11905 PF00709 Adenylosuccinate synthetase KJS28_RS11920 PF07963 Prokaryotic N-terminal methylation motif KJS28_RS11920 PF00114 Pilin (bacterial filament) KJS28_RS11925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KJS28_RS11925 PF00391 PEP-utilising enzyme, mobile domain KJS28_RS11925 PF02896 PEP-utilising enzyme, TIM barrel domain KJS28_RS11935 PF04468 PSP1 C-terminal conserved region KJS28_RS11960 PF00005 ABC transporter KJS28_RS11970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) KJS28_RS12000 PF01434 Peptidase family M41 KJS28_RS12000 PF17862 AAA+ lid domain KJS28_RS12000 PF00004 ATPase family associated with various cellular activities (AAA) KJS28_RS12005 PF09827 CRISPR associated protein Cas2 KJS28_RS12010 PF01867 CRISPR associated protein Cas1 KJS28_RS12045 PF00270 DEAD/DEAH box helicase KJS28_RS12045 PF13749 Putative ATP-dependent DNA helicase recG C-terminal KJS28_RS12045 PF17191 RecG wedge domain KJS28_RS12075 PF03432 Relaxase/Mobilisation nuclease domain KJS28_RS12085 PF00589 Phage integrase family KJS28_RS12085 PF14659 Phage integrase, N-terminal SAM-like domain KJS28_RS12090 PF12833 Helix-turn-helix domain KJS28_RS12105 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component KJS28_RS12115 PF08402 TOBE domain KJS28_RS12115 PF00005 ABC transporter KJS28_RS12120 PF02080 TrkA-C domain KJS28_RS12120 PF02254 TrkA-N domain KJS28_RS12130 PF01554 MatE KJS28_RS12135 PF13404 AsnC-type helix-turn-helix domain KJS28_RS12135 PF01037 Lrp/AsnC ligand binding domain KJS28_RS12165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KJS28_RS12165 PF00512 His Kinase A (phospho-acceptor) domain KJS28_RS12170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KJS28_RS12170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KJS28_RS12190 PF00403 Heavy-metal-associated domain KJS28_RS12190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KJS28_RS12190 PF07992 Pyridine nucleotide-disulphide oxidoreductase KJS28_RS12200 PF01168 Alanine racemase, N-terminal domain KJS28_RS12210 PF01797 Transposase IS200 like KJS28_RS12215 PF00465 Iron-containing alcohol dehydrogenase KJS28_RS12230 PF02899 Phage integrase, N-terminal SAM-like domain KJS28_RS12230 PF00589 Phage integrase family KJS28_RS12255 PF10609 NUBPL iron-transfer P-loop NTPase KJS28_RS12320 PF14268 YoaP-like KJS28_RS12320 PF00583 Acetyltransferase (GNAT) family KJS28_RS12330 PF03949 Malic enzyme, NAD binding domain KJS28_RS12330 PF00390 Malic enzyme, N-terminal domain KJS28_RS12335 PF05681 Fumarate hydratase (Fumerase) KJS28_RS12345 PF05544 Proline racemase KJS28_RS12350 PF00158 Sigma-54 interaction domain KJS28_RS12350 PF13426 PAS domain KJS28_RS12350 PF02954 Bacterial regulatory protein, Fis family KJS28_RS12355 PF03553 Na+/H+ antiporter family KJS28_RS12360 PF14698 Argininosuccinate lyase C-terminal KJS28_RS12360 PF00206 Lyase KJS28_RS12375 PF08331 Domain of unknown function (DUF1730) KJS28_RS12380 PF03313 Serine dehydratase alpha chain KJS28_RS12390 PF03553 Na+/H+ antiporter family KJS28_RS12395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KJS28_RS12395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KJS28_RS12565 PF01424 R3H domain KJS28_RS12565 PF14804 Jag N-terminus KJS28_RS12590 PF06414 Zeta toxin KJS28_RS12600 PF00132 Bacterial transferase hexapeptide (six repeats) KJS28_RS12650 PF12852 Cupin KJS28_RS12650 PF12833 Helix-turn-helix domain KJS28_RS12660 PF01119 DNA mismatch repair protein, C-terminal domain KJS28_RS12660 PF08676 MutL C terminal dimerisation domain KJS28_RS12665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KJS28_RS12665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain